BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007881
(586 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/586 (74%), Positives = 508/586 (86%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE I PNDFTFPC FKAS+AL +P GKQ+HA+ALK GQI+D FVGCSAFDMYSKTGL
Sbjct: 49 MRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGL 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
K +A ++FDEMP RN+A WNAYISNAVL GRP AID FI RR GGEPDLITFCAFLNA
Sbjct: 109 KFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNA 168
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L LGRQLHG ++RSGF+G+VSV NG++D YGKC EV LA++VF+G+ +N VSW
Sbjct: 169 CADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSW 228
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
C+M+ QN E+E C +FL R+EG+E D+M+SSV+SA A I+GLE GRSVHA+AVK
Sbjct: 229 CTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVK 288
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVEG+IFVGSALVDMYGKCGSI+D E F++MPERNLV WNA+I GYAHQG DMA++
Sbjct: 289 ACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTL 348
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM S EAV NYVTL+CVLSACSR GAV+ G +IF SM +Y I+PGAEHYAC+ D+
Sbjct: 349 FEEMQS---EAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADM 405
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V+RAYE +++MP+RPTISVWGALLNACRVYG+PELG+IAADNLFKLDP DSGNH
Sbjct: 406 LGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNH 465
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNMFAA GRW+EA LVRKEMKDVGIKKGAGCSW++ KN++H+FQAKDTSHERN+EIQ
Sbjct: 466 VLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQ 525
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML KLR EM+AAGY+PDTN+ALYD+EEEEKMTEVG+HSEKIALAFGLIA+PPGVPIRIT
Sbjct: 526 AMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRIT 585
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCHSAFKFISGIVGRE+IVRDNNRFHRF D CSC D+W
Sbjct: 586 KNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 177/381 (46%), Gaps = 11/381 (2%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYSK L + A + P R + TW A IS +V G +A+ F +RR +P+ T
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 114 F-CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
F CAF + + C L G+Q+H ++ G + V D Y K A+ +FD +
Sbjct: 61 FPCAFKASTALC-LPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+N W + + V + F+ RR G EP + L+ACA L+LGR
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H + +++ EG++ V + ++D+YGKC ++ AE+ FN M RN V W ++
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ A F E V+ V+SA + +E G + +++ +K ++
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVS--SVISAYAGISGLEFGRSV-HALAVKACVEGDIF 296
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF-K 411
+ +VD+ G+ G ++ ++ EMP R +S W A+++ G ++ A LF +
Sbjct: 297 VGSALVDMYGKCGSIEDCEQVFHEMPERNLVS-WNAMISGYAHQGDVDM----AMTLFEE 351
Query: 412 LDPNDSGNHVLLSNMFAATGR 432
+ N+V L + +A R
Sbjct: 352 MQSEAVANYVTLICVLSACSR 372
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/586 (73%), Positives = 506/586 (86%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ I PNDFTFPC FKAS +L P+ GKQ+HALA+K+GQI DVFVGCSAFDMYSK GL
Sbjct: 99 MRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGL 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A KMFDEMPERN+ATWNAY+SN+VL GR +A+ AFI R G EP+LITFCAFLNA
Sbjct: 159 TEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ S L+LGRQLHGF+++SGF+ +VSV NGL+DFYGKC++VG ++++F GI NDVSW
Sbjct: 219 CAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
CSM+V YVQN EEE C +FL AR+EG+EP DFM+SSVLSACA ++ LE+G+SVH +AVK
Sbjct: 279 CSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACV GNIFVGSALVDMYGKCGSI+DAE AF++MPERNLV WNA+IGGYAHQG ADMA++
Sbjct: 339 ACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EMT PNYVT VCVLSACSRAG+V GM+IF SM +YGI+PGAEHYACVVDL
Sbjct: 399 FDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDL 458
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V++AY+ IK+MP+RPT+SVWGALL A +++GK ELG++AADNLF+LDP DSGNH
Sbjct: 459 LGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNH 518
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNMFAA GRWEEA LVRKEMKDVGIKKGAGCSWI+ N +H+FQAKDTSHERN+EIQ
Sbjct: 519 VLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQ 578
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML KLR EM+AAGYIPDT+FAL+D+EEEEK EV +HSEKIALAFGLI+IP GVPIRIT
Sbjct: 579 AMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRIT 638
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCHSA KFISGIVGRE+IVRDNN FHRF D CSC DYW
Sbjct: 639 KNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 201/430 (46%), Gaps = 11/430 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDA 64
+SPN + L +++ + G+ HA +K+ F+ +MYSK + A
Sbjct: 4 LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSD 123
+ P R++ TW A I+ +V GR +A+ F N+RR +P+ TF CAF + S
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S L +G+Q+H V++G +V V D Y K A+ +FD + ++N +W +
Sbjct: 122 RSPL-VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L V ++ F+ R EG EP + L+ACA + L LGR +H +++
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF 240
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E ++ V + L+D YGKC + +EI F+ + + N V W ++I Y + A F
Sbjct: 241 EADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVF-- 298
Query: 304 MTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
R E + P + VLSAC+ +E G K +++ +K + + +VD+ G
Sbjct: 299 -LRARKEGIEPTDFMVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYG 356
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
+ G ++ A EMP R ++ W A++ G+ ++ D + + N+V
Sbjct: 357 KCGSIEDAERAFDEMPERNLVT-WNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVT 415
Query: 423 LSNMFAATGR 432
+ +A R
Sbjct: 416 FVCVLSACSR 425
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/586 (69%), Positives = 487/586 (83%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE ++PNDFTFPC+FKA ++L +PVTGKQ+HALA+K G+I DVFVGCSAFDMY KT L
Sbjct: 99 MRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DDA K+FDE+PERNL TWNAYISN+V GRPK AI+AFI RR GG+P+ ITFC FLNA
Sbjct: 159 RDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD LL LG Q+HG + RSGFD +VSV NGL+DFYGKC ++ ++++F + KN VSW
Sbjct: 219 CSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
CS++ YVQN+E+E ++L +R+E VE DFMISSVLSACA +AGLELGRS+HA AVK
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVE NIFVGSALVDMYGKCG I+D+E AF++MPE+NLV N++IGGYAHQG DMAL+
Sbjct: 339 ACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALAL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M C PNY+T V +LSACSRAGAVE GMKIF SM YGI+PGAEHY+C+VD+
Sbjct: 399 FEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDM 458
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V++A+E IK+MP++PTISVWGAL NACR++GKP LG +AA+NLFKLDP DSGNH
Sbjct: 459 LGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNH 518
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN FAA GRW EA+ VR+EMK VGIKKGAG SWI+VKN++H FQAKD SH+ N EIQ
Sbjct: 519 VLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQ 578
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
MLTKLR +M+AAGY PD +LYD+EEEEK EV HHSEK+ALAFGL+A+P VPIRIT
Sbjct: 579 TMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRIT 638
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCHS FKF+SG V RE+IVRDNNRFHRF DG CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 4/358 (1%)
Query: 29 GKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ +HA +K+ F+ +MYSK + A + P RN+ +W + +S
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLA 84
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A+ F +RR G P+ TF A + L G+Q+H V+ G +V
Sbjct: 85 QNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V D Y K A+ +FD I ++N +W + + V + + + F+ RR G
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIG 204
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P L+AC+ L+LG +H + ++ + ++ V + L+D YGKC I+ +E
Sbjct: 205 GQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSE 264
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I F +M +N V W +++ Y Q H D S + +++ + VLSAC+
Sbjct: 265 IIFAEMGMKNAVSWCSLVAAYV-QNHEDEKASVLYLRSRKEIVETSDFM-ISSVLSACAG 322
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+E G I ++ +K ++ + +VD+ G+ G ++ + + EMP + +++
Sbjct: 323 MAGLELGRSI-HAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL 379
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/588 (71%), Positives = 491/588 (83%), Gaps = 3/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRREC+ PNDFTFPC+FKAS++LH+PVTGKQLHALALK G I DVFVGCSAFDMYSKTGL
Sbjct: 100 MRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGL 159
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +A MFDEMP RNLATWNAY+SNAV GR +AI AF GEP+ ITFCAFLNA
Sbjct: 160 RPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNA 219
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--KNDV 178
C+D L+LGRQLHGF+VRS + +VSV NGL+DFYGKC ++ +++VF I +N V
Sbjct: 220 CADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVV 279
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SWCS+L VQN+EEE C +FL AR+E VEP DFMISSVLSACA + GLELGRSVHA+A
Sbjct: 280 SWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALA 338
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+KACVE NIFVGSALVD+YGKCGSI+ AE F +MPERNLV WNA+IGGYAH G DMAL
Sbjct: 339 LKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMAL 398
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S F+EMTS C +YVTLV VLSACSRAGAVE+G++IF SM +YGI+PGAEHYACVV
Sbjct: 399 SLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVV 458
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGR+GLVDRAYE IK MP+ PTISVWGALL AC+++GK +LG+IAA+ LF+LDP+DSG
Sbjct: 459 DLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSG 518
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
NHV+ SNM A+ GRWEEA +VRKEM+D+GIKK G SW++VKNR+H+FQAKD+ HE+N+E
Sbjct: 519 NHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSE 578
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQAML KLR EMK AGY+PD N +L+D+EEEEK +EV +HSEKIALAFGLI +P GVPIR
Sbjct: 579 IQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIR 638
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
ITKNLRIC DCHSA KFIS IVGRE+IVRDNNRFHRF DG+CSC DYW
Sbjct: 639 ITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 22/374 (5%)
Query: 27 VTGKQLHALALKSGQIHDV----FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAY 82
+ G+ +HA L++ HD F+ +MYSK L + A + R + TW +
Sbjct: 24 LLGRAVHAHILRT---HDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSL 80
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
IS V R +A+ F N+RR P+ TF A + + G+QLH ++ G
Sbjct: 81 ISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGN 140
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
+V V D Y K A+ +FD + +N +W + Y+ N ++ C +
Sbjct: 141 ILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNA----YMSNAVQDGRCLDAIA 196
Query: 203 ARREGV----EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
A ++ + EP + L+ACA I LELGR +H V++ ++ V + L+D YG
Sbjct: 197 AFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYG 256
Query: 259 KCGSIQDAEIAFNKM--PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
KCG I +E+ F+++ RN+V W +++ + A F + R E P
Sbjct: 257 KCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ---ARKEVEPTDF 313
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
+ VLSAC+ G +E G + +++ LK ++ + +VDL G+ G ++ A ++ +E
Sbjct: 314 MISSVLSACAELGGLELGRSV-HALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFRE 372
Query: 377 MPMRPTISVWGALL 390
MP R ++ W A++
Sbjct: 373 MPERNLVT-WNAMI 385
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 5/266 (1%)
Query: 129 LGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LGR +H ++R+ S +CN LV+ Y K + A++V + V+W S++
Sbjct: 25 LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V N + F RRE V P DF V A A + G+ +HA+A+K ++
Sbjct: 85 VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
FVG + DMY K G +A F++MP RNL WNA + G A+++F++ +
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E PN +T L+AC+ ++E G ++ + ++ + + ++D G+ G +
Sbjct: 205 DGE--PNAITFCAFLNACADIVSLELGRQL-HGFIVRSRYREDVSVFNGLIDFYGKCGDI 261
Query: 368 DRAYEIIKEM-PMRPTISVWGALLNA 392
+ + + R + W +LL A
Sbjct: 262 VSSELVFSRIGSGRRNVVSWCSLLAA 287
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/586 (69%), Positives = 482/586 (82%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + PNDFTFPC FKA ++L +PVTGKQ+HALA+K G+I DVFVGCSAFDMY KT L
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DDA K+FDE+PERNL TWNA+ISN+V GRP+ AI+AFI RR G P+ ITFCAFLNA
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD L LG QLHG ++RSGFD +VSVCNGL+DFYGKC ++ ++++F + KN VSW
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
CS++ YVQN+E+E ++L +R++ VE DFMISSVLSACA +AGLELGRS+HA AVK
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVE IFVGSALVDMYGKCG I+D+E AF++MPE+NLV N++IGGYAHQG DMAL+
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM C PNY+T V +LSACSRAGAVE GMKIF SM YGI+PGAEHY+C+VD+
Sbjct: 399 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 458
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V+RAYE IK+MP++PTISVWGAL NACR++GKP+LG +AA+NLFKLDP DSGNH
Sbjct: 459 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 518
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN FAA GRW EA+ VR+E+K VGIKKGAG SWI+VKN++H FQAKD SH N EIQ
Sbjct: 519 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQ 578
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L KLR EM+AAGY PD +LYD+EEEEK EV HHSEK+ALAFGL+++P VPIRIT
Sbjct: 579 TTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRIT 638
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCHS FKF+SG V RE+IVRDNNRFHRF DG CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 166/358 (46%), Gaps = 6/358 (1%)
Query: 29 GKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ +HA +K+ F+ +MYSK + A + P RN+ +W + IS
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G A+ F +RR G P+ TF CAF A + L G+Q+H V+ G +V
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAF-KAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V D Y K A+ +FD I ++N +W + + V + + F+ RR
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
P + L+AC+ L LG +H + +++ + ++ V + L+D YGKC I+ +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
EI F +M +N V W +++ Y Q H D S + +++ + VLSAC+
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYV-QNHEDEKASVLYLRSRKDIVETSDFM-ISSVLSACA 321
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+E G I ++ +K ++ + +VD+ G+ G ++ + + EMP + ++
Sbjct: 322 GMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/586 (69%), Positives = 482/586 (82%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + PNDFTFPC FKA ++L +PVTGKQ+HALA+K G+I DVFVGCSAFDMY KT L
Sbjct: 49 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DDA K+FDE+PERNL TWNA+ISN+V GRP+ AI+AFI RR G P+ ITFCAFLNA
Sbjct: 109 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 168
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD L LG QLHG ++RSGFD +VSVCNGL+DFYGKC ++ ++++F + KN VSW
Sbjct: 169 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 228
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
CS++ YVQN+E+E ++L +R++ VE DFMISSVLSACA +AGLELGRS+HA AVK
Sbjct: 229 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 288
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVE IFVGSALVDMYGKCG I+D+E AF++MPE+NLV N++IGGYAHQG DMAL+
Sbjct: 289 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 348
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM C PNY+T V +LSACSRAGAVE GMKIF SM YGI+PGAEHY+C+VD+
Sbjct: 349 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 408
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V+RAYE IK+MP++PTISVWGAL NACR++GKP+LG +AA+NLFKLDP DSGNH
Sbjct: 409 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 468
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN FAA GRW EA+ VR+E+K VGIKKGAG SWI+VKN++H FQAKD SH N EIQ
Sbjct: 469 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQ 528
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L KLR EM+AAGY PD +LYD+EEEEK EV HHSEK+ALAFGL+++P VPIRIT
Sbjct: 529 TTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRIT 588
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCHS FKF+SG V RE+IVRDNNRFHRF DG CSC DYW
Sbjct: 589 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 5/332 (1%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYSK + A + P RN+ +W + IS G A+ F +RR G P+ T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 114 F-CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
F CAF A + L G+Q+H V+ G +V V D Y K A+ +FD I
Sbjct: 61 FPCAF-KAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++N +W + + V + + F+ RR P + L+AC+ L LG
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H + +++ + ++ V + L+D YGKC I+ +EI F +M +N V W +++ Y Q
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV-QN 238
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
H D S + +++ + VLSAC+ +E G I ++ +K ++
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFM-ISSVLSACAGMAGLELGRSI-HAHAVKACVERTIF 296
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ +VD+ G+ G ++ + + EMP + ++
Sbjct: 297 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 328
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/587 (70%), Positives = 484/587 (82%), Gaps = 2/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ + PNDFTFPC+FKAS+ + IP+TGKQ+H LALK G I+DVFVGCS FDMY KTG
Sbjct: 99 MRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGF 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ DA MFDEMP+RNLATWNAYISNAV R +AI AF GEP+ ITFCAFLNA
Sbjct: 159 RGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-KNDVS 179
C D L LGRQLH F+VR G+ +VSV NGL+DFYGKC ++ A++VF+ I + KN VS
Sbjct: 219 CVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVS 278
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
WCSML VQN+EEE C +FL AR+E VEP DFMISSVLSACA + GLELGRSVHA+AV
Sbjct: 279 WCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAV 337
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KACVE NIFVGSALVDMYGKCGSI++AE F+++PERNLV WNA+IGGYAHQG DMAL
Sbjct: 338 KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALR 397
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FEEMT P+YVTL+ +LS CSR GAVE+G++IF SM L YGI+PGAEH+ACVVD
Sbjct: 398 LFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVD 457
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+GLVDRAYE I+ M ++PTISVWGALL ACR++GK ELG+IAA+ LF+LD DSGN
Sbjct: 458 LLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGN 517
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HV+LSNM A+ GRWEEA +VRKEMKD+GIKK G SWI+VKNRIH+FQAKD+SH+RN+EI
Sbjct: 518 HVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEI 577
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
QAML KLR MK AGY+PDTN +L+D+E+EEK +EV +HSEKIALAFGLIA+P GVPIRI
Sbjct: 578 QAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRI 637
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
TKNLRICGDCHSA KFIS IVGRE+IVRDN+RFHRF DG CSC DYW
Sbjct: 638 TKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 180/387 (46%), Gaps = 8/387 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
I P + L +++ + H + G+ +HA +++ F+ +MYSK L + A
Sbjct: 3 IHPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSA 61
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ R + TW + IS V R A+ F N+RR +P+ TF A +
Sbjct: 62 QHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFV 121
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ G+Q+HG ++ G +V V D Y K G A +FD + +N +W + +
Sbjct: 122 QIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI 181
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
VQ+ + F EP + L+AC + L LGR +HA V+ +
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYK 241
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEE 303
++ V + L+D YGKCG I AE+ FN++ R N+V W +++ + A F +
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ 301
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
R E P + VLSAC+ G +E G + +++ +K ++ + +VD+ G+
Sbjct: 302 ---ARKEVEPTDFMISSVLSACAELGGLELGRSV-HALAVKACVEDNIFVGSALVDMYGK 357
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALL 390
G ++ A ++ E+P R ++ W A++
Sbjct: 358 CGSIENAEQVFSELPERNLVT-WNAMI 383
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ CS+L GR +H ++R+ S + N LV+ Y K + + A+ V + V+W
Sbjct: 19 THCSIL--GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTW 76
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ V N F RR+ V+P DF V A A + G+ +H +A+K
Sbjct: 77 TSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALK 136
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++FVG + DMY K G DA F++MP+RNL WNA I + A+ +
Sbjct: 137 GGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVA 196
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+E + E PN +T L+AC + G ++ ++ ++ G K ++D
Sbjct: 197 FKEFLCVHGE--PNSITFCAFLNACVDMVRLNLGRQL-HAFIVRCGYKEDVSVANGLIDF 253
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G+ G + A + + R + W ++L A
Sbjct: 254 YGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA 285
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/569 (64%), Positives = 442/569 (77%), Gaps = 33/569 (5%)
Query: 18 KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLA 77
+A ++L +PVTGKQ+HALA+K G+I DVFVGCSAFDMY KT L+DDA K+FDE+PERNL
Sbjct: 52 EAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE 111
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
TWNA+ISN+V GRP+ AI+AFI RR G P+ ITFCAFLNACSD L LG QLHG +
Sbjct: 112 TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 171
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
+RSGFD +VS+ + ++++F + KN VSWCS++ YVQN+E+E
Sbjct: 172 LRSGFDTDVSIRS--------------SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 217
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
++L +R++ VE DFMISSVLSACA +AGLELGRS+HA AVKACVE IFVGSALVDMY
Sbjct: 218 VLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 277
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
GKCG I+D+E AF++MPE+NLV N++IGGYAHQG DMAL+ FEEM C
Sbjct: 278 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC-------- 329
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
GAVE GMKIF SM YGI+PGAEHY+C+VD+LGRAG+V+RAYE IK+M
Sbjct: 330 -----------GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 378
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P++PTISVWGAL NACR++GKP+LG +AA+NLFKLDP DSGNHVLLSN FAA GRW EA+
Sbjct: 379 PIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEAN 438
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
VR+E+K VGIKKGAG SWI+VKN++H FQAKD SH N EIQ L KLR EM+AAGY P
Sbjct: 439 TVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKP 498
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
D +LYD+EEEEK EV HHSEK+ALAFGL+++P VPIRITKNLRICGDCHS FKF+S
Sbjct: 499 DLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVS 558
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G V RE+IVRDNNRFHRF DG CSC DYW
Sbjct: 559 GSVKREIIVRDNNRFHRFKDGICSCKDYW 587
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 31/331 (9%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYSK + A + P RN+ +W + IS G A+ F +RR
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR--------- 51
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
A + L G+Q+H V+ G +V V D Y K A+ +FD I
Sbjct: 52 -----EAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 106
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++N +W + + V + + F+ RR P + L+AC+ L LG
Sbjct: 107 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 166
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H + +++ + ++ SI+ +EI F +M +N V W +++ Y Q H
Sbjct: 167 LHGLVLRSGFDTDV--------------SIRSSEIIFTEMGTKNAVSWCSLVAAYV-QNH 211
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D S + +++ + VLSAC+ +E G I ++ +K ++
Sbjct: 212 EDEKASVLYLRSRKDIVETSDFM-ISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFV 269
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ +VD+ G+ G ++ + + EMP + ++
Sbjct: 270 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 300
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R++ + +DF + A + + G+ +HA A+K+ +FVG + DMY K G
Sbjct: 224 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 283
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF 99
+D+++ FDEMPE+NL T N+ I G+ A+ F
Sbjct: 284 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 321
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY K + A + P RN+V W ++I G A GH AL F E MR EAV +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE---MRREAVASL 57
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
V + A + + +F + D+ + L D A ++
Sbjct: 58 RLPVTGKQIHALAVKCGRILDVFVGCS--------------AFDMYCKTRLRDDARKLFD 103
Query: 376 EMPMRPTISVWGALLNACRVYGKP 399
E+P R + W A ++ G+P
Sbjct: 104 EIPER-NLETWNAFISNSVTDGRP 126
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/588 (60%), Positives = 442/588 (75%), Gaps = 3/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKAS-SALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKT 58
M R + PNDFTFP FKA+ SA G Q+H+LA++ G + D FV C+A DMY KT
Sbjct: 108 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 167
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A +F EMP RN+ WNA ++NAVL GRP I+A+ LR GG P++++ CAF
Sbjct: 168 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 227
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NAC+ L LG Q HGF+V+ GF+ +VSV N +VDFYGKC G A+ VFDG+ +N V
Sbjct: 228 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 287
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SWCSM+ Y QN EE +L ARR G EP DFM+SS L+ CA + GL LGR++HAVA
Sbjct: 288 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 347
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V++C++ NIFV SALVDMYGKCG ++DAE F + P+RNLV WNA+IGGYAH G A AL
Sbjct: 348 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 407
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F++M E PNY+TLV V+++CSR G + G ++F +M ++GI+P EHYACVV
Sbjct: 408 LVFDDMIR-SGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 466
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG+ ++AYE+I+ MPMRP+ISVWGALL AC+++GK ELGRIAA+ LF+LDP DSG
Sbjct: 467 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 526
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
NHVLLSNMFA+ GRW EA +RKEMK+VGIKK GCSW++ KN +H+F+AKDT HE E
Sbjct: 527 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 586
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQA+L+KLR++M+AAGY+PDT ++LYD+EEEEK +EV HSEK+ALAFGLI IPPGVPIR
Sbjct: 587 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 646
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLRIC DCH AFKFISGIVGRE+IVRDNNRFH F CSC DYW
Sbjct: 647 IMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 12/421 (2%)
Query: 17 FKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
F+++ A P G+ HA AL+ F+ ++YSK L A P
Sbjct: 22 FESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPT 81
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSDCSLLQLGRQLH 134
+ ++ A+IS A GRP A+ AF + R G P+ TF AF A S +G Q+H
Sbjct: 82 VVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIH 141
Query: 135 GFLVRSGF---DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+R G+ D VS C L D Y K + LA+ +F + ++N V+W +++ V +
Sbjct: 142 SLAIRFGYLPVDPFVS-CAAL-DMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG 199
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ + R G P + +ACA L LG H VK E ++ V +
Sbjct: 200 RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN 259
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
++VD YGKC A F+ M RN V W +++ YA G + A +++ + + R
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY--LGARRSGE 317
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P + L+ C+ + G + +++ ++ I + +VD+ G+ G V+ A
Sbjct: 318 EPTDFMVSSALTTCAGLLGLHLG-RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+I E P R ++ W A++ G + + D++ + + N++ L N+ +
Sbjct: 377 QIFYETPQRNLVT-WNAMIGGYAHIGDAQNALLVFDDMIR-SGETAPNYITLVNVITSCS 434
Query: 432 R 432
R
Sbjct: 435 R 435
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/588 (61%), Positives = 448/588 (76%), Gaps = 3/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQI-HDVFVGCSAFDMYSKT 58
M R + PNDFTFP FKA+++ G QLHALAL+ G + D FV C+A DMY KT
Sbjct: 110 MLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKT 169
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A ++FDEMP RN+ WNA ++NAVL GRP ++A+ LR GG P++++ CAF
Sbjct: 170 GCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFF 229
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NAC+ + L LG Q +GF+ + GF +VSV N +VDFYGKC VG A+ VFDG+ +N+V
Sbjct: 230 NACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNV 289
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SWCSM+V Y QN EE ++L ARR G EP DFM+SSVL+ CA + GL+LGR++HAVA
Sbjct: 290 SWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVA 349
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V++C++ NIFV SALVDMYGKCG I+DAE F +MP+RNLV WNA+IGGYAH G A AL
Sbjct: 350 VRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNAL 409
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S F++M M E PNY+TLV VL+ACSR G ++G ++F +M ++GI+P EHYACVV
Sbjct: 410 SVFDKMI-MGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVV 468
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLL RAG+ +RAY+II+ MPMRP+ISVWGALL C+++GK ELGRIAA+ LF+LDP DSG
Sbjct: 469 DLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSG 528
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
NHVLLSNM A+ GRW EA VRKEMK+VGIKK G SWI+ KN +H+FQAKDT+H+ N E
Sbjct: 529 NHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNRE 588
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQA+L KL+ +M+AAGY+PDT +ALYD+EEEEK +EV HSEK+ALAFGLI IPPG+PIR
Sbjct: 589 IQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIR 648
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLRIC DCH AFKFISGI GRE+IVRDNN FH F + CSC DYW
Sbjct: 649 IMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 19/398 (4%)
Query: 29 GKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ HA AL+ F+ ++YSK L A P + ++ A+IS A
Sbjct: 36 GRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAA 95
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSDCSLLQLGRQLHGFLVRSGF--DG 144
RP A+ AF + R G P+ TF AF A S G QLH +R G+ D
Sbjct: 96 QHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDD 155
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
C L D Y K + LA+ +FD + ++N V+W +++ V + + + R
Sbjct: 156 AFVSCAAL-DMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLR 214
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P + + +ACA + L LG + K ++ V +++VD YGKC +
Sbjct: 215 GAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVG 274
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F+ M RN V W +++ YA G + A F + + R P + VL+
Sbjct: 275 KARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAF--FVYLGARRAGEEPTDFMVSSVLTT 332
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ ++ G + +++ ++ I + +VD+ G+ G ++ A ++ EMP R ++
Sbjct: 333 CAGLLGLDLG-RALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVT 391
Query: 385 VWGALL----------NACRVYGKPELGRIAADNLFKL 412
W A++ NA V+ K +G+ A N L
Sbjct: 392 -WNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITL 428
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/589 (60%), Positives = 442/589 (75%), Gaps = 4/589 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSAL--HIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK 57
M R + PNDFTFP FKA++ G Q+HALAL+ G + D FV C+A DMY K
Sbjct: 102 MLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFK 161
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
TG A ++F+EMP RN+ WNA ++NAV+ GRP A+ LR GG P++++ CAF
Sbjct: 162 TGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAF 221
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
NAC+ L LG Q HGF+V GFD +VSV N +VDFYGKC G A+ VFDG+ +N
Sbjct: 222 FNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNS 281
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSWCSM+V Y Q+ EE+ +++ AR G EP DFM+SSVL+ CA + GL GR++HAV
Sbjct: 282 VSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAV 341
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
AV++C++ NIFV SALVDMYGKCG ++DAE F MPERNLV WNA+IGGYAH G A A
Sbjct: 342 AVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNA 401
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F+ M + PN++TLV V++ACSR G + G ++F +M ++G++P EHYACV
Sbjct: 402 LAVFDAMIRSGGTS-PNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACV 460
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG+ +RAYEII+ MPMRP+ISVWGALL AC+++GK ELGRIA++ LF+LDP DS
Sbjct: 461 VDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDS 520
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GNHVLLSNM A+ GRW EA VRKEMK+VGIKK GCSWI+ KN +H+F AKDT H+RN+
Sbjct: 521 GNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNS 580
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EIQA+L KL+++M+A+GY+PDT ++LYDVEEEEK TEV HSEK+ALAFGLI IPP VPI
Sbjct: 581 EIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPI 640
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RITKNLRIC DCH AFKF+SGIVGRE+IVRDNNRFH F CSC DYW
Sbjct: 641 RITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 9/420 (2%)
Query: 17 FKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
F+A+ + P G+ HA AL+ F+ ++YSK L A P
Sbjct: 16 FEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPT 75
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN--ACSDCSLLQLGRQL 133
+ ++ A+IS A RP A+ AF + R G P+ TF + AC+ +G Q+
Sbjct: 76 VVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQI 135
Query: 134 HGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
H +R G+ G+ V +D Y K +GLA+ +F+ + ++N ++W +++ V +
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ + R G P + + +ACA L LG H V + ++ V +A
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
+VD YGKC A F+ M RN V W ++I YA G + AL+ + M +
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVY--MGARNTGEE 313
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P + VL+ C+ + G + +++ ++ I + +VD+ G+ G V+ A +
Sbjct: 314 PTDFMVSSVLTTCAGLLGLNFG-RALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQ 372
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+ +MP R ++ W A++ G + D + + S NH+ L N+ A R
Sbjct: 373 VFLDMPERNLVT-WNAMIGGYAHIGDAQNALAVFDAMIR-SGGTSPNHITLVNVITACSR 430
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/588 (60%), Positives = 442/588 (75%), Gaps = 3/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKAS-SALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKT 58
M R + PNDFTFP FKA+ SA G Q+H+LA++ G + D FV C+A DMY KT
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A +F EMP RN+ WNA ++NAVL GRP I+A+ LR GG P++++ CAF
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NAC+ L LG Q HGF+V+ GF+ +VSV N +VDFYGKC G A+ VFDG+ +N V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SWCSM+ Y QN EE +L ARR G EP DFM+SS L+ CA + GL LGR++HAVA
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V++C++ NIFV SALVDMYGKCG ++DAE F + P+RNLV WNA+IGGYAH G A AL
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F++M E PNY+TLV V+++CSR G + G ++F +M ++GI+P EHYACVV
Sbjct: 301 LVFDDMIR-SGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 359
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG+ ++AYE+I+ MPMRP+ISVWGALL AC+++GK ELGRIAA+ LF+LDP DSG
Sbjct: 360 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 419
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
NHVLLSNMFA+ GRW EA +RKEMK+VGIKK GCSW++ KN +H+F+AKDT HE E
Sbjct: 420 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 479
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQA+L+KLR++M+AAGY+PDT ++LYD+EEEEK +EV HSEK+ALAFGLI IPPGVPIR
Sbjct: 480 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 539
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLRIC DCH AFKFISGIVGRE+IVRDNNRFH F CSC DYW
Sbjct: 540 IMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/507 (66%), Positives = 411/507 (81%), Gaps = 2/507 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +C+ PNDFTFPC+ KAS+ L + TGKQLHALA+K G I+DVFVGCS FDMYSK G
Sbjct: 99 MLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGF 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+FDEMP RNL TWNAYISN+VL GRP++++ AFI L R GG+PD ITFCAFLNA
Sbjct: 159 LNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD L G QLHGF++RSG+ NVSV NGL+DFYGKC EV +++VFD + ++N VSW
Sbjct: 219 CSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YVQN EEE +FL AR+E +EP DFM+SSVL ACA ++ +E GRSV A+AVK
Sbjct: 279 SSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVE NIFV SALVDMYGKCGSI +AE AFN MPERNLV WNA++GGYAHQGHA+ A++
Sbjct: 339 ACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVAL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
EEMTS VP+YV+L+C LSACSRAG ++ GMKIF SM +YG++PG EHYAC+VDL
Sbjct: 399 LEEMTSA-AGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDL 457
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V+ AY+ IK MP PTIS+WGALL ACR++GKPELG++AA+ LF+LDP DSGNH
Sbjct: 458 LGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNH 517
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSNMFAATGRWEE +VR EMK+VGIKKGAG SWI+V +RIH+FQAKD SHE++ EIQ
Sbjct: 518 VVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQ 577
Query: 481 AMLTKLREEMK-AAGYIPDTNFALYDV 506
+L KLR+EM+ AAG I D N+AL++V
Sbjct: 578 DILGKLRKEMQDAAGCIADPNYALFEV 604
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 5/365 (1%)
Query: 27 VTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
+ G+ HA LK+ + F+ +MY+K + A + + P R++ TW A I+
Sbjct: 23 LLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAG 82
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+V G +A+ F ++ P+ TF L A + + G+QLH V+ G +
Sbjct: 83 SVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIND 142
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V + D Y K + A VFD + +N +W + + V + E+ F+ R
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLR 202
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P + L+AC+ GL G +H +++ N+ V + L+D YGKCG ++
Sbjct: 203 VGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVEC 262
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+E+ F++M ERN V W+++I Y + A F + + + + P + VL AC
Sbjct: 263 SEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLF--LRARKEDIEPTDFMVSSVLCAC 320
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +E G + ++ +K ++ + +VD+ G+ G +D A + MP R +S
Sbjct: 321 AGLSEIEFGRSV-QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVS- 378
Query: 386 WGALL 390
W ALL
Sbjct: 379 WNALL 383
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/583 (60%), Positives = 434/583 (74%), Gaps = 5/583 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDA 64
+SPN + L +++ + G+ HA +K+ F+ +MYSK + A
Sbjct: 4 LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSD 123
+ P R++ TW A I+ +V GR +A+ F N+RR +P+ TF CAF + S
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S L +G+Q+H V++G +V V D Y K A+ +FD + ++N +W +
Sbjct: 122 RSPL-VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L V ++ F+ AR+EG+EP DFM+SSVLSACA ++ LE+G+SVH +AVKACV
Sbjct: 181 LSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACV 240
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
GNIFVGSALVDMYGKCGSI+DAE AF++MPERNLV WNA+IGGYAHQG ADMA++ F+E
Sbjct: 241 VGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDE 300
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
MT PNYVT VCVLSACSRAG+V GM+IF SM +YGI+PGAEHYACVVDLLGR
Sbjct: 301 MTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGR 360
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG+V++AY+ IK+MP+RPT+SVWGALL A +++GK ELG++AADNLF+LDP DSGNHVLL
Sbjct: 361 AGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLL 420
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SNMFAA GRWEEA LVRKEMKDVGIKKGAGCSWI+ N +H+FQAKDTSHERN+EIQAML
Sbjct: 421 SNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAML 480
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
KLR EM+AAGYIPDT+FAL+D+EEEEK EV +HSEKIALAFGLI+IP GVPIRITKNL
Sbjct: 481 AKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNL 540
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RICGDCHSA KFISGIVGRE+IVRDNN FHRF D CSC DYW
Sbjct: 541 RICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 207/358 (57%), Gaps = 14/358 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ I PNDFTFPC FKAS +L P+ GKQ+HALA+K+GQI DVFVGCSAFDMYSK GL
Sbjct: 99 MRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGL 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A KMFDEMPERN+ATWNAY+SN+VL GR +A+ AFI R+ G EP + L+A
Sbjct: 159 TEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ S+L++G+ +H V++ GN+ V + LVD YGKC + A+ FD + ++N V+W
Sbjct: 219 CAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTW 278
Query: 181 CSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
+M+ Y + + +F +T V P VLSAC+R + +G + ++
Sbjct: 279 NAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESM 338
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV-CWNAIIGGYAHQGHADM 296
+ +E + +VD+ G+ G ++ A KMP R V W A++G G +++
Sbjct: 339 RGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSEL 398
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMKIFYSMTLKYGIKPGA 351
+ + + + N+V L + +A R A V K MK GIK GA
Sbjct: 399 GKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMK-------DVGIKKGA 449
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/507 (66%), Positives = 410/507 (80%), Gaps = 2/507 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +C+ PNDFTFPC+ KAS+ L + TGKQLHALA+K G I+DVFVGCS FDMYSK G
Sbjct: 99 MLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGF 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+FDEMP RNL TWNAYISN+VL GRP++++ AFI L R GG+PD ITFC FLNA
Sbjct: 159 LNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD L G QLHGF++RSG+ NVSV NGL+DFYGKC EV +++VFD + ++N VSW
Sbjct: 219 CSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YVQN EEE +FL AR+E +EP DFM+SSVL ACA ++ +E GRSV A+AVK
Sbjct: 279 SSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
ACVE NIFV SALVDMYGKCGSI +AE AFN MPERNLV WNA++GGYAHQGHA+ A++
Sbjct: 339 ACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVAL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
EEMTS VP+YV+L+C LSACSRAG ++ GMKIF SM +YG++PG EHYAC+VDL
Sbjct: 399 LEEMTSA-AGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDL 457
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG+V+ AY+ IK MP PTIS+WGALL ACR++GKPELG++AA+ LF+LDP DSGNH
Sbjct: 458 LGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNH 517
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSNMFAATGRWEE +VR EMK+VGIKKGAG SWI+V +RIH+FQAKD SHE++ EIQ
Sbjct: 518 VVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEIQ 577
Query: 481 AMLTKLREEMK-AAGYIPDTNFALYDV 506
+L KLR+EM+ AAG I D N+AL++V
Sbjct: 578 DILGKLRKEMQDAAGCIADPNYALFEV 604
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 5/365 (1%)
Query: 27 VTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
+ G+ HA LK+ + F+ +MY+K + A + + P R++ TW A I+
Sbjct: 23 LLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAG 82
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+V G +A+ F ++ P+ TF L A + + G+QLH V+ G +
Sbjct: 83 SVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIND 142
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V + D Y K + A VFD + +N +W + + V + E+ F+ R
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLR 202
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P L+AC+ GL G +H +++ N+ V + L+D YGKCG ++
Sbjct: 203 VGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVEC 262
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+E+ F++M ERN V W+++I Y + A F + + + + P + VL AC
Sbjct: 263 SEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLF--LRARKEDIEPTDFMVSSVLCAC 320
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +E G + ++ +K ++ + +VD+ G+ G +D A + MP R +S
Sbjct: 321 AGLSEIEFGRSV-QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVS- 378
Query: 386 WGALL 390
W ALL
Sbjct: 379 WNALL 383
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/559 (59%), Positives = 419/559 (74%), Gaps = 3/559 (0%)
Query: 1 MRRECISPNDFTFPCLFKAS-SALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKT 58
M R + PNDFTFP FKA+ SA G Q+H+LA++ G + D FV C+A DMY KT
Sbjct: 108 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 167
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A +F EMP RN+ WNA ++NAVL GRP I+A+ LR GG P++++ CAF
Sbjct: 168 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 227
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NAC+ L LG Q HGF+V+ GF+ +VSV N +VDFYGKC G A+ VFDG+ +N V
Sbjct: 228 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 287
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SWCSM+ Y QN EE +L ARR G EP DFM+SS L+ CA + GL LGR++HAVA
Sbjct: 288 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 347
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V++C++ NIFV SALVDMYGKCG ++DAE F + P+RNLV WNA+IGGYAH G A AL
Sbjct: 348 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 407
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F++M E PNY+TLV V+++CSR G + G ++F +M ++GI+P EHYACVV
Sbjct: 408 LVFDDMIR-SGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVV 466
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG+ ++AYE+I+ MPMRP+ISVWGALL AC+++GK ELGRIAA+ LF+LDP DSG
Sbjct: 467 DLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG 526
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
NHVLLSNMFA+ GRW EA +RKEMK+VGIKK GCSW++ KN +H+F+AKDT HE E
Sbjct: 527 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 586
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQA+L+KLR++M+AAGY+PDT ++LYD+EEEEK +EV HSEK+ALAFGLI IPPGVPIR
Sbjct: 587 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 646
Query: 539 ITKNLRICGDCHSAFKFIS 557
I KNLRIC DCH AFKFIS
Sbjct: 647 IMKNLRICVDCHRAFKFIS 665
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 12/421 (2%)
Query: 17 FKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
F+++ A P G+ HA AL+ F+ ++YSK L A P
Sbjct: 22 FESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPT 81
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSDCSLLQLGRQLH 134
+ ++ A+IS A GRP A+ AF + R G P+ TF AF A S +G Q+H
Sbjct: 82 VVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIH 141
Query: 135 GFLVRSGF---DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+R G+ D VS C L D Y K + LA+ +F + ++N V+W +++ V +
Sbjct: 142 SLAIRFGYLPVDPFVS-CAAL-DMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG 199
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ + R G P + +ACA L LG H VK E ++ V +
Sbjct: 200 RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN 259
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
++VD YGKC A F+ M RN V W +++ YA G + A +++ + + R
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY--LGARRSGE 317
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P + L+ C+ + G + +++ ++ I + +VD+ G+ G V+ A
Sbjct: 318 EPTDFMVSSALTTCAGLLGLHLG-RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+I E P R ++ W A++ G + + D++ + + N++ L N+ +
Sbjct: 377 QIFYETPQRNLVT-WNAMIGGYAHIGDAQNALLVFDDMIR-SGETAPNYITLVNVITSCS 434
Query: 432 R 432
R
Sbjct: 435 R 435
>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
Length = 648
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 297/510 (58%), Positives = 383/510 (75%), Gaps = 5/510 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALH---IPVTGKQLHALALKSGQI-HDVFVGCSAFDMYS 56
M R + PNDFTFP FKA+++ G Q+HALAL+ G + D FV C+A DMY
Sbjct: 106 MLRLGLRPNDFTFPSAFKAAASAPPRCAAAVGPQVHALALRFGYLPDDAFVSCAALDMYF 165
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
KTG A ++FDEMP RN+ WNA ++NAVL GRP ++A+ LR GG P++++ CA
Sbjct: 166 KTGRLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVCA 225
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
F NAC+ + L LG Q HGF+ + GFD +VSV N +VDFYGKC +G A++VFDG+ +N
Sbjct: 226 FFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRN 285
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSWCSM+V Y QN EE ++L ARR G EP DFM+SS+L+ CA + GL+LGR++HA
Sbjct: 286 SVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRALHA 345
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
VA ++C++ NIFV SALVDMYGKCG IQDAE F +MP+RNLV WNA+IGGYAH G A
Sbjct: 346 VAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAWN 405
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL+ F+EM R E PNY+T+V VL+ACSR G ++G ++F +M ++GI+P EHYAC
Sbjct: 406 ALAVFDEMIMGR-ETAPNYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEPRIEHYAC 464
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVDLLGRAG+ ++AYEII+ MPMRP+ISVWGALL C+++GK ELGR+AA+ LF+LDP D
Sbjct: 465 VVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHGKTELGRVAAEKLFELDPQD 524
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
SGNHVLLSNM A+ GRW EA VRKEMK+VGIKK G SWI+ KN +H+FQAKDT+HE N
Sbjct: 525 SGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNIVHVFQAKDTTHEMN 584
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+EIQA+L KL+ +M+ AGY+PDT +ALYD+
Sbjct: 585 SEIQALLAKLKGQMQGAGYMPDTQYALYDL 614
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 181/411 (44%), Gaps = 21/411 (5%)
Query: 18 KASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
+A+ A P G+ HA AL+ F+ ++YSK L A P +
Sbjct: 21 EAAIASRSPRLGRAAHARALRLLAPALPPFICAHLVNLYSKLDLPGAAAAALAADPSPTV 80
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS---LLQLGRQL 133
++ A+IS A RP A+ AF + R G P+ TF + A + +G Q+
Sbjct: 81 VSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRCAAAVGPQV 140
Query: 134 HGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
H +R G+ D C L D Y K + LA+ +FD + ++N V+W +++ V +
Sbjct: 141 HALALRFGYLPDDAFVSCAAL-DMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNAVLDG 199
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ + R G P + + +ACA + L LG H K + ++ V +
Sbjct: 200 RPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSN 259
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
++VD YGKC + A + F+ M RN V W +++ YA G + A + + + R
Sbjct: 260 SMVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVY--LGARRAGE 317
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P + +L+ C+ ++ G + +++ + I + +VD+ G+ G + A
Sbjct: 318 EPTDFMVSSLLTTCAGLLGLDLG-RALHAVAARSCIDANIFVASALVDMYGKCGGIQDAE 376
Query: 372 EIIKEMPMRPTISVWGALL----------NACRVYGKPELGRIAADNLFKL 412
++ EMP R ++ W A++ NA V+ + +GR A N +
Sbjct: 377 QVFFEMPQRNLVT-WNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITI 426
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/586 (43%), Positives = 365/586 (62%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN T + + L GKQ+H A++SG DV V +MY+K G
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A K+F+ MP R++A+WNA I L + A+ F ++ G +P+ IT + L A
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPA 331
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+HG+ +RSGF+ N V N LV+ Y KC V A +F+ + KN V+W
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAW 391
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y Q+ +F+ + +G++P F I SVL ACA LE G+ +H ++
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR 451
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ E N+ VG+ LVD+Y KCG++ A+ F +MPE+++V W +I Y GH + AL+
Sbjct: 452 SGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALAL 511
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + +++ +L+ACS AG V++G++ F M YG+ P EHYAC+VDL
Sbjct: 512 FSKMQETGTKL--DHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A IIK M + P +VWGALL ACR++ ELG AA +LF+LDP+++G +
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYY 629
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A RWE+ +RK MK+ G+KK GCS ++V + F D +H ++ +I
Sbjct: 630 VLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIY 689
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L E+M+ AGY+P+TN AL DVEEE K + HSEK+A++FG+I PG+PIRI
Sbjct: 690 AMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIM 749
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS IVGRE+IVRD NRFH +G+CSC DYW
Sbjct: 750 KNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 220/400 (55%), Gaps = 4/400 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I+P+ F + KA + G+++H + G DV VG + MY+K G
Sbjct: 111 MQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGS 170
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++FD MP+R++ +WNA I+ G+P A+ F ++ G +P+ T + +
Sbjct: 171 LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H + +RSG + +V V NGLV+ Y KC V A +F+ + ++ SW
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y N + F + G++P + SVL ACA + LE G+ +H A++
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIR 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ E N VG+ALV+MY KCG++ A F +MP++N+V WNAII GY+ GH AL+
Sbjct: 351 SGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALAL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + + P+ +V VL AC+ A+E+G +I + T++ G + +VD+
Sbjct: 411 FIEMQAQGIK--PDSFAIVSVLPACAHFLALEQGKQI-HGYTIRSGFESNVVVGTGLVDI 467
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G V+ A ++ + MP + +S W ++ A ++G E
Sbjct: 468 YAKCGNVNTAQKLFERMPEQDVVS-WTTMILAYGIHGHGE 506
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 172/330 (52%), Gaps = 12/330 (3%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
N W I V G A+ + ++RTG PD + F + + AC S LQ GR++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
++ GF+ +V V L Y KC + A+ VFD + ++ VSW +++ Y QN +
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F + G++P + SV+ CA + LE G+ +H A+++ +E ++ V + LV
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
+MY KCG++ A F +MP R++ WNAIIGGY+ AL+ F M + PN
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK--PN 321
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRA 370
+T+V VL AC+ A+E+G +I Y I+ G E V V++ + G V+ A
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIH-----GYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPE 400
Y++ + MP + ++ W A+++ +G P
Sbjct: 377 YKLFERMPKKNVVA-WNAIISGYSQHGHPH 405
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
I N V W ++ YV+N +++ +R G+ P + SV+ AC + L+ GR
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH + E ++ VG+AL MY KCGS+++A F++MP+R++V WNAII GY+ G
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL+ F EM + PN TLV V+ C+ A+E+G +I + ++ GI+
Sbjct: 201 QPYEALALFSEMQVNGIK--PNSSTLVSVMPVCAHLLALEQGKQI-HCYAIRSGIESDVL 257
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+V++ + G V+ A+++ + MP+R S W A++
Sbjct: 258 VVNGLVNMYAKCGNVNTAHKLFERMPIRDVAS-WNAII 294
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/586 (43%), Positives = 361/586 (61%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I PN FT KA + + + G+QLH+ +K D+FV DMYSK L
Sbjct: 350 MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL 409
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA F+ +PE++L WNA IS A+ F+ + + G + T L +
Sbjct: 410 LEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 469
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ ++ + RQ+HG V+SGF ++ V N L+D YGKC+ V A+ +F+ + VS+
Sbjct: 470 TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSF 529
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y Q + E ++FL + ++P F+ SS+L+ACA ++ E G+ +H +K
Sbjct: 530 TSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK 589
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+IF G++LV+MY KCGSI DA AF+++ ER +V W+A+IGG A GH AL
Sbjct: 590 YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQL 649
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M ++ PN++TLV VL AC+ AG V + F SM +G KP EHYAC++DL
Sbjct: 650 FNQM--LKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDL 707
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A E++ +MP SVWGALL A R++ ELGR AA+ LF L+P SG H
Sbjct: 708 LGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTH 767
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+ G+WE VR+ M+D +KK G SWI VK++++ F D SH R+ EI
Sbjct: 768 VLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIY 827
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L + M AGY+P L+DVE+ EK + HHSEK+A+AFGLIA P G PIR+
Sbjct: 828 AKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVK 887
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+AFK+I IV RE+IVRD NRFH F DG CSC DYW
Sbjct: 888 KNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 230/446 (51%), Gaps = 13/446 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN+F+ + A + L GK +H +K G D F + DMY+K G DA
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+++ + ++ +WNA I+ VL + A++ ++R+G P++ T + L AC+
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMG 373
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +LGRQLH L++ + ++ V GLVD Y KC+ + A++ F+ + +K+ ++W +++
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q +E+ +F+ +EG+ +S++L + A + + + R VH ++VK+
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 493
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+I+V ++L+D YGKC ++DAE F + +LV + ++I YA G + AL F EM
Sbjct: 494 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 553
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M E P+ +L+AC+ A E+G K + LKYG +V++ + G
Sbjct: 554 DM--ELKPDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCG 610
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLL 423
+D A E+ R +S W A++ +G GR A LF L S NH+ L
Sbjct: 611 SIDDAGRAFSELTERGIVS-WSAMIGGLAQHGH---GRQAL-QLFNQMLKEGVSPNHITL 665
Query: 424 SNMFAA---TGRWEEADLVRKEMKDV 446
++ A G EA L + M+++
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEEL 691
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 231/479 (48%), Gaps = 46/479 (9%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N+FTF + KA S + GKQ+H + + SG DVFV + MY+K D+ ++F
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
DE+PERN+ +WNA S V A+ F + +G +P+ + + +NAC+
Sbjct: 216 DEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+ +HG+L++ G+D + N LVD Y K ++ A VF+ I + VSW +++ V
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ E ++ +R G+ P F +SS L ACA + ELGR +H+ +K +E ++F
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V LVDMY KC ++DA +AFN +PE++L+ WNAII GY+ ALS F EM
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-- 453
Query: 309 CEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E + N TL +L + + V ++ + +++K G ++D G+ V
Sbjct: 454 -EGIGFNQTTLSTILKSTAGLQVVHVCRQV-HGLSVKSGFHSDIYVVNSLIDSYGKCSHV 511
Query: 368 DRAYEIIKE----------------------------------MPMRPTISVWGALLNAC 393
+ A I +E M ++P V +LLNAC
Sbjct: 512 EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571
Query: 394 RVYGKPELGRIAADNLFK----LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
E G+ ++ K LD +GN L NM+A G ++A E+ + GI
Sbjct: 572 ANLSAFEQGKQLHVHILKYGFVLDIF-AGNS--LVNMYAKCGSIDDAGRAFSELTERGI 627
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 191/390 (48%), Gaps = 4/390 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P ++ L G Q+HA KSG D + ++YSK A K
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ DE E +L +W+A IS G A+ AF + G + + TF + L ACS
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L++G+Q+HG +V SGF+G+V V N LV Y KC+E +K +FD I ++N VSW ++
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YVQ +F G++P +F +SS+++AC + G+ +H +K + +
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
F +ALVDMY K G + DA F K+ + ++V WNA+I G H + AL +M
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK- 351
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R PN TL L AC+ G E G ++ +S +K ++ +VD+ + L
Sbjct: 352 -RSGICPNIFTLSSALKACAGMGLKELGRQL-HSSLMKMDMESDLFVSVGLVDMYSKCDL 409
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVY 396
++ A +P + I+ W A+++ Y
Sbjct: 410 LEDARMAFNLLPEKDLIA-WNAIISGYSQY 438
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 98 AFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
A +NL G P +++ L+ C L+ G Q+H + +SG + S+ N L++ Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC G A+ + D + + VSW +++ Y QN F GV+ +F S
Sbjct: 102 SKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
SVL AC+ + L +G+ VH V V + EG++FV + LV MY KC D++ F+++PER
Sbjct: 162 SVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER 221
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
N+V WNA+ Y A+ F EM + PN +L +++AC+ +G K
Sbjct: 222 NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK--PNEFSLSSMVNACTGLRDSSRG-K 278
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + +K G +VD+ + G + A + +++ +P I W A++ C ++
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Query: 397 GKPE 400
E
Sbjct: 338 EHHE 341
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/586 (42%), Positives = 360/586 (61%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FT + KA + G+Q+H +K+ D ++ DMY+K GL
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD +P+R+L WNA IS G + A+ F +R+ G + + T A L +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + RQ+H + GF + V NGL+D Y KC+ + A VF+ + +++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAF 473
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Q E+ ++F+ R+G++P F++SS+L+ACA ++ E G+ VHA +K
Sbjct: 474 TSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++F G+ALV Y KCGSI+DA++AF+ +PE+ +V W+A+IGG A GH AL
Sbjct: 534 RQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDV 593
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M PN++T+ VL AC+ AG V++ + F SM +GI+ EHYAC++DL
Sbjct: 594 FHRMVDEHIS--PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDL 651
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A E++ MP + +VWGALL A RV+ PELGR+AA+ LF L+P SG H
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTH 711
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N +A+ G W++ VRK MKD +KK SW+ +K+++H F D SH R +I
Sbjct: 712 VLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIY 771
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L + M AGY+P+ L+DV++ EK + HHSE++A+AF LI+ P G PIR+
Sbjct: 772 AKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVK 831
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 832 KNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 229/486 (47%), Gaps = 46/486 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + N+F P + K + G QLHALA+ +G D+FV + MY G
Sbjct: 94 MRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIFVANALVAMYGGFGF 150
Query: 61 KDDADKMFDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D+A +FDE ERN +WN +S V R +A+ F + G +P+ F +N
Sbjct: 151 VDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVN 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L+ GR++H ++R+G+D +V N LVD Y K ++ +A VVF + + + VS
Sbjct: 211 ACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVS 270
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W + + V + +++ ++ L + G+ P F +SS+L ACA LGR +H V
Sbjct: 271 WNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMV 330
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + + ++ LVDMY K G + DA+ F+ +P+R+LV WNA+I G +H ALS
Sbjct: 331 KANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALS 390
Query: 300 SFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKI--------FYSMT-------- 342
F MR E N TL VL + + A+ ++ F S +
Sbjct: 391 LF---CRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLID 447
Query: 343 -------LKYGIKPGAEH-------YACVVDLLGRAGLVDRAYEIIKEM---PMRPTISV 385
L Y + +H + ++ L + + A ++ EM + P V
Sbjct: 448 SYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFV 507
Query: 386 WGALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+LLNAC E G+ +L K + +GN ++ + +A G E+ADL
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYT--YAKCGSIEDADLAFSG 565
Query: 443 MKDVGI 448
+ + G+
Sbjct: 566 LPEKGV 571
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 224/450 (49%), Gaps = 12/450 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN+F F C+ A + G+++HA+ +++G DVF + DMYSK G A
Sbjct: 198 VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAA 257
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F ++PE ++ +WNA+IS VL G ++A++ + ++ +G P++ T + L AC+
Sbjct: 258 VVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSG 317
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LGRQ+HGF+V++ D + + GLVD Y K + AK VFD I ++ V W +++
Sbjct: 318 AFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALIS 377
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ +F R+EG + +++VL + A + + R VHA+A K
Sbjct: 378 GCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLS 437
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V + L+D Y KC + A F K +++ + ++I + H + A+ F EM
Sbjct: 438 DSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEM- 496
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+R P+ L +L+AC+ A E+G ++ ++ +K +V + G
Sbjct: 497 -LRKGLDPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRQFMSDVFAGNALVYTYAKCG 554
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLLS 424
++ A +P + +S W A++ +G G+ A D ++ D + S NH+ ++
Sbjct: 555 SIEDADLAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHITMT 610
Query: 425 NMFAA---TGRWEEADLVRKEMKDV-GIKK 450
++ A G +EA MK++ GI++
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIER 640
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 14/385 (3%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T L +A + G +HA LKSG + VF YSK L A ++FDE+
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSG-LFAVFRN-HLLSFYSKCRLPGSARRVFDEI 63
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P+ +W++ ++ P++A+ AF ++R + L D G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGT 120
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSMLVVYVQN 190
QLH + +G G++ V N LV YG V A++VFD ++N VSW ++ YV+N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ ++F GV+P +F S V++AC LE GR VHA+ ++ + ++F
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ALVDMY K G I+ A + F K+PE ++V WNA I G GH AL +M S
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS--SG 298
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVD 368
VPN TL +L AC+ +GA G +I M +++Y +VD+ + GL+D
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMV---KANADSDNYIAFGLVDMYAKHGLLD 355
Query: 369 RAYEIIKEMPMRPTISVWGALLNAC 393
A ++ +P R + +W AL++ C
Sbjct: 356 DAKKVFDWIPQRDLV-LWNALISGC 379
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 11/277 (3%)
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
SLLQ G +H L++SG N L+ FY KC G A+ VFD I D VSW S++
Sbjct: 19 SLLQ-GAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y N + F + R V +F++ VL CA AG G +HA+A+ +
Sbjct: 76 TAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAG--FGTQLHALAMATGLG 132
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
G+IFV +ALV MYG G + +A + F++ ERN V WN ++ Y A+ F E
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGE 192
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN CV++AC+ + +E G K+ ++M ++ G +VD+ +
Sbjct: 193 MVWGGVQ--PNEFGFSCVVNACTGSRDLEAGRKV-HAMVIRTGYDKDVFTANALVDMYSK 249
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G + A + ++P +S W A ++ C ++G +
Sbjct: 250 LGDIRMAAVVFGKVPETDVVS-WNAFISGCVLHGHDQ 285
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/574 (43%), Positives = 369/574 (64%), Gaps = 7/574 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L K + L+ GK +HAL L S D+ + + ++Y+K G A K+FDEM R+
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS---DCSLLQLGRQ 132
+ TW A I+ RP++A+ + R G +P+ T + L A S +LQ GRQ
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GRQ 139
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LHG +R G+D NV V ++D Y +C+ + A+++FD ++ KN+VSW +++ Y + +
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ +F RE V+P F SSVL ACA + LE G+ VHA+ +K + FVG+
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMY K GSI+DA+ F+++ +R++V WN+++ GY+ G +AL FEEM +R
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEM--LRTRIA 317
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN +T +CVL+ACS AG +++G + ++ M KY ++P HY +VDLLGRAG +DRA +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEG-RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
I EMP++PT +VWGALL ACR++ ELG AA+ +F+LD + G HVLL N++A GR
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W +A VRK MK+ G+KK CSW+ ++N +H+F A D +H + EI M ++ +++K
Sbjct: 437 WNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKE 496
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
GY+PD++ L ++++E+ ++ +HSEK+ALAF L+ PPG IRI KN+RICGDCHSA
Sbjct: 497 IGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSA 556
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
FKF+S +V RE+IVRD NRFH F DG CSC DYW
Sbjct: 557 FKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 5/304 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIP--VTGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
M R + PN FT L KA+S + + G+QLH L L+ G +V+V C+ DMY++
Sbjct: 107 MLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARC 166
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
++A +FD M +N +WNA I+ G+ A F N+ R +P T+ + L
Sbjct: 167 HHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVL 226
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC+ L+ G+ +H +++ G V N L+D Y K + AK VFD + ++ V
Sbjct: 227 CACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVV 286
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SML Y Q+ + Q F R + P D VL+AC+ L+ GR +
Sbjct: 287 SWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM 346
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMA 297
K VE I +VD+ G+ G + A ++MP + W A++G A + H +M
Sbjct: 347 KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLG--ACRMHKNME 404
Query: 298 LSSF 301
L +
Sbjct: 405 LGGY 408
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 16/234 (6%)
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
++L C + L G+ +HA+ + + ++ + + L+++Y KCG + A F++M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE--KG 334
++V W A+I GY+ AL EM +R PN TL +L A S G+ + +G
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEM--LRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
++ + + L+YG ++D+ R ++ A I M + +S W AL+
Sbjct: 138 RQL-HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS-WNALIAGYA 195
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA--------TGRWEEADLVR 440
G+ + N+ + N H S++ A G+W A +++
Sbjct: 196 RKGQGDKAFCLFSNMLR--ENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK 247
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/586 (42%), Positives = 359/586 (61%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +PN FTF + KA L GK +H LK+ D++VG D+Y+K G
Sbjct: 133 MRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGD 192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D ++F+EMP+ ++ W+ IS + + A++ F +RR P+ TF + L +
Sbjct: 193 ANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQS 252
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQLG+Q+H +++ G DGNV V N L+D Y KC + + +F + ++N+V+W
Sbjct: 253 CASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTW 312
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V YVQ+ + + ++ V+ + SSVL ACA +A +ELG +H++++K
Sbjct: 313 NTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLK 372
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ VG+AL+DMY KCGSI++A + F+ + ER+ + WNA+I GY+ G AL +
Sbjct: 373 TIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKA 432
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M C VPN +T V +LSACS AG ++ G F SM YGI+P EHY C+V L
Sbjct: 433 FQMMQETEC--VPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWL 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G +D+A ++I+E+P+ P + VW ALL AC ++ +LG ++A + ++DP D H
Sbjct: 491 LGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATH 550
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A T RW VRK MK+ G+KK G SWI + +H F DTSH I
Sbjct: 551 VLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMIS 610
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML L + + AGY+PD N L DVE++EK + HSE++ALAFGLI P IRI
Sbjct: 611 GMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRIL 670
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCHSA K IS IV R++I+RD NRFH F DG CSC DYW
Sbjct: 671 KNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 198/397 (49%), Gaps = 4/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE N F F + K ++ LHA K G + FVG + D Y+ G
Sbjct: 32 VHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGS 91
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A + FD + +++ +W ++ R ++++ F +R G P+ TF L A
Sbjct: 92 VNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA 151
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +G+ +HG ++++ ++ ++ V GL+D Y K + VF+ + + + W
Sbjct: 152 CIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPW 211
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y Q+ + ++F RR V P F +SVL +CA I L+LG+ VH +K
Sbjct: 212 SFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLK 271
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++GN+FV +AL+D+Y KCG + ++ F ++P RN V WN +I GY G D ALS
Sbjct: 272 VGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSL 331
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
++ M + C+ + VT VL AC+ A+E G +I +S++LK ++D+
Sbjct: 332 YKNM--LECQVQASEVTYSSVLRACASLAAMELGTQI-HSLSLKTIYDKDVVVGNALIDM 388
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A + + R IS W A+++ ++G
Sbjct: 389 YAKCGSIKNARLVFDMLSERDEIS-WNAMISGYSMHG 424
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 4/320 (1%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
MP+RN ++ I V + +D F + R G E + F L +L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
LH + + G + N V L+D Y C V A+ FD I K+ VSW M+ Y +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
++ Q+F R G P F + VL AC + +G+SVH +K C E +++VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
L+D+Y K G D F +MP+ +++ W+ +I YA + A+ F +M R
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR--RAF 238
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+PN T VL +C+ ++ G ++ + LK G+ ++D+ + G +D +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQV-HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 371 YEIIKEMPMRPTISVWGALL 390
++ E+P R ++ W ++
Sbjct: 298 MKLFMELPNRNEVT-WNTMI 316
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/595 (42%), Positives = 368/595 (61%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + PN TFPC K+ SAL +G+Q H AL G D+FV + DMYSK G
Sbjct: 143 MRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGE 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN--LRRTGGE------PDLI 112
DA +FDE+ RN+ +W + I+ V A+ F + +G E D I
Sbjct: 203 LRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPI 262
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L+ACS S + +HGFL++ GF+G++ V N L+D Y KC E+G+++ VFDG+
Sbjct: 263 AMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGM 322
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELG 231
+++ +SW S++ VY QN ++F ++G + +S+VL ACA LG
Sbjct: 323 AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLG 382
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H +K +E N+FVG++++DMY KCG ++ A AF++M E+N+ W+A++ GY
Sbjct: 383 KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMH 442
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GHA AL F EM + PNY+T V VL+ACS AG +E+G F +M+ ++ ++PG
Sbjct: 443 GHAKEALEVFYEMNMAGVK--PNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGV 500
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGRAG + A+++IK M +RP VWGALL ACR++ +LG I+A LF+
Sbjct: 501 EHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE 560
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP + G +VLLSN++A GRWE+ + +R MK+ G+ K G S + +K R+H+F D
Sbjct: 561 LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDR 620
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H ++ +I L KL +++ GY+PD L+DV EEK + HSEK+A+AFG++
Sbjct: 621 EHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNT 680
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I I KNLR+CGDCH+A KFIS IV RE++VRD+ RFH F DG CSC DYW
Sbjct: 681 VPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 13/351 (3%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
N+ +WN+ I+ G A+ AF ++R+ +P+ TF + +CS L GRQ H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
+ GF+ ++ V + LVD Y KC E+ A+ +FD I +N VSW SM+ YVQN +
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 195 NGCQMF--LTARREGVE------PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+F G E + SVLSAC+R++ + VH +K EG+
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ V + L+D Y KCG + + F+ M ER+++ WN+II YA G + ++ F M
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E N VTL VL AC+ +G+ G K + +K G++ ++D+ + G
Sbjct: 356 -DGEINYNAVTLSAVLLACAHSGSQRLG-KCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 413
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYG--KPELGRIAADNLFKLDPN 415
V+ A + M + + W A++ ++G K L N+ + PN
Sbjct: 414 VEMARKAFDRMREK-NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 14/260 (5%)
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQ 198
SGF S+C G V N L +F+ +DK +V SW S++ ++ + +
Sbjct: 80 SGFSKRRSICAGAVLRRRYSNNPNLT-TLFNKYVDKTNVFSWNSVIAELARSGDSVEALR 138
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F + R+ ++P + +C+ + L GR H A+ E ++FV SALVDMY
Sbjct: 139 AFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYS 198
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC------EAV 312
KCG ++DA F+++ RN+V W ++I GY A AL F+E E
Sbjct: 199 KCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVC 258
Query: 313 PNYVTLVCVLSACSRAG--AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+ + +V VLSACSR ++ +G+ F +K G + ++D + G + +
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGF---LIKRGFEGDLGVENTLMDAYAKCGELGVS 315
Query: 371 YEIIKEMPMRPTISVWGALL 390
+ M R IS W +++
Sbjct: 316 RRVFDGMAERDVIS-WNSII 334
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/587 (43%), Positives = 351/587 (59%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN F + KA + G+Q+H +K+ D ++G DMY+K
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD M R+L WNA IS GGR A F LR+ G + T A L +
Sbjct: 354 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ RQ+H + GF + V NGL+D Y KC+ + A VF+ + ++
Sbjct: 414 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 473
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Q E ++F+ R+G+EP F++SS+L+ACA ++ E G+ VHA +K
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ F G+ALV Y KCGSI+DAE+AF+ +PER +V W+A+IGG A GH AL
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + PN++T+ VL AC+ AG V++ + F SM +GI EHY+C++D
Sbjct: 594 FGRMVD---EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A E++ MP + SVWGALL A RV+ PELG++AA+ LF L+P SG
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLL+N +A++G W E VRK MKD IKK SW+ VK+++H F D SH EI
Sbjct: 711 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 770
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L +L + M AGYIP+ + L+D++ EK + HHSE++A+AF L++ PPG PIR+
Sbjct: 771 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 831 KKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 227/486 (46%), Gaps = 46/486 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+F P + K + G Q+HA+A+ +G DVFV + MY G
Sbjct: 94 MRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 150
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA ++FDE ERN +WN +S V + +AI F + +G +P F +N
Sbjct: 151 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ + GRQ+H +VR G++ +V N LVD Y K V +A V+F+ + D + VS
Sbjct: 211 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 270
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ V N + ++ L + G+ P FM+SS+L ACA +LGR +H +
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 330
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + + ++G LVDMY K + DA F+ M R+L+ WNA+I G +H G D A S
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 390
Query: 300 SFEEMTSMRCEAVP-NYVTLVCVL---------SACSRAGAVEKGMKIFYSMTLKYGIKP 349
F +R E + N TL VL SA + A+ + + + + G+
Sbjct: 391 IF---YGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447
Query: 350 GAEHYACVVD---------------------LLGRAGLVDRAYEIIKEM---PMRPTISV 385
+C+ D L + + A ++ EM + P V
Sbjct: 448 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 507
Query: 386 WGALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+LLNAC E G+ +L K + +GN ++ + +A G E+A+L
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT--YAKCGSIEDAELAFSS 565
Query: 443 MKDVGI 448
+ + G+
Sbjct: 566 LPERGV 571
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 214/445 (48%), Gaps = 11/445 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F F C+ A + G+Q+HA+ ++ G DVF + DMY K G D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP+ ++ +WNA IS VL G AI+ + ++ +G P++ + L AC+
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LGRQ+HGF++++ D + + GLVD Y K + + A VFD + ++ + W +++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ +F R+EG+ +++VL + A + R VHA+A K
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V + L+D Y KC + DA F + +++ ++I + H + A+ F EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEM- 496
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+R P+ L +L+AC+ A E+G ++ ++ +K A +V + G
Sbjct: 497 -LRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRQFMSDAFAGNALVYTYAKCG 554
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLLS 424
++ A +P R +S W A++ +G G+ A + ++ D + NH+ ++
Sbjct: 555 SIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMT 610
Query: 425 NMFAA---TGRWEEADLVRKEMKDV 446
++ A G +EA MK++
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEM 635
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 206/427 (48%), Gaps = 17/427 (3%)
Query: 17 FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
+ A+ AL + G LHA LKSG + + +F YSK A ++FDE+P+
Sbjct: 14 YAAAQAL---LPGAHLHANLLKSGFLASLRNHLISF--YSKCRRPCCARRVFDEIPDPCH 68
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+W++ ++ G P++AI AF +R G + L D QLG Q+H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAM 125
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSMLVVYVQNYEEEN 195
+ +GF +V V N LV YG + A+ VFD ++N VSW ++ YV+N + +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD 185
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
Q+F G++P +F S V++AC ++ GR VHA+ V+ E ++F +ALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVD 245
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY K G + A + F KMP+ ++V WNA+I G GH A+ +M S VPN
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS--SGLVPNV 303
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
L +L AC+ AGA + G +I + +K +VD+ + +D A ++
Sbjct: 304 FMLSSILKACAGAGAFDLGRQI-HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFD 362
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG-NHVLLSNMFAATGRWE 434
M R I +W AL++ C G+ + A + L G N L+ + +T E
Sbjct: 363 WMSHRDLI-LWNALISGCSHGGRHDE---AFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 418
Query: 435 EADLVRK 441
A R+
Sbjct: 419 AASATRQ 425
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/587 (43%), Positives = 352/587 (59%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FT + KA S G+Q+H +K+ D ++G DMY+K
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD M R+L NA IS GGR A+ F LR+ G + T A L +
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ RQ+H V+ GF + V NGL+D Y KC+ + A VF+ + ++
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Q E ++F+ R+G+EP F++SS+L+ACA ++ E G+ VHA +K
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ F G+ALV Y KCGSI+DAE+AF+ +PER +V W+A+IGG A GH AL
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + PN++T+ VL AC+ AG V++ + F SM +GI EHY+C++D
Sbjct: 594 FGRMVD---EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A E++ MP + S+WGALL A RV+ PELG++AA+ LF L+P SG
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLL+N +A+ G W E VRK MKD IKK SWI VK+++H F D SH EI
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L +L + M AG++P+ + L+D++ EK + HHSE++A+AF L++ PPG PIR+
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 831 KKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 226/487 (46%), Gaps = 48/487 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+F P + K + G Q+HA+A+ +G DVFV + MY G
Sbjct: 94 MRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 150
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA ++F+E ERN +WN +S V + +AI F + +G +P F +N
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ ++ GRQ+H +VR G+D +V N LVD Y K V +A V+F+ + D + VS
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ V N + ++ L + G+ P F +SS+L AC+ +LGR +H +
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + + ++G LVDMY K + DA F+ M R+L+ NA+I G +H G D ALS
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 300 SFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F E +R E + N TL VL + + A ++ +++ +K G A ++
Sbjct: 391 LFYE---LRKEGLGVNRTTLAAVLKSTASLEAASTTRQV-HALAVKIGFIFDAHVVNGLI 446
Query: 359 DLLGRAGLVDRAYEIIKEMP----------------------------------MRPTIS 384
D + + A + +E + P
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 385 VWGALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
V +LLNAC E G+ +L K + +GN ++ + +A G E+A+L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT--YAKCGSIEDAELAFS 564
Query: 442 EMKDVGI 448
+ + G+
Sbjct: 565 SLPERGV 571
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F F C+ A + G+Q+HA+ ++ G DVF + DMY K G D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP+ ++ +WNA IS VL G AI+ + ++ +G P++ T + L ACS
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LGRQ+HGF++++ D + + GLVD Y K + + A+ VFD + + D+ C+ L+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR-DLILCNALI 376
Query: 186 VYVQN-YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
+ + +F R+EG+ +++VL + A + R VHA+AVK
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V + L+D Y KC + DA F + +++ ++I + H + A+ F EM
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+R P+ L +L+AC+ A E+G ++ ++ +K A +V +
Sbjct: 497 --LRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLL 423
G ++ A +P R +S W A++ +G G+ A + ++ D + NH+ +
Sbjct: 554 GSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITM 609
Query: 424 SNMFAA---TGRWEEADLVRKEMKDV 446
+++ A G +EA MK++
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEM 635
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 205/427 (48%), Gaps = 17/427 (3%)
Query: 17 FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
+ A+ AL + G LHA LKSG + +F YSK A ++FDE+P+
Sbjct: 14 YAAAQAL---LPGAHLHASLLKSGSLASFRNHLISF--YSKCRRPCCARRVFDEIPDPCH 68
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+W++ ++ G P++AI AF +R G + L D +LG Q+H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAM 125
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF-DGIIDKNDVSWCSMLVVYVQNYEEEN 195
+ +GF +V V N LV YG + A+ VF + ++N VSW ++ YV+N + +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
Q+F G++P +F S V++AC +E GR VHA+ V+ + ++F +ALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY K G + A + F KMP+ ++V WNA+I G GH A+ +M VPN
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK--YSGLVPNV 303
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
TL +L ACS AGA + G +I + +K +VD+ + +D A ++
Sbjct: 304 FTLSSILKACSGAGAFDLGRQI-HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFD 362
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG-NHVLLSNMFAATGRWE 434
M R I + AL++ C G+ + A ++L G N L+ + +T E
Sbjct: 363 WMFHRDLI-LCNALISGCSHGGRHDE---ALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 435 EADLVRK 441
A R+
Sbjct: 419 AASTTRQ 425
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/587 (43%), Positives = 351/587 (59%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN F + KA + G+Q+H +K+ D ++G DMY+K
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD M R+L WNA IS GGR A F LR+ G + T A L +
Sbjct: 261 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ RQ+H + GF + V NGL+D Y KC+ + A VF+ + ++
Sbjct: 321 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 380
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Q E ++F+ R+G+EP F++SS+L+ACA ++ E G+ VHA +K
Sbjct: 381 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 440
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ F G+ALV Y KCGSI+DAE+AF+ +PER +V W+A+IGG A GH AL
Sbjct: 441 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 500
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + PN++T+ VL AC+ AG V++ + F SM +GI EHY+C++D
Sbjct: 501 FGRMVD---EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 557
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A E++ MP + SVWGALL A RV+ PELG++AA+ LF L+P SG
Sbjct: 558 LLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 617
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLL+N +A++G W E VRK MKD IKK SW+ VK+++H F D SH EI
Sbjct: 618 HVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 677
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L +L + M AGYIP+ + L+D++ EK + HHSE++A+AF L++ PPG PIR+
Sbjct: 678 YSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 737
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 738 KKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 227/486 (46%), Gaps = 46/486 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+F P + K + G Q+HA+A+ +G DVFV + MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA ++FDE ERN +WN +S V + +AI F + +G +P F +N
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ + GRQ+H +VR G++ +V N LVD Y K V +A V+F+ + D + VS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ V N + ++ L + G+ P FM+SS+L ACA +LGR +H +
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + + ++G LVDMY K + DA F+ M R+L+ WNA+I G +H G D A S
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297
Query: 300 SFEEMTSMRCEAVP-NYVTLVCVL---------SACSRAGAVEKGMKIFYSMTLKYGIKP 349
F +R E + N TL VL SA + A+ + + + + G+
Sbjct: 298 IF---YGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354
Query: 350 GAEHYACVVD---------------------LLGRAGLVDRAYEIIKEM---PMRPTISV 385
+C+ D L + + A ++ EM + P V
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFV 414
Query: 386 WGALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+LLNAC E G+ +L K + +GN ++ + +A G E+A+L
Sbjct: 415 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT--YAKCGSIEDAELAFSS 472
Query: 443 MKDVGI 448
+ + G+
Sbjct: 473 LPERGV 478
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 214/445 (48%), Gaps = 11/445 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F F C+ A + G+Q+HA+ ++ G DVF + DMY K G D A
Sbjct: 105 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 164
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP+ ++ +WNA IS VL G AI+ + ++ +G P++ + L AC+
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 224
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LGRQ+HGF++++ D + + GLVD Y K + + A VFD + ++ + W +++
Sbjct: 225 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ +F R+EG+ +++VL + A + R VHA+A K
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V + L+D Y KC + DA F + +++ ++I + H + A+ F EM
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEM- 403
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+R P+ L +L+AC+ A E+G ++ ++ +K A +V + G
Sbjct: 404 -LRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRQFMSDAFAGNALVYTYAKCG 461
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLLS 424
++ A +P R +S W A++ +G G+ A + ++ D + NH+ ++
Sbjct: 462 SIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMT 517
Query: 425 NMFAA---TGRWEEADLVRKEMKDV 446
++ A G +EA MK++
Sbjct: 518 SVLCACNHAGLVDEAKRYFNSMKEM 542
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/587 (43%), Positives = 352/587 (59%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FT + KA S G+Q+H +K+ D ++G DMY+K
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD M R+L NA IS GGR A+ F LR+ G + T A L +
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ RQ+H V+ GF + V NGL+D Y KC+ + A VF+ + ++
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Q E ++F+ R+G+EP F++SS+L+ACA ++ E G+ VHA +K
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ F G+ALV Y KCGSI+DAE+AF+ +PER +V W+A+IGG A GH AL
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + PN++T+ VL AC+ AG V++ + F SM +GI EHY+C++D
Sbjct: 594 FGRMVD---EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMID 650
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A E++ MP + S+WGALL A RV+ PELG++AA+ LF L+P SG
Sbjct: 651 LLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGT 710
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLL+N +A+ G W E VRK MKD IKK SWI VK+++H F D SH EI
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L +L + M AG++P+ + L+D++ EK + HHSE++A+AF L++ PPG PIR+
Sbjct: 771 YAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRV 830
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 831 KKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 226/487 (46%), Gaps = 48/487 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+F P + K + G Q+HA+A+ +G DVFV + MY G
Sbjct: 94 MRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 150
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA ++F+E ERN +WN +S V + +AI F + +G +P F +N
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ ++ GRQ+H +VR G+D +V N LVD Y K V +A V+F+ + D + VS
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ V N + ++ L + G+ P F +SS+L AC+ +LGR +H +
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + + ++G LVDMY K + DA F+ M R+L+ NA+I G +H G D ALS
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 300 SFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F E +R E + N TL VL + + A ++ +++ +K G A ++
Sbjct: 391 LFYE---LRKEGLGVNRTTLAAVLKSTASLEAASTTRQV-HALAVKIGFIFDAHVVNGLI 446
Query: 359 DLLGRAGLVDRAYEIIKEMP----------------------------------MRPTIS 384
D + + A + +E + P
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 385 VWGALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
V +LLNAC E G+ +L K + +GN ++ + +A G E+A+L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT--YAKCGSIEDAELAFS 564
Query: 442 EMKDVGI 448
+ + G+
Sbjct: 565 SLPERGV 571
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F F C+ A + G+Q+HA+ ++ G DVF + DMY K G D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP+ ++ +WNA IS VL G AI+ + ++ +G P++ T + L ACS
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LGRQ+HGF++++ D + + GLVD Y K + + A+ VFD + + D+ C+ L+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR-DLILCNALI 376
Query: 186 VYVQN-YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
+ + +F R+EG+ +++VL + A + R VHA+AVK
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V + L+D Y KC + DA F + +++ ++I + H + A+ F EM
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+R P+ L +L+AC+ A E+G ++ ++ +K A +V +
Sbjct: 497 --LRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLL 423
G ++ A +P R +S W A++ +G G+ A + ++ D + NH+ +
Sbjct: 554 GSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITM 609
Query: 424 SNMFAA---TGRWEEADLVRKEMKDV 446
+++ A G +EA MK++
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEM 635
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 204/427 (47%), Gaps = 17/427 (3%)
Query: 17 FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
+ A+ AL + G LHA LKSG + +F YSK A + FDE+P+
Sbjct: 14 YAAAQAL---LPGAHLHASLLKSGSLASFRNHLISF--YSKCRRPCCARRFFDEIPDPCH 68
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+W++ ++ G P++AI AF +R G + L D +LG Q+H
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAM 125
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF-DGIIDKNDVSWCSMLVVYVQNYEEEN 195
+ +GF +V V N LV YG + A+ VF + ++N VSW ++ YV+N + +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
Q+F G++P +F S V++AC +E GR VHA+ V+ + ++F +ALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY K G + A + F KMP+ ++V WNA+I G GH A+ +M VPN
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK--YSGLVPNV 303
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
TL +L ACS AGA + G +I + +K +VD+ + +D A ++
Sbjct: 304 FTLSSILKACSGAGAFDLGRQI-HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFD 362
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG-NHVLLSNMFAATGRWE 434
M R I + AL++ C G+ + A ++L G N L+ + +T E
Sbjct: 363 WMFHRDLI-LCNALISGCSHGGRHDE---ALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 435 EADLVRK 441
A R+
Sbjct: 419 AASTTRQ 425
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/609 (41%), Positives = 366/609 (60%), Gaps = 33/609 (5%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N TF L +S G+Q+H +K G + VFVG DMYSK G+ A K+F
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 69 DEMPERNLA-------------------------------TWNAYISNAVLGGRPKNAID 97
DE+PE+N+ +W + I+ G ++AID
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 261
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
F ++ + D TF + L AC LQ G+Q+H +++R+ + N+ V + LVD Y
Sbjct: 262 IFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYC 321
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC + A+ VF + KN VSW +MLV Y QN E + F ++ G+EP DF + S
Sbjct: 322 KCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 381
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
V+S+CA +A LE G HA A+ + + I V +ALV +YGKCGSI+D+ FN++ ++
Sbjct: 382 VISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKD 441
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
V W A++ GYA G A+ + FE M + + P+ VT + VLSACSRAG VEKG +I
Sbjct: 442 EVTWTALVSGYAQFGKANETIGLFESMLAHGLK--PDKVTFIGVLSACSRAGLVEKGNQI 499
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
F SM ++GI P +HY C++DL RAG ++ A I +MP P W LL++CR YG
Sbjct: 500 FESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
++G+ AA+ L +LDP+++ ++VLLS+++AA G+WEE +RK+M+D G++K GCSWI
Sbjct: 560 NMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWI 619
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
KN++H+F A D S+ + +I + L KL +M GY+PD N L+DV + EK+ + H
Sbjct: 620 KYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNH 679
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSEK+A+AFGL+ IPPG+PIR+ KNLR+C DCH+A K+IS I RE++VRD RFH F D
Sbjct: 680 HSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKD 739
Query: 578 GYCSCSDYW 586
G CSC D+W
Sbjct: 740 GTCSCGDFW 748
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 207/447 (46%), Gaps = 68/447 (15%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L K H K LH+ +K+ + F+ + Y+K G A K+FD+MP N
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 76 LATWNAYIS--------------------------NAVLGGRP-----KNAIDAFINLRR 104
L +WN +S N+++ G ++ A+ + +
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 105 TGGEPDL--ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
G +L ITF L S ++LGRQ+HG +V+ GF V V + LVD Y K +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 163 GLAKVVFDGIIDKN-------------------------------DVSWCSMLVVYVQNY 191
A+ VFD + +KN +SW SM+ + QN
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ + +F + E ++ + SVL+AC + L+ G+ VHA ++ + NIFV S
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS 314
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVDMY KC +I+ AE F KM +N+V W A++ GY G+++ A+ +F +M E
Sbjct: 315 ALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE- 373
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ TL V+S+C+ ++E+G + F++ L G+ +V L G+ G ++ ++
Sbjct: 374 -PDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGK 398
+ E+ + ++ W AL++ +GK
Sbjct: 432 RLFNEISFKDEVT-WTALVSGYAQFGK 457
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 158/328 (48%), Gaps = 6/328 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + + +TF + A + GKQ+HA +++ ++FV + DMY K
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKN 325
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F +M +N+ +W A + G + A+ F ++++ G EPD T + +++
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG ++V N LV YGKC + + +F+ I K++V+W
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTW 445
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y Q + +F + G++P VLSAC+R +E G + +
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505
Query: 241 ACVEGNIFVG---SALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
G + + + ++D++ + G I++A NKMP + + W ++ G+ D+
Sbjct: 506 E--HGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDI 563
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ E + + +YV L V +A
Sbjct: 564 GKWAAEFLMELDPHNTASYVLLSSVYAA 591
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 132/339 (38%), Gaps = 64/339 (18%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+CA L C + + LH ++++ + N L+ Y K + A VFD +
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFM------------------ 214
N SW ++L Y + +F RR+GV +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 215 --------------ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
S++L ++ ++LGR +H VK +FVGS LVDMY K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--------TSMRCEAV 312
G I A F+++PE+N+V +N +I G G + + F EM TSM
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 313 PN---------------------YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
N T VL+AC A+++G ++ ++ ++ K
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQV-HAYIIRTDYKDNI 310
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ +VD+ + + A + K+M + +S W A+L
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVS-WTAML 348
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P+ F++++++S+ A++ + V N++ + ++ Y K G + + E
Sbjct: 42 PETFLLNNLISSYAKLGSIPYACKV----FDQMPHPNLYSWNTILSAYSKLGRVSEMEYL 97
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ MP R+ V WN++I GYA G ++ ++ M N +T +L S+ G
Sbjct: 98 FDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRG 157
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V+ G +I + +K+G + +VD+ + G++ A ++ E+P + + ++ L
Sbjct: 158 CVKLGRQI-HGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVV-MYNTL 215
Query: 390 LNACRVYGKPELGRIAADN--LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ G GR+ F++ DS + + F G +A + +EMK
Sbjct: 216 -----IMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMK 267
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/588 (42%), Positives = 356/588 (60%), Gaps = 4/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKT 58
M+ + PN FT + KA + +Q+H +K+ D ++G + DMY+K
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKY 353
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
GL DDA K+F+ +P ++L WNA IS GG ++ F +R+ G + + T A L
Sbjct: 354 GLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+ + + Q+H + GF + V NGL+D Y KCN + A VF+ N +
Sbjct: 414 KSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNII 473
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
++ SM+ Q E+ ++F+ R+G+EP F++SS+L+ACA ++ E G+ VHA
Sbjct: 474 AFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 533
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K ++F G+ALV Y KCGSI+DA++AF+ +P++ +V W+A+IGG A GH AL
Sbjct: 534 IKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRAL 593
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M R PN++TL VL AC+ AG V++ F SM +GI EHY+C++
Sbjct: 594 DVFRRMVDERI--APNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMI 651
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D A E++ MP +VWGALL A RV+ PELG++AA+ LF L+P SG
Sbjct: 652 DLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSG 711
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
HVLL+N +A+ G W+E VRK MKD +KK SW+ +K+R+H F D SH R +
Sbjct: 712 THVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARD 771
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I A L +L + M AGY+P+ L+DV++ EK + HHSE++A+AF LI+ P G PIR
Sbjct: 772 IYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIR 831
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ KNLRIC DCH AFKFIS IV RE+I+RD NRFH F DG CSC DYW
Sbjct: 832 VKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 180/392 (45%), Gaps = 17/392 (4%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E ISP L +A G +HA LKSG +H +F YSK L
Sbjct: 5 ESISP-------LLTRYAATQSLFLGAHIHAHLLKSGLLHAFRNHLLSF--YSKCRLPGS 55
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE P+ +W++ ++ P+ A+ AF +R G + L D
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD 115
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-GIIDKNDVSWCS 182
L G Q+H V +G G++ V N LV YG V A+ VFD D+N VSW
Sbjct: 116 AGL---GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNG 172
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ +V+N + ++F GV P +F S V++AC LE GR VHA+ V+
Sbjct: 173 MMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTG 232
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++F +ALVDMY K G I A + F K+P+ ++V WNA I G GH AL
Sbjct: 233 YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLL 292
Query: 303 EMTSMRCEAVPNYVTLVCVLS-ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M S VPN TL +L + + +K +VD+
Sbjct: 293 QMKS--SGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMY 350
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ GL+D A ++ + +P R + +W AL++ C
Sbjct: 351 AKYGLLDDARKVFEWIP-RKDLLLWNALISGC 381
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 216/447 (48%), Gaps = 13/447 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN+F F C+ A + G+++HA+ +++G DVF + DMYSK G A
Sbjct: 198 VRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAA 257
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN--ACSD 123
+F ++P+ ++ +WNA+IS VL G ++A++ + ++ +G P++ T + L A +
Sbjct: 258 LVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAG 317
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
LGRQ+HGF++++ D + + LVD Y K + A+ VF+ I K+ + W ++
Sbjct: 318 AGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNAL 377
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ +F R+EG + +++VL + A + + VHA+A K
Sbjct: 378 ISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF 437
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ V + L+D Y KC ++ A F + N++ + ++I + H + A+ F E
Sbjct: 438 LSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFME 497
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M +R P+ L +L+AC+ A E+G ++ ++ +K +V +
Sbjct: 498 M--LRKGLEPDPFVLSSLLNACASLSAYEQGKQV-HAHLIKRKFMTDVFAGNALVYTYAK 554
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVL 422
G ++ A +P + +S W A++ +G G+ A D ++ D + NH+
Sbjct: 555 CGSIEDADLAFSGLPDKGVVS-WSAMIGGLAQHGH---GKRALDVFRRMVDERIAPNHIT 610
Query: 423 LSNMFAA---TGRWEEADLVRKEMKDV 446
L+++ A G +EA MK++
Sbjct: 611 LTSVLCACNHAGLVDEAKGYFSSMKEM 637
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/579 (41%), Positives = 358/579 (61%), Gaps = 2/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF L A + + G+++H K+G + VG S MY+K G A +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++PE+N+ TW I+ G+ A++ +++ P+ IT+ + L C+ L
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G+++H ++++SG+ + V N L+ Y KC + A+ +F + ++ V+W +M+ Y
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q + +F +++G++P +S L++C+ A L+ G+S+H V A ++
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV 434
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
++ SALV MY KCGS+ DA + FN+M ERN+V W A+I G A G AL FE+M
Sbjct: 435 YLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQ 494
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+ VT VLSAC+ G VE+G K F SM L YGIKP EHY+C VDLLGRAG +
Sbjct: 495 GIK--PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A +I MP +P SVWGALL+ACR++ E G AA+N+ KLDP+D G +V LSN++
Sbjct: 553 EEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIY 612
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA GR+E+A+ VR+ M+ + K G SWI V ++H+F +D SH EI A L KL
Sbjct: 613 AAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLT 672
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
E++K GY+PDT F L+DV+EE+K+ + HSE++A+ +GL+ PPG PIRI KNLR+CG
Sbjct: 673 EQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCG 732
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A KFIS +VGRE+I RD +RFH F DG CSC D+W
Sbjct: 733 DCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 197/386 (51%), Gaps = 4/386 (1%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L + + L G+++HA LKSG + ++ + MY+K G DA ++FD +
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+RN+ +W A I V G + A + ++ G +PD +TF + LNA ++ LLQ+G++
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H + ++G + V LV Y KC ++ A+V+FD + +KN V+W ++ Y Q +
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ ++ ++ V P +S+L C LE G+ VH +++ I+V +A
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ MY KCG +++A F +P R++V W A++ GYA G D A+ F M +
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK-- 396
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ +T L++CS +++G I + + G + +V + + G +D A
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSI-HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARL 455
Query: 373 IIKEMPMRPTISVWGALLNACRVYGK 398
+ +M R ++ W A++ C +G+
Sbjct: 456 VFNQMSERNVVA-WTAMITGCAQHGR 480
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 17/317 (5%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR K A+ + G F L C+ L+ GR++H +++SG N +
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+ Y KC + A+ VFDGI D+N VSW +M+ +V + + + T + G +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P S+L+A L++G+ VH KA +E VG++LV MY KCG I A++
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+K+PE+N+V W +I GYA QG D+AL E+M + E PN +T +L C+
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM--QQAEVAPNKITYTSILQGCTTPL 312
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL----GRAGLVDRAYEIIKEMPMRPTISV 385
A+E G K+ +Y I+ G VV+ L + G + A ++ ++P R ++
Sbjct: 313 ALEHGKKVH-----RYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVT- 366
Query: 386 WGALLNACRVYGKPELG 402
W A+ V G +LG
Sbjct: 367 WTAM-----VTGYAQLG 378
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 169/340 (49%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ ++PN T+ + + + GK++H ++SG +++V + MY K G
Sbjct: 289 MQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGG 348
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K+F ++P R++ TW A ++ G AID F +++ G +PD +TF + L +
Sbjct: 349 LKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTS 408
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + LQ G+ +H LV +G+ +V + + LV Y KC + A++VF+ + ++N V+W
Sbjct: 409 CSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAW 468
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+M+ Q+ + F +++G++P +SVLSAC + +E GR ++ +
Sbjct: 469 TAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 528
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
++ + S VD+ G+ G +++AE MP + W A++ +
Sbjct: 529 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGE 588
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ E + + + YV L + +A R EK ++
Sbjct: 589 RAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVM 628
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/589 (42%), Positives = 351/589 (59%), Gaps = 6/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FT + KA + G+Q+H +K+ D FV DMY+K G
Sbjct: 297 MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGF 356
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL--ITFCAFL 118
DDA K+FD MP R+L WNA IS GR + F +R+ G + D+ T + L
Sbjct: 357 LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+ + + RQ+H + G + V NGL+D Y KC ++ A VF + +
Sbjct: 417 KSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDII 476
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
S +M+ Q E+ ++F+ R+G+EP F++SS+L+AC ++ E G+ VHA
Sbjct: 477 SSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K ++F G+ALV Y KCGSI+DA++AF+ +PER +V W+A+IGG A GH AL
Sbjct: 537 IKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRAL 596
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M E V PN++TL VLSAC+ AG V+ K F SM +GI EHYAC+
Sbjct: 597 DLFHRMLD---EGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACM 653
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+D+LGRAG ++ A E++ MP + +VWGALL A RV+ PELGR+AA+ LF L+P S
Sbjct: 654 IDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKS 713
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G HVLL+N +A+ G W+E VRK MKD +KK SW+ +K+++H F D SH
Sbjct: 714 GTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTR 773
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L + M AGY+P+ L+DV+ EK + HHSE++A+AF LI+ P G PI
Sbjct: 774 DIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPI 833
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLRIC DCH AFK+IS IV RE+I+RD NRFH F +G CSC DYW
Sbjct: 834 RVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 228/489 (46%), Gaps = 47/489 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + N+F P + K + + G Q+HALA+ + +HDVFV + +Y G+
Sbjct: 94 MRGRGVPCNEFALPVVLKCAPDVRF---GAQVHALAVATRLVHDVFVANALVAVYGGFGM 150
Query: 61 KDDADKMFDEM----PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
D+A +MFDE ERN +WN IS V + +AI F + +G P+ F
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSC 210
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+NAC+ L+ GRQ+HG +VR+G++ +V N LVD Y K ++ +A VF+ + +
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW + + V + + ++ L + G+ P F +SSVL ACA LGR +H
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
VKA + + FV LVDMY K G + DA F+ MP R+L+ WNA+I G +H G
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
LS F M + N TL VL + + + A+ ++ +++ K G+ +
Sbjct: 391 VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV-HALAEKIGLLSDSHVING 449
Query: 357 VVDLLGRAGLVDRAYEIIKEMP----------------------------------MRPT 382
++D + G +D A ++ KE + P
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPND---SGNHVLLSNMFAATGRWEEADLV 439
V +LLNAC E G+ +L K +GN ++ + +A G E+AD+
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYA--YAKCGSIEDADMA 567
Query: 440 RKEMKDVGI 448
+ + GI
Sbjct: 568 FSGLPERGI 576
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 181/377 (48%), Gaps = 19/377 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G LH+ LKSG + G S +YS+ L A +FDE+P+ +W++ ++
Sbjct: 23 GAHLHSHLLKSG----LLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAY 78
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G P++A+ AF +R G + L D ++ G Q+H V + +V
Sbjct: 79 SNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHDV 135
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGII----DKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
V N LV YG V A+ +FD + ++N VSW +M+ YV+N + + +F
Sbjct: 136 FVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFRE 195
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
G P +F S V++AC LE GR VH V+ E ++F +ALVDMY K G
Sbjct: 196 MVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGD 255
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
I+ A F KMP ++V WNA I G GH AL +M S VPN TL VL
Sbjct: 256 IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKS--SGLVPNVFTLSSVL 313
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC-VVDLLGRAGLVDRAYEIIKEMPMRP 381
AC+ AGA G +I M + E A +VD+ + G +D A ++ MP R
Sbjct: 314 KACAGAGAFNLGRQIHGFMV--KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRD 371
Query: 382 TISVWGALLNACRVYGK 398
I +W AL++ C G+
Sbjct: 372 LI-LWNALISGCSHDGR 387
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/581 (42%), Positives = 355/581 (61%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P+ FT KA +A+ + G+QLH+ +K D FVG DMYSK GL DA
Sbjct: 285 VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDAR 344
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP +++ WN+ IS G A+ F N+ + G E + T L + +
Sbjct: 345 MVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQ 404
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
Q+H ++SG+ + V N L+D YGKC + A VF+ ++ V++ SM+
Sbjct: 405 ANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMIT 464
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q E +M+L + ++P F+ SS+ +ACA ++ E G+ +H +K +
Sbjct: 465 AYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS 524
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++F G++LV+MY KCGSI DA FN++ R +V W+A+IGG A GH AL F +M
Sbjct: 525 DVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQM- 583
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ +PN++TLV VLSAC+ AG V + + F M +GI P EHYAC+VD+LGR G
Sbjct: 584 -LKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVG 642
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+D A ++KEMP + + +VWGALL A R++ ELGR AA+ L L+P SG H+LL+N
Sbjct: 643 RLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLAN 702
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+TG W+ VR+ MK+ +KK G SWI +K++++ F D SH R+ EI L
Sbjct: 703 IYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDD 762
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
LRE + +AGY+P L+DVE+ EK + HHSEK+A+AFGLIA PPG PIR+ KNLR+
Sbjct: 763 LRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRV 822
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+AFKFIS + RE+IVRD NRFH F DG CSC DYW
Sbjct: 823 CIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 207/425 (48%), Gaps = 8/425 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
ISPN+F+ + A + L G ++H +K G D F + DMY+K+G + A
Sbjct: 184 ISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAI 243
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F E+P+ ++ +WNA I+ VL + A+ + P + T + L AC+
Sbjct: 244 AVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIG 303
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L++LGRQLH L++ + + V GL+D Y KC + A++VFD + K+ + W S++
Sbjct: 304 LVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIIS 363
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + +F +EG+E +S++L + A VH +++K+ +
Sbjct: 364 GYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQY 423
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +V ++L+D YGKC ++DA F P +LV + ++I Y+ G + AL + M
Sbjct: 424 DGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQ 483
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ + +AC+ A E+G +I + LK G+ +V++ + G
Sbjct: 484 DRDIK--PDAFIFSSLFNACANLSAYEQGKQI-HVHVLKCGLLSDVFAGNSLVNMYAKCG 540
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLS 424
+D A I E+ R +S W A++ +G GR A +++ N NH+ L
Sbjct: 541 SIDDASCIFNEISWRGIVS-WSAMIGGLAQHGH---GRKALQLFYQMLKNGILPNHITLV 596
Query: 425 NMFAA 429
++ +A
Sbjct: 597 SVLSA 601
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 197/421 (46%), Gaps = 54/421 (12%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
++YSK A K+ + E +L +W+A IS V GR + A+ + + G + +
Sbjct: 90 NLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEF 149
Query: 113 TFCAFLNACSDCSLLQLGRQLH-------------------------------------- 134
TF + L CS L+LG+Q+H
Sbjct: 150 TFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMK 209
Query: 135 --GFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
G+L++ G+D + N L+D Y K C E +A VF I + VSW +++ V +
Sbjct: 210 VHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIA--VFYEIPKPDIVSWNAVIAGCVLH 267
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ + ++ V P F +SS L ACA I ++LGR +H+ +K +E + FVG
Sbjct: 268 EKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG 327
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
L+DMY KCG +QDA + F+ MP ++++ WN+II GY++ G+ A+S F M E
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGM-KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
N TL +L S AG+ G + +++++K G + ++D G+ L++
Sbjct: 388 F--NQTTLSTILK--STAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLED 443
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFA 428
A ++ + P ++ + +++ A YG LG A ++ D + + S++F
Sbjct: 444 AAKVFEVCPAEDLVA-YTSMITAYSQYG---LGEEALKMYLRMQDRDIKPDAFIFSSLFN 499
Query: 429 A 429
A
Sbjct: 500 A 500
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 157/341 (46%), Gaps = 5/341 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + N T + K+++ +Q+H +++KSG +D +V S D Y K L
Sbjct: 381 MYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCL 440
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+F+ P +L + + I+ G + A+ ++ ++ +PD F + NA
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S + G+Q+H +++ G +V N LV+ Y KC + A +F+ I + VSW
Sbjct: 501 CANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSW 560
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Q+ Q+F + G+ P + SVLSAC + R + K
Sbjct: 561 SAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ + +VD+ G+ G + +A + +MP + + W A++G + ++
Sbjct: 621 LFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGR 680
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSAC---SRAGAVEKGMK 336
+ E + ++ E ++ L + ++ V + MK
Sbjct: 681 HAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMK 721
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 44/279 (15%)
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
V+ Y KC +A+ + + + VSW +++ YVQN E + G + +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 213 FMISSVLSACARIAGLELGRSVHAVA---------------------------------- 238
F SSVL C+ LELG+ +H VA
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 239 ------VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+K + + F +AL+DMY K G + A F ++P+ ++V WNA+I G
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
D+AL +M S R P+ TL L AC+ G V+ G ++ +S +K ++P +
Sbjct: 269 KNDLALKLLGKMGSYR--VAPSMFTLSSALKACAAIGLVKLGRQL-HSALMKMDMEPDSF 325
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++D+ + GL+ A + MP + I VW ++++
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMPXKDVI-VWNSIIS 363
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/586 (42%), Positives = 356/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN FT KA + + + G+QLH+ +K D F+G DMYSK
Sbjct: 203 MNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNS 262
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F MPER++ WNA IS + A F + G + T L +
Sbjct: 263 MDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + RQ+H ++SGF+ + V N L+D YGKC V A VF+ + V +
Sbjct: 323 IAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Y Q+ + E +++L + G++P F+ SS+L+ACA ++ E G+ VH +K
Sbjct: 383 TSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+IF G++LV+MY KCGSI+DA AF+++P R +V W+A+IGG A G+ AL
Sbjct: 443 FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQL 502
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M ++ PN++TLV VL AC+ AG V + F SM + +GI+P EHYAC++DL
Sbjct: 503 FKQM--LKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDL 560
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A E++ +MP + VWGALL A R++ +LG AA+ L L+P SG H
Sbjct: 561 LGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTH 620
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+ G W++ VR+ MKD +KK G SW+ VK++++ F D SH R+TEI
Sbjct: 621 VLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIY 680
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L + +K AGY+P L+DVE EK + HHSEK+A+AFGLIA PPG PIR+
Sbjct: 681 AKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVK 740
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+ KFIS IV RE+IVRD NRFH F +G CSC +YW
Sbjct: 741 KNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 222/428 (51%), Gaps = 14/428 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN+F+ + + L V G+++H +K G D F + DMY+K G+ +DA
Sbjct: 107 IRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS 166
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FDE+ + ++ +WNA I+ VL A++ + ++G P++ T + L AC+ +
Sbjct: 167 SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMA 226
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +LGRQLH L++ + + GL+D Y KCN + A++VF + +++ ++W +++
Sbjct: 227 LRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVIS 286
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ QN E+E +F EG+ +S+VL + A + + R +HA+++K+ E
Sbjct: 287 GHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF 346
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +V ++L+D YGKCG ++DA F + P +LV + +++ YA G + AL + EM
Sbjct: 347 DNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQ 406
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ +L+AC+ A E+G ++ + LK+G +V++ + G
Sbjct: 407 DRGIK--PDSFVCSSLLNACASLSAYEQGKQV-HVHILKFGFMSDIFAGNSLVNMYAKCG 463
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN--ACRVYGKPELGRIAADNLFK--LDPNDSGNHV 421
++ A +P+R +S W A++ A YGK L LFK L NH+
Sbjct: 464 SIEDASCAFSRIPVRGIVS-WSAMIGGLAQHGYGKEAL------QLFKQMLKVGVPPNHI 516
Query: 422 LLSNMFAA 429
L ++ A
Sbjct: 517 TLVSVLCA 524
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 221/469 (47%), Gaps = 44/469 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I N+F FP + KA + V GKQ+H + + +G D FV S +Y+K G DA
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P+R++ +WNA S V A+ F ++ +G P+ + + +N C+
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
GR++HG+L++ G+D + N LVD Y K + A VFD I + VSW +++
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
V + ++ + G+ P F +SS L ACA +A ELGR +H+ +K +
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGS 245
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ F+G L+DMY KC S+ DA + F MPER+++ WNA+I G++ + A S F
Sbjct: 246 DSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF---P 302
Query: 306 SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M E + N TL VL + + A +I ++++LK G + ++D G+
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQI-HALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 365 GLVDRAYEIIKEMP----------------------------------MRPTISVWGALL 390
G V+ A + +E P ++P V +LL
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLL 421
Query: 391 NACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEA 436
NAC E G+ ++ K + +GN L NM+A G E+A
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNS--LVNMYAKCGSIEDA 468
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 42/276 (15%)
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G++ +F SVL AC L LG+ VH + V + + FV ++LV +Y KCG DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--TSMRCEAVPNYVTLVCVLSA 324
F+ +P+R++V WNA+ Y H A+S F +M + +R PN +L +++
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIR----PNEFSLSSMINV 120
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD---------------- 368
C+ +G KI + +K G A +VD+ + G+++
Sbjct: 121 CTGLEDSVQGRKI-HGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179
Query: 369 ---------------RAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAADNLF 410
RA E+++EM M P + + L AC ELGR +L
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 411 KLD-PNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
K+D +DS V L +M++ ++A LV K M +
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPE 275
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/586 (45%), Positives = 348/586 (59%), Gaps = 5/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I PN FTF + A + + G+Q+HAL K ++D FV + DMY+K G
Sbjct: 191 MRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGS 250
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +FDEMP RNL +WN+ I V AI F + G PD ++ + L+A
Sbjct: 251 MLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSA 308
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+Q+HG +V+ G G V V N LVD Y KC A +F G D++ V+W
Sbjct: 309 CAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTW 368
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M++ + E C F REGVEP + SS+ A A IA L G +H+ +K
Sbjct: 369 NVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLK 428
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N + S+LV MYGKCGS+ DA F + E N+VCW A+I + G A+ A+
Sbjct: 429 TGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKL 488
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + VP Y+T V VLSACS G ++ G K F SM + IKPG EHYAC+VDL
Sbjct: 489 FEEM--LNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDL 546
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G ++ A I+ MP P VWGALL AC + E+GR A+ LFKL+P++ GN+
Sbjct: 547 LGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNY 606
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++ G EEAD VR+ M G++K +GCSWI VKNR +F A D SH R EI
Sbjct: 607 MLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIY 666
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML KL+E +K GY+ +T FA VE E+ + + HSEK+ALAFGL+ +PPG P+RI
Sbjct: 667 GMLQKLKELIKRRGYVAETQFATNSVEGSEEQS-LWCHSEKLALAFGLLVLPPGSPVRIK 725
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR CGDCH+ KF S I RE+IVRD NRFHRF +G CSC DYW
Sbjct: 726 KNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 171/346 (49%), Gaps = 8/346 (2%)
Query: 54 MYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
+Y+K G +F+ P N+ TW I+ +P A+ F +R TG P+
Sbjct: 141 LYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNH 200
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
TF A L AC+ +LL G+Q+H + + F + V L+D Y KC + LA+ VFD
Sbjct: 201 FTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDE 260
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ +N VSW SM+V +V+N +F G P ISSVLSACA + L+ G
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFG 318
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ VH VK + G ++V ++LVDMY KCG +DA F +R++V WN +I G
Sbjct: 319 KQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRC 378
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ + A + F+ M +R P+ + + A + A+ +G I +S LK G +
Sbjct: 379 RNFEQACTYFQAM--IREGVEPDEASYSSLFHASASIAALTQGTMI-HSHVLKTGHVKNS 435
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ +V + G+ G + AY++ +E + W A++ +G
Sbjct: 436 RISSSLVTMYGKCGSMLDAYQVFRETK-EHNVVCWTAMITVFHQHG 480
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
PDL LN + L+ Q+H LV + +++ N L+ Y KC + ++
Sbjct: 98 PDLK---HLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154
Query: 169 FDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
F+ N V+W +++ ++ + F R G+ P F S++L ACA A
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L G+ +HA+ K C + FV +AL+DMY KCGS+ AE F++MP RNLV WN++I
Sbjct: 215 LLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIV 274
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
G+ A+ F E+ S+ P+ V++ VLSAC+ ++ G ++ S+ +K G
Sbjct: 275 GFVKNKLYGRAIGVFREVLSLG----PDQVSISSVLSACAGLVELDFGKQVHGSI-VKRG 329
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ +VD+ + GL + A ++ R ++ W ++ C
Sbjct: 330 LVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVT-WNVMIMGC 375
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 198 QMFLTARREGVEPKDFMISSV------LSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
Q+F T+ + GV PK SSV L+ A++ L+ +H+ V ++ +
Sbjct: 79 QLF-TSYQSGV-PKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANIN 136
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
L+ +Y KCGSI + FN P N+V W +I + AL+ F M +
Sbjct: 137 TLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRT--T 194
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN+ T +L AC+ A + +G +I +++ K+ ++D+ + G +
Sbjct: 195 GIYPNHFTFSAILPACAHAALLSEGQQI-HALIHKHCFLNDPFVATALLDMYAKCGSMLL 253
Query: 370 AYEIIKEMPMRPTISVWGALL 390
A + EMP R +S W +++
Sbjct: 254 AENVFDEMPHRNLVS-WNSMI 273
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/557 (44%), Positives = 347/557 (62%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+QLH+ +K D+FV DMYSK L +DA F+ +PE++L WNA IS
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 411
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
A+ F+ + + G + T L + + ++ + RQ+HG V+SGF ++ V
Sbjct: 412 WEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV 471
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+D YGKC+ V A+ +F+ + VS+ SM+ Y Q + E ++FL + ++
Sbjct: 472 NSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F+ SS+L+ACA ++ E G+ +H +K +IF G++LV+MY KCGSI DA A
Sbjct: 532 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 591
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+++ ER +V W+A+IGG A GH AL F +M ++ PN++TLV VL AC+ AG
Sbjct: 592 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM--LKEGVSPNHITLVSVLGACNHAG 649
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V + F SM +G KP EHYAC++DLLGRAG ++ A E++ +MP SVWGAL
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGAL 709
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L A R++ ELGR AA+ LF L+P SG HVLL+N++A+ G+WE VR+ M+D +K
Sbjct: 710 LGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVK 769
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G SWI VK++++ F D SH R+ EI A L +L + M AGY+P L+DVE+
Sbjct: 770 KEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQS 829
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK + HHSEK+A+AFGLIA P G PIR+ KNLR+C DCH+AFK+I IV RE+IVRD
Sbjct: 830 EKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDI 889
Query: 570 NRFHRFWDGYCSCSDYW 586
NRFH F DG CSC DYW
Sbjct: 890 NRFHHFKDGSCSCGDYW 906
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 215/446 (48%), Gaps = 40/446 (8%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN+F+ + A + L GK +H +K G D F + DMY+K G DA
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+++ + ++ +WNA I+ VL + A++
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL--------------------------- 346
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L Q+ RQLH L++ + ++ V GLVD Y KC+ + A++ F+ + +K+ ++W +++
Sbjct: 347 LGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 406
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q +E+ +F+ +EG+ +S++L + A + + + R VH ++VK+
Sbjct: 407 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 466
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+I+V ++L+D YGKC ++DAE F + +LV + ++I YA G + AL F EM
Sbjct: 467 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 526
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M E P+ +L+AC+ A E+G K + LKYG +V++ + G
Sbjct: 527 DM--ELKPDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCG 583
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLL 423
+D A E+ R +S W A++ +G GR A LF L S NH+ L
Sbjct: 584 SIDDAGRAFSELTERGIVS-WSAMIGGLAQHGH---GRQAL-QLFNQMLKEGVSPNHITL 638
Query: 424 SNMFAA---TGRWEEADLVRKEMKDV 446
++ A G EA L + M+++
Sbjct: 639 VSVLGACNHAGLVTEAKLYFESMEEL 664
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 216/479 (45%), Gaps = 73/479 (15%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N+FTF + KA S + GKQ+H + + SG DVFV + MY+K D+ ++F
Sbjct: 156 NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLF 215
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
DE+PERN+ +WNA S V A+ F + +G +P+ + + +NAC+
Sbjct: 216 DEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+ +HG+L++ G+D + N LVD Y K ++ A VF+ I + VSW +++ V
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ E ++ +R+ +H+ +K +E ++F
Sbjct: 336 LHEHHEQALELLGQMKRQ---------------------------LHSSLMKMDMESDLF 368
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V LVDMY KC ++DA +AFN +PE++L+ WNAII GY+ ALS F EM
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-- 426
Query: 309 CEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E + N TL +L + + V ++ + +++K G ++D G+ V
Sbjct: 427 -EGIGFNQTTLSTILKSTAGLQVVHVCRQV-HGLSVKSGFHSDIYVVNSLIDSYGKCSHV 484
Query: 368 DRAYEIIKE----------------------------------MPMRPTISVWGALLNAC 393
+ A I +E M ++P V +LLNAC
Sbjct: 485 EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 544
Query: 394 RVYGKPELGRIAADNLFK----LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
E G+ ++ K LD +GN L NM+A G ++A E+ + GI
Sbjct: 545 ANLSAFEQGKQLHVHILKYGFVLDIF-AGNS--LVNMYAKCGSIDDAGRAFSELTERGI 600
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P ++ L G Q+HA KSG D + ++YSK A K
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ DE E +L +W+A IS G A+ AF + G + + TF + L ACS
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L++G+Q+HG +V SGF+G+V V N LV Y KC+E +K +FD I ++N VSW ++
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YVQ +F G++P +F +SS+++AC + G+ +H +K + +
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
F +ALVDMY K G + DA F K+ + ++V WNA+I G H + AL +M
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 14/351 (3%)
Query: 98 AFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
A +NL G P +++ L+ C L+ G Q+H + +SG + S+ N L++ Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC G A+ + D + + VSW +++ Y QN F GV+ +F S
Sbjct: 102 SKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
SVL AC+ + L +G+ VH V V + EG++FV + LV MY KC D++ F+++PER
Sbjct: 162 SVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER 221
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
N+V WNA+ Y A+ F EM + PN +L +++AC+ +G K
Sbjct: 222 NVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK--PNEFSLSSMVNACTGLRDSSRG-K 278
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + +K G +VD+ + G + A + +++ +P I W A++ C ++
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Query: 397 GKPE--------LGRIAADNLFKLD-PNDSGNHVLLSNMFAATGRWEEADL 438
E + R +L K+D +D V L +M++ E+A +
Sbjct: 338 EHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 388
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 6/301 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E I N T + K+++ L + +Q+H L++KSG D++V S D Y K
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 483
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+++F+E +L ++ + I+ G+ + A+ F+ ++ +PD + LNA
Sbjct: 484 VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNA 543
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S + G+QLH +++ GF ++ N LV+ Y KC + A F + ++ VSW
Sbjct: 544 CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSW 603
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Q+ Q+F +EGV P + SVL AC AGL ++ +++
Sbjct: 604 SAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH-AGLVTEAKLYFESME 662
Query: 241 ACVEGNIFVG--SALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+ ++D+ G+ G I +A NKMP E N W A++G A + H D+
Sbjct: 663 ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG--AARIHKDVE 720
Query: 298 L 298
L
Sbjct: 721 L 721
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/586 (43%), Positives = 354/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E +SP+ FTFP + KA + + G ++H+L +K+G D FV S ++Y+K G
Sbjct: 99 MRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGF 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A K+FD++P++N A+W A IS V G+ + AID F L G PD + L+A
Sbjct: 159 IDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+ G + ++ +G NV V LVDFYGKC + A+ VFDG+++KN VSW
Sbjct: 219 CKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y N + +F EG++P + + VL +CAR+ LELG +
Sbjct: 279 SSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLING 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N +G+AL+DMY KCG + A F M +++ V WNA I G A GH AL
Sbjct: 339 NEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ T V +L AC+ AG VE+G + F SM + + P EHY C+VDL
Sbjct: 399 FGQME--KSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDL 456
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A+++IK MPM VWGALL CR++ +L + L L+P SGN+
Sbjct: 457 LGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNY 516
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++AA+ +WEEA +R M + G+KK G SWI V +H F DTSH + +I
Sbjct: 517 VLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIY 576
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L +++KAAGY+P T+ L+D+EEEEK +G HSEK+A+AFGLI+ P I +
Sbjct: 577 AKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVV 636
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K IS I GRE+IVRDNNRFH F DG CSC DYW
Sbjct: 637 KNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 183/370 (49%), Gaps = 8/370 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K +HA L+ G D ++ G + + ++ D+ E N+ +N I VL
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
+ +I+ + ++R+ G PD TF L AC+ +LG ++H +V++G + + V
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L++ Y KC + A VFD I DKN SW + + YV + MF G+
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F + VLSAC R L G + + + N+FV +ALVD YGKCG+++ A
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ M E+N+V W+++I GYA G AL F +M + + P+ +V VL +C+R G
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK--PDCYAMVGVLCSCARLG 324
Query: 330 AVEKGMKIFYSMTLKYG--IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+E G ++ L G + ++D+ + G +DRA+E+ + M + + VW
Sbjct: 325 ALELGD---WASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRV-VWN 380
Query: 388 ALLNACRVYG 397
A ++ + G
Sbjct: 381 AAISGLAMSG 390
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
S L+ + +H L+R G D + + N ++ F + + D + N + +M+
Sbjct: 21 SCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
V N + +++ + R+EG+ P F VL ACAR+ ELG +H++ VKA E
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FV +L+++Y KCG I +A F+ +P++N W A I GY G A+ F +
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M P+ +LV VLSAC R G + G I +T + G+ +VD G+
Sbjct: 201 LEMGLR--PDSFSLVEVLSACKRTGDLRSGEWIDEYIT-ENGMVRNVFVATALVDFYGKC 257
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
G ++RA + M + +S W +++ Y L + A D FK+
Sbjct: 258 GNMERARSVFDGMLEKNIVS-WSSMIQG---YASNGLPKEALDLFFKM 301
>gi|255552163|ref|XP_002517126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543761|gb|EEF45289.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 463
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/341 (68%), Positives = 280/341 (82%), Gaps = 3/341 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ I PNDFTFPC FKAS++L +P GKQ+HA+A+K GQI+DVFVGCSAFDMYSKTGL
Sbjct: 99 MRRDNIQPNDFTFPCAFKASASLLLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYSKTGL 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
K DA K+FDE+PERN+ TWNAYISNAVL GR +NA AF+ LRR G EPD TFC F NA
Sbjct: 159 KQDAQKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D + LGRQLHGF++RSGF+ +VSV NGL+DFYGKC EV LA++VF + ++N VSW
Sbjct: 219 CADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVRLAEMVFGKMENRNAVSW 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
CSM+ QN EEE C F+ R+EG+EP D+M+SSV+SACA +AGLELGRS HA+AVK
Sbjct: 279 CSMVAACEQNGEEEKACLFFVEGRKEGIEPTDYMVSSVISACAGLAGLELGRSFHALAVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
AC+EG+IFVGSALVDMYGKCG I+D+E AF++M ERNLV WNA+IGGYAHQGHA+MA+
Sbjct: 339 ACLEGDIFVGSALVDMYGKCGGIEDSEQAFHEMSERNLVTWNALIGGYAHQGHAEMAVRL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
F+EMT+ E VPNYVTLVCVLSAC R GAVE GM+IF SM
Sbjct: 399 FKEMTT---EVVPNYVTLVCVLSACGRGGAVELGMEIFGSM 436
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 205/443 (46%), Gaps = 12/443 (2%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ HA +K+ Q F+ MYSK L + A + P R++ TW + IS +V
Sbjct: 25 GRATHARIIKTFQSPLPPFLSNHLISMYSKLDLPNSAQLVLHLTPTRSVVTWTSLISGSV 84
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITF-CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G A+ F N+RR +P+ TF CAF A + L +G+Q+H V+ G +V
Sbjct: 85 QNGHFSFALYHFFNMRRDNIQPNDFTFPCAF-KASASLLLPFVGKQIHAIAVKFGQINDV 143
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V D Y K A+ +FD + ++N V+W + + V +N F+ RR
Sbjct: 144 FVGCSAFDMYSKTGLKQDAQKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRA 203
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G EP +ACA ++LGR +H +++ E ++ V + L+D YGKC ++ A
Sbjct: 204 GCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVRLA 263
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E+ F KM RN V W +++ G + A F E E P + V+SAC+
Sbjct: 264 EMVFGKMENRNAVSWCSMVAACEQNGEEEKACLFFVEGRKEGIE--PTDYMVSSVISACA 321
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+E G + F+++ +K ++ + +VD+ G+ G ++ + + EM R ++ W
Sbjct: 322 GLAGLELG-RSFHALAVKACLEGDIFVGSALVDMYGKCGGIEDSEQAFHEMSERNLVT-W 379
Query: 387 GALLNACRVYGKPELGRIAADNLFK-LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
AL+ G E+ A LFK + N+V L + +A GR +L +
Sbjct: 380 NALIGGYAHQGHAEM----AVRLFKEMTTEVVPNYVTLVCVLSACGRGGAVELGMEIFGS 435
Query: 446 VGIKKGAGCSWISVKNRIHIFQA 468
+ ++ VK+++ I A
Sbjct: 436 MRDRRTLSQRNTKVKDKLTILYA 458
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/586 (41%), Positives = 354/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FT K+ L GK +H ALK HD+FVG + ++Y+K+G
Sbjct: 228 MRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGE 287
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+EMP+ +L W+ I+ R K A+D F+ +R+T P+ TF + L A
Sbjct: 288 IIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQA 347
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L LG+Q+H +++ G + NV V N ++D Y KC E+ + +F+ + D+NDV+W
Sbjct: 348 CASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTW 407
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V YVQ + E +F ++P + SSVL A A +A LE G +H++ +K
Sbjct: 408 NTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIK 467
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+DMY KCG I DA + F+KM +R+ V WNA+I GY+ G + AL+
Sbjct: 468 TMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNL 527
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M C+ PN +T V VLSACS AG + KG F SM+ Y IKP EHY C+V L
Sbjct: 528 FDMMQHTDCK--PNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWL 585
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G D A ++I E+ +P++ VW ALL AC ++ K +LGR+ A ++ +++P+D H
Sbjct: 586 LGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATH 645
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+A GRW+ VRK M+ ++K G SW+ + +H F DTSH I
Sbjct: 646 VLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLIC 705
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L ++ + AGY+PD N L DV+++EK + HSE++ALA+GLI P IRI
Sbjct: 706 AMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRII 765
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+ K IS +V RE+++RD NRFH F G CSC DYW
Sbjct: 766 KNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 200/404 (49%), Gaps = 8/404 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F F L K ++ + LHA K G D FVG + D YS G D A +F
Sbjct: 135 NPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVF 194
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D++ +++ +W ++ + ++ F +R G +P+ T L +C
Sbjct: 195 DDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFN 254
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
+G+ +HG ++ +D ++ V L++ Y K E+ A+ +F+ + + + W M+ Y
Sbjct: 255 VGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYA 314
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q+ + +FL R+ V P +F +SVL ACA L+LG+ +H+ +K + N+F
Sbjct: 315 QSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVF 374
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +A++D+Y KCG I+++ F ++P+RN V WN II GY G + A++ F M +
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHM--LE 432
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
+ P VT VL A + A+E G++I +S+T+K ++D+ + G ++
Sbjct: 433 HDMQPTEVTYSSVLRASASLAALEPGLQI-HSLTIKTMYNKDTVVANSLIDMYAKCGRIN 491
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
A +M R +S W A++ ++G + A NLF +
Sbjct: 492 DARLTFDKMNKRDEVS-WNAMICGYSMHGMS----MEALNLFDM 530
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 4/365 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P+ GK LH LK G D+F + Y ++ DA K+FDEMP+ N ++
Sbjct: 51 PIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQG 110
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ A+ + + + G E + F L L L LH + + G +
Sbjct: 111 YSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHAD 170
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V L+D Y V +A+ VFD I K+ VSW M+ Y +N E Q+F R
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P +F IS L +C + +G+SVH A+K C + ++FVG AL+++Y K G I D
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A+ F +MP+ +L+ W+ +I YA + AL F M + VPN T VL AC
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMR--QTSVVPNNFTFASVLQAC 348
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ + +++ G +I +S LK+G+ ++D+ + G ++ + ++ +E+P R ++
Sbjct: 349 ASSVSLDLGKQI-HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT- 406
Query: 386 WGALL 390
W ++
Sbjct: 407 WNTII 411
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/586 (43%), Positives = 356/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E PN+FTFP + KA + L G ++H L +K G DVFV S +Y+K G
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY 162
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+FD++P++N+ +W A IS + G+ + AID F L PD T L+A
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G +H ++ G NV V LVD Y KC + A+ VFDG+ +K+ VSW
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N + +FL +RE V+P + + VLSACAR+ LELG V + +
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDR 342
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N +G+AL+D+Y KCGS+ A F M E++ V WNAII G A G+ ++
Sbjct: 343 NEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGL 402
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F ++ + + P+ T + +L C+ AG V++G + F SM + + P EHY C+VDL
Sbjct: 403 FGQVEKLGIK--PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 460
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAGL+D A+++I+ MPM VWGALL ACR++ +L +A L +L+P +SGN+
Sbjct: 461 LGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNY 520
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN+++A +W+EA VR M + I+K GCSWI V +H F D H + +I
Sbjct: 521 VLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIY 580
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L ++MK AGY+P T+F L+D+EEEEK +G HSEK+A+AFGLI+ P IR+
Sbjct: 581 AKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVV 640
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K IS I GRE+ VRDNNRFH F +G CSC+DYW
Sbjct: 641 KNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 179/353 (50%), Gaps = 4/353 (1%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F ++ + N+ WN I V +AI+ + +R G P+ TF L AC+
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
LQLG ++H +V+ GFD +V V LV Y KC + A VFD I DKN VSW +++
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y+ + MF + P F I VLSAC ++ L G +H ++ + N
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+FVG++LVDMY KCG+++ A F+ MPE+++V W A+I GYA G A+ F +M
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQ- 306
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R P+ T+V VLSAC+R GA+E G + + + ++DL + G
Sbjct: 307 -RENVKPDCYTVVGVLSACARLGALELGEWV-SGLVDRNEFLYNPVLGTALIDLYAKCGS 364
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+ RA+E+ K M + + VW A+++ + G ++ + KL GN
Sbjct: 365 MSRAWEVFKGMKEKDRV-VWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGN 416
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/589 (42%), Positives = 357/589 (60%), Gaps = 33/589 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLA----------- 77
G Q+H +K G VFVG DMYSKTGL A + FDEMPE+N+
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220
Query: 78 --------------------TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
+W A I+ G + AID F +R E D TF +
Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC LQ G+Q+H +++R+ + N+ V + LVD Y KC + A+ VF + KN
Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV 340
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +MLV Y QN E ++F + G+EP DF + SV+S+CA +A LE G H
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 400
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+ + + I V +ALV +YGKCGSI+D+ F++M + V W A++ GYA G A+
Sbjct: 401 ALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANET 460
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L FE M + + P+ VT + VLSACSRAG V+KG +IF SM ++ I P +HY C+
Sbjct: 461 LRLFESMLAHGFK--PDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCM 518
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DL RAG ++ A + I +MP P W +LL++CR + E+G+ AA++L KL+P+++
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNT 578
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+++LLS+++AA G+WEE +RK M+D G++K GCSWI KN++HIF A D S+ +
Sbjct: 579 ASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSD 638
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I + L KL +M GY+PD N L+DV++ EK+ + HHSEK+A+AFGLI IPPG+PI
Sbjct: 639 QIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPI 698
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+CGDCH+A K+IS I RE++VRD RFH F DG CSC D+W
Sbjct: 699 RVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 182/377 (48%), Gaps = 38/377 (10%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL--I 112
YSK + +++F MP R++ +WN+ IS G ++ A+ NL G +L I
Sbjct: 85 YSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY-NLMLYNGPFNLNRI 143
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
L S + LG Q+HG +V+ GF V V + LVD Y K V A+ FD +
Sbjct: 144 ALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEM 203
Query: 173 IDKN-------------------------------DVSWCSMLVVYVQNYEEENGCQMFL 201
+KN +SW +M+ + QN + +F
Sbjct: 204 PEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFR 263
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
R E +E + SVL+AC + L+ G+ VHA ++ + NIFVGSALVDMY KC
Sbjct: 264 EMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCK 323
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
SI+ AE F KM +N+V W A++ GY G+++ A+ F +M + E P+ TL V
Sbjct: 324 SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIE--PDDFTLGSV 381
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S+C+ ++E+G + F+ L G+ +V L G+ G ++ ++ + EM
Sbjct: 382 ISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVD 440
Query: 382 TISVWGALLNACRVYGK 398
+S W AL++ +GK
Sbjct: 441 EVS-WTALVSGYAQFGK 456
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 163/344 (47%), Gaps = 11/344 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + + +TF + A + GKQ+HA +++ ++FVG + DMY K
Sbjct: 265 MRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKS 324
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F +M +N+ +W A + G + A+ F +++ G EPD T + +++
Sbjct: 325 IKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISS 384
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG ++V N LV YGKC + + +F + ++VSW
Sbjct: 385 CANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y Q + ++F + G +P VLSAC+R ++ G + +K
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504
Query: 241 A----CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+E + + ++D++ + G +++A NKMP + + W +++ + +
Sbjct: 505 EHRIIPIEDHY---TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + E + + +Y+ L + +A + + KGM+
Sbjct: 562 IGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMR 605
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 16/238 (6%)
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P+ F++++++SA A+ + R V + N++ + L+ Y K + + E
Sbjct: 42 PEIFLLNNLVSAYAKFDRITYARRV----FDQMPQRNLYSWNTLLSSYSKLACLPEMERV 97
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ MP R++V WN++I YA +G ++ ++ M N + L +L S+ G
Sbjct: 98 FHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML-YNGPFNLNRIALSTMLILASKQG 156
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI---SVW 386
V G+++ + +K+G + + +VD+ + GLV A + EMP + + ++
Sbjct: 157 CVHLGLQV-HGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLI 215
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
L+ R+ +L + + DS + + F G EA + +EM+
Sbjct: 216 AGLMRCSRIEDSRQL-------FYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMR 266
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/617 (40%), Positives = 360/617 (58%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ ++ N TF + S G+Q++ LK G DVFVG DMY+K GL
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 61 KDDADKMFDEMPERNLA-------------------------------TWNAYISNAVLG 89
DA + FDEMPERN+ +W I+ +
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G + A+D F +R G D TF + L AC L G+Q+H +++R+ NV V
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y KC + A+ VF + KN +SW +MLV Y QN E ++F +R GVE
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P DF + SV+S+CA +A LE G H A+ + + I V +AL+ +YGKCGS +++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +M R+ V W A++ GYA G A+ + FE M + + P+ VT + VLSACSRAG
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLK--PDGVTFIGVLSACSRAG 486
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VEKG++ F SM ++GI P +H C++DLLGRAG ++ A I MP P + W L
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CRV+G E+G+ AAD+L L+P + ++VLLS+++A+ G+W++ +R+ M+D ++
Sbjct: 547 LSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVR 606
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G SWI K ++H+F A D S +I A L KL +M GY+PD + L+DVEE
Sbjct: 607 KEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEES 666
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK+ + HHSEK+A+AFGLI +PPG+PIR+ KNLR+CGDCH+A KFIS I RE++VRD
Sbjct: 667 EKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDA 726
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F DG CSC D+W
Sbjct: 727 VRFHLFKDGTCSCGDFW 743
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 145/365 (39%), Gaps = 70/365 (19%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ + L C + ++LH ++++ + N L+ Y K + A VFD I
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVE----------------------- 209
N SW ++L VY + Q+F L R+GV
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 210 -PKD-------FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
KD S++L C++ ++LGR ++ +K ++FVGS LVDMY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 262 SIQDAEIAFNKMPERNLV-------------------------------CWNAIIGGYAH 290
I DA+ F++MPERN+V W +I G
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G AL F EM + A+ + T VL+AC A+ +G +I ++ ++ K
Sbjct: 248 NGLEREALDMFREM-RLAGFAMDQF-TFGSVLTACGSLLALGEGKQI-HAYVIRTDHKDN 304
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+ +VD+ + + A + K MP + IS W A+L YG+ A F
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVIS-WTAMLVG---YGQNGFSEEAVKIFF 360
Query: 411 KLDPN 415
++ N
Sbjct: 361 EMQRN 365
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/586 (41%), Positives = 356/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ PN FT KA +A+ G+QLH+ +K D+F DMYSK +
Sbjct: 275 MKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM 334
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA + +D MP++++ WNA IS G +A+ F + + + T L +
Sbjct: 335 MDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKS 394
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +++ +Q+H ++SG + V N L+D YGKCN + A +F+ ++ V++
Sbjct: 395 VASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAY 454
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y Q + E +++L + ++P F+ SS+L+ACA ++ E G+ +H A+K
Sbjct: 455 TSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK 514
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+IF ++LV+MY KCGSI+DA+ AF+++P R +V W+A+IGGYA GH AL
Sbjct: 515 FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRL 574
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M +R PN++TLV VL AC+ AG V +G + F M + +GIKP EHYAC++DL
Sbjct: 575 FNQM--LRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDL 632
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G ++ A E++ +P VWGALL A R++ ELG+ AA LF L+P SG H
Sbjct: 633 LGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTH 692
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+ G WE VRK MKD +KK G SWI +K++++ F D SH R+ EI
Sbjct: 693 VLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIY 752
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L + + AGY +++V++ EK + HHSEK+A+AFGLIA PPG PIR+
Sbjct: 753 AKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVK 812
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+ FKF+ IV RE+IVRD NRFH F DG CSC DYW
Sbjct: 813 KNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 200/392 (51%), Gaps = 4/392 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N+FTFP + KA S G+++H +A+ +G D FV + MY+K GL DD+ ++F
Sbjct: 81 NEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLF 140
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ ERN+ +WNA S V A+ F + R+G P+ + LNAC+
Sbjct: 141 GGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGD 200
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LGR++HG +++ G D + N LVD Y K E+ A VF I + VSW +++ V
Sbjct: 201 LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCV 260
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ + + + G P F +SS L ACA + ELGR +H+ +K ++F
Sbjct: 261 LHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLF 320
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
LVDMY KC + DA A++ MP+++++ WNA+I GY+ G A+S F +M S
Sbjct: 321 AAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED 380
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
+ N TL VL + + A+ K K +++++K GI ++D G+ +D
Sbjct: 381 IDF--NQTTLSTVLKSVASLQAI-KVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHID 437
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
A +I +E ++ + +++ A YG E
Sbjct: 438 EASKIFEERTWEDLVA-YTSMITAYSQYGDGE 468
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 196/397 (49%), Gaps = 4/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I PN+F+ + A + L G+++H L LK G D F + DMYSK G
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGE 233
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F ++ ++ +WNA I+ VL A+ ++ +G P++ T + L A
Sbjct: 234 IEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKA 293
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +LGRQLH L++ ++ GLVD Y KC + A+ +D + K+ ++W
Sbjct: 294 CAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAW 353
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y Q + + +F E ++ +S+VL + A + +++ + +H +++K
Sbjct: 354 NALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIK 413
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + +V ++L+D YGKC I +A F + +LV + ++I Y+ G + AL
Sbjct: 414 SGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKL 473
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ +M + P+ +L+AC+ A E+G K + +K+G +V++
Sbjct: 474 YLQMQD--ADIKPDPFICSSLLNACANLSAYEQG-KQLHVHAIKFGFMCDIFASNSLVNM 530
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G ++ A E+P R +S W A++ +G
Sbjct: 531 YAKCGSIEDADRAFSEIPNRGIVS-WSAMIGGYAQHG 566
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 219/459 (47%), Gaps = 22/459 (4%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+LHA +K G D + +YSK A K+ DE E ++ +W++ +S V G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A+ F + G + + TF + L ACS L +GR++HG V +GF+ + V N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
LV Y KC + ++ +F GI+++N VSW ++ YVQ+ +F R G+ P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+F IS +L+ACA + +LGR +H + +K ++ + F +ALVDMY K G I+ A F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ ++V WNAII G D+AL +EM PN TL L AC+ G
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR--PNMFTLSSALKACAAMGF 299
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACV--VDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
E G ++ S+ + ++ +A V VD+ + ++D A MP + I+ W A
Sbjct: 300 KELGRQLHSSLI---KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-WNA 355
Query: 389 LLNACRVYGKPELGRIAADNLF-KLDPND-SGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
L++ G + A +LF K+ D N LS + + +A V K++ +
Sbjct: 356 LISGYSQCGD----HLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL-QAIKVCKQIHTI 410
Query: 447 GIKKGAGCSWISVKNRI-------HIFQAKDTSHERNTE 478
IK G + + + + HI +A ER E
Sbjct: 411 SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/598 (41%), Positives = 364/598 (60%), Gaps = 14/598 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + PN TFPC K+ S+L+ GKQ+H A G D+FV + DMYSK G
Sbjct: 77 MRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGY 136
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI---DAFINLRRTGGEP-------- 109
+DA K+FDE+PERN+ +W + IS V R + A+ F+ + T +
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGV 196
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D + ++AC+ + + +HG V+ GF+G ++V N L+D Y KC E+ +++ VF
Sbjct: 197 DSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVF 256
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGL 228
DG+ + + SW S++ VY QN +F + G V +S+VL ACA L
Sbjct: 257 DGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGAL 316
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
++G+ +H VK +E N+ VG+++VDMY KCG ++ A AF+++ +N+ W ++ GY
Sbjct: 317 QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY 376
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
GH A+ F EM +RC PNY+T V VL+ACS AG +++G F M ++ ++
Sbjct: 377 GMHGHGKEAMKVFYEM--IRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVE 434
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
PG EHY+C+VDLLGRAG + AY +I+EM ++P VWG+LL ACR++ ELG I+A
Sbjct: 435 PGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARK 494
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
LFKLDP++ G +VLLSN++A GRW++ + +R MK+ G+ K G S + K R+H+F
Sbjct: 495 LFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLV 554
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGL 528
D H ++ +I L +L +++ GY+P+ LYDV+ EEK + HSEK+A+AFG+
Sbjct: 555 GDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGI 614
Query: 529 IAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ PG I+I KNLRICGDCH A K IS IV RE+++RD+ RFH F DG CSC DYW
Sbjct: 615 MNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 170/345 (49%), Gaps = 19/345 (5%)
Query: 67 MFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
MF + ++ ++ +WN+ I++ G A+ AF ++R+ P+ TF + +CS
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+Q+H G+ ++ V + L+D Y KC + A+ +FD I ++N VSW SM+
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDF-------------MISSVLSACARIAGLELGR 232
YVQN +FL V+ D+ ++ V+SACAR+ +
Sbjct: 161 GYVQNERAREA--VFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH +AVK EG + VG+ L+D Y KCG I + F+ M E ++ WN++I YA G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ A S F +M R E N VTL VL AC+ +GA++ G K + +K ++
Sbjct: 279 LSVEAFSLFSDMVK-RGEVRYNAVTLSAVLLACAHSGALQIG-KCIHDQVVKMELEDNLV 336
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+VD+ + G V+ A + + R + W ++ ++G
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHG 380
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/617 (40%), Positives = 364/617 (58%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ ++ N TF + S+ G+Q+H +K G VFVG S DMY+K GL
Sbjct: 129 MKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGL 188
Query: 61 KDDADKMFDEMPERNLA-------------------------------TWNAYISNAVLG 89
A ++FDE+ ERN+ +W I+ +
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G A+D F ++R+ G D TF + L AC L+ G+++H ++RSG++ NV V
Sbjct: 249 GLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG 308
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y KC V A+ VF + +KN VSW +MLV Y QN E ++F +R G+E
Sbjct: 309 SALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE 368
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P DF + SV+S+CA +A LE G H A+ + + I V +AL+ +YGKCGSI+D+
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQL 428
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M R+ V W A++ GYA G A+ + FE M + P+ VT + VLSACSRAG
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLK--PDAVTFIAVLSACSRAG 486
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G + F SM +GI P ++HY C++DL GRAG ++ A I +MP P W L
Sbjct: 487 LVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATL 546
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CR+YG E+G+ AA++L +LDP + ++LLS+++AA G+W +R+ M++ G +
Sbjct: 547 LSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGAR 606
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G SWI K++++IF A D S + +I A L KL +M GY+PD + L+DVE+
Sbjct: 607 KEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDS 666
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EKM + HHSEK+A+AFGL+ IP G+PIR+ KNLR+CGDCH+A K+IS I RE++VRD
Sbjct: 667 EKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDA 726
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F DG CSC D+W
Sbjct: 727 VRFHLFKDGTCSCGDFW 743
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 36/376 (9%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLIT 113
YSK+G ++F MP R+ +WN+ IS V G A+ + ++ + G + IT
Sbjct: 81 YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRIT 140
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--- 170
F L S + LGRQ+HG +V+ GF V V + LVD Y K V +A VFD
Sbjct: 141 FSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQ 200
Query: 171 ----------------------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G+ +++ +SW +M+ +QN E +F
Sbjct: 201 ERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRD 260
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R+EG+ + SVL+AC + L+ G+ +H + +++ N+FVGSALVDMY KC S
Sbjct: 261 MRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRS 320
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
++ AE F +M +N+V W A++ GY G ++ A+ F +M E P+ TL V+
Sbjct: 321 VRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE--PDDFTLGSVI 378
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
S+C+ ++E+G + F+ L G+ ++ L G+ G ++ + ++ EM R
Sbjct: 379 SSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDE 437
Query: 383 ISVWGALLNACRVYGK 398
+S W AL++ +GK
Sbjct: 438 VS-WTALVSGYAQFGK 452
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 63/322 (19%)
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++LH +++S + + N L++ Y K + A+ VFD + N SW +ML Y +
Sbjct: 24 AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83
Query: 190 NYEEENGCQMF-LTARREGVEPKDFM-------------------------------ISS 217
+ + ++F + R+GV + S+
Sbjct: 84 SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L + ++LGR +H VK +FVGS+LVDMY K G + A F+++ ERN
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTS----------------------------MRC 309
+V +N +I G G + F M MR
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263
Query: 310 EAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E + + T VL+AC A+++G +I +++ ++ G + +VD+ + V
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEI-HTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322
Query: 369 RAYEIIKEMPMRPTISVWGALL 390
A + K M + +S W A+L
Sbjct: 323 YAEAVFKRMANKNVVS-WTAML 343
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 39/196 (19%)
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C + +H + +K+ F+ + L++ Y K G+I A F+KMP+ N W
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMR---------------------CEAVPNY----- 315
N ++ Y+ G LS+ +E+ S+ EAV Y
Sbjct: 75 NTMLSAYSKSGD----LSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130
Query: 316 --------VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+T +L S G V+ G +I + +K+G + +VD+ + GLV
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGCVDLGRQI-HGQIVKFGFGAYVFVGSSLVDMYAKMGLV 189
Query: 368 DRAYEIIKEMPMRPTI 383
A ++ E+ R +
Sbjct: 190 SVASQVFDEVQERNVV 205
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/586 (42%), Positives = 351/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FTF + KA L + GK +H A K+ + ++FVG D+Y K+G
Sbjct: 237 MRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGD 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA ++F+EMP+ ++ W+ I+ + + AI+ F +RR P+ T + L A
Sbjct: 297 VDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQA 356
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQLG Q+H +V+ G D NV V N L+D Y KC + + +F + DVSW
Sbjct: 357 CASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSW 416
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V YVQ E +F V+ + SSVL ACA IA LE G +H+++VK
Sbjct: 417 NTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVK 476
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N VG+AL+DMY KCG+I+DA + F+ + E + V WNA+I GY+ G AL +
Sbjct: 477 TIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKT 536
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M C+ P+ VT V +LSACS AG +++G F SM +Y I+P AEHY C+V L
Sbjct: 537 FESMLETECK--PDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWL 594
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G +D+A +++ E+P P++ VW ALL+AC ++ ELGRI+A + +++P D H
Sbjct: 595 LGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATH 654
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A RW +R MK GI+K G SWI + R+H F DTSH I
Sbjct: 655 VLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLIN 714
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML L + + GY+PD + L DVE+ +K + HSE++ALA+GLI P P+RI
Sbjct: 715 GMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRII 774
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+A K IS IV R++I+RD NRFH F +G CSC DYW
Sbjct: 775 KNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 193/389 (49%), Gaps = 4/389 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F F + K + G +HA K G D FVG + D YS G + A ++F
Sbjct: 144 NPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D + +++ +W ++ V + ++ F +R G +P+ TF + L AC +
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
+G+ +HG ++ + + V L+D Y K +V A VF+ + + + W M+ Y
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q+ + E +MF RR V P F ++S+L ACA + L+LG +H VK ++ N+F
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +AL+DMY KCG ++++ F++ P V WN +I GY G+ + AL F++M +
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDM--LE 441
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
C+ VT VL AC+ A+E G +I +S+++K ++D+ + G +
Sbjct: 442 CQVQGTEVTYSSVLRACAGIAALEPGSQI-HSLSVKTIYDKNTVVGNALIDMYAKCGNIK 500
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYG 397
A + + +S W A+++ V+G
Sbjct: 501 DARLVFDMLREHDQVS-WNAMISGYSVHG 528
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 186/404 (46%), Gaps = 10/404 (2%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
TGK LH +K G D+F + Y K DA K+FDEMP+RN ++ I
Sbjct: 62 TGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYS 121
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
R AI F L+ G E + F L +LG +H + + GFD +
Sbjct: 122 QCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+D Y C A+ VFD I K+ VSW M+ YV+N E ++F R G
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P +F +SVL AC + +G++VH A K +FVG L+D+Y K G + DA
Sbjct: 242 FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +MP+ +++ W+ +I YA ++ A+ F M R +PN TL +L AC+
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR--RGLVLPNQFTLASLLQACAS 359
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
++ G +I + +K G+ ++D+ + G ++ + ++ E P +S W
Sbjct: 360 LVDLQLGNQI-HCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVS-WN 417
Query: 388 ALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAA 429
++ G E I LFK L+ G V S++ A
Sbjct: 418 TVIVGYVQAGNGEKALI----LFKDMLECQVQGTEVTYSSVLRA 457
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 25/298 (8%)
Query: 98 AFINLRRTGGEPDLITFC--AFLNAC---SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
+F+ R + P+ T+ + L +C DC+ G+ LH +++ G ++ N L
Sbjct: 29 SFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCAT---GKYLHCEIIKKGNCLDLFANNIL 85
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
++FY K + + A +FD + D+N VS+ +++ Y Q +F + EG E
Sbjct: 86 LNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP 145
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
F+ S+VL +LG SVHA K + + FVG+AL+D Y CG + A F+
Sbjct: 146 FVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDA 205
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +++V W ++ Y + +L F M + + PN T VL AC
Sbjct: 206 IEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFK--PNNFTFASVLKACVGLEVFN 263
Query: 333 KG-------MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
G K Y L G++ ++DL ++G VD A ++ +EMP I
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVE--------LIDLYIKSGDVDDALQVFEEMPKDDVI 313
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/652 (38%), Positives = 363/652 (55%), Gaps = 78/652 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ P LFK + L GKQ+H ++ SG D FV S F MY + G DA K+
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 68 FDEMPER-----------------------------------NLATWNAYISNAVLGGRP 92
FD M ++ N+ +WN +S G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
K A+ F + G PD +T + L + D +L +GR +HG++++ G + V + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 153 VDFYGKCNEV-----------------------GLAKVVFDGIIDK-------------- 175
+D YGK V GL++ +G++DK
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR---NGLVDKALEMFELFKEQTME 350
Query: 176 -NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N VSW S++ QN ++ ++F + GV+P I S+L AC IA L GRS
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H AV+ + N+ VGSAL+DMY KCG I ++I FN MP +NLVCWN+++ G++ G A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+S FE + MR P++++ +LSAC + G ++G K F M+ +YGIKP EHY
Sbjct: 471 KEVMSIFESL--MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
+C+V+LLGRAG + AY++IKEMP P VWGALLN+CR+ +L IAA+ LF L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+ G +VLLSN++AA G W E D +R +M+ +G+KK GCSWI VKNR++ A D SH
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ +I + ++ +EM+ +G+ P+ +FAL+DVEE+E+ + HSEK+A+ FGL+ P G
Sbjct: 649 QIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDG 708
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P+++ KNLRICGDCH+ KFIS GRE+ +RD NRFH F DG CSC D+W
Sbjct: 709 TPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 172/441 (39%), Gaps = 76/441 (17%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q HA LKSG +D ++ YS +DAD + +P+ + ++++ I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+I F + G PD C++ S ++G+Q+H SG D + V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML------------VVYVQNYEEENGCQ 198
+ Y +C +G A+ VFD + DK DV CS L VV + + E +G +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDK-DVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 199 ------------------------MFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
MF G P +SSVL + L +GR +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-------------------- 274
H +K + + V SA++DMYGK G + FN+
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 275 ---------------ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
E N+V W +II G A G AL F EM + PN+VT+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNHVTIP 392
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+L AC A+ G + + ++ + + ++D+ + G ++ + + MP
Sbjct: 393 SMLPACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 380 RPTISVWGALLNACRVYGKPE 400
+ + W +L+N ++GK +
Sbjct: 452 K-NLVCWNSLMNGFSMHGKAK 471
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 149/371 (40%), Gaps = 78/371 (21%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q H +++SG + + L+ Y N A +V I D S+ S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+F G+ P ++ ++ CA ++ ++G+ +H V+ + ++ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
++ MY +CG + DA F++M ++++V +A++ YA +G + + EM S EA
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYS------------------------------M 341
N V+ +LS +R+G ++ + +F +
Sbjct: 216 --NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 342 TLKYGIKPGAEHYACV----VDLLGRA-------------------------------GL 366
Y IK G CV +D+ G++ GL
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 367 VDRA---YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG---NH 420
VD+A +E+ KE M + W +++ C GK I A LF+ + +G NH
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD----IEALELFR-EMQVAGVKPNH 388
Query: 421 VLLSNMFAATG 431
V + +M A G
Sbjct: 389 VTIPSMLPACG 399
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN T P + A + G+ H A++ + +V VG + DMY+K G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + +F+ MP +NL WN+ ++ + G+ K + F +L RT +PD I+F + L+A
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 121 CSDCSLLQLG 130
C L G
Sbjct: 499 CGQVGLTDEG 508
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/612 (41%), Positives = 357/612 (58%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A+SAL GKQ H L+ G + FVG DMY+K L DA
Sbjct: 136 VRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAK 195
Query: 66 KMFDE-------------------------------MPERNLATWNAYISNAVLGGRPKN 94
+ FDE M +R+ TW ++ G
Sbjct: 196 RAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESE 255
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F +R G D TF + L AC S L+ G+Q+H +++R+ +D NV V + LVD
Sbjct: 256 ALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVD 315
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + LA+ VF + KN +SW +++V Y QN E ++F +R+G++P D+
Sbjct: 316 MYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYT 375
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ SV+S+CA +A LE G H +A+ + + I V +ALV +YGKCGSI+DA F++M
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS 435
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ V W A++ GYA G A + FE+M + + P+ VT + VLSACSRAG VEKG
Sbjct: 436 FHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVK--PDGVTFIGVLSACSRAGFVEKG 493
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F+SM +GI P +HY C++DL R+G + A E IK+MPM P WG LL+ACR
Sbjct: 494 RSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACR 553
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G E+G+ AA+NL ++DP + ++VLL +M AA G+W E +R+ M+D +KK GC
Sbjct: 554 LRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGC 613
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI KN++HIF A D SH + I L L +M GY PD + L+DV + +K+
Sbjct: 614 SWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHM 673
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
V HHSEK+A+AFGLI +P +PIRI KNLR+C DCH+A KFIS I GR+++VRD RFH+
Sbjct: 674 VSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 733
Query: 575 FWDGYCSCSDYW 586
F DG CSC D+W
Sbjct: 734 FSDGVCSCGDFW 745
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 190/414 (45%), Gaps = 76/414 (18%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYIS--------------------------NAVL 88
Y K G A ++FD MP NL T+NA +S NAV+
Sbjct: 51 YGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVI 110
Query: 89 -----GGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
GG A+ ++ L + P IT + A S LG+Q H ++R G
Sbjct: 111 AGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLG 170
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----------------------------- 172
F N V + LVD Y K + VG AK FD +
Sbjct: 171 FGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFE 230
Query: 173 --IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
D++ ++W +M+ + QN E ++F R +G+ + S+L+AC ++ LE
Sbjct: 231 VMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQ 290
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+ +HA ++ + N+FVGSALVDMY KC SI+ AE F +M +N++ W A+I GY
Sbjct: 291 GKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQ 350
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G ++ A+ F EM R P+ TL V+S+C+ ++E+G + F+ + L G+
Sbjct: 351 NGCSEEAVRVFSEM--QRDGIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALVSGLM-- 405
Query: 351 AEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
HY V V L G+ G ++ A+ + EM +S W AL++ +G+ +
Sbjct: 406 --HYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVSGYAQFGRAK 456
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 167/342 (48%), Gaps = 7/342 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + I+ + +TF + A AL GKQ+HA +++ +VFVG + DMYSK
Sbjct: 263 MRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRS 322
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M +N+ +W A I G + A+ F ++R G +PD T + +++
Sbjct: 323 IKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISS 382
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG ++V N LV YGKC + A +FD + + VSW
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ Y Q + +F +GV+P VLSAC+R +E GRS H++
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQK 502
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ + ++D+Y + G +++AE +MP + + W ++ +G ++
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGK 562
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSAC----SRAGAVEKGMK 336
+ E + + + +YV L+C + A + + +GM+
Sbjct: 563 WAAENLLEIDPQNPASYV-LLCSMHAAKGQWNEVAQLRRGMR 603
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 13/241 (5%)
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++++ +L+A + GR A V A N+F +AL+ + D E
Sbjct: 39 PPTYLLNHLLTAYGKA-----GRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEA 93
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F M +R++V +NA+I G++ G A+ + + P+ +T+ ++ A S
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G G K F+ L+ G A + +VD+ + LV A E+ + +
Sbjct: 154 GDRALG-KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTM 212
Query: 389 LLNACRVYGKPELGRIAADNLFK-LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+ R E A LF+ + DS + F G EA + + M+ G
Sbjct: 213 ITGLLRCKMVEE-----ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQG 267
Query: 448 I 448
I
Sbjct: 268 I 268
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/586 (42%), Positives = 350/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FTF + KA L GK +H LK+ D++VG ++Y++ G
Sbjct: 138 MRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGD 197
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA + F +MP+ ++ W+ IS G+ + A++ F +RR P+ TF + L A
Sbjct: 198 NDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQA 257
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L L + +HG +++G +V V N L+ Y KC + + +F+ + D+NDVSW
Sbjct: 258 SADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSW 317
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V YVQ + E +F R V+ + SS+L ACA +A LELG VH + K
Sbjct: 318 NTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAK 377
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ VG+AL+DMY KCGSI+DA F+ + R+ V WNAII GY+ G A+
Sbjct: 378 TIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKM 437
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M +C+ P+ +T V VLSACS G +++G + F SM YGI+P EHY C+V L
Sbjct: 438 FNLMKETKCK--PDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWL 495
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
+GR+G +D+A + I+++P P++ +W ALL AC ++ ELGRI+A + +L+P D +H
Sbjct: 496 MGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASH 555
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A RW VRK MK G+KK G SWI + +H F DTSH I
Sbjct: 556 VLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLIN 615
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML L + + AGY P N L DVE++EK + HSE++ALAFGL+ +P G PIRI
Sbjct: 616 GMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRII 675
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCHS K IS IVGR++IVRD NRFH F +G CSC+DYW
Sbjct: 676 KNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 216/448 (48%), Gaps = 16/448 (3%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F F + K ++ G+ +H LK G + F+G + D YS +G A ++F
Sbjct: 45 NPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVF 104
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
DE+ +++ +W I++ A++ F +R G +P+ TF L AC
Sbjct: 105 DEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFD 164
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-SWCSMLVVY 187
G+ +H ++++ ++ ++ V GL++ Y +C + A F G + KNDV W M+ +
Sbjct: 165 AGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAF-GDMPKNDVIPWSFMISRF 223
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ + E ++F RR V P F SSVL A A I L+L +++H A+KA + ++
Sbjct: 224 AQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDV 283
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
FV +AL+ Y KCG I+ + F + +RN V WN II Y G + ALS F M
Sbjct: 284 FVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRY 343
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ +A VT +L AC+ A+E G+++ + +T K ++D+ + G +
Sbjct: 344 QVQATE--VTYSSILRACATLAALELGLQV-HCLTAKTIYGQDVAVGNALIDMYAKCGSI 400
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN-----DSGNHVL 422
A + + +R +S W A++ ++G LG + A +F L D V
Sbjct: 401 KDARFMFDMLDLRDKVS-WNAIICGYSMHG---LG-VEAIKMFNLMKETKCKPDELTFVG 455
Query: 423 LSNMFAATGRWEEADLVRKEMK-DVGIK 449
+ + + TGR +E MK D GI+
Sbjct: 456 VLSACSNTGRLDEGKQYFTSMKQDYGIE 483
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 154/324 (47%), Gaps = 4/324 (1%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FDEMPERN ++ I + A + F L G E + F L
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+LGR +HG +++ G+ N + L+D Y V +A+ VFD I K+ VSW M+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y +N + F R G +P +F + VL AC + + G++VH +K E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
++VG L+++Y +CG DA AF MP+ +++ W+ +I +A G ++ AL F +M
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR- 240
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R +PN T VL A + +++ K + LK G+ ++ + G
Sbjct: 241 -RAFVIPNQFTFSSVLQASADIESLDLS-KTIHGHALKAGLSTDVFVSNALMACYAKCGC 298
Query: 367 VDRAYEIIKEMPMRPTISVWGALL 390
++++ E+ + + R +S W ++
Sbjct: 299 IEQSMELFEALSDRNDVS-WNTII 321
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
+VFD + ++N VS+ +++ Y Q+ + ++F EG E F+ ++VL +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
ELGR VH +K N F+G+AL+D Y G + A F+++ +++V W +I
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
YA AL F +M + PN T VL AC + G K + LK
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFK--PNNFTFAGVLKACLGLQNFDAG-KTVHCSVLKTN 177
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ +++L R G D A+ +MP I W +++ G+ E
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIP-WSFMISRFAQSGQSE 230
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/580 (41%), Positives = 357/580 (61%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF L A + + G+++H +++G + VG S MY+K G A +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD +PE+N+ TW I+ G+ A++ +++ P+ ITF + L C+ + L
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G+++H ++++SG+ + V N L+ Y KC + A+ +F + ++ V+W +M+ Y
Sbjct: 266 EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGY 325
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q + +F +++G++P +SVL++C+ A L+ G+ +H V A ++
Sbjct: 326 AQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDV 385
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY-AHQGHADMALSSFEEMTS 306
++ SALV MY KCGS+ DA + FN+M ERN+V W AII G A G AL F++M
Sbjct: 386 YLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK 445
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ VT VLSAC+ G VE+G K F SM L YGIKP EHY+C VDLLGRAG
Sbjct: 446 QGIK--PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 503
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
++ A +I MP P SVWGALL+ACRV+ E G AA+N+ KLDP+D G +V LS++
Sbjct: 504 LEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSI 563
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+AA GR+E+A+ VR+ M+ + K G SWI V ++H+F +D SH + +I L KL
Sbjct: 564 YAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKL 623
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
E++K GY+PDT F L+DV+EE+K + HSE++A+ +GL+ PPG+PIRI KNLR+C
Sbjct: 624 TEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVC 683
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH+A KFIS +VGRE+I RD RFH F DG CSC D+W
Sbjct: 684 GDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 200/381 (52%), Gaps = 4/381 (1%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L + + L G+++HA LKSG + ++ + MY+K G DA ++FD +
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+RN+ +W A I V G + A + ++ G +PD +TF + LNA ++ LLQLG++
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H +V +G + V LV Y KC ++ A+V+FD + +KN V+W ++ Y Q +
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ ++ T ++ V P +S+L C A LE G+ VH +++ ++V ++
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ MY KCG +++A F+ +P R++V W A++ GYA G D A++ F M +
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK-- 347
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ +T VL++CS +++G +I + + G + +V + + G +D A
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRI-HQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 373 IIKEMPMRPTISVWGALLNAC 393
+ +M R ++ W A++ C
Sbjct: 407 VFNQMSERNVVA-WTAIITGC 426
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 163/327 (49%), Gaps = 18/327 (5%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR K A+ + G F L C+ L+ GR++H +++SG N +
Sbjct: 26 GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 85
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+ Y KC + A+ VFD I D+N VSW +M+ +V + + + T + G +
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P S+L+A L+LG+ VH V+A +E VG++LV MY KCG I A +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+++PE+N+V W +I GYA QG D+AL E M + E PN +T +L C+
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM--QQAEVAPNKITFASILQGCTTPA 263
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL----GRAGLVDRAYEIIKEMPMRPTISV 385
A+E G K+ +Y I+ G VV+ L + G ++ A ++ ++P R ++
Sbjct: 264 ALEHGKKVH-----RYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVT- 317
Query: 386 WGALLNACRVYGKPELG-RIAADNLFK 411
W A+ V G +LG A NLF+
Sbjct: 318 WTAM-----VTGYAQLGFHDEAINLFR 339
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 170/341 (49%), Gaps = 3/341 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ ++PN TF + + + GK++H ++SG +++V S MY K G
Sbjct: 240 MQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG 299
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A K+F ++P R++ TW A ++ G AI+ F +++ G +PD +TF + L +
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + LQ G+++H LV +G++ +V + + LV Y KC + A +VF+ + ++N V+W
Sbjct: 360 CSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAW 419
Query: 181 CSMLV-VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVA 238
+++ Q+ + F +++G++P +SVLSAC + +E GR ++
Sbjct: 420 TAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 479
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+ ++ + S VD+ G+ G +++AE MP W A++ +
Sbjct: 480 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERG 539
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ E + + + YV L + +A R EK ++
Sbjct: 540 ERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVM 580
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/586 (40%), Positives = 352/586 (60%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P++FTFPC+ K S L G+Q+HAL +K G FV + MY+ G
Sbjct: 115 MHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGE 174
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FDEM ERN+ TWN+ + G + + F + D +T + L A
Sbjct: 175 VEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTA 234
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + L+LG ++ ++ G GN ++ LVD Y KC +V A+ +FD + ++ V+W
Sbjct: 235 CGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAW 294
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q +F ++ ++P + + S+LS+CA + LE G+ VH K
Sbjct: 295 SAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKK 354
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + +G+AL+D Y KCGS++ + F KMP +N++ W +I G A G AL
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M E PN VT + VLSACS AG V++G +F SM+ +GI+P EHY C+VD+
Sbjct: 415 FYLMLEKNVE--PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDI 472
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAGL++ A++ IK MP++P +W LL +C+V+ E+G + L L+P SG++
Sbjct: 473 LGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDY 532
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++A+ GRWE+A VR EMK+ GIKK GCS I + IH F A+D H ++ EI
Sbjct: 533 ILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIY 592
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ + +++K+AGY+P+T A D EE++K + V HHSEK+A+AFGLI PPG IRIT
Sbjct: 593 NAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRIT 652
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K +S + RE++VRD RFH F +G CSC+DYW
Sbjct: 653 KNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 190/393 (48%), Gaps = 12/393 (3%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +F ++ E + +N I L P AI F + +PD TF L C
Sbjct: 75 DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S L G Q+H +++ GF + V N L+ Y C EV +A+ VFD + ++N +W
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWN 194
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM Y ++ E ++F + + + SVL+AC R+A LELG ++ +
Sbjct: 195 SMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEK 254
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++GN + ++LVDMY KCG + A F++M R++V W+A+I GY+ AL F
Sbjct: 255 GLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + PN +T+V +LS+C+ GA+E G + + + K +K ++D
Sbjct: 315 HEMQKANID--PNEITMVSILSSCAVLGALETGKWVHFFIK-KKRMKLTVTLGTALMDFY 371
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF-----KLDPND 416
+ G V+ + E+ +MP++ +S W L+ G+ G+ A + + ++PND
Sbjct: 372 AKCGSVESSIEVFGKMPVKNVLS-WTVLIQGLASNGQ---GKKALEYFYLMLEKNVEPND 427
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+LS A E DL +D GI+
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE 460
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/580 (43%), Positives = 352/580 (60%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FTF + AS+A + + G+QLH+L K G ++FVG + DMY+K A ++
Sbjct: 243 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 302
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSL 126
FD+MPERNL +WN+ I A+ F + LR P+ ++ + L+AC++
Sbjct: 303 FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 362
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L GRQ+HG +V+ G V N L+D Y KC +F + D++ V+W +++
Sbjct: 363 LNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 422
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+VQN + E C F RREG+ P + S+VL + A +A L G ++H +K N
Sbjct: 423 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKN 482
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +L+ MY KCGS+ DA F + + N++ W A+I Y G A+ + FE M S
Sbjct: 483 MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS 542
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E P++VT VCVLSACS G VE+G+ F SM + + PG EHYAC+VDLLGRAG
Sbjct: 543 EGIE--PSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGW 600
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+D A I+ MPM+PT SVWGALL ACR YG ++GR AA+ LF+++P + GN+VLL+NM
Sbjct: 601 LDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM 660
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+GR EEA+ VR+ M G++K GCSWI VKN +F A D SH + EI ML KL
Sbjct: 661 CTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKL 720
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+ +K GY+ +T F +EE E+ + +HSEK+ALAFGL+ +P PIRI KNLR C
Sbjct: 721 EKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTC 780
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G CH+ K S I RE+IVRD NRFHRF DG+CSC DYW
Sbjct: 781 GHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 7/370 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVL 88
Q+H + + F+ + ++Y+K G + A +F + + TW + I++
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A+ F +R +G P+ TF + L+A + ++ G+QLH + + GFD N+ V
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-G 207
LVD Y KC ++ A VFD + ++N VSW SM+V + N + +F RE
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P + +SSVLSACA + GL GR VH V VK + +V ++L+DMY KC +
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGV 402
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F + +R++V WN ++ G+ + A + F M R +P+ + VL + +
Sbjct: 403 KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR--REGILPDEASFSTVLHSSAS 460
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+ +G I + +K G ++ + + G + AY++ + + IS W
Sbjct: 461 LAALHQGTAI-HDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS-WT 518
Query: 388 ALLNACRVYG 397
A+++A +++G
Sbjct: 519 AMISAYQLHG 528
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R + + PN+ + + A + + G+Q+H + +K G + +V S DMY K
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K+F + +R++ TWN + V + + A + F +RR G PD +F L++
Sbjct: 398 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 457
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + L G +H +++ G+ N+ + L+ Y KC + A VF+GI D N +SW
Sbjct: 458 SASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISW 517
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y + ++F EG+EP VLSAC+ +E G + H ++K
Sbjct: 518 TAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMK 576
Query: 241 ACVEGNIFVG--SALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMA 297
+ N + +VD+ G+ G + +A+ MP + W A++G G+ M
Sbjct: 577 KIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMG 636
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ E + M NYV L + C+R+G +E+ ++
Sbjct: 637 REAAERLFEMEPYNPGNYVLLA---NMCTRSGRLEEANEV 673
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 136/276 (49%), Gaps = 5/276 (1%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-- 174
LN L+ Q+H ++ + + + N L++ Y KC + A ++F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K V+W S++ +F R G P F SS+LSA A + G+ +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H++ K + NIFVG+ALVDMY KC + A F++MPERNLV WN++I G+ H
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D A+ F+++ + +PN V++ VLSAC+ G + G ++ + + +KYG+ P
Sbjct: 328 DRAVGVFKDVLREKT-VIPNEVSVSSVLSACANMGGLNFGRQV-HGVVVKYGLVPLTYVM 385
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++D+ + D ++ + + R ++ W L+
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVT-WNVLV 420
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 355/558 (63%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ +HA S D+ + +MY+K G ++A +FD+MP +++ +W IS
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+ A+ F + G +P+ T + L A GRQLH F ++ G+D NV V
Sbjct: 184 SGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHV 243
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y + + AKV+F+ + KN VSW +++ + + E E+ ++FL R+G
Sbjct: 244 GSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGF 303
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP F SSV +ACA LE G+ VHA +K+ + ++G+ L+DMY K GSI+DA+
Sbjct: 304 EPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 363
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ ++++V WN+II GYA G AL FE+M ++ + PN +T + VL+ACS +
Sbjct: 364 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM--LKAKVQPNEITFLSVLTACSHS 421
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +++G + ++ + K+ I+ H+ VVDLLGRAG ++ A + I+EMP++PT +VWGA
Sbjct: 422 GLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA 480
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL +CR++ +LG AA+ +F+LDP+DSG HVLLSN++A+ GR +A VRK MK+ G+
Sbjct: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D SH EIQ M K+ ++K GY+PDT+ L+ + +
Sbjct: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+++ ++ +HSEK+ALAF ++ PPG+ IRI KN+RICGDCHSAFKF S ++GRE+IVRD
Sbjct: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F G CSC DYW
Sbjct: 661 TNRFHHFLHGMCSCRDYW 678
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 4/335 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
PN+FT L KAS G+QLHA +LK G +V VG S DMY++ +A
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 261
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ + +N+ +WNA I+ G ++ + F+ + R G EP T+ + AC+
Sbjct: 262 VIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSG 321
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+ +H +++SG + N L+D Y K + AK VF ++ ++ VSW S++
Sbjct: 322 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 381
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q+ Q+F + V+P + SVL+AC+ L+ G+ + K +E
Sbjct: 382 GYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA 441
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ +VD+ G+ G + +A +MP + W A++G + D+ + + E++
Sbjct: 442 QVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQI 501
Query: 305 TSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ +V L + ++ R A V K MK
Sbjct: 502 FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMK 536
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 157/290 (54%), Gaps = 4/290 (1%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
EP+ + LN C+ L+ GR +H + S F+ ++ + N +++ Y KC + A+
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+FD + K+ VSW ++ Y Q+ + +F G +P +F +SS+L A
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
GR +HA ++K + N+ VGS+L+DMY + +++A++ FN + +N+V WNA+I G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+A +G + + F +M +R P + T V +AC+ +G++E+G K ++ +K G
Sbjct: 282 HARKGEGEHVMRLFLQM--LRQGFEPTHFTYSSVFTACASSGSLEQG-KWVHAHVIKSGG 338
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+P A ++D+ ++G + A ++ + + + +S W ++++ +G
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS-WNSIISGYAQHG 387
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+EP+ + S +L+ C + L+ GR++HA + E ++ + + +++MY KCGS+++A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+KMP +++V W +I GY+ G A AL+ F +M + + PN TL +L A S
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ--PNEFTLSSLLKA-SG 217
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G + + ++ +LKYG + ++D+ R + A I + + +S W
Sbjct: 218 TGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS-WN 276
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA--------TGRWEEADLV 439
AL+ G+ E + L L H S++F A G+W A ++
Sbjct: 277 ALIAGHARKGEGE--HVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVI 334
Query: 440 R 440
+
Sbjct: 335 K 335
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ P FT+ +F A ++ GK +HA +KSG ++G + DMY+K+G
Sbjct: 298 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGS 357
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+F + ++++ +WN+ IS G A+ F + + +P+ ITF + L A
Sbjct: 358 IKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTA 417
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVS 179
CS LL G+ + + + V+ +VD G+ + A K + + I
Sbjct: 418 CSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 477
Query: 180 WCSML 184
W ++L
Sbjct: 478 WGALL 482
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/580 (41%), Positives = 356/580 (61%), Gaps = 4/580 (0%)
Query: 8 PNDFTF-PCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
P D F L K + + + G+ +HA L+S HD+ +G + +MY+K G ++A K
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F++MP+R+ TW IS RP +A+ F + R G P+ T + + A +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G QLHGF V+ GFD NV V + L+D Y + + A++VFD + +NDVSW +++
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ + E ++F R+G P F +S+ AC+ LE G+ VHA +K+ +
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
F G+ L+DMY K GSI DA F+++ +R++V WN+++ YA G A+ FEEM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR- 355
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R PN ++ + VL+ACS +G +++G +Y + K GI P A HY VVDLLGRAG
Sbjct: 356 -RVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
++RA I+EMP+ PT ++W ALLNACR++ ELG AA+++F+LDP+D G HV+L N+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A+ GRW +A VRK+MK+ G+KK CSW+ ++N IH+F A D H + EI ++
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K GY+PDT+ + V+++E+ + +HSEKIALAF L+ PPG I I KN+R+C
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH+A K S +VGRE+IVRD NRFH F DG CSC DYW
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 4/340 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SPN+FT + KA++A G QLH +K G +V VG + D+Y++ GL
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD + RN +WNA I+ + A++ F + R G P ++ + A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+ +H ++++SG N L+D Y K + A+ +FD + ++ VSW
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S+L Y Q+ + F RR G+ P + SVL+AC+ L+ G + + K
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ + +VD+ G+ G + A +MP E W A++ + ++
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ E + + + +V L + ++ R A V K MK
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/581 (40%), Positives = 358/581 (61%), Gaps = 3/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ + L K + L GK +H L S HD+ + S MY++ G + A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FDEMP R++ +W + I+ R +A+ F + G EP+ T + + C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
GRQ+H + G NV V + LVD Y +C +G A +VFD + KN+VSW +++
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + E E +F+ +REG P +F S++LS+C+ + LE G+ +HA +K+ +
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+VG+ L+ MY K GSI+DAE F+K+ + ++V N+++ GYA G A F+EM
Sbjct: 310 VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMI 369
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
E PN +T + VL+ACS A +++G K ++ + KY I+P HYA +VDLLGRAG
Sbjct: 370 RFGIE--PNDITFLSVLTACSHARLLDEG-KHYFGLMRKYNIEPKVSHYATIVDLLGRAG 426
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+D+A I+EMP+ PT+++WGALL A +++ E+G AA +F+LDP+ G H LL+N
Sbjct: 427 LLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLAN 486
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+ GRWE+ VRK MKD G+KK CSW+ V+N +H+F A D +H + +I M K
Sbjct: 487 IYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEK 546
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L +++K GY+PDT+ L V+++EK + +HSEK+AL+F L+ PPG IRI KN+R+
Sbjct: 547 LNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRV 606
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCHSA K++S +V RE+IVRD NRFH F DG+CSC DYW
Sbjct: 607 CGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE P +FT+ L + S++ GK LHA +KS Q +VG + MY+K+G
Sbjct: 267 MQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGS 326
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+K+FD++ + ++ + N+ + G K A F + R G EP+ ITF + L A
Sbjct: 327 IRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTA 386
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVS 179
CS LL G+ G + + + VS +VD G+ + AK + + I+
Sbjct: 387 CSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAI 446
Query: 180 WCSML 184
W ++L
Sbjct: 447 WGALL 451
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/587 (43%), Positives = 354/587 (60%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN FTF + AS+A + + G+QLH+L K G ++FVG + DMY+K
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLN 119
A ++FD+MPERNL +WN+ I A+ F + LR P+ ++ + L+
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC++ L GRQ+HG +V+ G V N L+D Y KC +F + D++ V+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ +VQN + E C F RREG+ P + S+VL + A +A L G ++H +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K N+ + +L+ MY KCGS+ DA F + + N++ W A+I Y G A+ +
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE M S E P++VT VCVLSACS G VE+G+ F SM + + PG EHYAC+VD
Sbjct: 301 LFEHMLSEGIE--PSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 358
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A I+ MPM+PT SVWGALL ACR YG ++GR AA+ LF+++P + GN
Sbjct: 359 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 418
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLL+NM +GR EEA+ VR+ M G++K GCSWI VKN +F A D SH + EI
Sbjct: 419 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEI 478
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
ML KL + +K GY+ +T F +EE E+ + +HSEK+ALAFGL+ +P PIRI
Sbjct: 479 YKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRI 538
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR CG CH+ K S I RE+IVRD NRFHRF DG+CSC DYW
Sbjct: 539 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ + P +FPC K+ SAL V+G+ H A G D+FV + DMYSK G
Sbjct: 2006 LRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQ 2065
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP--------DLI 112
DA +FDE+P RN+ +W + I+ V + NA+ F + E D +
Sbjct: 2066 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 2125
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L+ACS S + +HGF+V+ GFDG++ V N L+D Y KC + ++K VFD +
Sbjct: 2126 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM 2185
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELG 231
+K+D+SW SM+ VY Q+ ++F R GV +S+VL ACA L G
Sbjct: 2186 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 2245
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H +K +E N+ VG++++DMY KCG ++ A+ F++M E+N+ W A++ GY
Sbjct: 2246 KCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMH 2305
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A AL F +M +R PNY+T V VL+ACS AG VE+G F +M KY I+PG
Sbjct: 2306 GRAKEALDIFYKM--VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 2363
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDL GRAG ++ AY +IK M M+P VWG+LL ACR++ +LG IAA LF+
Sbjct: 2364 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 2423
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP++ G +VLLSN++A GRW + + +R MK+ + K G S + +K R+H+F D
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 2483
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H + I L KL E++ GY+P+ L+DV+EEEK + HSEK+A+AFG++
Sbjct: 2484 EHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNS 2543
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I I KNLR+CGDCH+ K IS +V R+ +VRD+ RFH F DG CSC DYW
Sbjct: 2544 APGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 191/379 (50%), Gaps = 33/379 (8%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA ++SG +D + +YS G A +F ++ TWN I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G + A+ + N+ G D TF + AC++ + LG+ +HG L++ GF G+V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 150 NGLVDFYGKCNEV-----------------------GL--------AKVVFDGIIDKNDV 178
N L+DFY KC GL A+ +FD I KN V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y++N + E ++F + E + P ++ + S++ AC + L LGR +H A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K C+E +++G+AL+DMY KCGSI+DA F MP ++L WN++I G AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F EM R P+ +T + VL AC V++G F MT YGI P EHY C+
Sbjct: 344 NLFSEME--RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMT 401
Query: 359 DLLGRAGLVDRAYEIIKEM 377
+L R+ +D A++ KE+
Sbjct: 402 ELYARSNNLDEAFKSTKEV 420
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 175/349 (50%), Gaps = 20/349 (5%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
N+ +WN+ I++ GG A+ AF +LR+ G P +F + +CS L GR H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
GF+ ++ V + L+D Y KC ++ A+ +FD I +N VSW SM+ YVQN + +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 195 NGCQMFLTARREGVEPKD--------FMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
N +F E E +D ++ SVLSAC+R++G + VH VK +G+
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
I VG+ L+D Y KCG ++ F+ M E++ + WN++I YA G + AL F M
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYACVVDLLGR 363
N VTL VL AC+ AGA+ G I M L+Y + G ++D+ +
Sbjct: 2219 -HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS----IIDMYCK 2273
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
G V+ A + M + + W A++ ++G+ + A D +K+
Sbjct: 2274 CGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGR---AKEALDIFYKM 2318
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 39/320 (12%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+C + RQ+H ++RSG + + L+ Y + A ++F I + +W
Sbjct: 35 QNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWN 94
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ N E ++ +G+ F V+ AC ++LG+ VH +K
Sbjct: 95 LIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKY 154
Query: 242 CVEGNIFVGSALVDMYGK-------------------------------CGSIQDAEIAF 270
G++FV + L+D Y K CG +Q+A F
Sbjct: 155 GFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIF 214
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+++P +N+V W A+I GY + AL F+ M + PN T+V ++ AC+ G
Sbjct: 215 DEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI--FPNEYTMVSLIKACTEMGI 272
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G I + +K I+ G ++D+ + G + A E+ + MP R ++ W +++
Sbjct: 273 LTLGRGI-HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMI 330
Query: 391 NACRVYGKPELGRIAADNLF 410
+ V+G LG+ A NLF
Sbjct: 331 TSLGVHG---LGQ-EALNLF 346
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 146/340 (42%), Gaps = 61/340 (17%)
Query: 169 FDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
F +DK++V SW S++ + + + F + R+ G+ P + +C+ +
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L GR H A E ++FV SAL+DMY KCG ++DA F+++P RN+V W ++I G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 288 YAHQGHADMALSSFEEMTSMRCEA-----VP-NYVTLVCVLSACSRAG-----------A 330
Y AD AL F++ E VP + V +V VLSACSR
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 331 VEKGM------------------------KIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
V+KG K+F M K I + ++ + ++GL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS-----WNSMIAVYAQSGL 2205
Query: 367 VDRAYEI----IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GN 419
A E+ ++ + +R A+L AC G G+ D + K+D + G
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
++ +M+ GR E A MK+ +K SW ++
Sbjct: 2266 SII--DMYCKCGRVEMAKKTFDRMKEKNVK-----SWTAM 2298
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 31/257 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-----L 60
I+ + FTFP + KA + GK +H +K G DVFV + D Y K G L
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180
Query: 61 K--------------------------DDADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
K +A ++FDE+P +N+ +W A I+ + +P+
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F ++ P+ T + + AC++ +L LGR +H + +++ + V + L+D
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + A VF+ + K+ +W SM+ + + +F R V+P
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 215 ISSVLSACARIAGLELG 231
VL AC I ++ G
Sbjct: 361 FIGVLCACVHIKNVKEG 377
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN++T L KA + + I G+ +H A+K+ V++G + DMYSK G
Sbjct: 248 MQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGS 307
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ MP ++L TWN+ I++ + G + A++ F + R +PD ITF L A
Sbjct: 308 IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCA 367
Query: 121 C 121
C
Sbjct: 368 C 368
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/579 (40%), Positives = 361/579 (62%), Gaps = 4/579 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYSKTG 59
++R + P+ + L K + L G+ +HA + S + + V + +MY+K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA +MFDEMP +++ TW A I+ RP++A+ F + R G +P+ T + L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L G QLH F ++ G+ +V V + LVD Y +C + A++ FDG+ K++VS
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ + + E E+ + +R+ +P F SSVLSACA I LE G+ VHA +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ ++ F+G+ L+DMY K GSI DA+ F+++ + ++V WN ++ G A G L
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M +R PN ++ +CVL+ACS +G +++G+ ++ + KY ++P HY VD
Sbjct: 378 RFEQM--LRIGIEPNEISFLCVLTACSHSGLLDEGL-YYFELMKKYKVEPDVPHYVTFVD 434
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR GL+DRA I+EMP+ PT +VWGALL ACR++ ELG AA+ F+LDP+DSG
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+LLSN++A+ GRW + VRK MK+ G+KK CSW+ ++N +H+F A D +H R EI
Sbjct: 495 RMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ ++ ++K GY+PDT+ L V+++E+ ++ +HSEK+ALAF L+ P G PIRI
Sbjct: 555 RGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRI 614
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
KN+R+CGDCH+A KF+S +V RE+IVRD NRFHRF DG
Sbjct: 615 KKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ + P +FPC K+ SAL V+G+ H A G D+FV + DMYSK G
Sbjct: 1133 LRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQ 1192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP--------DLI 112
DA +FDE+P RN+ +W + I+ V + NA+ F + E D +
Sbjct: 1193 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 1252
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L+ACS S + +HGF+V+ GFDG++ V N L+D Y KC + ++K VFD +
Sbjct: 1253 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM 1312
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELG 231
+K+D+SW SM+ VY Q+ ++F R GV +S+VL ACA L G
Sbjct: 1313 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H +K +E N+ VG++++DMY KCG ++ A+ F++M E+N+ W A++ GY
Sbjct: 1373 KCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMH 1432
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A AL F +M +R PNY+T V VL+ACS AG VE+G F +M KY I+PG
Sbjct: 1433 GRAKEALDIFYKM--VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 1490
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDL GRAG ++ AY +IK M M+P VWG+LL ACR++ +LG IAA LF+
Sbjct: 1491 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 1550
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP++ G +VLLSN++A GRW + + +R MK+ + K G S + +K R+H+F D
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 1610
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H + I L KL E++ GY+P+ L+DV+EEEK + HSEK+A+AFG++
Sbjct: 1611 EHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNS 1670
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I I KNLR+CGDCH+ K IS +V R+ +VRD+ RFH F DG CSC DYW
Sbjct: 1671 APGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 191/379 (50%), Gaps = 33/379 (8%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA ++SG +D + +YS G A +F ++ TWN I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G + A+ + N+ G D TF + AC++ + LG+ +HG L++ GF G+V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 150 NGLVDFYGKCNEV-----------------------GL--------AKVVFDGIIDKNDV 178
N L+DFY KC GL A+ +FD I KN V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y++N + E ++F + E + P ++ + S++ AC + L LGR +H A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K C+E +++G+AL+DMY KCGSI+DA F MP ++L WN++I G AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F EM R P+ +T + VL AC V++G F MT YGI P EHY C+
Sbjct: 344 NLFSEME--RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMT 401
Query: 359 DLLGRAGLVDRAYEIIKEM 377
+L R+ +D A++ KE+
Sbjct: 402 ELYARSNNLDEAFKSTKEV 420
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A + + + N+ +WN+ I++ GG A+ AF +LR+ G P +F + +CS
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L GR H GF+ ++ V + L+D Y KC ++ A+ +FD I +N VSW SM
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKD--------FMISSVLSACARIAGLELGRSVH 235
+ YVQN + +N +F E E +D ++ SVLSAC+R++G + VH
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
VK +G+I VG+ L+D Y KCG ++ F+ M E++ + WN++I YA G +
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAE 352
AL F M N VTL VL AC+ AGA+ G I M L+Y + G
Sbjct: 1335 EALEVFHGMVR-HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++D+ + G V+ A + M + + W A++ ++G+ + A D +K+
Sbjct: 1394 ----IIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGR---AKEALDIFYKM 1445
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 39/319 (12%)
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+C + RQ+H ++RSG + + L+ Y + A ++F I + +W
Sbjct: 36 NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNL 95
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ N E ++ +G+ F V+ AC ++LG+ VH +K
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 243 VEGNIFVGSALVDMYGK-------------------------------CGSIQDAEIAFN 271
G++FV + L+D Y K CG +Q+A F+
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
++P +N+V W A+I GY + AL F+ M + PN T+V ++ AC+ G +
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI--FPNEYTMVSLIKACTEMGIL 273
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G I + +K I+ G ++D+ + G + A E+ + MP R ++ W +++
Sbjct: 274 TLGRGI-HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMIT 331
Query: 392 ACRVYGKPELGRIAADNLF 410
+ V+G LG+ A NLF
Sbjct: 332 SLGVHG---LGQ-EALNLF 346
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 31/257 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-----L 60
I+ + FTFP + KA + GK +H +K G DVFV + D Y K G L
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180
Query: 61 K--------------------------DDADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
K +A ++FDE+P +N+ +W A I+ + +P+
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F ++ P+ T + + AC++ +L LGR +H + +++ + V + L+D
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + A VF+ + K+ +W SM+ + + +F R V+P
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 215 ISSVLSACARIAGLELG 231
VL AC I ++ G
Sbjct: 361 FIGVLCACVHIKNVKEG 377
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN++T L KA + + I G+ +H A+K+ V++G + DMYSK G
Sbjct: 248 MQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGS 307
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ MP ++L TWN+ I++ + G + A++ F + R +PD ITF L A
Sbjct: 308 IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCA 367
Query: 121 C 121
C
Sbjct: 368 C 368
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/581 (40%), Positives = 360/581 (61%), Gaps = 4/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P + + + L G+ +HA S D+ + +MY+K G ++A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP +++ +W IS G+ A+ F + G +P+ T + L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
GRQLH F ++ G+D NV V + L+D Y + + AKV+F+ + KN VSW +++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ + E E+ ++F R+G EP F SSVL ACA LE G+ VHA +K+ +
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++G+ L+DMY K GSI+DA+ F ++ ++++V WN+II GYA G AL FE+M
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM- 398
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ + PN +T + VL+ACS +G +++G + ++ + K+ I+ H+ VVDLLGRAG
Sbjct: 399 -LKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAG 456
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ A + I+EMP++PT +VWGALL ACR++ +LG AA+ +F+LDP+DSG HVLLSN
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 516
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+ GR +A VRK MK+ G+KK CSW+ ++N +H+F A D SH EIQ M K
Sbjct: 517 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 576
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ ++K GY+PDT+ L+ + ++++ ++ +HSEK+ALAF ++ PPG+ IRI KN+RI
Sbjct: 577 ISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRI 636
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCHSAFKF S ++GRE+IVRD NRFH F G CSC DYW
Sbjct: 637 CGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/587 (40%), Positives = 362/587 (61%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+ E + P+ FT + +A S+L + +Q+H ALK+G I D FV + D+YSK+G
Sbjct: 996 LLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSG 1055
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
++A+ +F + +LA WNA + ++G K A++ F + ++G + D IT
Sbjct: 1056 KMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAK 1115
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC LL G+Q+H +++GFD ++ V +G++D Y KC ++ A +VF+ I +DV+
Sbjct: 1116 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 1175
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ V N E+ +++ R+ V P ++ ++++ A + + LE GR +HA +
Sbjct: 1176 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 1235
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + FVG++LVDMY KCG+I+DA F KM RN+ WNA++ G A G+A+ A++
Sbjct: 1236 KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVN 1295
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M S E P+ V+ + +LSACS AG + + +SM YGI+P EHY+C+VD
Sbjct: 1296 LFKSMKSHGIE--PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 1353
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LGRAGLV A ++I+ MP + + S+ ALL ACR+ G E G+ A LF L+P DS
Sbjct: 1354 ALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAA 1413
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN++AA RW++ RK MK +KK G SWI VKN +H+F D SH + I
Sbjct: 1414 YVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADII 1473
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ ++ + ++ GY+PDT F L DVE+EEK + +HSEK+A+A+GLI+ P IR+
Sbjct: 1474 YDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRV 1533
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A K+IS + RE+++RD NRFH F DG CSC DYW
Sbjct: 1534 IKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 9/384 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+H +A+KSG DV V S +MYSK G A ++F++M +L +WN+ IS+
Sbjct: 923 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 982
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVRSGFDGNVS 147
+ +++ FI+L G +PD T + L ACS L + RQ+H +++G +
Sbjct: 983 SSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSF 1042
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+D Y K ++ A+ +F D + W +M+ Y+ + + ++F + G
Sbjct: 1043 VATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSG 1102
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ +++ AC + L+ G+ +HA A+KA + ++ V S ++DMY KCG + +A
Sbjct: 1103 EKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I FN + + V W ++I G G+ D AL + M R +P+ T ++ A S
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV--MPDEYTFATLIKASSC 1220
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+E+G ++ ++ +K +VD+ + G ++ AY + K+M +R I++W
Sbjct: 1221 VTALEQGRQL-HANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWN 1278
Query: 388 ALLNACRVYGKPELGRIAADNLFK 411
A+L +G E A NLFK
Sbjct: 1279 AMLVGLAQHGNAE----EAVNLFK 1298
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 170/363 (46%), Gaps = 24/363 (6%)
Query: 56 SKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFC 115
+K L DD +F WN +S + G AI+ F+N+ + D +T
Sbjct: 858 AKLSLSDDNPDVF---------CWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLL 908
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L A + L+LG+Q+HG V+SG D +VSV N LV+ Y K A+ VF+ +
Sbjct: 909 VVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 968
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR-IAGLELGRSV 234
+ +SW SM+ Q+ EE +F+ EG++P F ++SVL AC+ I GL + R +
Sbjct: 969 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQI 1028
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H A+K + FV + L+D+Y K G +++AE F + +L CWNA++ GY
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F + + + +TL AC +++G +I ++ +K G
Sbjct: 1089 KKALELFSLI--HKSGEKSDQITLATAAKACGCLVLLDQGKQI-HAHAIKAGFDSDLHVN 1145
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC----------RVYGKPELGRI 404
+ ++D+ + G + A I+ P W ++++ C R+Y + R+
Sbjct: 1146 SGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 1204
Query: 405 AAD 407
D
Sbjct: 1205 MPD 1207
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 165/386 (42%), Gaps = 40/386 (10%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L + + + H + GK HA + SG D F+ + MYSK G A ++FD PER+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 76 LATWNAYISNAVLG-----GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
L TWNA + G + + F LR + G +T L C + L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+HG+ ++ G + +V V LV+ Y KC + A+++FD + +++ V W ML YVQ
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARI---AGLELGRSVHAVAVKACVEGNI 247
E+ Q+F R G+ P +F + +L+ + + G L V A A K + +
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD- 865
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
++ CWN + G A+ F M +
Sbjct: 866 ---------------------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGL 898
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ + VTL+ VL+A + +E G ++ + + +K G+ +V++ + G
Sbjct: 899 NIDY--DAVTLLVVLAAVAGTDDLELGKQV-HGIAVKSGLDSDVSVANSLVNMYSKMGCA 955
Query: 368 DRAYEIIKEMPMRPTISVWGALLNAC 393
A E+ +M IS W +++++C
Sbjct: 956 YFAREVFNDMKHLDLIS-WNSMISSC 980
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/613 (40%), Positives = 358/613 (58%), Gaps = 34/613 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMY---------- 55
+ PN +TFP L K+ + + GKQ+H LK G D FV S +MY
Sbjct: 128 VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAE 187
Query: 56 ---SKTGLKD------------------DADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
SK+ L+D DA ++F+E+P R+ +WNA I+ GR +
Sbjct: 188 LVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEE 247
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ F ++R P+ T L+AC+ L+LG + ++ G N+ + N L+D
Sbjct: 248 ALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC ++ A+ +F+GI +K+ +SW M+ Y + +F ++ VEP D
Sbjct: 308 MYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVT 367
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVE-GNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S+L ACA + L+LG+ +HA K + N + ++L+DMY KCG+I+ A+ F M
Sbjct: 368 FVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++L WNA+I G A GHA+MAL F +M E P+ +T V VLSACS AG VE
Sbjct: 428 KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFE--PDDITFVGVLSACSHAGLVEL 485
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G + F SM Y I P +HY C++DLLGRAGL D A ++K M M+P ++WG+LL AC
Sbjct: 486 GRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGAC 545
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+G ELG AA +LF+L+P + G +VLLSN++A GRW++ +R ++ D G+KK G
Sbjct: 546 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 605
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I V + +H F D HE++ +I ML ++ + ++ AG++PDT+ LYD++EE K
Sbjct: 606 CSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEG 665
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ P IRI KNLR+CG+CHSA K IS I RE+I RD NRFH
Sbjct: 666 SLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFH 725
Query: 574 RFWDGYCSCSDYW 586
F DG CSC DYW
Sbjct: 726 HFKDGSCSCMDYW 738
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 196/422 (46%), Gaps = 42/422 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSA---FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQ+H+ +K+G +H+ S F S G A +F+ + + N WN I
Sbjct: 49 KQIHSQIIKTG-LHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
L P AID ++ + G EP+ TF L +C+ Q G+Q+HG +++ G + +
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID-----------K 175
V L++ Y + E+G A++VF G +D +
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VSW +M+ Y Q+ E F +R V P + + +VLSACA+ LELG V
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ + N+ + +AL+DMY KCG + A F + E++++ WN +IGGY+H
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL+ F +M E PN VT V +L AC+ GA++ G I + K+ +
Sbjct: 348 EALALFRKMQQSNVE--PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP----ELGRIAADNLFK 411
++D+ + G ++ A ++ M + ++ W A+++ ++G EL R D F+
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALELFRQMRDEGFE 464
Query: 412 LD 413
D
Sbjct: 465 PD 466
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 139/306 (45%), Gaps = 37/306 (12%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAKVVFDGIIDK 175
L S C Q +Q+H ++++G + L++F + A ++F+ I
Sbjct: 36 LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W +M+ + ++ GVEP + +L +CA++ + G+ +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK----------------------- 272
+K +E + FV ++L++MY + G + AE+ F+K
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 273 --------MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+P R+ V WNA+I GYA G + AL+ F+EM R PN T+V VLSA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK--RANVAPNESTMVTVLSA 273
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+++G++E G + S +G+ ++D+ + G +D+A ++ + + + IS
Sbjct: 274 CAQSGSLELGNWV-RSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 385 VWGALL 390
W ++
Sbjct: 333 -WNVMI 337
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHA-LALKSGQIHDVFVGCSAFDMYSKTG 59
M++ + PND TF + A + L GK +HA + K + + + S DMY+K G
Sbjct: 356 MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCG 415
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A ++F M ++L +WNA IS + G A++ F +R G EPD ITF L+
Sbjct: 416 NIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
Query: 120 ACSDCSLLQLGRQ 132
ACS L++LGRQ
Sbjct: 476 ACSHAGLVELGRQ 488
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/591 (43%), Positives = 367/591 (62%), Gaps = 6/591 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I P FT + ++L G+Q+H +LK G +V V + +Y++TG
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
++ K+F MPE + +WN+ I R A+ F+N +R G + + ITF + L+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A S S +LG+Q+HG +++ + N L+ YGKC E+ + +F + ++ D V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W SM+ Y+ N + + G FM ++VLSA A +A LE G VHA +
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+AC+E ++ VGSALVDMY KCG + A FN MP RN WN++I GYA G + AL
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
FE M + + P++VT V VLSACS AG +E+G K F SM+ YG+ P EH++C+
Sbjct: 706 KLFETM-KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYG-KPELGRIAADNLFKLDPND 416
D+LGRAG +D+ + I++MPM+P + +W +L AC R G K ELG+ AA+ LF+L+P +
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLL NM+AA GRWE+ RK+MKD +KK AG SW+++K+ +H+F A D SH
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDA 884
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI-PPGV 535
I L +L +M+ AGY+P T FALYD+E+E K + +HSEK+A+AF L A +
Sbjct: 885 DVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTL 944
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+CGDCHSAFK+IS I GR++I+RD+NRFH F DG CSCSD+W
Sbjct: 945 PIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 194/401 (48%), Gaps = 15/401 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKT 58
M+ + P ++TF L + +L P +Q+ KSG + D+FVG ++K+
Sbjct: 197 MQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAF 117
G A K+F++M RN T N + V + A F+++ P+ ++
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVIL 314
Query: 118 LNACSDCSL-----LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
L++ + SL L+ GR++HG ++ +G D V + NGLV+ Y KC + A+ VF
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ DK+ VSW SM+ QN + + + RR + P F + S LS+CA + +LG
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H ++K ++ N+ V +AL+ +Y + G + + F+ MPE + V WN+IIG A
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 292 GHA-DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ A+ F + + R N +T VLSA S E G +I + + LK I
Sbjct: 495 ERSLPEAVVCF--LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADE 551
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
A ++ G+ G +D +I M R W ++++
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 23/342 (6%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
H+ K+ DV++ + + Y +TG A K+FDEMP RN +W +S G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL--GRQLHGFLVRSGFDGNVSVC 149
K A+ ++ + G + F + L AC + + + GRQ+HG + + + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 150 NGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC VG A F I KN VSW S++ VY Q ++ + ++F + + +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 209 EPKDFMISS-VLSACARI-AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
P ++ S V +AC+ + L + K+ + ++FVGS LV + K GS+ A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
FN+M RN V N ++ G Q + A F +M SM + +YV L+
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE-- 320
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
YS+ + G+K G E + V+ GLVD
Sbjct: 321 ------------YSLAEEVGLKKGREVHGHVIT----TGLVD 346
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 187/406 (46%), Gaps = 22/406 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIP--VTGKQLHALALKSGQIHDVFVGCSAFDMYSK- 57
M +E I N + F + +A + + G+Q+H L K D V MY K
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G A F ++ +N +WN+ IS G ++A F +++ G P TF +
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 118 LNACSDCSL----LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ CSL ++L Q+ + +SG ++ V +GLV + K + A+ VF+ +
Sbjct: 213 VTTA--CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLS-----ACARIAG 227
+N V+ ++V V+ E ++F+ V P+ ++I +LS + A G
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVG 328
Query: 228 LELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L+ GR VH V V+ + +G+ LV+MY KCGSI DA F M +++ V WN++I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
G G A+ ++ M R + +P TL+ LS+C+ + G +I + +LK G
Sbjct: 389 GLDQNGCFIEAVERYKSMR--RHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLG 445
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
I ++ L G ++ +I MP +S W +++ A
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 19/327 (5%)
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
R H L ++ D +V +CN L++ Y + + A+ VFD + +N VSW ++ Y +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA--GLELGRSVHAVAVKACVEGNI 247
N E + +EG+ + SVL AC I G+ GR +H + K +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 248 FVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V + L+ MY KC GS+ A AF + +N V WN+II Y+ G S+F +S
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR---SAFRIFSS 196
Query: 307 MRCEAV--PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M+ + Y V +ACS + ++ K G+ + +V ++
Sbjct: 197 MQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A ++ +M R +++ G ++ R E ++ D +D + +LLS
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKG 451
+ + E L ++VG+KKG
Sbjct: 317 S-------FPEYSLA----EEVGLKKG 332
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/590 (42%), Positives = 356/590 (60%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M+RE + PN T+ L A S+ALH GK++H+ K+G D+ V + MYS+
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALH---WGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G DA +FD+M +++ +W A I G A+ + +++ G EP+ +T+ +
Sbjct: 376 CGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSI 435
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LNACS + L+ GR++H +V +G + V N LV+ Y C V A+ VFD +I ++
Sbjct: 436 LNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDI 495
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V++ +M+ Y + + ++F + EG++P ++L+ACA LE R +H +
Sbjct: 496 VAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTL 555
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
K + VG+ALV Y KCGS DA I F KM +RN++ WNAIIGG A G A
Sbjct: 556 VRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDA 615
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L FE M + E V P+ VT V +LSACS AG +E+G + F SM+ + I P EHY C
Sbjct: 616 LQLFERM---KMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC 672
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG +D A +IK MP + +WGALL ACR++G + AA++ KLD ++
Sbjct: 673 MVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDN 732
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ +V LS+M+AA G W+ A +RK M+ G+ K G SWI V +++H F A+D SH ++
Sbjct: 733 AVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQS 792
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+I A L +L MK GY+PDT ++DV+E EK V HHSE++A+A+GLI+ PPG
Sbjct: 793 EKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTR 852
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I I KNLR+C DCH+A KFIS IV RE+I RD NRFH F DG CSC DYW
Sbjct: 853 IHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 227/449 (50%), Gaps = 15/449 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ ++P+ T + + G+++H A+++G + DV V +MY+K G
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS 176
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++FD+M ++++ +W I GR + A + F + + G P+ IT+ + LNA
Sbjct: 177 IEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNA 236
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L+ G+ +H ++ +G + + +V LV Y KC + VF+ +++++ ++W
Sbjct: 237 FSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 296
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + E +++ +REGV P +L+AC A L G+ +H+ K
Sbjct: 297 NTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAK 356
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A +I V +AL+ MY +CGSI+DA + F+KM ++++ W A+IGG A G AL+
Sbjct: 357 AGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTV 416
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
++EM E PN VT +L+ACS A+E G +I + ++ G+ A +V++
Sbjct: 417 YQEMQQAGVE--PNRVTYTSILNACSSPAALEWGRRI-HQQVVEAGLATDAHVGNTLVNM 473
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN----D 416
G V A ++ M R ++ + A++ Y LG+ A +L D
Sbjct: 474 YSMCGSVKDARQVFDRMIQRDIVA-YNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPD 529
Query: 417 SGNHVLLSNMFAATGRWEEA----DLVRK 441
++ + N A +G E A LVRK
Sbjct: 530 KVTYINMLNACANSGSLEWAREIHTLVRK 558
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 188/366 (51%), Gaps = 6/366 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP--ERNLATWNAYIS 84
V G+Q+H ++ + D + + +MY + G ++A +++ ++ ER + +WNA +
Sbjct: 40 VAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVV 99
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
+ G + A+ +++ G PD T +FL++C L+ GR++H +++G
Sbjct: 100 GYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLF 159
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V V N +++ Y KC + A+ VFD + K+ VSW + Y E ++F
Sbjct: 160 DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+EGV P SVL+A + A L+ G++VH+ + A E + VG+ALV MY KCGS +
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYK 279
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D F K+ R+L+ WN +IGG A G+ + A + +M R +PN +T V +L+A
Sbjct: 280 DCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQM--QREGVMPNKITYVILLNA 337
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C + A+ G +I +S K G ++ + R G + A + +M + IS
Sbjct: 338 CVNSAALHWGKEI-HSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396
Query: 385 VWGALL 390
W A++
Sbjct: 397 -WTAMI 401
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 150/298 (50%), Gaps = 6/298 (2%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+D L++ G + + + L C + L GRQ+H +++ + N L++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 155 FYGKCNEVGLAKVVFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
Y +C + A+ V+ + +++ SW +M+V Y+Q E ++ ++ G+ P
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
I S LS+C LE GR +H A++A + ++ V + +++MY KCGSI++A F+K
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M ++++V W IGGYA G ++ A F++M VPN +T + VL+A S A++
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQE--GVVPNRITYISVLNAFSSPAALK 244
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G K +S L G + +V + + G ++ +++ R I+ W ++
Sbjct: 245 WG-KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-WNTMI 300
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/587 (40%), Positives = 342/587 (58%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN T + A + L + GK +H +K+ D+ G + MY+K G
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A F+ M R++ TWN+ I+ G P NAID F LR + PD T + A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVS 179
C+ + L G +HG +V+ GF+ + V N L+D Y KC + A+ +F+ K++V+
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W ++ Y+QN + F R E P SVL A A +A G + HA +
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ N VG++L+DMY KCG + +E FN+M ++ V WNA++ GYA GH D A++
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M + + + V+ V VLSAC AG VE+G KIF+SM+ KY IKP EHYAC+VD
Sbjct: 721 LFSLMQESQVQI--DSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 778
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAGL D IK MP+ P VWGALL +CR++ +LG +A D+L KL+P + +
Sbjct: 779 LLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAH 838
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
V+LS+++A +GRW +A R +M D+G+KK GCSW+ +KN++H F+ D SH + +
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 898
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L E+M+ GY+PD + L +VEEE+K + HSE++A+ F L+ PPG I+I
Sbjct: 899 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 958
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KFIS I R +IVRD RFH F DG CSC+DYW
Sbjct: 959 VKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 192/371 (51%), Gaps = 7/371 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H AL+ D+ V MY+K G + A ++F + R+L W+A I+ V
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P+ A+ F ++ +P+ +T + L AC+D SLL+LG+ +H F V++ D ++S
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LV Y KC A F+ + ++ V+W S++ Y Q + N MF R +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + V+ ACA + L+ G +H + VK E + V +AL+DMY KCGS+ AE
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEF 587
Query: 269 AFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 326
FNK ++ V WN II Y GHA A+SSF + MR E PN VT V VL A +
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ---MRLENFHPNSVTFVSVLPAAA 644
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
A +GM F++ ++ G ++D+ + G +D + ++ EM + T+S W
Sbjct: 645 YLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-W 702
Query: 387 GALLNACRVYG 397
A+L+ V+G
Sbjct: 703 NAMLSGYAVHG 713
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 200/412 (48%), Gaps = 9/412 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ +TF + KA + G H + G DVF+G DMYSK G
Sbjct: 120 MVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGD 179
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD+MP+R++ WNA I+ P A+D F +++ G EP ++
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S ++L R +HG++ R F VS NGL+D Y KC +V +A+ VFD ++D++DVSW
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N ++F + V S A A LE G+ +H A++
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ +I V + L+ MY KCG + A+ F + R+LV W+AII G+ + ALS
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + + + PN VTL+ +L AC+ ++ G I + T+K + +V +
Sbjct: 418 FQEMQNQKMK--PNRVTLMSILPACADLSLLKLGKSI-HCFTVKADMDSDLSTGTALVSM 474
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ G A M R ++ W +L+N G P A D +KL
Sbjct: 475 YAKCGFFTAALTTFNRMSSRDIVT-WNSLINGYAQIGDP---YNAIDMFYKL 522
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
D+YSK G D A ++FD+M +++ +W ++ G ++ F ++ + +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + A ++ L+ G+++HG ++ D ++ V L+ Y KC E AK +F G+
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++ V+W +++ VQ E +F + + ++P + S+L ACA ++ L+LG+
Sbjct: 391 QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK 450
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
S+H VKA ++ ++ G+ALV MY KCG A FN+M R++V WN++I GYA G
Sbjct: 451 SIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
A+ F + +R A+ P+ T+V V+ AC+ +++G I + + +K G +
Sbjct: 511 DPYNAIDMFYK---LRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDC 566
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++D+ + G + A + + W ++ A
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA + SG H + ++YS D A +FD P + WN+ I
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A++ + + G EPD TF L AC+ LQ G HG + R G + +V +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
GLVD Y K ++ A+ VFD + ++ V+W +M+ Q+ + F + + GVEP
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++ +++ +EL RS+H + + + V + L+D+Y KCG + A F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++M +++ V W ++ GYAH G L F++M N V+ V A +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI--NKVSAVSAFLAAAETID 344
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+EKG +I + L+ I ++ + + G ++A ++ + R ++ W A++
Sbjct: 345 LEKGKEI-HGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA-WSAII 402
Query: 391 NACRVYGKPE 400
A G PE
Sbjct: 403 AALVQTGYPE 412
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 23/296 (7%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S C L Q+H ++ SGF + S+ + L++ Y ++ LA+ VFD + + + W
Sbjct: 40 SSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWN 98
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + +M+ +G+EP + + VL AC L+ G H +
Sbjct: 99 SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E ++F+G+ LVDMY K G ++ A F+KMP+R++V WNA+I G + A+ F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYACVV 358
M + E P+ V+L+ + + +E I + + G ++
Sbjct: 219 RSMQLVGVE--PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG------LI 270
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL-----NACRV-----YGKPELGRI 404
DL + G VD A + +M + +S WG ++ N C V + K +LG +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/587 (40%), Positives = 354/587 (60%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P +FTF + A+ L V G+Q+H+ +K+ + +VFV + D YSK
Sbjct: 241 MQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDS 300
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FDEMPE++ ++N IS G+ K A D F L+ T + F L+
Sbjct: 301 VIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSI 360
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S+ ++GRQ+H + + D + V N LVD Y KC + A+++F + ++ V W
Sbjct: 361 ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPW 420
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YVQ E G Q+F R+ V +S+L A A IA L LG+ +H+ +K
Sbjct: 421 TAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIK 480
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+F GSAL+D+Y KCGSI+DA F +MP+RN+V WNA+I YA G A+ L S
Sbjct: 481 SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKS 540
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + P+ V+ + VLSACS +G VE+G+ F SMT Y + P EHYA VVD+
Sbjct: 541 FKEMVLSGLQ--PDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 598
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGN 419
L R+G + A +++ EMP+ P +W ++LNACR++ EL R AAD LF ++ D+
Sbjct: 599 LCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP 658
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V +SN++AA G+WE V K M+D G+KK SW+ +K+ H+F A D H + EI
Sbjct: 659 YVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEI 718
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ + L + M+ GY PDT+ AL++ +E+ K+ + +HSE++A+AF LI+ P G PI +
Sbjct: 719 RKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILV 778
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+A K IS IVGRE+ VRD+ RFH F DG+CSC D+W
Sbjct: 779 MKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 225/481 (46%), Gaps = 43/481 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R P+ TF L + + Q+ +K G + VG + D Y K+
Sbjct: 140 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F EMPE + ++NA I+ G + A++ F+ ++ +G +P TF A L A
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LG+Q+H F++++ F NV V N L+DFY K + V A+ +FD + +++ VS+
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 319
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y + + + +F + + K F +++LS + E+GR +HA +
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 379
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ I VG++LVDMY KCG ++AE+ F + R+ V W A+I Y +G + L
Sbjct: 380 TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQL 439
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + + + T +L A + ++ G K +S +K G + ++D+
Sbjct: 440 FNKMR--QASVIADQATFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVFSGSALLDV 496
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE-------------------- 400
+ G + A + +EMP R +S W A+++A G+ E
Sbjct: 497 YAKCGSIKDAVQTFQEMPDRNIVS-WNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 555
Query: 401 -LGRIAA-----------------DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
LG ++A ++KLDP ++ + +M +GR+ EA+ + E
Sbjct: 556 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRRE-HYASVVDMLCRSGRFNEAEKLMAE 614
Query: 443 M 443
M
Sbjct: 615 M 615
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 8/350 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K+G +A K+FD M ER TW I + K A + F+ ++R G EPD +TF
Sbjct: 93 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L+ C+ + Q+ +++ G+D + V N LVD Y K N + LA +F + +
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ VS+ +M+ Y ++ +E +F+ + G++P +F ++VL A + + LG+ +
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQI 272
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ +K N+FV +AL+D Y K S+ DA F++MPE++ V +N II GYA G
Sbjct: 273 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 332
Query: 295 DMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A F E+ T+ + P +LS S E G +I ++ T+
Sbjct: 333 KYAFDLFRELQFTAFDRKQFP----FATMLSIASNTLDWEMGRQI-HAQTIVTTADSEIL 387
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+VD+ + G + A I + R + W A+++A G E G
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP-WTAMISAYVQKGFYEEG 436
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 15/294 (5%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
N IDA I +TG +PD + L RQL + N N ++
Sbjct: 37 NNIDARI--VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHK----NTVSTNMMI 90
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
Y K +G A+ +FDG++++ V+W ++ Y Q + + ++F+ +R G EP
Sbjct: 91 SGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYV 150
Query: 214 MISSVLSACARIAGLELGRSVHAVA---VKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
++LS C G E+G + V +K + + VG+ LVD Y K + A F
Sbjct: 151 TFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 207
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+MPE + V +NA+I GY+ G + A++ F EM + + P T VL A
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK--PTEFTFAAVLCANIGLDD 265
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ G +I +S +K ++D + V A ++ EMP + +S
Sbjct: 266 IVLGQQI-HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 318
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/533 (41%), Positives = 336/533 (63%), Gaps = 3/533 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLIT 113
Y+K GL +A +FD+MPER+ +W A IS V RP A++ F ++R+ + + T
Sbjct: 146 YAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFT 205
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L A + L++G+++HG+++R+G D + V + L D YGKC + A+ +FD ++
Sbjct: 206 VSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMV 265
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
D++ V+W +M+ Y Q+ + G +F R G+ P +F S VL+ACA ELG+
Sbjct: 266 DRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKK 325
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + F SALV MY KCG++ AE F + P+ +L W ++I GYA G
Sbjct: 326 VHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQ 385
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D A+ FE + ++ P+++T V VLSAC+ AG V+KG+ F+S+ +YG+ A+H
Sbjct: 386 PDEAIRYFELL--VKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADH 443
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC++DLL R+G D A II +M M+P +W +LL CR++G +L + AA+ LF+++
Sbjct: 444 YACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIE 503
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + +V L+N++A G W E +RK M D G+ K G SWI++K +H+F D SH
Sbjct: 504 PENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSH 563
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
++ EI L KL + MK G++PDTNF L+DVE+E+K + +HSEK+A+AFG+I+ P
Sbjct: 564 PKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPE 623
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PI++ KNLR C DCH+A KFIS I R++IVRD+NRFH F DG+CSC DYW
Sbjct: 624 GTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 150/309 (48%), Gaps = 6/309 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H +++G D V + DMY K G ++A +FD+M +R++ TW A I
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR K D F +L R+G P+ TF LNAC++ + +LG+++HG++ R GFD
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA 341
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV Y KC + A+ VF + SW S++ Y QN + + + F + G
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401
Query: 209 EPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P VLSACA ++ G H++ + + + ++D+ + G +AE
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461
Query: 268 IAFNKM---PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+KM P++ L W +++GG G+ +A + E + + E YVTL + +
Sbjct: 462 NIISKMSMKPDKFL--WASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYAT 519
Query: 325 CSRAGAVEK 333
V K
Sbjct: 520 AGMWSEVAK 528
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 36/340 (10%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
+N + + + +P + + +C LLQ G+++H + SGF + + N L
Sbjct: 52 QNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRL 111
Query: 153 VDFYGKCN----------------------------EVGL---AKVVFDGIIDKNDVSWC 181
++ Y KC+ ++GL AK +FD + ++++ SW
Sbjct: 112 LEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWT 171
Query: 182 SMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YV++ ++F + R + + F +SS L+A A + L +G+ +H ++
Sbjct: 172 AMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMR 231
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V SAL DMYGKCGSI++A F+KM +R++V W A+I Y G
Sbjct: 232 TGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDL 291
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F ++ +R PN T VL+AC+ + E G K+ MT + G P + + +V +
Sbjct: 292 FADL--LRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMT-RVGFDPFSFAASALVHM 348
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G + A + KE P +P + W +L+ G+P+
Sbjct: 349 YSKCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQPD 387
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R I PN+FTF + A + GK++H + G F + MYSK G
Sbjct: 297 RSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMV 356
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A+++F E P+ +L +W + I+ G+P AI F L ++G +PD ITF L+AC+
Sbjct: 357 SAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACA 416
Query: 123 DCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSW 180
L+ G H + G ++D + + A+ + + K D W
Sbjct: 417 HAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLW 476
Query: 181 CSML 184
S+L
Sbjct: 477 ASLL 480
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/574 (41%), Positives = 350/574 (60%), Gaps = 3/574 (0%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
+ L K + + G+ +H ++S HD+ + + +MY+K G ++A K+FD+MP
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
ER+ TW IS RP +A+ F + R G P+ T + + A + G Q
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LHGF V+ GFD NV V + L+D Y + + A++VFD + +NDVSW +++ + +
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
E ++F REG P F +S+ AC+ LE G+ VHA +K+ + F G+
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMY K GSI DA F+++ +R++V WN+++ YA G + A+ FEEM R
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMR--RGGIR 351
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN ++ + VL+ACS +G +++G +Y + K GI A HY +VDLLGRAG ++RA
Sbjct: 352 PNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALR 410
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
I+EMP+ PT ++W ALLNACR++ ELG AA+++F+LDP+D G HV+L N++A+ GR
Sbjct: 411 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 470
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W +A VRK+MK+ G+KK CSW+ ++N IH+F A D H + EI ++ ++K
Sbjct: 471 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 530
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
GY+PDT+ + V+++E+ + +HSEKIALAF L+ PPG I I KN+R+CGDCHSA
Sbjct: 531 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSA 590
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K S VGRE+IVRD NRFH F DG CSC DYW
Sbjct: 591 IKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 4/340 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SPN+FT + KA++A G QLH +K G +V VG + D+Y++ GL
Sbjct: 143 MLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD + RN +WNA I+ + A++ F + R G P ++ + A
Sbjct: 203 MDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGA 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+ +H ++++SG N L+D Y K + A+ +FD + ++ VSW
Sbjct: 263 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S+L Y Q+ F RR G+ P + SVL+AC+ L+ G + + K
Sbjct: 323 NSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ + +VD+ G+ G + A +MP E W A++ + ++
Sbjct: 383 DGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 442
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ E + + + +V L + ++ R A V K MK
Sbjct: 443 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 482
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/587 (40%), Positives = 341/587 (58%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN T + A + L + GK +H +K+ D+ G + MY+K G
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A F+ M R++ TWN+ I+ G P NAID F LR + PD T + A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVS 179
C+ + L G +HG +V+ GF+ + V N L+D Y KC + A+ +F+ K++V+
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W ++ Y+QN + F R E P SVL A A +A G + HA +
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ N VG++L+DMY KCG + +E FN+M ++ V WNA++ GYA GH D A++
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M + + + V+ V VLSAC G VE+G KIF+SM+ KY IKP EHYAC+VD
Sbjct: 721 LFSLMQESQVQI--DSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 778
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAGL D IK MP+ P VWGALL +CR++ +LG +A D+L KL+P + +
Sbjct: 779 LLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAH 838
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
V+LS+++A +GRW +A R +M D+G+KK GCSW+ +KN++H F+ D SH + +
Sbjct: 839 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 898
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L E+M+ GY+PD + L +VEEE+K + HSE++A+ F L+ PPG I+I
Sbjct: 899 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 958
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KFIS I R +IVRD RFH F DG CSC+DYW
Sbjct: 959 VKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 191/371 (51%), Gaps = 7/371 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H AL+ D+ V MY+K G + A ++F + R+L W+A I+ V
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P+ A+ F ++ +P+ +T + L AC+D SLL+LG+ +H F V++ D ++S
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LV Y KC A F+ + ++ V+W S++ Y Q + N MF R +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + V+ ACA + L+ G +H + VK E + V +AL+DMY KCGS+ AE
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEF 587
Query: 269 AFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 326
FNK ++ V WN II Y GHA A+SSF + MR E PN VT V VL A +
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ---MRLENFHPNSVTFVSVLPAAA 644
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
A +GM F++ ++ G ++D+ + G + + ++ EM + T+S W
Sbjct: 645 YLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-W 702
Query: 387 GALLNACRVYG 397
A+L+ V+G
Sbjct: 703 NAMLSGYAVHG 713
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 200/412 (48%), Gaps = 9/412 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ +TF + KA + G H + G DVF+G DMYSK G
Sbjct: 120 MVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGD 179
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD+MP+R++ WNA I+ P A+D F +++ G EP ++
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S ++L R +HG++ R F VS NGL+D Y KC +V +A+ VFD ++D++DVSW
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N ++F + V S A A LE G+ +H A++
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ +I V + L+ MY KCG + A+ F + R+LV W+AII G+ + ALS
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSL 417
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + + + PN VTL+ +L AC+ ++ G I + T+K + +V +
Sbjct: 418 FQEMQNQKMK--PNRVTLMSILPACADLSLLKLGKSI-HCFTVKADMDSDLSTGTALVSM 474
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ G A M R ++ W +L+N G P A D +KL
Sbjct: 475 YAKCGFFTAALTTFNRMSSRDIVT-WNSLINGYAQIGDP---YNAIDMFYKL 522
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
D+YSK G D A ++FD+M +++ +W ++ G ++ F ++ + +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + A ++ L+ G+++HG ++ D ++ V L+ Y KC E AK +F G+
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++ V+W +++ VQ E +F + + ++P + S+L ACA ++ L+LG+
Sbjct: 391 QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK 450
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
S+H VKA ++ ++ G+ALV MY KCG A FN+M R++V WN++I GYA G
Sbjct: 451 SIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
A+ F + +R A+ P+ T+V V+ AC+ +++G I + + +K G +
Sbjct: 511 DPYNAIDMFYK---LRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDC 566
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++D+ + G + A + + W ++ A
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA + SG H + ++YS D A +FD P + WN+ I
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A++ + + G EPD TF L AC+ LQ G HG + R G + +V +
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
GLVD Y K ++ A+ VFD + ++ V+W +M+ Q+ + F + + GVEP
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++ +++ +EL RS+H + + + V + L+D+Y KCG + A F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++M +++ V W ++ GYAH G L F++M N V+ V A +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI--NKVSAVSAFLAAAETID 344
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+EKG +I + L+ I ++ + + G ++A ++ + R ++ W A++
Sbjct: 345 LEKGKEI-HGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA-WSAII 402
Query: 391 NACRVYGKPE 400
A G PE
Sbjct: 403 AALVQTGYPE 412
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 23/296 (7%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S C L Q+H ++ SGF + S+ + L++ Y ++ LA+ VFD + + + W
Sbjct: 40 SSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWN 98
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + +M+ +G+EP + + VL AC L+ G H +
Sbjct: 99 SMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRR 158
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E ++F+G+ LVDMY K G ++ A F+KMP+R++V WNA+I G + A+ F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYACVV 358
M + E P+ V+L+ + + +E I + + G ++
Sbjct: 219 RSMQLVGVE--PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG------LI 270
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL-----NACRV-----YGKPELGRI 404
DL + G VD A + +M + +S WG ++ N C V + K +LG +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 368/608 (60%), Gaps = 24/608 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ I + F P + KA S + + GK++H ++K+G + DVFV + MYS+ G
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159
Query: 61 KDDADKMFDEMPERNLATWN----AYIS-------------NAVLGGRPK-NAIDA---- 98
A +FD+M ER++ +W+ AYI+ A++ G + N ++
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERL 219
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
F+ + P+ IT + + +C +QLG++LH +++R+GF ++++ LVD YGK
Sbjct: 220 FVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGK 279
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
C E+ A+ +FD + +K+ ++W +M+ Y Q + Q+F+ R GV P + + S+
Sbjct: 280 CGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSL 339
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
LS CA L++G+ HA K VE ++ + +AL+DMY KCG I A+ F++ +R++
Sbjct: 340 LSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
WN ++ GY G+ + AL F EM ++ + PN +T + L ACS AG V +G +F
Sbjct: 400 CTWNVMMAGYGMHGYGEKALKLFTEMETLGVK--PNDITFIGALHACSHAGLVVEGKGLF 457
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
M +G+ P EHY C+VDLLGRAGL+D AY++I+ MP+ P I++WGA+L AC+++
Sbjct: 458 EKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKN 517
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
+G +AA L L+P + G VL+SN++AA RW + +RK +KD GIKK G S I
Sbjct: 518 SNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIE 577
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V +H F+ DT+H +I ML ++ +++K AGY+PDT+ L++++EEEK T + +H
Sbjct: 578 VNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYH 637
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+AFGLI+ PG PIR+ KNLRIC DCH+ K +S I R +IVRD NRFH F +G
Sbjct: 638 SEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREG 697
Query: 579 YCSCSDYW 586
CSC YW
Sbjct: 698 SCSCGGYW 705
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 176/359 (49%), Gaps = 30/359 (8%)
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
+S + P+ A++ + +R+ E D + L ACS S+ ++G+++HGF V++G
Sbjct: 81 VSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGL 140
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY----------- 191
+V V N L+ Y +C + A+++FD + +++ VSW +M+ Y+ +
Sbjct: 141 VSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSW 200
Query: 192 -----------EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ E G ++F+ E V P D + S++ +C + ++LG+ +HA ++
Sbjct: 201 TAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR 260
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + +ALVDMYGKCG I+ A F+ M ++++ W A+I YA D A
Sbjct: 261 NGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA--- 317
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ MR V PN +T+V +LS C+ GA++ G K F++ K G++ ++D
Sbjct: 318 FQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALID 376
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV--YGKPELGRIAADNLFKLDPND 416
+ + G + A + E R I W ++ + YG+ L + PND
Sbjct: 377 MYAKCGDISGAQRLFSEAIDR-DICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPND 434
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/649 (38%), Positives = 360/649 (55%), Gaps = 72/649 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ P LFK + L GKQ+H +A SG D FV S F MY + G DA K+
Sbjct: 114 PDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKV 173
Query: 68 FDEMPER-----------------------------------NLATWNAYISNAVLGGRP 92
FD M E+ N+ +WN +S G
Sbjct: 174 FDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYH 233
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
K A+ F + G PD +T + L + D L +GRQ+HG++++ G + V + +
Sbjct: 234 KEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAM 293
Query: 153 VDFYGKCNEVGLAKVVFD--------------------GIIDK---------------ND 177
+D YGK V +FD G++DK N
Sbjct: 294 LDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNV 353
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW S++ QN ++ ++F + GV+P I S+L AC IA L GRS H
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
AV+ + ++ VGSAL+DMY KCG I+ ++I FN MP +NLVCWN+++ GY+ G A
Sbjct: 414 AVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEV 473
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+S FE + MR P++++ +LSAC + G ++G K F M+ +YGIKP EHY+C+
Sbjct: 474 MSIFESL--MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCM 531
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
V+LLGRAG + AY++IKE+P P VWGALLN+CR+ +L IAA LF L+P +
Sbjct: 532 VNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENP 591
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VL+SN++AA G W E D +R +M+ +G+KK GCSWI VKN+++ A D SH +
Sbjct: 592 GTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQID 651
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I + ++ EEM+ +G+ P+ +FAL DVEE+E+ + HSEK+A+ FGL+ P G P+
Sbjct: 652 QITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++ KNLRICGDCH+ KFIS GRE+ +RD NRFH F DG CSC D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 170/441 (38%), Gaps = 76/441 (17%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q HA LKSG +D ++ YS +DAD + +P+ + ++++ I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+I F + G PD C++ S + G+Q+H SG D + V
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML------------VVYVQNYEEENGCQ 198
L Y +C +G A+ VFD + +K DV CS L VV + + E++G +
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEK-DVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214
Query: 199 ------------------------MFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
MF G P +SSVL + L +GR +
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-------------------- 274
H +K + + V SA++DMYGK G + F++
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334
Query: 275 ---------------ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
E N+V W +II G A G AL F EM + PN VT+
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNRVTIP 392
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+L AC A+ G + + ++ + + ++D+ + G + + + MP
Sbjct: 393 SMLPACGNIAALGHG-RSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451
Query: 380 RPTISVWGALLNACRVYGKPE 400
+ + W +L+N ++GK +
Sbjct: 452 K-NLVCWNSLMNGYSMHGKAK 471
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN T P + A + G+ H A++ + DV VG + DMY+K G
Sbjct: 379 MQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGR 438
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +F+ MP +NL WN+ ++ + G+ K + F +L RT +PD I+F + L+A
Sbjct: 439 IKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 121 CSDCSLLQLG 130
C L G
Sbjct: 499 CGQVGLTDEG 508
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/590 (41%), Positives = 357/590 (60%), Gaps = 7/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P++F + ++L + G+Q H +K G DV V + +Y++T
Sbjct: 195 MRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSR 254
Query: 61 KDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ K+F M ER+ +WN I A G AI+ F+ + R G P+ +TF L
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 314
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
S S +L Q+H +++ + ++ N L+ YGK E+ + +F + ++ D V
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEV 374
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+ Y+ N + + G F ++VLSACA +A LE G VHA A
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++AC+E ++ +GSALVDMY KCG I A FN MP RNL WN++I GYA GH D AL
Sbjct: 435 IRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNAL 494
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M +P+++T V VLSACS G V++G + F SMT YG+ P EHY+C+V
Sbjct: 495 RLFTRMK--LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMV 552
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYG-KPELGRIAADNLFKLDPND 416
DLLGRAG +D+ I +MP++P I +W +L AC R G K ELGR AA+ LF +DP +
Sbjct: 553 DLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 612
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLLSNM+A+ G+WE+ R+ M++ +KK AGCSW+++K+ +H+F A D SH
Sbjct: 613 AVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEK 672
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
I A L +L ++++ AGY+P FALYD+E E K + +HSEK+A+AF ++ G+P
Sbjct: 673 GLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLP 731
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+CGDCHSAFK+IS +V R +++RD+NRFH F DG CSC DYW
Sbjct: 732 IRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 188/363 (51%), Gaps = 6/363 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
H LK G D+F+ + ++Y + G A K+FDEMP+RN TW IS G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL-GRQLHGFLVRSGF-DGNVSVC 149
P++A + G P+ F + + AC + L + GRQ+HG+ +R+G D V+V
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
NGL++ Y KC ++ A+ VF ++DK+ VSW SM+ QN E+ + + + R+ G+
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P +F + S LS+CA + + LG+ H +K ++ ++ V + L+ +Y + + + +
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHA-DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M ER+ V WN +IG A G + A+ F EM MR PN VT + +L+ S
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEM--MRAGWSPNRVTFINLLATVSSL 319
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+ +I +++ LKY +K ++ G++G ++ EI M R W +
Sbjct: 320 STSKLSHQI-HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNS 378
Query: 389 LLN 391
+++
Sbjct: 379 MIS 381
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 347/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I FTF + ++ + + G Q+HAL L+S + +VFV S D YSK
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD ++FDEMPER+ ++N I+ + F +++ G + ++ + L+
Sbjct: 287 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +G+Q+H LV G + N L+D Y KC + AK F +K+ +SW
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ YVQN + E Q+F RR G+ P SS++ A + +A + LGR +H+ ++
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++F GS LVDMY KCG + +A F++MPERN + WNA+I YAH G A A+
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + C P+ VT + VL+ACS G ++ MK F+ M +Y I P EHYACV+D
Sbjct: 527 FEGM--LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G + +++ EMP + +W ++L++CR++G EL R+AAD LF ++P D+ +
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPY 644
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSN++A G+WE+A V+K M+D G++K +G SW+ +K +I+ F + D + EI+
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIK 704
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L +EM GY PD AL+ V+ E K+ + +HSE++A+AF L+ P G PIRI
Sbjct: 705 DELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIM 764
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNL C DCH+ K IS IV R++IVRD+ RFH F DG CSC DYW
Sbjct: 765 KNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 5/388 (1%)
Query: 14 PCLFKASSALHIP-VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
P ++ L++P T LH A+K G VFV + D Y K GL A ++F EM
Sbjct: 138 PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+++ T+NA + G A+ F +RR G TF + L + + L LG Q
Sbjct: 198 DKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQ 257
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H ++RS NV V N L+DFY KC+ + + +FD + ++++VS+ ++ Y N
Sbjct: 258 VHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 317
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
++F ++ G + + +++LS + + +G+ +HA V + +G+A
Sbjct: 318 AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA 377
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMY KCG + A+ F+ E++ + W A+I GY G + AL F +M R
Sbjct: 378 LIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR--RAGLR 435
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ T ++ A S + G ++ +S ++ G K + +VD+ + G +D A
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQL-HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALR 494
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPE 400
EMP R +IS W A+++A YG+ +
Sbjct: 495 TFDEMPERNSIS-WNAVISAYAHYGEAK 521
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
YS +G A +F P RN TW + GR +A+ F + G PD +T
Sbjct: 84 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
LN C++ LH F ++ G D +V VCN L+D Y K + A+ VF + D
Sbjct: 144 TTVLN-LPGCTV----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD 198
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ V++ +M++ + Q+F RR G+ F SS+L+ A +A L LG V
Sbjct: 199 KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV 258
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+ +++ N+FV ++L+D Y KC + D F++MPER+ V +N II YA A
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA 318
Query: 295 DMALSSFEEMTSMRCE-AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
L F EM + + V Y T+ LS V G +I + L G+
Sbjct: 319 ATVLRLFREMQKLGFDRQVLPYATM---LSVAGSLPDVHIGKQIHAQLVL-LGLASEDLL 374
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G++D A + IS W AL+ G+ E
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAIS-WTALITGYVQNGQHE 420
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 125 SLLQLGRQLHGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
SLL G H R+ FD N+ N ++ Y ++ A+ +F +N +W
Sbjct: 52 SLLSSG---HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 108
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + + +F EGV P +++VL+ + G + S+H A+K
Sbjct: 109 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVP-SLHPFAIK 163
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++FV + L+D Y K G + A F +M +++ V +NA++ G + +G AL
Sbjct: 164 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQL 223
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +MR +P + T +L+ + + G ++ +++ L+ ++D
Sbjct: 224 F---AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV-HALVLRSTSVLNVFVNNSLLD 279
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTIS 384
+ +D + EMP R +S
Sbjct: 280 FYSKCDCLDDMRRLFDEMPERDNVS 304
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 9/152 (5%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
NIF + ++ Y G + A+ F P RN W ++ +A G ALS F M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+P+ VT+ VL+ G + F +K+G+ ++D + G
Sbjct: 133 GE--GVIPDRVTVTTVLNL---PGCTVPSLHPF---AIKFGLDTHVFVCNTLLDAYCKHG 184
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
L+ A + EM + ++ + A++ C G
Sbjct: 185 LLAAARRVFLEMHDKDAVT-YNAMMMGCSKEG 215
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 347/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I FTF + ++ + + G Q+HAL L+S + +VFV S D YSK
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD ++FDEMPER+ ++N I+ + F +++ G + ++ + L+
Sbjct: 287 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +G+Q+H LV G + N L+D Y KC + AK F +K+ +SW
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ YVQN + E Q+F RR G+ P SS++ A + +A + LGR +H+ ++
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++F GS LVDMY KCG + +A F++MPERN + WNA+I YAH G A A+
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + C P+ VT + VL+ACS G ++ MK F+ M +Y I P EHYACV+D
Sbjct: 527 FEGM--LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G + +++ EMP + +W ++L++CR++G EL R+AAD LF ++P D+ +
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPY 644
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSN++A G+WE+A V+K M+D G++K +G SW+ +K +I+ F + D + EI+
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIK 704
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L +EM GY PD AL+ V+ E K+ + +HSE++A+AF L+ P G PIRI
Sbjct: 705 DELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIM 764
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNL C DCH+ K IS IV R++IVRD+ RFH F DG CSC DYW
Sbjct: 765 KNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 5/387 (1%)
Query: 13 FPCLFKASSALHIP-VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
P ++ L++P T LH A+K G VFV + D Y K GL A ++F EM
Sbjct: 137 IPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 196
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+++ T+NA + G A+ F +RR G TF + L + + L LG
Sbjct: 197 HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGH 256
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q+H ++RS NV V N L+DFY KC+ + + +FD + ++++VS+ ++ Y N
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQ 316
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
++F ++ G + + +++LS + + +G+ +HA V + +G+
Sbjct: 317 CAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGN 376
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
AL+DMY KCG + A+ F+ E++ + W A+I GY G + AL F +M R
Sbjct: 377 ALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR--RAGL 434
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ T ++ A S + G ++ +S ++ G K + +VD+ + G +D A
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQL-HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGK 398
EMP R +IS W A+++A YG+
Sbjct: 494 RTFDEMPERNSIS-WNAVISAYAHYGE 519
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
YS +G A +F P RN TW + GR +A+ F + G PD +T
Sbjct: 84 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
LN C++ LH F ++ G D +V VCN L+D Y K + A+ VF + D
Sbjct: 144 TTVLN-LPGCTV----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD 198
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ V++ +M++ + Q+F RR G+ F SS+L+ A +A L LG V
Sbjct: 199 KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV 258
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+ +++ N+FV ++L+D Y KC + D F++MPER+ V +N II YA A
Sbjct: 259 HALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA 318
Query: 295 DMALSSFEEMTSMRCE-AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
L F EM + + V Y T+ LS V G +I + L G+
Sbjct: 319 ATVLRLFREMQKLGFDRQVLPYATM---LSVAGSLPDVHIGKQIHAQLVL-LGLASEDLL 374
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G++D A + IS W AL+ G+ E
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAIS-WTALITGYVQNGQHE 420
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 125 SLLQLGRQLHGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
SLL G H R+ FD N+ N ++ Y ++ A+ +F +N +W
Sbjct: 52 SLLSSG---HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 108
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + + +F EGV P +++VL+ + G + S+H A+K
Sbjct: 109 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVP-SLHPFAIK 163
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++FV + L+D Y K G + A F +M +++ V +NA++ G + +G AL
Sbjct: 164 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQL 223
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +MR +P + T +L+ + + G ++ +++ L+ ++D
Sbjct: 224 F---AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQV-HALVLRSTSVLNVFVNNSLLD 279
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTIS 384
+ +D + EMP R +S
Sbjct: 280 FYSKCDCLDDMRRLFDEMPERDNVS 304
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
NIF + ++ Y G + A+ F P RN W ++ +A G ALS F M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM- 131
Query: 306 SMRCEAVPNYVTLVCVLS--ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ +P+ VT+ VL+ C+ + + +K+G+ ++D +
Sbjct: 132 -LGEGVIPDRVTVTTVLNLPGCT--------VPSLHPFAIKFGLDTHVFVCNTLLDAYCK 182
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
GL+ A + EM + ++ + A++ C G
Sbjct: 183 HGLLAAARRVFLEMHDKDAVT-YNAMMMGCSKEG 215
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/651 (38%), Positives = 357/651 (54%), Gaps = 72/651 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMY---------- 55
+ P++ P KA + L +Q+H +A SG D FV S MY
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH 169
Query: 56 ---------------------SKTGLKDDADKMFDEMPER----NLATWNAYISNAVLGG 90
++ G D+A ++F EM + NL +WN I+ G
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A+ F+++ G EPD T + L A D L +G +HG++++ G + V +
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289
Query: 151 GLVDFYGKCNEVGLAKVVFDGI-----------------------------------IDK 175
L+D YGKC+ VFD + ++
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VSW SM+ QN + ++F + GV+P I +L AC IA L G++ H
Sbjct: 350 NVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH 409
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+++ + +++VGSAL+DMY KCG IQ + I F+ +P +NLVCWNA+I GYA G A
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAK 469
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ F+ M R P+ ++ CVLSACS++G E+G F SM+ KYGI+ EHYA
Sbjct: 470 EAMEIFDLMQ--RSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+V LL RAG +++AY +I+ MP+ P VWGALL++CRV+ LG +AA+ LF+L+P+
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+ GN++LLSN++A+ G W E + VR MK+ G++K GCSWI VKN++H+ A D SH +
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
T+I L KL EMK GY P+ NF L DVEE++K + HSEK+A+ FGL+ PPG
Sbjct: 648 MTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGY 707
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P+++ KNLRICGDCH KFIS RE+ VRD NRFH F +G CSC DYW
Sbjct: 708 PLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 41/385 (10%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F CL +++L +Q HA LK+G +D + Y+ DA + D +P
Sbjct: 19 FNCLNSTTASLS---QTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVP 75
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
E N+ +++ I + +A+ F + G PD + + AC+ S L+ RQ
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN-- 190
+HG SGFD + V + LV Y KCN++ A VFD + + + VSW +++ Y +
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 191 -------YEE--ENGCQ------------------------MFLTARREGVEPKDFMISS 217
+ E ++G Q MFL G EP ISS
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
VL A + L +G +H +K + + V SAL+DMYGKC + F++M +
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ NA I G + G + +L F ++ E N V+ +++ CS+ G + +++
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL--NVVSWTSMIACCSQNGRDIEALEL 373
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLG 362
F M + G+KP + C++ G
Sbjct: 374 FREMQIA-GVKPNSVTIPCLLPACG 397
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 177/383 (46%), Gaps = 25/383 (6%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S + L RQ H ++++G + + L+ Y A +V D + + N S+
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ + + ++ + F G+ P + ++ S + ACA ++ L+ R VH +A +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + FV S+LV MY KC I+DA F++M E ++V W+A++ YA QG D A F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + PN ++ +++ + +G + + +F M L+ G +P + V+ +
Sbjct: 204 SEMGDSGVQ--PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEPDGTTISSVLPAV 260
Query: 362 GR-----AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
G G++ Y I + + +S AL++ +YGK + ++D D
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVS--SALID---MYGKCSCTSEMSQVFDQMDHMD 315
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G+ + G+ E + + +++KD G++ SW S+ +
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNV-VSWTSMIA---------CCSQNG 365
Query: 477 TEIQAMLTKLREEMKAAGYIPDT 499
+I+A+ +L EM+ AG P++
Sbjct: 366 RDIEAL--ELFREMQIAGVKPNS 386
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/656 (39%), Positives = 350/656 (53%), Gaps = 75/656 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R P+ P K+ A + + LHA A+ SG D FV S Y + G
Sbjct: 11 LRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIRLGA 67
Query: 61 KDDADKMFDEMPERNLA-----------------------------------TWNAYISN 85
A +FD MPE+N+ TWN +S
Sbjct: 68 TGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
GR +A+ A + + G PD L+A D + +G+Q+HG++V++G +
Sbjct: 128 LNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLD 187
Query: 146 VSVCNGLVDFYGKCN-------------------------------EVGLAKVVFDGII- 173
V L+D YGKC +V A ++F I
Sbjct: 188 ACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFIC 247
Query: 174 ---DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ N VSW S++ VQN + +F T + GVEP I VL A A +A L
Sbjct: 248 RGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMH 307
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
GRS H +++ +++VGSALVDMY KCG + A F+ MP RN+V WNA+IGGYA
Sbjct: 308 GRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAM 367
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G A A+ F M +C+ P+ VT CVL ACS+AG E+G + F M +GI P
Sbjct: 368 HGDAANAVQLFCSMQ--KCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPR 425
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHYAC+V LLGR+G +D AY++I EMP P +WG+LL +CRVYG L +AA+ LF
Sbjct: 426 MEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLF 485
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+L+P ++GN+VLLSN++A+ W+ + VR EMK++G+KK GCSWI +KN++H+ A D
Sbjct: 486 QLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGD 545
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH T I L +L EM G+ P +F L+DVEE+EK + HSEK+A+A GLI+
Sbjct: 546 NSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLIS 605
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG P+R+ KNLRICGDCH A KFIS RE+ VRD NRFH F DG CSC DYW
Sbjct: 606 TRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 351/582 (60%), Gaps = 5/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN TF + A S G+Q+H +K+G I D V + MY+K G DA
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ + ++N+ WNA I+ V + NA+ F L + G +PD TF + LN C
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG+ + ++R+GF+ ++ + N LV + C ++ A +F+ + +++ VSW +++
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+VQ+ E + F + GV+P + +L+ACA L GR +HA+ +A ++
Sbjct: 583 GFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDC 642
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ VG+ L+ MY KCGSI DA + F+ +P++N+ W ++I GYA G AL F
Sbjct: 643 DVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELF---C 699
Query: 306 SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M+ E V P+++T V LSAC+ AG +++G+ F SM + I+P EHY C+VDL GRA
Sbjct: 700 QMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRA 758
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GL+ A E I +M ++P +WGALL AC+V+ EL A +LDPND G +V+LS
Sbjct: 759 GLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILS 818
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++AA G W+E +RK M D G+ K G SWI V R+HIF + D +H + EI A L
Sbjct: 819 NIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELG 878
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L EMK GY+PDT + L+DVE+ EK + HHSE++A+A+GL+ PP PI I+KNLR
Sbjct: 879 RLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLR 938
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A K IS I R++I RD+NRFH F DG CSC D+W
Sbjct: 939 VCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 208/398 (52%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ F L KA + GK++HA + G +++VG + MY+K G
Sbjct: 297 MEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGS 356
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F+ + RN+ +W A I+ GR + A F + +G EP+ +TF + L A
Sbjct: 357 MEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGA 416
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS S L+ GRQ+H ++++G+ + V L+ Y KC + A+ VF+ I +N V+W
Sbjct: 417 CSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAW 476
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YVQ+ + +N F +EG++P +S+L+ C LELG+ V ++ ++
Sbjct: 477 NAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A E ++ + +ALV M+ CG + A FN MPER+LV WN II G+ G A
Sbjct: 537 AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDY 596
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M + P+ +T +L+AC+ A+ +G ++ +++ + + ++ +
Sbjct: 597 FKMMQESGVK--PDQITFTGLLNACASPEALTEGRRL-HALITEAALDCDVVVGTGLISM 653
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G +D A+ + +P + S W +++ +G+
Sbjct: 654 YTKCGSIDDAHLVFHNLPKKNVYS-WTSMITGYAQHGR 690
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 199/402 (49%), Gaps = 4/402 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ + P+ +TF + A + G +L +L L +G D+FVG + +M+ K G
Sbjct: 196 MVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGG 255
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+F+ +P R+L TW + I+ + K A + F + G +PD + F + L A
Sbjct: 256 VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKA 315
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+++H + G D + V L+ Y KC + A VF+ + +N VSW
Sbjct: 316 CNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSW 375
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + Q+ E F G+EP S+L AC+R + L+ GR +H +K
Sbjct: 376 TAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + V +AL+ MY KCGS+ DA F ++ ++N+V WNA+I Y D A+++
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVAT 495
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + ++ P+ T +L+ C A+E G K S+ ++ G + +V +
Sbjct: 496 FQAL--LKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSM 552
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
G + A + +MP R +S W ++ +G+ +
Sbjct: 553 FVNCGDLMSAMNLFNDMPERDLVS-WNTIIAGFVQHGENQFA 593
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 208/418 (49%), Gaps = 10/418 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H S D+F+ MY+K G + A ++FDEMP++++ +WN + V
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R + A + + G +PD TF LNAC+D + G +L ++ +G+D ++ V
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L++ + KC V A VF+ + ++ ++W SM+ ++ + + C +F EGV
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P S+L AC LE G+ VHA + ++ I+VG+AL+ MY KCGS++DA
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN + RN+V W A+I G+A G + A F +M E PN VT + +L ACSR
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE--PNRVTFMSILGACSRP 420
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+++G +I + +K G ++ + + G + A + + + + + W A
Sbjct: 421 SALKQGRQI-HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNA 478
Query: 389 LLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLL----SNMFAATGRWEEADLVR 440
++ A + K + L K + P+ S +L S G+W ++ ++R
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 170/355 (47%), Gaps = 11/355 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ +E I P+ TF + + GK + +L +++G D+ + + M+ G
Sbjct: 499 LLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGD 558
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F++MPER+L +WN I+ V G + A D F ++ +G +PD ITF LNA
Sbjct: 559 LMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNA 618
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L GR+LH + + D +V V GL+ Y KC + A +VF + KN SW
Sbjct: 619 CASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSW 678
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y Q+ + ++F ++EGV+P LSACA ++ G
Sbjct: 679 TSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD 738
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM---PERNLVCWNAIIGGYAHQGHADMA 297
+E + +VD++G+ G + +A NKM P+ L W A++G A Q H D+
Sbjct: 739 FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRL--WGALLG--ACQVHLDVE 794
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPG 350
L+ E++ + E PN + +LS A + K + + L G+ KPG
Sbjct: 795 LA--EKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPG 847
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 166/344 (48%), Gaps = 6/344 (1%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
+N NA+++ G+ A+ +++ + T+ + L C L G ++
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H + S ++ + N L+ Y KC AK +FD + DK+ SW +L YVQ+
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
E ++ ++GV+P + +L+ACA ++ G + ++ + A + ++FVG+AL
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
++M+ KCG + DA FN +P R+L+ W ++I G A A + F+ M + P
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ--P 304
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ V V +L AC+ A+E+G ++ M + G+ ++ + + G ++ A E+
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPN 415
+ R +S W A++ +G+ E + + + + ++PN
Sbjct: 364 FNLVKGRNVVS-WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/585 (40%), Positives = 352/585 (60%), Gaps = 3/585 (0%)
Query: 3 RECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R + P+ FT + +A S+L G+Q+H ALK+G + D FV + D+YSK G
Sbjct: 391 RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKM 450
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
++A+ +F +LA+WNA + + + A+ F + G + D ITF A
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAA 510
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
LQ G+Q+H +++ F ++ V +G++D Y KC E+ A+ VF+ I +DV+W
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ V+N EEE + R GV+P ++ ++++ AC+ + LE G+ +HA +K
Sbjct: 571 TVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKL 630
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ FV ++LVDMY KCG+I+DA F +M R++ WNA+I G A G+A+ AL+ F
Sbjct: 631 NCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFF 690
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM S P+ VT + VLSACS +G K F SM YG++P EHY+C+VD L
Sbjct: 691 NEMKSR--GVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDAL 748
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
RAG + A +++ MP + +++ LLNACRV G E G A+ LF +DP+DS +V
Sbjct: 749 SRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYV 808
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN++AA +WE A R MK V +KK G SWI +KN++H+F A D SHE I
Sbjct: 809 LLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYN 868
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ + + +K GY+PDT FAL D+EEE+K + + +HSEK+A+A+GL+ PP +R+ K
Sbjct: 869 KVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIK 928
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+CGDCH+A K+IS + RE+++RD NRFH F G CSC DYW
Sbjct: 929 NLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 13/397 (3%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ T+ + ++L+ GKQ+H ++ G V V SA +MY K G + A +MF
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+M E +L +WN IS G + ++ FI+L R+G PD T + L ACS SL +
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS--SLEE 413
Query: 129 ---LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+GRQ+H +++G + V L+D Y K ++ A+++F + SW +M+
Sbjct: 414 SYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMH 473
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ + ++F G + ++ A + L+ G+ +HAV +K
Sbjct: 474 GFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHY 533
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV S ++DMY KCG ++ A FN++P + V W +I G G + AL ++ +
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQ-- 591
Query: 306 SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYS-MTLKYGIKPGAEHYACVVDLLGR 363
MR V P+ T ++ ACS A+E+G +I + M L P +VD+ +
Sbjct: 592 -MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAK 648
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G ++ AY + + M R ++++W A++ +G E
Sbjct: 649 CGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAE 684
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 173/338 (51%), Gaps = 5/338 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+F + ++ WN +S+ + G A+D F ++ ++ D +T+ L+ +
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L+LG+Q+HG +VR G+D VSV N ++ Y K V A+ +F + + + +SW ++
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVAVKAC 242
+ ++ EE ++F+ R G+ P F I+SVL AC+ + +GR VH A+KA
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + FV +AL+D+Y K G +++AE+ F+ +L WNA++ G+ + AL F
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M +A + +T A +++G +I +++ +K + ++D+
Sbjct: 490 LMHERGEKA--DQITFANAAKAAGCLVRLQQGKQI-HAVVIKMRFHYDLFVISGILDMYL 546
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G + A ++ ++P P W +++ C G+ E
Sbjct: 547 KCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEE 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI- 172
F +A +D L+ LG++ H +V SG + + V N L+ Y KC + A+ +FD
Sbjct: 17 FSILRHAIADSDLI-LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITP 75
Query: 173 -IDKNDVSWCSMLVVYVQNYE------EENGCQMFLTARREGVEPKDFMISSVLSACARI 225
D++ V++ ++L Y E +F R+ + +S + C
Sbjct: 76 QSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLY 135
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
++ AVK ++ ++FV ALV++Y K I++A + F++MP R++V WN ++
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
Y G D L F R P+ V++ +L + E+ ++
Sbjct: 196 KAYVEMGAGDEVLGLFSAF--HRSGLRPDCVSVRTILMGVGKKTVFERELE 244
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 187/466 (40%), Gaps = 52/466 (11%)
Query: 1 MRREC-ISPNDF--TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M R+C +SP+ + + + + A + GK+ HA+ + SG D +V + MY+K
Sbjct: 1 MSRKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK 60
Query: 58 TGLKDDADKMFDEMPE--RNLATWNAYISNAVLGG------RPKNAIDAFINLRRTGGEP 109
G A K+FD P+ R+L T+NA ++ G + A F LR++
Sbjct: 61 CGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLT 120
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
T C L G+ V+ G +V V LV+ Y K + A+V+F
Sbjct: 121 TRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + ++ V W M+ YV+ + +F R G+ P + ++L + E
Sbjct: 181 DRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE 240
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
R + V A +FV C D + WN + Y
Sbjct: 241 --RELEQVRAYAT---KLFV----------CDDDSDVTV------------WNKTLSSYL 273
Query: 290 HQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
G A+ F +M R VP + +T + +LS + +E G +I + +++G
Sbjct: 274 QAGEGWEAVDCFRDMIKSR---VPCDSLTYIVILSVVASLNHLELGKQI-HGAVVRFGWD 329
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
+++ +AG V+ A + +M IS W +++ C G E +
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS-WNTVISGCARSGLEE----CSLR 384
Query: 409 LFKLDPNDSG---NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
LF +D SG + ++++ A EE+ V +++ +K G
Sbjct: 385 LF-IDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+++TF L KA S L GKQ+HA +K D FV S DMY+K G
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F M R++A WNA I G + A++ F ++ G PD +TF L+A
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711
Query: 121 CSDCSL 126
CS L
Sbjct: 712 CSHSGL 717
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/660 (38%), Positives = 356/660 (53%), Gaps = 79/660 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R P+ P FK+ L + + LHA+A SG D FV S Y + G
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 61 KDDADKMFDEMP--------------------------------------ERNLATWNAY 82
+A +FD MP E N+ TWN
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
+S GR ++A+ A + G PD L+A D L+ +G+QLHG+ V++G
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAG 187
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFD---------------GI-------------- 172
+ V L+D YGKC + VFD G+
Sbjct: 188 CRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFK 247
Query: 173 ------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
++ N VSW S++ VQN ++ + F + +G EP I VL A A +A
Sbjct: 248 EFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVA 307
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L GRS H A++ +++V SALVDMY KCG ++DA I F+ M RN+V WNA+IG
Sbjct: 308 ALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIG 367
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
GYA G A A+ F M ++C+ P+ VT C+L+AC++AG E+G F M +YG
Sbjct: 368 GYAMYGEAVNAVWMFHSM--LKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYG 425
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
+ P EHYAC+V LLGRAG +D AY++I +MP P +WG+LL +CRV+G +L +AA
Sbjct: 426 VSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAA 485
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
+ LF L+P ++GN+VLLSN++A+ W+ + VR+ MKDVG+KK GCSWI +KN++H+
Sbjct: 486 EKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHML 545
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D SH T I + +L +M+ G++P T+F L+DVEE+EK + HSEK+A+A
Sbjct: 546 LAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVAL 605
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GLI+ PG +R+ KNLRICGDCH A KFIS GRE+ VRD NRFH F G CSC D+W
Sbjct: 606 GLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/590 (40%), Positives = 358/590 (60%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M+RE + PN T+ L A +ALH G+++H+ +K G + D+ V + MY++
Sbjct: 437 MQREGMMPNKITYVILLNACVNPTALH---WGREIHSRVVKDGFMFDISVQNALISMYAR 493
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G DA +F++M +++ +W A I G A+ F ++++ G +P+ +T+ +
Sbjct: 494 CGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSI 553
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LNACS + L GR++H ++ +G + V N LV+ Y C V A+ VFD + ++
Sbjct: 554 LNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V++ +M+ Y + + ++F + EG++P ++L+ACA LE + +H++
Sbjct: 614 VAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSL 673
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K + +G+ALV Y KCGS DA + F+KM +RN++ WNAIIGG A G
Sbjct: 674 VLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDV 733
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L FE M + E + P+ VT V +LSACS AG +E+G + F SM+ +GI P EHY C
Sbjct: 734 LQLFERM---KMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG +D +IK MP + +WGALL ACR++G + AA++ KLDP++
Sbjct: 791 MVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDN 850
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ +V LS+M+AA G W+ A +RK M+ G+ K G SWI V +++H F A+D SH +
Sbjct: 851 AAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPES 910
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+I A L KL MK GY+PDT ++DV+E EK V HHSE++A+A+GLI+ PG P
Sbjct: 911 EKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTP 970
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+C DCH+A KFI+ IV RE++ RD NRFH F DG CSC DYW
Sbjct: 971 IRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 214/400 (53%), Gaps = 4/400 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + PN T+ + A S GK +H+ L +G D+ VG + MY+K G
Sbjct: 336 MQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGS 395
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++F+++ R+L WN I GG + A + + ++R G P+ IT+ LNA
Sbjct: 396 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNA 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + + L GR++H +V+ GF ++SV N L+ Y +C + A+++F+ ++ K+ +SW
Sbjct: 456 CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISW 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ ++ +F ++ G++P +S+L+AC+ A L+ GR +H ++
Sbjct: 516 TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIE 575
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + + V + LV+MY CGS++DA F++M +R++V +NA+IGGYA AL
Sbjct: 576 AGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKL 635
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + + P+ VT + +L+AC+ +G++E +I +S+ LK G +V
Sbjct: 636 FDRLQEEGLK--PDKVTYINMLNACANSGSLEWAKEI-HSLVLKDGYLSDTSLGNALVST 692
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G A + +M R IS W A++ C +G+ +
Sbjct: 693 YAKCGSFSDALLVFDKMMKRNVIS-WNAIIGGCAQHGRGQ 731
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 221/438 (50%), Gaps = 18/438 (4%)
Query: 18 KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLA 77
K+ SAL G+++H A+K+ + DV V +MY+K G +A ++FD+M +++
Sbjct: 255 KSPSALE---CGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+W I G + A + F +++ G P+ IT+ LNA S + L+ G+ +H +
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
+ +G + +++V LV Y KC + VF+ +++++ ++W +M+ + E
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+++ +REG+ P +L+AC L GR +H+ VK +I V +AL+ MY
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+CGSI+DA + FNKM ++++ W A+IGG A G AL+ F++M + PN VT
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK--PNRVT 549
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+L+ACS A++ G +I + ++ G+ A +V++ G V A ++ M
Sbjct: 550 YTSILNACSSPAALDWGRRI-HQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN----DSGNHVLLSNMFAATGRW 433
R ++ + A++ Y LG+ A +L D ++ + N A +G
Sbjct: 609 TQRDIVA-YNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 434 EEADLVRKEMKDVGIKKG 451
E A KE+ + +K G
Sbjct: 665 EWA----KEIHSLVLKDG 678
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 189/366 (51%), Gaps = 6/366 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM--PERNLATWNAYIS 84
V G+++H ++ + D + + +MY + G ++A ++++++ ER + +WNA +
Sbjct: 158 VAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVV 217
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
V G + A+ +++ G T L++C S L+ GR++H +++
Sbjct: 218 GYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLF 277
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V+V N +++ Y KC + A+ VFD + K+ VSW ++ Y E ++F +
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+EGV P +VL+A + A L+ G++VH+ + A E ++ VG+ALV MY KCGS +
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK 397
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D F K+ R+L+ WN +IGG A G+ + A + +M R +PN +T V +L+A
Sbjct: 398 DCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM--QREGMMPNKITYVILLNA 455
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C A+ G +I +S +K G ++ + R G + A + +M + IS
Sbjct: 456 CVNPTALHWGREI-HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIIS 514
Query: 385 VWGALL 390
W A++
Sbjct: 515 -WTAMI 519
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 172/355 (48%), Gaps = 15/355 (4%)
Query: 45 VFVGCSAFDMYSKTGLK-------DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAID 97
V CS+ M+S++ +K + + F+ + N + Y + G+ + A+D
Sbjct: 70 VEANCSSL-MHSQSRVKFLKRWFNSNGIRYFNGRSKANKLHSHTYKDERTITGKDR-AMD 127
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
L++ G + + L C + L GR++H +++ + N L++ Y
Sbjct: 128 VVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYI 187
Query: 158 KCNEVGLAKVVFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
+C + A+ V++ + ++ SW +M+V YVQ E ++ ++ G+
Sbjct: 188 QCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATT 247
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+LS+C + LE GR +H A+KA + ++ V + +++MY KCGSI +A F+KM
Sbjct: 248 MRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMET 307
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+++V W IIGGYA GH+++A F++M VPN +T + VL+A S A++ G
Sbjct: 308 KSVVSWTIIIGGYADCGHSEIAFEIFQKMQQE--GVVPNRITYINVLNAFSGPAALKWG- 364
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
K +S L G + +V + + G ++ +++ R I+ W ++
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-WNTMI 418
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
+L + V D+M +L C + L GR VH ++ C + + +AL++MY +
Sbjct: 131 YLQQQGARVNSCDYM--KMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQ 188
Query: 260 CGSIQDAEIAFNKM--PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
CGSI++A +NK+ ER + WNA++ GY G+ + AL EM T
Sbjct: 189 CGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL--ALGRAT 246
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ +LS+C A+E G +I + +K + C++++ + G + A E+ +M
Sbjct: 247 TMRLLSSCKSPSALECGREI-HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM 305
Query: 378 PMRPTISVWGALLNACRVYGKPELG 402
+ +S W ++ G E+
Sbjct: 306 ETKSVVS-WTIIIGGYADCGHSEIA 329
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/560 (41%), Positives = 341/560 (60%), Gaps = 4/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
GK +HA +++ + V + DMY+K G A ++F+ + ++ + +W A I+
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
+ R + FI ++ P+ IT + + C LQLG+QLH +++R+GF ++
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
++ LVD YGKC+++ A+ +FD +++ + W +ML Y Q + +F R
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV P I S+LS CA L+LG+ VH+ K VE + + +ALVDMY KCG I A
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F + R++ WNAII G+A G+ + AL F EM R PN +T + +L ACS
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME--RQGVKPNDITFIGLLHACS 511
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG V +G K+F M +G+ P EHY C+VDLLGRAGL+D A+E+IK MP++P VW
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVW 571
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
GAL+ ACR++ P+LG +AA L +++P + G +VL+SN++AA RW +A VRK MK V
Sbjct: 572 GALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTV 631
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G+KK G S I V +H F D SH + I ML ++R ++ AGY+PDT+ L ++
Sbjct: 632 GMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNI 691
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+EEEK T + +HSEK+A+AFGLI+ P PIRI KNLR+C DCH+A K +S I GR +IV
Sbjct: 692 DEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIV 751
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH F +GYCSC DYW
Sbjct: 752 RDRNRFHHFREGYCSCGDYW 771
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 208/412 (50%), Gaps = 10/412 (2%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
+F P + KA + GK++H LK G DVFVG + MY + + A +FD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+M ER++ +W+ I + A++ + P + + +N +D + +++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 130 GRQLHGFLVRSGFDGNVSV--CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+ +H +++R+ + ++ V L+D Y KC +GLA+ +F+G+ K VSW +M+
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+++ E G ++F+ + E + P + + S++ C L+LG+ +HA ++ ++
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ +ALVDMYGKC I++A F+ R+++ W A++ YA D A + F++ M
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ---M 390
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R V P VT+V +LS C+ AGA++ G K +S K ++ +VD+ + G
Sbjct: 391 RTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGD 449
Query: 367 VDRAYEIIKEMPMRPTISVWGALLN--ACRVYGKPELGRIAADNLFKLDPND 416
++ A + E R I +W A++ A YG+ L A + PND
Sbjct: 450 INAAGRLFIEAISRD-ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 500
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 21/241 (8%)
Query: 190 NYEEE-----NGCQMFLTARREGVEPK---DFMISSVLSACARIAGLELGRSVHAVAVKA 241
+Y+EE +G Q L A R G + +FM SVL AC +++ +LG+ +H +K
Sbjct: 65 DYDEEKTHFPDGKQS-LKANRNGDDDDDVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKK 123
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++ ++FVG+AL+ MYG+C ++ A + F+KM ER++V W+ +I + DMAL
Sbjct: 124 GLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELI 183
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDL 360
EM M+ P+ V +V +++ + + G + Y + G ++D+
Sbjct: 184 REMNFMQVR--PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 241
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG-----RIAADNLFKLDPN 415
+ G + A ++ + + +S W A++ C + E G R+ +N+F PN
Sbjct: 242 YAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIRSNRLEEGTKLFIRMQEENIF---PN 297
Query: 416 D 416
+
Sbjct: 298 E 298
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P T L + GK +H+ K D + + DMY+K G
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGD 449
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F E R++ WNA I+ + G + A+D F + R G +P+ ITF L+A
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 509
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G++L +V + G + +VD G+ + A + + I N +
Sbjct: 510 CSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 569
Query: 179 SWCSML 184
W +++
Sbjct: 570 VWGALV 575
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/562 (43%), Positives = 344/562 (61%), Gaps = 7/562 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ G+Q+HA +KSG V + YSKT L + ++F+E ++ TW++ IS+
Sbjct: 71 LKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSF 130
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
P AI F + PD F + AC+ +G+ +H ++++G+D +V
Sbjct: 131 AQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDV 190
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + LVD Y KC ++ A+ VFD + +N VSW M+ Y Q E E ++F A E
Sbjct: 191 FVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLE 250
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G++ DF +SSV+ C LELG+ +H + K + + FVGS+L+ +Y KCG I+ A
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS--MRCEAVPNYVTLVCVLSA 324
F+++P +NL WNA++ A H A F +M + MR PN++T +CVL A
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMR----PNFITFLCVLYA 366
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS AG VE+G K ++++ KY I+PG +HYA +VDLLGRAG + A +IK MP PT S
Sbjct: 367 CSHAGLVEEGKK-YFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTES 425
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VWGA + CR++G +L AAD +F+L SG HV+LSN +AA GR+E+A RK ++
Sbjct: 426 VWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLR 485
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK G SWI NR+H F A D H R EI L L EEM+ AGY+ DT+F L
Sbjct: 486 DRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLR 545
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
+V EEK + +HSE++A+AFGLI+IP G PIRI KNLR+CGDCH+A KFIS + GR +
Sbjct: 546 EVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVI 605
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
IVRDNNRFHRF DG CSC+DYW
Sbjct: 606 IVRDNNRFHRFEDGKCSCADYW 627
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 10/302 (3%)
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
P+N+ + F + ++ G DL+ L+ SLL+ G+Q+H +++SG VC+
Sbjct: 41 PQNSPNRFCSEKKYGHICDLL-----LSQTRSRSLLK-GQQIHAHIIKSGLQVIPLVCHY 94
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L++FY K L+ VF+ K+ +W S++ + QN E Q F E + P
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPD 154
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
D + S ACA + ++G+SVH + +K + ++FVGS+LVDMY KCG I++A F+
Sbjct: 155 DHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFD 214
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+MP RN+V W+ +I GY G + A+ F+E + N TL V+ C A +
Sbjct: 215 EMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDV--NDFTLSSVIRVCGSATLL 272
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
E G +I + + K + ++ L + GL++ AY + E+P++ + +W A+L
Sbjct: 273 ELGKQI-HGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIK-NLGMWNAMLI 330
Query: 392 AC 393
AC
Sbjct: 331 AC 332
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 1/342 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + P+D FP KA + L GK +H L +K+G DVFVG S DMY+K G +
Sbjct: 149 ENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKE 208
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FDEMP RN+ +W+ I G + A+ F G + + T + + C
Sbjct: 209 ARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGS 268
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+LL+LG+Q+HG ++ +D + V + L+ Y KC + A VFD + KN W +M
Sbjct: 269 ATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAM 328
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L+ Q+ + +F G+ P VL AC+ +E G+ A+ K +
Sbjct: 329 LIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEI 388
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
E +++VD+ G+ G +Q+A MP E W A I G G+ D+A + +
Sbjct: 389 EPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAAD 448
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + + +V L +A R K K+ +K
Sbjct: 449 KVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVK 490
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 16/239 (6%)
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
++ Q+ +E + R E K I +L + R L G+ +HA +K+ ++
Sbjct: 27 IIKTQSLSQEGTITPQNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQ 86
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
V L++ Y K + F + ++ W+++I +A +A+ F M
Sbjct: 87 VIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRM 146
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
P+ AC+ G + G K + + +K G + +VD+ +
Sbjct: 147 IGENL--CPDDHIFPSATKACAILGRCDVG-KSVHCLVIKTGYDVDVFVGSSLVDMYAKC 203
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI-AADNLFK------LDPND 416
G + A + EMP R +S W + +YG +LG A LFK LD ND
Sbjct: 204 GDIKEARNVFDEMPHRNVVS-WSGM-----IYGYTQLGEHEEAMRLFKEALLEGLDVND 256
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/612 (39%), Positives = 357/612 (58%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++ N TF + SS G+Q+H K G +FVG DMY+KTG +DA+
Sbjct: 134 VNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDAN 193
Query: 66 KMFDEMPERNLA-------------------------------TWNAYISNAVLGGRPKN 94
++F+E+PE+N+ +W I+ G K
Sbjct: 194 RIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKE 253
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+D F + G D TF + L AC L G+Q+H +++R+ + N+ V + L+D
Sbjct: 254 AVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLD 313
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC V A+ VF + KN +SW +MLV Y QN E ++F +R + P DF
Sbjct: 314 MYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFT 373
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ SV+S+CA +A LE G H A+ + + + V +AL+ +YGKCGS++ A F++M
Sbjct: 374 LGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMK 433
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R+ V W A++ GYA G A+ +S FE M + VP+ VT V VLSACSRAG VEKG
Sbjct: 434 IRDEVSWTALVSGYAQFGKANETISLFETMLAHGI--VPDGVTFVGVLSACSRAGLVEKG 491
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F M ++ I P +HY C++DLL RAG ++ A I +MP P W LL++CR
Sbjct: 492 YHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCR 551
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G E+G+ AA++L KL+P + +++LLS+++AA G+W++ +RK M+++G+KK G
Sbjct: 552 LNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGH 611
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI KN++HIF A D S + +I A L L +M GY+PD +F L+DVE+ EK+
Sbjct: 612 SWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKM 671
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGL+ IP G+ IR+ KNLR+CGDCH+A K+IS I RE++VRD RFH
Sbjct: 672 LNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHL 731
Query: 575 FWDGYCSCSDYW 586
F DG CSC D+W
Sbjct: 732 FKDGVCSCGDFW 743
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 188/388 (48%), Gaps = 38/388 (9%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++F + YSK G D ++FD MP ++ +WN+ +S G ++ + N+
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY-NMM 128
Query: 104 RTGGEPDL--ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--- 158
G +L ITF L S+ + LGRQ+HG + + G+ + V + LVD Y K
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF 188
Query: 159 ----------------------------CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
C + A+ +FD + +K+ +SW +++ QN
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ F EG F SVL+AC L+ G+ +HA ++ + NIFVG
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
SAL+DMY KC +++ AE F KM +N++ W A++ GY G+++ A+ F +M R E
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM--QRNE 366
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ TL V+S+C+ ++E+G + F+ L G+ ++ L G+ G ++ A
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHA 425
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGK 398
+++ EM +R +S W AL++ +GK
Sbjct: 426 HQLFHEMKIRDEVS-WTALVSGYAQFGK 452
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I P+DFT + + + L G Q H AL SG I V V + +Y K G
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGS 421
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F EM R+ +W A +S G+ I F + G PD +TF L+A
Sbjct: 422 LEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481
Query: 121 CSDCSLLQLG 130
CS L++ G
Sbjct: 482 CSRAGLVEKG 491
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 43/246 (17%)
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H ++ F+ + L++ YGK G +++A F+ +P+ NL WN ++ Y+
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 292 GHADMALSSFEEMTS-----------------MRCEAVPNY-------------VTLVCV 321
G+ F+ M + + E+V Y +T +
Sbjct: 85 GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L S G V+ G +I + K+G + + +VD+ + G ++ A I +E+P +
Sbjct: 145 LILSSNRGFVDLGRQI-HGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK- 202
Query: 382 TISVWGALLNA---CRVYGKPELGRIAADNLFKLDP-NDSGNHVLLSNMFAATGRWEEAD 437
I V+ ++ CR + A+ LF P DS + + G ++EA
Sbjct: 203 NIVVYNTMITGLLRCRFI-------VEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAV 255
Query: 438 LVRKEM 443
KEM
Sbjct: 256 DKFKEM 261
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/612 (40%), Positives = 354/612 (57%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + +SAL G+Q+H L+ G F G DMY+K G DA
Sbjct: 141 VRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200
Query: 66 KMFDEM-------------------------------PERNLATWNAYISNAVLGGRPKN 94
++FDEM ER+ TW ++ G
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESE 260
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+D F +R G D TF + L AC + L+ G+Q+H ++ R+ ++ NV V + LVD
Sbjct: 261 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVD 320
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC V LA+ VF ++ KN +SW +M+V Y QN E ++F +R+G++P DF
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFT 380
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ SV+S+CA +A LE G H +A+ + + + V +ALV +YGKCGSI+DA F++M
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ V W A++ GYA G A + FE+M S + P+ VT + VLSACSR+G V+KG
Sbjct: 441 FHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVK--PDGVTFIGVLSACSRSGLVDKG 498
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F+SM + I P +HY C++DL R+G + +A E IK+MP P W LL+ACR
Sbjct: 499 RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACR 558
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G E+G+ AA+NL KLDP + ++VLL +M A+ G W + +R+ M+D +KK GC
Sbjct: 559 LRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGC 618
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI KN++HIF A D SH + I L L +M GY PD + L+DV + EK+
Sbjct: 619 SWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHM 678
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI +PP +PIRI KNLR+C DCH+A KFIS I GR+++VRD RFH+
Sbjct: 679 LSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 738
Query: 575 FWDGYCSCSDYW 586
F +G CSC D+W
Sbjct: 739 FSNGICSCGDFW 750
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 188/390 (48%), Gaps = 37/390 (9%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++ G S ++ GL D +++F +P+R+ ++NA ++ G A A++ L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 104 R--TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG----------------- 144
R G P IT + S LGRQ+H ++R GF
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 145 --------------NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
NV +CN ++ +C V A+ +F+ I +++ ++W +M+ QN
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E +F R EGV + S+L+AC +A LE G+ +HA + C E N+FVG
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
SALVDMY KC S++ AE F +M +N++ W A+I GY G + A+ F EM R
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM--QRDG 373
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ TL V+S+C+ ++E+G + F+ + L G++P +V L G+ G ++ A
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDA 432
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + EM +S W AL+ +GK +
Sbjct: 433 HRLFDEMSFHDQVS-WTALVMGYAQFGKAK 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 3/326 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + + +TF + A AL GKQ+HA ++ +VFVG + DMYSK
Sbjct: 268 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M +N+ +W A I G + A+ F ++R G +PD T + +++
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISS 387
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG V+V N LV YGKC + A +FD + + VSW
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
++++ Y Q + + +F +GV+P VLSAC+R ++ GRS H++
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMAL 298
+ + ++D+Y + G ++ AE +MP + W ++ +G ++
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGK 567
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ E + + + +YV L+C + A
Sbjct: 568 WAAENLLKLDPQNPASYV-LLCSMHA 592
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 360/586 (61%), Gaps = 4/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + N +TFP + A S++ G+Q+H +KSG +V+V + DMY+K G
Sbjct: 256 MHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD 315
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A M + M + ++ +WN+ + V G + A+ F N+ + D TF + LN
Sbjct: 316 LKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C S+ + +HG ++++GF+ V N LVD Y K ++ A VF+ +++K+ +SW
Sbjct: 376 CVVGSINP--KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISW 433
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Y QN E ++F R GV P F+++S+LSACA + LE G+ VH +K
Sbjct: 434 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + V ++LV MY KCG + DA+ F M ++++ W AII GYA G +L
Sbjct: 494 SGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKF 553
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
++ M S P+++T + +L ACS AG V++G K F M YGIKPG EHYAC++DL
Sbjct: 554 YDAMVSSGTR--PDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDL 611
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GR+G +D A +++ +M ++P +VW +LL+ACRV+ EL AA NLF+L+P ++ +
Sbjct: 612 FGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPY 671
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSNM++A+ +W + +RK MK GI K GCSW+ + +R++ F + D H R EI
Sbjct: 672 VMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIY 731
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ ++ +K AGY+PD +F+L+D+++E K + +HSEK+A+AFGL+A PP PIRI
Sbjct: 732 TKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIF 791
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA K+IS + R +I+RD+N FH F +G CSC DYW
Sbjct: 792 KNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 195/393 (49%), Gaps = 10/393 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + FT + + S+L + TG+ +H +K+G +VFV DMY+K
Sbjct: 153 MRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKC 212
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+A+ +F E +N W A ++ G A++ F + G E + TF L
Sbjct: 213 VSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTIL 272
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
ACS G Q+HGF+V+SGF NV V + LVD Y KC ++ AK + + + D + V
Sbjct: 273 TACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVV 332
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW S++V +V++ EE ++F ++ D+ SVL+ C + G +SVH +
Sbjct: 333 SWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLI 390
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K E V +ALVDMY K G + A F KM E++++ W +++ GYA + +L
Sbjct: 391 IKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESL 450
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F MR V P+ + +LSAC+ +E G ++ +K G++ Y +
Sbjct: 451 KIF---CDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF-IKSGLRWSQSVYNSL 506
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V + + G +D A I M ++ I+ W A++
Sbjct: 507 VAMYAKCGCLDDADAIFVSMQVKDVIT-WTAII 538
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 182/377 (48%), Gaps = 47/377 (12%)
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR-------------------- 91
+ SK+G +DA K+FD+MP+++ +WN IS+ V GR
Sbjct: 72 LNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWS 131
Query: 92 -----------PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS 140
A D F ++R G + T + L CS L+Q G +HGF+V++
Sbjct: 132 SIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKN 191
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-ID-KNDVSWCSMLVVYVQNYEEENGCQ 198
GF+GNV V GLVD Y KC V A+ +F G+ D KN V W +M+ Y QN + +
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVE 251
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F +GVE + ++L+AC+ + G VH VK+ N++V SALVDMY
Sbjct: 252 FFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYA 311
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG +++A+ M + ++V WN+++ G+ G + AL F+ M R + +Y T
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHG-RNMKIDDY-TF 369
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEII 374
VL+ C K + IK G E+Y V VD+ + G +D AY +
Sbjct: 370 PSVLNCCVVGSINPKSVHGLI-------IKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422
Query: 375 KEMPMRPTISVWGALLN 391
++M + IS W +L+
Sbjct: 423 EKMLEKDVIS-WTSLVT 438
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 359/586 (61%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ T + A++ + + + GK +H A+++G V + + DMYSK G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD M ++ + +WN+ + V G P+ AI F + G +P +T L+A
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+ G+ +H F+ + ++SV N L+ Y KC V +A +F+ + + VSW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN F + G++P F + SV+ A A ++ + +H + ++
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+C++ NIFV +ALVDMY KCG+I A F+ + +R+++ WNA+I GY G AL
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M E PN +T + V+SACS +G V++G++ F SM YG++P +HY +VDL
Sbjct: 539 FDKMKKGAVE--PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A++ I+ MP+ P I+V+GA+L AC+++ E+G AA LF+L+P++ G H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+T +W + VRK M+ G+KK GCS + ++N +H F + T+H ++ I
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L E+KAAGY+PDTN L DVE++ + + HSEK+A+AFGL+ PG I +
Sbjct: 717 AFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A K+IS + GRE+IVRD RFH F +G CSC DYW
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 210/421 (49%), Gaps = 12/421 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L K GK++H + + +VF +MY+K
Sbjct: 138 MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ 197
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA KMFD MPER+L +WN I+ G K A++ + ++ G PD IT L A
Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D LL +G+ +HG+ +R+GF V++ L D Y KC V A+++FDG+ K VSW
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQN E E +F EG++P I L ACA + LE G+ VH +
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I V ++L+ MY KC + A FN + R V WNA+I GYA G AL+
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNC 437
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM S+ + P+ T+V V+ A + +V + K + + ++ + +VD+
Sbjct: 438 FSEMKSLGMK--PDSFTMVSVIPALAEL-SVTRHAKWIHGLIIRSCLDKNIFVTTALVDM 494
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-----DPN 415
+ G + A ++ + R I+ W A+++ YG LGR A D K+ +PN
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVIT-WNAMIDG---YGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 416 D 416
D
Sbjct: 551 D 551
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 195/390 (50%), Gaps = 12/390 (3%)
Query: 19 ASSALHIPVTGKQLHA---LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
A+ L + + K+LH L +K+G ++ ++SK G ++A ++F+ + ++
Sbjct: 52 AAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
A ++ + + A+ +R +P + F L C D + L+ G+++HG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
L+ + F NV G+V+ Y KC ++ A +FD + +++ VSW +++ + QN +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
++ L + EG P + +VL A A + L +G+S+H A++A + + +AL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY KCGS++ A + F+ M ++ +V WN+++ GY G + A++ FE+M + P
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID--PTG 349
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
VT++ L AC+ G +E+G K + + + ++ + + VD A +I
Sbjct: 350 VTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ R +S W A+ + G + GR++
Sbjct: 409 NLNGRTHVS-WNAM-----ILGYAQNGRVS 432
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/585 (40%), Positives = 352/585 (60%), Gaps = 3/585 (0%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+E + FTF + A+ L V G+Q+H+ +K+ + +VFV + D YSK
Sbjct: 203 KEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 262
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA K+FDEMPE++ ++N IS G+ K A D F L+ T + F L+ S
Sbjct: 263 DARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS 322
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ ++GRQ+H + + D + V N LVD Y KC + A+++F + ++ V W +
Sbjct: 323 NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 382
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ YVQ E G Q+F R+ V +S+L A A IA L LG+ +H+ +K+
Sbjct: 383 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 442
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
N+F GSAL+D+Y KCGSI+DA F +MP+RN+V WNA+I YA G A+ L SF+
Sbjct: 443 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 502
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
EM + P+ V+ + VLSACS +G VE+G+ F SMT Y + P EHYA VVD+L
Sbjct: 503 EMVLSGLQ--PDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLC 560
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGNHV 421
R+G + A +++ EMP+ P +W ++LNACR++ EL R AAD LF ++ D+ +V
Sbjct: 561 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 620
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
+SN++AA G+WE V K M+D G+KK SW+ +K+ H+F A D H + EI+
Sbjct: 621 NMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRK 680
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ L + M+ GY PDT+ AL++ +E+ K+ + +HSE++A+AF LI+ P G PI + K
Sbjct: 681 KIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMK 740
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR C DCH+A K IS IVGRE+ VRD+ RFH F DG+CSC D+W
Sbjct: 741 NLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 209/481 (43%), Gaps = 78/481 (16%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R P+ TF L + + Q+ +K G + VG + D Y K+
Sbjct: 135 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 194
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F EMPE ID+F TF A L A
Sbjct: 195 LDLACQLFKEMPE----------------------IDSF-------------TFAAVLCA 219
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LG+Q+H F++++ F NV V N L+DFY K + V A+ +FD + +++ VS+
Sbjct: 220 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 279
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y + + + +F + + K F +++LS + E+GR +HA +
Sbjct: 280 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 339
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ I VG++LVDMY KCG ++AE+ F + R+ V W A+I Y +G + L
Sbjct: 340 TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQL 399
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + + + T +L A + ++ G K +S +K G + ++D+
Sbjct: 400 FNKMR--QASVIADQATFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVFSGSALLDV 456
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE-------------------- 400
+ G + A + +EMP R +S W A+++A G+ E
Sbjct: 457 YAKCGSIKDAVQTFQEMPDRNIVS-WNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 515
Query: 401 -LGRIAA-----------------DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
LG ++A ++KLDP ++ + +M +GR+ EA+ + E
Sbjct: 516 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRRE-HYASVVDMLCRSGRFNEAEKLMAE 574
Query: 443 M 443
M
Sbjct: 575 M 575
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 153/350 (43%), Gaps = 43/350 (12%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K+G +A K+FD M ER TW I + K A + F+ ++R G EPD +TF
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L+ C+ + Q+ +++ G+D + V N LVD Y K N + LA
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA--------- 198
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
CQ+F +E E F ++VL A + + LG+ +
Sbjct: 199 ----------------------CQLF----KEMPEIDSFTFAAVLCANIGLDDIVLGQQI 232
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ +K N+FV +AL+D Y K S+ DA F++MPE++ V +N II GYA G
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292
Query: 295 DMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A F E+ T+ + P +LS S E G +I ++ T+
Sbjct: 293 KYAFDLFRELQFTAFDRKQFP----FATMLSIASNTLDWEMGRQI-HAQTIVTTADSEIL 347
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+VD+ + G + A I + R + W A+++A G E G
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP-WTAMISAYVQKGFYEEG 396
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + + TF L +AS+++ GKQLH+ +KSG + +VF G + D+Y+K G
Sbjct: 403 MRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGS 462
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA + F EMP+RN+ +WNA IS G + + +F + +G +PD ++F L+A
Sbjct: 463 IKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSA 522
Query: 121 CSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFY---GKCNEVGLAKVVFDGIIDKN 176
CS L++ G + D +VD G+ NE K++ + ID +
Sbjct: 523 CSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEA--EKLMAEMPIDPD 580
Query: 177 DVSWCSML 184
++ W S+L
Sbjct: 581 EIMWSSVL 588
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/591 (41%), Positives = 361/591 (61%), Gaps = 9/591 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + P++FT + ++L G+QLH LK G DV V + +Y + G
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPK--NAIDAFINLRRTGGEPDLITFCAFL 118
+ K F M + + +WN+ I A+ P A+++F+ + R G +P+ +TF L
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIG-ALADSEPSMLEAVESFLVMMRAGWDPNRVTFITIL 599
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND- 177
A S SL +LG+Q+H +++ + ++ N L+ YGKC ++G + +F + D+ D
Sbjct: 600 AAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDE 659
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW SM+ Y+ N M ++G F ++VLSACA +A LE G VH
Sbjct: 660 VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+V+AC+E +I +GSALVDMY KCG I A F MP RNL WN++I GYA GH +
Sbjct: 720 SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKS 779
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F +M +P++VT V VLSACS AG V +G F SM+ YG+ P EH++C+
Sbjct: 780 LDLFAQMKLQ--GPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCM 837
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKLDPN 415
VDLLGR G +++ + + +MP++P + +W +L AC R G+ LGR AA+ L +++P
Sbjct: 838 VDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPT 897
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
++ N++LLSNM+A+ G+W++ R M+ +KK AGCSW+++K+ +H+F A D SH
Sbjct: 898 NAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPE 957
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
I L +L +M+ AGYIP+T FALYD+E E K + +HSEKIA+AF ++ P +
Sbjct: 958 KDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKM 1016
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+CGDCHSAFK+IS IV R++++RD+NRFH F +G CSC D+W
Sbjct: 1017 PIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 203/394 (51%), Gaps = 12/394 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIP--VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+ PN++TF L A+ +L V +QL KSG +HD++VG + ++K G
Sbjct: 278 LKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGY 337
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F +M RN+ + N I V R + A++ F+ ++ + E + ++ L A +
Sbjct: 338 AKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSV-ELNPNSYMIILTAFPE 396
Query: 124 CSLLQLGR----QLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+L+ G+ ++H FL+RSG + +++ NGL++ Y KC + A VVF + +K+ V
Sbjct: 397 FHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSV 456
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W SM+ QN + + F RR + P +F + S LS+CA + + +G +H
Sbjct: 457 TWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEG 516
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM-A 297
+K ++ ++ V +AL+ +YG+CG +++ + AF+ M + + V WN++IG A + + A
Sbjct: 517 LKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEA 576
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ SF + MR PN VT + +L+A S E G +I +++ LK + +
Sbjct: 577 VESF--LVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI-HALVLKRNVAADTAIENAL 633
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G+ G + I M R W ++++
Sbjct: 634 LACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 16/319 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
++LH K+G ++D+F+ + ++Y++ G K+FDEMP RNL +W+ IS
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL--LQLGRQLHGFLVRSGFDGNV 146
P A + F + G P+ F + + AC +C L+ G Q+HG + ++ + +V
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 147 SVCNGLVDFYGKCNEVGL---AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ N L+ YG N +G+ A+ FD I +N VS SM+ VY Q + + +F T
Sbjct: 212 TASNVLISMYG--NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 204 RRE----GVEPKDFMISSVLSACARIA--GLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
++E G++P ++ S++SA +A GL L + K+ +++VGSALV +
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
K GSI A+ F KM RN+V N +I G Q + A+ F EM E PN +
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD-SVELNPN--S 386
Query: 318 LVCVLSACSRAGAVEKGMK 336
+ +L+A +E G +
Sbjct: 387 YMIILTAFPEFHVLENGKR 405
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 27/403 (6%)
Query: 8 PNDFTFPCLFKASSAL--HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT-GLKDDA 64
PN + F + +A + G Q+H L K+ ++DV MY G+ D A
Sbjct: 172 PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYA 231
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT----GGEPDLITFCAFLNA 120
+ FD + RNL + N+ IS G +A D F +++ G +P+ TF + ++A
Sbjct: 232 RRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISA 291
Query: 121 CSDCSL----LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
CSL L L QL + +SGF ++ V + LV + K +G AK +F + +N
Sbjct: 292 T--CSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRN 349
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLELGR-- 232
VS +++ V+ E ++F+ ++ VE P +MI +L+A LE G+
Sbjct: 350 VVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMI--ILTAFPEFHVLENGKRK 406
Query: 233 --SVHAVAVKA-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
VHA +++ + I +G+ L++MY KCG+I DA + F M ++ V WN++I G
Sbjct: 407 GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLD 466
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
A+ +F+EM R E P+ T++ LS+C+ G + G ++ + LK G+
Sbjct: 467 QNKQFLEAVKTFQEMR--RTELYPSNFTMISALSSCASLGWISVGEQL-HCEGLKLGLDL 523
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ L G G V + M +S W +L+ A
Sbjct: 524 DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVS-WNSLIGA 565
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H K ++F+ + L+++Y + G + F++MP RNLV W+ +I GY
Sbjct: 95 LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRM 154
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG--AVEKGMKIFYSMTLKYGIKPGA 351
+ A F +M S +PN+ V+ AC G ++ GM+I + + K
Sbjct: 155 PNEACELFRKMVS--DGFMPNHYAFGSVIRACQECGEYGLKFGMQI-HGLMSKTQYVNDV 211
Query: 352 EHYACVVDLLGRA-GLVDRAYEIIKEMPMRPTISV 385
++ + G A G+VD A + R +S+
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSL 246
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 353/612 (57%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A+SAL G+Q H L+ G + FVG MY+K GL DA
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 66 KMFDEMPERNLA-------------------------------TWNAYISNAVLGGRPKN 94
++FDEM +N+ TW ++ G
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F +R G D TF + L AC S L+ G+Q+H +++R+ +D NV V + LVD
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + A+ F + KN +SW +++V Y QN E ++F +R+G++P DF
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ SV+S+CA +A LE G H +A+ + + I V +ALV +YGKCGSI+DA F++M
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ V W A++ GYA G A + FE+M + + P+ VT + VLSACSRAG VEKG
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAK--DVKPDGVTFIGVLSACSRAGFVEKG 493
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F+SM +GI P +HY C++DL R+G + A E IK+MPM P WG LL+ACR
Sbjct: 494 CSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACR 553
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G E+G+ AA+NL ++DP + ++VLL +M A G W + +R+ M+D +KK GC
Sbjct: 554 LRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGC 613
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI KN++HIF A D SH + I L L +M GY PD + L+DV + +K+
Sbjct: 614 SWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHM 673
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
V HHSEK+A+AFGL+ +P +PIRI KNLR+C DCH+A K IS I GR+++VRD RFH+
Sbjct: 674 VSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHK 733
Query: 575 FWDGYCSCSDYW 586
F +G CSC D+W
Sbjct: 734 FSNGVCSCGDFW 745
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 182/378 (48%), Gaps = 45/378 (11%)
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAF 117
L DD D +F M +R+ ++NA I+ GG A+ + L R G P IT A
Sbjct: 87 LLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAM 146
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----- 172
+ A S LGRQ H ++R GF N V + LV Y K +G AK VFD +
Sbjct: 147 VMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNV 206
Query: 173 --------------------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
D++ ++W +M+ + QN E F R +
Sbjct: 207 VMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQ 266
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ + S+L+AC ++ LE G+ +HA ++ + N+FVGSALVDMY KC SI+ A
Sbjct: 267 GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA 326
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E AF +M +N++ W A+I GY G ++ A+ F EM R P+ TL V+S+C+
Sbjct: 327 ETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEM--QRDGIDPDDFTLGSVISSCA 384
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPT 382
++E+G + F+ + L G+ HY V V L G+ G ++ A+ + EM
Sbjct: 385 NLASLEEGAQ-FHCLALVSGLM----HYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQ 439
Query: 383 ISVWGALLNACRVYGKPE 400
+S W AL+ +G+ +
Sbjct: 440 VS-WTALVTGYAQFGRAK 456
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 166/342 (48%), Gaps = 7/342 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + I+ + +TF + A AL GKQ+HA +++ +VFVG + DMYSK
Sbjct: 263 MRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRS 322
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ F M +N+ +W A I G + A+ F ++R G +PD T + +++
Sbjct: 323 IKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISS 382
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG ++V N LV YGKC + A +FD ++ + VSW
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSW 442
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ Y Q + +F + V+P VLSAC+R +E G S H++
Sbjct: 443 TALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQK 502
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ + ++D+Y + G +++AE +MP + + W ++ +G ++
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQ 562
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSAC----SRAGAVEKGMK 336
+ E + + + +YV L+C + A ++ + +GM+
Sbjct: 563 WAAENLLEIDPQNPASYV-LLCSMHATKGNWNQVAQLRRGMR 603
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +++ +L+A + GR A V A N+F +AL+ + D +
Sbjct: 39 PPTHLLNHLLTAYGKA-----GRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDS 93
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F M +R+ V +NA+I G++ G A+ + + P+ +T+ ++ A S
Sbjct: 94 LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASAL 153
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
G G + F+ L+ G A + +V + + GL+ A + EM
Sbjct: 154 GDRALGRQ-FHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEM 201
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 345/582 (59%), Gaps = 4/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
+ P+ +T + KA+S+L ++ KQ+H A+K+ + D FV + D YS+ +A
Sbjct: 419 LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ +F +L WNA +S ++ F + + G D T L C
Sbjct: 479 EVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFL 537
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ G+Q+H + ++SG+D ++ V +G++D Y KC ++ A+ FD I +DV+W +++
Sbjct: 538 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
++N EEE +F R GV P +F I+++ A + + LE GR +HA A+K
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 657
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FVG++LVDMY KCGSI DA F ++ N+ WNA++ G A G AL F++M
Sbjct: 658 SDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQM 717
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
S+ + P+ VT + VLSACS +G V + K SM YGIKP EHY+C+ D LGRA
Sbjct: 718 ESLGIK--PDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRA 775
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GLV A +I M M + S++ LL ACRV G E G+ A L +L+P DS +VLLS
Sbjct: 776 GLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 835
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
NM+AA +W+E L R MK +KK G SWI VKN+IH+F D S+ + I +
Sbjct: 836 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVK 895
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+ ++K GY+P+T+F L DVEEEEK + +HSEK+A+AFGL++ PP PIR+ KNLR
Sbjct: 896 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 955
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A K+IS + RE+++RD NRFHRF DG CSC DYW
Sbjct: 956 VCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 192/391 (49%), Gaps = 6/391 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ TF + + L G+Q+H +ALK G + V S +MY K A +F
Sbjct: 321 DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL-L 127
+ M ER+L +WN+ I+ A+ F+ L R G +PD T + L A S L
Sbjct: 381 NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGL 440
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
L +Q+H +++ + V L+D Y + + A+V+F G + + V+W +M+ Y
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGY 499
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+++ ++F ++G DF +++VL C + + G+ VHA A+K+ + ++
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDL 559
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+V S ++DMY KCG + A+ AF+ +P + V W +I G G + AL F +M M
Sbjct: 560 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLM 619
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+P+ T+ + A S A+E+G +I ++ LK +VD+ + G +
Sbjct: 620 --GVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTSDPFVGTSLVDMYAKCGSI 676
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
D AY + K + M I+ W A+L +G+
Sbjct: 677 DDAYCLFKRIEMM-NITAWNAMLVGLAQHGE 706
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 10/324 (3%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
N +S + G+ + F+++ + E D +TF L L LG+Q+H ++
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
G D ++V N L++ Y K ++GLA+ VF+ + +++ +SW S++ Q+ E +
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 200 FLTARREGVEPKDFMISSVLSACARIA-GLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F+ R G++P + ++SVL A + + GL L + +H A+K + FV +AL+D Y
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGY--AHQGHADMALSSFEEMTSMRCEAVPNYV 316
+ +++AE+ F + +LV WNA++ GY +H GH + L + R +
Sbjct: 471 RNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDD----F 525
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TL VL C A+ +G ++ ++ +K G + ++D+ + G + A
Sbjct: 526 TLATVLKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 584
Query: 377 MPMRPTISVWGALLNACRVYGKPE 400
+P+ P W L++ C G+ E
Sbjct: 585 IPV-PDDVAWTTLISGCIENGEEE 607
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 149/346 (43%), Gaps = 10/346 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ +DFT + K L GKQ+HA A+KSG D++V DMY K G
Sbjct: 515 MHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 574
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A FD +P + W IS + G + A+ F +R G PD T A
Sbjct: 575 MSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKA 634
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L+ GRQ+H ++ + V LVD Y KC + A +F I N +W
Sbjct: 635 SSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 694
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVA 238
+MLV Q+ E + Q+F G++P VLSAC+ +GL E + + ++
Sbjct: 695 NAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH-SGLVSEAYKYIRSMH 753
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
++ I S L D G+ G +++AE + M E + + ++ QG +
Sbjct: 754 RDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETG 813
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSR------AGAVEKGMKI 337
++ + YV L + +A S+ A + KG K+
Sbjct: 814 KRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 859
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
FL S L LG+ H ++ + + N L+ Y KC + A+ VFD + +++
Sbjct: 52 FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERD 111
Query: 177 DVSWCSMLVVYVQNYE--EENGCQMFL---TARREGVEPKDFMISSVLSACARIAGLELG 231
VSW S+L Y Q+ E EN + FL R++ V +S +L C +
Sbjct: 112 LVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
S H A K ++G+ FV ALV++Y K G +++ + F +MP R++V WN ++ Y
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231
Query: 292 GHADMA--LSSFEEMTSMRCEAVPNYVTL 318
G + A LSS + + PN +TL
Sbjct: 232 GFKEEAIDLSSAFHTSGLH----PNEITL 256
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 135/326 (41%), Gaps = 34/326 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R++ + + T + K + H A K G D FV + ++Y K G
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +F+EMP R++ WN + + G + AID +G P+ IT
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT------- 255
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L+L ++ SG D G V + N+ II +N +
Sbjct: 256 ------LRLLSRI------SGDDSEA----GQVKSFENGNDAS----AVSEIISRNKI-- 293
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
L Y+ + + F+ +E VL+ R+ L LG+ VH +A+K
Sbjct: 294 ---LSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V ++L++MY K I A FN M ER+L+ WN++I G A A+
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACS 326
F M +RC P++ T+ VL A S
Sbjct: 411 F--MQLLRCGLKPDHYTMTSVLKAAS 434
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 41/367 (11%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK HA L + + F+ + MYSK G A ++FD+MPER+L +WN+ ++
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 89 G--GRPKNAIDAFI---NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G +N +AF+ LR+ +T L C + HG+ + G D
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
G+ V LV+ Y K +V +V+F+ + ++ V W ML Y++ +E +
Sbjct: 185 GDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
G+ P + L +RI+G + + G +
Sbjct: 245 HTSGLHPNEI----TLRLLSRISGDD----------------------------SEAGQV 272
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+ E + ++ N I+ GY H G L F +M E + VT + VL+
Sbjct: 273 KSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLEC--DQVTFILVLA 330
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
R ++ G ++ + M LK G+ ++++ + + A + M R I
Sbjct: 331 TAVRLDSLALGQQV-HCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLI 389
Query: 384 SVWGALL 390
S W +++
Sbjct: 390 S-WNSVI 395
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/591 (41%), Positives = 350/591 (59%), Gaps = 9/591 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN FTF + +A G Q+H + +KSG +FVG S +MYSK+ +
Sbjct: 184 MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD M RN +WN+ I+ V G A + F +R G + F +
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF---DGIIDKND 177
C++ + +QLH ++++G D ++++ L+ Y KC+E+ A +F G+ +N
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV--QNV 361
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACAR-IAGLELGRSVH 235
VSW +++ YVQN + +F RRE GVEP +F SSVL+ACA A +E G+ H
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 421
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ ++K+ + V SALV MY K G+I+ A F + +R+LV WN++I GYA G
Sbjct: 422 SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGK 481
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
+L FEEM S E + +T + V+SAC+ AG V +G + F M Y I P EHY+
Sbjct: 482 KSLKIFEEMRSKNLEL--DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYS 539
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VDL RAG++++A ++I +MP ++W LL ACRV+ +LG +AA+ L L P
Sbjct: 540 CMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQ 599
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
DS +VLLSN++A G W+E VRK M +KK AG SWI VKN+ F A D SH +
Sbjct: 600 DSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQ 659
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ I L +L +K AGY PDT + L+DVEEE K + HSE++A+AFGLIA PPG
Sbjct: 660 SDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGT 719
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI+I KNLR+CGDCH+ K IS I GR+++VRD+NRFH F G CSC DYW
Sbjct: 720 PIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 205/399 (51%), Gaps = 8/399 (2%)
Query: 3 RECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R SP D + C+ K L + GKQ+H +K G + DV VG S DMY KT
Sbjct: 84 RRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESV 143
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+D +++FDEM +N+ +W + ++ G + A+ F ++ G +P+ TF A L
Sbjct: 144 EDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGL 203
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ ++ G Q+H +++SG D + V N +V+ Y K V AK VFD + ++N VSW
Sbjct: 204 AADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWN 263
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ +V N + ++F R EGV+ + ++V+ CA I + + +H +K
Sbjct: 264 SMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKN 323
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + +AL+ Y KC I DA F M +N+V W AII GY G D A++
Sbjct: 324 GSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGA-VEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +M R E V PN T VL+AC+ A VE+G K F+S ++K G + +V
Sbjct: 384 FCQMR--REEGVEPNEFTFSSVLNACAAPTASVEQG-KQFHSCSIKSGFSNALCVSSALV 440
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G ++ A E+ K R +S W ++++ +G
Sbjct: 441 TMYAKRGNIESANEVFKRQVDRDLVS-WNSMISGYAQHG 478
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 183/396 (46%), Gaps = 20/396 (5%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ ++FDE P++ L+ N + + K A++ F+ LRR+G D + L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+G+Q+H ++ GF +VSV LVD Y K V + VFD + KN VSW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y QN E ++F + EG++P F ++VL A +E G VH + +K+ +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ IFVG+++V+MY K + DA+ F+ M RN V WN++I G+ G + L +FE
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG---LDLEAFEL 281
Query: 304 MTSMRCEAVPNYVTL-VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
MR E V T+ V+ C+ + K + +K G ++
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFA-KQLHCQVIKNGSDFDLNIKTALMVAYS 340
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF-------KLDPN 415
+ +D A+++ M + W A+++ G+ + A NLF ++PN
Sbjct: 341 KCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTD----RAMNLFCQMRREEGVEPN 396
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
+ +L+ A T E+ K+ IK G
Sbjct: 397 EFTFSSVLNACAAPTASVEQG----KQFHSCSIKSG 428
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/617 (39%), Positives = 350/617 (56%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E + P T + +SAL G +H L+ G FVG DMY+K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 61 KDDADKMFDEMP-------------------------------ERNLATWNAYISNAVLG 89
DA ++F EM +R+ TW ++
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G A+D F +R G D TF + L AC + L+ G+Q+H ++ R+ ++ NV V
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG 316
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y KC + LA+ VF + +N +SW +M+V Y QN E + F + +G++
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P DF + SV+S+CA +A LE G H +A+ + + I V +ALV +YGKCGSI+DA
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M + V W A++ GYA G A + FE+M + + P+ VT + VLSACSRAG
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLK--PDGVTFIGVLSACSRAG 494
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VEKG F SM +GI P +HY C++DL R+G A E IK+MP P W L
Sbjct: 495 LVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATL 554
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CR+ G E+G+ AA+NL + DP + ++VLL +M AA G+W E +R+ M+D +K
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVK 614
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCSWI KN++HIF A D SH ++ I L L +M GY PD + L+DV +
Sbjct: 615 KEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADA 674
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+K+ + HHSEK+A+AFGLI +P +PIRI KNLR+C DCH+A KFIS I GR+++VRD
Sbjct: 675 DKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDA 734
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH+F DG CSC D+W
Sbjct: 735 VRFHKFSDGTCSCGDFW 751
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 194/433 (44%), Gaps = 68/433 (15%)
Query: 32 LHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS------ 84
+H L LK+ Q F+ Y+K+G A ++FDEMP+ NL T NA +S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 85 --------------------NAVL-----GGRPKNAIDAFIN-LRRTGGEPDLITFCAFL 118
NA++ G P ++ + LR P IT A +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK-------------------- 158
S S LG +H ++R GF V + LVD Y K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 159 -----------CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
C + AK +F ++D++ ++W +M+ QN + +F R EG
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + S+L+AC +A LE G+ +HA + E N+FVGSALVDMY KC SI+ AE
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M RN++ W A+I GY ++ A+ +F EM + P+ TL V+S+C+
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK--PDDFTLGSVISSCAN 391
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
++E+G + F+ + L G+ +V L G+ G ++ A+ + EM +S W
Sbjct: 392 LASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 449
Query: 388 ALLNACRVYGKPE 400
AL+ +GK +
Sbjct: 450 ALVTGYAQFGKAK 462
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/560 (40%), Positives = 358/560 (63%), Gaps = 8/560 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H A+K G ++FV + D+Y K G+ ++ K+FD M R+L TWN+ IS GG+
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCN 150
+A++ F +R +G PD++T + +A + C + GR +H ++VR G+D G++ N
Sbjct: 252 VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGN 311
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVE 209
+VD Y K +++ A+ +FD + ++ VSW +++ Y+QN ++ + EG++
Sbjct: 312 AIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLK 371
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P SVL A + + L+ G +HA+++K + +++VG+ ++D+Y KCG + +A +
Sbjct: 372 PIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLL 431
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRA 328
F + P R+ WNA+I G GH ALS F +M E + P++VT V +L+ACS A
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ---EGISPDHVTFVSLLAACSHA 488
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F M YGIKP A+HYAC+VD+ GRAG +D A++ I+ MP++P ++WGA
Sbjct: 489 GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGA 548
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACR++G E+G++A+ NLF+LDP + G +VL+SNM+A G+W+ D VR ++ +
Sbjct: 549 LLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNL 608
Query: 449 KKGAGCSWISVKNRIHIFQAKDTS--HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+K G S I VK +++F + + H ++ EIQ L L ++++ GY+PD +F L DV
Sbjct: 609 QKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDV 668
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EE+EK + +HSE++A+AFG+I PP P+ I KNLR+CGDCH+A K+IS I RE+IV
Sbjct: 669 EEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIV 728
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+NRFH F DGYCSC D+W
Sbjct: 729 RDSNRFHHFKDGYCSCGDFW 748
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 198/390 (50%), Gaps = 10/390 (2%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFD 69
FTFP L +A+ P T QLHA AL+ G + D F + Y + G DA + FD
Sbjct: 72 FTFPPLLRAAQG---PGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
EM R++ WNA +S R A+ F + G D +T + L C L
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
+H + V+ G D + VCN ++D YGK + + VFDG+ ++ V+W S++ + Q
Sbjct: 189 ALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQ 248
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-GNIF 248
+ + +MF R GV P + S+ SA A+ + GRSVH V+ + G+I
Sbjct: 249 GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDII 308
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
G+A+VDMY K I+ A+ F+ MP R+ V WN +I GY G A A+ ++ M +
Sbjct: 309 AGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ--K 366
Query: 309 CEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E + P T V VL A S GA+++G ++ +++++K G+ CV+DL + G +
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRM-HALSIKTGLNLDVYVGTCVIDLYAKCGKL 425
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYG 397
D A + ++ P R T W A+++ V+G
Sbjct: 426 DEAMLLFEQTPRRST-GPWNAVISGVGVHG 454
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+ E + P TF + A S L G ++HAL++K+G DV+VG D+Y+K G
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D+A +F++ P R+ WNA IS + G A+ F +++ G PD +TF + L AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485
Query: 122 SDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKN 176
S L+ GR + + G +VD +G+ ++ A FD I I +
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDA---FDFIRNMPIKPD 542
Query: 177 DVSWCSML 184
W ++L
Sbjct: 543 SAIWGALL 550
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/591 (39%), Positives = 360/591 (60%), Gaps = 11/591 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+ R+ + P+ FT + +A S+L Q+HA A+K+G + D FV + D+YSK G
Sbjct: 1027 LLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRG 1086
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
++A+ +F +LA+WNA + ++ G A+ +I ++ +G D IT
Sbjct: 1087 KMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAK 1146
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L+ G+Q+H +V+ GF+ ++ V +G++D Y KC E+ A+ VF I +DV+
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ V+N +EE+ + R V+P ++ ++++ AC+ + LE GR +HA V
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + FV ++LVDMY KCG+I+DA F + R + WNA+I G A G+A AL
Sbjct: 1267 KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ 1326
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M S +P+ VT + VLSACS +G V + + FYSM YGI+P EHY+C+VD
Sbjct: 1327 FFKYMKSRGV--MPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVD 1384
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
L RAG ++ A ++I MP + S++ LLNACRV E G+ A+ L L+P+DS
Sbjct: 1385 ALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1444
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN--- 476
+VLLSN++AA +WE R M+ V +KK G SW+ +KN++H+F A D SHE
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504
Query: 477 -TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+++ ++ ++REE GY+PDT+FAL DVEEE+K + +HSEK+A+A+GL+ PP
Sbjct: 1505 YNKVEYIMKRIREE----GYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPST 1560
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+CGDCHSA K+IS + RE+++RD NRFH F +G CSC DYW
Sbjct: 1561 TLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 183/389 (47%), Gaps = 7/389 (1%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
TF + + L+ GKQ+H + ++SG V VG +MY K G A +F +
Sbjct: 936 LTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQ 995
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-LLQL 129
M E +L +WN IS L G + ++ F++L R PD T + L ACS L
Sbjct: 996 MNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYL 1055
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
Q+H +++G + V L+D Y K ++ A+ +F + SW +++ Y+
Sbjct: 1056 ATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIV 1115
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + ++++ + G + + A + GL+ G+ +HAV VK ++FV
Sbjct: 1116 SGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
S ++DMY KCG ++ A F+++P + V W +I G G + AL ++ +M +
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKV 1235
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT-LKYGIKPGAEHYACVVDLLGRAGLVD 368
+ P+ T ++ ACS A+E+G +I ++ L P +VD+ + G ++
Sbjct: 1236 Q--PDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIE 1291
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYG 397
A + K R I+ W A++ +G
Sbjct: 1292 DARGLFKRTNTR-RIASWNAMIVGLAQHG 1319
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 5/327 (1%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
++ WN +S + G A+D F+++ + D +TF L + + L+LG+Q+H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G ++RSG D VSV N L++ Y K V A+ VF + + + +SW +M+ + EE
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVAVKACVEGNIFVGSAL 253
MF+ R+ + P F ++SVL AC+ + G L +HA A+KA V + FV +AL
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+D+Y K G +++AE F +L WNAI+ GY G AL + M
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILM--QESGERS 1136
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ +TLV A +++G +I +++ +K G + V+D+ + G ++ A +
Sbjct: 1137 DQITLVNAAKAAGGLVGLKQGKQI-HAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPE 400
E+P P W +++ C G+ E
Sbjct: 1196 FSEIP-SPDDVAWTTMISGCVENGQEE 1221
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 171/395 (43%), Gaps = 43/395 (10%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L +A +A + + GK+ HA L SG D FV + MY+K G A K+FD P
Sbjct: 660 FSILRQAIAASDLSL-GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 73 E--RNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+ R+L TWNA +S A + + F LRR+ T C +
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
LHG+ V+ G +V V LV+ Y K + A+V+FDG+ ++ V W M+ YV
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSV--LSACARIAGLELGRSVHAVAVKACVEGNI 247
E +F R G P D + ++ + C + LEL + A A K +
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNI-LEL-KQFKAYATK------L 890
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F MY GS +++ WN + + +G A A+ F +M +
Sbjct: 891 F-------MYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINS 929
Query: 308 R--CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R C+ +T V +L+ + +E G +I + + ++ G+ C++++ +AG
Sbjct: 930 RVACDG----LTFVVMLTVVAGLNCLELGKQI-HGIVMRSGLDQVVSVGNCLINMYVKAG 984
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
V RA + +M IS W +++ C + G E
Sbjct: 985 SVSRARSVFGQMNEVDLIS-WNTMISGCTLSGLEE 1018
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 191/465 (41%), Gaps = 54/465 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR +S T +FK P + LH A+K G DVFV + ++Y+K GL
Sbjct: 751 LRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGL 810
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +FD M R++ WN + V A+ F RTG PD
Sbjct: 811 IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPD---------- 860
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-S 179
D +L L R V C + + ++D D +DV
Sbjct: 861 --DVTLRTLSR--------------VVKCKKNILELKQFKAYATKLFMYDD--DGSDVIV 902
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W L ++Q E F+ V +L+ A + LELG+ +H + +
Sbjct: 903 WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
++ ++ + VG+ L++MY K GS+ A F +M E +L+ WN +I G G + ++
Sbjct: 963 RSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVG 1022
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYAC 356
F + +R +P+ T+ VL ACS ++E G + ++ +K G+ +
Sbjct: 1023 MFVHL--LRDSLLPDQFTVASVLRACS---SLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK-PELGRIAADNLFKLDPN 415
++D+ + G ++ A E + ++ W A+++ V G P+ R+ + +
Sbjct: 1078 LIDVYSKRGKMEEA-EFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY---ILMQESG 1133
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
+ + + L N A G VG+K+G + VK
Sbjct: 1134 ERSDQITLVNAAKAAGGL------------VGLKQGKQIHAVVVK 1166
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/580 (39%), Positives = 352/580 (60%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA-DK 66
P++FT PC+ KA + L G+ +H +A K + DVFVG + MY K GL ++A +
Sbjct: 206 PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKR 265
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD M + +++WNA + P+ A+D ++ + +G +PD T + L ACS
Sbjct: 266 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 325
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L G ++HGF +R+G + + L+ Y C + A+V+FDG+ ++ VSW M+
Sbjct: 326 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 385
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y QN + +F +G++P + I V AC++++ L LG+ +H A+KA + +
Sbjct: 386 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 445
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
IFV S+++DMY K G I ++ F+++ E+++ WN II GY G AL FE+M
Sbjct: 446 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM-- 503
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+R P+ T +L ACS AG VE G++ F M + I+P EHY CVVD+LGRAG
Sbjct: 504 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGR 563
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+D A +I+EMP P +W +LL++CR++G LG A+ L +L+P N+VL+SN+
Sbjct: 564 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNL 623
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
FA +G+W++ VR MKD+G++K AGCSWI V ++H F D E++ +L
Sbjct: 624 FAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRL 683
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++ + GY PDT L+D+EEE+K+ + HSEK+A++FGL+ G+P+R+ KNLRIC
Sbjct: 684 EVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRIC 743
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH+A KFIS +V R+++VRDN RFH F DG CSC DYW
Sbjct: 744 GDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 181/374 (48%), Gaps = 7/374 (1%)
Query: 28 TGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G++LH + S Q +D + MYS G D+ +FD++ +NL WNA +S
Sbjct: 123 VGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAY 182
Query: 87 VLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
++A+ F L T +PD T + AC+ L LG+ +HG + +
Sbjct: 183 TRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD 242
Query: 146 VSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
V V N L+ YGKC V A K VFD + K SW ++L Y QN + ++L
Sbjct: 243 VFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT 302
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G++P F I S+L AC+R+ L G +H A++ + + F+G +L+ +Y CG
Sbjct: 303 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF 362
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A++ F+ M R+LV WN +I GY+ G D A++ F +M S + P + ++CV A
Sbjct: 363 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ--PYEIAIMCVCGA 420
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS+ A+ G K + LK + + ++D+ + G + + I + + S
Sbjct: 421 CSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 385 VWGALLNACRVYGK 398
W ++ ++G+
Sbjct: 480 -WNVIIAGYGIHGR 492
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 2/315 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT L A S + G+++H AL++G D F+G S +Y G A
Sbjct: 306 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQ 365
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M R+L +WN I+ G P AI+ F + G +P I ACS S
Sbjct: 366 VLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS 425
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG++LH F +++ ++ V + ++D Y K +GL++ +FD + +K+ SW ++
Sbjct: 426 ALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIA 485
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVE 244
Y + + ++F R G++P DF + +L AC+ +E G + +E
Sbjct: 486 GYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIE 545
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VDM G+ G I DA +MP + + W++++ G+ + +
Sbjct: 546 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANK 605
Query: 304 MTSMRCEAVPNYVTL 318
+ + E NYV +
Sbjct: 606 LLELEPEKPENYVLI 620
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 125/235 (53%), Gaps = 8/235 (3%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG-LVDFYGKCNEVGLAKVVFDGIIDK 175
L AC +++GR+LH + S N V N ++ Y C +++VFD + K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRS 233
N W +++ Y +N E+ +F L + E +P +F + V+ ACA + L LG+
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH-KPDNFTLPCVIKACAGLLDLGLGQI 229
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQG 292
+H +A K + ++FVG+AL+ MYGKCG +++A + F+ M + + WNA++ GYA
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
AL + +MT + P++ T+ +L ACSR ++ G +I + L+ G+
Sbjct: 290 DPRKALDLYLQMTDSGLD--PDWFTIGSLLLACSRMKSLHYGEEI-HGFALRNGL 341
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFV-GSALVDMYGKCGSIQDAEIAFNKMPER 276
+L AC + +E+GR +H + + N FV + ++ MY CGS D+ + F+K+ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM- 335
NL WNAI+ Y + A+S F E+ S+ E P+ TL CV+ AC AG ++ G+
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISV-TEHKPDNFTLPCVIKAC--AGLLDLGLG 227
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+I + M K + ++ + G+ GLV+ A + + ++ T+S W ALL
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P + C+ A S L GK+LH ALK+ D+FV S DMY+K G
Sbjct: 402 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 461
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++FD + E+++A+WN I+ + GR K A++ F + R G +PD TF L A
Sbjct: 462 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 521
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ G + + L + + +VD G+ + A +++ + D +
Sbjct: 522 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 581
Query: 179 SWCSML 184
W S+L
Sbjct: 582 IWSSLL 587
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/612 (38%), Positives = 358/612 (58%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------ 59
+ PN +TFP L K+ + L GKQ+HA LK G + DVF+ S +MY+++G
Sbjct: 125 VEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQ 184
Query: 60 -------------------------LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
D A ++FDEMP +++ +WNA I+ GR K
Sbjct: 185 LVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKE 244
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ F ++R+ P+ T + L+AC+ + L LG + ++ G N+ + N L+D
Sbjct: 245 ALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALID 304
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC ++ A+ +FD +++++ +SW M+ Y + +F GVEP +
Sbjct: 305 MYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEIT 364
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L +CA + ++LG+ +HA K + + ++L+D+Y KCG+I A F+ M
Sbjct: 365 FLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G A G AD A F +M+S E PN +T V +LSAC AG V+ G
Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIE--PNEITFVGILSACKHAGLVDLG 482
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+ F SM Y I P ++HY C++DLLGRAGL + A +++ M ++P ++WG+LL ACR
Sbjct: 483 QQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACR 542
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+G+ ELG + A+ LF+L+P++ G +VLLSN++A G+W++ +R + D G+KK GC
Sbjct: 543 DHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGC 602
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
+ I V N +H F D H ++ +I ML ++ E++K G++ DT+ LYD++EE K
Sbjct: 603 TTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGA 662
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG PIRI KNLR+C +CHSA K IS I RE+I RD NRFH
Sbjct: 663 LSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHH 722
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 723 FKDGSCSCNDYW 734
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 200/419 (47%), Gaps = 46/419 (10%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSA---FDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
T KQ+HA +K+G +H+ S F S++G A +F+ + E NL WN+ I
Sbjct: 44 TFKQIHAHIIKTG-LHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIR 102
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
+ P A+ F+ + +G EP+ TF L +C+ + G+Q+H +++ GF
Sbjct: 103 GLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVS 162
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID---------- 174
+V + L++ Y + E+ A++VFD G +D
Sbjct: 163 DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMP 222
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
K+ VSW +M+ Y Q + +F R+ V P + I SVLSACA+ L+LG S
Sbjct: 223 VKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS 282
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+ + + N+ + +AL+DMY KCG +Q A F+ M ER+++ WN +IGGY H
Sbjct: 283 MRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCS 342
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL+ F EM + E P +T + +L +C+ GA++ G I + +
Sbjct: 343 YKEALALFREMLASGVE--PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSV-STSL 399
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++DL + G + A ++ M ++ +++ W A++ ++G+ AD F+L
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGLAMHGQ-------ADKAFEL 450
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAKVVFDGIIDK 175
L S C ++ +Q+H ++++G + + L++F + ++ A +F+ I +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W SM+ + F+ GVEP + +L +CA++A G+ +H
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK----------------------- 272
A +K ++F+ ++L++MY + G + +A++ F++
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 273 --------MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
MP +++V WNA+I GYA G + AL FE+M + PN T+V VLSA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMR--KANVPPNESTIVSVLSA 270
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+++ A++ G + S G+ + ++D+ + G + A E+ +M R IS
Sbjct: 271 CAQSNALDLGNSM-RSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVIS 329
Query: 385 VWGALL 390
W ++
Sbjct: 330 -WNVMI 334
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 147/320 (45%), Gaps = 2/320 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + PN+ T + A + + G + + G ++ + + DMYSK G
Sbjct: 252 MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGD 311
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD+M ER++ +WN I K A+ F + +G EP ITF + L +
Sbjct: 312 LQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPS 371
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG+ +H ++ ++ + S+ L+D Y KC + A+ VFDG+ K+ SW
Sbjct: 372 CAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + + + ++F +G+EP + +LSAC ++LG+ + V+
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
+ ++D+ G+ G ++AE M + + W +++G G ++
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGE 551
Query: 299 SSFEEMTSMRCEAVPNYVTL 318
E + + + YV L
Sbjct: 552 LVAERLFELEPDNPGAYVLL 571
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 346/582 (59%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+DFTF L A+ L G+Q+H LK+ + +VFVG + D YSK D+
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVG 296
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F EMPE + ++N I++ G+ K + D F L+ T + F L+ +
Sbjct: 297 KLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL 356
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L++GRQ+H + G + V N LVD Y KCN A+ +FD I K+ V W +M+
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YVQ + E G +F RR GV +S+L ACA +A + LGR +H++ +++
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++ GSAL+D Y KCG + DA +F +MPERN V WNA+I YA G+ D L+SF++M
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM- 535
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ P+ V+ + VLSACS G VE+ + F SMT Y + P EHY +VD+L R G
Sbjct: 536 -IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNG 594
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLLS 424
D A +++ EMP P+ +W ++LN+CR++ EL + AAD LF + D D+ ++ +S
Sbjct: 595 RFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMS 654
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A G+W+ V+K M+D G++K SW+ +K++ H+F A D SH +I +
Sbjct: 655 NIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKIN 714
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +EM+ GY PDT AL+DV+E K+ + +HSE+ A+AF L+ P G PI + KNLR
Sbjct: 715 ALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLR 774
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+A K IS IV RE+IVRD++RFH F DG CSC DYW
Sbjct: 775 ACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 6/393 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I P+ T L L Q+H +K G +++ V S D Y KT
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F M ++ T+N+ ++ G + AI+ F+ L +G +P TF A L+A
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ G+Q+HGF++++ F NV V N L+D+Y K ++V +F + + + +S+
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISY 310
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y N + + +F + + + F +++LS L +GR +H A+
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V +ALVDMY KC ++A+ F+ + ++ V W A+I Y +G + ++
Sbjct: 371 VGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINV 430
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + MR VP + T +L AC+ ++ G ++ +S+ ++ G + ++D
Sbjct: 431 FSD---MRRTGVPADQATFASILRACANLASISLGRQL-HSLLIRSGFMSNVYSGSALLD 486
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A + EMP R ++S W AL++A
Sbjct: 487 TYAKCGCMTDAIKSFGEMPERNSVS-WNALISA 518
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K G A ++FD M ER +W I + + K A + ++RR G EPD +T
Sbjct: 86 KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+ + + Q+H +++ G++ N+ VCN LVD Y K + + LA +F +++K+
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKD 205
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V++ S++ Y E ++FL G++P DF +++LSA + + G+ VH
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K N+FVG+AL+D Y K + + F +MPE + + +N +I YA G
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKE 325
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYA 355
+ F ++ R + +LS + + + G +I ++T+ + E+
Sbjct: 326 SFDLFRKLQFTRFDR--RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-- 381
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+VD+ + A +I + + T+ W A+++A GK E G
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYVQKGKHEEG 427
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + + TF + +A + L G+QLH+L ++SG + +V+ G + D Y+K G
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K F EMPERN +WNA IS G +++F + ++G +PD ++F + L+A
Sbjct: 494 MTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553
Query: 121 CSDCSLLQ 128
CS C ++
Sbjct: 554 CSHCGFVE 561
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 125 SLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L+ G +H V N N ++ + K ++ A+ +FDG++++ VSW +
Sbjct: 52 NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y+Q+ + + +++ RR G+EP + ++LS + + +H +K
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E N+ V ++LVD Y K + A F M ++ V +N+++ GY+++G + A+ F E
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ + + P+ T +LSA + G ++ + LK ++D +
Sbjct: 232 LHNSGIK--PSDFTFAALLSAAVGLDDTKFGQQV-HGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 364 AGLVDRAYEIIKEMPMRPTIS 384
VD ++ EMP IS
Sbjct: 289 HDQVDEVGKLFXEMPELDGIS 309
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 353/582 (60%), Gaps = 5/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN TF + A S+ G+Q+ +++G D V + MY+K G DA
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+++ ++N+ WNA I+ V + NA+ F L + G +P+ TF + LN C
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG+ +H ++++G + ++ V N LV + C ++ AK +F+ + ++ VSW +++
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+VQ+ + + F + G++P + +L+ACA L GR +HA+ +A +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDC 648
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ VG+ L+ MY KCGSI+DA F+K+P++N+ W ++I GYA G AL F +M
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQ 708
Query: 306 SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E V P+++T V LSAC+ AG +E+G+ F SM ++ I+P EHY C+VDL GRA
Sbjct: 709 Q---EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRA 764
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GL++ A E I +M + P VWGALL AC+V+ EL AA +LDPND+G V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++AA G W+E +RK M D G+ K G SWI V ++H F + D +H + EI A L
Sbjct: 825 NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELE 884
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L EM+ GY+PDT + L+DVE+ EK + +HSE++A+ +GL+ PP PI I+KNLR
Sbjct: 885 RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A KFIS I R++I RD+NRFH F DG CSC D+W
Sbjct: 945 VCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 208/398 (52%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ F L +A + GK++HA + G +++VG + MY+K G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++FD + RN+ +W A I+ GR A F + +G EP+ +TF + L A
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGA 422
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS S L+ G+Q+ ++ +G+ + V L+ Y KC + A VF+ I +N V+W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YVQ+ + +N F +EG++P +S+L+ C LELG+ VH + +K
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK 542
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A +E ++ V +ALV M+ CG + A+ FN MP+R+LV WN II G+ G +A
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDY 602
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M + P+ +T +L+AC+ A+ +G ++ +++ + ++ +
Sbjct: 603 FKMMQESGIK--PDKITFTGLLNACASPEALTEGRRL-HALITEAAFDCDVLVGTGLISM 659
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G ++ A+++ ++P + S W +++ +G+
Sbjct: 660 YTKCGSIEDAHQVFHKLPKKNVYS-WTSMIAGYAQHGR 696
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 4/402 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ + P+ TF + A + G++L+ L LK+G D+FVG + +M+ K G
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD +P R+L TW + I+ GR K A + F + G +PD + F + L A
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+++H + G+D + V ++ Y KC + A VFD + +N VSW
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + Q+ + F G+EP S+L AC+ + L+ G+ + ++
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + V +AL+ MY KCGS++DA F K+ ++N+V WNA+I Y D AL++
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALAT 501
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + ++ PN T +L+ C + ++E G K + + +K G++ +V +
Sbjct: 502 FQAL--LKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSM 558
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
G + A + +MP R +S W ++ +GK ++
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKNQVA 599
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 193/364 (53%), Gaps = 4/364 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G++++ KSG D+F+ + +MY+K G A ++FD+M E+++ +WN + V
Sbjct: 129 GERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A + + +PD TF + LNAC+D + GR+L+ ++++G+D ++ V
Sbjct: 189 HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L++ + KC ++G A VFD + ++ V+W SM+ ++ + C +F EGV
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P S+L AC LE G+ VHA + + I+VG+A++ MY KCGS++DA
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + RN+V W A+I G+A G D A F +M E PN VT + +L ACS
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE--PNRVTFMSILGACSSP 426
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+++G +I ++ G ++ + + G + A+ + +++ + + W A
Sbjct: 427 SALKRGQQI-QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484
Query: 389 LLNA 392
++ A
Sbjct: 485 MITA 488
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 3 RECISPNDFTFPCLF---KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+E I PN TF + K+S +L + GK +H L +K+G D+ V + M+ G
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLEL---GKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A +F++MP+R+L +WN I+ V G+ + A D F ++ +G +PD ITF LN
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L GR+LH + + FD +V V GL+ Y KC + A VF + KN S
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ Y Q+ + ++F ++EGV+P LSACA +E G
Sbjct: 684 WTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK 743
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ +E + +VD++G+ G + +A E E + W A++G A Q H ++ L
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG--ACQVHLNVEL 801
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPG 350
+ E+ + E PN + +LS A + K + + L G+ KPG
Sbjct: 802 A--EKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPG 853
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%), Gaps = 9/298 (3%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T+ A L C L G +++ + +SG ++ + N L++ Y KC AK +FD +
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+K+ SW +L YVQ+ E ++ ++ V+P S+L+ACA ++ GR
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
++ + +KA + ++FVG+AL++M+ KCG I DA F+ +P R+LV W ++I G A G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A + F+ M + P+ V V +L AC+ A+E+G K+ M + G
Sbjct: 292 RFKQACNLFQRMEEEGVQ--PDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIY 348
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
++ + + G ++ A E+ + R +S W A+ + G + GRI LF
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVS-WTAM-----IAGFAQHGRIDEAFLF 400
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 23/239 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P+ TF L A ++ G++LHAL ++ DV VG MY+K G
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F ++P++N+ +W + I+ GR K A++ F +++ G +PD ITF L+A
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Query: 121 CSDCSLLQLGRQLHGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKND 177
C+ L++ G LH F F + + +VD +G+ + A + + ++ +
Sbjct: 726 CAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTA--------RREGVEPKDFMISSVLSACARIAGL 228
W ++L CQ+ L ++ ++P D + +LS AG+
Sbjct: 784 RVWGALL----------GACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGM 832
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/561 (43%), Positives = 335/561 (59%), Gaps = 3/561 (0%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P GK LH LK G D+F +MY K+ DA K+FDEMPERN ++ I
Sbjct: 54 PSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQG 113
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
R AI+ F+ L R P+ TF + L AC+ L LG Q+H +++ G +
Sbjct: 114 YAESVRFLEAIELFVRLHREV-LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 172
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V N L+D Y KC + + +F +NDV+W +++V +VQ + E ++FL
Sbjct: 173 VFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLE 232
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
V+ + SS L ACA +A LE G +H++ VK + +I V +AL+DMY KCGSI+D
Sbjct: 233 YRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKD 292
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + F+ M +++ V WNA+I GY+ G AL F++M E P+ +T V VLSAC
Sbjct: 293 ARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE--TEVKPDKLTFVGVLSAC 350
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ AG +++G F SM +GI+P EHY C+V LLGR G +D+A ++I E+P +P++ V
Sbjct: 351 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W ALL AC ++ ELGRI+A + +++P D HVLLSNM+A RW+ VRK MK
Sbjct: 411 WRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKR 470
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK G SWI + +H F DTSH I ML L + K AGYIP+ N L D
Sbjct: 471 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLD 530
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
VE+EEK + HSE++AL+FG+I P G PIRI KNLRIC DCH+A K IS +V RE++
Sbjct: 531 VEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIV 590
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F +G CSC DYW
Sbjct: 591 VRDINRFHHFQEGLCSCGDYW 611
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 169/345 (48%), Gaps = 14/345 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE + PN FTF + +A + + G Q+H +K G DVFV + D+Y+K G
Sbjct: 130 LHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 188
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+++ ++F E P RN TWN I V G + A+ F+N+ + +T+ + L A
Sbjct: 189 MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 248
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L+ G Q+H V++ FD ++ V N L+D Y KC + A++VFD + +++VSW
Sbjct: 249 CASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSW 308
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-----VH 235
+M+ Y + ++F + V+P VLSACA L+ G++ +
Sbjct: 309 NAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 368
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
++ C+E + +V + G+ G + A +++P + +++ W A++G
Sbjct: 369 DHGIEPCIEHY----TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDI 424
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
++ S + + M + +V L + + R +V K MK
Sbjct: 425 ELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMK 469
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 208 VEPKDF---MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V P +F ++ L C + G+ +H +K ++F + L++MY K +
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F++MPERN + + +I GYA + L + E + E +PN T VL A
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYA---ESVRFLEAIELFVRLHREVLPNQFTFASVLQA 147
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ + G +I + +K G+ ++D+ + G ++ + E+ E P R ++
Sbjct: 148 CATMEGLNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT 206
Query: 385 VWGALL 390
W ++
Sbjct: 207 -WNTVI 211
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/596 (41%), Positives = 352/596 (59%), Gaps = 12/596 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ I PN TFPC K+ SAL +GKQ H AL G D+FV + DMYSK G
Sbjct: 73 MRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGK 132
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFI---------NLRRTGGEPDL 111
+A +FDE+P RN+ TW + I+ V A+ F N G D
Sbjct: 133 LSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDS 192
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
+ + L+ACS S + +HG ++ G D + V N L+D Y KC EV L++ VFD
Sbjct: 193 VAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDD 252
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLEL 230
+ +K+ VSW SM+ VY QN + ++F + G + + +S++L ACA L +
Sbjct: 253 MAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRV 312
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G +H +K N+ + ++++DMY KCG + A AF+ M E+N+ W A+I GY
Sbjct: 313 GMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGM 372
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G A AL F +M + PNY+T + VL+ACS AG +E+G + F +M+ +Y ++PG
Sbjct: 373 HGFAREALDVFYQM--IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPG 430
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHY C+VDLLGRAG + AY +IK M +R +WG+LL ACR++ EL I+A LF
Sbjct: 431 VEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELF 490
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
KLDP++ G +VLL+N++A GRW++ + +R +KD G+ K G S + +K R+H+F D
Sbjct: 491 KLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGD 550
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
H ++ +I L +L +++ AGY+P+ L+DV+EEEK V HSEK+A+AFG++
Sbjct: 551 KEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMN 610
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I + KNLR+CGDCH+ K IS IV RE+IVRD RFH F DG CSC DYW
Sbjct: 611 SIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 178/369 (48%), Gaps = 24/369 (6%)
Query: 56 SKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFC 115
+ T L +K FD ++ +WN+ I+ GG ++ AF +R+ +P+ TF
Sbjct: 30 TNTNLTTLFNKYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFP 86
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ +CS L G+Q H + GF+ ++ V + L+D Y KC ++ A+V+FD I +
Sbjct: 87 CAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRR 146
Query: 176 NDVSWCSMLVVYVQNYEEENGCQM---FLTARRE------GVEPKDFMISSVLSACARIA 226
N V+W S++ YVQN + + FL + E G + SVLSAC+R++
Sbjct: 147 NIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVS 206
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
+ VH VA+K ++ + V + L+D Y KCG + + F+ M E+++V WN++I
Sbjct: 207 NKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIA 266
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
YA G + A F M N VTL +L AC+ GA+ GM + +K G
Sbjct: 267 VYAQNGLSTDAFEVFHGMLKA-GGGKYNEVTLSTLLLACAHEGALRVGM-CLHDQVIKMG 324
Query: 347 IKPGAEHYACVVDLL---GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
++D+ G+A + A++ +KE +R W A++ YG R
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRS----WTAMIAG---YGMHGFAR 377
Query: 404 IAADNLFKL 412
A D +++
Sbjct: 378 EALDVFYQM 386
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 19/275 (6%)
Query: 167 VVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+F+ D+ DV SW S++ + + + F R+ ++P + +C+ +
Sbjct: 36 TLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L G+ H A+ E ++FV SAL+DMY KCG + +A + F+++P RN+V W ++I
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155
Query: 286 GGYAHQGHADMALSSFEEMTSMRCE-------AVPNYVTLVCVLSACSRAG--AVEKGMK 336
GY A AL F+E + E + V ++ VLSACSR AV +G+
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV- 214
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ + +K G+ ++D + G V + ++ +M + +S W +++ VY
Sbjct: 215 --HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVS-WNSMI---AVY 268
Query: 397 GKPELGRIAADNLFKLDPNDSG--NHVLLSNMFAA 429
+ L A + + G N V LS + A
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLA 303
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 353/582 (60%), Gaps = 5/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN TF + A S+ G+Q+ +++G D V + MY+K G DA
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+++ ++N+ WNA I+ V + NA+ F L + G +P+ TF + LN C
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG+ +H ++++G + ++ V N LV + C ++ AK +F+ + ++ VSW +++
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+VQ+ + + F + G++P + +L+ACA L GR +HA+ +A +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDC 648
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ VG+ L+ MY KCGSI+DA F+K+P++N+ W ++I GYA G AL F +M
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQ 708
Query: 306 SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E V P+++T V LSAC+ AG +E+G+ F SM ++ I+P EHY C+VDL GRA
Sbjct: 709 Q---EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRA 764
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GL++ A E I +M + P VWGALL AC+V+ EL AA +LDPND+G V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++AA G W+E +RK M D G+ K G SWI V ++H F + D +H + EI A L
Sbjct: 825 NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELE 884
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L EM+ GY+PDT + L+DVE+ EK + +HSE++A+ +GL+ PP PI I+KNLR
Sbjct: 885 RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A KFIS I R++I RD+NRFH F DG CSC D+W
Sbjct: 945 VCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 208/398 (52%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ F L +A + GK++HA + G +++VG + MY+K G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++FD + RN+ +W A I+ GR A F + +G EP+ +TF + L A
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGA 422
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS S L+ G+Q+ ++ +G+ + V L+ Y KC + A VF+ I +N V+W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YVQ+ + +N F +EG++P +S+L+ C LELG+ VH + +K
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK 542
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A +E ++ V +ALV M+ CG + A+ FN MP+R+LV WN II G+ G +A
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDY 602
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M + P+ +T +L+AC+ A+ +G ++ +++ + ++ +
Sbjct: 603 FKMMQESGIK--PDKITFTGLLNACASPEALTEGRRL-HALITEAAFDCDVLVGTGLISM 659
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G ++ A+++ ++P + S W +++ +G+
Sbjct: 660 YTKCGSIEDAHQVFHKLPKKNVYS-WTSMITGYAQHGR 696
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 4/402 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ + P+ TF + A + G++L+ L LK+G D+FVG + +M+ K G
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD +P R+L TW + I+ GR K A + F + G +PD + F + L A
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+++H + G+D + V ++ Y KC + A VFD + +N VSW
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + Q+ + F G+EP S+L AC+ + L+ G+ + ++
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + V +AL+ MY KCGS++DA F K+ ++N+V WNA+I Y D AL++
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALAT 501
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + ++ PN T +L+ C + ++E G K + + +K G++ +V +
Sbjct: 502 FQAL--LKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSM 558
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
G + A + +MP R +S W ++ +GK ++
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKNQVA 599
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 193/364 (53%), Gaps = 4/364 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G++++ KSG D+F+ + +MY+K G A ++FD+M E+++ +WN + V
Sbjct: 129 GERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A + + +PD TF + LNAC+D + GR+L+ ++++G+D ++ V
Sbjct: 189 HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L++ + KC ++G A VFD + ++ V+W SM+ ++ + C +F EGV
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P S+L AC LE G+ VHA + + I+VG+A++ MY KCGS++DA
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + RN+V W A+I G+A G D A F +M E PN VT + +L ACS
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE--PNRVTFMSILGACSSP 426
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+++G +I ++ G ++ + + G + A+ + +++ + + W A
Sbjct: 427 SALKRGQQI-QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484
Query: 389 LLNA 392
++ A
Sbjct: 485 MITA 488
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 3 RECISPNDFTFPCLF---KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+E I PN TF + K+S +L + GK +H L +K+G D+ V + M+ G
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLEL---GKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A +F++MP+R+L +WN I+ V G+ + A D F ++ +G +PD ITF LN
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L GR+LH + + FD +V V GL+ Y KC + A VF + KN S
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ Y Q+ + ++F ++EGV+P LSACA +E G
Sbjct: 684 WTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK 743
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ +E + +VD++G+ G + +A E E + W A++G A Q H ++ L
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG--ACQVHLNVEL 801
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPG 350
+ E+ + E PN + +LS A + K + + L G+ KPG
Sbjct: 802 A--EKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPG 853
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%), Gaps = 9/298 (3%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T+ A L C L G +++ + +SG ++ + N L++ Y KC AK +FD +
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+K+ SW +L YVQ+ E ++ ++ V+P S+L+ACA ++ GR
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
++ + +KA + ++FVG+AL++M+ KCG I DA F+ +P R+LV W ++I G A G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A + F+ M + P+ V V +L AC+ A+E+G K+ M + G
Sbjct: 292 RFKQACNLFQRMEEEGVQ--PDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIY 348
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
++ + + G ++ A E+ + R +S W A+ + G + GRI LF
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVS-WTAM-----IAGFAQHGRIDEAFLF 400
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 23/239 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P+ TF L A ++ G++LHAL ++ DV VG MY+K G
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F ++P++N+ +W + I+ GR K A++ F +++ G +PD ITF L+A
Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSA 725
Query: 121 CSDCSLLQLGRQLHGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKND 177
C+ L++ G LH F F + + +VD +G+ + A + + ++ +
Sbjct: 726 CAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTA--------RREGVEPKDFMISSVLSACARIAGL 228
W ++L CQ+ L ++ ++P D + +LS AG+
Sbjct: 784 RVWGALL----------GACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGM 832
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/594 (40%), Positives = 361/594 (60%), Gaps = 15/594 (2%)
Query: 3 RECISPNDFTFP-----CLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
R + P++F+ CL+ + L + GKQ+H +A+KSG DV V S +MYSK
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLEL---GKQVHGIAVKSGLDSDVSVANSLVNMYSK 333
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD-----LI 112
G A ++F++M +L +WN+ IS+ + +++ FI+L G +PD I
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T AC LL G+Q+H +++GFD ++ V +G++D Y KC ++ A +VF+ I
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+DV+W SM+ V N E+ +++ R+ V P ++ ++++ A + + LE GR
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+HA +K + FVG++LVDMY KCG+I+DA F KM RN+ WNA++ G A G
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+A+ A++ F+ M S E P+ V+ + +LSACS AG + + +SM YGI+P E
Sbjct: 574 NAEEAVNLFKSMKSHGIE--PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIE 631
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY+C+VD LGRAGLV A ++I+ MP + + S+ ALL ACR+ G E G+ A LF L
Sbjct: 632 HYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFAL 691
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P DS +VLLSN++AA RW++ RK MK +KK G SWI VKN +H+F D S
Sbjct: 692 EPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRS 751
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H + I + ++ + ++ GY+PDT F L DVE+EEK + +HSEK+A+A+GLI+ P
Sbjct: 752 HPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTP 811
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+CGDCH+A K+IS + RE+++RD NRFH F DG CSC DYW
Sbjct: 812 ASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 213/475 (44%), Gaps = 50/475 (10%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L + + + H + GK HA + SG D F+ + MYSK G A ++FD PER+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 76 LATWNAYISNAVLG-----GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
L TWNA + G + + F LR + G +T L C + L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+HG+ ++ G + +V V LV+ Y KC + A+++FD + +++ V W ML YVQ
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSAC--ARIAGLELGRSVHAVAVKACVEGNIF 248
E+ Q+F R G+ P +F + +L+ C A LELG+ VH +AVK+ ++ ++
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V ++LV+MY K G A FN M +L+ WN++I A + +++ F ++
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382
Query: 309 CEAVPNY-----VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ P++ +TL AC +++G +I ++ +K G + ++D+ +
Sbjct: 383 LK--PDHFTLASITLATAAKACGCLVLLDQGKQI-HAHAIKAGFDSDLHVNSGILDMYIK 439
Query: 364 --------------------------AGLVD--------RAYEIIKEMPMRPTISVWGAL 389
+G VD R Y +++ + P + L
Sbjct: 440 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 499
Query: 390 LNACRVYGKPELGRIAADNLFKLD-PNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+ A E GR N+ KLD +D L +M+A G E+A + K+M
Sbjct: 500 IKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P+++TF L KASS + G+QLHA +K + D FVG S DMY+K G
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F +M RN+A WNA + G + A++ F +++ G EPD ++F L+A
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
CS L + LH G + + + LVD G+ V A V + +
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 656
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 27/249 (10%)
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L LG+ HA V + G+ F+ + L+ MY KCGS+ A F+ PER+LV WNAI+G
Sbjct: 93 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152
Query: 288 YA-----HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
YA + G+A L F + + +TL VL C +G + + +
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRA--SLGSTTRMTLAPVLKLCLNSGCLWAAEGV-HGYA 209
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+K G++ +V++ + G + A + M R + +W +L G +LG
Sbjct: 210 IKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVV-LWNMMLK-----GYVQLG 263
Query: 403 -RIAADNLFK------LDPNDSGNHVLLSN-MFAATGRWEEADLVRKEMKDVGIKKGAGC 454
A LF L P++ ++L+ ++A T E + K++ + +K G
Sbjct: 264 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE----LGKQVHGIAVKSGLD- 318
Query: 455 SWISVKNRI 463
S +SV N +
Sbjct: 319 SDVSVANSL 327
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/558 (43%), Positives = 343/558 (61%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G QLHA LK G V + ++YSKT L + ++FDE P+++ TW++ IS
Sbjct: 44 GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P A+ F + G PD + + AC +G+ +H V++G+ +V V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC E+G A+ +FD + ++N VSW M+ Y Q + +F A E V
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ DF SSV+ C+ LELG+ +H + +K + + FVGSAL+ +Y KCG I+ A
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++P RNL WN+++ A H FEEM ++ + PN+++ + VL ACS A
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK--PNFISFLSVLYACSHA 341
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VEKG + ++S+ YGI+P EHYA +VDLLGRAG + A +IK+MPMRPT SVWGA
Sbjct: 342 GLVEKGRE-YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR++ E+ AD + ++D + SG HVLLSN +AA GR+EEA +RK ++D G+
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ N++H F A D SH + EI L +L EEM+ AGY+ DT+F L V+
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDG 520
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK + +HSE++A+AFGLI PPG PIR+ KNLR+CGDCH+A KF+S GR +IVRD
Sbjct: 521 EEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Query: 569 NNRFHRFWDGYCSCSDYW 586
NNRFHRF DG CSC DYW
Sbjct: 581 NNRFHRFEDGKCSCGDYW 598
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 174/358 (48%), Gaps = 23/358 (6%)
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
L + E + C L + + L+ G QLH +++ G V + L++ Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ VFD K+ +W S++ + QN Q F +GV P D + S A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C + ++G+SVH +AVK ++FVGS+LVDMY KCG I DA F++MPERN+V W
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSW 195
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
+ +I GYA AL+ F++ ++ + N T V+ CS + +E G K+ + +
Sbjct: 196 SGMIYGYAQLDDGVEALTLFKQ--ALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLIHGL 252
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-------R 394
LK + + ++ L + G+++ AY++ E+P R + +W ++L AC R
Sbjct: 253 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQR 311
Query: 395 VYGK-PELGRIAADNLFKLDPNDSGNHVLLSNMFAAT--GRWEEADLVRKEMKDVGIK 449
V+G E+G + + PN LS ++A + G E+ M+D GI+
Sbjct: 312 VFGLFEEMGNVG------MKPNFIS---FLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+D +P KA L GK +H LA+K+G DVFVG S DMY+K G
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FDEMPERN+ +W+ I A+ F + + TF + +
Sbjct: 177 IGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRV 236
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L+LG+ +HG ++ FD + V + L+ Y KC + A VFD I +N W
Sbjct: 237 CSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLW 296
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML+ Q+ + +F G++P SVL AC+ +E GR ++
Sbjct: 297 NSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD 356
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS 299
+E ++LVD+ G+ G +Q+A +MP R W A++ G +MA
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + M + +V L +A R
Sbjct: 417 VADRILEMDSSSSGLHVLLSNAYAAAGR 444
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 346/582 (59%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+DFTF L A+ L G+Q+H LK+ + +VFVG + D YSK D+
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVG 296
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F EMPE + ++N I++ G+ K + D F L+ T + F L+ +
Sbjct: 297 KLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSL 356
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L++GRQ+H + G + V N LVD Y KCN A+ +FD I K+ V W +M+
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YVQ + E G +F RR GV +S+L ACA +A + LGR +H++ +++
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++ GSAL+D Y KCG + DA +F +MPERN V WNA+I YA G+ D L+SF++M
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQM- 535
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ P+ V+ + VLSACS G VE+ + F SMT Y + P EHY +VD+L R G
Sbjct: 536 -IQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNG 594
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPNDSGNHVLLS 424
D A +++ EMP P+ +W ++LN+CR++ EL + AAD LF + D D+ ++ +S
Sbjct: 595 RFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMS 654
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A G+W+ V+K M+D G++K SW+ +K++ H+F A D SH +I +
Sbjct: 655 NIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKIN 714
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +EM+ GY PDT AL+DV+E K+ + +HSE+ A+AF L+ P G PI + KNLR
Sbjct: 715 ALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLR 774
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+A K IS IV RE+IVRD++RFH F DG CSC DYW
Sbjct: 775 ACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 6/393 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I P+ T L L Q+H +K G +++ V S D Y KT
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F M ++ T+N+ ++ G + AI+ F+ L +G +P TF A L+A
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ G+Q+HGF++++ F NV V N L+D+Y K ++V +F + + + +S+
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISY 310
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y N + + +F + + + F +++LS L +GR +H A+
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V +ALVDMY KC ++A+ F+ + ++ V W A+I Y +G + ++
Sbjct: 371 VGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINV 430
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + MR VP + T +L AC+ ++ G ++ +S+ ++ G + ++D
Sbjct: 431 FSD---MRRTGVPADQATFASILRACANLASISLGRQL-HSLLIRSGFMSNVYSGSALLD 486
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A + EMP R ++S W AL++A
Sbjct: 487 TYAKCGCMTDAIKSFGEMPERNSVS-WNALISA 518
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K G A ++FD M ER +W I + + K A + ++RR G EPD +T
Sbjct: 86 KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+ + + Q+H +++ G++ N+ VCN LVD Y K + + LA +F +++K+
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKD 205
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V++ S++ Y E ++FL G++P DF +++LSA + + G+ VH
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K N+FVG+AL+D Y K + + F +MPE + + +N +I YA G
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKE 325
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYA 355
+ F ++ R + +LS + + + G +I ++T+ + E+
Sbjct: 326 SFDLFRKLQFTRFDR--RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN-- 381
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+VD+ + A +I + + T+ W A+++A GK E G
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYVQKGKHEEG 427
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + + TF + +A + L G+QLH+L ++SG + +V+ G + D Y+K G
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K F EMPERN +WNA IS G +++F + ++G +PD ++F + L+A
Sbjct: 494 MTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553
Query: 121 CSDCSLLQ 128
CS C ++
Sbjct: 554 CSHCGFVE 561
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 125 SLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L+ G +H V N N ++ + K ++ A+ +FDG++++ VSW +
Sbjct: 52 NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y+Q+ + + +++ RR G+EP + ++LS + + +H +K
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E N+ V ++LVD Y K + A F M ++ V +N+++ GY+++G + A+ F E
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ + + P+ T +LSA + G ++ + LK ++D +
Sbjct: 232 LHNSGIK--PSDFTFAALLSAAVGLDDTKFGQQV-HGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 364 AGLVDRAYEIIKEMPMRPTIS 384
VD ++ EMP IS
Sbjct: 289 HDQVDEVGKLFYEMPELDGIS 309
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/581 (39%), Positives = 347/581 (59%), Gaps = 3/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P + + A + + +HA +S D F+ S MY K G DA
Sbjct: 56 LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R++ +W I+ P AI ++ R P+ TF + L A C
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+G Q+H V+ +D +V V + L+D Y +C ++ +A +VFD ++ KN+VSW +++
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ + + E F +R G F SS+ SA ARI LE GR VHA +K+ +
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
FVG+ ++ MY K GS+ DA F++M +R+LV WN ++ A G A++ FEE+
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+C N +T + VL+ACS G V++G K ++ M Y ++P +HY VDLLGRAG
Sbjct: 356 --KCGIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDHYVSFVDLLGRAG 412
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+ A + +MPM PT +VWGALL ACR++ ++G+ AAD++F+LDP+D+G VLL N
Sbjct: 413 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYN 472
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+TG+W +A VRK MK G+KK CSW+ ++N +H+F A D +H ++ +I M +
Sbjct: 473 IYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEE 532
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ +K AGY+P+T L + E+E+ T++ +HSEKIALAF LI +P G IRI KN+RI
Sbjct: 533 INMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRI 592
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCHSAFK++S + RE++VRD NRFH F +G CSC DYW
Sbjct: 593 CGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 4/340 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF L KA+ A G+Q+HALA+K DV+VG + DMY++
Sbjct: 152 MLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 211
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD + +N +WNA I+ + + F ++R G T+ + +A
Sbjct: 212 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 271
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ GR +H L++SG V N ++ Y K + A+ VFD + ++ V+W
Sbjct: 272 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 331
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Q + F R+ G++ SVL+AC+ ++ G+ +
Sbjct: 332 NTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD 391
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
V+ I + VD+ G+ G +++A I KMP E W A++G +A M
Sbjct: 392 YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQY 451
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + + + + V L + ++ + A V K MK
Sbjct: 452 AADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMK 491
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/587 (41%), Positives = 351/587 (59%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FT K+ + L GK +H ALK D++VG + ++Y+K+G
Sbjct: 196 MRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGE 255
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLN 119
+A + F+EMP+ +L W+ IS + K A++ F +R++ P+ TF + L
Sbjct: 256 IAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQ 315
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ LL LG Q+H +++ G D NV V N L+D Y KC E+ + +F G +KN+V+
Sbjct: 316 ACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVA 375
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++V YVQ + E +F ++P + SSVL A A + LE GR +H++ +
Sbjct: 376 WNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTI 435
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + V ++L+DMY KCG I DA + F+KM +++ V WNA+I GY+ G AL+
Sbjct: 436 KTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALN 495
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M + + PN +T V VLSACS AG ++KG F SM YGI+P EHY C+V
Sbjct: 496 LFDMMQ--QSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVW 553
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+G D A ++I E+P +P++ VW ALL AC ++ +LG++ A + +++P D
Sbjct: 554 LLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDAT 613
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLLSNM+A RW+ VRK MK +KK G SW+ + +H F DTSH I
Sbjct: 614 HVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLI 673
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
AML L ++ + AGY+PD + L DVE++EK + HSE++ALAFGLI IP G IRI
Sbjct: 674 FAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRI 733
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+ K +S IV RE+++RD NRFH F G CSC DYW
Sbjct: 734 IKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 203/405 (50%), Gaps = 9/405 (2%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F F L K ++ + T +HA K G D FVG + D YS G D A ++F
Sbjct: 103 NQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVF 162
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D + +++ +W ++ ++++ F +R G P+ T A L +C+ +
Sbjct: 163 DGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFK 222
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
+G+ +HG ++ +D ++ V L++ Y K E+ A+ F+ + + + W M+ Y
Sbjct: 223 VGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYA 282
Query: 189 QNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ + + ++F R+ V P +F +SVL ACA + L LG +H+ +K ++ N+
Sbjct: 283 QSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNV 342
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
FV +AL+D+Y KCG I+++ F E+N V WN II GY G + AL+ F M +
Sbjct: 343 FVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGL 402
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P VT VL A + A+E G +I +S+T+K + ++D+ + G +
Sbjct: 403 DIQ--PTEVTYSSVLRASASLVALEPGRQI-HSLTIKTMYNKDSVVANSLIDMYAKCGRI 459
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
D A +M + +S W AL+ ++G LG + A NLF +
Sbjct: 460 DDARLTFDKMDKQDEVS-WNALICGYSIHG---LG-MEALNLFDM 499
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 177/388 (45%), Gaps = 3/388 (0%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P GK LH LK G D+F + Y G +DA K+FDEMP N ++
Sbjct: 19 PNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQG 78
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ + A + L R G E + F L L +H ++ + G +
Sbjct: 79 FSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQAD 138
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V L+D Y C V A+ VFDGI K+ VSW M+ Y +NY E+ +F R
Sbjct: 139 AFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRI 198
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G P +F IS+ L +C + ++G+SVH A+K C + +++VG AL+++Y K G I +
Sbjct: 199 MGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAE 258
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A+ F +MP+ +L+ W+ +I YA + AL F M VPN T VL AC
Sbjct: 259 AQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV-VVPNNFTFASVLQAC 317
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ + G +I +S LK G+ ++D+ + G ++ + ++ + ++
Sbjct: 318 ASLVLLNLGNQI-HSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVA- 375
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLD 413
W ++ G E N+ LD
Sbjct: 376 WNTIIVGYVQLGDGEKALNLFSNMLGLD 403
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/632 (37%), Positives = 365/632 (57%), Gaps = 50/632 (7%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R +SP+ + + A ++L + G+Q+H +++SG + DVFVG + DMY+K G +
Sbjct: 357 RHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKME 416
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAI-------------------------- 96
+A+K+F M +++ +WNA ++ GR ++A+
Sbjct: 417 EANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYA 476
Query: 97 ---------DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS--GFDG- 144
D F + G P+++T + L+AC L G++ H + ++ DG
Sbjct: 477 QRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGP 536
Query: 145 -----NVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGC 197
++ V NGL+D Y KC +A+ +FD + D++ V+W M+ Y Q+ + N
Sbjct: 537 DPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNAL 596
Query: 198 QMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-NIFVGSALV 254
Q+F + + ++P DF +S L ACAR+A L GR VHA ++ +FV + L+
Sbjct: 597 QLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLI 656
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY K G + A+I F+ MP+RN V W +++ GY G + AL F+EM + VP+
Sbjct: 657 DMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMR--KVPLVPD 714
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
+T + VL ACS +G V+ G+ F M+ +G+ PG EHYAC+VDL GRAG + A ++I
Sbjct: 715 GITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLI 774
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
EMPM PT VW ALL+ACR++ ELG AA+ L +L+ + G++ LLSN++A RW+
Sbjct: 775 NEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWK 834
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
+ +R MK GIKK GCSWI + + F D SH ++ +I L L + +KA G
Sbjct: 835 DVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIG 894
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y+P T+FAL+DV++EEK + HSEK+ALA+G++ + P PIRITKNLRICGDCHSA
Sbjct: 895 YVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAIT 954
Query: 555 FISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+IS I+ E+I+RD++RFH F +G CSC YW
Sbjct: 955 YISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 203/450 (45%), Gaps = 64/450 (14%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ +TFP +FKA + L G LHA +SG +VFV + MY K G A
Sbjct: 256 TPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHN 315
Query: 67 MFDEMPER---NLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACS 122
MFD++ R +L +WN+ +S + A+ F + R PD+I+ L AC+
Sbjct: 316 MFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACA 375
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ GRQ+HGF +RSG +V V N +VD Y KC ++ A VF + K+ VSW +
Sbjct: 376 SLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNA 435
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVE--------------------------------- 209
M+ Y Q E+ +F E +E
Sbjct: 436 MVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCG 495
Query: 210 --PKDFMISSVLSACARIAGLELGRSVHAVAVKACVE--------GNIFVGSALVDMYGK 259
P + S+LSAC + L G+ H A+K + ++ V + L+DMY K
Sbjct: 496 SRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAK 555
Query: 260 CGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
C S + A F+ + +R++V W +IGGYA G A+ AL F M M PN T
Sbjct: 556 CQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFT 615
Query: 318 LVCVLSACSRAGAVEKGMKI-------FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
L C L AC+R A+ G ++ FY + + C++D+ ++G VD A
Sbjct: 616 LSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVAN-------CLIDMYSKSGDVDTA 668
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ MP R +S W +L+ ++G+ E
Sbjct: 669 QIVFDNMPQRNAVS-WTSLMTGYGMHGRGE 697
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 186/406 (45%), Gaps = 59/406 (14%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN I A+ G P++ + ++ G PD TF AC++ S L LG LH +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---NDVSWCSMLVVYVQNYEEEN 195
RSGF NV VCN +V YGKC + A +FD + + + VSW S++ Y+ +
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346
Query: 196 GCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F R + P + ++L ACA +A GR VH ++++ + ++FVG+A+V
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR------ 308
DMY KCG +++A F +M +++V WNA++ GY+ G + ALS FE MT
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVV 466
Query: 309 ---------------CEAV------------PNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
CEA+ PN VTLV +LSAC GA+ G K +
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG-KETHCY 525
Query: 342 TLKY-----GIKPGAEHYACVVDLLGRAGLVD-----RAYEIIKEM-----PMRPTISVW 386
+K+ G PGA+ DL GL+D ++ E+ ++M P + W
Sbjct: 526 AIKFILNLDGPDPGAD------DLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTW 579
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
++ +G +FK+D + N LS A R
Sbjct: 580 TVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 357/586 (60%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ T + A++ + + + GK +H A+++G V + + DMYSK G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD M ++ + +WN+ + V G P+ AI F + G +P +T L+A
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+ G+ +H F+ + ++SV N L+ Y KC V +A +F+ + + VSW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN F + G++P F + SV+ A A ++ + +H + ++
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+C++ NIFV +ALVDMY KCG+I A F+ + +R+++ WNA+I GY G AL
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M E PN +T + V+SACS +G V++G++ F SM YG++P +HY +VDL
Sbjct: 539 FDKMKKGAVE--PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A++ I+ MP+ P I+V+GA AC+++ E+G AA LF+L+P++ G H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+T +W + VRK M+ G+KK GCS + ++N +H F + T+H ++ I
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L E+KAAGY+PDTN L DVE++ + + HSEK+A+AFGL+ PG I +
Sbjct: 717 AFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A K+IS + GRE+IVRD RFH F +G CSC DYW
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 210/421 (49%), Gaps = 12/421 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L K GK++H + + +VF +MY+K
Sbjct: 138 MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ 197
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA KMFD MPER+L +WN I+ G K A++ + ++ G PD IT L A
Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D LL +G+ +HG+ +R+GF V++ L D Y KC V A+++FDG+ K VSW
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQN E E +F EG++P I L ACA + LE G+ VH +
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I V ++L+ MY KC + A FN + R V WNA+I GYA G AL+
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNC 437
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM S+ + P+ T+V V+ A + +V + K + + ++ + +VD+
Sbjct: 438 FSEMKSLGMK--PDSFTMVSVIPALAEL-SVTRHAKWIHGLIIRSCLDKNIFVTTALVDM 494
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-----DPN 415
+ G + A ++ + R I+ W A+++ YG LGR A D K+ +PN
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVIT-WNAMIDG---YGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 416 D 416
D
Sbjct: 551 D 551
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 195/390 (50%), Gaps = 12/390 (3%)
Query: 19 ASSALHIPVTGKQLHA---LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
A+ L + + K+LH L +K+G ++ ++SK G ++A ++F+ + ++
Sbjct: 52 AAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
A ++ + + A+ +R +P + F L C D + L+ G+++HG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
L+ + F NV G+V+ Y KC ++ A +FD + +++ VSW +++ + QN +
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
++ L + EG P + +VL A A + L +G+S+H A++A + + +AL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY KCGS++ A + F+ M ++ +V WN+++ GY G + A++ FE+M + P
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID--PTG 349
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
VT++ L AC+ G +E+G K + + + ++ + + VD A +I
Sbjct: 350 VTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ R +S W A+ + G + GR++
Sbjct: 409 NLNGRTHVS-WNAM-----ILGYAQNGRVS 432
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/586 (40%), Positives = 346/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E PN +F + S GK +HA + +G + DV V + MY G
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGS 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD+M R++ +W I ++A F ++ G +PD IT+ +NA
Sbjct: 314 IEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINA 373
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L L R++H +VR+GF ++ V LV Y KC + A+ VFD + ++ VSW
Sbjct: 374 CASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSW 433
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YV+N E + F +R VEP ++L+AC + L+LG ++ A+K
Sbjct: 434 SAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK 493
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + +I VG+AL++M K GSI+ A F M +R++V WN +IGGY+ G+A AL
Sbjct: 494 ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDL 553
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M R PN VT V VLSACSRAG VE+G + F + GI P E Y C+VDL
Sbjct: 554 FDRMLKERFR--PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDL 611
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A +I MP++P S+W LL ACR+YG ++ AA+ +P D +
Sbjct: 612 LGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVY 671
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LS+M+AA G WE VRK M+ G++K GC+WI V+ ++H F +D SH + EI
Sbjct: 672 VQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIY 731
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L +K GYIP T L++V E+EK + +HSEK+A+A+G++++P G PIRI
Sbjct: 732 AELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIF 791
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA KFIS + GRE+I RD +RFH F +G CSC DYW
Sbjct: 792 KNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 210/417 (50%), Gaps = 6/417 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ TF + A S+ GK+ HA +K G + D +G + MY K G
Sbjct: 153 MVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGS 212
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD + +R+++T+N I G + A F +++ G +P+ I+F + L+
Sbjct: 213 MDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDG 272
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L G+ +H + +G +V V L+ Y C + A+ VFD + ++ VSW
Sbjct: 273 CSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSW 332
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N E+ +F T + EG++P +++ACA A L L R +H+ V+
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A ++ V +ALV MY KCG+I+DA F+ M R++V W+A+IG Y G + A +
Sbjct: 393 AGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFET 452
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M E P+ VT + +L+AC GA++ GM+I Y+ +K + ++++
Sbjct: 453 FHLMKRNNVE--PDVVTYINLLNACGHLGALDLGMEI-YTQAIKADLVSHIPVGNALINM 509
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPN 415
+ G ++RA I + M R ++ W ++ ++G D + K PN
Sbjct: 510 NVKHGSIERARYIFENMVQRDVVT-WNVMIGGYSLHGNAREALDLFDRMLKERFRPN 565
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 187/381 (49%), Gaps = 4/381 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ LF+ L GKQ+ ++SG+ +++ + ++S G +A + FD +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+ + TWNA I+ G K A F + EP +ITF L+ACS + L+LG+
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+ H +++ GF + + LV Y K + A+ VFDG+ ++ ++ M+ Y ++
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ E Q+F ++EG +P S+L C+ L G++VHA + + ++ V +
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
AL+ MY CGSI+ A F+KM R++V W +I GYA + + A F M +
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ- 361
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ +T + +++AC+ + + +I +S ++ G +V + + G + A
Sbjct: 362 -PDRITYIHIINACASSADLSLAREI-HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419
Query: 372 EIIKEMPMRPTISVWGALLNA 392
++ M R +S W A++ A
Sbjct: 420 QVFDAMSRRDVVS-WSAMIGA 439
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 11/319 (3%)
Query: 79 WNAYISNAVLGGRPKNAIDAFIN----LRRTGGEPDLITFCAFLNACSDCSLLQ---LGR 131
W ++ V R ++ + L R G + I ++ C +L+ LG+
Sbjct: 22 WCGFLQQPVQSARCRSIFTGQVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGK 81
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q+ +++SG N+ N L+ + C + A+ FD + +K V+W +++ Y Q
Sbjct: 82 QVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLG 141
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ +F E +EP VL AC+ AGL+LG+ HA +K + +G+
Sbjct: 142 HVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGT 201
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALV MY K GS+ A F+ + +R++ +N +IGGYA G + A F M +
Sbjct: 202 ALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFK- 260
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PN ++ + +L CS A+ G K ++ + G+ ++ + G ++ A
Sbjct: 261 -PNRISFLSILDGCSTPEALAWG-KAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGAR 318
Query: 372 EIIKEMPMRPTISVWGALL 390
+ +M +R +S W ++
Sbjct: 319 RVFDKMKVRDVVS-WTVMI 336
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/558 (43%), Positives = 342/558 (61%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G QLHA LK G V + ++YSKT L + ++FDE P+++ TW++ IS
Sbjct: 44 GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P A+ F + G PD + + AC +G+ +H V++G+ +V V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC E+G A+ +FD + ++N VSW M+ Y Q + +F A E V
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ DF SSV+ C+ LELG+ +H + +K + + FVGSAL+ +Y KCG I+ A
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++P RNL WN+++ A H FEEM ++ + PN++ + VL ACS A
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK--PNFIXFLSVLYACSHA 341
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VEKG + ++S+ YGI+P EHYA +VDLLGRAG + A +IK+MPMRPT SVWGA
Sbjct: 342 GLVEKGRE-YFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR++ E+ AD + ++D + SG HVLLSN +AA GR+EEA +RK ++D G+
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ N++H F A D SH + EI L +L EEM+ AGY+ DT+F L V+
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDG 520
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK + +HSE++A+AFGLI PPG PIR+ KNLR+CGDCH+A KF+S GR +IVRD
Sbjct: 521 EEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Query: 569 NNRFHRFWDGYCSCSDYW 586
NNRFHRF DG CSC DYW
Sbjct: 581 NNRFHRFEDGKCSCGDYW 598
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 174/358 (48%), Gaps = 23/358 (6%)
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
L + E + C L + + L+ G QLH +++ G V + L++ Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ VFD K+ +W S++ + QN Q F +GV P D + S A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C + ++G+SVH +AVK ++FVGS+LVDMY KCG I DA F++MPERN+V W
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSW 195
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
+ +I GYA AL+ F++ ++ + N T V+ CS + +E G K+ + +
Sbjct: 196 SGMIYGYAQLDDGVEALTLFKQ--ALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLIHGL 252
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-------R 394
LK + + ++ L + G+++ AY++ E+P R + +W ++L AC R
Sbjct: 253 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR-NLGLWNSMLIACAQHAHTQR 311
Query: 395 VYGK-PELGRIAADNLFKLDPNDSGNHVLLSNMFAAT--GRWEEADLVRKEMKDVGIK 449
V+G E+G + + PN LS ++A + G E+ M+D GI+
Sbjct: 312 VFGLFEEMGNVG------MKPNFI---XFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+D +P KA L GK +H LA+K+G DVFVG S DMY+K G
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FDEMPERN+ +W+ I A+ F + + TF + +
Sbjct: 177 IGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRV 236
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L+LG+ +HG ++ FD + V + L+ Y KC + A VFD I +N W
Sbjct: 237 CSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLW 296
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML+ Q+ + +F G++P SVL AC+ +E GR ++
Sbjct: 297 NSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRD 356
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS 299
+E ++LVD+ G+ G +Q+A +MP R W A++ G +MA
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + M + +V L +A R
Sbjct: 417 VADRILEMDSSSSGLHVLLSNAYAAAGR 444
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/582 (40%), Positives = 344/582 (59%), Gaps = 4/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
+ P+ +T + KA+S+L ++ KQ+H A+K + D FV + D YS+ +A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ +F E +L WNA ++ + F + + G D T C
Sbjct: 472 EILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ G+Q+H + ++SG+D ++ V +G++D Y KC ++ A+ FD I +DV+W +M+
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
++N EEE +F R GV P +F I+++ A + + LE GR +HA A+K
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FVG++LVDMY KCGSI DA F ++ N+ WNA++ G A G L F++M
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
S+ + P+ VT + VLSACS +G V + K SM YGIKP EHY+C+ D LGRA
Sbjct: 711 KSLGIK--PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GLV +A +I+ M M + S++ LL ACRV G E G+ A L +L+P DS +VLLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
NM+AA +W+E L R MK +KK G SWI VKN+IHIF D S+ + I +
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+ ++K GY+P+T+F L DVEEEEK + +HSEK+A+AFGL++ PP PIR+ KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A K+I+ + RE+++RD NRFHRF DG CSC DYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 190/391 (48%), Gaps = 6/391 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ TF + + + G+Q+H +ALK G + V S +MY K A +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL-L 127
D M ER+L +WN+ I+ G A+ F+ L R G +PD T + L A S L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
L +Q+H ++ + V L+D Y + + A+++F+ + + V+W +M+ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGY 492
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+++ ++F ++G DF +++V C + + G+ VHA A+K+ + ++
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+V S ++DMY KCG + A+ AF+ +P + V W +I G G + A F +M M
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+P+ T+ + A S A+E+G +I ++ LK +VD+ + G +
Sbjct: 613 --GVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
D AY + K + M I+ W A+L +G+
Sbjct: 670 DDAYCLFKRIEMM-NITAWNAMLVGLAQHGE 699
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 156/324 (48%), Gaps = 10/324 (3%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
N +S + G+ + F ++ + E D +TF L L LG+Q+H ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
G D ++V N L++ Y K + G A+ VFD + +++ +SW S++ QN E +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 200 FLTARREGVEPKDFMISSVLSACARIA-GLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F+ R G++P + ++SVL A + + GL L + VH A+K + FV +AL+D Y
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGY--AHQGHADMALSSFEEMTSMRCEAVPNYV 316
+ +++AEI F + +LV WNA++ GY +H GH + L + R +
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD----F 518
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TL V C A+ +G ++ ++ +K G + ++D+ + G + A
Sbjct: 519 TLATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 377 MPMRPTISVWGALLNACRVYGKPE 400
+P+ P W +++ C G+ E
Sbjct: 578 IPV-PDDVAWTTMISGCIENGEEE 600
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 148/346 (42%), Gaps = 10/346 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ +DFT +FK L GKQ+HA A+KSG D++V DMY K G
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A FD +P + W IS + G + A F +R G PD T A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L+ GRQ+H ++ + V LVD Y KC + A +F I N +W
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVA 238
+MLV Q+ E + Q+F + G++P VLSAC+ +GL E + + ++
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH-SGLVSEAYKHMRSMH 746
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
++ I S L D G+ G ++ AE M E + + ++ QG +
Sbjct: 747 GDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETG 806
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSR------AGAVEKGMKI 337
++ + YV L + +A S+ A + KG K+
Sbjct: 807 KRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 852
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
FL S L LG+ H ++ + + N L+ Y KC + A+ VFD + D++
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 177 DVSWCSMLVVYVQNYE--EENGCQMFL---TARREGVEPKDFMISSVLSACARIAGLELG 231
VSW S+L Y Q+ E EN Q FL R++ V +S +L C +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
S H A K ++G+ FV ALV++Y K G +++ ++ F +MP R++V WN ++ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 292 GHADMA--LSSFEEMTSMRCEAVPNYVTL 318
G + A LSS + + PN +TL
Sbjct: 225 GFKEEAIDLSSAFHSSGLN----PNEITL 249
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 131/324 (40%), Gaps = 40/324 (12%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYI----- 83
GK HA L + + F+ + MYSK G A ++FD+MP+R+L +WN+ +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 84 SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
S+ + + A F LR+ +T L C + HG+ + G D
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
G+ V LV+ Y K +V KV+F+ + ++ V W ML Y++ +E +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
G+ P + L ARI+ G A VK+ GN S+
Sbjct: 238 HSSGLNPNEI----TLRLLARIS----GDDSDAGQVKSFANGN------------DASSV 277
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+EI F N + Y H G L F +M E + VT + +L+
Sbjct: 278 --SEIIFR----------NKGLSEYLHSGQYSALLKCFADMVESDVEC--DQVTFILMLA 323
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGI 347
+ ++ G ++ + M LK G+
Sbjct: 324 TAVKVDSLALGQQV-HCMALKLGL 346
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/582 (41%), Positives = 347/582 (59%), Gaps = 7/582 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P F F +A ++L GKQ+H LALK G ++FVG + DMYSK G DA K+
Sbjct: 104 PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 163
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP ++ +W A I G + A+ AF + D C+ L AC
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 223
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSML 184
+ GR +H +V+ GF+ ++ V N L D Y K ++ A VF ID +N VS+ ++
Sbjct: 224 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG--IDSECRNVVSYTCLI 281
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV+ + E G +F+ RR+G+EP +F SS++ ACA A LE G +HA +K +
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FV S LVDMYGKCG ++ A AF+++ + + WN+++ + G A+ FE M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM 401
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ PN +T + +L+ CS AG VE+G+ FYSM YG+ PG EHY+CV+DLLGRA
Sbjct: 402 VDRGVK--PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 459
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A E I MP P W + L ACR++G E+G++AA+ L KL+P +SG VLLS
Sbjct: 460 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A +WE+ VR M+D +KK G SW+ V + H+F A+D SH R + I L
Sbjct: 520 NIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLD 579
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +++KAAGY+P T+ D+++ K + HSE+IA+AF LI++P G PI + KNLR
Sbjct: 580 TLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLR 639
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCHSA KFIS + GR++IVRDN+RFH F DG CSC DYW
Sbjct: 640 VCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 191/378 (50%), Gaps = 8/378 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLHAL + +G F+ +MYSK G D A K+FD MP+RNL +W A IS
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ AI F +R G P F + + AC+ +++G+Q+H ++ G + V
Sbjct: 84 NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L D Y KC + A VF+ + K++VSW +M+ Y + E E F E V
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
++ S L AC + + GRSVH+ VK E +IFVG+AL DMY K G ++ A
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263
Query: 269 AFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F E RN+V + +I GY + LS F E+ E PN T ++ AC+
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE--PNEFTFSSLIKACAN 321
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+E+G ++ ++ +K + +VD+ G+ GL+++A + E+ PT W
Sbjct: 322 QAALEQGTQL-HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWN 379
Query: 388 ALLNACRVYGKPELGRIA 405
+L++ V+G+ LG+ A
Sbjct: 380 SLVS---VFGQHGLGKDA 394
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+ G+QLH L+ +G+ + N LV+ Y KC E+ A +FD + +N VSW +M+
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
QN + + F R G P F SS + ACA + +E+G+ +H +A+K +
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+FVGS L DMY KCG++ DA F +MP ++ V W A+I GY+ G + AL +F++M
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E + L L AC A + G + +S +K G + + D+ +AG
Sbjct: 201 E--EVTIDQHVLCSTLGACGALKACKFGRSV-HSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 367 VDRAYEII 374
++ A +
Sbjct: 258 MESASNVF 265
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ V+ A+ L G+ +HA+ + A F+ + LV+MY KCG + A F+ MP
Sbjct: 8 LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR-CEAVPNYVTLVCVLSACSRAGAVEK 333
+RNLV W A+I G + A+ +F MR C VP + AC+ G++E
Sbjct: 68 QRNLVSWTAMISGLSQNSKFSEAIRTF---CGMRICGEVPTQFAFSSAIRACASLGSIEM 124
Query: 334 GMKIFYSMTLKYGIKPGAEHY--ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G K + + LK+GI G+E + + + D+ + G + A ++ +EMP + +S W A+++
Sbjct: 125 G-KQMHCLALKFGI--GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMID 180
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
G+ E +A + + HVL S + A
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTID-QHVLCSTLGA 216
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR+ I PN+FTF L KA + G QLHA +K D FV DMY K GL
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A + FDE+ + WN+ +S G K+AI F + G +P+ ITF + L
Sbjct: 360 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 419
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG------LVDFYGKCNEVGLAKVVFDGI-I 173
CS L++ G L F D V G ++D G+ + AK + +
Sbjct: 420 CSHAGLVEEG--LDYFY---SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 174 DKNDVSWCSML 184
+ N WCS L
Sbjct: 475 EPNAFGWCSFL 485
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/560 (41%), Positives = 341/560 (60%), Gaps = 5/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ HA ++ G D+ +MYSK L D A K F+EMP ++L +WN I
Sbjct: 62 GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ I ++R G + T + L C+ C++L+ QLH F +++ D N
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC-MQLHAFSIKAAIDSNCF 180
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+ Y KC+ + A +F+ + +KN V+W SM+ YVQN E +F A+ G
Sbjct: 181 VGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMG 240
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ FMISS +SACA +A L G+ VHA++ K+ NI+V S+L+DMY KCG I++A
Sbjct: 241 FDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAY 300
Query: 268 IAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F + E R++V WNA+I G+A A A+ FE+M P+ VT VCVL+ACS
Sbjct: 301 LVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQR--GFFPDDVTYVCVLNACS 358
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G E+G K F M ++ + P HY+C++D+LGRAGLV +AY++I+ MP T S+W
Sbjct: 359 HMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMW 418
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
G+LL +C++YG E IAA LF+++PN++GNH+LL+N++AA +W+E RK +++
Sbjct: 419 GSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRET 478
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
++K G SWI +KN+IH F + +H + +I A L L E+K Y DT+ L+DV
Sbjct: 479 DVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDV 538
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EE K + HHSEK+A+ FGL+ +P +PIRI KNLRICGDCH+ K +S RE+IV
Sbjct: 539 EENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIV 598
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH F DG+CSC ++W
Sbjct: 599 RDTNRFHHFKDGFCSCGEFW 618
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 143/275 (52%), Gaps = 3/275 (1%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L C+ GR H ++R G + ++ N L++ Y KC+ V A+ F+ + K+
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ QN E+ ++ + +REG +F ISSVL CA + +HA
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
++KA ++ N FVG+AL+ +Y KC SI+DA F MPE+N V W++++ GY G +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F M + P ++ +SAC+ + +G ++ ++++ K G +
Sbjct: 229 ALLIFRNAQLMGFDQDPFMIS--SAVSACAGLATLIEGKQV-HAISHKSGFGSNIYVSSS 285
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++D+ + G + AY + + + +I +W A+++
Sbjct: 286 LIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMIS 320
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
F A + L + GKQ+HA++ KSG +++V S DMY+K G +A +F
Sbjct: 246 FMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQG 305
Query: 71 MPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+ E R++ WNA IS R A+ F +++ G PD +T+ LNACS L +
Sbjct: 306 VLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEE 365
Query: 130 GRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKNDVSWCSML 184
G++ +VR +V + ++D G+ GL +D I + W S+L
Sbjct: 366 GQKYFDLMVRQHNLSPSVLHYSCMIDILGR---AGLVHKAYDLIERMPFNATSSMWGSLL 422
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/582 (41%), Positives = 347/582 (59%), Gaps = 7/582 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P F F +A ++L GKQ+H LALK G ++FVG + DMYSK G DA K+
Sbjct: 39 PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 98
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP ++ +W A I G + A+ AF + D C+ L AC
Sbjct: 99 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 158
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSML 184
+ GR +H +V+ GF+ ++ V N L D Y K ++ A VF ID +N VS+ ++
Sbjct: 159 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG--IDSECRNVVSYTCLI 216
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV+ + E G +F+ RR+G+EP +F SS++ ACA A LE G +HA +K +
Sbjct: 217 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 276
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FV S LVDMYGKCG ++ A AF+++ + + WN+++ + G A+ FE M
Sbjct: 277 EDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM 336
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ PN +T + +L+ CS AG VE+G+ FYSM YG+ PG EHY+CV+DLLGRA
Sbjct: 337 VDRGVK--PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 394
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A E I MP P W + L ACR++G E+G++AA+ L KL+P +SG VLLS
Sbjct: 395 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 454
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A +WE+ VR M+D +KK G SW+ V + H+F A+D SH R + I L
Sbjct: 455 NIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLD 514
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +++KAAGY+P T+ D+++ K + HSE+IA+AF LI++P G PI + KNLR
Sbjct: 515 TLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLR 574
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCHSA KFIS + GR++IVRDN+RFH F DG CSC DYW
Sbjct: 575 VCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 167/336 (49%), Gaps = 8/336 (2%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
MP+RNL +W A IS + AI F +R G P F + + AC+ +++G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+Q+H ++ G + V + L D Y KC + A VF+ + K++VSW +M+ Y +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E E F E V ++ S L AC + + GRSVH+ VK E +IFVG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+AL DMY K G ++ A F E RN+V + +I GY + LS F E+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
E PN T ++ AC+ A+E+G ++ ++ +K + +VD+ G+ GL+++
Sbjct: 241 E--PNEFTFSSLIKACANQAALEQGTQL-HAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
A + E+ PT W +L++ V+G+ LG+ A
Sbjct: 298 AIQAFDEIG-DPTEIAWNSLVS---VFGQHGLGKDA 329
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR+ I PN+FTF L KA + G QLHA +K D FV DMY K GL
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A + FDE+ + WN+ +S G K+AI F + G +P+ ITF + L
Sbjct: 295 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG------LVDFYGKCNEVGLAKVVFDGI-I 173
CS L++ G L F D V G ++D G+ + AK + +
Sbjct: 355 CSHAGLVEEG--LDYFY---SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409
Query: 174 DKNDVSWCSML 184
+ N WCS L
Sbjct: 410 EPNAFGWCSFL 420
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/572 (40%), Positives = 349/572 (61%), Gaps = 4/572 (0%)
Query: 8 PNDFTF-PCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
P D F L K + + + G+ +HA L+S HD+ +G + +MY+K G ++A K
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F++MP+R+ TW IS RP +A+ F + R G P+ T + + A +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G QLHGF V+ GFD NV V + L+D Y + + A++VFD + +NDVSW +++
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ + E ++F R+G P F +S+ AC+ LE G+ VHA +K+ +
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
F G+ L+DMY K GSI DA F+++ +R++V WN+++ YA G A+ FEEM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR- 355
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R PN ++ + VL+ACS +G +++G +Y + K GI P A HY VVDLLGRAG
Sbjct: 356 -RVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
++RA I+EMP+ PT ++W ALLNACR++ ELG AA+++F+LDP+D G HV+L N+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A+ GRW +A VRK+MK+ G+KK CSW+ ++N IH+F A D H + EI ++
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K GY+PDT+ + V+++E+ + +HSEKIALAF L+ PPG I I KN+R+C
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
GDCH+A K S +VGRE+IVRD NRFH F D
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 4/340 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SPN+FT + KA++A G QLH +K G +V VG + D+Y++ GL
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD + RN +WNA I+ + A++ F + R G P ++ + A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+ +H ++++SG N L+D Y K + A+ +FD + ++ VSW
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S+L Y Q+ + F RR G+ P + SVL+AC+ L+ G + + K
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ + +VD+ G+ G + A +MP E W A++ + ++
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ E + + + +V L + ++ R A V K MK
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 351/612 (57%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A+SAL G+Q+H ++ G F DMY+K GL DA
Sbjct: 145 VRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAK 204
Query: 66 KMFDEMPERNLA-------------------------------TWNAYISNAVLGGRPKN 94
++FDEM +N+ TW ++ G
Sbjct: 205 RVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSE 264
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+D F +R G D TF + L AC + + G+Q+H + +R+ +DGN+ V + LVD
Sbjct: 265 ALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVD 324
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + LA+ VF + KN +SW +M+V Y QN E ++F + +G++P DF
Sbjct: 325 MYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFT 384
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ SV+S+CA +A LE G H +A+ + + I V SALV +YGKCGSI+DA F++MP
Sbjct: 385 LGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMP 444
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ V + A++ GYA G A + FE+M + PN VT + VLSACSR+G VEKG
Sbjct: 445 FHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVK--PNGVTFIGVLSACSRSGLVEKG 502
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F+SM +GI +HY C++DL R+G + A E I++MP P W LL+ACR
Sbjct: 503 CSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACR 562
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G E+G+ AA+NL K DP + ++VLL +M A+ G W E L+R+ M+D +KK GC
Sbjct: 563 LRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGC 622
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI KNR+HIF A D SH + I L L +M GY PD + L+DV + EK+
Sbjct: 623 SWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHM 682
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ +HSEK+A+AFGLI +P +PIR+ KNLR+C DCH+A KFIS I GR+++VRD RFH+
Sbjct: 683 LSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 742
Query: 575 FWDGYCSCSDYW 586
F +G CSC D+W
Sbjct: 743 FSNGICSCGDFW 754
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 189/395 (47%), Gaps = 42/395 (10%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++F + + L D D++F MP+R+ ++NA I+ G P A A+ L
Sbjct: 75 NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134
Query: 104 RTGG-------EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
R P IT + A S LGRQ+H ++R GF + LVD Y
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194
Query: 157 GKCNEVGLAKVVFD-------------------------------GIIDKNDVSWCSMLV 185
K +G AK VFD ++D++ ++W +M+
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
QN + +F R EGV + S+L+AC +A E G+ +HA ++ +G
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
NIFVGSALVDMY KC SI+ AE F +M +N++ W A+I GY G + A+ F EM
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 374
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + PN TL V+S+C+ ++E+G + F+ M L G++P + +V L G+ G
Sbjct: 375 TDGIK--PNDFTLGSVISSCANLASLEEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ A+ + EMP +S + AL++ +GK +
Sbjct: 432 SIEDAHRLFDEMPFHDQVS-YTALVSGYAQFGKAK 465
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 13/345 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + + +TF + A AL GKQ+HA +++ ++FVG + DMYSK
Sbjct: 272 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRS 331
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M +N+ +W A I G + A+ F ++ G +P+ T + +++
Sbjct: 332 IRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISS 391
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+ G Q H + SG ++V + LV YGKC + A +FD + + VS+
Sbjct: 392 CANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSY 451
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ Y Q + + +F +GV+P VLSAC+R +E G S H++
Sbjct: 452 TALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQ 511
Query: 240 KACVEGNIFVG---SALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHAD 295
G + + + ++D+Y + G +++AE +MP + + W ++ +G +
Sbjct: 512 D---HGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDME 568
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSAC----SRAGAVEKGMK 336
+ + E + + +YV L+C + A S + +GM+
Sbjct: 569 IGKWAAENLLKTDPQNPASYV-LLCSMHASKGEWSEVALLRRGMR 612
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P ++++ +L+A AR L L R + A + N+F +AL+ + D +
Sbjct: 43 PPTYVLNHLLTAYARSGRLPLARRL----FDAMPDPNLFTRNALLSALAHARLLPDMDRL 98
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-------PNYVTLVCVL 322
F MP+R+ V +NA+I G++ G A ++ + +R EAV P+ +T+ ++
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRAL--LREEAVVDGARVRPSRITMSGMV 156
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
A S G G ++ + ++ G A ++ +VD+ + GL+ A + EM ++
Sbjct: 157 MAASALGDRALGRQV-HCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNV 215
Query: 383 I 383
+
Sbjct: 216 V 216
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/582 (41%), Positives = 347/582 (59%), Gaps = 7/582 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P F F +A ++L GKQ+H LALK G ++FVG + DMYSK G DA K+
Sbjct: 104 PTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 163
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP ++ +W A I G + A+ AF + D C+ L AC
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 223
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSML 184
+ GR +H +V+ GF+ ++ V N L D Y K ++ A VF ID +N VS+ ++
Sbjct: 224 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG--IDSECRNVVSYTCLI 281
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV+ + E G +F+ RR+G+EP +F SS++ ACA A LE G +HA +K +
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ FV S LVDMYGKCG ++ A AF+++ + + WN+++ + G A+ FE M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERM 401
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ PN +T + +L+ CS AG VE+G+ FYSM YG+ PG EHY+CV+DLLGRA
Sbjct: 402 VDRGVK--PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRA 459
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A E I MP P W + L ACR++G E+G++AA+ L KL+P +SG VLLS
Sbjct: 460 GRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A +WE+ VR M+D +KK G SW+ V + H+F A+D SH R + I L
Sbjct: 520 NIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLD 579
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +++KAAGY+P T+ D+++ K + HSE+IA+AF LI++P G PI + KNLR
Sbjct: 580 XLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLR 639
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCHSA KFIS + GR++IVRDN+RFH F DG CSC DYW
Sbjct: 640 VCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 190/378 (50%), Gaps = 8/378 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLHAL + +G F+ +MYSK G D A K+FD MP+RNL +W A IS
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ AI F +R G P F + + AC+ +++G+Q+H ++ G + V
Sbjct: 84 NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L D Y KC + A VF+ + K++VSW +M+ Y + E E F E V
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
++ S L AC + + GRSVH+ VK E +IFVG+AL DMY K G ++ A
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263
Query: 269 AFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F E RN+V + +I GY + LS F E+ E PN T ++ AC+
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE--PNEFTFSSLIKACAN 321
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+E+G ++ ++ +K + +VD+ G+ GL++ A + E+ PT W
Sbjct: 322 QAALEQGTQL-HAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWN 379
Query: 388 ALLNACRVYGKPELGRIA 405
+L++ V+G+ LG+ A
Sbjct: 380 SLVS---VFGQHGLGKDA 394
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+ G+QLH L+ +G+ + N LV+ Y KC E+ A +FD + +N VSW +M+
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
QN + + F R G P F SS + ACA + +E+G+ +H +A+K +
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+FVGS L DMY KCG++ DA F +MP ++ V W A+I GY+ G + AL +F++M
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E + L L AC A + G + +S +K G + + D+ +AG
Sbjct: 201 E--EVTIDQHVLCSTLGACGALKACKFGRSV-HSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 367 VDRAYEII 374
++ A +
Sbjct: 258 MESASNVF 265
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ V+ A+ L G+ +HA+ + A F+ + LV+MY KCG + A F+ MP
Sbjct: 8 LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR-CEAVPNYVTLVCVLSACSRAGAVEK 333
+RNLV W A+I G + A+ +F MR C VP + AC+ G++E
Sbjct: 68 QRNLVSWTAMISGLSQNSKFSEAIRTF---CGMRICGEVPTQFAFSSAIRACASLGSIEM 124
Query: 334 GMKIFYSMTLKYGIKPGAEHY--ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G K + + LK+GI G+E + + + D+ + G + A ++ +EMP + +S W A+++
Sbjct: 125 G-KQMHCLALKFGI--GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMID 180
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
G+ E +A + + HVL S + A
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTID-QHVLCSTLGA 216
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR+ I PN+FTF L KA + G QLHA +K D FV DMY K GL
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A + FDE+ + WN+ +S G K+AI F + G +P+ ITF + L
Sbjct: 360 LEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTG 419
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG------LVDFYGKCNEVGLAKVVFDGI-I 173
CS L++ G L F D V G ++D G+ + AK + +
Sbjct: 420 CSHAGLVEEG--LDYFY---SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 174 DKNDVSWCSML 184
+ N WCS L
Sbjct: 475 EPNAFGWCSFL 485
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/583 (40%), Positives = 355/583 (60%), Gaps = 6/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDA 64
P+ FT + A + + + G+Q H L +KSG DV VGCS DMY+K G DDA
Sbjct: 143 PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDA 202
Query: 65 DKMFDEMPERNLATWNAYISNAVL-GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+FD MP N+ +W A I+ V GG + AI+ F+ + + +P+ TF + L AC++
Sbjct: 203 RKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACAN 262
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S + LG Q++ +V+ V N L+ Y +C + A+ FD + +KN VS+ ++
Sbjct: 263 LSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTI 322
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y ++ E ++F G F +S+LS + I + G +H+ +K+
Sbjct: 323 VNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGF 382
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N+ + +AL+ MY +CG+I+ A FN+M + N++ W ++I G+A G A AL +F +
Sbjct: 383 KSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHK 442
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN VT + VLSACS G + +G+K F SM +++GI P EHYACVVDLLGR
Sbjct: 443 M--LEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGR 500
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+G ++ A E++ MP + V L ACRV+G +LG+ AA+ + + DP+D ++LL
Sbjct: 501 SGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILL 560
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A+ G+WEE +RK+MK+ + K AGCSWI V+N++H F DTSH + EI L
Sbjct: 561 SNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDEL 620
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++K GYIP T+F L+DVEEE+K + HSEKIA+A+G I+ PIR+ KNL
Sbjct: 621 DQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNL 680
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+AFK+ S + +E+++RD NRFH F DG CSC+DYW
Sbjct: 681 RVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 213/400 (53%), Gaps = 18/400 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PN++ F +F+A S GK + LK+G DV VGC+ DM+ K G + A
Sbjct: 40 PNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAY 99
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD MP+RN+ TW I+ G ++A+D F+++ +G PD T ++AC++
Sbjct: 100 KVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMG 159
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCS 182
LL LGRQ H +++SG D +V V LVD Y KC V A+ VFD + N +SW +
Sbjct: 160 LLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTA 219
Query: 183 MLVVYVQNYEEENGC-----QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
++ YVQ+ GC ++FL + V+P F SSVL ACA ++ + LG V+A+
Sbjct: 220 IITGYVQS----GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + VG++L+ MY +CG++++A AF+ + E+NLV +N I+ YA +++ A
Sbjct: 276 VVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEA 335
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F E+ N T +LS S GA+ KG +I +S LK G K +
Sbjct: 336 FELFNEIEGAGTGV--NAFTFASLLSGASSIGAIGKGEQI-HSRILKSGFKSNLHICNAL 392
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + R G ++ A+++ EM IS W +++ +G
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVIS-WTSMITGFAKHG 431
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 151/278 (54%), Gaps = 9/278 (3%)
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+R+L +W+A IS + AI AF ++ G P+ F ACS+ + LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 133 LHGFLVRSG-FDGNVSVCNGLVDFYGKCN-EVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+ GFL+++G F+ +V V L+D + K N ++ A VFD + D+N V+W M+ + Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +FL G P F +S V+SACA + L LGR H + +K+ ++ ++ VG
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 251 SALVDMYGKC---GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM-ALSSFEEMTS 306
+LVDMY KC GS+ DA F++MP N++ W AII GY G D A+ F EM
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM-- 241
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + PN+ T VL AC+ + G ++ Y++ +K
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQV-YALVVK 278
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 1/270 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTF + KA + L G+Q++AL +K VG S MYS+ G ++A
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENAR 305
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++N ++ + A + F + G + TF + L+ S
Sbjct: 306 KAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIG 365
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+H +++SGF N+ +CN L+ Y +C + A VF+ + D N +SW SM+
Sbjct: 366 AIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMIT 425
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ + F GV P + +VLSAC+ + + G + ++ V+ +
Sbjct: 426 GFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIV 485
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ + +VD+ G+ G +++A N MP
Sbjct: 486 PRMEHYACVVDLLGRSGHLEEAMELVNSMP 515
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/583 (40%), Positives = 352/583 (60%), Gaps = 3/583 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E PN +TF + K ++ GK +H +KSG D + S ++Y+K G +
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY 244
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+F E+PER++ +W A I+ V G + + F + G P++ TF + L +CS
Sbjct: 245 ACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSS 303
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S + LG+Q+H +V++ DGN V LVD Y K + A+ +F+ +I ++ +W +
Sbjct: 304 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVI 363
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y Q+ + E + F+ +REGV+P +F ++S LS C+RIA L+ GR +H++A+KA
Sbjct: 364 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 423
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
G++FV SALVDMY KCG ++DAE+ F+ + R+ V WN II GY+ G AL +FE
Sbjct: 424 SGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEA 483
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + VP+ VT + VLSACS G +E+G K F S++ YGI P EHYAC+VD+LGR
Sbjct: 484 M--LDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 541
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG I+EM + + +W +L AC+++G E G AA LF+L+P N++LL
Sbjct: 542 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 601
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SNMFAA G W++ VR M G+KK GCSW+ V ++H+F + D SH + EI L
Sbjct: 602 SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKL 661
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
L +++ + GY P+T+ L++V + EK + +HSE++ALAF L++ IRI KNL
Sbjct: 662 QDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNL 721
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RICGDCH K IS I +E++VRD N FH F +G CSC ++W
Sbjct: 722 RICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 201/399 (50%), Gaps = 7/399 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I N F F L A+++L G+ +HA K G D+ + + MY KT
Sbjct: 81 MRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQS 140
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ + F M NLA+ N +S I L G EP++ TF + L
Sbjct: 141 VENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKT 200
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+ +HG +++SG + + + N LV+ Y KC A VF I +++ VSW
Sbjct: 201 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 260
Query: 181 CSMLVVYV-QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+++ +V + Y +G ++F EG P + S+L +C+ ++ ++LG+ VHA V
Sbjct: 261 TALITGFVAEGY--GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV 318
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++GN FVG+ALVDMY K ++DAE FN++ +R+L W I+ GYA G + A+
Sbjct: 319 KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M R PN TL LS CSR ++ G ++ +SM +K G + +VD
Sbjct: 379 CFIQM--QREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVD 435
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ + G V+ A + + R T+S W ++ +G+
Sbjct: 436 MYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQHGQ 473
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 169/326 (51%), Gaps = 2/326 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E +PN +TF + ++ S+L GKQ+HA +K+ + FVG + DMY+K
Sbjct: 282 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 341
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+ +F+ + +R+L W ++ G+ + A+ FI ++R G +P+ T + L+
Sbjct: 342 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L GRQLH +++G G++ V + LVD Y KC V A+VVFDG++ ++ VSW
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ Y Q+ + + F EG P + VLSAC+ + +E G+ ++++
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 521
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ I + +VD+ G+ G + E +M N++ W ++G G+ +
Sbjct: 522 IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGE 581
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ ++ + E NY+ L + +A
Sbjct: 582 RAAMKLFELEPEIDSNYILLSNMFAA 607
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 159/344 (46%), Gaps = 4/344 (1%)
Query: 37 LKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
+K+G D + S ++Y K A ++ +EMP +++ WN +S+A + A+
Sbjct: 16 IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAV 75
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
F +R T + F + ++A + G +H + + GF+ ++ + N V Y
Sbjct: 76 QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMY 135
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
K V F ++ +N S ++L + + G ++ + EG EP +
Sbjct: 136 MKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFI 195
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
S+L CA L G+++H +K+ + + + ++LV++Y KCGS A F ++PER
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 255
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W A+I G+ +G+ L F +M + PN T + +L +CS V+ G +
Sbjct: 256 DVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFN--PNMYTFISILRSCSSLSDVDLGKQ 312
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+ ++ +K + +VD+ + ++ A I + R
Sbjct: 313 V-HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR 355
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/582 (41%), Positives = 341/582 (58%), Gaps = 3/582 (0%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C++P + L ++ A GKQLHA +G D + ++Y A
Sbjct: 70 CLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSA 129
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+FD +P+ N+ WN I G + A+ + + G PD TF L AC+
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
S ++ GR++H +V++G++ +V V L+D Y KC VG A+ VFD I+ ++ V W SML
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSML 249
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN + + G+ P + + + +SA A A L GR +H ++ + E
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFE 309
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +ALVDMY KCGS++ A F ++ + +V WNA+I GYA GHA AL FEEM
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM 369
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ A P+++T V VLSACS G +E+G F +M Y I P +HY C+VDLLG +
Sbjct: 370 NRV---AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHS 426
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G +D AY +I +M + P VWGALLN+C+++ ELG IA + L +L+P+D+GN+V+LS
Sbjct: 427 GRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILS 486
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A G+WE +RK M D +KK CSWI VKN++H F + DTSH + EI + L
Sbjct: 487 NIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELE 546
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
++ MK AGY P T +DVE++EK V HSE++A+AFGLI+ PPG + ITKNLR
Sbjct: 547 RVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLR 606
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IC DCH A KFIS I RE+ VRD NR+H F DG CSC DYW
Sbjct: 607 ICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/613 (39%), Positives = 350/613 (57%), Gaps = 36/613 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT--------- 58
PN++TFP +FK+ + + GKQ+HA LK G H+ FV S +MY++
Sbjct: 126 PNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLV 185
Query: 59 ----------------------GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
G D+A ++FDE+P R++ +WNA IS GR + A+
Sbjct: 186 FDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAM 245
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
F +RR P++ T + L+AC+ S LQLG + ++ G N+ + NGL+D
Sbjct: 246 AFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDM 305
Query: 156 YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
Y KC ++ A +F+ I DKN VSW M+ Y + +F + ++P D
Sbjct: 306 YVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTF 365
Query: 216 SSVLSACARIAGLELGRSVHAVAVK--ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S+L ACA + L+LG+ VHA K ++ + + ++L+DMY KCG + A+ F+ M
Sbjct: 366 LSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM 425
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++L WNA+I G+A GH D AL F MTS VP+ +T V VL+AC AG +
Sbjct: 426 NTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGF--VPDDITFVGVLTACKHAGLLSL 483
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G + F SM Y + P HY C++DL GRAGL D A ++K M M+P ++W +LL AC
Sbjct: 484 GRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGAC 543
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
R++ + EL A +LF+L+P + +VLLSN++A GRWE+ +R + D +KK G
Sbjct: 544 RIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPG 603
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I V + +H F D H ++ EI ML ++ ++ AG++PDT+ LYD++EE K
Sbjct: 604 CSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEG 663
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ PG IRI KNLR+CG+CHSA K IS I RE+I RD NRFH
Sbjct: 664 VLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFH 723
Query: 574 RFWDGYCSCSDYW 586
F DG CSC DYW
Sbjct: 724 HFKDGSCSCKDYW 736
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 42/410 (10%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSA---FDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
T KQ+H+ +K+G +H+ S F S G A +F + N WN I
Sbjct: 43 TLKQIHSQIIKTG-LHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIR 101
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P A++ ++++ +G EP+ TF + +C+ G+Q+H +++ G +
Sbjct: 102 GLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEH 161
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID---------- 174
N V L++ Y + E+ A++VFD G +D
Sbjct: 162 NAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIP 221
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGR 232
++ VSW +M+ Y Q+ E F RR V P + SVLSACA+ + L+LG
Sbjct: 222 VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGN 281
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
V + + NI + + L+DMY KCG +++A F K+ ++N+V WN +IGGY H
Sbjct: 282 WVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMS 341
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPG 350
AL F M M+ PN VT + +L AC+ GA++ G + + +K +K
Sbjct: 342 CYKEALGLFRRM--MQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMK-SMKNT 398
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++D+ + G + A I M + +++ W A+++ ++G +
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTD 447
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 163/381 (42%), Gaps = 46/381 (12%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAKVVFDGIIDK 175
L S+C LQ +Q+H ++++G + L++F ++ A +F I +
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N V W M+ + + ++ G EP ++ S+ +C +I G G+ VH
Sbjct: 92 NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K +E N FV ++L++MY + G + +A + F+K R+ V + A+I GYA +G D
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211
Query: 296 -------------------------------MALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A++ FEEM R + PN T++ VLSA
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR--RAKVTPNVSTMLSVLSA 269
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+++G+ + S G+ ++D+ + G ++ A + +++ + +S
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329
Query: 385 VWGALLNACRVYG--KPELGRIAADNLFKLDPNDSGNHVLL---SNMFAA-TGRWEEADL 438
W ++ K LG +DPND +L +N+ A G+W A
Sbjct: 330 -WNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHA-Y 387
Query: 439 VRKEMKDVGIKKGAGCSWISV 459
V K MK + K W S+
Sbjct: 388 VDKNMKSM---KNTVALWTSL 405
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKS--GQIHDVFVGCSAFDMYSKT 58
M + I PND TF + A + L GK +HA K+ + V + S DMY+K
Sbjct: 353 MMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKC 412
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A ++FD M ++LATWNA IS + G A+ F + G PD ITF L
Sbjct: 413 GDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVL 472
Query: 119 NACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
AC LL LGR+ +++ + ++D +G+ A+ + + K D
Sbjct: 473 TACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPD 532
Query: 178 VS-WCSML 184
+ WCS+L
Sbjct: 533 GAIWCSLL 540
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/583 (41%), Positives = 349/583 (59%), Gaps = 6/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDA 64
P+ FT+ + A + L + GKQLH+ ++ G DV VGCS DMY+K G DD+
Sbjct: 229 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 288
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+F++MPE N+ +W A I+ V G K AI+ F + P+ +F + L AC +
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S G Q++ + V+ G V N L+ Y + + A+ FD + +KN VS+ ++
Sbjct: 349 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 408
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N + E +F G+ F +S+LS A I + G +H +K
Sbjct: 409 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 468
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N + +AL+ MY +CG+I+ A FN+M +RN++ W ++I G+A G A AL F +
Sbjct: 469 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 528
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN +T V VLSACS G + +G K F SM ++GI P EHYAC+VDLLGR
Sbjct: 529 M--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 586
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+GL+ A E I MP+ VW LL ACRV+G ELGR AA+ + + +P+D ++LL
Sbjct: 587 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 646
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A+ G+W++ +RK MK+ + K AGCSWI V+NR+H F +TSH + +I L
Sbjct: 647 SNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQEL 706
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++K GYIPDT+F L+D+EEE+K + HSEKIA+AFGLI+ PIRI KNL
Sbjct: 707 DQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNL 766
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+A K+IS GRE++VRD+NRFH +G CSC+DYW
Sbjct: 767 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 213/398 (53%), Gaps = 14/398 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PN++ F + +A S + G+ ++ +K+G + DV VGC DM+ K +G A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD+MPERNL TW I+ G ++AID F+++ +G PD T+ + L+AC++
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCS 182
LL LG+QLH ++R G +V V LVD Y KC V ++ VF+ + + N +SW +
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 183 MLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ YVQ+ E ++ ++F + P F SSVL AC ++ G V++ AVK
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 365
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ VG++L+ MY + G ++DA AF+ + E+NLV +NAI+ GYA ++ A F
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 302 EEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
E+ T + A T +LS + GA+ KG +I + LK G K ++
Sbjct: 426 NEIADTGIGISA----FTFASLLSGAASIGAMGKGEQI-HGRLLKGGYKSNQCICNALIS 480
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G ++ A+++ EM R IS W +++ +G
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG 517
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 21/390 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ P+ T+ L K+ GK +H ++SG D V + +YSK G
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A +F+ M +R+L +W+A +S AI F+++ G P+ F A +
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 120 ACSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGK-CNEVGLAKVVFDGIIDKND 177
ACS+ + +G ++GF+V++G+ + +V V L+D + K ++G A VFD + ++N
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W M+ + Q + +FL G P F SSVLSAC + L LG+ +H+
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 256
Query: 238 AVKACVEGNIFVGSALVDMYGKC---GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
++ + ++ VG +LVDMY KC GS+ D+ F +MPE N++ W AII Y G
Sbjct: 257 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 316
Query: 295 DM-ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D A+ F +M S PN+ + VL AC G +++ Y +K G
Sbjct: 317 DKEAIELFCKMISGHIR--PNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIAS 369
Query: 354 YACV----VDLLGRAGLVD---RAYEIIKE 376
CV + + R+G ++ +A++I+ E
Sbjct: 370 VNCVGNSLISMYARSGRMEDARKAFDILFE 399
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 5/345 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN F+F + KA L P TG+Q+++ A+K G VG S MY+++G +DA
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 391
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++NA + + + A F + TG TF + L+ +
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+HG L++ G+ N +CN L+ Y +C + A VF+ + D+N +SW SM+
Sbjct: 452 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 511
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ +MF G +P + +VLSAC+ + + G + +++ + +
Sbjct: 512 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 571
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ G + +A N MP + + W ++G G+ ++ + E
Sbjct: 572 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 631
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ + Y+ L + ++ AG + +KI SM + IK
Sbjct: 632 ILEQEPDDPAAYILLSNLHAS---AGQWKDVVKIRKSMKERNLIK 673
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 10/309 (3%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR +A + + PDL T+ L +C QLG+ +H L++SG + + V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC + A+++F+G+ +K D VSW +M+ + N E FL G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGK-CGSIQDA 266
P ++ ++V+ AC+ +G ++ VK +E ++ VG L+DM+ K G + A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F+KMPERNLV W +I +A G A A+ F +M VP+ T VLSAC+
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME--LSGYVPDRFTYSSVLSACT 242
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA---GLVDRAYEIIKEMPMRPTI 383
G + G K +S ++ G+ +VD+ + G VD + ++ ++MP +
Sbjct: 243 ELGLLALG-KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 301
Query: 384 SVWGALLNA 392
S W A++ A
Sbjct: 302 S-WTAIITA 309
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/611 (41%), Positives = 347/611 (56%), Gaps = 43/611 (7%)
Query: 17 FKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAF-DMYSKTGLKDDA----DKMFDE 70
F ASS LH + G A ++ G H VG SA ++ G + A ++M +
Sbjct: 56 FVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSD 115
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
E N+ TWN +S GR ++A+ A + + G PD L+A D + +G
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVG 175
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD---------------GI--- 172
QLHG++V++G + V L+D YGKC VFD G+
Sbjct: 176 EQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRN 235
Query: 173 -----------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
I+ N VSW S++ VQN + +F + EG+EP I
Sbjct: 236 AQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTI 295
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
VL A A IA L GRS H +++ +I+VGSALVDMY KCG ++DA + F MP
Sbjct: 296 PCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPY 355
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
RN+V WNA+IGGYA G A+ A+ F M S + + P+ VT CVL ACS+AG E+G
Sbjct: 356 RNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEK--PDLVTFTCVLGACSQAGWTEEGR 413
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F M K+GI P EHYAC+V LLGRAG +D AY+II +MP P +WG+LL +CRV
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRV 473
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G L +AA+NLF+L+P ++GN+VLLSN++A+ W+ + +R MK VG+KK GCS
Sbjct: 474 HGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCS 533
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
WI +KN++H+ A D+SH I L L EM+ G+ P T++ L+DVEE+EK +
Sbjct: 534 WIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDIL 593
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+A GLI+ G P+++ KNLRICGDCH A KFIS RE+ VRD NRFH F
Sbjct: 594 SVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHF 653
Query: 576 WDGYCSCSDYW 586
DG CSC+DYW
Sbjct: 654 KDGKCSCADYW 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 37/381 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E P+ C A + G+QLH +K+G D V + DMY K G
Sbjct: 147 MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGR 206
Query: 61 KDDADKMFDEMP-----------------------------------ERNLATWNAYISN 85
D+ ++FDE E N+ +W + ++
Sbjct: 207 ADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVAC 266
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V GR A+D F ++ G EP+ +T L A ++ + L GR H F +R GF +
Sbjct: 267 CVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD 326
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ V + LVD Y KC V A+++F+ + +N VSW +M+ Y + E EN ++F + +
Sbjct: 327 IYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQS 386
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+P + VL AC++ E GRS + + K + + + +V + G+ G +
Sbjct: 387 SKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLD 446
Query: 265 DAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
DA N+MP E + W +++G G+ +A + E + + E NYV L + +
Sbjct: 447 DAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYA 506
Query: 324 ACSRAGAVEKGMKIFYSMTLK 344
+ V + + ++ LK
Sbjct: 507 SKKMWDGVNRLRDMMKTVGLK 527
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 136/350 (38%), Gaps = 70/350 (20%)
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+A CS L+L R LH +G + V + L+ Y + A+ V DG+ + V
Sbjct: 28 SALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVV 87
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEP---------------------------- 210
W +++ + + + E + R +GVEP
Sbjct: 88 GWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRM 147
Query: 211 --KDFM-----ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ F+ +S LSA + + +G +H VKA + V +AL+DMYGKCG
Sbjct: 148 HGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRA 207
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT------------------ 305
+ F++ ++ NA++ G + AL F E
Sbjct: 208 DEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACC 267
Query: 306 --------------SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
M+ E + PN VT+ CVL A + A+ G + + +L+ G
Sbjct: 268 VQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHG-RSAHCFSLRKGFHHD 326
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ +VD+ + G V A I + MP R +S W A++ ++G+ E
Sbjct: 327 IYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVS-WNAMIGGYAMHGEAE 375
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/583 (41%), Positives = 349/583 (59%), Gaps = 6/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDA 64
P+ FT+ + A + L + GKQLH+ ++ G DV VGCS DMY+K G DD+
Sbjct: 247 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 306
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+F++MPE N+ +W A I+ V G K AI+ F + P+ +F + L AC +
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S G Q++ + V+ G V N L+ Y + + A+ FD + +KN VS+ ++
Sbjct: 367 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 426
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N + E +F G+ F +S+LS A I + G +H +K
Sbjct: 427 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 486
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N + +AL+ MY +CG+I+ A FN+M +RN++ W ++I G+A G A AL F +
Sbjct: 487 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 546
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN +T V VLSACS G + +G K F SM ++GI P EHYAC+VDLLGR
Sbjct: 547 M--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 604
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+GL+ A E I MP+ VW LL ACRV+G ELGR AA+ + + +P+D ++LL
Sbjct: 605 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 664
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A+ G+W++ +RK MK+ + K AGCSWI V+NR+H F +TSH + +I L
Sbjct: 665 SNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQEL 724
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++K GYIPDT+F L+D+EEE+K + HSEKIA+AFGLI+ PIRI KNL
Sbjct: 725 DQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNL 784
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+A K+IS GRE++VRD+NRFH +G CSC+DYW
Sbjct: 785 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 213/398 (53%), Gaps = 14/398 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PN++ F + +A S + G+ ++ +K+G + DV VGC DM+ K +G A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 203
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD+MPERNL TW I+ G ++AID F+++ +G PD T+ + L+AC++
Sbjct: 204 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCS 182
LL LG+QLH ++R G +V V LVD Y KC V ++ VF+ + + N +SW +
Sbjct: 264 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 323
Query: 183 MLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ YVQ+ E ++ ++F + P F SSVL AC ++ G V++ AVK
Sbjct: 324 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 383
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ VG++L+ MY + G ++DA AF+ + E+NLV +NAI+ GYA ++ A F
Sbjct: 384 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 443
Query: 302 EEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
E+ T + A T +LS + GA+ KG +I + LK G K ++
Sbjct: 444 NEIADTGIGISA----FTFASLLSGAASIGAMGKGEQI-HGRLLKGGYKSNQCICNALIS 498
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G ++ A+++ EM R IS W +++ +G
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG 535
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 21/390 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ P+ T+ L K+ GK +H ++SG D V + +YSK G
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A +F+ M +R+L +W+A +S AI F+++ G P+ F A +
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 120 ACSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGK-CNEVGLAKVVFDGIIDKND 177
ACS+ + +G ++GF+V++G+ + +V V L+D + K ++G A VFD + ++N
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W M+ + Q + +FL G P F SSVLSAC + L LG+ +H+
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 274
Query: 238 AVKACVEGNIFVGSALVDMYGKC---GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
++ + ++ VG +LVDMY KC GS+ D+ F +MPE N++ W AII Y G
Sbjct: 275 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 334
Query: 295 DM-ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D A+ F +M S PN+ + VL AC G +++ Y +K G
Sbjct: 335 DKEAIELFCKMISGHIR--PNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIAS 387
Query: 354 YACV----VDLLGRAGLVD---RAYEIIKE 376
CV + + R+G ++ +A++I+ E
Sbjct: 388 VNCVGNSLISMYARSGRMEDARKAFDILFE 417
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 5/345 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN F+F + KA L P TG+Q+++ A+K G VG S MY+++G +DA
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 409
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++NA + + + A F + TG TF + L+ +
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+HG L++ G+ N +CN L+ Y +C + A VF+ + D+N +SW SM+
Sbjct: 470 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 529
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ +MF G +P + +VLSAC+ + + G + +++ + +
Sbjct: 530 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 589
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ G + +A N MP + + W ++G G+ ++ + E
Sbjct: 590 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 649
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ + Y+ L + ++ AG + +KI SM + IK
Sbjct: 650 ILEQEPDDPAAYILLSNLHAS---AGQWKDVVKIRKSMKERNLIK 691
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 10/309 (3%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR +A + + PDL T+ L +C QLG+ +H L++SG + + V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC + A+++F+G+ +K D VSW +M+ + N E FL G
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGK-CGSIQDA 266
P ++ ++V+ AC+ +G ++ VK +E ++ VG L+DM+ K G + A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F+KMPERNLV W +I +A G A A+ F +M VP+ T VLSAC+
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME--LSGYVPDRFTYSSVLSACT 260
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA---GLVDRAYEIIKEMPMRPTI 383
G + G K +S ++ G+ +VD+ + G VD + ++ ++MP +
Sbjct: 261 ELGLLALG-KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 319
Query: 384 SVWGALLNA 392
S W A++ A
Sbjct: 320 S-WTAIITA 327
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/617 (39%), Positives = 347/617 (56%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E + P T + +SAL G +H L+ G FVG DMY+K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 61 KDDADKMFDEMP-------------------------------ERNLATWNAYISNAVLG 89
DA ++F EM +R+ TW ++
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G A+D F +R G D TF + L AC + + G+Q+H ++ R+ ++ NV V
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVG 316
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y KC + LA+ VF + +N +SW +M+V Y QN E + F + +G++
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P DF + SV+S+CA +A LE G H +A+ + + I V +ALV +YGKCGSI+DA
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M + V W A++ GYA G A + FE+M + P+ VT + VLSACSRAG
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLK--PDGVTFIGVLSACSRAG 494
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VEKG F SM + I P +HY C++DL R+G A E IK+MP P W L
Sbjct: 495 LVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATL 554
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CR+ G E+G+ AA+NL + DP + ++VLL +M AA G+W E +R+ M+D +K
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVK 614
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCSWI KN++HIF A D SH ++ I L L +M GY PD + L+DV +
Sbjct: 615 KEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADA 674
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+K+ + HHSEK+A+AFGLI +P +PIRI KNLR+C DCH+A KFIS I GR+++VRD
Sbjct: 675 DKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDA 734
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH+F DG CSC D+W
Sbjct: 735 VRFHKFSDGTCSCGDFW 751
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 68/433 (15%)
Query: 32 LHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS------ 84
+H L LK+ Q F+ Y+K+G A ++FDEMP+ NL T NA +S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 85 --------------------NAVL-----GGRPKNAIDAFIN-LRRTGGEPDLITFCAFL 118
NA++ G P ++ + LR P IT A +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK-------------------- 158
S S LG +H ++R GF V + LVD Y K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 159 -----------CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
C + AK +F ++D++ ++W +M+ QN + +F R EG
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + S+L+AC +A E G+ +HA + E N+FVGSALVDMY KC SI+ AE
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M RN++ W A+I GY ++ A+ +F EM + P+ TL V+S+C+
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK--PDDFTLGSVISSCAN 391
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
++E+G + F+ + L G+ +V L G+ G ++ A+ + EM +S W
Sbjct: 392 LASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 449
Query: 388 ALLNACRVYGKPE 400
AL+ +GK +
Sbjct: 450 ALVTGYAQFGKAK 462
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/586 (40%), Positives = 346/586 (59%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ T + A SAL + GK++H A++SG V + + DMY+K G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD M ERN+ +WN+ I V PK A+ F + G +P ++ L+A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+ GR +H V G D NVSV N L+ Y KC EV A +F + + VSW
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ + QN + F R V+P F SV++A A ++ + +H V ++
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+C++ N+FV +ALVDMY KCG+I A + F+ M ER++ WNA+I GY G AL
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + PN VT + V+SACS +G VE G+K FY M Y I+ +HY +VDL
Sbjct: 527 FEEMQKGTIK--PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A++ I +MP++P ++V+GA+L AC+++ AA+ LF+L+P+D G H
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYH 644
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++ A WE+ VR M G++K GCS + +KN +H F + T+H + +I
Sbjct: 645 VLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIY 704
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L KL +K AGY+PDTN L VE + K + HSEK+A++FGL+ G I +
Sbjct: 705 AFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVR 763
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K+IS + GRE++VRD RFH F +G CSC DYW
Sbjct: 764 KNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/411 (31%), Positives = 214/411 (52%), Gaps = 8/411 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L K GK++H L +KSG D+F +MY+K
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A K+FD MPER+L +WN ++ G + A++ ++ +P IT + L A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S L+ +G+++HG+ +RSGFD V++ LVD Y KC + A+ +FDG++++N VSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQN + +F EGV+P D + L ACA + LE GR +H ++V+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N+ V ++L+ MY KC + A F K+ R LV WNA+I G+A G AL+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M S + P+ T V V++A + ++ K + + ++ + +VD+
Sbjct: 426 FSQMRSRTVK--PDTFTYVSVITAIAEL-SITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ G + A I M R ++ W A+++ YG G+ AA LF+
Sbjct: 483 YAKCGAIMIARLIFDMMSER-HVTTWNAMIDG---YGTHGFGK-AALELFE 528
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 6/371 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+ L K+G + F ++ + G D+A ++F+ + + ++ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
A+ F+ +R EP + F L C D + L++G+++HG LV+SGF ++
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
GL + Y KC +V A+ VFD + +++ VSW +++ Y QN +M + E ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P I SVL A + + + +G+ +H A+++ + + + +ALVDMY KCGS++ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRA 328
F+ M ERN+V WN++I Y + A+ F++M E V P V+++ L AC+
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD---EGVKPTDVSVMGALHACADL 350
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + + ++++ G+ ++ + + VD A + ++ R +S W A
Sbjct: 351 GDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS-WNA 408
Query: 389 LLNACRVYGKP 399
++ G+P
Sbjct: 409 MILGFAQNGRP 419
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
R + L+ R + + K + F + LV ++ + GS+ +A F + + V ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVP---NYVTLVCVLSACSRAGAVEKGMKIFYS 340
++ G+A D AL F M E V Y+ VC A R G G+ +
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+L G E ++ + V+ A ++ MP R +S W ++ Y +
Sbjct: 166 FSLDLFAMTGLE------NMYAKCRQVNEARKVFDRMPERDLVS-WNTIVAG---YSQNG 215
Query: 401 LGRIAAD 407
+ R+A +
Sbjct: 216 MARMALE 222
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/586 (42%), Positives = 336/586 (57%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + P+ T+ L + ++H A+++G I D VG + MY + G
Sbjct: 515 MQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGS 574
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD++ R++ TWNA I A + A+ F+ ++R G PD TF L+A
Sbjct: 575 IDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
D L+ +++H +G ++ V N LV Y KC V AK VFD ++++N +W
Sbjct: 635 NVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTW 693
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Q+ + FL REG+ P S+LSACA LE + VH AV
Sbjct: 694 TMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVS 753
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ VG+ALV MY KCGSI DA F+ M ER++ W +IGG A G AL
Sbjct: 754 AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDF 813
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M S + PN + V VL+ACS AG V++G + F SMT YGI+P EHY C+VDL
Sbjct: 814 FVKMKSEGFK--PNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDL 871
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAGL++ A I MP+ P + WGALL AC YG E+ AA KL P + +
Sbjct: 872 LGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTY 931
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++AATG+WE+ LVR M+ GI+K G SWI V NRIH F DTSH + EI
Sbjct: 932 VLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIY 991
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L E +KA GY+PDT L + ++E K + HSEK+A+ +GL+ PIR+
Sbjct: 992 AQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVY 1051
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS I GRE++ RD RFH F DG CSC DYW
Sbjct: 1052 KNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 203/395 (51%), Gaps = 12/395 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT---GKQLHALALKSGQIHDVFVGCSAFDMYSK 57
MR+EC PN+ T+ + KA PV GK++HA ++SG DV V + +MY K
Sbjct: 210 MRQECGQPNEITYLSILKACCC---PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVK 266
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G +DA +FD+M ERN+ +W I GR + A F+ ++R G P+ T+ +
Sbjct: 267 CGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSI 326
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LNA + L+ +++H V +G ++ V N LV Y K + A+VVFDG+ +++
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDI 386
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL--SACARIAGLELGRSVH 235
SW M+ Q+ + +FL +R G P S+L SA A + LE + VH
Sbjct: 387 FSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVH 446
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +A ++ +G+AL+ MY KCGSI DA + F+ M +R+++ WNA++GG A G
Sbjct: 447 KHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGH 506
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A + F +M VP+ T + +L+ A+E ++ + ++ G+ +
Sbjct: 507 EAFTVFLQMQQEGL--VPDSTTYLSLLNTHGSTDALEWVNEV-HKHAVETGLISDFRVGS 563
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ + R G +D A + ++ +R ++ W A++
Sbjct: 564 AFIHMYIRCGSIDDARLLFDKLSVRH-VTTWNAMI 597
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 270/594 (45%), Gaps = 46/594 (7%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
++ I+ + F++ + + + KQ+H +KSG +++V +Y + G
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A ++FD++ ++N+ W I G ++A+ + +R+ G+P+ IT+ + L AC
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
L+ G+++H +++SGF +V V LV+ Y KC + A+++FD ++++N +SW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ + +FL +REG P + S+L+A A LE + VH+ AV A
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++ VG+ALV MY K GSI DA + F+ M ER++ W +IGG A G A S F
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAG-AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M C +PN T + +L+A + A + + +K+ + + G ++ +
Sbjct: 411 QMQRNGC--LPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN----DS 417
+ G +D A + M R IS W A++ G G A ++ DS
Sbjct: 469 AKCGSIDDARLVFDGMCDRDVIS-WNAMMGGLAQNG---CGHEAFTVFLQMQQEGLVPDS 524
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG--AGCSWI-------SVKNRIHIFQA 468
++ L N +T E + V K + G+ G ++I S+ + +F
Sbjct: 525 TTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDK 584
Query: 469 KDTSHERNTEIQAML------------TKLREEMKAAGYIPDT----NFALYDVEEE--E 510
H T AM+ L +M+ G+IPD N +V+EE E
Sbjct: 585 LSVRHV--TTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALE 642
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
+ EV H A GL+ + G + T + CG+ A + +V R V
Sbjct: 643 WVKEVHSH----ATDAGLVDLRVGNALVHTYSK--CGNVKYAKQVFDDMVERNV 690
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 203/399 (50%), Gaps = 7/399 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE PN +T+ + A+++ K++H+ A+ +G D+ VG + MY+K+G
Sbjct: 311 MQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS 370
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD M ER++ +W I GR + A F+ ++R G P+L T+ + LNA
Sbjct: 371 IDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNA 430
Query: 121 CS--DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+ S L+ + +H +GF ++ + N L+ Y KC + A++VFDG+ D++ +
Sbjct: 431 SAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVI 490
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ QN +FL ++EG+ P S+L+ LE VH A
Sbjct: 491 SWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHA 550
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ + + VGSA + MY +CGSI DA + F+K+ R++ WNA+IGG A Q AL
Sbjct: 551 VETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREAL 610
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S F +M R +P+ T + +LSA A+E +K +S G+ A +V
Sbjct: 611 SLFLQM--QREGFIPDATTFINILSANVDEEALE-WVKEVHSHATDAGLVDLRVGNA-LV 666
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G V A ++ +M R ++ W ++ +G
Sbjct: 667 HTYSKCGNVKYAKQVFDDMVER-NVTTWTMMIGGLAQHG 704
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/583 (40%), Positives = 348/583 (59%), Gaps = 6/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDA 64
P+ FT+ + A + L + GKQLH+ ++ G DV VGCS DMY+K G DD+
Sbjct: 54 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 113
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+F++MPE N+ +W A I+ G K AI+ F + P+ +F + L AC +
Sbjct: 114 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S G Q++ + V+ G V N L+ Y + + A+ FD + +KN VS+ ++
Sbjct: 174 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 233
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N + E +F G+ F +S+LS A I + G +H +K
Sbjct: 234 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 293
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N + +AL+ MY +CG+I+ A FN+M +RN++ W ++I G+A G A AL F +
Sbjct: 294 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 353
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN +T V VLSACS G + +G K F SM ++GI P EHYAC+VDLLGR
Sbjct: 354 M--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 411
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+GL+ A E I MP+ VW LL ACRV+G ELGR AA+ + + +P+D ++LL
Sbjct: 412 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 471
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A+ G+W++ +RK MK+ + K AGCSWI V+NR+H F +TSH + +I L
Sbjct: 472 SNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQEL 531
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++K GYIPDT+F L+D+EEE+K + HSEKIA+AFGLI+ PIRI KNL
Sbjct: 532 DQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNL 591
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+A K+IS GRE++VRD+NRFH +G CSC+DYW
Sbjct: 592 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FD+MPERNL TW I+ G ++AID F+++ +G PD T+ + L+AC++
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSW 180
LL LG+QLH ++R G +V V LVD Y KC V ++ VF+ + + N +SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 181 CSMLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+++ Y Q+ E ++ ++F + P F SSVL AC ++ G V++ AV
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + VG++L+ MY + G ++DA AF+ + E+NLV +NAI+ GYA ++ A
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 300 SFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F E+ T + A T +LS + GA+ KG +I + LK G K +
Sbjct: 249 LFNEIADTGIGISA----FTFASLLSGAASIGAMGKGEQI-HGRLLKGGYKSNQCICNAL 303
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + R G ++ A+++ EM R IS W +++ +G
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG 342
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 5/345 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN F+F + KA L P TG+Q+++ A+K G VG S MY+++G +DA
Sbjct: 157 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++NA + + + A F + TG TF + L+ +
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+HG L++ G+ N +CN L+ Y +C + A VF+ + D+N +SW SM+
Sbjct: 277 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ +MF G +P + +VLSAC+ + + G + +++ + +
Sbjct: 337 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 396
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ G + +A N MP + + W ++G G+ ++ + E
Sbjct: 397 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 456
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ + Y+ L + ++ AG + +KI SM + IK
Sbjct: 457 ILEQEPDDPAAYILLSNLHAS---AGQWKDVVKIRKSMKERNLIK 498
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/586 (39%), Positives = 344/586 (58%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ T + A + L G+ +H A ++G + V V + D Y K G
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS 293
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F M RN+ +WN I G + A F+ + G EP ++ L+A
Sbjct: 294 VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHA 353
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ GR +H L +VSV N L+ Y KC V +A VF + K V+W
Sbjct: 354 CANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTW 413
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN +F + ++P F + SV++A A ++ + +H +A++
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIR 473
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N+FV +AL+D + KCG+IQ A F+ M ER+++ WNA+I GY GH AL
Sbjct: 474 TLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDL 533
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + + PN +T + V++ACS +G VE+GM F SM YG++P +HY +VDL
Sbjct: 534 FNEMQNGSVK--PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A++ I++MP++P I+V GA+L ACR++ ELG AD LF LDP+D G H
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYH 651
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+NM+A+ W++ VR M+ GI+K GCS + ++N +H F + T+H ++ I
Sbjct: 652 VLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIY 711
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L +EMKAAGY+PDTN +++DVEE+ K + HSE++A+AFGL+ G I I
Sbjct: 712 AYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIR 770
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K+IS + GRE+IVRD RFH F +G CSC DYW
Sbjct: 771 KNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 228/450 (50%), Gaps = 13/450 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L + S G+++H + + +G ++F + ++Y+K
Sbjct: 133 MRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQ 192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA KMF+ MP+R+L +WN ++ G + A+ + ++ G +PD IT + L A
Sbjct: 193 IEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPA 252
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L++GR +HG+ R+GF+ V+V ++D Y KC V A++VF G+ +N VSW
Sbjct: 253 VADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSW 312
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y QN E E FL EGVEP + + L ACA + LE GR VH + +
Sbjct: 313 NTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ V ++L+ MY KC + A F + + +V WNA+I GYA G + AL+
Sbjct: 373 KKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNL 432
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM S + P+ TLV V++A + +V + K + + ++ + ++D
Sbjct: 433 FCEMQSHDIK--PDSFTLVSVITALADL-SVTRQAKWIHGLAIRTLMDKNVFVCTALIDT 489
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS--G 418
+ G + A ++ M R I+ W A+++ YG GR A D LF N S
Sbjct: 490 HAKCGAIQTARKLFDLMQERHVIT-WNAMIDG---YGTNGHGREALD-LFNEMQNGSVKP 544
Query: 419 NHVLLSNMFAA---TGRWEEADLVRKEMKD 445
N + ++ AA +G EE + MK+
Sbjct: 545 NEITFLSVIAACSHSGLVEEGMYYFESMKE 574
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 178/371 (47%), Gaps = 7/371 (1%)
Query: 23 LHIPVTGKQLHA---LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATW 79
L + + K+LH L +K+G ++ ++ K +A ++F+ + + +
Sbjct: 51 LELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
+ + ++A+ + +R P + F L + L+ GR++HG ++
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
+GF N+ +V+ Y KC ++ A +F+ + ++ VSW +++ Y QN Q+
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
L + G +P + SVL A A + L +GRS+H A +A E + V +A++D Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CGS++ A + F M RN+V WN +I GYA G ++ A ++F +M E P V+++
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVE--PTNVSMM 348
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
L AC+ G +E+G + + + + I ++ + + VD A + +
Sbjct: 349 GALHACANLGDLERG-RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH 407
Query: 380 RPTISVWGALL 390
+ T+ W A++
Sbjct: 408 K-TVVTWNAMI 417
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 12/281 (4%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
C+ L+ Q+ ++++GF L+ + K N + A VF+ + K DV + +M
Sbjct: 54 CTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTM 113
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y +N + + + R + V P + + +L L GR +H + +
Sbjct: 114 LKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGF 173
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N+F +A+V++Y KC I+DA F +MP+R+LV WN ++ GYA G A A+ +
Sbjct: 174 QSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VD 359
M P+ +TLV VL A + A+ G I Y + G E+ V +D
Sbjct: 234 M--QEAGQKPDSITLVSVLPAVADLKALRIGRSIH-----GYAFRAGFEYMVNVATAMLD 286
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G V A + K M R +S W +++ G+ E
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVS-WNTMIDGYAQNGESE 326
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/562 (42%), Positives = 340/562 (60%), Gaps = 8/562 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G QLHA +K G + + YSKT L + ++F + P ++ TW++ IS+
Sbjct: 39 GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P +++ F + R G PD F + +C S L + + LH F +++ + ++ V
Sbjct: 99 NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF----LTAR 204
+ ++D Y KC ++ A VFD + +N VSW ++ YVQ E++ ++F +
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EGV DF +SSVL C L++GR +H ++ K + + FV S+L+ +Y KCG ++
Sbjct: 219 NEGV--NDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVE 276
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A F ++ RNL WNA++ A H D F++M S+ N++T +CVL A
Sbjct: 277 EAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKA-NFITFLCVLYA 335
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS AG VEKG K ++ + YGI+PG +HY+ +VDLLGRAG ++ A ++I+EMPM PT S
Sbjct: 336 CSHAGLVEKG-KYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTES 394
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VWGALL CR++G +L AD + +L SG HV+LSN +AA GRWEEA RK M+
Sbjct: 395 VWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMR 454
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D GIKK G SW+ NRIH F A D SH ++ EI L +L EEM AGY+ DT+F L
Sbjct: 455 DRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLK 514
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
+V+ EEK + +HSE++A+AFG I P G PIR+ KNLR+CGDCH+A KFIS GR +
Sbjct: 515 EVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVI 574
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
IVRDNNRFHRF DG C+C DYW
Sbjct: 575 IVRDNNRFHRFEDGKCTCGDYW 596
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 4/347 (1%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+P C L + + L G QLH +++ G + + L++FY K + +
Sbjct: 17 QPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQ 76
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+F K+ +W S++ + QN F R+GV P D + S +C ++
Sbjct: 77 IFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSS 136
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L + + +H A+K +IFVGS+++DMY KCG I A F++MP RN+V W+ +I G
Sbjct: 137 LPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYG 196
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G D +L F+ N TL VL C + ++ G ++ + ++ K
Sbjct: 197 YVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMG-RLIHGLSFKTSF 255
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
+ ++ L + G+V+ AY++ +E+ +R + +W A+L AC + + D
Sbjct: 256 DSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQHAHTDKTFELFD 314
Query: 408 NLFKLDPNDSGNHVLLSNMFAAT--GRWEEADLVRKEMKDVGIKKGA 452
+ + + L ++A + G E+ + MKD GI+ G
Sbjct: 315 KMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGT 361
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + P+D FP K+ L K LH ALK+ D+FVG S DMY+K G
Sbjct: 112 MLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGD 171
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL---RRTGGEPDLITFCAF 117
A +FDEMP RN+ +W+ I V G ++ F G D T +
Sbjct: 172 ICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDF-TLSSV 230
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C +LLQ+GR +HG ++ FD + V + L+ Y KC V A VF+ + +N
Sbjct: 231 LRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNL 290
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM-ISSVLSACARIAGLELGRSVHA 236
W +ML+ Q+ + ++F + G +F+ VL AC+ +E G+
Sbjct: 291 GMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFE 350
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ +E S +VD+ G+ G + DA +MP E W A++ G G+
Sbjct: 351 LMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTK 410
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+A + ++ + + +V L +A R K K+ +K
Sbjct: 411 LASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIK 459
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/583 (40%), Positives = 348/583 (59%), Gaps = 6/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDA 64
P+ FT+ + A + L + GKQLH+ ++ G DV VGCS DMY+K G DD+
Sbjct: 49 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 108
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+F++MPE N+ +W A I+ G K AI+ F + P+ +F + L AC +
Sbjct: 109 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 168
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S G Q++ + V+ G V N L+ Y + + A+ FD + +KN VS+ ++
Sbjct: 169 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 228
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N + E +F G+ F +S+LS A I + G +H +K
Sbjct: 229 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 288
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N + +AL+ MY +CG+I+ A FN+M +RN++ W ++I G+A G A AL F +
Sbjct: 289 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 348
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN +T V VLSACS G + +G K F SM ++GI P EHYAC+VDLLGR
Sbjct: 349 M--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 406
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+GL+ A E I MP+ VW LL ACRV+G ELGR AA+ + + +P+D ++LL
Sbjct: 407 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILL 466
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A+ G+W++ +RK MK+ + K AGCSWI V+NR+H F +TSH + +I L
Sbjct: 467 SNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQEL 526
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++K GYIPDT+F L+D+EEE+K + HSEKIA+AFGLI+ PIRI KNL
Sbjct: 527 DQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNL 586
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+A K+IS GRE++VRD+NRFH +G CSC+DYW
Sbjct: 587 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FD+MPERNL TW I+ G ++AID F+++ +G PD T+ + L+AC++
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSW 180
LL LG+QLH ++R G +V V LVD Y KC V ++ VF+ + + N +SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 181 CSMLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+++ Y Q+ E ++ ++F + P F SSVL AC ++ G V++ AV
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + VG++L+ MY + G ++DA AF+ + E+NLV +NAI+ GYA ++ A
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 300 SFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F E+ T + A T +LS + GA+ KG +I + LK G K +
Sbjct: 244 LFNEIADTGIGISA----FTFASLLSGAASIGAMGKGEQI-HGRLLKGGYKSNQCICNAL 298
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + R G ++ A+++ EM R IS W +++ +G
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG 337
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 167/345 (48%), Gaps = 5/345 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN F+F + KA L P TG+Q+++ A+K G VG S MY+++G +DA
Sbjct: 152 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 211
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++NA + + + A F + TG TF + L+ +
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+HG L++ G+ N +CN L+ Y +C + A VF+ + D+N +SW SM+
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ +MF G +P + +VLSAC+ + + G + +++ + +
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 391
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ G + +A N MP + + W ++G G+ ++ + E
Sbjct: 392 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 451
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ + Y+ L + ++ AG + +KI SM + IK
Sbjct: 452 ILEQEPDDPAAYILLSNLHAS---AGQWKDVVKIRKSMKERNLIK 493
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/630 (39%), Positives = 362/630 (57%), Gaps = 46/630 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ F FP +FKA S L GK ++ L G + V S DM+ K G
Sbjct: 102 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + F+E+ +++ WN +S G K A++ F + G +P+ IT + ++A
Sbjct: 162 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSA 221
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C++ SLL+ GR++HG+ ++ D ++ V N LVD+Y KC V +A+ F I + VS
Sbjct: 222 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 281
Query: 180 WCSMLVV--YVQNYEEENGCQMF------------LTAR--------------------- 204
W +ML V + Q + + + F L+ R
Sbjct: 282 WNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNA 341
Query: 205 ----RE----GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
RE VE + S L AC+++A L G+ +H ++ ++ F+ ++L+DM
Sbjct: 342 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 401
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
YG+CGSIQ + F+ MP+R+LV WN +I Y G A++ F++ +M + PN++
Sbjct: 402 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK--PNHI 459
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T +LSACS +G +E+G K F M +Y + P E YAC+VDLL RAG + E I++
Sbjct: 460 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEK 519
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
MP P +VWG+LL ACR++ P+L AA LF+L+P SGN+VL++N+++A GRWE+A
Sbjct: 520 MPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDA 579
Query: 437 DLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYI 496
+R MK+ G+ K GCSWI VK ++H F DTSH +I A + L ++K GY+
Sbjct: 580 AKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYV 639
Query: 497 PDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
PDTNF L DV+E+EK + HSEKIALAFGLI+ G P+RI KNLR+CGDCHSA KFI
Sbjct: 640 PDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFI 699
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S + R++I+RDN RFH F DG CSC DYW
Sbjct: 700 SKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 222/494 (44%), Gaps = 69/494 (13%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
ECI + + + L+ G Q+HA + +G F+G ++Y +TG +D
Sbjct: 8 ECIE----IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 63
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +MFD+M ERN+ +W A + G + I F + G PD F ACS+
Sbjct: 64 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 123
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
++G+ ++ +++ GF+GN V ++D + KC + +A+ F+ I K+ W M
Sbjct: 124 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 183
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-C 242
+ Y E + +F EGV+P I+S +SAC ++ L GR +H +K
Sbjct: 184 VSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 243
Query: 243 VEGNIFVGSALVDMYGKCGSI--------------------------------------- 263
++ ++ VG++LVD Y KC S+
Sbjct: 244 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEF 303
Query: 264 -QDAEIA---FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
Q IA F+++ R++V WN+II A G + AL EM E N VT+V
Sbjct: 304 FQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV--NTVTMV 361
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
L ACS+ A+ +G +I + ++ G+ ++D+ GR G + ++ I MP
Sbjct: 362 SALPACSKLAALRQGKEI-HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 420
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSNMFAA---T 430
R +S W +++ VYG G + A NLF+ L P NH+ +N+ +A +
Sbjct: 421 RDLVS-WNVMIS---VYGMHGFG-MDAVNLFQQFRTMGLKP----NHITFTNLLSACSHS 471
Query: 431 GRWEEADLVRKEMK 444
G EE K MK
Sbjct: 472 GLIEEGWKYFKMMK 485
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/587 (40%), Positives = 341/587 (58%), Gaps = 31/587 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FTF +FKA L GK +H ALKS D++VG + D+Y+K+G
Sbjct: 231 MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGD 290
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA F+E+P++++ W+ I+ + K A++ F +R+ P+ TF + L A
Sbjct: 291 IDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQA 350
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS- 179
C+ L LG Q+H +++ G +V V N L+D Y KC + + +F +NDV+
Sbjct: 351 CATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTP 410
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++V +VQ + E ++FL V+ + SS L ACA +A LE G +H++ V
Sbjct: 411 WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 470
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + +I V +AL+DMY KCGSI+DA + F+ M +++ V WNA+I GY+ G
Sbjct: 471 KTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG------- 523
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
AC+ AG +++G F SM +GI+P EHY C+V
Sbjct: 524 -----------------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVW 560
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR G +D+A ++I E+P +P++ VW ALL AC ++ ELGRI+A ++ +++P D
Sbjct: 561 LLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKAT 620
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLLSNM+A RW+ VRK MK G+KK G SWI + +H F DTSH I
Sbjct: 621 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 680
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
ML L + K AGYIP+ N L DVE+EEK + HSE++AL+FG+I P G PIRI
Sbjct: 681 NGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRI 740
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+A K IS +V RE++VRD NRFH F +G CSC DYW
Sbjct: 741 MKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 183/365 (50%), Gaps = 3/365 (0%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P GK LH LK G D+F +MY K+ DA K+FDEMPERN ++ I
Sbjct: 54 PSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQG 113
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
R AI+ F+ L R G E + F L +LG +H + + G + N
Sbjct: 114 YAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESN 173
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V L+D Y C V +A+ VFDGI+ K+ VSW M+ + +N + ++F R
Sbjct: 174 AFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRM 233
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P +F +SV AC + ++G+SVH A+K+ E +++VG AL+D+Y K G I D
Sbjct: 234 VGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDD 293
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A AF ++P+++++ W+ +I YA + A+ F +M + +PN T VL AC
Sbjct: 294 ARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR--QALVLPNQFTFASVLQAC 351
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ + G +I + +K G+ ++D+ + G ++ + + E P R ++
Sbjct: 352 ATMEGLNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTP 410
Query: 386 WGALL 390
W ++
Sbjct: 411 WNTVI 415
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 195/398 (48%), Gaps = 5/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE N F F + K ++ G +HA K G + FVG + D YS G
Sbjct: 130 LHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGR 189
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD + +++ +W ++ K A+ F +R G +P+ TF + A
Sbjct: 190 VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKA 249
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +G+ +HG ++S ++ ++ V L+D Y K ++ A+ F+ I K+ + W
Sbjct: 250 CLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPW 309
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y Q+ + + +MF R+ V P F +SVL ACA + GL LG +H +K
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK 369
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC-WNAIIGGYAHQGHADMALS 299
+ ++FV +AL+D+Y KCG ++++ F + P RN V WN +I G+ G + AL
Sbjct: 370 IGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALR 429
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M R +A VT L AC+ A+E G++I +S+T+K ++D
Sbjct: 430 LFLNMLEYRVQATE--VTYSSALRACASLAALEPGLQI-HSLTVKTTFDKDIVVTNALID 486
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G + A + M + +S W A+++ ++G
Sbjct: 487 MYAKCGSIKDARLVFDLMNKQDEVS-WNAMISGYSMHG 523
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 208 VEPKDF---MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V P +F ++ L C + G+ +H +K ++F + L++MY K +
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F++MPERN + + +I GYA A+ F + E P T + L
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
G + G+ ++ K G + A ++D G VD A E+ + + +S
Sbjct: 151 SMDCGELGWGI---HACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS 207
Query: 385 VWGALLN 391
W ++
Sbjct: 208 -WTGMVT 213
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/586 (40%), Positives = 346/586 (59%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + PN FT L A++ L G+ +HA K G +D V + MY K G
Sbjct: 422 MRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGS 481
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++F+ R+L +WNA +S + F + G P++ TF + L +
Sbjct: 482 VQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRS 541
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS S + LG+Q+H +V++ DGN V LVD Y K + A+ +F+ +I ++ +W
Sbjct: 542 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 601
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q+ + E + F+ +REGV+P +F ++S LS C+RIA L+ GR +H++A+K
Sbjct: 602 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK 661
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A G++FV SALVDMY KCG ++DAE+ F+ + R+ V WN II GY+ G AL +
Sbjct: 662 AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKA 721
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + VP+ VT + VLSACS G +E+G K F S++ YGI P EHYAC+VD+
Sbjct: 722 FEAM--LDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDI 779
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG I+EM + + +W +L AC+++G E G AA LF+L+P N+
Sbjct: 780 LGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNY 839
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSNMFAA G W++ VR M G+KK GCSW+ V ++H+F + D SH + EI
Sbjct: 840 ILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIH 899
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L +++ + GY P+T+ L++V + EK + +HSE++ALAF L++ IRI
Sbjct: 900 LKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIF 959
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH K IS I +E++VRD N FH F +G CSC ++W
Sbjct: 960 KNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 207/393 (52%), Gaps = 4/393 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I+ + FT + K + G+ +H+LA++ G D F+ C DMYSK GL DA
Sbjct: 326 INFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDAL 385
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F + + ++ +W+A I+ G+ + A + F +R +G P+ T + ++A +D
Sbjct: 386 KVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G +H + + GF+ + +VCN LV Y K V VF+ +++ +SW ++L
Sbjct: 446 DLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLS 505
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ N + G ++F EG P + S+L +C+ ++ ++LG+ VHA VK ++G
Sbjct: 506 GFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 565
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N FVG+ALVDMY K ++DAE FN++ +R+L W I+ GYA G + A+ F +M
Sbjct: 566 NDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQM- 624
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R PN TL LS CSR ++ G ++ +SM +K G + +VD+ + G
Sbjct: 625 -QREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCG 682
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
V+ A + + R T+S W ++ +G+
Sbjct: 683 CVEDAEVVFDGLVSRDTVS-WNTIICGYSQHGQ 714
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 11/384 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + N+FT+ KA S GKQ+HA A+K G D+FVG + D+Y+K G
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGE 279
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL--ITFCAFL 118
A+++F MP++N +WNA ++ G + ++ F R TG E + T L
Sbjct: 280 MVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFC--RMTGSEINFSKFTLSTVL 337
Query: 119 NACSDCSLLQLGRQLHGFLVRSG--FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
C++ L+ G+ +H +R G D +S C LVD Y KC G A VF I D +
Sbjct: 338 KGCANSGNLRAGQIVHSLAIRIGCELDEFISCC--LVDMYSKCGLAGDALKVFVRIEDPD 395
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ Q + ++F R GV P F ++S++SA + L G S+HA
Sbjct: 396 VVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHA 455
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
K E + V +ALV MY K GS+QD F R+L+ WNA++ G+ D
Sbjct: 456 CVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDT 515
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F +M + PN T + +L +CS V+ G ++ ++ +K +
Sbjct: 516 GLRIFNQMLAEGFN--PNMYTFISILRSCSSLSDVDLGKQV-HAQIVKNSLDGNDFVGTA 572
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMR 380
+VD+ + ++ A I + R
Sbjct: 573 LVDMYAKNRFLEDAETIFNRLIKR 596
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 183/364 (50%), Gaps = 4/364 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H +KSG D + S ++Y+K G + A K+F E+PER++ +W A I+ V
Sbjct: 147 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA 206
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A++ F +RR G E + T+ L ACS C L+ G+Q+H ++ G ++ V
Sbjct: 207 EGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFV 266
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC E+ LA+ VF + +N VSW ++L + Q + E +F +
Sbjct: 267 GSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEI 326
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
F +S+VL CA L G+ VH++A++ E + F+ LVDMY KCG DA
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ + ++V W+AII +G + A F+ M +PN TL ++SA +
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR--HSGVIPNQFTLASLVSAATDL 444
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + G I ++ KYG + +V + + G V + + R IS W A
Sbjct: 445 GDLYYGESI-HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLIS-WNA 502
Query: 389 LLNA 392
LL+
Sbjct: 503 LLSG 506
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 4/281 (1%)
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
L + L C+ L G+ +HG +++SG + + + N LV+ Y KC A VF
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
I +++ VSW +++ +V +F RREGVE +F ++ L AC+ LE
Sbjct: 188 EIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEF 247
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+ VHA A+K ++FVGSALVD+Y KCG + AE F MP++N V WNA++ G+A
Sbjct: 248 GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ 307
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G A+ L+ F MT E + TL VL C+ +G + G +I +S+ ++ G +
Sbjct: 308 MGDAEKVLNLFCRMTG--SEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGCELD 364
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
C+VD+ + GL A ++ + P + W A++
Sbjct: 365 EFISCCLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSAIIT 404
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/586 (42%), Positives = 342/586 (58%), Gaps = 30/586 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + PN +TF + A + V G+Q+H+L K G + +VFV + DMY+K
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+K+F+EMP L A D ++F + +A
Sbjct: 61 MLMAEKVFEEMPTLLLENLTAL---------------------------DEVSFSSVFSA 93
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G+Q+HG ++ G V + N L D YGKC +F ++ V+W
Sbjct: 94 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M++ YV N+ E+ C F RR+G P + SSVL +CA +A L G +H ++
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ V S+L+ MY KCGS+ DA F + +RN+VCW AII GHA+ +
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M +R P+Y+T V VLSACS G VE+G F SM +GI PG EHYAC+VDL
Sbjct: 274 FEQM--LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDL 331
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAG +DRA I+ MP++P SVWGALL+ACR + +G+ A LF L+P++ GN+
Sbjct: 332 LSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNY 391
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL N+ G EAD VR++M+ +G++K GCSWI +KN ++F D SHE+ EI
Sbjct: 392 VLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIY 451
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML KL+E +K GY+ +T FA+ + EE K + +HSEKIALAFGL+++P G PIRI
Sbjct: 452 EMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIK 510
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR CGDCH+ KF S I RE+IVRD NRFH F +G CSC DYW
Sbjct: 511 KNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 350/559 (62%), Gaps = 6/559 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H A+K G ++FV + D+Y K G+ +A +F M R+L TWN+ IS GG+
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGK 249
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCN 150
A++ F + +G PD++T + +A + C + +H ++ R G+D G++ N
Sbjct: 250 VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGN 309
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR-REGVE 209
+VD Y K +++ A+ VFD + D++ VSW +++ Y+QN +++ EG++
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLK 369
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P SVL A + + GL+ G +HA+++K + +++V + L+D+Y KCG + +A
Sbjct: 370 PIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFL 429
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F MP R+ WNAII G GH ALS F +M + E P++VT V +L+ACS AG
Sbjct: 430 FEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ--QEEIKPDHVTFVSLLAACSHAG 487
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V++G F M YGI P A+HY C+VD+LGRAG +D A+E I+ MP++P +VWGAL
Sbjct: 488 LVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGAL 547
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++G E+G++A+ NLF+LDP + G +VL+SNM+A G+W+ D VR ++ ++
Sbjct: 548 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQ 607
Query: 450 KGAGCSWISVKNRIHIFQA--KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
K G S + VK + +F + + H ++ EIQ L L +MK+AGY+PD +F L DVE
Sbjct: 608 KTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVE 667
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E+EK + +HSE++A+AFG+I PPG P+ I KNLR+CGDCHSA K+IS I RE+IVR
Sbjct: 668 EDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVR 727
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F DG+CSC D+W
Sbjct: 728 DANRFHHFKDGHCSCGDFW 746
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 201/395 (50%), Gaps = 10/395 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ FTFP L +A+ P + QLHA AL+ G +H +VF S Y + G +A
Sbjct: 65 LRPDSFTFPPLVRAAPG---PASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
++FDEMPER++ WNA +S R +A+ + G D +T + L C
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L +H + V+ G G + VCN L+D YGK + A VF G+ ++ V+W S++
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHA-VAVKAC 242
Q + ++F GV P + S+ SA A+ G ELG +SVH V +
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQ-CGDELGAKSVHCYVRRRGW 300
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
G+I G+A+VDMY K I A+ F+ +P+R++V WN +I GY G A+ A+ +
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M + P T V VL A S G +++GM++ +++++K G+ C++DL
Sbjct: 361 DMHNHEGLK-PIQGTFVSVLPAYSYLGGLQQGMRM-HALSIKTGLNLDVYVTTCLIDLYA 418
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A + + MP R T W A++ V+G
Sbjct: 419 KCGKLVEAMFLFEHMPRRST-GPWNAIIAGLGVHG 452
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
E + P TF + A S L G ++HAL++K+G DV+V D+Y+K G
Sbjct: 365 HEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLV 424
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+A +F+ MP R+ WNA I+ + G A+ F +++ +PD +TF + L ACS
Sbjct: 425 EAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACS 484
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNG---LVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
L+ GR F + G V + +VD G+ ++ A + K D +
Sbjct: 485 HAGLVDQGRSF--FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSA 542
Query: 180 -WCSML 184
W ++L
Sbjct: 543 VWGALL 548
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/590 (41%), Positives = 359/590 (60%), Gaps = 7/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R + P++F+ + S+L G+Q+H K G DV V + +Y++T
Sbjct: 548 MKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDS 607
Query: 61 KDDADKMFDEMPERNLATWNAYI-SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
++ K+F +MPE + +WN++I + A A+ F+ + + G P+ +TF L
Sbjct: 608 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILA 667
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A S S+L LG Q+H +++ + ++ N L+ FYGKC ++ +++F + ++ D V
Sbjct: 668 AVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEV 727
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+ Y+ + + + G + F ++VLSACA +A LE G VHA A
Sbjct: 728 SWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACA 787
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+AC+E ++ VGSALVDMY KCG I A F MP RN+ WN++I GYA GH AL
Sbjct: 788 VRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKAL 847
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M + P++VT V VLSACS G V++G K F SM YG+ P EH++C+V
Sbjct: 848 KIFTRMK--QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMV 905
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKLDPND 416
DLLGRAG V + + IK MPM P I +W +L AC R G+ ELG+ AA L +L+P +
Sbjct: 906 DLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQN 965
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLLSNM AA G WE+ R M+ +KK AGCSW+++K+ +H+F A D +H
Sbjct: 966 AVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEK 1025
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+I L +L +++ AGY+P+T +ALYD+E E K + +HSEK+A+AF ++ +P
Sbjct: 1026 EKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELP 1084
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+CGDCH+AFK+IS IVGR++I+RD+NRFH F G CSC DYW
Sbjct: 1085 IRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 189/393 (48%), Gaps = 10/393 (2%)
Query: 6 ISPNDFTFPCLFKASSALHI--PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+ PN++T L A+ +L V +Q+ KSG + D++VG + + +++ GL D
Sbjct: 345 LRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR---RTGGEPDLITFCAFLNA 120
A +F +M +RN T N + + + A F ++ E ++ F
Sbjct: 405 AKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEF 464
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ + G+++H +L RSG D +S+ N LV+ YGKC + A VF + K+ VS
Sbjct: 465 SNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS 524
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ N E F T +R G+ P +F + S LS+C+ + L LGR +H
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA-HQGHADMAL 298
K ++ ++ V +AL+ +Y + SI + + F +MPE + V WN+ IG A ++ AL
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQAL 644
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F EM M+ PN VT + +L+A S + G +I +++ LKY + ++
Sbjct: 645 KYFLEM--MQAGWRPNRVTFINILAAVSSFSVLGLGHQI-HALILKYSVADDNAIENALL 701
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G+ ++ I M R W ++++
Sbjct: 702 AFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 193/392 (49%), Gaps = 28/392 (7%)
Query: 17 FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
+K SS+L+ LH K+G DVF + ++Y + G A K+FDEMP++NL
Sbjct: 150 YKTSSSLY---DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNL 206
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC--SLLQLGRQLH 134
+W+ IS P A F + +G P+ + L AC C + ++LG Q+H
Sbjct: 207 VSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH 266
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCN-EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
F+ + ++ + N L+ Y C+ + A VFD I +N V+W S++ VY + +
Sbjct: 267 AFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDA 326
Query: 194 ENGCQMFLTARREGVE----PKDFMISSVLSACARIA--GLELGRSVHAVAVKACVEGNI 247
+ ++F + EGVE P ++ + S+++A +A GL L + K+ ++
Sbjct: 327 VSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL 386
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+VGSALV+ + + G + A++ F +M +RN V N ++ G A Q + A F+EM +
Sbjct: 387 YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL 446
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMK--------IFYSMTLKYGIKPGAEHYACVVD 359
N +LV +LS + +++G + +F S + I G +V+
Sbjct: 447 ---VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIG----NALVN 499
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G+ +D A + + MP + T+S W ++++
Sbjct: 500 MYGKCTAIDNACSVFQLMPSKDTVS-WNSMIS 530
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 13/341 (3%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
LH L ++GF +V CN L++ Y + + A+ +FD + KN VSW ++ Y QN
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARI--AGLELGRSVHAVAVKACVEGNIFV 249
+ C +F G+ P F + S L AC + G++LG +HA K ++ +
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280
Query: 250 GSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+ L+ MY C GSI DA F+++ RN V WN+II Y +G A+S+F+ + M+
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGD---AVSAFKLFSVMQ 337
Query: 309 CEAV-----PNYVTLVC-VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
E V PN TL V +ACS A ++ + K G + +V+
Sbjct: 338 MEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFA 397
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R GL+D A I K+M R +++ G ++ R + E ++ + ++ N VL
Sbjct: 398 RYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVL 457
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
LS F +E +E+ + G + IS+ N +
Sbjct: 458 LST-FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNAL 497
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 344/572 (60%), Gaps = 4/572 (0%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L ++S+ + G HA ++ G D +MYSK GL + A K+FDEMP R+
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCSLLQLGRQLH 134
L +WN + + G + A+ F+ +++ G T + + AC+ C + + +QLH
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC-KQLH 171
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
GF +++ D NV V L+D Y KC V A +VF+ + +++DV+W SM+ YVQN E
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 231
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F A+ G+E F ISS LSACA A L G+ V AV+ K + NIFV S+L+
Sbjct: 232 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLI 291
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG I++A F+ + E+N+V WNAI+ G++ + A+ FE+M M PN
Sbjct: 292 DMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQM--GICPN 349
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
+T + VLSACS G VEKG K F M + + P HY+C+VD+LGRAGL+ A + I
Sbjct: 350 DITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFI 409
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
MP T S+WG+LL +CR+Y EL +AA +LF+++P+++GNHVLLSN++AA RWE
Sbjct: 410 DRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWE 469
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
E R +K+ KK G SWI +K+++H F + +H R EI L L EMK G
Sbjct: 470 EVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIG 529
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y T L+DVEE K + HHSEK+AL FG++ +P G PIRI KNLRICGDCHS K
Sbjct: 530 YKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMK 589
Query: 555 FISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S I RE+IVRD NRFH F +GYCSC ++W
Sbjct: 590 LASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E S ++FT + A +A KQLH ALK+ +VFVG + D+Y+K GL
Sbjct: 139 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL 198
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F+ MPER+ TW++ ++ V + A+ F + G E + T + L+A
Sbjct: 199 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 258
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+Q+ ++G N+ V + L+D Y KC + A VF + +KN V W
Sbjct: 259 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLW 318
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++L + ++ F ++ G+ P D SVLSAC+ + +E GR + ++
Sbjct: 319 NAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR 378
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
V N+ S +VD+ G+ G + +A+ ++MP + W +++ + ++A
Sbjct: 379 VHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAE 438
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ + + + N+V L + +A R V + +
Sbjct: 439 VAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLL 478
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ +L + AR G + HA ++ + + + L++MY KCG ++ A F++MP
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R+LV WN ++G + G + AL F +M + T+ V+ AC+ V +
Sbjct: 110 VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSC--SEFTVSSVVCACAAKCCVFE- 166
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
K + LK + ++D+ + GLV A + + MP R ++ W +++
Sbjct: 167 CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMV 221
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 344/572 (60%), Gaps = 4/572 (0%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L ++S+ + G HA ++ G D +MYSK GL + A K+FDEMP R+
Sbjct: 26 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCSLLQLGRQLH 134
L +WN + + G + A+ F+ +++ G T + + AC+ C + + +QLH
Sbjct: 86 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC-KQLH 144
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
GF +++ D NV V L+D Y KC V A +VF+ + +++DV+W SM+ YVQN E
Sbjct: 145 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 204
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F A+ G+E F ISS LSACA A L G+ V AV+ K + NIFV S+L+
Sbjct: 205 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLI 264
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG I++A F+ + E+N+V WNAI+ G++ + A+ FE+M M PN
Sbjct: 265 DMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQM--GICPN 322
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
+T + VLSACS G VEKG K F M + + P HY+C+VD+LGRAGL+ A + I
Sbjct: 323 DITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFI 382
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
MP T S+WG+LL +CR+Y EL +AA +LF+++P+++GNHVLLSN++AA RWE
Sbjct: 383 DRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWE 442
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
E R +K+ KK G SWI +K+++H F + +H R EI L L EMK G
Sbjct: 443 EVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIG 502
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y T L+DVEE K + HHSEK+AL FG++ +P G PIRI KNLRICGDCHS K
Sbjct: 503 YKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMK 562
Query: 555 FISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S I RE+IVRD NRFH F +GYCSC ++W
Sbjct: 563 LASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E S ++FT + A +A KQLH ALK+ +VFVG + D+Y+K GL
Sbjct: 112 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL 171
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F+ MPER+ TW++ ++ V + A+ F + G E + T + L+A
Sbjct: 172 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 231
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+Q+ ++G N+ V + L+D Y KC + A VF + +KN V W
Sbjct: 232 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLW 291
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++L + ++ F ++ G+ P D SVLSAC+ + +E GR + ++
Sbjct: 292 NAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR 351
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
V N+ S +VD+ G+ G + +A+ ++MP + W +++ + ++A
Sbjct: 352 VHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAE 411
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ + + + N+V L + +A R V + +
Sbjct: 412 VAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLL 451
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ +L + AR G + HA ++ + + + L++MY KCG ++ A F++MP
Sbjct: 23 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 82
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R+LV WN ++G + G + AL F +M + T+ V+ AC+ V +
Sbjct: 83 VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSC--SEFTVSSVVCACAAKCCVFE- 139
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
K + LK + ++D+ + GLV A + + MP R ++ W +++
Sbjct: 140 CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMV 194
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 355/593 (59%), Gaps = 12/593 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSAL---HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+ R+ + P+ FT + +A S G Q+H A+K G I+D FV + D+YSK
Sbjct: 986 LLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSK 1045
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G D+A+ + + +LA+WNA + + + + A++ F + G D IT
Sbjct: 1046 GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ A L+ G+Q+ + ++ GF+ ++ V +G++D Y KC ++ A +F I ++
Sbjct: 1106 IKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y++N +E++ ++ R GV+P ++ ++++ A + + LE G+ +HA
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + FVG++LVDMY KCGS+QDA F KM R +V WNA++ G A GH D A
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEA 1285
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F M S + P+ VT + VLSACS +G + K F +M YGI P EHY+C+
Sbjct: 1286 LNLFRTMQSNGIQ--PDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCL 1343
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VD LGRAG + A +I MP + + S++ ALL ACR G E + AD L LDP+DS
Sbjct: 1344 VDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDS 1403
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VLLSN++AA+ +W++ R MK +KK G SWI VKN++H+F D SH + +
Sbjct: 1404 SAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQAS 1463
Query: 478 ----EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+I+ ++ ++REE Y+PDT+F L DVEEEEK + +HSEK+A+AFGLI+ PP
Sbjct: 1464 LIYEKIEDLMKRIREE---GSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPP 1520
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+CGDCHSA K IS + RE+++RD NRFH F +G CSC DYW
Sbjct: 1521 SATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 19/418 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ R I + T + A+ G+Q+HAL +KS V V S +MYSK G+
Sbjct: 885 LLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGV 944
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+K F PE +L +WN IS+ AI F +L R G +PD T + L A
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 121 CS---DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
CS + LG Q+H + ++ G + V L+D Y K ++ A+ + G D +
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
SW +++ Y+++ + + F G+ + +++ + A + L+ G+ + A
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+K +++V S ++DMY KCG + +A F ++ + V W +I GY G D A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT-LKYGIKPGAEHY- 354
LS + MR V P+ T ++ A S A+E+G +I ++ L Y + +H+
Sbjct: 1185 LSVYH---LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFV 1237
Query: 355 -ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+VD+ + G V AY + ++M +R + W A+L +G + A NLF+
Sbjct: 1238 GTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQHGHVD----EALNLFR 1290
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 13/338 (3%)
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+K A KMF N+ WN ++ + G+ AID F L R+ D +T L+
Sbjct: 843 VKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L LG Q+H +++S F V V N L++ Y K V A+ F + + +S
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLIS 962
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-----LGRSV 234
W +M+ Y QN E F R+G++P F ++SVL AC+ G E LG V
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS--TGDEGEYFTLGSQV 1020
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H A+K + + FV +AL+D+Y K G + +AE + + +L WNAI+ GY +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080
Query: 295 DMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL F M M +P + +TL + A +++G +I + +K G
Sbjct: 1081 RKALEHFSLMHEM---GIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWV 1136
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ V+D+ + G + A E+ E+ RP W +++
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMIS 1173
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 165/369 (44%), Gaps = 34/369 (9%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN--A 86
GK+ HA + SG + D ++ + MYSK G A ++FD+ +R+L TWN+ ++
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 87 VLGGRPKNAIDAFIN---LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
+N ++ F LR G +T L C +Q+ +HG+ V+ GF+
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
++ V LV+ Y K VG A+++FD + +++ V W ML YV+N ++ + F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
R G P + V+ + + R HA VKA + M+
Sbjct: 810 HRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYA----------MKMF------ 851
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
F++ N+ WN + + H G A+ F+ T +R + VTLV +LS
Sbjct: 852 -----PFDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFK--TLLRSTIGHDSVTLVIILS 902
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
A A ++ G +I +++ +K P ++++ +AG+V A + P I
Sbjct: 903 AAVGADDLDLGEQI-HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 384 SVWGALLNA 392
S W ++++
Sbjct: 962 S-WNTMISS 969
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 7/201 (3%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+LG++ H +V SG + + N L+ Y KC + A+ VFD D++ V+W S+L
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 187 YVQ----NYEEE-NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
Y Q +YE G ++F R G ++ +L C +++ +VH AVK
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
E ++FV ALV++Y K G + A + F+KMPER+ V WN ++ Y D AL F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 302 EEMTSMRCEAVPNYVTLVCVL 322
R P++ L CV+
Sbjct: 807 SAF--HRSGFFPDFSNLHCVI 825
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/593 (39%), Positives = 355/593 (59%), Gaps = 12/593 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSAL---HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+ R+ + P+ FT + +A S G Q+H A+K G I+D FV + D+YSK
Sbjct: 986 LLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSK 1045
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G D+A+ + + +LA+WNA + + + + A++ F + G D IT
Sbjct: 1046 GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ A L+ G+Q+ + ++ GF+ ++ V +G++D Y KC ++ A +F I ++
Sbjct: 1106 IKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y++N +E++ ++ R GV+P ++ ++++ A + + LE G+ +HA
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + FVG++LVDMY KCGS+QDA F KM R +V WNA++ G A GH D A
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEA 1285
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F M S + P+ VT + VLSACS +G + K F +M YGI P EHY+C+
Sbjct: 1286 LNLFRTMQSNGIQ--PDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCL 1343
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VD LGRAG + A +I MP + + S++ ALL ACR G E + AD L LDP+DS
Sbjct: 1344 VDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDS 1403
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VLLSN++AA+ +W++ R MK +KK G SWI VKN++H+F D SH + +
Sbjct: 1404 SAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQAS 1463
Query: 478 ----EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+I+ ++ ++REE Y+PDT+F L DVEEEEK + +HSEK+A+AFGLI+ PP
Sbjct: 1464 LIYEKIEDLMKRIREE---GSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPP 1520
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+CGDCHSA K IS + RE+++RD NRFH F +G CSC DYW
Sbjct: 1521 SATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 19/418 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ R I + T + A+ G+Q+HAL +KS V V S +MYSK G+
Sbjct: 885 LLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGV 944
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+K F PE +L +WN IS+ AI F +L R G +PD T + L A
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 121 CS---DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
CS + LG Q+H + ++ G + V L+D Y K ++ A+ + G D +
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
SW +++ Y+++ + + F G+ + +++ + A + L+ G+ + A
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+K +++V S ++DMY KCG + +A F ++ + V W +I GY G D A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT-LKYGIKPGAEHY- 354
LS + MR V P+ T ++ A S A+E+G +I ++ L Y + +H+
Sbjct: 1185 LSVYH---LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFV 1237
Query: 355 -ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+VD+ + G V AY + ++M +R + W A+L +G + A NLF+
Sbjct: 1238 GTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQHGHVD----EALNLFR 1290
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 13/338 (3%)
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+K A KMF N+ WN ++ + G+ AID F L R+ D +T L+
Sbjct: 843 VKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L LG Q+H +++S F V V N L++ Y K V A+ F + + +S
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLIS 962
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-----LGRSV 234
W +M+ Y QN E F R+G++P F ++SVL AC+ G E LG V
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS--TGDEGEYFTLGSQV 1020
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H A+K + + FV +AL+D+Y K G + +AE + + +L WNAI+ GY +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080
Query: 295 DMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL F M M +P + +TL + A +++G +I + +K G
Sbjct: 1081 RKALEHFSLMHEM---GIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDLWV 1136
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ V+D+ + G + A E+ E+ RP W +++
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMIS 1173
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 165/369 (44%), Gaps = 34/369 (9%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN--A 86
GK+ HA + SG + D ++ + MYSK G A ++FD+ +R+L TWN+ ++
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 87 VLGGRPKNAIDAFIN---LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
+N ++ F LR G +T L C +Q+ +HG+ V+ GF+
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
++ V LV+ Y K VG A+++FD + +++ V W ML YV+N ++ + F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
R G P + V+ + + R HA VKA + M+
Sbjct: 810 HRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYA----------MKMF------ 851
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
F++ N+ WN + + H G A+ F+ T +R + VTLV +LS
Sbjct: 852 -----PFDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFK--TLLRSTIGHDSVTLVIILS 902
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
A A ++ G +I +++ +K P ++++ +AG+V A + P I
Sbjct: 903 AAVGADDLDLGEQI-HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 384 SVWGALLNA 392
S W ++++
Sbjct: 962 S-WNTMISS 969
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 7/201 (3%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+LG++ H +V SG + + N L+ Y KC + A+ VFD D++ V+W S+L
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 187 YVQ----NYEEE-NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
Y Q +YE G ++F R G ++ +L C +++ +VH AVK
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
E ++FV ALV++Y K G + A + F+KMPER+ V WN ++ Y D AL F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 302 EEMTSMRCEAVPNYVTLVCVL 322
R P++ L CV+
Sbjct: 807 SAF--HRSGFXPDFSNLHCVI 825
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/533 (41%), Positives = 330/533 (61%), Gaps = 3/533 (0%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY K G DA +FD+MP R++ +W I+ P AI ++ R P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F + L A C +G Q+H V+ +D +V V + L+D Y +C ++ +A +VFD ++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
KN+VSW +++ + + + E F +R G F SS+ SA ARI LE GR
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VHA +K+ + FVG+ ++ MY K GS+ DA F++M +R+LV WN ++ A G
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A++ FEE+ +C N +T + VL+ACS G V++G K ++ M Y ++P +H
Sbjct: 241 GKEAVAHFEEIR--KCGIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDH 297
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y VDLLGRAGL+ A + +MPM PT +VWGALL ACR++ ++G+ AAD++F+LD
Sbjct: 298 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELD 357
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P+D+G VLL N++A+TG+W +A VRK MK G+KK CSW+ ++N +H+F A D +H
Sbjct: 358 PDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTH 417
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
++ +I M ++ +K AGY+P+T L + E+E+ T++ +HSEKIALAF LI +P
Sbjct: 418 PKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPA 477
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IRI KN+RICGDCHSAFK++S + RE++VRD NRFH F +G CSC DYW
Sbjct: 478 GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 4/340 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF L KA+ A G+Q+HALA+K DV+VG + DMY++
Sbjct: 49 MLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD + +N +WNA I+ + + F ++R G T+ + +A
Sbjct: 109 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 168
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ GR +H L++SG V N ++ Y K + A+ VFD + ++ V+W
Sbjct: 169 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 228
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Q + F R+ G++ SVL+AC+ ++ G+ +
Sbjct: 229 NTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD 288
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
V+ I + VD+ G+ G +++A I KMP E W A++G +A M
Sbjct: 289 YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQY 348
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + + + + V L + ++ + A V K MK
Sbjct: 349 AADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMK 388
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 346/581 (59%), Gaps = 3/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P + + A + + +H+ +S D F+ S MY K G DA
Sbjct: 58 LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P R++ +W I+ P A+ ++ R P TF +FL A C
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+G Q+H V+ D +V V + L+D Y +C ++ +A VFD + KN+VSW +++
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIA 237
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ + + E F +R G F SSV SA ARI LE GR VHA +K+ +
Sbjct: 238 GFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKL 297
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
FV + ++ MY K GS+ DA F+++ +R+LV WN ++ +A G A++ FEE+
Sbjct: 298 TAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIR 357
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ N +T + VL+ACS G V++G K ++ M Y ++P +HY VDLLGRAG
Sbjct: 358 KYGIQL--NQITFLSVLTACSHGGLVKEG-KQYFDMMKDYNVEPEIDHYVSFVDLLGRAG 414
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+ A + +MPM PT +VWGALL ACR++ ++G+ AAD++F+LDP D+G VLL N
Sbjct: 415 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYN 474
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+TG+W++A VRK MK G+KK CSW+ ++N +H+F A D++H ++ EI M +
Sbjct: 475 IYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEE 534
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ +K AGY+P+T++ L ++E+E+ T++ +HSEKIALAF LI +P G IRI KN+RI
Sbjct: 535 VNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRI 594
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCHSAF+++S + RE++VRD NRFH F +G CSC DYW
Sbjct: 595 CGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 1/288 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ FTF KA+ A G+Q+HALA+K DV+VG + DMY++
Sbjct: 154 MLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQ 213
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD + +N +WNA I+ G + + F ++R G T+ + +A
Sbjct: 214 MDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSA 273
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ GR +H +++SG V N ++ Y K + A+ VFD + ++ V+W
Sbjct: 274 LARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTW 333
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML + Q + F R+ G++ SVL+AC+ ++ G+ +
Sbjct: 334 NTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD 393
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
VE I + VD+ G+ G +++A I KMP E W A++G
Sbjct: 394 YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/592 (39%), Positives = 358/592 (60%), Gaps = 17/592 (2%)
Query: 3 RECISPNDFTFPCLFKASSAL----HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
R + P+ FT + +A S+L H+ Q+HA A+K+G + D FV + D+YSK+
Sbjct: 1000 RGGLLPDQFTVASVLRACSSLGGGCHL---ATQIHACAMKAGVVLDSFVSTTLIDVYSKS 1056
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G ++A+ +F +LA+WNA + ++ G A+ +I ++ +G + IT
Sbjct: 1057 GKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAA 1116
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
A L+ G+Q+ +V+ GF+ ++ V +G++D Y KC E+ A+ +F+ I +DV
Sbjct: 1117 KAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDV 1176
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +M+ V+N +EE+ + R V+P ++ ++++ AC+ + LE GR +HA
Sbjct: 1177 AWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANT 1236
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK + FV ++LVDMY KCG+I+DA F + + WNA+I G A G+A+ AL
Sbjct: 1237 VKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEAL 1296
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
FEEM S P+ VT + VLSACS +G V + + FYSM YGI+P EHY+C+V
Sbjct: 1297 QFFEEMKSRGV--TPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLV 1354
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
D L RAG + A ++I MP + S++ LLNACRV E G+ A+ L L+P+DS
Sbjct: 1355 DALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSA 1414
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN-- 476
+VLLSN++AA +WE R M+ +KK G SW+ +KN++H+F A D SHE
Sbjct: 1415 AYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDV 1474
Query: 477 --TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+++ ++ ++REE GY+PDT+FAL DVEEE+K + +HSEK+A+A+GL+ PP
Sbjct: 1475 IYNKVEYIMKRIREE----GYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPS 1530
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+CGDCH+A K+IS + REV++RD NRFH F G CSC DYW
Sbjct: 1531 TTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 185/391 (47%), Gaps = 5/391 (1%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
TF + + L+ GKQ+H + ++SG V VG +MY KTG A +F +
Sbjct: 907 LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SLLQL 129
M E +L +WN IS L G + ++ F++L R G PD T + L ACS L
Sbjct: 967 MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
Q+H +++G + V L+D Y K ++ A+ +F + SW +M+ Y+
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIV 1086
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + ++++ + G +++ A + GL+ G+ + AV VK ++FV
Sbjct: 1087 SGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
S ++DMY KCG ++ A FN++P + V W +I G G + AL ++ M +
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKV 1206
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ P+ T ++ ACS A+E+G +I ++ T+K +VD+ + G ++
Sbjct: 1207 Q--PDEYTFATLVKACSLLTALEQGRQI-HANTVKLNCAFDPFVMTSLVDMYAKCGNIED 1263
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
A + K I+ W A++ +G E
Sbjct: 1264 ARGLFKRTNT-SRIASWNAMIVGLAQHGNAE 1293
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 5/327 (1%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
++ WN +S + G A+D F+++ + D +TF L+ + + L+LG+Q+H
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G +VRSG D VSV N L++ Y K V A+ VF + + + VSW +M+ + EE
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVAVKACVEGNIFVGSAL 253
MF+ R G+ P F ++SVL AC+ + G L +HA A+KA V + FV + L
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+D+Y K G +++AE F +L WNA++ GY G AL + M A
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERA-- 1107
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
N +TL A +++G +I ++ +K G + V+D+ + G ++ A I
Sbjct: 1108 NQITLANAAKAAGGLVGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPE 400
E+P P W +++ C G+ E
Sbjct: 1167 FNEIP-SPDDVAWTTMISGCVENGQEE 1192
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 196/464 (42%), Gaps = 48/464 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR +S T +FK P + LH A+K G DVFV + ++Y+K G
Sbjct: 718 LRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGR 777
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +FD M R++ WN + V G A+ F RTG PD +T C
Sbjct: 778 IREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARV 837
Query: 121 C-SDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
S ++L+ +QL + G ++D D +DV
Sbjct: 838 VKSKQNVLEWQLKQLKAY--------------------------GTKLFMYDDDDDGSDV 871
Query: 179 -SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+W L ++Q E F+ V +LS A + LELG+ +H +
Sbjct: 872 IAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGI 931
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
V++ ++ + VG+ L++MY K GS+ A F +M E +LV WN +I G A G + +
Sbjct: 932 VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F ++ +R +P+ T+ VL ACS G ++ +K G+ + +
Sbjct: 992 VGMFVDL--LRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK-PELGRIAADNLFKLDPND 416
+D+ ++G ++ A E + ++ W A+++ V G P+ R+ + + +
Sbjct: 1050 IDVYSKSGKMEEA-EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY---ILMQESGE 1105
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
N + L+N A G VG+K+G + VK
Sbjct: 1106 RANQITLANAAKAAGGL------------VGLKQGKQIQAVVVK 1137
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 167/395 (42%), Gaps = 42/395 (10%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L A +A +P+ GK+ HA L SG D F+ + MYSK G A K+FD P
Sbjct: 630 FSILRHAIAASDLPL-GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 73 E--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
+ R+L TWNA +S + ++ F LRR+ T C +
Sbjct: 689 DTSRDLVTWNAILS--AHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
LHG+ V+ G +V V LV+ Y K + A+V+FDG+ ++ V W M+ YV
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806
Query: 191 YEEENGCQMFLTARREGVEPKDF---MISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
E +F R G+ P D ++ V+ + + +L + + A K + +
Sbjct: 807 GLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQL-KQLKAYGTKLFMYDDD 865
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
GS +++ WN + + +G A+ F +M +
Sbjct: 866 DDGS-------------------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINS 900
Query: 308 R--CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R C+ +T V +LS + +E G +I + + ++ G+ C++++ + G
Sbjct: 901 RVACDG----LTFVVMLSVVAGLNCLELGKQI-HGIVVRSGLDQVVSVGNCLINMYVKTG 955
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
V RA + +M +S W +++ C + G E
Sbjct: 956 SVSRARTVFWQMNEVDLVS-WNTMISGCALSGLEE 989
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+++TF L KA S L G+Q+HA +K D FV S DMY+K G
Sbjct: 1201 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGN 1260
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F +A+WNA I G + A+ F ++ G PD +TF L+A
Sbjct: 1261 IEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320
Query: 121 CSDCSLL 127
CS L+
Sbjct: 1321 CSHSGLV 1327
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 339/587 (57%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR P+ FTF + S + G+Q+H LA+K+ + D+FV + D YSK
Sbjct: 235 MRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDY 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FDEMPE + ++N I+ G+ + + D F L+ T + F L+
Sbjct: 295 IDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L +GRQ H V + V V N LVD Y KC + A +F + +N V W
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ +YVQ E +MF RE V +S L A A +A + LG+ +H+ ++
Sbjct: 415 TAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++F GS LVDMY CGS++DA F +MP+RN+VCWNA+I Y+ G A+ SS
Sbjct: 475 LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSS 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ V+ + VL+ACS G VEK + F SMT Y + P +HYA ++D+
Sbjct: 535 FADM--IESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDV 592
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGN 419
L R+G + A +I EMP P +W ++LN+CR++ +L + AAD LFK+D D+
Sbjct: 593 LCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAA 652
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V +SN++A G+WE A V+K M++ G+KK SW+ + +R+H+F A D +H + +I
Sbjct: 653 YVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQI 712
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ + L E M GY PDT+ L +V+EE K+ + +HSE++A+AF LI P G PI I
Sbjct: 713 RRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIII 772
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+A K IS IVGRE+ VRD++RFH F DG CSC DYW
Sbjct: 773 MKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ TF L Q+H+ ++ G + V S D Y KT
Sbjct: 134 MCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCC 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F EMP ++ ++N I+ G + A+ F+ +R +P TF A L
Sbjct: 194 LDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGM 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ G+Q+HG +++ + ++ V N L+DFY K + + LAK +FD + + + VS+
Sbjct: 254 SVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSY 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y N + E +F + + K+F +++LS A L +GR HA AV
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVV 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ VG+ALVDMY KC +DA F + RN V W AII Y +G + AL
Sbjct: 374 TTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKM 433
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM R + T L A + +V G K +S ++ G+ + +VD+
Sbjct: 434 FKEMN--RENVHGDQATFASTLKASANLASVSLG-KQLHSSVIRLGLLSSVFSGSVLVDM 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G + A E+ KEMP R I W AL++A G E
Sbjct: 491 YANCGSMKDAIEVFKEMPDR-NIVCWNALISAYSQNGDAE 529
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 189/424 (44%), Gaps = 46/424 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F+ M RN +W I +PK A + + + R+G +PD ITF L+ D
Sbjct: 96 ARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDD 155
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L+ Q+H ++R GF ++ V N LVD Y K + +A +F + K+ VS+ M
Sbjct: 156 TTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVM 215
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y + E ++F+ R +P F +++L + G+ +H +A+K
Sbjct: 216 ITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY 275
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+IFV +AL+D Y K I A+ F++MPE + V +N II GYA G + + F+
Sbjct: 276 VWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKR 335
Query: 304 M--TSMRCEAVPNYVTLVCV--------LSACSRAGAV---------------------- 331
+ TS + P + T++ V + + A AV
Sbjct: 336 LQGTSFDRKNFP-FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE 394
Query: 332 --EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI----SV 385
E +IF ++ + + + ++ + + G + A ++ KEM R + +
Sbjct: 395 KFEDANRIFANLAYRNSVP-----WTAIISIYVQKGFHEEALKMFKEMN-RENVHGDQAT 448
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDS-GNHVLLSNMFAATGRWEEADLVRKEMK 444
+ + L A LG+ ++ +L S + +L +M+A G ++A V KEM
Sbjct: 449 FASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP 508
Query: 445 DVGI 448
D I
Sbjct: 509 DRNI 512
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 17/295 (5%)
Query: 90 GRPKNAIDAFINLR--RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG--- 144
G + +D ++ R +TG +P++ F L + + RQL FD
Sbjct: 23 GFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQL--------FDEMPY 74
Query: 145 -NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
N S N +V Y K + A+ +F+ + +N+VSW M+ Y QN + + ++
Sbjct: 75 RNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM 134
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
R GV+P +++LS L+ +H+ ++ ++ V ++LVD Y K +
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A F++MP ++ V +N +I GY G + AL F +M +M + P+ T +L
Sbjct: 195 DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQ--PSGFTFAAMLG 252
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ V G +I + + +K ++D + +D A + EMP
Sbjct: 253 MSVGSEDVIFGQQI-HGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/612 (39%), Positives = 353/612 (57%), Gaps = 39/612 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD-- 65
P+ FP + K+ + + G+ +H ++ G D++ + +MYSK ++ +
Sbjct: 104 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTY 163
Query: 66 -KMFDE--------------------------MPERNLATWNAYISNAVLGGRPKNAIDA 98
K+FDE MP+R++ +WN IS G + DA
Sbjct: 164 KKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE---DA 220
Query: 99 FINLRRTGG---EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
+ +R G PD T + L ++ L G+++HG+ +R+G+D +V + + L+D
Sbjct: 221 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDM 280
Query: 156 YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
Y KC V + VF + + +SW S++ VQN + G + F ++P
Sbjct: 281 YAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSF 340
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
SS++ ACA + L LG+ +H +++ +GN+F+ SALVDMY KCG+I+ A F+KM
Sbjct: 341 SSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL 400
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKG 334
++V W A+I GYA GHA A+S F+ M E V PNYV + VL+ACS AG V++
Sbjct: 401 YDMVSWTAMIMGYALHGHAYDAISLFKRM---EVEGVKPNYVAFMAVLTACSHAGLVDEA 457
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
K F SMT Y I PG EHYA V DLLGR G ++ AYE I +M + PT SVW LL ACR
Sbjct: 458 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACR 517
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
V+ EL + LF +DP + G +VLLSN+++A GRW++A +R M+D G+KK C
Sbjct: 518 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPAC 577
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI +KN++H F A D SH I L L E+M+ GY+ DT L+DVEEE+K
Sbjct: 578 SWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYL 637
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSE++A+ FG+I+ P G IR+TKNLR+C DCH+A KFIS IVGRE++VRDN+RFH
Sbjct: 638 LCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHH 697
Query: 575 FWDGYCSCSDYW 586
F DG CSC D+W
Sbjct: 698 FKDGKCSCGDFW 709
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 167/325 (51%), Gaps = 4/325 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT + + + GK++H A+++G DVF+G S DMY+K DD+
Sbjct: 232 LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC 291
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +P+ + +WN+ I+ V G + F + +P+ ++F + + AC+ +
Sbjct: 292 RVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 351
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+QLHG+++RS FDGNV + + LVD Y KC + A+ +FD + + VSW +M++
Sbjct: 352 TLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIM 411
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVAVKACV 243
Y + + +F EGV+P +VL+AC+ AGL E + +++ +
Sbjct: 412 GYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH-AGLVDEAWKYFNSMTQDYRI 470
Query: 244 EGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ +A+ D+ G+ G +++A E + E W+ ++ + ++A +
Sbjct: 471 IPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSK 530
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSR 327
++ ++ + + YV L + SA R
Sbjct: 531 KLFTVDPQNIGAYVLLSNIYSAAGR 555
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 180/412 (43%), Gaps = 35/412 (8%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPER- 74
L + S++ KQLHA L++ + + +YS L D+ +F+ +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSPP 69
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
W + I G +++ FI + +G PD F + L +C+ L+ G +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGK---CNEVGLAKVVFD--------------------- 170
G ++R G ++ CN L++ Y K EV K VFD
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189
Query: 171 ----GIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
++ K D VSW +++ QN E+ M + P F +SSVL A
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L G+ +H A++ + ++F+GS+L+DMY KC + D+ F +P+ + + WN+II
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
G G D L F++M + + PN+V+ ++ AC+ + G K + ++
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIK--PNHVSFSSIMPACAHLTTLHLG-KQLHGYIIRS 366
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ +VD+ + G + A I +M + +S W A++ ++G
Sbjct: 367 RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS-WTAMIMGYALHG 417
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/587 (40%), Positives = 339/587 (57%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSAL-HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR+ +P++FTFP + KA + L H G LH+L +K+G DVFV +YSK G
Sbjct: 92 MRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNG 151
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA K+FDE+PE+N+ +W A I + G A+ F L G PD T L
Sbjct: 152 FLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILY 211
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
ACS L GR + G++ SG GNV V LVD Y KC + A+ VFDG+++K+ V
Sbjct: 212 ACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVC 271
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ Y N + +F +RE V P + + V SAC+R+ LELG +
Sbjct: 272 WSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMD 331
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
N +G+AL+D Y KCGS+ A+ F M ++ V +NA+I G A GH A
Sbjct: 332 GDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFG 391
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M + + P+ T V +L C+ AG V+ G + F M+ + + P EHY C+VD
Sbjct: 392 VFGQMVKVGMQ--PDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVD 449
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
L RAGL+ A ++I+ MPM VWGALL CR++ +L L +L+P +SG+
Sbjct: 450 LQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGH 509
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN+++A+ RW+EA+ +R + G++K GCSW+ V +H F DTSH + +I
Sbjct: 510 YVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKI 569
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L L ++++ AGY P T F L+DVEEEEK +G HSEK+A+AF LI+ IR+
Sbjct: 570 YEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRV 629
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K +S + GRE+IVRDNNRFH F +G CSC DYW
Sbjct: 630 VKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 180/359 (50%), Gaps = 24/359 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK----MFDEMPERNLATWNAYISN 85
KQ H L L+ G D ++ ++ ++ L A + +F + P N+ +N I
Sbjct: 20 KQCHCLLLRLGLHQDTYL----INLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGFDG 144
V ++A+ + ++R+ G PD TF L AC+ +G LH ++++GFD
Sbjct: 76 MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V V GLV Y K + A+ VFD I +KN VSW +++ Y+++ +F
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G+ P F + +L AC+R+ L GR + ++ GN+FV ++LVDMY KCGS++
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A F+ M E+++VCW+A+I GYA G AL F EM R P+ +V V SA
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEM--QRENVRPDCYAMVGVFSA 313
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA------CVVDLLGRAGLVDRAYEIIKEM 377
CSR GA+E G G+ G E + ++D + G V +A E+ K M
Sbjct: 314 CSRLGALELG-------NWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGM 365
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/622 (39%), Positives = 354/622 (56%), Gaps = 39/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG- 59
M + PN TFP LFK+ + KQLHA ALK V S MYS+ G
Sbjct: 118 MLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGE 177
Query: 60 ------------LKD------------------DADKMFDEMPERNLATWNAYISNAVLG 89
L+D DA ++FDE+P +++ +WNA I+ V
Sbjct: 178 LRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQS 237
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR + A+ F ++ P+ T + L+AC L+LG+ + ++ GF N+ +
Sbjct: 238 GRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV 297
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N LVD Y KC E+G A+ +FDG+ DK+ + W +M+ Y E +F RE V
Sbjct: 298 NALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT 357
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-----NIFVGSALVDMYGKCGSIQ 264
P D +VL ACA + L+LG+ VHA + ++G N+ + ++++ MY KCG ++
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAY-IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVE 416
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
AE F M R+L WNA+I G A GHA+ AL FEEM + + P+ +T V VLSA
Sbjct: 417 VAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQ--PDDITFVGVLSA 474
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C++AG VE G + F SM YGI P +HY C++DLL R+G D A ++ M M P +
Sbjct: 475 CTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGA 534
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+WG+LLNACR++G+ E G A+ LF+L+P +SG +VLLSN++A GRW++ +R ++
Sbjct: 535 IWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLN 594
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK GC+ I + +H F D H ++ I ML ++ ++ G++PDT+ LY
Sbjct: 595 DKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLY 654
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
D++EE K + HSEK+A+AFGLI+ PG IRI KNLR+C +CHSA K IS I RE+
Sbjct: 655 DMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREI 714
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
I RD NRFH F DG+CSC+D W
Sbjct: 715 IARDRNRFHHFKDGFCSCNDRW 736
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 184/409 (44%), Gaps = 41/409 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDEMPER--NLATWNAYISN 85
KQ+H+L +KSG + +F + + + +D A +F + + N+ WN I
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L P +++ F + +G P+ TF + +C+ +QLH ++ +
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID----------- 174
V L+ Y + E+ A++VFD G +D
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW +M+ YVQ+ E F + V P + SVLSAC + LELG+ +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ N+ + +ALVDMY KCG I A F+ M +++++ WN +IGGY H
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLY 341
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLK-YGIKPGA 351
+ AL FE M +R PN VT + VL AC+ GA++ G + + LK G
Sbjct: 342 EEALVLFEVM--LRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV 399
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++ + + G V+ A ++ + M R +++ W A+++ + G E
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASWNAMISGLAMNGHAE 447
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 36/326 (11%)
Query: 99 FINLRRTGGEP-DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF-- 155
F++ + P L+ LN + C + +Q+H +++SG + + L++F
Sbjct: 9 FVHFLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCA 68
Query: 156 YGKCNEVGLAKVVFDGIIDK--NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
++ A +F I + N W +++ + + +F G+ P
Sbjct: 69 LSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSH 128
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S+ +CA+ + +HA A+K + + V ++L+ MY + G ++ A + F+K
Sbjct: 129 TFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKS 188
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEM----------------------------T 305
R+ V + A+I GY +GH D A F+E+ T
Sbjct: 189 TLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFT 248
Query: 306 SMR-CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M+ + PN T+V VLSAC ++E G K S G + +VD+ +
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G + A ++ M + I +W ++
Sbjct: 308 GEIGTARKLFDGMEDKDVI-LWNTMI 332
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 344/558 (61%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+ +HA S VF+ S +Y K G DA ++FD MP R++ +W + I+
Sbjct: 83 ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P A+ + R +P+ TF + L A + +G Q+H V+ + +V V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y +C + +A VFD + KN VSW +++ + + + E MF +R G
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E F SSV SA A I LE G+ VHA +K+ + FVG+ ++DMY K GS+ DA
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ ++++V WN+++ +A G A++ FEEM +C N +T + +L+ACS
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR--KCGVHLNQITFLSILTACSHG 380
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G K ++ M +Y ++P +HY VVDLLGRAGL++ A I +MPM+PT +VWGA
Sbjct: 381 GLVKEG-KQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGA 439
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL +CR++ ++G+ AAD++F+LDP+D+G VLL N++A+TG+W+ A VRK MK G+
Sbjct: 440 LLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGV 499
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D +H R+ EI ++ +++ AGY+P+T++ L V+E
Sbjct: 500 KKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDE 559
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+E+ ++ +HSEKIALAF LI +P G IRI KN+RICGDCHSAF++IS + RE++VRD
Sbjct: 560 QERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRD 619
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F G CSC DYW
Sbjct: 620 TNRFHHFSSGSCSCGDYW 637
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 10/327 (3%)
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
+ A G ++ +D+ ++ R P L + + + AC+ L R +H L S F
Sbjct: 39 VPAAASTGIIRDTLDS-VDARELAATPRL--YHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G+V + N L+ Y KC V A+ VFDG+ ++ SW S++ Y QN + +
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R +P F +S+L A A +G +HA+ VK +++VGSAL+DMY +CG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F+++ +N V WNA+I G+A +G + L F EM EA + T V
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEA--THFTYSSVF 273
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SA + GA+E+G K ++ +K G + A ++D+ ++G + A ++ + +
Sbjct: 274 SAIAGIGALEQG-KWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 383 ISVWGALLNACRVYGKPELGRIAADNL 409
++ W ++L A YG LGR A +
Sbjct: 333 VT-WNSMLTAFAQYG---LGREAVTHF 355
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 1/287 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF L KA+ A G+Q+HAL +K DV+VG + DMY++ G
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA I+ G + + F ++R G E T+ + +A
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +++SG + V N ++D Y K + A+ VFD + K+ V+W
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML + Q F R+ GV S+L+AC+ ++ G+ + +
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIG 286
+E I +VD+ G+ G + DA + KMP + W A++G
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/586 (40%), Positives = 344/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN FT+P + + S+L G+Q+H LK+G +V+V DMY+K G
Sbjct: 464 MQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGK 523
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+F + E+++ +W A I+ + A++ F ++ G D I F + ++A
Sbjct: 524 LDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISA 583
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+Q+H SG+ ++SV N LV Y +C +V A FD I K+++SW
Sbjct: 584 CAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISW 643
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ + Q+ E +F + G E F +SA A +A ++LG+ +HA+ +K
Sbjct: 644 NSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIK 703
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V + L+ +Y KCG+I DAE F +MPE+N + WNA++ GY+ GH ALS
Sbjct: 704 TGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSL 763
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M + +PN+VT V VLSACS G V++G+K F SM +G+ P EHYACVVDL
Sbjct: 764 FEDMKQLG--VLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDL 821
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+GL+ RA ++EMP++P V LL+AC V+ ++G AA +L +L+P DS +
Sbjct: 822 LGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATY 881
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+A TG+W D R+ MKD G+KK G SWI V N +H F A D H +I
Sbjct: 882 VLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIY 941
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L E GYIP TN L D E +K HSEK+A+AFGL+++ PI +
Sbjct: 942 EYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVF 1001
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+ K++S I R ++VRD+ RFH F G CSC DYW
Sbjct: 1002 KNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 201/397 (50%), Gaps = 10/397 (2%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+C+ P+ T L A S++ + GKQ H+ A+K+G D+ + + D+Y K
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A + F N+ WN + L + F ++ G EP+ T+ + L CS
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ LG Q+H ++++GF NV V + L+D Y K ++ A +F + +K+ VSW +M
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAM 545
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y Q+ + +F + +G+ + +S +SACA I L G+ +HA +ACV
Sbjct: 546 IAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHA---QACV 602
Query: 244 EG---NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
G ++ VG+ALV +Y +CG ++DA AF+K+ ++ + WN++I G+A GH + ALS
Sbjct: 603 SGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSL 662
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M+ E N T +SA + V+ G +I ++M +K G E ++ L
Sbjct: 663 FSQMSKAGQEI--NSFTFGPAVSAAANVANVKLGKQI-HAMIIKTGHDSETEVSNVLITL 719
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G +D A EMP + IS W A+L +G
Sbjct: 720 YAKCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQHG 755
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 211/423 (49%), Gaps = 14/423 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M +E + P++ T+ + + +P +++HA + G + +FV D+Y K G
Sbjct: 160 MLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+FD + +R+ +W A +S G + A+ F + +G P F + L+
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ ++G QLHG +++ GF VCN LV Y + A+ VF+ ++ +++VS
Sbjct: 280 ACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVS 339
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ Q + ++F + ++P ++S+LSAC+ + L +G+ H+ A+
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + +I + AL+D+Y KC I+ A F N+V WN ++ Y G D
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAY---GLLDNLNE 456
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
SF+ T M+ E + PN T +L CS AV+ G +I ++ LK G + + ++
Sbjct: 457 SFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI-HTQVLKTGFQFNVYVSSVLI 515
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDPNDS 417
D+ + G +D A +I + + + +S W A+ + G + + A A NLFK + D
Sbjct: 516 DMYAKLGKLDHALKIFRRLKEKDVVS-WTAM-----IAGYAQHEKFAEALNLFK-EMQDQ 568
Query: 418 GNH 420
G H
Sbjct: 569 GIH 571
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 5/365 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +LH LK G +V + D+Y G D A +FDEMP R L+ WN + V
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL-LQLGRQLHGFLVRSGFDGNVS 147
G + F + + +PD T+ L C + ++H + G++ ++
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLF 206
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VCN L+D Y K + AK VFDG+ ++ VSW +ML Q+ EE +F G
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG 266
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P ++ SSVLSAC ++ ++G +H + +K +V +ALV +Y + G+ AE
Sbjct: 267 VYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAE 326
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
FN M +R+ V +N++I G + QG++D AL F++M + C P+ VT+ +LSACS
Sbjct: 327 QVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC-LDCLK-PDCVTVASLLSACSS 384
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
GA+ G K F+S +K G+ ++DL + + A+E + +W
Sbjct: 385 VGALLVG-KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVV-LWN 442
Query: 388 ALLNA 392
+L A
Sbjct: 443 VMLVA 447
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 12/321 (3%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F + E N A AY ++ N I+ + G + T+ L+ C
Sbjct: 28 FFQKFLEHNTALSYAYSNDE----GEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGW 83
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G +LHG +++ GF V +C L+D Y ++ A VFD + + W +L
Sbjct: 84 FSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHR 143
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-ARIAGLELGRSVHAVAVKACVEG 245
+V +F +E V+P + + VL C +HA + E
Sbjct: 144 FVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYEN 203
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV + L+D+Y K G + A+ F+ + +R+ V W A++ G + G + A+ F +M
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH 263
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGR 363
+ P Y+ VLSAC++ + G ++ + + LK G E Y C +V L R
Sbjct: 264 TSGVYPTP-YI-FSSVLSACTKVEFYKVGEQL-HGLVLKQGF--SLETYVCNALVTLYSR 318
Query: 364 AGLVDRAYEIIKEMPMRPTIS 384
G A ++ M R +S
Sbjct: 319 LGNFIPAEQVFNAMLQRDEVS 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 3/214 (1%)
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y + E NG GV +L C G +H +K
Sbjct: 43 YSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAE 102
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + L+D+Y G + A F++MP R L CWN ++ + A L F M
Sbjct: 103 VVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQ 162
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ + P+ T VL C ++ ++ T+ +G + ++DL + G
Sbjct: 163 EKVK--PDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGF 220
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ A ++ + R ++S W A+L+ G E
Sbjct: 221 LNSAKKVFDGLQKRDSVS-WVAMLSGLSQSGCEE 253
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/622 (38%), Positives = 352/622 (56%), Gaps = 38/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + ISPN TF L + + G+++H+ + G DV V + MY K
Sbjct: 271 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC 330
Query: 61 KDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINL----RRTGGEPDLITFC 115
DA + FD M +R++ +W+A I+ A G + K ++D L RR G P+ +TF
Sbjct: 331 IQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFM 390
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L ACS L+ GRQ+H + + GF+ + S+ + + Y KC + A+ VF + +K
Sbjct: 391 SILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK 450
Query: 176 NDVSWCSMLVVYVQ---------------------------NYEEENGC----QMFLTAR 204
N V+W S+L +Y++ Y + ++ + +
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EG +P I S+L AC ++ LE G+ VHA AVK +E + V ++L+ MY KCG +
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVT 570
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A F+K+ R+ V WNA++ GY G A+ F+ M R PN +T V+SA
Sbjct: 571 EARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP--PNEITFTAVISA 628
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C RAG V++G +IF M + +KPG +HY C+VDLLGRAG + A E I+ MP P IS
Sbjct: 629 CGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDIS 688
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VW ALL AC+ + +L AA ++ +L+P+++ +V LSN++A GRW+++ VRK M
Sbjct: 689 VWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMD 748
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK G S I + RIH F A+D +H I A L L +EMK AGY PD F L+
Sbjct: 749 DKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLH 808
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DV+E +K + HHSEK+A+A+GL+ PPG PIRI KNLR+CGDCH+A KFIS I RE+
Sbjct: 809 DVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREI 868
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+ RD NRFH F +G CSC D+W
Sbjct: 869 VARDANRFHYFKNGTCSCGDFW 890
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 236/494 (47%), Gaps = 52/494 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN TF + KA + + +++H + SG DV V + MYSK G
Sbjct: 170 MKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGE 229
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F +M ERN+ +W A I + A + + + + G P+ +TF + LN+
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L GR++H + G + +V V N L+ Y KCN + A+ FD + ++ +SW
Sbjct: 290 CNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISW 349
Query: 181 CSMLVVYVQN-YEEENGC----QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+M+ Y Q+ Y+++ Q+ RREGV P S+L AC+ LE GR +H
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-------------------- 275
A K E + + +A+ +MY KCGSI +AE F+KM
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLT 469
Query: 276 -----------RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLS 323
RN+V WN +I GYA G D+A FE ++SM+ E P+ VT++ +L
Sbjct: 470 SAEKVFSEMSTRNVVSWNLMIAGYAQSG--DIA-KVFELLSSMKVEGFQPDRVTIISILE 526
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AC A+E+G K+ ++ +K G++ ++ + + G V A + ++ R T+
Sbjct: 527 ACGALSALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTV 585
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGR----WEEAD 437
+ W A+L YG+ +G A D LFK L N + + + +A GR E +
Sbjct: 586 A-WNAMLAG---YGQHGIGPEAVD-LFKRMLKERVPPNEITFTAVISACGRAGLVQEGRE 640
Query: 438 LVRKEMKDVGIKKG 451
+ R +D +K G
Sbjct: 641 IFRIMQEDFRMKPG 654
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 202/386 (52%), Gaps = 5/386 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N T+ C+ + + L GK +H + G D+++G S + YSK G +++F
Sbjct: 77 NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
M R++ TW++ I+ P A D F ++ EP+ ITF + L AC++ S+L+
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
R++H + SG + +V+V L+ Y KC E+ LA +F + ++N VSW +++
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q+ + +++ + G+ P S+L++C L GR +H+ + +E ++
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL--SSFEEMTS 306
V +AL+ MY KC IQDA F++M +R+++ W+A+I GYA G+ D F+ +
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 307 MRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
MR E V PN VT + +L ACS GA+E+G +I ++ K G + + ++ + G
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEIS-KVGFESDRSLQTAIFNMYAKCG 435
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
+ A ++ +M + ++ W +LL
Sbjct: 436 SIYEAEQVFSKMENKNVVA-WASLLT 460
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 169/401 (42%), Gaps = 45/401 (11%)
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR K AI +++ G + T+ + C+ + G+ +H L G ++ +
Sbjct: 56 AGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L++FY K +V + VF + ++ V+W SM+ Y N F + +
Sbjct: 116 GNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP S+L AC + LE R +H V + +E ++ V +AL+ MY KCG I A
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F KM ERN+V W AII A + A +E+M ++ PN VT V +L++C+
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKM--LQAGISPNAVTFVSLLNSCNTP 293
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+ +G +I +S + G++ ++ + + + A E M R IS W A
Sbjct: 294 EALNRGRRI-HSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVIS-WSA 351
Query: 389 L----------------------------------------LNACRVYGKPELGRIAADN 408
+ L AC V+G E GR
Sbjct: 352 MIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411
Query: 409 LFKLD-PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
+ K+ +D + NM+A G EA+ V +M++ +
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 357/607 (58%), Gaps = 28/607 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK--------------------SGQIHD-VF 46
P++F FP + KA S L TG+Q+HA A+K G I D F
Sbjct: 90 PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTF 149
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+ MY+K G DD+ +F+ +R++ +WN IS+ R A+ F + G
Sbjct: 150 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 209
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLA 165
E D +T + L ACS L +G+++H +++R+ N V + LVD Y C +V
Sbjct: 210 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 269
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA-RREGVEPKDFMISSVLSACAR 224
+ VFD I+ + W +M+ Y +N +E +F+ + G+ P ++SV+ AC
Sbjct: 270 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 329
Query: 225 -IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A + G+ +HA A++ + +I VGSALVDMY KCG + + FN+MP +N++ WN
Sbjct: 330 SLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNV 389
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRC---EAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
+I G + AL F+ M + EA PN VT + V +ACS +G + +G+ +FY
Sbjct: 390 LIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYR 449
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKP 399
M +G++P ++HYACVVDLLGRAG ++ AYE++ MP + W +LL ACR++
Sbjct: 450 MKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNV 509
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
ELG +AA NL L+PN + ++VLLSN++++ G W +A VRK M+ +G+KK GCSWI
Sbjct: 510 ELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEF 569
Query: 460 KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHS 519
++ +H F A D SH ++ ++ L L E+M+ GY+PDT+ L++V+E+EK + HS
Sbjct: 570 RDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHS 629
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+AFG++ PPG IR+ KNLR+C DCH+A KFIS I+ RE+IVRD RFH F +G
Sbjct: 630 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGT 689
Query: 580 CSCSDYW 586
CSC DYW
Sbjct: 690 CSCGDYW 696
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 185/389 (47%), Gaps = 45/389 (11%)
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R+ A+W + + + AI +I + +G PD F A L A S L+ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 132 QLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVG--------------------LAKVVFD 170
Q+H V+ G+ +V+V N LV+ YGKC +G +K +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+D++ VSW +M+ + Q+ F EGVE I+SVL AC+ + L++
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 231 GRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
G+ +HA ++ +E N FVGSALVDMY C ++ F+ + R + WNA+I GY
Sbjct: 233 GKEIHAYVLRNNDLIE-NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA-GAVEKGMKIFYSMTLKYGI 347
A G + AL F EM + +PN T+ V+ AC + A+ KG +I ++ ++ +
Sbjct: 292 ARNGLDEKALILFIEMIKV-AGLLPNTTTMASVMPACVHSLAAIAKGKEI-HAYAIRNML 349
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
+ +VD+ + G ++ + + EMP + I+ W L+ AC ++GK E A
Sbjct: 350 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT-WNVLIMACGMHGKGE----EAL 404
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
LFK NM A GR EA
Sbjct: 405 ELFK-------------NMVAEAGRGGEA 420
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/619 (38%), Positives = 349/619 (56%), Gaps = 35/619 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ ++F P + KA + GK++H LK G DVFVG + MY +
Sbjct: 115 LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 174
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD+M ER++ +W+ I + A++ + P + + +N
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSV--CNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+D + +++G+ +H +++R+ + ++ V L+D Y KC +GLA+ +F+G+ K V
Sbjct: 235 FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV 294
Query: 179 SWCSM-------------------------------LVVYVQNYEEENGCQMFLTARREG 207
SW +M L Y Q + +F R G
Sbjct: 295 SWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 354
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P I S+LS CA L+LG+ VH+ K VE + + +ALVDMY KCG I A
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 414
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F + R++ WNAII G+A G+ + AL F EM R PN +T + +L ACS
Sbjct: 415 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME--RQGVKPNDITFIGLLHACSH 472
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AG V +G K+F M +G+ P EHY C+VDLLGRAGL+D A+E+IK MP++P VWG
Sbjct: 473 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 532
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
AL+ ACR++ P+LG +AA L +++P + G +VL+SN++AA RW +A VRK MK VG
Sbjct: 533 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVG 592
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK G S I V +H F D SH + I ML ++R ++ AGY+PDT+ L +++
Sbjct: 593 MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 652
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EEEK T + +HSEK+A+AFGLI+ P PIRI KNLR+C DCH+A K +S I GR +IVR
Sbjct: 653 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 712
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F +GYCSC DYW
Sbjct: 713 DRNRFHHFREGYCSCGDYW 731
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 201/446 (45%), Gaps = 58/446 (13%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P P + L KQ+HA +K+ H + + + F +GL A
Sbjct: 37 NPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDF----PSGLSPSAQ- 91
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
WN I++ +P+NA++ + LR+ E D + L AC S
Sbjct: 92 ------------WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSW 139
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
QLG+++HGF+++ G D +V V N L+ YG+C V A++VFD +++++ VSW +M+
Sbjct: 140 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS 199
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+N E + ++ V P + + S+++ A A + +G+++HA ++ +
Sbjct: 200 LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEH 259
Query: 247 IFV--GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG----------------- 287
+ V +AL+DMY KCG + A FN + ++ +V W A+I G
Sbjct: 260 MGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDST 319
Query: 288 --------------YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVE 332
YA D A + F++ MR V P VT+V +LS C+ AGA++
Sbjct: 320 QNRDVMIWTAMLSAYAQANCIDQAFNLFDQ---MRTSGVRPTKVTIVSLLSLCAVAGALD 376
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN- 391
G K +S K ++ +VD+ + G ++ A + E R I +W A++
Sbjct: 377 LG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR-DICMWNAIITG 434
Query: 392 -ACRVYGKPELGRIAADNLFKLDPND 416
A YG+ L A + PND
Sbjct: 435 FAMHGYGEEALDIFAEMERQGVKPND 460
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/610 (39%), Positives = 349/610 (57%), Gaps = 26/610 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--- 57
+R ISP+ FP L +AS+ + LHA ++ G D++ + +MYSK
Sbjct: 67 LRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHP 126
Query: 58 -------------------TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
+ D K+FD MP R++ +WN I+ G + A++
Sbjct: 127 HLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNM 186
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
+ + PD T + L ++ + + G+++HG+ +R GFD +V + + L+D Y K
Sbjct: 187 VKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAK 246
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
C +V L+ F + +++ +SW S++ VQN + G F +E V+P SSV
Sbjct: 247 CTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSV 306
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK--MPER 276
+ ACA + L LG+ +HA ++ + N F+ S+L+DMY KCG+I+ A FNK M +R
Sbjct: 307 IPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDR 366
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W AII G A GHA A+S FEEM + P YV + VL+ACS AG V++G K
Sbjct: 367 DMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK--PCYVAFMAVLTACSHAGLVDEGWK 424
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
F SM +G+ PG EHYA V DLLGRAG ++ AY+ I M PT SVW LL ACR +
Sbjct: 425 YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH 484
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSW 456
EL + + +DP + G HV++SN+++A RW +A +R M+ G+KK CSW
Sbjct: 485 KNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW 544
Query: 457 ISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVG 516
I V N++H F A D SH +I L L E+M+ GY+ DTN L+DV+EE K +
Sbjct: 545 IEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLR 604
Query: 517 HHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFW 576
HSE++A+AFG+I+ G IR+ KN+R+C DCH+A KF++ IVGRE+IVRDN+RFH F
Sbjct: 605 THSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFK 664
Query: 577 DGYCSCSDYW 586
+G CSC DYW
Sbjct: 665 NGSCSCGDYW 674
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 28/332 (8%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G ++++ +F LR G PD F + L A + L + LH ++R GF ++
Sbjct: 55 GLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTA 114
Query: 150 NGLVDFYGKCN----------------------EVGLAKVVFDGIIDKNDVSWCSMLVVY 187
N L++ Y K + ++ + +FD + ++ VSW +++
Sbjct: 115 NALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGN 174
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN E M +E + P F +SS+L A + G+ +H A++ + ++
Sbjct: 175 AQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDV 234
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+GS+L+DMY KC ++ + AF+ + R+ + WN+II G G D L F M +
Sbjct: 235 FIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRM--L 292
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ + P V+ V+ AC+ A+ G K ++ ++ G + ++D+ + G +
Sbjct: 293 KEKVKPMQVSFSSVIPACAHLTALNLG-KQLHAYIIRLGFDDNKFIASSLLDMYAKCGNI 351
Query: 368 DRAYEIIKEMPM--RPTISVWGALLNACRVYG 397
A I ++ M R +S W A++ C ++G
Sbjct: 352 KMARYIFNKIEMCDRDMVS-WTAIIMGCAMHG 382
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 26/260 (10%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A++V + ++W ++ Y + + F R G+ P + S+L A
Sbjct: 29 AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTL 88
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG----------------------S 262
L +S+HA ++ +++ +AL++MY K
Sbjct: 89 FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVK 148
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
I F++MP R++V WN +I G A G + AL+ +EM P+ TL +L
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLR--PDSFTLSSIL 206
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
+ V KG +I + +++G + ++D+ + V+ + + R
Sbjct: 207 PIFTEHANVTKGKEI-HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 383 ISVWGALLNACRVYGKPELG 402
IS W +++ C G+ + G
Sbjct: 266 IS-WNSIIAGCVQNGRFDQG 284
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/654 (37%), Positives = 358/654 (54%), Gaps = 70/654 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ P + K +AL TGKQ+H AL SG D V S MY +
Sbjct: 65 MLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDH 124
Query: 61 KDDADKMFDEMP-----------------------------------ERNLATWNAYISN 85
DA +FD++P E NL +WN IS
Sbjct: 125 LKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISG 184
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G +A+ F N+ G +PD + + L A D + +G Q+H ++++ G +
Sbjct: 185 FNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPD 244
Query: 146 VSVCNGLVDFYGKC----------NE-----VGLAKVVFDGI------------------ 172
V + L+D YGKC NE VG + G+
Sbjct: 245 KFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKG 304
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+D N VSW SM+ QN ++ ++F + EGV+P I +L AC IA L G+
Sbjct: 305 MDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGK 364
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+ H +++ + +++VGSAL+DMY KCG + + + F+ MP RNLV WN+++ GYA G
Sbjct: 365 AAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHG 424
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A++ FE M RC P++V+ CVLSAC++ G E+G F SM+ +G++ E
Sbjct: 425 KTFEAINIFELMQ--RCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARME 482
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY+C+V LLGR+G ++ AY +IK+MP P VWGALL++CRV+ + +LG IAA +F+L
Sbjct: 483 HYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFEL 542
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P + GN++LLSN++A+ W E D+VR M+ G+KK G SWI +KN++H+ A D+S
Sbjct: 543 EPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSS 602
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H + +I L KL EMK +GY+P T+F L DVEE++K + HSEK+A+ GL+
Sbjct: 603 HPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTK 662
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG P+++ KNLRIC DCH+ KFIS RE+ VRD NRFH+F G CSC DYW
Sbjct: 663 PGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 154/385 (40%), Gaps = 72/385 (18%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+ I F + G PD + C+ S LQ G+Q+H F + SG + V + L+
Sbjct: 57 HVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLL 116
Query: 154 DFYGKCNEVGLAKVVFDGI-----------------------------------IDKNDV 178
Y + + + A+ VFD + ++ N V
Sbjct: 117 HMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLV 176
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW M+ + ++ + MF EG++P +SSVL A + +G +H
Sbjct: 177 SWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYV 236
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K + + FV SAL+DMYGKC + FN+M E ++ NA++ G + G D AL
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296
Query: 299 SSFEEMTSMRCEAV-------------------------------PNYVTLVCVLSACSR 327
F++ M V PN VT+ C+L AC
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGN 356
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+ G K + +L+ GI + ++D+ + G + + MP R +S W
Sbjct: 357 IAALLHG-KAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVS-WN 414
Query: 388 ALLNACRVYGKPELGRIAADNLFKL 412
+L+ ++GK A N+F+L
Sbjct: 415 SLMAGYAMHGK----TFEAINIFEL 435
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/579 (41%), Positives = 342/579 (59%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + A + ++ HA A++SG V V + D Y K G A +
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP +N +WNA I G + A+ F + G + ++ A L AC + L
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G ++H LVR G D NVSV N L+ Y KC V LA VFD + + VSW +M++
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN E+ ++F + E V+P F + SV+ A A I+ R +H +++ ++ ++
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+V +AL+DMY KCG + A I FN ER+++ WNA+I GY G A+ FEEM S+
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
VPN T + VLSACS AG V++G + F SM YG++PG EHY +VDLLGRAG +
Sbjct: 459 GI--VPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D A+ I++MPM P +SV+GA+L AC+++ EL +A +F+L P + HVLL+N++
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A W++ VR M+ G++K G S I +KN IH F + T+H++ EI + L KL
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EE+KA GY+PDT+ +++DVE++ K + HSEK+A+AFGLI PG I+I KNLR+C
Sbjct: 637 EEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A K IS + GRE+I+RD RFH F DG CSC DYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 198/402 (49%), Gaps = 11/402 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF L K +A TG+ +HA G + + +MY+K DA ++FD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLG 130
P R+ WNA ++ G + A++ + ++ GE PD IT + L AC++ L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R+ H F +RSG + V+V ++D Y KC ++ A+VVFD + KN VSW +M+ Y QN
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F EGV+ D + + L AC + L+ G VH + V+ ++ N+ V
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+AL+ MY KC + A F+++ R V WNA+I G A G ++ A+ F T M+ E
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF---TRMQLE 357
Query: 311 AV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
V P+ TLV V+ A + + + + +++ + ++D+ + G V+
Sbjct: 358 NVKPDSFTLVSVIPALADISDPLQA-RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
A + R I+ W A+++ YG G+ AA LF+
Sbjct: 417 ARILFNSARERHVIT-WNAMIHG---YGSHGFGK-AAVELFE 453
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 5/307 (1%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ AF+ + G P L TF + L C+ L GR +H L G D L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR-REGVEPKDF 213
Y KC A+ VFD + ++ V+W +++ Y +N +M + + EG P
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ SVL ACA L R HA A+++ +E + V +A++D Y KCG I+ A + F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
P +N V WNA+I GYA G + AL+ F M + V+++ L AC G +++
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTD--VSVLAALQACGELGCLDE 280
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
GM++ + + ++ G+ ++ + + VD A + E+ R +S W A++ C
Sbjct: 281 GMRV-HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338
Query: 394 RVYGKPE 400
G E
Sbjct: 339 AQNGCSE 345
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + D + +A L G ++H L ++ G +V V + MYSK
Sbjct: 253 MVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKR 312
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FDE+ R +WNA I G ++A+ F ++ +PD T + + A
Sbjct: 313 VDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D S R +HG+ +R D +V V L+D Y KC V +A+++F+ +++ ++W
Sbjct: 373 LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITW 432
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+M+ Y + + ++F + G+ P + SVLSAC+ ++ GR ++
Sbjct: 433 NAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+E + +VD+ G+ G + +A KMP + L + A++G + ++A
Sbjct: 493 DYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE 552
Query: 299 SSFEEM 304
S +++
Sbjct: 553 ESAQKI 558
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/581 (41%), Positives = 342/581 (58%), Gaps = 4/581 (0%)
Query: 7 SP-NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
SP N + + L ++ + GKQLHA + G +++ + + YS +A
Sbjct: 54 SPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAH 113
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD++P+ NL WN I G + AI + + G +PD T L ACS S
Sbjct: 114 HLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALS 173
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ GR +H ++RSG++ +V V LVD Y KC V A+ VFD I+D++ V W SML
Sbjct: 174 TIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLA 233
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN + + +GV P + + +V+S+ A IA L GR +H + +
Sbjct: 234 AYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQY 293
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N V +AL+DMY KCGS++ A + F ++ E+ +V WNAII GYA G A AL FE M
Sbjct: 294 NDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM 353
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
EA P+++T V L+ACSR +++G ++ M I P EHY C+VDLLG G
Sbjct: 354 K---EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCG 410
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+D AY++I++M + P VWGALLN+C+ +G EL +A + L +L+P+DSGN+V+L+N
Sbjct: 411 QLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILAN 470
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
M+A +G+WE +R+ M D GIKK CSWI VKN+++ F + D SH + I A L +
Sbjct: 471 MYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKR 530
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L M+ AGY+PDT +DVEE+EK V HSE++A+AFGLI+ PG + ITKNLRI
Sbjct: 531 LEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRI 590
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH A KFIS I RE+ VRD NR+H F G CSC DYW
Sbjct: 591 CEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 169/346 (48%), Gaps = 7/346 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FT P + KA SAL G+ +H ++SG DVFVG + DMY+K G DA
Sbjct: 155 LKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDAR 214
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD++ +R+ WN+ ++ G P ++ + G P T +++ +D +
Sbjct: 215 HVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIA 274
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR++HGF R GF N V L+D Y KC V +A V+F+ + +K VSW +++
Sbjct: 275 CLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIIT 334
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VE 244
Y + +F +E +P L+AC+R L+ GR+++ + V+ C +
Sbjct: 335 GYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRIN 393
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNK---MPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + +VD+ G CG + +A + MP+ + W A++ G+ ++A +
Sbjct: 394 PTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVAL 451
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
E++ + + NYV L + + + V + ++ +K I
Sbjct: 452 EKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNI 497
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P + T + +S+ + G+++H + G ++ V + DMY+K G
Sbjct: 251 MAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGS 310
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F+ + E+ + +WNA I+ + G A+D F + + +PD ITF L A
Sbjct: 311 VKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKE-AQPDHITFVGALAA 369
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV 162
CS LL GR L+ +VR + V +VD G C ++
Sbjct: 370 CSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQL 412
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/574 (41%), Positives = 345/574 (60%), Gaps = 7/574 (1%)
Query: 14 PCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE 73
P + KA L + GK++H L LK G DVFV S MYS+ GL DA K+FD+MP
Sbjct: 1 PPVVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R+ +WNA IS G A+D +R G + D IT + L C+ + G+ +
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H ++++ G + + V N L++ Y K +G A+ VF G++ K+ VSW +++ Y QN
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLA 176
Query: 194 ENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+++L E + P S+L A + + L+ G +H +K C+ ++FVG+
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMYGKCG + DA F ++P +N V WNA+I Y G + AL F EM + R +
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVK-- 294
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+++T V +LSACS +G V F M +YGIKP +HY C+VDL GRAG ++ A+
Sbjct: 295 PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFN 354
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
IK+MP++P S WGALLNACR++G ELG+ A++ LF++D + G +VLLSN++A G+
Sbjct: 355 FIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGK 414
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
WE D VR +D G++K G S I + N++ +F + +H + EI L L ++K
Sbjct: 415 WEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKT 474
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
GY+PD F L DVEE+EK + HSE++A+A+G+I+ P PIRI KNLR+CGDCH+
Sbjct: 475 IGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTV 534
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KFIS I RE+IVRD++RFH F G CSC DYW
Sbjct: 535 TKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 158/326 (48%), Gaps = 14/326 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + + T + + + ++GK +H +K G ++FV + +MY+K G
Sbjct: 86 MRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGS 145
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFL 118
A K+F + +++ +WN I+ G AI+ ++ L E P+ T+ + L
Sbjct: 146 LGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYL-LMEEHEEIIPNQGTWVSIL 203
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
A S LQ G ++HG ++++ +V V L+D YGKC ++ A +F + KN V
Sbjct: 204 PAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSV 263
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHA 236
W +M+ Y + + E ++F + E V+P S+LSAC+ +GL + +
Sbjct: 264 PWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSH-SGLVSDAQWCFNM 322
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN---KMP-ERNLVCWNAIIGGYAHQG 292
+ + ++ ++ +VD++G+ G + E+AFN KMP + + W A++ G
Sbjct: 323 MEEEYGIKPSLKHYGCMVDLFGRAGEL---EMAFNFIKKMPIQPDASAWGALLNACRIHG 379
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTL 318
+ ++ + E + + E V YV L
Sbjct: 380 NIELGKHASERLFEVDSENVGYYVLL 405
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/589 (40%), Positives = 355/589 (60%), Gaps = 7/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R + N+FT+P + K ++ V G+ +H +++G D+FV + DMY+K G
Sbjct: 123 MQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R++ W A I+ RP A+ F ++ G D IT + +A
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ +HG+ V +GF G+VSV N +V Y KC V A++VFD + ++N +SW
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML Y QN + +F + +P ++SAC+ + LGR +H +
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 362
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFN--KMPERNLVCWNAIIGGYAHQGHADMAL 298
+ ++ + + +A++DMY KCG + A FN ++ ER++ WN +I GY GH AL
Sbjct: 363 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 422
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F + M+ E V PN +T +LSACS AG +++G K F MT K ++P +HYAC+
Sbjct: 423 ELF---SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACM 478
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VD+LGRAG ++ A+ +IK++P RP+ VWGALL ACR++G ELG IAA+NLF+L+P +
Sbjct: 479 VDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHT 538
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VL+SN++AA+ +W+E ++VR+ MK G+KK A S I +H F D S
Sbjct: 539 GYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYR 598
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ + L EMK GY+PD + L+DVE E+K + +HSEK+A+AFG++ + G+PI
Sbjct: 599 EVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPI 658
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++TKNLR+C DCH AFKFIS I GR++IVRD NRFH F G CSC DYW
Sbjct: 659 QVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 198/410 (48%), Gaps = 22/410 (5%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATW---NAYISNAVL-----GGRPKNAIDAFINLRRT 105
+YSK G A +FD + N+++ N +L GR AID +I ++R
Sbjct: 67 LYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM 126
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G + T+ L C+ G +HG +VR+GF ++ V LVD Y KC E+G A
Sbjct: 127 GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
VFD ++ ++ V W +M+ +Y Q +F + EG + SV SA ++
Sbjct: 187 HEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQL 246
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+ SVH AV G++ VG+++V MY KCG+++ A + F++M ERN + WN+++
Sbjct: 247 GDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSML 306
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY G ALS F +M + C+ PN VT + ++SACS G+ G K+ ++ +
Sbjct: 307 SGYTQNGRPTDALSLFNQMQASECD--PNPVTALIMVSACSYLGSKHLGRKL-HNFVISS 363
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRV--YGKPELG 402
+ ++D+ + G +D A E+ + +S W L++ V +GK L
Sbjct: 364 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 423
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAA----TGRWEEADL----VRKEMK 444
+ + ++PND +LS A GR AD+ VR EMK
Sbjct: 424 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMK 473
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/579 (41%), Positives = 342/579 (59%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + A + ++ HA A++SG V V + D Y K G A +
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP +N +WNA I G + A+ F + G + ++ A L AC + L
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G ++H LVR G D NVSV N L+ Y KC V LA VFD + + VSW +M++
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN E+ ++F + E V+P F + SV+ A A I+ R +H +++ ++ ++
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+V +AL+DMY KCG + A I FN ER+++ WNA+I GY G A+ FEEM S+
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
VPN T + VLSACS AG V++G + F SM YG++PG EHY +VDLLGRAG +
Sbjct: 459 GI--VPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D A+ I++MPM P +SV+GA+L AC+++ EL +A +F+L P + HVLL+N++
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A W++ VR M+ G++K G S I +KN IH F + T+H++ EI + L KL
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EE+KA GY+PDT+ +++DVE++ K + HSEK+A+AFGLI PG I+I KNLR+C
Sbjct: 637 EEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A K IS + GRE+I+RD RFH F DG CSC DYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 198/402 (49%), Gaps = 11/402 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF L K +A TG+ +HA G + + +MY+K DA ++FD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLG 130
P R+ WNA ++ G + A++ + ++ GE PD IT + L AC++ L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R+ H F +RSG + V+V ++D Y KC ++ A+VVFD + KN VSW +M+ Y QN
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F EGV+ D + + L AC + L+ G VH + V+ ++ N+ V
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+AL+ MY KC + A F+++ R V WNA+I G A G ++ A+ F T M+ E
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF---TRMQLE 357
Query: 311 AV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
V P+ TLV V+ A + + + + +++ + ++D+ + G V+
Sbjct: 358 NVKPDSFTLVSVIPALADISDPLQA-RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
A + R I+ W A+++ YG G+ AA LF+
Sbjct: 417 ARILFNSARERHVIT-WNAMIHG---YGSHGFGK-AAVELFE 453
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 5/307 (1%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ AF+ + G P L TF + L C+ L GR +H L G D L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR-REGVEPKDF 213
Y KC A+ VFD + ++ V+W +++ Y +N +M + + EG P
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ SVL ACA L R HA A+++ +E + V +A++D Y KCG I+ A + F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
P +N V WNA+I GYA G + AL+ F M + V+++ L AC G +++
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTD--VSVLAALQACGELGCLDE 280
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
GM++ + + ++ G+ ++ + + VD A + E+ R +S W A++ C
Sbjct: 281 GMRV-HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338
Query: 394 RVYGKPE 400
G E
Sbjct: 339 AQNGCSE 345
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + D + +A L G ++H L ++ G +V V + MYSK
Sbjct: 253 MVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKR 312
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FDE+ R +WNA I G ++A+ F ++ +PD T + + A
Sbjct: 313 VDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D S R +HG+ +R D +V V L+D Y KC V +A+++F+ +++ ++W
Sbjct: 373 LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITW 432
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+M+ Y + + ++F + G+ P + SVLSAC+ ++ GR ++
Sbjct: 433 NAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+E + +VD+ G+ G + +A KMP + L + A++G + ++A
Sbjct: 493 DYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE 552
Query: 299 SSFEEM 304
S +++
Sbjct: 553 ESAQKI 558
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 340/588 (57%), Gaps = 6/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FT P + KA + G ++H+L +K+G HDVFV S +Y K
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD++P++N+ +W A I+ + G + AI AF L G +PD + L A
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ G + ++ SG NV V L+D Y KC + A ++F + +K+ VSW
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N + +F + E ++P + + VLSACA + L+LG ++ +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR 344
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N +G+AL+DMY KCGS+ A F M +++ V WNA++ G + GHA S
Sbjct: 345 NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSL 404
Query: 301 FE--EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F E +R P+ T + +L C+ G V +G + F +M + + P EHY C+V
Sbjct: 405 FSLVEKHGIR----PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMV 460
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAGL++ A+++I MPM+P VWGALL C+++ L L +L+P +SG
Sbjct: 461 DLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSG 520
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N+V LSN+++ RWEEA+ +R MK+ I+K CSWI + +H F D SH + +
Sbjct: 521 NYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEK 580
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I A L +L E+KA G++P T F L+D+EEEEK +G+HSEK+A+AFGLIA PP IR
Sbjct: 581 IYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIR 640
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ KNLR+CGDCH A K IS I RE+I+RD NRFH F DG CSC DYW
Sbjct: 641 VVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 16/387 (4%)
Query: 30 KQLHALALKSGQIHDVF----VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
K +HA L+ D + + C A D G + + +F ++ E N+ WN I
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDF----GSTNYSKLVFSQVKEPNIFLWNTMIRG 88
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V +AI + ++R G P+ T L AC+ ++LG ++H LV++G+D +
Sbjct: 89 LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V L+ Y KC+ A VFD I DKN VSW +++ Y+ + F
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G++P F + VL+ACAR+ G + + + N+FV ++L+DMY KCG+++
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLER 268
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + F+ MPE+++V W+ +I GYA G AL F +M S + P+ T+V VLSAC
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLK--PDCYTMVGVLSAC 326
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ GA++ G+ S+ + ++D+ + G V +A+EI M + + V
Sbjct: 327 ATLGALDLGIWA-SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRV-V 384
Query: 386 WGALLNACRVYGKPELGRIAADNLFKL 412
W A++ + G + A +LF L
Sbjct: 385 WNAMMVGLSMNGHAK----AVFSLFSL 407
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/603 (40%), Positives = 350/603 (58%), Gaps = 19/603 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCS---------- 50
MR + PN FP L KAS+ L LHA ++ G D+++ +
Sbjct: 101 MRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHN 160
Query: 51 ---AFDMYSKTGLK--DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT 105
FD++ K G D K+FD MP R++ +WN I+ G A+D + +
Sbjct: 161 AGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKN 220
Query: 106 GG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G +PD T + L ++ + G+++HG+ VR+GFDG+V + + L+D Y KCN +
Sbjct: 221 GKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLEC 280
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+ F + K+ +SW S++ VQN E + G F +E V+P SSV+ ACA
Sbjct: 281 SLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAH 340
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ L LGR +H V+ + N F+ S+LVDMY KCG+I+ A F+++ +R++V W AI
Sbjct: 341 LTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAI 400
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G A GHA A+S FE M + P YV + VL+ACS AG V++G + F SM
Sbjct: 401 IMGCAMHGHALDAVSLFENM--LEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERD 458
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGR 403
+GI PG EHYA V DLLGRAG ++ AY+ I M ++PT SVW LL ACR + EL
Sbjct: 459 FGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAE 518
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
D L +D + G +VL+SN+++A RW++A +R M+ G+KK CSWI V N++
Sbjct: 519 KVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQV 578
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H F A D SH +I L L E+M+ GY+ DTN L+DV+EE K + +HSE++A
Sbjct: 579 HTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLA 638
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+A+G+I+ G IR+ KN+R+C DCH+A KFI+ IVGRE+ VRDN+RFH F +G CSC
Sbjct: 639 IAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCG 698
Query: 584 DYW 586
DYW
Sbjct: 699 DYW 701
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
+ +F ++R P+ F + L A + +L LH VR G D ++ + N L++
Sbjct: 94 SFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALIN 153
Query: 155 FYGKCNEVG---------------LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
Y K + G K VFD + ++ VSW +++ + QN M
Sbjct: 154 TYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDM 213
Query: 200 FLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+ G ++P F +SS+L A + G+ +H AV+ +G++F+GS+L+DMY
Sbjct: 214 VREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYA 273
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KC ++ + AF +P ++ + WN+II G G D L F M ++ P V+
Sbjct: 274 KCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRM--LKENVKPMAVSF 331
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V+ AC+ A+ G ++ + ++ G + +VD+ + G + A + +
Sbjct: 332 SSVIPACAHLTALSLGRQL-HGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID 390
Query: 379 MRPTISVWGALLNACRVYG 397
R ++ W A++ C ++G
Sbjct: 391 KRDMVA-WTAIIMGCAMHG 408
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W S++ Y + F + R V P + S+L A + +L S+HA
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 239 VKACVEGNIFVGSALVDMYGK---CGSIQD------------AEIAFNKMPERNLVCWNA 283
V+ ++ ++++ +AL++ Y K G + D + F+ MP R++V WN
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I G+A G AL EM + P+ TL +L + V KG +I + +
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGK-NGKLKPDSFTLSSILPIFAEHVDVNKGKEI-HGYAV 254
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ G + ++D+ + ++ + +P + IS W +++ C G+ + G
Sbjct: 255 RNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAIS-WNSIIAGCVQNGEFDRG 312
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/587 (41%), Positives = 334/587 (56%), Gaps = 5/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E P+ T+ L + K++H A++ G + D+ VG + MY + G
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGS 385
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD++ RN+ TWNA I + A+ F+ +RR G PD TF L+A
Sbjct: 386 IDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L+ +++H + + +G ++ V N LV Y KC AK VFD ++++N +W
Sbjct: 446 NVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Q+ +FL REG+ P S+LSACA LE + VH+ AV
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVN 564
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ VG+ALV MY KCGS+ DA F+ M ER++ W +IGG A G AL
Sbjct: 565 AGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDL 624
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M+ E PN + V VLSACS AG V++G + F S+T YGI+P EHY C+VD
Sbjct: 625 F---VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVD 681
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG ++ A I MP+ P + WGALL AC YG E+ AA KL P +
Sbjct: 682 LLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAST 741
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN++AATG WE+ LVR M+ GI+K G SWI V N+IH F DTSH + EI
Sbjct: 742 YVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEI 801
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L L + +KA GY+PDT L + ++E K + HSEK+A+ +GL+ P PIR+
Sbjct: 802 YAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRV 861
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS + GRE++ RD RFH F DG CSC DYW
Sbjct: 862 YKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 203/395 (51%), Gaps = 12/395 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT---GKQLHALALKSGQIHDVFVGCSAFDMYSK 57
MRRE PN+ T+ + KA + PV+ GK++HA ++SG DV V + +MY K
Sbjct: 21 MRREGGQPNEITYLSILKACCS---PVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVK 77
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G DDA +FD+M ERN+ +W I GR + A F+ ++R G P+ T+ +
Sbjct: 78 CGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSI 137
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LNA + L+ +++H V +G ++ V N LV Y K + A+VVFDG+++++
Sbjct: 138 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDI 197
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA--RIAGLELGRSVH 235
SW M+ Q+ + +FL R G P S+L+A A LE + VH
Sbjct: 198 FSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVH 257
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A KA ++ VG+AL+ MY KCGSI DA + F+ M +R+++ WNA+IGG A G
Sbjct: 258 KHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGH 317
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A + F +M VP+ T + +L+ GA E +K + ++ G+ +
Sbjct: 318 EAFTIFLKMQQEGF--VPDSTTYLSLLNTHVSTGAWE-WVKEVHKHAVEVGLVSDLRVGS 374
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V + R G +D A I ++ +R ++ W A++
Sbjct: 375 AFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 206/399 (51%), Gaps = 7/399 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE PN +T+ + A+++ K++H+ A+ +G D+ VG + MY+K+G
Sbjct: 122 MQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD M ER++ +W I GR + A F+ + R G P+L T+ + LNA
Sbjct: 182 IDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNA 241
Query: 121 CSDCSL--LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+ S L+ +++H ++GF ++ V N L+ Y KC + A++VFDG+ D++ +
Sbjct: 242 SAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVI 301
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ QN +FL ++EG P S+L+ E + VH A
Sbjct: 302 SWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHA 361
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ + ++ VGSA V MY +CGSI DA++ F+K+ RN+ WNA+IGG A Q AL
Sbjct: 362 VEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREAL 421
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S F +M R P+ T V +LSA A+E +K +S + G+ A +V
Sbjct: 422 SLFLQMR--REGFFPDATTFVNILSANVGEEALE-WVKEVHSYAIDAGLVDLRVGNA-LV 477
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G A ++ +M R ++ W +++ +G
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVER-NVTTWTVMISGLAQHG 515
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 180/365 (49%), Gaps = 13/365 (3%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G ++A+ + +RR GG+P+ IT+ + L AC L+ G+++H +++SGF +V V
Sbjct: 9 GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE 68
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LV+ Y KC + A+++FD ++++N +SW M+ + FL +REG
Sbjct: 69 TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + S+L+A A LE + VH+ AV A + ++ VG+ALV MY K GSI DA +
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL--SACSR 327
F+ M ER++ W +IGG A G A S F +M C +PN T + +L SA +
Sbjct: 189 FDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC--LPNLTTYLSILNASAITS 246
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
GA+E +K + K G ++ + + G +D A + M R IS W
Sbjct: 247 TGALE-WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVIS-WN 304
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPN----DSGNHVLLSNMFAATGRWEEADLVRKEM 443
A++ G G A K+ DS ++ L N +TG WE V K
Sbjct: 305 AMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHA 361
Query: 444 KDVGI 448
+VG+
Sbjct: 362 VEVGL 366
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 4/218 (1%)
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ Y + E+ +++ RREG +P + S+L AC L+ G+ +HA +++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++ V +ALV+MY KCGSI DA++ F+KM ERN++ W +IGG AH G A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M R +PN T V +L+A + AGA+E +K +S + G+ +V +
Sbjct: 121 QM--QREGFIPNSYTYVSILNANASAGALE-WVKEVHSHAVNAGLALDLRVGNALVHMYA 177
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++G +D A + M R S W ++ +G+ +
Sbjct: 178 KSGSIDDARVVFDGMVERDIFS-WTVMIGGLAQHGRGQ 214
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/590 (40%), Positives = 350/590 (59%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLF---KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M++E + P+ TF + K AL + G+Q+H L ++SG DV +G + +MY +
Sbjct: 578 MKKEGLEPDKITFASVLVGCKNPEALEL---GRQIHMLIIESGLQLDVNLGNALINMYIR 634
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G DA ++F + RN+ +W A I G + A + F ++ G +P TF +
Sbjct: 635 CGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSI 694
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC + L G+++ ++ SG++ + V N L+ Y K + A+ VFD + +++
Sbjct: 695 LKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDI 754
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+SW M+ Y QN Q + +GV F S+L+AC+ + LE G+ VHA
Sbjct: 755 MSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAE 814
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK ++G++ VG+AL+ MY KCGS+++A+ F+ E+N+V WNA+I YA G A A
Sbjct: 815 IVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKA 874
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F M E + P+ T +LSAC+ +G V +G +IF S+ ++G+ P EHY C
Sbjct: 875 LDFF---NCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+V LLGRAG A +I +MP P +VW LL ACR++G L AA+N KL+ +
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARN 991
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+VLLSN++AA GRW++ +R+ M+ GI+K G SWI V N IH F A D SH
Sbjct: 992 PAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 1051
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI L +L EM+ AGY PDT + L+++++E + T + HSE++A+A+GL+ PPG P
Sbjct: 1052 AEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTP 1111
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLRICGDCH+A KFIS +VGRE+I RD+NRFH F +G CSC D+W
Sbjct: 1112 IRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 216/414 (52%), Gaps = 9/414 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + N T+ + A S G+ +H+ + G DV +G S MY++ G
Sbjct: 376 MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+ MP+R+L +WNA I+ A+ + ++ G +P +TF L+A
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S G+ +H ++RSG N + N L++ Y +C + A+ VF+G ++ +SW
Sbjct: 496 CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISW 555
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ + Q+ E ++FL ++EG+EP +SVL C LELGR +H + ++
Sbjct: 556 NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ ++ +G+AL++MY +CGS+QDA F+ + RN++ W A+IGG+A QG A
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVD 359
F +M + + V + T +L AC + +++G K+ + + Y + G + ++
Sbjct: 676 FWQMQNDGFKPVKS--TFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALIS 731
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
++G + A ++ +MP R +S W ++ Y + LG A +++
Sbjct: 732 AYSKSGSMTDARKVFDKMPNRDIMS-WNKMIAG---YAQNGLGGTALQFAYQMQ 781
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 190/363 (52%), Gaps = 6/363 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K++HA +++G D+F+ +MY K DA ++F +MP R++ +WN+ IS
Sbjct: 101 AKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQ 160
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G K A F ++ G P IT+ + L AC + L+ G+++H ++ +G+ + V
Sbjct: 161 QGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRV 220
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L++ YGKC ++ A+ VF GI ++ VS+ +ML +Y Q E +F EG+
Sbjct: 221 QNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI 280
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++L A + L+ G+ +H +AV + +I VG+AL M+ +CG + A+
Sbjct: 281 PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQ 340
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSR 327
A +R++V +NA+I A GH + A FE+ MR + V N T + VL+ACS
Sbjct: 341 ALEAFADRDVVVYNALIAALAQHGHYEEA---FEQYYQMRSDGVVMNRTTYLSVLNACST 397
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ A+ G ++ +S + G + ++ + R G + RA E+ MP R IS W
Sbjct: 398 SKALGAG-ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLIS-WN 455
Query: 388 ALL 390
A++
Sbjct: 456 AII 458
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 192/390 (49%), Gaps = 4/390 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P+ T+ L A + + GK++H LA+ G D+ VG + M+ + G
Sbjct: 275 MSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGD 334
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + + +R++ +NA I+ G + A + + +R G + T+ + LNA
Sbjct: 335 VAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNA 394
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L G +H + G +V + N L+ Y +C ++ A+ +F+ + ++ +SW
Sbjct: 395 CSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISW 454
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y + + +++ + EGV+P +LSAC + G+ +H ++
Sbjct: 455 NAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILR 514
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ N + +AL++MY +CGSI +A+ F R+++ WN++I G+A G + A
Sbjct: 515 SGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKL 574
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM E P+ +T VL C A+E G +I + + ++ G++ ++++
Sbjct: 575 FLEMKKEGLE--PDKITFASVLVGCKNPEALELGRQI-HMLIIESGLQLDVNLGNALINM 631
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
R G + AYE+ + R +S W A++
Sbjct: 632 YIRCGSLQDAYEVFHSLRHRNVMS-WTAMI 660
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 190/404 (47%), Gaps = 10/404 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T+ + A + GK++H+ +++G D V S +MY K A ++
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + R++ ++N + + I F + G PD +T+ L+A + S+L
Sbjct: 241 FSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSML 300
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+++H V G + ++ V L + +C +V AK + D++ V + +++
Sbjct: 301 DEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAAL 360
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ E + + R +GV SVL+AC+ L G +H+ + ++
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G++L+ MY +CG + A FN MP+R+L+ WNAII GYA + A+ +++M S
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS- 479
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E V P VT + +LSAC+ + A G K+ + L+ GIK ++++ R G
Sbjct: 480 --EGVKPGRVTFLHLLSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGS 536
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+ A + + R IS W +++ +G E AA LF
Sbjct: 537 IMEAQNVFEGTRARDIIS-WNSMIAGHAQHGSYE----AAYKLF 575
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 145/294 (49%), Gaps = 6/294 (2%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
E + + + C+ L +++H +V +G ++ + N L++ Y KC V A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF + ++ +SW S++ Y Q ++ Q+F + G P S+L+AC A
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G+ +H+ ++A + + V ++L++MYGKC + A F+ + R++V +N ++G
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 288 YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
YA + + + + F +M+S E + P+ VT + +L A + +++G +I + + + G
Sbjct: 259 YAQKAYVEECIGLFGQMSS---EGIPPDKVTYINLLDAFTTPSMLDEGKRI-HKLAVNEG 314
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + + R G V A + ++ R + V+ AL+ A +G E
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVV-VYNALIAALAQHGHYE 367
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 339/588 (57%), Gaps = 6/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN+FT P + KA + G ++H+L +K+G HDVFV S +Y K
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA K+FD++P++N+ +W A I+ + G + AI AF L G +PD + L A
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ G + ++ SG NV V L+D Y KC + A ++F + +K+ VSW
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N + +F + E ++P + + VLSACA + L+LG ++ +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR 344
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N +G+AL+DMY KCGS+ A F M ++ V WNA++ G + GHA S
Sbjct: 345 NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSL 404
Query: 301 FE--EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F E +R P+ T + +L C+ G V +G + F +M + + P EHY C+V
Sbjct: 405 FSLVEKHGIR----PDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMV 460
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAGL++ A+++I MPM+P VWGALL C+++ L L +L+P +SG
Sbjct: 461 DLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSG 520
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N+V LSN+++ RWEEA+ +R MK+ I+K CSWI + +H F D SH + +
Sbjct: 521 NYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEK 580
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I A L +L E+KA G++P T F L+D+EEEEK +G+HSEK+A+AFGLIA PP IR
Sbjct: 581 IYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIR 640
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ KNLR+CGDCH A K IS I RE+I+RD NRFH F DG CSC DYW
Sbjct: 641 VVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 16/387 (4%)
Query: 30 KQLHALALKSGQIHDVF----VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
K +HA L+ D + + C A D G + + +F ++ E N+ WN I
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDF----GSTNYSKLVFSQVKEPNIFLWNTMIRG 88
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V +AI + ++R G P+ T L AC+ ++LG ++H LV++G+D +
Sbjct: 89 LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V L+ Y KC+ A VFD I DKN VSW +++ Y+ + F
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G++P F + VL+ACAR+ G + + + N+FV ++L+DMY KCG+++
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLER 268
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + F+ MPE+++V W+ +I GYA G AL F +M S + P+ T+V VLSAC
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLK--PDCYTMVGVLSAC 326
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ GA++ G+ S+ + ++D+ + G V +A+EI M + + V
Sbjct: 327 ATLGALDLGIWA-SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRV-V 384
Query: 386 WGALLNACRVYGKPELGRIAADNLFKL 412
W A++ + G + A +LF L
Sbjct: 385 WNAMMVGLSMNGHAK----AVFSLFSL 407
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 346/586 (59%), Gaps = 4/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ T + A + + G+ +H A +SG V V + DMY K G
Sbjct: 237 MQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGS 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F M + + +WN I G + A F+ + G P +T L A
Sbjct: 297 ARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLA 356
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G +H L + D NVSV N L+ Y KC V +A +F+ + +K +V+W
Sbjct: 357 CANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTW 415
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN + +F + +G++ F + V++A A + + +H +AV+
Sbjct: 416 NAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
AC++ N+FV +ALVDMY KCG+I+ A F+ M ER+++ WNA+I GY G L
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDL 535
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + PN +T + V+SACS +G VE+G+ +F SM Y ++P +HY+ +VDL
Sbjct: 536 FNEMQ--KGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDL 593
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A+ I+EMP++P ISV GA+L AC+++ ELG AA LFKLDP++ G H
Sbjct: 594 LGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYH 653
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A+ W++ VR M+D G+ K GCSW+ ++N IH F + T+H + +I
Sbjct: 654 VLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIY 713
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L +E+KAAGY+PD + +++DVEE+ K + HSE++A+AFGL+ PG + I
Sbjct: 714 AFLETLGDEIKAAGYVPDPD-SIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIR 772
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K+IS + GRE+IVRD RFH F +G CSC DYW
Sbjct: 773 KNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 213/423 (50%), Gaps = 16/423 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H L + +G ++FV + +Y+K D+A KMF+ M ++L +W ++
Sbjct: 164 GREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQ 223
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G K A+ + ++ G +PD +T + L A +D L++GR +HG+ RSGF+ V+V
Sbjct: 224 NGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNV 283
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+D Y KC +A++VF G+ K VSW +M+ QN E E FL EG
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGE 343
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + VL ACA + LE G VH + K ++ N+ V ++L+ MY KC + A
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAAS 403
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN + + N V WNA+I GYA G AL+ F M S + + TLV V++A +
Sbjct: 404 IFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL--DCFTLVGVITALADF 460
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+V + K + + ++ + +VD+ + G + A ++ M R I+ W A
Sbjct: 461 -SVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVIT-WNA 518
Query: 389 LLNACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+++ YG +G+ D LF + PND ++S + +G EE L+ K
Sbjct: 519 MIDG---YGTHGVGKETLD-LFNEMQKGAVKPNDITFLSVISAC-SHSGFVEEGLLLFKS 573
Query: 443 MKD 445
M++
Sbjct: 574 MQE 576
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 17/366 (4%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWN----AYISNA 86
Q+ +K+G ++ ++ K G +A ++F+ + + ++ Y N+
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLIT--FCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
LG +A+ F LR E L+ + L C + L+ GR++HG ++ +GF+
Sbjct: 125 SLG----DALCFF--LRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFES 178
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N+ V ++ Y KC ++ A +F+ + K+ VSW +++ Y QN + Q+ L +
Sbjct: 179 NLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQ 238
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G +P + S+L A A + L +GRS+H A ++ E + V +AL+DMY KCGS +
Sbjct: 239 EAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSAR 298
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A + F M + +V WN +I G A G ++ A ++F +M + VP VT++ VL A
Sbjct: 299 IARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKM--LDEGEVPTRVTMMGVLLA 356
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ G +E+G + + + K + ++ + + VD A I + T
Sbjct: 357 CANLGDLERGWFV-HKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN--LEKTNV 413
Query: 385 VWGALL 390
W A++
Sbjct: 414 TWNAMI 419
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 339/589 (57%), Gaps = 16/589 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------------ 59
+ P K+ +AL + G LHALAL+SG D F + ++Y K
Sbjct: 60 SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119
Query: 60 --LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
+ + K+FDEMPE+++ +WN + GR A+ + R G +PD T +
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L ++ + ++ G +LHGF R+GF +V V + L+D Y C + VFD + ++
Sbjct: 180 LPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA 239
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+ W SML QN + +F G++P SS++ AC +A L LG+ +HA
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ +GN+F+ S+L+DMY KCG++ A F+++ ++V W A+I G+A G A A
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREA 359
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F+ M + PN++T + VL+ACS AG V+KG K F SM+ YGI P EH+A +
Sbjct: 360 LVLFDRMELGNLK--PNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
D LGR G ++ AY I M ++PT SVW LL AC+V+ L A +F L+P
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM 477
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G+H++LSN ++++GRW EA +RK M+ G++K CSWI VKN+ H+F A D SH
Sbjct: 478 GSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYE 537
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I L E+M GY+P+T+ D+EEE+K + + HSEK+A+ FG+I+ PPG I
Sbjct: 538 RIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTI 597
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+ KFIS IVGRE+++RD NRFH F DG CSC D+W
Sbjct: 598 RVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P TF L A L + GKQLHA ++ G +VF+ S DMY K G
Sbjct: 265 MLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGN 324
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD + ++ +W A I L G + A+ F + +P+ ITF A L A
Sbjct: 325 VSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTA 384
Query: 121 CSDCSLLQLG 130
CS L+ G
Sbjct: 385 CSHAGLVDKG 394
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 352/595 (59%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P +FPC KA S+L +GKQ H A G D+FV + MYS G
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF------ 114
+DA K+FDE+P+RN+ +W + I L G +A+ F +L + D F
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGM 186
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE--VGLAKVVFDGI 172
+ ++ACS + L +H F+++ GFD VSV N L+D Y K E V +A+ +FD I
Sbjct: 187 VSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELG 231
+DK+ VS+ S++ VY Q+ +F +E V + +S+VL A + L +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIG 306
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H ++ +E ++ VG++++DMY KCG ++ A +AF++M +N+ W A+I GY
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GHA AL F M PNY+T V VL+ACS AG + G F +M ++G++PG
Sbjct: 367 GHAAKALELFPAMIDSGVR--PNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGL 424
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGRAG + +AY++I++M M P +W +LL ACR++ EL I+ LF+
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP++ G ++LLS+++A +GRW++ + VR MK+ G+ K G S + + +H+F D
Sbjct: 485 LDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H + +I L +L ++ AGY+ +T+ +DV+EEEK + HSEK+A+AFG++
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG + + KNLR+C DCH+ K IS IV RE +VRD RFH F DG+CSC DYW
Sbjct: 605 VPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 157/331 (47%), Gaps = 11/331 (3%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
++ +WN+ I++ G A+ AF ++R+ P +F + ACS + G+Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G+ ++ V + L+ Y C ++ A+ VFD I +N VSW SM+ Y N
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 195 NGCQMF--LTARREGVEPKDFMIS----SVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ +F L + F+ S SV+SAC+R+A L S+H+ +K + +
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219
Query: 249 VGSALVDMYGKCGS--IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
VG+ L+D Y K G + A F+++ +++ V +N+I+ YA G ++ A F +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ N +TL VL A S +GA+ G K + ++ G++ ++D+ + G
Sbjct: 280 EKV-VTFNCITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V+ A M + + W A++ ++G
Sbjct: 338 VETARLAFDRMKNK-NVRSWTAMIAGYGMHG 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 147/339 (43%), Gaps = 55/339 (16%)
Query: 167 VVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+F+ +DK DV SW S++ ++ + + F + R+ + P + AC+ +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+ G+ H A + +IFV SAL+ MY CG ++DA F+++P+RN+V W ++I
Sbjct: 90 LDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 286 GGYAHQGHADMALSSFEEM----TSMRCEAVPNYVTLVCVLSACSRAGAVEKGM-KIFYS 340
GY G+A A+S F+++ + + +V V+SACSR A KG+ + +S
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAA--KGLTESIHS 207
Query: 341 MTLKYGIKPGAE---------------------------------HYACVVDLLGRAGLV 367
+K G G Y ++ + ++G+
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 368 DRAYEIIKEMPMRPTIS----VWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GNH 420
+ A+++ + + ++ +L A G +G+ D + ++ D G
Sbjct: 268 NEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
++ +M+ GR E A L MK+ ++ SW ++
Sbjct: 328 II--DMYCKCGRVETARLAFDRMKNKNVR-----SWTAM 359
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/588 (38%), Positives = 350/588 (59%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ FTFP L KA S L G+ +HA + G DVFV +Y+K
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +F+ +PER + +W A +S G P A++ F ++R+ +PD + + L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVL 229
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NA + L+ GR +H +V+ G + + L Y KC +V AK++FD + N +
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +M+ Y +N MF + V P I+S +SACA++ LE RS++
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++F+ SAL+DM+ KCGS++ A + F++ +R++V W+A+I GY G A A+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S + M R PN VT + +L AC+ +G V +G F+++ + I P +HYACV+
Sbjct: 410 SLYRAME--RGGVHPNDVTFLGLLMACNHSGMVREGW-WFFNLMADHKINPQQQHYACVI 466
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D+AYE+IK MP++P ++VWGALL+AC+ + ELG AA LF +DP+++G
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
++V LSN++AA W+ VR MK+ G+ K GCSW+ V+ R+ F+ D SH R E
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I+ + + +K G++ + + +L+D+ +EE + HSE+IA+A+GLI+ P G P+R
Sbjct: 587 IERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLR 646
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
ITKNLR C +CH+A K IS +V RE++VRD NRFH F DG CSC DYW
Sbjct: 647 ITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 192/371 (51%), Gaps = 6/371 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
KQ+HA L G F+ S G A ++FD++P + WNA I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
++A+ + N++ PD TF L ACS S LQ+GR +H + R GFD +V V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 150 NGLVDFYGKCNEVGLAKVVFDG--IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
NGL+ Y KC +G A+ VF+G + ++ VSW +++ Y QN E ++F R+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+P + SVL+A + L+ GRS+HA VK +E + +L MY KCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I F+KM NL+ WNA+I GYA G+A A+ F EM + + P+ +++ +SAC++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK--DVRPDTISITSAISACAQ 335
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G++E+ + Y + + + ++D+ + G V+ A ++ + + + VW
Sbjct: 336 VGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWS 393
Query: 388 ALLNACRVYGK 398
A++ ++G+
Sbjct: 394 AMIVGYGLHGR 404
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/560 (44%), Positives = 328/560 (58%), Gaps = 5/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G QLH +K G V + YSKT L + K+FD P ++ TW++ IS+
Sbjct: 26 GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQ 85
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P A+ F + R G PD T + + S L L LH +++ +V V
Sbjct: 86 NDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFV 145
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG- 207
+ LVD Y KC +V LA+ VFD + KN VSW M+ Y Q +E +F A +
Sbjct: 146 GSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY 205
Query: 208 -VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ DF +SSVL C+ ELG+ VH + K + + FV S+L+ +Y KCG ++
Sbjct: 206 DIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGG 265
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F ++ RNL WNA++ A H FEEM R PN++T +C+L ACS
Sbjct: 266 YKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEME--RVGVKPNFITFLCLLYACS 323
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VEKG F M ++GI+PG++HYA +VDLLGRAG ++ A +IKEMPM+PT SVW
Sbjct: 324 HAGLVEKGEHCFGLMK-EHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVW 382
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
GALL CR++G EL AD +F++ SG VLLSN +AA GRWEEA RK M+D
Sbjct: 383 GALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQ 442
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
GIKK G SW+ NR+H F A D SH + EI L +L EEM AGY+ DT+F L +V
Sbjct: 443 GIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEV 502
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+ +EK + +HSE++A+AFGLI PP PIR+ KNLR+CGDCH+A KFIS GR +IV
Sbjct: 503 DGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIV 562
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RDNNRFHRF DG C+C DYW
Sbjct: 563 RDNNRFHRFEDGKCTCGDYW 582
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 11/304 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+D T P K+ +AL LHAL+LK+ HDVFVG S D Y+K G
Sbjct: 99 MLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGD 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL------ITF 114
+ A K+FDEMP +N+ +W+ I G + A +NL + E D T
Sbjct: 159 VNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEA----LNLFKRALEQDYDIRVNDFTL 214
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L CS +L +LG+Q+HG ++ FD + V + L+ Y KC V VF+ +
Sbjct: 215 SSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKV 274
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N W +ML+ Q+ ++F R GV+P +L AC+ +E G
Sbjct: 275 RNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHC 334
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGH 293
+ + +E + LVD+ G+ G +++A + +MP + W A++ G G+
Sbjct: 335 FGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGN 394
Query: 294 ADMA 297
++A
Sbjct: 395 TELA 398
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 2/279 (0%)
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
C L + L+ G QLHG +++ GF+ VC+ L++FY K N + +FD
Sbjct: 11 CKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPH 70
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ +W S++ + QN + F R G+ P D + + + A ++ L L S+
Sbjct: 71 KSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSL 130
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+++K ++FVGS+LVD Y KCG + A F++MP +N+V W+ +I GY+ G
Sbjct: 131 HALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLD 190
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ AL+ F+ + N TL VL CS + E G ++ + + K
Sbjct: 191 EEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQV-HGLCFKTSFDSSCFVA 249
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ ++ L + G+V+ Y++ +E+ +R + +W A+L AC
Sbjct: 250 SSLISLYSKCGVVEGGYKVFEEVKVR-NLGMWNAMLIAC 287
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 20/203 (9%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
I VL L G +H +K E V L++ Y K + F+ P
Sbjct: 10 ICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFP 69
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++ W+++I +A AL F M +R +P+ TL + A +V
Sbjct: 70 HKSATTWSSVISSFAQNDLPLPALRFFRRM--LRHGLLPDDHTLP------TAAKSVAAL 121
Query: 335 MKIFYSMTLKYGIKPGAEHY-----ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ +++L A H+ + +VD + G V+ A ++ EMP + +S W +
Sbjct: 122 SSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVS-WSGM 180
Query: 390 LNACRVYGKPELG-RIAADNLFK 411
+YG ++G A NLFK
Sbjct: 181 -----IYGYSQMGLDEEALNLFK 198
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 346/587 (58%), Gaps = 5/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ T + A + + G+ +H ++++G V V + DMYSK G
Sbjct: 267 MQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGS 326
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M + + +WN+ I V G P A++ F + E +T L+A
Sbjct: 327 VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHA 386
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D ++ GR +H L + +VSV N L+ Y KC V +A +F+ + K VSW
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN F + + ++P F + SV+ A A ++ L + +H + ++
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
C++ N+FV +ALVDMY KCG++ A F+ M ER++ WNA+I GY G AL
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALEL 566
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M + E + PN VT +CVLSACS +G VE+G + F SM YG++P +HY +VD
Sbjct: 567 FEKM---KKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVD 623
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRA ++ A++ I++MP+ P ISV+GA+L ACR++ ELG AA+ +F LDP+D G
Sbjct: 624 LLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGY 683
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
HVLL+N++A W++ VR M+ GI+K G S + ++N +H F + TSH + +I
Sbjct: 684 HVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKI 743
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L L +KAAGY+PDTN +++DVE+ K + HSEK+A+AF L+ PG I +
Sbjct: 744 YAFLETLGNRIKAAGYMPDTN-SVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A K+IS + RE+IVRD RFH F DG CSC DYW
Sbjct: 803 RKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 208/411 (50%), Gaps = 8/411 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L K GK++H + +G +VF +MY+K L
Sbjct: 166 MRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRL 225
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A KMFD MPER+L WN IS G K A++ + ++ G PD IT + L A
Sbjct: 226 VEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPA 285
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L++GR +HG+ +R+GF+ V+V LVD Y KC VG A+++FD + K VSW
Sbjct: 286 VADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSW 345
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQN + ++F E VE + + L ACA + +E GR VH + +
Sbjct: 346 NSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQ 405
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ V ++L+ MY KC + A F + + LV WNA+I GYA G + A+
Sbjct: 406 LELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDY 465
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ T+V V+ A + + + K + + ++ + +VD+
Sbjct: 466 FCKMQLQNIK--PDSFTMVSVIPALAELSVLPQA-KWIHGLVIRTCLDKNVFVATALVDM 522
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ G V A ++ M R ++ W A+++ YG LG+ AA LF+
Sbjct: 523 YAKCGAVHTARKLFDMMDER-HVTTWNAMIDG---YGTHGLGK-AALELFE 568
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 192/394 (48%), Gaps = 14/394 (3%)
Query: 16 LFKASSA--LHIPVTGKQLH---ALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
++K SA L + + K+LH L +K+G + ++ K G +A ++F
Sbjct: 75 VYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQP 134
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
+ ++ ++ + +A+ F +R G P + F L C D + L+ G
Sbjct: 135 IEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKG 194
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+++H L+ +GF NV G+V+ Y KC V A +FD + +++ V W +++ Y QN
Sbjct: 195 KEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQN 254
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ ++ L + EG P I S+L A A + L +GRS+H +++A E + V
Sbjct: 255 GFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVS 314
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ALVDMY KCGS+ A + F++M + +V WN++I GY G A+ F++M + E
Sbjct: 315 TALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVE 374
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
VT++ L AC+ G VE+G + + + + + ++ + + VD A
Sbjct: 375 MTN--VTVMGALHACADLGDVEQG-RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIA 431
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
EI + + + +S W A+ + G + GRI
Sbjct: 432 AEIFENLQHKTLVS-WNAM-----ILGYAQNGRI 459
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/588 (38%), Positives = 347/588 (59%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ FTFP L KA S L G+ +HA + G DVFV +Y+K
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +F+ +PER + +W A +S G P A++ F +R+ +PD + + L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NA + L+ GR +H +V+ G + + L Y KC +V AK++FD + N +
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +M+ Y +N MF + V P I+S +SACA++ LE RS++
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++F+ SAL+DM+ KCGS++ A + F++ +R++V W+A+I GY G A A+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S + M R PN VT + +L AC+ +G V +G F M + I P +HYACV+
Sbjct: 410 SLYRAME--RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVI 466
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D+AYE+IK MP++P ++VWGALL+AC+ + ELG AA LF +DP+++G
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
++V LSN++AA W+ VR MK+ G+ K GCSW+ V+ R+ F+ D SH R E
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEE 586
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I+ + + +K G++ + + +L+D+ +EE + HSE+IA+A+GLI+ P G P+R
Sbjct: 587 IERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLR 646
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
ITKNLR C +CH+A K IS +V RE++VRD NRFH F DG CSC DYW
Sbjct: 647 ITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 192/371 (51%), Gaps = 6/371 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
KQ+HA L G F+ S G A ++FD++P + WNA I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
++A+ + N++ PD TF L ACS S LQ+GR +H + R GFD +V V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 150 NGLVDFYGKCNEVGLAKVVFDG--IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
NGL+ Y KC +G A+ VF+G + ++ VSW +++ Y QN E ++F R+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+P + SVL+A + L+ GRS+HA VK +E + +L MY KCG + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I F+KM NL+ WNA+I GYA G+A A+ F EM + + P+ +++ +SAC++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK--DVRPDTISITSAISACAQ 335
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G++E+ + Y + + + ++D+ + G V+ A ++ + + + VW
Sbjct: 336 VGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWS 393
Query: 388 ALLNACRVYGK 398
A++ ++G+
Sbjct: 394 AMIVGYGLHGR 404
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 342/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P+ + A + L + + + DV +G + DMY+K G
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD M E+N+ +W+A I+ G+ + A+D F + +G PD IT + L A
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD LQ+GR +H + + G D + VC LVD YGKC E+ A+ +FD + +++ V+W
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y + +F R EGV P + +V+ ACA++ + R++ +
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ +G+A++DM+ KCG ++ A F++M E+N++ W+A+I Y + G AL
Sbjct: 362 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 421
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M +R +PN +TLV +L ACS AG VE+G++ F M Y ++ +HY CVVDL
Sbjct: 422 FPMM--LRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDL 479
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A ++I+ M + +WGA L ACR + L AA +L +L P + G++
Sbjct: 480 LGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHY 539
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++A GRWE+ R M +KK G +WI V N+ H F DT+H R+ EI
Sbjct: 540 ILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIY 599
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML L +++ GY+PDTNF L+DV+EE K+ + HSEK+A+AFGLIA P PIRI
Sbjct: 600 EMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRII 659
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+ K +S I GR +IVRD NRFH F +G CSC DYW
Sbjct: 660 KNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 206/401 (51%), Gaps = 9/401 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T P + +A L G+ +H + K G D FV + DMY K +DA +
Sbjct: 28 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 87
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD+M ER+L TW I G+ ++ F +R G PD + + AC+ +
Sbjct: 88 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 147
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
R + ++ R F +V + ++D Y KC V A+ +FD + +KN +SW +M+ Y
Sbjct: 148 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 207
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + +F G+ P ++S+L AC+ + L++GR +H + K ++ +
Sbjct: 208 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDH 267
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
FV +ALVDMYGKC I+DA F+KMPER+LV W +IGGYA G+A+ +L F++M
Sbjct: 268 FVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREE 327
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKI-FYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
VP+ V +V V+ AC++ GA+ K I Y K+ + ++D+ + G
Sbjct: 328 --GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGC 383
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
V+ A EI M + IS W A++ A YG GR A D
Sbjct: 384 VESAREIFDRMEEKNVIS-WSAMIAA---YGYHGQGRKALD 420
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 156/299 (52%), Gaps = 8/299 (2%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
N F L R G PD T + AC D LQ+GR +H + + G D + VC LV
Sbjct: 13 NCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 72
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
D Y KC E+ A+ +FD + +++ V+W M+ Y + + +F R EGV P
Sbjct: 73 DMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 132
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ +V+ ACA++ + R + + + ++ +G+A++DMY KCG ++ A F++M
Sbjct: 133 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 192
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E+N++ W+A+I Y + G AL F M S +P+ +TL +L ACS ++
Sbjct: 193 EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS--SGMLPDKITLASLLYACSDLKNLQM 250
Query: 334 GMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G ++ + + K+G+ +H+ C +VD+ G+ ++ A + +MP R ++ W ++
Sbjct: 251 G-RLIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT-WTVMI 305
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/588 (41%), Positives = 342/588 (58%), Gaps = 8/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + F + K + + KQLH +K+G D+ + + YSK
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 61 KDDADKMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA K+F M +N+ +W A IS V GR A++ F +RR G P+ T+ L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A + S Q+H +V++ ++ + SV L D Y K + A +F+ I +K+ V+
Sbjct: 405 ANAAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR-IAGLELGRSVHAVA 238
W +ML Y Q + E ++FL +EGVEP +F SSVL+ACA A +E G+ H+ +
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K+ + V SALV MY K G+I+ A F + +R+LV WN++I GYA G +L
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSL 580
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
FEEM S E + +T + V+SAC+ AG V +G + F M Y I P EHY+C+V
Sbjct: 581 KIFEEMRSKNLEL--DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMV 638
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DL RAG++++A ++I +MP ++W LL ACRV+ +LG +AA+ L L P DS
Sbjct: 639 DLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSA 698
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN++A G W+E VRK M +KK AG SWI VKN+ F A D SH ++
Sbjct: 699 AYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDR 758
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L +L +K AGY PDT + L+DVEEE K + HSE++A+AFGLIA PPG PI+
Sbjct: 759 IYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQ 818
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCH+ K IS I GR+++VRD+NRFH F G CSC DYW
Sbjct: 819 IVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 207/401 (51%), Gaps = 14/401 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN FTF + +A G Q+H + +KSG +FVG S +MYSK+ +
Sbjct: 184 MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD M RN +WN+ I+ V G A + F +R G + F +
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF---DGIIDKND 177
C++ + +QLH ++++G D ++++ L+ Y KC+E+ A +F G+ +N
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV--QNV 361
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +++ YVQN + +F RREGV P F S++L+A A ++ + +HA+
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ----IHAL 417
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK E + VG+AL D Y K G +A F + E+++V W+A++ GYA G + A
Sbjct: 418 VVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGA 477
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA-VEKGMKIFYSMTLKYGIKPGAEHYAC 356
+ F ++ E PN T VL+AC+ A VE+G K F+S ++K G +
Sbjct: 478 VKIFLQLAKEGVE--PNEFTFSSVLNACAAPTASVEQG-KQFHSCSIKSGFSNALCVSSA 534
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+V + + G ++ A E+ K R +S W ++++ +G
Sbjct: 535 LVTMYAKRGNIESANEVFKRQVDRDLVS-WNSMISGYAQHG 574
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 213/454 (46%), Gaps = 18/454 (3%)
Query: 3 RECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R SP D + C+ K L + GKQ+H +K G + DV VG S DMY KT
Sbjct: 84 RRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESV 143
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+D +++FDEM +N+ +W + ++ G + A+ F ++ G +P+ TF A L
Sbjct: 144 EDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGL 203
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ ++ G Q+H +++SG D + V N +V+ Y K V AK VFD + ++N VSW
Sbjct: 204 AADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWN 263
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ +V N + ++F R EGV+ + ++V+ CA I + + +H +K
Sbjct: 264 SMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKN 323
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + +AL+ Y KC I DA F M +N+V W AII GY G D A++
Sbjct: 324 GSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F MR E V PN+ T +L+A + + +++ +K + + D
Sbjct: 384 F---CQMRREGVRPNHFTYSTILTANAAVSPSQ-----IHALVVKTNYENSPSVGTALSD 435
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDS 417
+ G + A +I E+ I W A+L+ G E L K ++PN+
Sbjct: 436 SYSKIGDANEAAKIF-ELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEF 494
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
+L+ A T E+ K+ IK G
Sbjct: 495 TFSSVLNACAAPTASVEQG----KQFHSCSIKSG 524
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 137/264 (51%), Gaps = 4/264 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ ++FDE P++ L+ N + + K A++ F+ LRR+G D + L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+G+Q+H ++ GF +VSV LVD Y K V + VFD + KN VSW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y QN E ++F + EG++P F ++VL A +E G VH + +K+ +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ IFVG+++V+MY K + DA+ F+ M RN V WN++I G+ G + L +FE
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG---LDLEAFEL 281
Query: 304 MTSMRCEAVPNYVTL-VCVLSACS 326
MR E V T+ V+ C+
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCA 305
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 351/581 (60%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN+FT+PCL + + G+Q+H L++K+G D++V DMYSK G D A
Sbjct: 341 VRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKAR 400
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ + + +++ +W + I+ V K A++ F +++ G PD I + ++AC+
Sbjct: 401 RILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIK 460
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++ G+Q+H + SG+ +VS+ N LV+ Y +C A +F+ I K+ ++W M+
Sbjct: 461 AMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVS 520
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ Q+ E ++F+ + GV+ F S +SA A +A ++ G+ +HA +K
Sbjct: 521 GFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTS 580
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
V +AL+ +YGKCGSI+DA++ F +M ERN V WN II + G AL F++M
Sbjct: 581 ETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMK 640
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ PN VT + VL+ACS G VE+G+ F SM+ ++GI P +HYACVVD+LGRAG
Sbjct: 641 QEGLK--PNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAG 698
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+DRA + ++EMP+ VW LL+ACRV+ E+G +AA L +L+P+DS ++VLLSN
Sbjct: 699 QLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSN 758
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+A TG+W D VRK MKD G++K G SWI VKN +H F D H +I L
Sbjct: 759 AYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLAD 818
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L + + GYI F ++ E+E+K HSEK+A+AFGL+++PP +P+R+ KNLR+
Sbjct: 819 LDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRV 878
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+ KF S ++GRE+++RD RFH F +G CSC D+W
Sbjct: 879 CNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 177/386 (45%), Gaps = 4/386 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P + + A + + G+ +HA K G + VG + +Y + G A+
Sbjct: 139 VVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAE 198
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F EMP + T+N IS G ++A++ F +R +G PD +T + L AC+
Sbjct: 199 RVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+QLH +L+++G + + L+D Y KC + A +F N V W MLV
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q + +F GV P +F +L C + LG +H +++K E
Sbjct: 319 AYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFES 378
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+++V L+DMY K G + A + +++V W ++I GY AL +F++M
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
P+ + L +SAC+ A+ +G +I +S G + +V+L R G
Sbjct: 439 LFGI--WPDNIGLASAISACAGIKAMRQGQQI-HSRVYVSGYSADVSIWNALVNLYARCG 495
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
A+ + + + + I+ W +++
Sbjct: 496 RSKEAFSLFEAIEHKDKIT-WNGMVS 520
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 199/422 (47%), Gaps = 14/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +P+ T L A +++ GKQLH+ LK+G D + S D+Y K G+
Sbjct: 235 MRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGV 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F N+ WN + + D F + G P+ T+ L
Sbjct: 295 IVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRT 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG Q+H +++GF+ ++ V L+D Y K + A+ + + + K+ VSW
Sbjct: 355 CTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ + + F + G+ P + ++S +SACA I + G+ +H+
Sbjct: 415 TSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYV 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + +ALV++Y +CG ++A F + ++ + WN ++ G+A G + AL
Sbjct: 475 SGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEV 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + N T V +SA + +++G +I ++ +K G E ++ L
Sbjct: 535 FIKMYQAGVKY--NVFTFVSSISASANLADIKQGKQI-HATVIKTGCTSETEVANALISL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------LDP 414
G+ G ++ A EM R +S W ++ +C +G + A +LF L P
Sbjct: 592 YGKCGSIEDAKMQFFEMSERNHVS-WNTIITSCSQHGWG----LEALDLFDQMKQEGLKP 646
Query: 415 ND 416
ND
Sbjct: 647 ND 648
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 198/421 (47%), Gaps = 11/421 (2%)
Query: 3 RECISPNDFTFPCLFKA--SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
R+C F C + S H P+ +HA A+ G D G D+Y+K GL
Sbjct: 34 RQCRGLGSVDFACALRECRGSVKHWPLV-PVIHAKAITCGLGEDRIAGNLLIDLYAKKGL 92
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+++ R+ +W A +S G + A+ + + +G P + L+A
Sbjct: 93 VQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSA 152
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +L + GR +H + + G V N L+ Y + + LA+ VF + + V++
Sbjct: 153 CTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTF 212
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q E+ ++F R G P I+S+L+ACA I L G+ +H+ +K
Sbjct: 213 NTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLK 272
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + + + +L+D+Y KCG I +A F N+V WN ++ Y +D+A S
Sbjct: 273 AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQI--SDLA-KS 329
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M V PN T C+L C+ AG + G +I + +++K G + ++D
Sbjct: 330 FDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI-HLLSIKTGFESDMYVSGVLID 388
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC--RVYGKPELGRIAADNLFKLDPNDS 417
+ + G +D+A I++ + + +S W +++ + K L LF + P++
Sbjct: 389 MYSKYGWLDKARRILEVLEAKDVVS-WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNI 447
Query: 418 G 418
G
Sbjct: 448 G 448
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 333/594 (56%), Gaps = 21/594 (3%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--------TGLK-- 61
+ P K+ +AL + G LHALA++SG D F + ++Y K TG+
Sbjct: 52 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIV 111
Query: 62 ---------DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
+ K+FDEM ER++ +WN + GR A+ + R G PD
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T L ++C+ ++ G ++HGF R+GFD +V V + L+D Y C + VFD +
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++ + W S+L QN E +F + GV P SS++ C +A L G+
Sbjct: 232 PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGK 291
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+HA + E N+F+ S+L+DMY KCG I A F+KM ++V W A+I GYA G
Sbjct: 292 QLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHG 351
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A AL FE M A PN++T + VL+ACS AG V+KG K F SM+ YGI P E
Sbjct: 352 PAREALVLFERME--LGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLE 409
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
H+A + D LGRAG +D AY I +M ++PT SVW LL ACRV+ L A + +L
Sbjct: 410 HFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMEL 469
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P G+HV+LSNM++A+GRW EA +R+ M+ G+KK CSWI VK+++H+F A D S
Sbjct: 470 EPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRS 529
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H I L E+M G++P+T D+EEE K + HSEK+A+ FG+I+ P
Sbjct: 530 HPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTP 589
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IR+ KNLR+C DCH+ KFIS + RE++VRD NRFH F DG CSC D+W
Sbjct: 590 AGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P TF L L GKQLHA + G +VF+ S DMY K G
Sbjct: 262 MLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGE 321
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD+M ++ +W A I L G + A+ F + +P+ ITF A L A
Sbjct: 322 ISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTA 381
Query: 121 CSDCSLLQLG 130
CS L+ G
Sbjct: 382 CSHAGLVDKG 391
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/616 (38%), Positives = 344/616 (55%), Gaps = 37/616 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ + A S L +GK +H A+K G + DVFV + ++Y+ +A
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP RN+ TWN+ S V G P+ ++ F + G +PDL+T + L+ACSD
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+ +HGF VR G +V VCN L+ Y KC V A+VVFD I + SW +L
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518
Query: 186 VYVQNYEEENGCQMFLTARRE-----------------------------------GVEP 210
Y N E E G MF R+ G +P
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKP 578
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ I S+L AC+ L +G+ +H + + ++ +ALVDMY KCG + + F
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVF 638
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ MP +++ WN +I G+ ALS FE+M + P+ T CVLSACS +
Sbjct: 639 DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM--LLSMVKPDSATFTCVLSACSHSML 696
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G++IF SM+ + ++P AEHY CVVD+ RAG ++ AY I+ MPM PT W A L
Sbjct: 697 VEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFL 756
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
CRVY EL +I+A LF++DPN S N+V L N+ W EA +RK MK+ GI K
Sbjct: 757 AGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITK 816
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCSW V NR+H F A D S+ + +I L +L ++KAAGY PDT++ L+D+++EE
Sbjct: 817 TPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEE 876
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + +HSEK+A+AFG++ + IR+ KNLRICGDCH+A K++S +VG ++VRD+
Sbjct: 877 KAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSL 936
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F +G CSC D+W
Sbjct: 937 RFHHFKNGNCSCKDFW 952
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 200/387 (51%), Gaps = 4/387 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ N T + S L +GK++H ++ G + DVFV + + Y+K +A
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP R++ TWN+ S V G P+ ++ F + G +PD +T L+ACSD
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+ +HGF ++ G NV V N LV+ Y C V A+ VFD + +N ++W S+
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV + G +F GV+P +SS+L AC+++ L+ G+++H AVK +
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV +ALV++Y C +++A+ F+ MP RN+V WN++ Y + G L+ F EM
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ VT++ +L ACS ++ G K+ + +++G+ ++ L +
Sbjct: 437 LNGVK--PDLVTMLSILHACSDLQDLKSG-KVIHGFAVRHGMVEDVFVCNALLSLYAKCV 493
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNA 392
V A + +P R S W +L A
Sbjct: 494 CVREAQVVFDLIPHREVAS-WNGILTA 519
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 176/344 (51%), Gaps = 3/344 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A S L +GK +H ALK G + +VFV + ++Y +A
Sbjct: 238 VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQ 297
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP RN+ TWN+ S V G P+ ++ F + G +PD + + L ACS
Sbjct: 298 AVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLK 357
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+ +HGF V+ G +V VC LV+ Y C V A+ VFD + +N V+W S+
Sbjct: 358 DLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSS 417
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV + G +F GV+P + S+L AC+ + L+ G+ +H AV+ +
Sbjct: 418 CYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV +AL+ +Y KC +++A++ F+ +P R + WN I+ Y + L F +M
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMN 537
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
R E + +T V+ C + +E+ M+IF M G KP
Sbjct: 538 --RDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ-TMGFKP 578
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 204/401 (50%), Gaps = 4/401 (0%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R I P+ F + KA +A + KQ H A + G + DV +G + Y K
Sbjct: 32 RARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCV 91
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ R++ TWN+ + V G P+ ++ F + + + +T + L C
Sbjct: 92 EGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGC 151
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
SD L+ G+++HGF+VR G +V V + V+FY KC V A+ VFD + ++ V+W
Sbjct: 152 SDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWN 211
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
S+ YV + G +F +GV+P +S +LSAC+ + L+ G+++H A+K
Sbjct: 212 SLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKH 271
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ N+FV +ALV++Y C +++A+ F+ MP RN++ WN++ Y + G L+ F
Sbjct: 272 GMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVF 331
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + P+ + + +L ACS+ ++ G K + +K+G+ +V+L
Sbjct: 332 REMGLNGVK--PDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGMVEDVFVCTALVNLY 388
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
V A + MP R ++ W +L + G P+ G
Sbjct: 389 ANCLCVREAQTVFDLMPHRNVVT-WNSLSSCYVNCGFPQKG 428
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 155/329 (47%), Gaps = 8/329 (2%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G P AI + + R G +PD F A AC+ +Q H R G +VS+
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N + YGKC V A+ VFD ++ ++ V+W S+ YV + G +F V+
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+SS+L C+ + L+ G+ +H V+ + ++FV SA V+ Y KC +++A+
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ MP R++V WN++ Y + G L+ F EM + P+ VT+ C+LSACS
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVK--PDPVTVSCILSACSDLQ 256
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++ G K + LK+G+ +V+L V A + MP R I+ W +L
Sbjct: 257 DLKSG-KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT-WNSL 314
Query: 390 LNACRVYGKPELG----RIAADNLFKLDP 414
+ G P+ G R N K DP
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDP 343
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/619 (38%), Positives = 356/619 (57%), Gaps = 37/619 (5%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+ C+ P+ + KA ++L + K++H A++ G DV +G + DMY K +
Sbjct: 71 KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A +F+ MP R++ +W + S V G + A+ AF + G P+ +T + L AC+
Sbjct: 131 GARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
D L+ GR++HGF+VR+G GNV V + LV+ Y C + A++VFD + ++ VSW
Sbjct: 191 DLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNV 250
Query: 183 MLVVYVQNYEEENGCQMFLTARREGV---------------------------------- 208
++ Y N E E G +F EGV
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310
Query: 209 -EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P I+SVL AC + L G+ +H + ++ +ALV MY KCG ++ +
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+ M +R+ V WN +I + G+ + AL F EM PN VT VLS CS
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVR--PNSVTFTGVLSGCSH 428
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ V++G+ IF SM+ + ++P A+H++C+VD+L RAG ++ AYE IK+MP+ PT WG
Sbjct: 429 SRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWG 488
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL CRVY ELGRIAA+ LF+++ ++ GN+VLLSN+ + W EA RK M+D G
Sbjct: 489 ALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRG 548
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K GCSWI V+NR+H F D S++++ EI L + E+M+ AGY+P+T+F L DV+
Sbjct: 549 VTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVD 608
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+EEK + +HSEK+A+AFG++ + IR+ KNLRICGDCH+A KF++ IVG ++IVR
Sbjct: 609 QEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVR 668
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+ RFH F DG CSC D+W
Sbjct: 669 DSLRFHHFRDGLCSCQDFW 687
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 184/406 (45%), Gaps = 16/406 (3%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLI 112
+YS +G A +FD++P+ +L TW IS GR AI + + R + EPD +
Sbjct: 20 VYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKL 79
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ AC+ + +++H +R GF +V + N L+D YGKC A++VF+G+
Sbjct: 80 LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGM 139
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++ +SW SM YV F G P +SS+L AC + L+ GR
Sbjct: 140 PFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGR 199
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH V+ + GN+FV SALV+MY C SI+ A++ F+ M R+ V WN +I Y
Sbjct: 200 EVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNK 259
Query: 293 HADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ LS F M S E V NY + V+ C + G EK +++ M G KP
Sbjct: 260 ECEKGLSVFGRMMS---EGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQ-NSGFKPNQ 315
Query: 352 EHYACVVDLLG-----RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
V+ R G Y I ++ AL+ G EL R
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGY--IFRHWFFQDLTTTTALVFMYAKCGDLELSRRVF 373
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
+ K D ++ ++M G EEA L+ +EM D G++ +
Sbjct: 374 SMMTKRDTVSWNTMIIATSMH---GNGEEALLLFREMVDSGVRPNS 416
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ PN T + A + L GKQ+H + D+ + MY+K G
Sbjct: 306 MQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGD 365
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + ++F M +R+ +WN I + G + A+ F + +G P+ +TF L+
Sbjct: 366 LELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSG 425
Query: 121 CSDCSLLQLG 130
CS L+ G
Sbjct: 426 CSHSRLVDEG 435
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 343/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ + PN +F + GK +HA + +G + D+ V S MY+ G
Sbjct: 250 MQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGS 309
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD M R++ +W I G ++A F ++ G +PD IT+ +NA
Sbjct: 310 IEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNA 369
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L R++H + +GF ++ V LV Y KC + A+ VFD + ++ VSW
Sbjct: 370 CAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSW 429
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YV+N + F +R +EP ++L+AC + L++G ++ A+K
Sbjct: 430 SAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIK 489
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ +G+AL+ M K GS++ A F+ M R+++ WNA+IGGY+ G+A AL
Sbjct: 490 ADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYL 549
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M R PN VT V VLSACSRAG V++G + F + GI P + Y C+VDL
Sbjct: 550 FDRMLKERFR--PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDL 607
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A +IK MP++PT S+W +LL ACR++G ++ AA+ +DP D +
Sbjct: 608 LGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVY 667
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LS+M+AA G WE VRK M+ GI+K GC+WI V ++H F +D SH EI
Sbjct: 668 VQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIY 727
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L +K GYIP T L+DV E++K + +HSEK+A+A+G++++P G PIRI
Sbjct: 728 AELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIY 787
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHSA KFIS + GRE+I RD +RFH F DG CSC DYW
Sbjct: 788 KNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 208/417 (49%), Gaps = 6/417 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ TF + A S+ GK++HA + +G + D +G + MY K G
Sbjct: 149 MVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGS 208
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA ++FD + R+++T+N + G + A + F +++ G +P+ I+F + L+
Sbjct: 209 MDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG 268
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L G+ +H + +G ++ V L+ Y C + A+ VFD + ++ VSW
Sbjct: 269 CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N E+ +F T + EG++P +++ACA A L R +H+
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDI 388
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A ++ V +ALV MY KCG+I+DA F+ MP R++V W+A+IG Y G+ A +
Sbjct: 389 AGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFET 448
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M E P+ VT + +L+AC GA++ GM+I Y+ +K + ++ +
Sbjct: 449 FHLMKRSNIE--PDGVTYINLLNACGHLGALDVGMEI-YTQAIKADLVSHVPLGNALIIM 505
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPN 415
+ G V+RA I M R I+ W A++ ++G D + K PN
Sbjct: 506 NAKHGSVERARYIFDTMVRRDVIT-WNAMIGGYSLHGNAREALYLFDRMLKERFRPN 561
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 218/465 (46%), Gaps = 10/465 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ LF+ + L GKQ+ ++ G+ +++ + +YS G +A ++FD +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+ + TWNA I+ G K A F + G EP +ITF + L+ACS + L G+
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H +V +GF + + LV Y K + A+ VFDG+ ++ ++ M+ Y ++
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ E ++F ++ G++P S+L C L G++VHA + A + +I V +
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
+L+ MY CGSI+ A F+ M R++V W +I GYA G+ + A F M +
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ- 357
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ +T + +++AC+ + + +I + + G +V + + G + A
Sbjct: 358 -PDRITYMHIMNACAISANLNHAREIHSQVDIA-GFGTDLLVSTALVHMYAKCGAIKDAR 415
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD-PNDSGNHVLLSNMFAAT 430
++ MP R +S W A++ A Y + G A + + N + V N+ A
Sbjct: 416 QVFDAMPRRDVVS-WSAMIGA---YVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC 471
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
G D V E+ IK S + + N + I AK S ER
Sbjct: 472 GHLGALD-VGMEIYTQAIKADL-VSHVPLGNALIIMNAKHGSVER 514
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
R A D L G D T+ C++ LG+Q+ +++ G N+ N
Sbjct: 37 RRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELN 96
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y C V A+ +FD + +K V+W +++ Y Q + +F EG+EP
Sbjct: 97 TLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEP 156
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
SVL AC+ AGL G+ VHA V A + +G+ALV MY K GS+ DA F
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ + R++ +N ++GGYA G + A F M + + PN ++ + +L C A
Sbjct: 217 DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK--PNKISFLSILDGCWTPEA 274
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G K ++ + G+ ++ + G ++ A + M +R +S W ++
Sbjct: 275 LAWG-KAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVS-WTVMI 332
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 343/587 (58%), Gaps = 5/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ ++ FTF + ++ + G+Q+H L ++ +VFV S D YSK
Sbjct: 232 MRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATS-SNVFVNNSLLDFYSKCDC 290
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K+F EM ER+ ++N I+ + F ++ + + + + L+
Sbjct: 291 LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSV 350
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +G+Q+H LV G V N L+D Y KC + AK F DK VSW
Sbjct: 351 AGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSW 410
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ VQN ++E Q+F RR G+ P SS + A + +A + LGR +H+ ++
Sbjct: 411 TAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIR 470
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++F GSAL+DMY KCG + +A F++MPERN + WNA+I YAH G A A+
Sbjct: 471 SGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKM 530
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE M C P+ VT + VLSACS G E+ MK F M +YGI P EHY+CV+D
Sbjct: 531 FE---GMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVID 587
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LGR G D+ E++ EMP +W ++L++CR +G +L R+AA+ LF + D+
Sbjct: 588 TLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATP 647
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V+LSN+FA G+WE+A V+K M+D G++K G SW+ VK++++ F + D ++ TEI
Sbjct: 648 YVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEI 707
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L +L +EM GY PDT+ L V+++ K+ + +HSE++A+AF LI PPG PIR+
Sbjct: 708 KDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRV 767
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNL C DCHSA K +S IV R++IVRD++RFH F DG+CSC DYW
Sbjct: 768 MKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 190/404 (47%), Gaps = 9/404 (2%)
Query: 1 MRRECISPNDFTFPCLFK---ASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYS 56
M RE ++P+ T + AS + LH ALK G +H V C+ D Y
Sbjct: 127 MLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYC 186
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K GL A ++F EMP R+ T+NA + G A+D F +RR G TF
Sbjct: 187 KHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFST 246
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L + L LGRQ+HG + R+ NV V N L+DFY KC+ + K +F +I+++
Sbjct: 247 VLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERD 305
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+VS+ M+ Y N ++F + + + +S+LS + + +G+ +HA
Sbjct: 306 NVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHA 365
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
V + VG+AL+DMY KCG + A+ F ++ V W A+I G G +
Sbjct: 366 QLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEE 425
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F M R P+ T + A S + G ++ +S ++ G +
Sbjct: 426 ALQLFCGMR--RAGLSPDRATFSSTIKASSNLAMIGLGRQL-HSYLIRSGHMSSVFSGSA 482
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G +D A + EMP R +IS W A+++A YG+ +
Sbjct: 483 LLDMYTKCGCLDEALQTFDEMPERNSIS-WNAVISAYAHYGQAK 525
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 182/400 (45%), Gaps = 20/400 (5%)
Query: 14 PCLFKASSALHIPVT-GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDE 70
P ++ + LH ++ G+ A AL H + F YS++G A +F
Sbjct: 32 PATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLS 91
Query: 71 MPE--RNLATWNAYISN--AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN---ACSD 123
P R+ TW I + G R +A+ F ++ R G PD +T LN A
Sbjct: 92 SPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGG 151
Query: 124 CSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ + LH F ++ G NV VCN L+D Y K + A+ VF + ++ V++ +
Sbjct: 152 TAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNA 211
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M++ + +F RR+G+ F S+VL+ + L LGR VH + +A
Sbjct: 212 MMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARA- 270
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
N+FV ++L+D Y KC + + + F++M ER+ V +N +I GYA A + L F
Sbjct: 271 TSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFR 330
Query: 303 EMTSMRC--EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
EM S+ +A+P Y +L+ V + G G +I + L G+ ++D+
Sbjct: 331 EMQSLSFDRQALP-YASLLSVAGSVPHIGI---GKQIHAQLVL-LGLSSEDLVGNALIDM 385
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G++D A + +S W A++ C G+ E
Sbjct: 386 YSKCGMLDAAKTNFINKNDKTGVS-WTAMITGCVQNGQQE 424
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/579 (39%), Positives = 345/579 (59%), Gaps = 3/579 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
++FT+P + KA L + G+++H+ + G D++VG S MY+K G A +F
Sbjct: 160 DNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVF 219
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D M ER+L +WN IS A F + + G D T L+AC+D ++
Sbjct: 220 DRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVK 279
Query: 129 LGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+ +HG+ VR+ + N N L++ Y CN + A+ +F+ + K+ VSW SM++ Y
Sbjct: 280 EGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGY 339
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+N + ++F +G P +VL AC +IA L G S+H+ VK + N
Sbjct: 340 ARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANT 399
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
VG+ALVDMY KCGS+ + F++MP+++LV W+A++ GY G A+S + M +
Sbjct: 400 IVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKAN 459
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+P+ +LSACS AG V +G +IFY M +Y +KP HY+C+VDLLGRAG +
Sbjct: 460 --SVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHL 517
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D AY II+ M ++PT +W ALL A R++ +L I+A +F ++P +++ LSN++
Sbjct: 518 DEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIY 577
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA RW++ + VR ++ G+KK GCS+I + N +H F D SH++ +I A L +L+
Sbjct: 578 AAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELK 637
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+++K AGY PDT+ YDVEEE K + HSE++A+AF LI PG IRITKNLR+CG
Sbjct: 638 QQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCG 697
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+ K IS + GRE+I+RD +RFH F G+CSC DYW
Sbjct: 698 DCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 184/372 (49%), Gaps = 6/372 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+QLHA + + ++ ++ Y+ GL A+ +FD + +N WN I
Sbjct: 78 GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G P ++ + + G D T+ L AC D L+++GR++H +V G + ++
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIY 197
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ Y K ++G A++VFD + +++ SW +M+ Y +N + +F + G
Sbjct: 198 VGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAG 257
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-NIFVGSALVDMYGKCGSIQDA 266
+ + +LSACA + ++ G+ +H AV+ + N F ++L++MY C + DA
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDA 317
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F ++ ++ V WN++I GYA G A +L F M + P+ VT + VL AC
Sbjct: 318 RRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMA--LDGSGPDQVTFIAVLGACD 375
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+ A+ GM I +S +K G +VD+ + G + + + EMP + +S W
Sbjct: 376 QIAALRYGMSI-HSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVS-W 433
Query: 387 GALLNACRVYGK 398
A++ ++G+
Sbjct: 434 SAMVAGYGLHGR 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF + A + G +H+ +K G + VG + DMYSK G + ++
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRV 421
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDEMP+++L +W+A ++ L GR + AI ++ PD F + L+ACS L+
Sbjct: 422 FDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLV 481
Query: 128 QLGRQL 133
G+++
Sbjct: 482 VEGKEI 487
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 338/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN T+ + KA ++L GK++HA G DV VG + MY K G
Sbjct: 120 MCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++FD + ++ +W I G K A + + + G +P+ IT+ + LNA
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ +++H + +G + +V V LV Y K + A+VVFD + ++ VSW
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW 299
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + ++ +FL + EG +P M S+L+ACA LE + +H A+
Sbjct: 300 NVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALD 359
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +E ++ VG+ALV MY K GSI DA + F++M RN+V WNA+I G A G AL
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEV 419
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F MT+ + P+ VT V VLSACS AG V++G + +MT YGI+P H C+VDL
Sbjct: 420 FRRMTAHGVK--PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDL 477
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A I M + P + WGALL +CR YG ELG + A KLDP ++ +
Sbjct: 478 LGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATY 537
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A G+W+ VR M++ GI+K G SWI V N+IH F D+SH EI
Sbjct: 538 VLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEIN 597
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
K+ E++KA GYIPDT L + ++K ++ HSEK+A+ +GL+ PPG PIR+
Sbjct: 598 ESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVF 657
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH A K IS + GRE+IVRD NRFH F DG CSC DYW
Sbjct: 658 KNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 196/371 (52%), Gaps = 4/371 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ KQ+H +KS + V + +Y + G +A +FD + +++ A+WNA I+
Sbjct: 45 MAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGY 104
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
V ++A+ F + G +P+ T+ L AC+ S L+ G+++H + G + +V
Sbjct: 105 VEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDV 164
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V L+ YGKC + A+ +FD +++ + +SW M+ Y Q+ + ++ L +E
Sbjct: 165 RVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQE 224
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P S+L+ACA L+ + VH A+ A +E ++ VG+ALV MY K GSI DA
Sbjct: 225 GFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDA 284
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F++M R++V WN +IG +A G A F +M + C+ P+ + + +L+AC+
Sbjct: 285 RVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCK--PDAIMFLSILNACA 342
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AGA+E KI + L G++ +V + ++G +D A + M +R +S W
Sbjct: 343 SAGALEWVKKI-HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVS-W 400
Query: 387 GALLNACRVYG 397
A+++ +G
Sbjct: 401 NAMISGLAQHG 411
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 13/360 (3%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
AI +N + G D + L C L +Q+H +++S + N V N L+
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y +C + A+ VFD ++ K+ SW +M+ YV++ E+ ++F EGV+P
Sbjct: 72 VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+L ACA ++ L+ G+ VHA +E ++ VG+AL+ MYGKCGSI +A F+ +
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEK 333
+++ W +IG YA G+ A + M M E PN +T V +L+AC+ GA+ K
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEA---YRLMLQMEQEGFKPNAITYVSILNACASEGAL-K 247
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+K + L G++ +V + ++G +D A + M +R +S W ++ A
Sbjct: 248 WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WNVMIGAF 306
Query: 394 RVYGKPELGRIAADNLFKLDPN----DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+G+ G A D ++ D+ + + N A+ G E + + D G++
Sbjct: 307 AEHGR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/586 (40%), Positives = 345/586 (58%), Gaps = 30/586 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I N FTFP + A ++ G Q+H ++SG +VFVG + DMYSK G
Sbjct: 231 MRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGD 290
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +M + M + +WN+ I V G + A+ F + + D T+ + LN
Sbjct: 291 LSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNC 350
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S ++ +H +V++GF+ V N LVD Y K A VF+ + DK+ +SW
Sbjct: 351 FSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISW 410
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ V N E ++F R G+ P +I++VLSACA + LE G+ VHA +K
Sbjct: 411 TSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLK 470
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++ V ++LV MY KCG I+DA F+ M ++++ W A+I GYA G
Sbjct: 471 SGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR----- 525
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
AG VE G F SM YGIKPG EHYAC++DL
Sbjct: 526 -------------------------DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDL 560
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G + A E++ +M ++P +VW ALL ACRV+G ELG AA+NLF+L+P ++ +
Sbjct: 561 LGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPY 620
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN+++A G+WEEA R+ MK G+ K GCSWI + +++H F ++D SH R EI
Sbjct: 621 VLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIY 680
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ + ++ +K AGY+PD NFAL+D++EE K + +HSEK+A+AFGL+ +PPG PIRI
Sbjct: 681 SKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIF 740
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+A K++SG+ R VI+RD+N FH F +G CSCSDYW
Sbjct: 741 KNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN FT+ + + S + GKQ+HA A+K+ + FV DMY+K
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188
Query: 61 KDDADKMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+A+ +F+ P+ RN W A ++ G AI+ F ++R G E + TF + L
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC S G Q+HG +VRSGF NV V + LVD Y KC ++ A+ + + + + VS
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS 308
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+V V+ E +F ++ +F SVL+ + + + SVH++ V
Sbjct: 309 WNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIV 368
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E V +ALVDMY K G A F KM +++++ W +++ G H G + AL
Sbjct: 369 KTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALR 428
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F EM M P+ + + VLSAC+ +E G ++ ++ LK G+ +V
Sbjct: 429 LFCEMRIMGIH--PDQIVIAAVLSACAELTVLEFGKQV-HANFLKSGLGSSLSVDNSLVS 485
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ + G ++ A ++ M ++ I+ W AL+
Sbjct: 486 MYAKCGCIEDANKVFDSMEIQDVIT-WTALI 515
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 176/347 (50%), Gaps = 5/347 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ +G ++A K+F E P R+ TW++ IS G A++ F ++ G P+ T+
Sbjct: 82 YANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTW 141
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L CS LL+ G+Q+H +++ FD N V GLVD Y KC + A+ +F+ D
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201
Query: 175 K-NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
K N V W +M+ Y QN + + F R EG+E F S+L+AC I+ G
Sbjct: 202 KRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQ 261
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH V++ N+FVGSALVDMY KCG + +A M + V WN++I G QG
Sbjct: 262 VHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL 321
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ ALS F M +R + + T VL+ S + M + +S+ +K G +
Sbjct: 322 GEEALSLFRIM-HLRHMKIDEF-TYPSVLNCFSFVMDMRNAMSV-HSLIVKTGFEAYKLV 378
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+VD+ + G D A+++ ++M + IS W +L+ C G E
Sbjct: 379 NNALVDMYAKRGYFDYAFDVFEKMTDKDVIS-WTSLVTGCVHNGSYE 424
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 161/381 (42%), Gaps = 56/381 (14%)
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +L + F+ G + S N ++ KC V A+ +FD + D+++ SW
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 181 CSMLVVYVQN----------YEE----------------ENGC-----QMFLTARREGVE 209
+M+ Y + YE GC ++F + EG
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F SVL C+ LE G+ +HA A+K + N FV + LVDMY KC I +AE
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 270 FNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSR 327
F P+ RN V W A++ GY+ G A+ F + MR E + N T +L+AC
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRD---MRGEGIECNQFTFPSILTACGS 252
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A G ++ + ++ G + +VD+ + G + A +++ M + +S W
Sbjct: 253 ISACGFGAQV-HGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS-WN 310
Query: 388 ALLNACRVYGKPE----LGRIAADNLFKLD----PN---------DSGNHVLLSNMFAAT 430
+++ C G E L RI K+D P+ D N + + ++ T
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKT 370
Query: 431 GRWEEADLVRKEMKDVGIKKG 451
G +E LV + D+ K+G
Sbjct: 371 G-FEAYKLVNNALVDMYAKRG 390
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 345/580 (59%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FTF + A + G+Q+H+ +K + +VFV + D YSK +A K+
Sbjct: 238 PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKL 297
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F EMPE + ++N I+ GR + +++ F L+ T + F L+ ++ L
Sbjct: 298 FYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNL 357
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++GRQ+H + + V V N LVD Y KC++ G A +F + ++ V W +++ Y
Sbjct: 358 EMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGY 417
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
VQ E+G ++F+ R + +S+L ACA +A L LG+ +H+ +++ N+
Sbjct: 418 VQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNV 477
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F GSALVDMY KCGSI++A F +MP RN V WNA+I YA G AL SFE+M
Sbjct: 478 FSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHS 537
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ PN V+ + +L ACS G VE+G++ F SMT Y ++P EHYA +VD+L R+G
Sbjct: 538 GLQ--PNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRF 595
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGNHVLLSNM 426
D A +++ MP P +W ++LN+CR++ EL AAD LF + D+ +V +SN+
Sbjct: 596 DEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNI 655
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+AA G W+ V+K +++ GI+K SW+ +K + H+F A DTSH + EI L +L
Sbjct: 656 YAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDEL 715
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++M+ GY PD+ AL++V+EE K+ + +HSE+IA+AF LI+ P G PI + KNLR C
Sbjct: 716 EKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRAC 775
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A K IS IV RE+ VRD++RFH F DG CSC DYW
Sbjct: 776 NDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 4/392 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ T L + Q+H +K G + V S D Y KT
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F M E++ T+NA ++ G +AI+ F ++ G P TF A L A
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ G+Q+H F+V+ F NV V N L+DFY K + + A+ +F + + + +S+
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ N E ++F + + + F +++LS A LE+GR +H+ A+
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ VG++LVDMY KC +A F + ++ V W A+I GY +G + L
Sbjct: 370 TDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKL 429
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM R + + T +L AC+ ++ G K +S ++ G + +VD+
Sbjct: 430 FVEM--HRAKIGADSATYASILRACANLASLTLG-KQLHSRIIRSGCLSNVFSGSALVDM 486
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A ++ +EMP+R ++S W AL++A
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVS-WNALISA 517
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 4/348 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K+G A +FD M +R++ TW I R A + F ++ R G PD IT
Sbjct: 83 YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L+ ++ + Q+HG +V+ G+D + VCN L+D Y K +GLA +F + +
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K++V++ ++L Y + + +F + G P +F ++VL+A ++ +E G+ V
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ VK N+FV +AL+D Y K I +A F +MPE + + +N +I A G
Sbjct: 263 HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRV 322
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ +L F E+ R + +LS + + +E G +I + I
Sbjct: 323 EESLELFRELQFTRFDR--RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGN 380
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ +VD+ + A I ++ + ++ W AL++ G E G
Sbjct: 381 S-LVDMYAKCDKFGEANRIFADLAHQSSVP-WTALISGYVQKGLHEDG 426
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I + T+ + +A + L GKQLH+ ++SG + +VF G + DMY+K G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +MF EMP RN +WNA IS G +A+ +F + +G +P+ ++F + L A
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
Query: 121 CSDCSLLQLGRQ 132
CS C L++ G Q
Sbjct: 553 CSHCGLVEEGLQ 564
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
NV N ++ Y K + A+ +FD ++ ++ V+W ++ Y Q+ +F
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
R G+ P ++++LS + VH VK + + V ++L+D Y K S+
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F M E++ V +NA++ GY+ +G A++ F +M + P+ T VL+A
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFR--PSEFTFAAVLTA 249
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ +E G ++ +S +K ++D + + A ++ EMP IS
Sbjct: 250 GIQMDDIEFGQQV-HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGIS 308
Query: 385 VWGALLNACRVYGKPE 400
+ L+ C G+ E
Sbjct: 309 -YNVLITCCAWNGRVE 323
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/581 (40%), Positives = 337/581 (58%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C K+ S + G+ + A A+K G + D FV S MY+ A
Sbjct: 115 VCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQ 174
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD + E + WNA I+ + G ++ F + G D IT + + AC
Sbjct: 175 LLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIG 234
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LG+ + ++ G N ++ L+D Y KC E+G A+ +FDG+ ++ V+W +M+
Sbjct: 235 DAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMIS 294
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q + +F + VEP D + SVLSACA + LE G+ VH+ + +
Sbjct: 295 GYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSL 354
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
I +G+ALVD Y KCG I DA AF MP +N W A+I G A G AL F M
Sbjct: 355 TIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMR 414
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
E P VT + VL ACS + VE+G + F SMT YGIKP AEHY CVVDLLGRAG
Sbjct: 415 KASIE--PTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAG 472
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+D AY+ I+ MP+ P +W ALL++C V+ E+G A + L+P+ SG+++LLSN
Sbjct: 473 LIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSN 532
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A+ G+W+ A ++RKEMKD GI+K GCS I + + F A+D+ H + EI + +
Sbjct: 533 IYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEE 592
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ + +K AGYIP+T +V+E EK V HHSEK+A+AFGL+ + PG IR++KNLR+
Sbjct: 593 MIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRV 652
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHSA K IS + RE++VRD NRFH F DG CSC+DYW
Sbjct: 653 CTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/649 (37%), Positives = 356/649 (54%), Gaps = 72/649 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ F P K+ ++L G+QLHA A SG + D V S MY K DA K+
Sbjct: 102 PDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKL 161
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL--------- 118
FD MP+R++ W+A I+ G + A + F +R G EP+L+++ L
Sbjct: 162 FDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFY 221
Query: 119 ------------------NACSDCSL--------LQLGRQLHGFLVRSGFDGNVSVCNGL 152
+ C L + +G Q+HG++++ G + V + +
Sbjct: 222 DEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAM 281
Query: 153 VDFYGKCNEVGLAKVVFD--------------------GIIDK---------------ND 177
+D YGKC V VFD G++D N
Sbjct: 282 LDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNV 341
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W S++ QN ++ ++F + GVEP I S++ AC I+ L G+ +H
Sbjct: 342 VTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCF 401
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+++ + +++VGSAL+DMY KCG IQ A F+KM NLV WNA++ GYA G A
Sbjct: 402 SLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKET 461
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F M ++ P+ VT CVLSAC++ G E+G + + SM+ ++GI+P EHYAC+
Sbjct: 462 MEMFHMM--LQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACL 519
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
V LL R G ++ AY IIKEMP P VWGALL++CRV+ LG IAA+ LF L+P +
Sbjct: 520 VTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNP 579
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN++LLSN++A+ G W+E + +R+ MK G++K G SWI V +++H+ A D SH +
Sbjct: 580 GNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMK 639
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L KL +MK +GY+P TNF L DVEE++K + HSEK+A+ GL+ PG P+
Sbjct: 640 DILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPL 699
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++ KNLRIC DCH+ K IS + GRE+ VRD NRFH F DG CSC D+W
Sbjct: 700 QVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 164/397 (41%), Gaps = 44/397 (11%)
Query: 15 CLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT---GLKDDADKMFDEM 71
CL ++++L +Q HAL L+ D + S Y+ + + +
Sbjct: 8 CLSSSTASLS---QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P L ++++ I + + F +L PD + + +C+ L G+
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH F SGF + V + L Y KC+ + A+ +FD + D++ V W +M+ Y +
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 192 EEENGCQMFLTARREGVEPK-----------------------------------DFMIS 216
E ++F R GVEP +S
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
VL A + + +G VH +K + + FV SA++DMYGKCG +++ F+++ E
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+ NA + G + G D AL F + + E N VT ++++CS+ G + ++
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMEL--NVVTWTSIIASCSQNGKDLEALE 362
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+F M YG++P A ++ G + EI
Sbjct: 363 LFRDMQ-AYGVEPNAVTIPSLIPACGNISALMHGKEI 398
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN T P L A + + GK++H +L+ G DV+VG + DMY+K G
Sbjct: 367 MQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGR 426
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + FD+M NL +WNA + + G+ K ++ F + ++G +PDL+TF L+A
Sbjct: 427 IQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSA 486
Query: 121 CSDCSLLQLG 130
C+ L + G
Sbjct: 487 CAQNGLTEEG 496
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/557 (40%), Positives = 343/557 (61%), Gaps = 3/557 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+ +HA S VF+ S +Y K G DA ++FD MP R++ +W + I+
Sbjct: 83 ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P A+ + R +P+ TF + L A + +G Q+H V+ + +V V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y +C + +A VFD + KN VSW +++ + + + E MF +R G
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E F SSV SA A I LE G+ VHA +K+ + FVG+ ++DMY K GS+ DA
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ ++++V WN+++ +A G A++ FEEM +C N +T + +L+ACS
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR--KCGVHLNQITFLSILTACSHG 380
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G K ++ M +Y ++P +HY VVDLLGRAGL++ A I +MPM+PT +VWGA
Sbjct: 381 GLVKEG-KQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGA 439
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL +CR++ ++G+ AAD++F+LDP+D+G VLL N++A+TG+W+ A VRK MK G+
Sbjct: 440 LLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGV 499
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D +H R+ EI ++ +++ AGY+P+T++ L V+E
Sbjct: 500 KKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDE 559
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+E+ ++ +HSEKIALAF LI +P G IRI KN+RICGDCHSAF++IS + RE++VRD
Sbjct: 560 QERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRD 619
Query: 569 NNRFHRFWDGYCSCSDY 585
NRFH F G CSC DY
Sbjct: 620 TNRFHHFSSGSCSCGDY 636
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 10/327 (3%)
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
+ A G ++ +D+ ++ R P L + + + AC+ L R +H L S F
Sbjct: 39 VPAAASTGIIRDTLDS-VDARELAATPRL--YHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G+V + N L+ Y KC V A+ VFDG+ ++ SW S++ Y QN + +
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R +P F +S+L A A +G +HA+ VK +++VGSAL+DMY +CG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F+++ +N V WNA+I G+A +G + L F EM EA + T V
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEA--THFTYSSVF 273
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SA + GA+E+G K ++ +K G + A ++D+ ++G + A ++ + +
Sbjct: 274 SAIAGIGALEQG-KWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 383 ISVWGALLNACRVYGKPELGRIAADNL 409
++ W ++L A YG LGR A +
Sbjct: 333 VT-WNSMLTAFAQYG---LGREAVTHF 355
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 1/287 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF L KA+ A G+Q+HAL +K DV+VG + DMY++ G
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA I+ G + + F ++R G E T+ + +A
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +++SG + V N ++D Y K + A+ VFD + K+ V+W
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML + Q F R+ GV S+L+AC+ ++ G+ + +
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIG 286
+E I +VD+ G+ G + DA + KMP + W A++G
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/584 (40%), Positives = 348/584 (59%), Gaps = 8/584 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---A 64
P+ FT + A + + + + G+QLH+ A++ G D VGC +MY+K + A
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328
Query: 65 DKMFDEMPERNLATWNAYISNAVL-GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+FD++ + N+ +W A I+ V GG + A+D F + T P+ TF + L AC++
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L++G Q+ V+ GF V N L+ Y + + A+ FD + +KN +S+ ++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N E ++F +G+ F +S+LS A I + G +HA +K+ +
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N V +AL+ MY +CG+I+ A F M +RN++ W +II G+A G A AL F +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 304 MTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M E V PN VT + VLSACS G V +G K F SM ++G+ P EHYAC+VD+LG
Sbjct: 569 MLE---EGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILG 625
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R+G + A + I MP + VW L ACRV+G ELG+ AA + + +P+D ++L
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYIL 685
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A+T +W+E +RK MK+ + K AGCSW+ V+N++H F DTSH + EI
Sbjct: 686 LSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDE 745
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L L ++K GY+P+ +F L+DVEEE+K + HSEKIA+AFGLI+ PIR+ KN
Sbjct: 746 LQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKN 805
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LRICGDCHSA K+IS GRE+IVRD NRFH DG CSC++YW
Sbjct: 806 LRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 200/397 (50%), Gaps = 12/397 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PN++ F +A S G + +K+G + DV VGC DM+ K G A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F++MPERN TW I+ + G AID F+ + +G EPD T ++AC++
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG---LAKVVFDGIIDKNDVSWCS 182
LL LG+QLH +R G + V L++ Y KC+ G A+ +FD I+D N SW +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 183 MLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ YVQ Y+EE +F V P F SS L ACA +A L +G V AVK
Sbjct: 346 MITGYVQKGGYDEE-ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V ++L+ MY + G I DA AF+ + E+NL+ +N +I YA +++ AL
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F E+ A + T +LS + G + KG +I ++ +K G+K ++ +
Sbjct: 465 FNEIEDQGMGA--SAFTFASLLSGAASIGTIGKGEQI-HARVIKSGLKLNQSVCNALISM 521
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
R G ++ A+++ ++M R IS W +++ +G
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVIS-WTSIITGFAKHG 557
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 180/366 (49%), Gaps = 29/366 (7%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYIS--- 84
G +H +S D S +YSK G + A +F M R+L +W+A +S
Sbjct: 85 GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFA 144
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF-D 143
N +G R A+ F+++ G P+ F A ACS + +G + GF+V++G+
Sbjct: 145 NNNMGFR---ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ 201
Query: 144 GNVSVCNGLVDFY--GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+V V GL+D + G+ + V K VF+ + ++N V+W M+ +Q +FL
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFK-VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC- 260
G EP F +S V+SACA + L LG+ +H+ A++ + + VG L++MY KC
Sbjct: 261 EMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCS 320
Query: 261 --GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD-MALSSFEEMTSMRCEAVPNYVT 317
GS+ A F+++ + N+ W A+I GY +G D AL F M + +PN+ T
Sbjct: 321 VDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM--ILTHVIPNHFT 378
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVD---RA 370
L AC+ A+ G ++F + +K G CV + + R+G +D +A
Sbjct: 379 FSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 371 YEIIKE 376
++I+ E
Sbjct: 434 FDILFE 439
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 5/336 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTF KA + L G+Q+ A+K G V S MY+++G DDA
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++N I + A++ F + G TF + L+ +
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+H +++SG N SVCN L+ Y +C + A VF+ + D+N +SW S++
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ ++F EGV P +VLSAC+ + + G + ++ + V
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ GS+ +A N MP + + + W +G G+ ++ + +
Sbjct: 612 PRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 304 MTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ Y+ L + ++ S+ + K MK
Sbjct: 672 IIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMK 707
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 6/261 (2%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR AI ++ G PDL T+ FL C +G +H L +S +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC + A +F + D +SW +M+ + N F+ G
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKC-GSIQDA 266
P ++ ++ AC+ + +G S+ VK ++ ++ VG L+DM+ K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F KMPERN V W +I G+A A+ F EM E P+ TL V+SAC+
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYE--PDRFTLSGVISACA 282
Query: 327 RAGAVEKGMKIFYSMTLKYGI 347
+ G ++ +S +++G+
Sbjct: 283 NMELLLLGQQL-HSQAIRHGL 302
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/587 (40%), Positives = 339/587 (57%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P++ TF + GKQ+H +SG DV +G + +MY + G
Sbjct: 523 MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F + R++ +W A I G AI+ F ++ G P TF + L
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+++ +++ SG++ + V N L+ Y K + A+ VFD + ++ VSW
Sbjct: 643 CTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSW 702
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y QN + + + + V P F S+L+AC+ + LE G+ VHA VK
Sbjct: 703 NKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK 762
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++G++ VG+AL+ MY KCGS +A+ F+ + E+N+V WNA+I YA G A AL
Sbjct: 763 RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGF 822
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + P+ T +LSAC+ AG V +G +IF SM +YG+ P EHY C+V
Sbjct: 823 F---NCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRA A +I +MP P +VW LL ACR++G L AA+N KL+ +
Sbjct: 880 LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN++AA GRW++ +R+ M+ GI+K G SWI V N IH F A D SH EI
Sbjct: 940 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L +L EM+ AGY PDT L+D+ + + T + HSE++A+A+GLI PPG PIRI
Sbjct: 1000 YAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRI 1059
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+A KFIS +VGRE+I RD+NRFH F +G CSC DYW
Sbjct: 1060 FKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 215/417 (51%), Gaps = 9/417 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++ N T+ + A S GK +H+ + G DV +G + MY++ G
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F MP+R+L +WNA I+ A+ + ++ G +P +TF L+A
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S G+ +H ++RSG N + N L++ Y +C + A+ VF+G ++ +SW
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ + Q+ E ++F + E +EP + +SVLS C LELG+ +H +
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ ++ +G+AL++MY +CGS+QDA F+ + R+++ W A+IGG A QG A+
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVD 359
F +M + V + T +L C+ + +++G K+ Y + Y + G + ++
Sbjct: 621 FWQMQNEGFRPVKS--TFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALIS 676
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
++G + A E+ +MP R +S W ++ Y + LG+ A + +++ D
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVS-WNKIIAG---YAQNGLGQTAVEFAYQMQEQD 729
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 198/380 (52%), Gaps = 6/380 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L + + + K++HA +++ D+F+ +MY K DA ++F EM
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R++ +WN+ IS G K A F ++ G P+ IT+ + L AC + L+ G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++++G+ + V N L+ YGKC ++ A+ VF GI ++ VS+ +ML +Y Q
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ +F EG+ P ++L A + L+ G+ +H + V+ + +I VG+
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALV M +CG + A+ AF +R++V +NA+I A GH + +FE+ MR +
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGH---NVEAFEQYYRMRSDG 325
Query: 312 VP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
V N T + +L+ACS + A+E G K+ +S + G + ++ + R G + +A
Sbjct: 326 VALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384
Query: 371 YEIIKEMPMRPTISVWGALL 390
E+ MP R IS W A++
Sbjct: 385 RELFYTMPKRDLIS-WNAII 403
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 197/398 (49%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ T+ L A + + GK++H L ++ G D+ VG + M + G
Sbjct: 220 MSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGD 279
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + F +R++ +NA I+ G A + + +R G + T+ + LNA
Sbjct: 280 VDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+ +H + G +V + N L+ Y +C ++ A+ +F + ++ +SW
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y + + +++ + EGV+P +LSACA + G+ +H ++
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ N + +AL++MY +CGS+ +A+ F R+++ WN++I G+A G + A
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + E P+ +T VLS C A+E G +I +T + G++ ++++
Sbjct: 520 FQEMQNEELE--PDNITFASVLSGCKNPEALELGKQIHGRIT-ESGLQLDVNLGNALINM 576
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
R G + A + + R +S W A++ C G+
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMS-WTAMIGGCADQGE 613
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 6/394 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN T+ + A + GK++H+ +K+G D V S MY K G A ++
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + R++ ++N + K + F + G PD +T+ L+A + S+L
Sbjct: 186 FAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+++H V G + ++ V LV +C +V AK F G D++ V + +++
Sbjct: 246 DEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAAL 305
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ + + R +GV S+L+AC+ LE G+ +H+ + ++
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+AL+ MY +CG + A F MP+R+L+ WNAII GYA + A+ +++M S
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS- 424
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E V P VT + +LSAC+ + A G K+ + L+ GIK ++++ R G
Sbjct: 425 --EGVKPGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGS 481
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ A + + R IS W +++ +G E
Sbjct: 482 LMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYE 514
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 147/291 (50%), Gaps = 6/291 (2%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
E + T+ A L C+ LL +++H +V + ++ + N L++ Y KC V A
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF + ++ +SW S++ Y Q ++ Q+F + G P S+L+AC A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G+ +H+ +KA + + V ++L+ MYGKCG + A F + R++V +N ++G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 288 YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
YA + + L F +M+S E + P+ VT + +L A + +++G +I + +T++ G
Sbjct: 204 YAQKAYVKECLGLFGQMSS---EGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVEEG 259
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ +V + R G VD A + K R + V+ AL+ A +G
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVV-VYNALIAALAQHG 309
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 336/533 (63%), Gaps = 3/533 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF-INLRRTGGEPDLIT 113
Y+K G + A K+FDEMP+R+ +WNA IS V +P+ A++ F + R + T
Sbjct: 163 YAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFT 222
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L A + L+LG+++HG+L+R+ + + V + L+D YGKC + A+ +FD +
Sbjct: 223 LSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK 282
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
D++ VSW +M+ ++ E G +F + GV P ++ + VL+ACA A LG+
Sbjct: 283 DRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKE 342
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + A + F SALV MY KCG+ + A FN+M + +LV W ++I GYA G
Sbjct: 343 VHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQ 402
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D AL FE + ++ P+ VT V VLSAC+ AG V+KG++ F+S+ K+G+ A+H
Sbjct: 403 PDEALHFFELL--LQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 460
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YACV+DLL R+G A II MP++P +W +LL CR++G EL + AA L++++
Sbjct: 461 YACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIE 520
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + ++ L+N++A G W E VRK+M ++GI K G SWI +K ++H+F DTSH
Sbjct: 521 PENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSH 580
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ ++I L +L +++K GY+PDTNF L+DVEEE+K + +HSEK+A+ FG+I+ PP
Sbjct: 581 PKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPP 640
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PI++ KNLR C DCH+A K+IS IV R++ VRD+NRFH F DG CSC DYW
Sbjct: 641 GTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 162/339 (47%), Gaps = 5/339 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R E S N FT AS+A+ GK++H +++ D V + D+Y K G
Sbjct: 212 RHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSL 271
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D+A +FD+M +R++ +W I GR + F +L ++G P+ TF LNAC
Sbjct: 272 DEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC 331
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+D + LG+++HG+++ +G+D + LV Y KC +A+ VF+ + + VSW
Sbjct: 332 ADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWT 391
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVK 240
S++V Y QN + + F + G +P VLSAC ++ G H++ K
Sbjct: 392 SLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS 299
+ + ++D+ + G ++AE + MP + + W +++GG G+ ++A
Sbjct: 452 HGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKR 511
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSAC---SRAGAVEKGM 335
+ + + + E Y+TL + + S V K M
Sbjct: 512 AAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDM 550
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 152/342 (44%), Gaps = 39/342 (11%)
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
R K A++ L RT P + + AC L+LGR++H S F V + N
Sbjct: 70 RVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 151 GLVDFYGKCNE-----------------------VGLAKV--------VFDGIIDKNDVS 179
L+D Y KC VG AK+ +FD + +++ S
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186
Query: 180 WCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W + + YV + + ++F + R E F +SS L+A A I L LG+ +H
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ + + V SAL+D+YGKCGS+ +A F++M +R++V W +I G +
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F ++ M+ PN T VL+AC+ A G ++ + + G PG+ + +V
Sbjct: 307 LLFRDL--MQSGVRPNEYTFAGVLNACADHAAEHLGKEV-HGYMMHAGYDPGSFAISALV 363
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G A + EM +P + W +L+ G+P+
Sbjct: 364 HMYSKCGNTRVARRVFNEM-HQPDLVSWTSLIVGYAQNGQPD 404
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 44/249 (17%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
R P + S++++AC R LELGR VHA + +F+ + L+DMY KCGS+
Sbjct: 80 RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLV 139
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR----CEAVPNYVT--- 317
DA++ F++M R+L WN +I GYA G + A F+EM A+ YVT
Sbjct: 140 DAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQ 199
Query: 318 ------LVCVLS----------------------ACSRAGAVEKGMKIFYSMTLKYGIKP 349
L V+ C R G G I + L +
Sbjct: 200 PREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV-- 257
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
++ ++DL G+ G +D A I +M R +S W +++ C G+ E G + +L
Sbjct: 258 ----WSALLDLYGKCGSLDEARGIFDQMKDRDVVS-WTTMIHRCFEDGRREEGFLLFRDL 312
Query: 410 FK--LDPND 416
+ + PN+
Sbjct: 313 MQSGVRPNE 321
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/595 (40%), Positives = 334/595 (56%), Gaps = 22/595 (3%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT------------- 58
+ P K+ + L + LHALA++SG D F + ++ K
Sbjct: 51 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110
Query: 59 ---GLKDDA----DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
GL+ A K+FDEM ER+ +WN I R + A+ + R G PD
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
T L ++C+ ++ G +HG+ +++GFD +V V + L+D Y C ++ + VFD
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
D + V W SML Y QN E +F + GV P SS++ A ++ L LG
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +HA ++A NIF+ S+L+DMY KCG++ A FN + ++V W A+I GYA
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 350
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A FE M + PN++T + VL+ACS AG V+ G K F SM+ +YG P
Sbjct: 351 GPTTEAFVLFERMELGNVK--PNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSL 408
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EH A + D LGRAG +D AY I EM ++PT SVW LL ACRV+ L A +F+
Sbjct: 409 EHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE 468
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L+P G+HV+LSNM++A+GRW EA +RK M+ G+KK CSWI VKN++H+F A D
Sbjct: 469 LEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDK 528
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH I L E+M GY+P+ L D+EEE+K + HSEK+A+ FG+I+
Sbjct: 529 SHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIIST 588
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PPG IR+ KNLR+C DCH A KFIS IV RE++VRD NRFHRF DG CSC D+W
Sbjct: 589 PPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P TF L A L + GKQLHA +++ ++F+ S DMY K G
Sbjct: 262 MLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGN 321
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F+ + ++ +W A I L G A F + +P+ ITF A L A
Sbjct: 322 VDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTA 381
Query: 121 CSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L+ G + + + GF ++ C L D G+ ++ A + + I
Sbjct: 382 CSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSS 441
Query: 179 SWCSML 184
W ++L
Sbjct: 442 VWSTLL 447
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/586 (40%), Positives = 341/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + P+ T+ + A +L GKQ+HA ++S DV V + MY K G
Sbjct: 237 MLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGA 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ +P R++ WN I V G+ + A F + + PD +T+ A L+A
Sbjct: 297 VKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSA 356
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+++H V+ G +V N L++ Y K + A+ VFD + ++ VSW
Sbjct: 357 CARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSW 416
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y + F ++GVE VL AC+ L+ G+ +HA VK
Sbjct: 417 TALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVK 476
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ V +AL+ MY KCGS++DA M R++V WN +IGG A G AL
Sbjct: 477 AGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQK 536
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M S E PN T V V+SAC VE+G + F SM YGI P +HYAC+VD+
Sbjct: 537 FEVMKSE--EMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDI 594
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAG + A ++I MP +P+ ++WGALL ACR +G E+G AA+ KL+P ++G +
Sbjct: 595 LARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTY 654
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LS ++AA G W + +RK MK+ G+KK G SWI V +H F A D SH R EI
Sbjct: 655 VSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIY 714
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ L L +++K+ GY+PDT F ++D+++E K V HHSEK+A+A+GLI+ PP PIR++
Sbjct: 715 SELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVS 774
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS I GRE+I RD +RFH F +G CSC DYW
Sbjct: 775 KNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 195/362 (53%), Gaps = 4/362 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+H L+ G +V++ + +Y G ++A ++FD+ +++ +WN IS
Sbjct: 63 GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAH 122
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A + F +++ G EPD TF + L+ACS + L GR++H ++ +G N +V
Sbjct: 123 RGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATV 182
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC V A+ VFD + +++VSW ++ Y ++ + + + +EGV
Sbjct: 183 GNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGV 242
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +VLSAC +A LE G+ +HA V++ ++ V +AL MY KCG+++DA
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDARE 302
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F +P R+++ WN +IGG G + A F M C A P+ VT + +LSAC+R
Sbjct: 303 VFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK-ECVA-PDRVTYLAILSACARP 360
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + G +I ++ +K G+ ++++ +AG + A ++ MP R +S W A
Sbjct: 361 GGLACGKEI-HARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS-WTA 418
Query: 389 LL 390
L+
Sbjct: 419 LV 420
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 218/437 (49%), Gaps = 37/437 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + P+ FTF + A S+ G+++H +++G ++ VG + MY+K G
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS 195
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R+ +W G + ++ + + + G P IT+ L+A
Sbjct: 196 VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSA 255
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + L+ G+Q+H +V S +V V L Y KC V A+ VF+ + +++ ++W
Sbjct: 256 CGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAW 315
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ V + + E MF +E V P ++LSACAR GL G+ +HA AVK
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVK 375
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ G+AL++MY K GS++DA F++MP+R++V W A++GGYA G + S+
Sbjct: 376 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFST 435
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M EA N +T +CVL ACS A++ G +I ++ +K GI ++ +
Sbjct: 436 FKKMLQQGVEA--NKITYMCVLKACSNPVALKWGKEI-HAEVVKAGIFADLAVANALMSM 492
Query: 361 LGRAGLVDRA----------------------------------YEIIKEMPMRPTISVW 386
+ G V+ A +E++K MRP + +
Sbjct: 493 YFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTF 552
Query: 387 GALLNACRVYGKPELGR 403
+++ACRV E GR
Sbjct: 553 VNVMSACRVRNLVEEGR 569
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 18/311 (5%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D L + G + D + L +C L +G+Q+H ++R G NV + N L+ Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
C V A+ +FD +K+ VSW M+ Y + +F ++EG+EP F
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
S+LSAC+ A L GR VH ++A + N VG+AL+ MY KCGS++DA F+ M R
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGM 335
+ V W + G YA G+A +L ++ M E V P+ +T + VLSAC A+EKG
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQ---EGVRPSRITYMNVLSACGSLAALEKGK 266
Query: 336 KIFYSMTLKYGIKPGAEHYA------CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+I + +EH++ + + + G V A E+ + +P R I+ W +
Sbjct: 267 QIHAQIV-------ESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIA-WNTM 318
Query: 390 LNACRVYGKPE 400
+ G+ E
Sbjct: 319 IGGLVDSGQLE 329
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/558 (40%), Positives = 340/558 (60%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+++HA S D F+ S MY K DA +FD+M +++ +W + I+
Sbjct: 70 ARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQ 129
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P AI + + +P+ TF + L A + GRQ+H V+ G+ +V V
Sbjct: 130 NDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYV 189
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y +C ++ +A VFD + KN VSW +++ + + + E+ F R G
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGF 249
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E F SSV S+ AR+ LE G+ VHA +K+ + FVG+ L+DMY K GS+ DA
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARK 309
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ ++LV WN+++ +A G A+S FEEM + N +T +C+L+ACS
Sbjct: 310 VFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR--KSGVYLNQITFLCILTACSHG 367
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G K ++ M +Y ++P +HY VV LLGRAGL++ A I +MPM PT +VWGA
Sbjct: 368 GLVKEG-KRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGA 426
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACR++ ++G+ AAD++F+LDP+DSG VLL N++A+TG+W+ A VR MK G+
Sbjct: 427 LLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGV 486
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D +H + EI M ++ ++++ GY+PD ++ L V++
Sbjct: 487 KKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDD 546
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+EK + +HSEK+ALAF LI +P G IRI KN+RICGDCHSAFK+IS + GRE++VRD
Sbjct: 547 QEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRD 606
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F G CSC DYW
Sbjct: 607 TNRFHHFSSGSCSCGDYW 624
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 4/289 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P + +F+ AC+ L+ R++H L S F G+ + N L+ Y KC V A+ V
Sbjct: 49 PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
FD + K+ VSW S++ Y QN + + +P F +S+L A A
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
GR +HA+AVK +++VGSAL+DMY +CG + A F+K+ +N V WNA+I G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A +G + AL +F EM EA + T V S+ +R GA+E+G K ++ +K K
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEA--THFTYSSVFSSIARLGALEQG-KWVHAHVIKSRQK 285
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
A ++D+ ++G + A ++ + + ++ W ++L A YG
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVT-WNSMLTAFAQYG 333
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 1/288 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN FTF L KA+ A TG+Q+HALA+K G DV+VG + DMY++ G
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGK 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA IS G ++A+ F + R G E T+ + ++
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +++S V N L+D Y K + A+ VFD + +K+ V+W
Sbjct: 263 IARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML + Q + F R+ GV +L+AC+ ++ G+ + +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+E I +V + G+ G + A + KMP E W A++
Sbjct: 383 YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 14/245 (5%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + S ++ACA+ LE R +HA + G+ F+ ++L+ MY KC S+ DA
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M +++V W ++I GYA A+ M R + PN T +L A
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFK--PNGFTFASLLKAAGA 164
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +I +++ +K G + ++D+ R G +D A + ++ + +S W
Sbjct: 165 YADSGTGRQI-HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA--------TGRWEEADLV 439
AL++ G E + + + H S++F++ G+W A ++
Sbjct: 223 ALISGFARKGDGESALMTFAEMLR--NGFEATHFTYSSVFSSIARLGALEQGKWVHAHVI 280
Query: 440 RKEMK 444
+ K
Sbjct: 281 KSRQK 285
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/579 (40%), Positives = 344/579 (59%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + A + +++HA A++ G V V + D+Y K G D A K+
Sbjct: 325 PDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKV 384
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M +RN +WNA I G A+ F + G + ++ A L+AC + L
Sbjct: 385 FDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFL 444
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
GR++H LVR G + NV+V N L+ Y KC LA VFD + K VSW +M++
Sbjct: 445 DEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGC 504
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN E+ ++F + E V+P F + S++ A A I+ R +H +++ ++ ++
Sbjct: 505 TQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDV 564
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+V +AL+DMY KCG + A FN +R+++ WNA+I GY G +A+ FEEM S
Sbjct: 565 YVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKS- 623
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
VPN T + VLSACS AG V++G + F SM YG++PG EHY +VDLLGRAG +
Sbjct: 624 -SGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKL 682
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
A+ I++MPM P ISV+GA+L AC+++ EL +A +F+L+P + HVLL+N++
Sbjct: 683 HEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIY 742
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A W++ VR M+ G++K G S + +KN IH F + T+H++ +I A L KL
Sbjct: 743 ANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLI 802
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EE+KA GY+PDT+ +++DVE++ K + HSEK+A+A+GLI PG I+I KNLR+C
Sbjct: 803 EEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCK 861
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A K IS + GRE+I+RD RFH F DG CSC DYW
Sbjct: 862 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 194/398 (48%), Gaps = 10/398 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF L K +A TG+ +HA G + + +MY+K DA ++FD M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLG 130
P R+ WNA ++ G + A+ + ++ GE PD +T + L AC+D L
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R++H F VR GFD V+V ++D Y KC V A+ VFDG+ D+N VSW +M+ Y +N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F EGV+ D + + L AC + L+ GR VH + V+ +E N+ V
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+AL+ MY KC A F+++ + V WNA+I G G ++ A+ F + M+ E
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLF---SRMQLE 523
Query: 311 AV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
V P+ TLV ++ A + + + + +++ + ++D+ + G V
Sbjct: 524 NVKPDSFTLVSIIPALADISDPLQA-RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSI 582
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
A + R I+ W A+++ YG G++A +
Sbjct: 583 ARSLFNSARDRHVIT-WNAMIHG---YGSHGSGKVAVE 616
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 157/331 (47%), Gaps = 10/331 (3%)
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLG 130
P+ + A A S + L G A+ AF + G P L TF + L C+ + L G
Sbjct: 189 PDDHHARLRAAASRSDLRG----ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATG 244
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R +H L G L + Y KC G A+ VFD + ++ V+W +++ Y +N
Sbjct: 245 RAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARN 304
Query: 191 YEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
E M + + E G P + SVL ACA L R VHA AV+ + + V
Sbjct: 305 GLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNV 364
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+A++D+Y KCG++ A F+ M +RN V WNA+I GYA G A AL+ F+ M
Sbjct: 365 STAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGV 424
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ V+++ L AC G +++G ++ + + ++ G++ ++ + + D
Sbjct: 425 DVTD--VSVLAALHACGELGFLDEGRRV-HELLVRIGLESNVNVMNALITMYCKCKRTDL 481
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
A ++ E+ + +S W A++ C G E
Sbjct: 482 AAQVFDELGYKTRVS-WNAMILGCTQNGSSE 511
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P+ FT + A + + P+ + +H +++ DV+V + DMY+K G
Sbjct: 520 MQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 579
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F+ +R++ TWNA I G K A++ F ++ +G P+ TF + L+A
Sbjct: 580 VSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSA 639
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV 162
CS L+ G++ + G + + +VD G+ ++
Sbjct: 640 CSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKL 682
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/586 (39%), Positives = 342/586 (58%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ T + A SAL + GK++H A+++G V + + DMY+K G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGS 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M ERN+ +WN+ I V PK A+ F + G +P ++ L+A
Sbjct: 287 LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHA 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+ GR +H V D NVSV N L+ Y KC EV A +F + + VSW
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ + QN F + V+P F SV++A A ++ + +H V ++
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
C++ N+FV +ALVDMY KCG+I A + F+ M ER++ WNA+I GY G AL
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + PN VT + V+SACS +G VE G+K F+ M Y I+P +HY +VDL
Sbjct: 527 FEEMQ--KGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDL 584
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A++ I +MP++P ++V+GA+L AC+++ A+ LF+L+P D G H
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYH 644
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++ A WE+ VR M G++K GCS + +KN +H F + T+H + +I
Sbjct: 645 VLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIY 704
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L KL ++K AGY+PDTN L +E++ K + HSEK+A++FGL+ G I +
Sbjct: 705 AFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVR 763
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K+IS + GRE+IVRD RFH F +G CSC DYW
Sbjct: 764 KNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 215/411 (52%), Gaps = 8/411 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P + F L K GK++H L +KSG D+F +MY+K
Sbjct: 126 MRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K+FD MPER+L +WN ++ G + A++ + +P IT + L A
Sbjct: 186 VHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPA 245
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S L+++G+++HG+ +R+GFD V++ LVD Y KC + A+++FDG++++N VSW
Sbjct: 246 VSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSW 305
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQN + +F EGV+P D + L ACA + LE GR +H ++V+
Sbjct: 306 NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N+ V ++L+ MY KC + A F K+ R +V WNA+I G+A G AL+
Sbjct: 366 LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNY 425
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + + P+ T V V++A + ++ K + + ++ + +VD+
Sbjct: 426 FSQMQARTVK--PDTFTYVSVITAIAEL-SITHHAKWIHGVVMRNCLDKNVFVTTALVDM 482
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ G + A I M R ++ W A+++ YG +G+ AA LF+
Sbjct: 483 YAKCGAIMIARLIFDMMSER-HVTTWNAMIDG---YGTHGIGK-AALELFE 528
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 189/382 (49%), Gaps = 10/382 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+ + L K+G + ++ + G D+A ++F+ + ++ + +
Sbjct: 54 RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKV 113
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
A+ F+ +R EP + F L C D + L++G+++HG LV+SGF ++
Sbjct: 114 SDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
GL + Y KC +V A+ VFD + +++ VSW +++ Y QN +M E ++
Sbjct: 174 TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLK 233
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P I SVL A + + + +G+ +H A++A + + + +ALVDMY KCGS++ A +
Sbjct: 234 PSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLL 293
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRA 328
F+ M ERN+V WN++I Y + A+ F++M E V P V+++ L AC+
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD---EGVKPTDVSVMGALHACADL 350
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + + ++++ + ++ + + VD A + ++ R TI W A
Sbjct: 351 GDLERG-RFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-TIVSWNA 408
Query: 389 LLNACRVYGKPELGRIAADNLF 410
++ G+P I A N F
Sbjct: 409 MILGFAQNGRP----IEALNYF 426
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/558 (39%), Positives = 343/558 (61%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+++HA S D F+ S +Y K G +A K+FDEM +++ +W + I+
Sbjct: 70 ARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQ 129
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P+ AI + + +P+ TF + L A + +GRQ+H V+ + +V V
Sbjct: 130 NDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYV 189
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y +C + +A VFD + KN VSW +++ + + + E F R G
Sbjct: 190 GSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGF 249
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E F SSV S+ AR+ LE G+ VHA +K+ + F G+ L+DMY K GS+ DA
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARK 309
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ +++LV WN ++ +A G A+S FEEM + N VT +C+L+ACS
Sbjct: 310 VFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMR--KSGIYLNQVTFLCILTACSHG 367
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G K ++ M +Y ++P +H+ VV LLGRAGL++ A I +MP+ PT +VWGA
Sbjct: 368 GLVKEG-KRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGA 426
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACR++ ++G+ AAD++F+LDP+DSG VLL N++A+TG+W+ A VR+ MK G+
Sbjct: 427 LLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGV 486
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D +H R EI M ++ ++++ GY+PD ++ L V++
Sbjct: 487 KKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDD 546
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+E+ + +HSEK+ALAF LI +P G IRI KN+RICGDCHSAFK+IS + GRE++VRD
Sbjct: 547 QEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRD 606
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F +G CSC+DYW
Sbjct: 607 TNRFHHFSNGSCSCADYW 624
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 4/289 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P + F+ AC+ L+ R++H L S F G+ + N L+ Y KC V A+ V
Sbjct: 49 PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
FD + K+ VSW S++ Y QN E + + +P F +S+L A A
Sbjct: 109 FDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+GR +HA+AVK +++VGSAL+DMY +CG + A F+K+ +N V WNA+I G+
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A +G + AL +F EM EA + T V S+ +R GA+E+G K ++ +K K
Sbjct: 229 ARKGDGETALMTFAEMLRNGFEA--THFTYSSVFSSIARLGALEQG-KWVHAHMIKSRQK 285
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
A ++D+ ++G + A ++ + + ++ W +L A YG
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVT-WNTMLTAFAQYG 333
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN FTF L KA+ A G+Q+HALA+K DV+VG + DMY++ G+
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGM 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA IS G + A+ F + R G E T+ + ++
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +++S N L+D Y K + A+ VFD + DK+ V+W
Sbjct: 263 IARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML + Q + F R+ G+ +L+AC+ ++ G+ + +
Sbjct: 323 NTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+E I +V + G+ G + A + KMP E W A++
Sbjct: 383 YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAA 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 14/245 (5%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + ++ACA+ LE R VHA + G+ F+ ++L+ +Y KCGS+ +A
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M +++V W ++I GYA + A+ M R + PN T +L A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFK--PNGFTFASLLKAAGA 164
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +I +++ +K + ++D+ R G++D A + ++ + +S W
Sbjct: 165 HADSGIGRQI-HALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVS-WN 222
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA--------TGRWEEADLV 439
AL++ G E + + + H S++F++ G+W A ++
Sbjct: 223 ALISGFARKGDGETALMTFAEMLR--NGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI 280
Query: 440 RKEMK 444
+ K
Sbjct: 281 KSRQK 285
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 346/586 (59%), Gaps = 1/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++ N T+ + A S GK +H+ + G DV +G + MY++ G
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F MP+R+L +WNA I+ A+ + ++ G +P +TF L+A
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S G+ +H ++RSG N + N L++ Y +C + A+ VF+G ++ +SW
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ + Q+ E ++F + E +EP + +SVLS C LELG+ +H +
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ ++ +G+AL++MY +CGS+QDA F+ + R+++ W A+IGG A QG A+
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ T +LSAC+ AG V +G +IF SM +YG+ P EHY C+V L
Sbjct: 621 FWQMQNEGFRP-PDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGL 679
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA A +I +MP P +VW LL ACR++G L AA+N KL+ + +
Sbjct: 680 LGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVY 739
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++AA GRW++ +R+ M+ GI+K G SWI V N IH F A D SH EI
Sbjct: 740 ILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIY 799
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L +L EM+ AGY PDT L+D+ + + T + HSE++A+A+GLI PPG PIRI
Sbjct: 800 AELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIF 859
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+A KFIS +VGRE+I RD+NRFH F +G CSC DYW
Sbjct: 860 KNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 200/380 (52%), Gaps = 6/380 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L + + + K++HA +++G D+F+ +MY K DA ++F EM
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R++ +WN+ IS G K A F ++ G P+ IT+ + L AC + L+ G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++++G+ + V N L+ YGKC ++ A+ VF GI ++ VS+ +ML +Y Q
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ +F EG+ P ++L A + L+ G+ +H + V+ + +I VG+
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALV M +CG + A+ AF + +R++V +NA+I A GH + +FE+ MR +
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGH---NVEAFEQYYRMRSDG 325
Query: 312 VP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
V N T + +L+ACS + A+E G K+ +S + G + ++ + R G + +A
Sbjct: 326 VALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384
Query: 371 YEIIKEMPMRPTISVWGALL 390
E+ MP R IS W A++
Sbjct: 385 RELFYTMPKRDLIS-WNAII 403
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 198/398 (49%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ T+ L A + + GK++H L ++ G D+ VG + M + G
Sbjct: 220 MSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGD 279
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + F + +R++ +NA I+ G A + + +R G + T+ + LNA
Sbjct: 280 VDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+ +H + G +V + N L+ Y +C ++ A+ +F + ++ +SW
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y + + +++ + EGV+P +LSACA + G+ +H ++
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ N + +AL++MY +CGS+ +A+ F R+++ WN++I G+A G + A
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + E P+ +T VLS C A+E G +I +T + G++ ++++
Sbjct: 520 FQEMQNEELE--PDNITFASVLSGCKNPEALELGKQIHGRIT-ESGLQLDVNLGNALINM 576
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
R G + A + + R +S W A++ C G+
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMS-WTAMIGGCADQGE 613
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 188/394 (47%), Gaps = 6/394 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN T+ + A + GK++H+ +K+G D V S MY K G A ++
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + R++ ++N + K + F + G PD +T+ L+A + S+L
Sbjct: 186 FAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+++H V G + ++ V LV +C +V AK F GI D++ V + +++
Sbjct: 246 DEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAAL 305
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ + + R +GV S+L+AC+ LE G+ +H+ + ++
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+AL+ MY +CG + A F MP+R+L+ WNAII GYA + A+ +++M S
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS- 424
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E V P VT + +LSAC+ + A G K+ + L+ GIK ++++ R G
Sbjct: 425 --EGVKPGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGS 481
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ A + + R IS W +++ +G E
Sbjct: 482 LMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYE 514
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 6/291 (2%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
E D T+ A L C+ LL +++H +V +G ++ + N L++ Y KC V A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF + ++ +SW S++ Y Q ++ Q+F + G P S+L+AC A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G+ +H+ +KA + + V ++L+ MYGKCG + A F + R++V +N ++G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 288 YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
YA + + L F +M+S E + P+ VT + +L A + +++G +I + +T++ G
Sbjct: 204 YAQKAYVKECLGLFGQMSS---EGISPDKVTYINLLDAFTTPSMLDEGKRI-HKLTVEEG 259
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ +V + R G VD A + K + R + V+ AL+ A +G
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV-VYNALIAALAQHG 309
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 339/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN +T+P + + ++L G+Q+H +KSG +V+V DMY+K G
Sbjct: 406 MQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGE 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + + E ++ +W A I+ A+ F + G D I F + ++A
Sbjct: 466 LDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISA 525
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+Q+H SG+ ++S+ N LV Y +C A + F+ I K+++SW
Sbjct: 526 CAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISW 585
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q+ E Q+F + GVE F S +SA A A ++ G+ +HA+ +K
Sbjct: 586 NALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK 645
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + L+ +Y KCGSI+DA+ F +MPE+N+V WNA+I GY+ G+ A+S
Sbjct: 646 TGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 705
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + +PN+VT V VLSACS G V +G+ F SM+ ++G+ P EHY CVVDL
Sbjct: 706 FEEMKQLGL--MPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDL 763
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA L+ A E I+EMP+ P +W LL+AC V+ E+G AA +L +L+P DS +
Sbjct: 764 LGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATY 823
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+A +G+W+ D R+ MKD G+KK G SWI VKN IH F D H +I
Sbjct: 824 VLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIY 883
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ L E GY+ D L DVE+E+K HSEK+A+AFGL+++ +PIR+
Sbjct: 884 EYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVI 943
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KF+S I R ++VRD RFH F G CSC DYW
Sbjct: 944 KNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 198/397 (49%), Gaps = 4/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +C+ P+ T L A +++ GKQLH+ +K G D+ + S D+Y K
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A + F N+ WN + G + F+ ++ G P+ T+ + L
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L LG Q+H +++SGF NV VC+ L+D Y K E+ A+ + + +++ VSW
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q+ ++F +G+ + SS +SACA I L G+ +HA +
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ +G+ALV +Y +CG QDA +AF K+ ++ + WNA+I G+A GH + AL
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQV 604
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M EA N T +SA + +++G +I ++M +K G E ++ L
Sbjct: 605 FSQMNQAGVEA--NLFTFGSAVSATANTANIKQGKQI-HAMMIKTGYDSETEASNVLITL 661
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G ++ A EMP + +S W A++ +G
Sbjct: 662 YSKCGSIEDAKREFFEMPEKNVVS-WNAMITGYSQHG 697
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 202/406 (49%), Gaps = 10/406 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I N T+ LF+ + K+LHA KSG + +G D+Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A K+FD++P N++ WN IS + + F + PD TF + L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 121 CSDCSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS Q+ Q+H ++ GF + VCN L+D Y K V LAK+VF+ + K+ VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ QN E+ +F + V P ++ SSVLSAC +I +LG +H V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + FV +ALV +Y + G++ AE F+KM R+ + +N++I G A +G +D AL
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M + C P+ VT+ +LSAC+ GA KG K +S +K G+ ++D
Sbjct: 301 LFEKM-QLDCMK-PDCVTVASLLSACASVGAGYKG-KQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
L + ++ A+E + +W +L A YG +LG ++
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVV-LWNVMLVA---YG--QLGNLS 397
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 223/519 (42%), Gaps = 51/519 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P + F + A + + + G+QLH +K G + FV + +YS+ G
Sbjct: 204 MHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGN 263
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +M R+ ++N+ IS G A+ F ++ +PD +T + L+A
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ G+QLH ++++ G ++ + L+D Y KC ++ A F +N V W
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q +FL + EG+ P + S+L C + L+LG +H +K
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + N++V S L+DMY K G + A ++ E ++V W A+I GY AL
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKL 503
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + + + + +SAC+ A+ +G +I ++ + G +V L
Sbjct: 504 FQEMENQGIRS--DNIGFSSAISACAGIQALNQGQQI-HAQSYISGYSEDLSIGNALVSL 560
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
R G AY +++ + IS W AL++
Sbjct: 561 YARCGRAQDAYLAFEKIDAKDNIS-WNALISG---------------------------- 591
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGA---GCSWISVKNRIHIFQAKD------- 470
FA +G EEA V +M G++ G + + N +I Q K
Sbjct: 592 ------FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK 645
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
T ++ TE +L L + G I D +++ E+
Sbjct: 646 TGYDSETEASNVLITLYSK---CGSIEDAKREFFEMPEK 681
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 201/421 (47%), Gaps = 17/421 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E ++P++ TF + +A S P +Q+HA + G V D+YSK G
Sbjct: 102 MITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNG 161
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A +F+ + ++ +W A IS GR AI F + ++ P F + L+
Sbjct: 162 HVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLS 221
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L +LG QLHGF+V+ G VCN LV Y + + A+ +F + ++ +S
Sbjct: 222 ACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS 281
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ Q + Q+F + + ++P ++S+LSACA + G+ +H+ +
Sbjct: 282 YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 341
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + ++ + +L+D+Y KC I+ A F N+V WN ++ Y G+
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS---E 398
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S+ M+ E + PN T +L C+ GA++ G +I ++ +K G + + ++
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI-HTQVIKSGFQFNVYVCSVLI 457
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL----------NACRVYGKPELGRIAADN 408
D+ + G +D A I++ + +S W A++ A +++ + E I +DN
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVS-WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDN 516
Query: 409 L 409
+
Sbjct: 517 I 517
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/584 (41%), Positives = 347/584 (59%), Gaps = 9/584 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT+P + KA L + G+++HAL + G DV+VG S MY K G + A +
Sbjct: 122 PDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVV 181
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M R+L +WN +S V G + A + F ++RR G D T A L+AC D L
Sbjct: 182 FDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDL 241
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNG-----LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
++G+++HG++VR+G G V CNG ++D Y C V A+ +F+G+ K+ VSW S
Sbjct: 242 KVGKEIHGYVVRNGESGRV--CNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNS 299
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ Y + + ++F G P + + SVL+AC +I+ L LG +V + VK
Sbjct: 300 LISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRG 359
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
N+ VG+AL+ MY CGS+ A F++MPE+NL ++ G+ G A+S F
Sbjct: 360 YVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFY 419
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
EM P+ VLSACS +G V++G +IFY MT Y ++P HY+C+VDLLG
Sbjct: 420 EMLGK--GVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLG 477
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RAG +D AY +I+ M ++P VW ALL+ACR++ +L I+A LF+L+P+ +V
Sbjct: 478 RAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVC 537
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++AA RWE+ + VR + ++K S++ + +H F DTSHE++ +I A
Sbjct: 538 LSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAK 597
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L L E++K AGY PDT+ LYDVEEE K + HSE++ALAF LI PG IRITKN
Sbjct: 598 LKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKN 657
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+CGDCH+ K IS + RE+I+RD RFH F DG CSC YW
Sbjct: 658 LRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 174/352 (49%), Gaps = 7/352 (1%)
Query: 31 QLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
QLHA G + + ++ Y+ G A +FD++ +N WN+ I
Sbjct: 43 QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P A+ ++ + G +PD T+ L AC D L ++GR++H +V G + +V V
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ Y K +V A+VVFD ++ ++ SW +M+ +V+N E ++F RR+G
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI---FVGSALVDMYGKCGSIQDA 266
+ ++LSAC + L++G+ +H V+ G + F+ ++++DMY C S+ A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F + +++V WN++I GY G A AL F M + AVP+ VT++ VL+AC+
Sbjct: 283 RKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVV--GAVPDEVTVISVLAACN 340
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ A+ G + S +K G ++ + G + A + EMP
Sbjct: 341 QISALRLGATV-QSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMP 391
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 342/559 (61%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ V++ +Y+K DA ++ DEMPERN+ +W A IS
Sbjct: 29 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F+ + +G P+ TF L +C+ S QLGRQ+H ++++ F+ ++ V
Sbjct: 89 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K ++ A+ VFDG+ +++ VS +++ Y Q +E +F +REG+
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+SVL+A + +A L+ GR VH+ ++A + + + ++L+DMY KCGS+ +
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 268
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER ++ WNA++ GY+ G A+ F+ M + P+ VT + VLS CS
Sbjct: 269 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE-ENKVKPDSVTFLAVLSGCSHG 327
Query: 329 GAVEKGMKIFYSMT-LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G ++G++IFY M K G +P EHY CVVDL GRAG V+ A+E IK+MP PT ++WG
Sbjct: 328 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 387
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV+ +G A L +++ ++GN+V+LSN++A+ GRW++ VR+ MK+
Sbjct: 388 SLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 447
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SWI + +H F A D SH R E+ A + +L ++K AGY+P+ + LYDV+
Sbjct: 448 VIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVD 507
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+E+K + HSEK+ALAFGLI P G P+RI KNLRIC DCH+ KF+S + GREV +R
Sbjct: 508 DEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLR 567
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH G CSC DYW
Sbjct: 568 DKNRFHHIVGGTCSCGDYW 586
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 8/307 (2%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G E + + + L C + ++ G+++H ++++ ++ V + L+ Y KC +G A
Sbjct: 5 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ V D + ++N VSW +M+ Y Q +F+ G P +F ++VL++C
Sbjct: 65 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+G +LGR +H++ +K E +IFVGS+L+DMY K G I +A F+ +PER++V AII
Sbjct: 125 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GYA G + AL F + R NYVT VL+A S A++ G ++ +S L+
Sbjct: 185 SGYAQLGLDEEALDLFRRL--QREGMRSNYVTYASVLTALSGLAALDHGRQV-HSHVLRA 241
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ ++D+ + G + + I MP R IS W A+L Y K LGR A
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAMLVG---YSKHGLGREA 297
Query: 406 ADNLFKL 412
+ LFKL
Sbjct: 298 VE-LFKL 303
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 165/327 (50%), Gaps = 8/327 (2%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+PN+FTF + + ++ G+Q+H+L +K+ +FVG S DMY+K G +A +
Sbjct: 108 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 167
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD +PER++ + A IS G + A+D F L+R G + +T+ + L A S +
Sbjct: 168 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 227
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L GRQ+H ++R+ V + N L+D Y KC + ++ +FD + ++ +SW +MLV
Sbjct: 228 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287
Query: 187 YVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSV--HAVAVKACV 243
Y ++ ++F + E V+P +VLS C+ + G + V K
Sbjct: 288 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 347
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF- 301
E I +VD++G+ G +++A KMP E W +++G A + H ++ + F
Sbjct: 348 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG--ACRVHQNVHIGEFV 405
Query: 302 -EEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + E NYV L + ++ R
Sbjct: 406 ARRLLEIESENAGNYVILSNLYASAGR 432
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+G+E + SVL+ C + G+ VHA +K C E +++ + L+ +Y KC + D
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A ++MPERN+V W A+I GY+ +G+A AL F EM + PN T VL++C
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEM--LMSGTAPNEFTFATVLTSC 121
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ + + G +I +S+ +K + + ++D+ +AG + A + +P R +S
Sbjct: 122 TSSSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++RE + N T+ + A S L G+Q+H+ L++ V + S DMYSK G
Sbjct: 203 LQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 262
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
+ ++FD MPER + +WNA + G + A++ F ++ +PD +TF A L+
Sbjct: 263 LTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLS 322
Query: 120 ACSDCSLLQLGRQLHGFLV--RSGFDGNVSVCNGLVDFYGKCNEV 162
CS + G ++ +V + GF+ + +VD +G+ V
Sbjct: 323 GCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 367
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 333/543 (61%), Gaps = 3/543 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D F+ S +Y K G +A K+FD+M ++++ +W + I+ P AI +
Sbjct: 85 DAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGML 144
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ +P+ TF + L A + +G Q+H V+ + +V V + L+D Y +C ++
Sbjct: 145 KGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMD 204
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
+A VFD + KN VSW +++ + + + E +F +R G E F SS+ S A
Sbjct: 205 MATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLA 264
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
I LE G+ VHA VK+ + FVG+ ++DMY K GS+ DA F ++ ++LV WN+
Sbjct: 265 GIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNS 324
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
++ +A G A+S FEEM + N +T +C+L+ACS G V++G K ++ M
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMR--KSGIYLNQITFLCILTACSHGGLVKEG-KHYFDMIK 381
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+Y ++P EHY VVDLLGRAGL++ A I +MPM PT +VWGALL ACR++ ++G+
Sbjct: 382 EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQ 441
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AAD++F+LDP+DSG VLL N++A+TG W+ A VRK MK G+KK CSW+ + N +
Sbjct: 442 FAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSV 501
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H+F A D +H R EI M ++ +++ GY+PD ++ L V+E+E+ + +HSEKIA
Sbjct: 502 HMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIA 561
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
LAF LI +P G IRI KN+RICGDCHSAFK+IS + RE++VRD NRFH F +G CSC
Sbjct: 562 LAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCG 621
Query: 584 DYW 586
DYW
Sbjct: 622 DYW 624
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 7/301 (2%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P + AF+ AC+ L R++HG L S F+G+ + N L+ Y KC V A V
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
FD + K+ VSW S++ Y QN + + +P F +S+L A A
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+G +HA+AVK +++VGSAL+DMY +CG + A F+K+ +N V WNA+I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A +G + AL F EM EA + T + S + GA+E+G K ++ +K K
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEAT--HFTYSSIFSGLAGIGALEQG-KWVHAHMVKSRQK 285
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
A ++D+ ++G + A ++ E + + W ++L A YG LG+ A +
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVF-ERVLNKDLVTWNSMLTAFAQYG---LGKEAVSH 341
Query: 409 L 409
Sbjct: 342 F 342
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 1/288 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN FTF L KA+ A G Q+HALA+K DV+VG + DMY++ G
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA IS G + A+ F ++R G E T+ + +
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSG 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +V+S V N ++D Y K + A+ VF+ +++K+ V+W
Sbjct: 263 LAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML + Q + F R+ G+ +L+AC+ ++ G+ + +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+E I +VD+ G+ G + A + KMP E W A++
Sbjct: 383 YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + ++ACA+ L+ R +H + EG+ F+ ++L+ +Y KCGS+ +A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+KM ++++V W ++I GYA A+ M R + PN T +L A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFK--PNGFTFASLLKAAGA 164
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +I +++ +K + ++D+ R G +D A + ++ + +S W
Sbjct: 165 YADSGIGGQI-HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA--------TGRWEEADL 438
AL++ + + G A ++ N H S++F+ G+W A +
Sbjct: 223 ALISG---FARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHM 279
Query: 439 VRKEMK 444
V+ K
Sbjct: 280 VKSRQK 285
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 334/558 (59%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLHA G ++ + +Y+ + +A +FD++P++NL WN I
Sbjct: 66 GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G NAI + + G PD T L ACS S + GR +H ++++SG++ ++ V
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y KC V A VFD I+ ++ V W SML Y QN + + GV
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + + +V+S+ A +A L GR +H + + N V +AL+DMY KCGS++ A
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ E+ +V WNAII GYA G A AL F++M R E P+++T V VL+ACSR
Sbjct: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM---RKEDRPDHITFVGVLAACSRG 362
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+++G ++ M YGI P +HY C++DLLG G +D AY++I+ M ++P VWGA
Sbjct: 363 RLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGA 422
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LLN+C+++G EL +A + L +L+P+DSGN+V+L+NM+A +G+WE + +R+ M D I
Sbjct: 423 LLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRI 482
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSWI VKN+++ F A D SH + I A L +L M AGY PDT +DVEE
Sbjct: 483 KKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEE 542
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+EK + V HSE++A+AFGLI+ PG + ITKNLRIC DCH A KFIS I+ RE+ VRD
Sbjct: 543 DEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRD 602
Query: 569 NNRFHRFWDGYCSCSDYW 586
NR+H F G CSC D+W
Sbjct: 603 VNRYHSFKHGMCSCGDHW 620
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 3/344 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FT P + KA SAL G+ +H +KSG D+FVG + DMY+K G DA
Sbjct: 144 LRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAG 203
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD++ R+ WN+ ++ G P +I + G P T +++ +D +
Sbjct: 204 RVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVA 263
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR++HGF R GF N V L+D Y KC V +A +F+ + +K VSW +++
Sbjct: 264 CLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIIT 323
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VE 244
Y + +F R+E P VL+AC+R L+ GR+++ + V+ +
Sbjct: 324 GYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT 382
Query: 245 GNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + ++D+ G CG + +A ++ N + + W A++ G+ ++A + E+
Sbjct: 383 PTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEK 442
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+ + + NYV L + + + VEK ++ +K I
Sbjct: 443 LIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNI 486
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 11/339 (3%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ + L +C D L G+QLH G N + LV Y N + A+ +FD I
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+N W ++ Y N +N ++ G+ P +F + VL AC+ ++ + GRS
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H +K+ E ++FVG+AL+DMY KCG + DA F+K+ R+ V WN+++ YA GH
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D ++S EM + P TLV V+S+ + + G +I + ++G + +
Sbjct: 230 PDESISLCREMAANGVR--PTEATLVTVISSSADVACLPYGREI-HGFGWRHGFQSNDKV 286
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
++D+ + G V A + + + + +S W A++ ++G L A D K+
Sbjct: 287 KTALIDMYAKCGSVKVALALFERLREKRVVS-WNAIITGYAMHG---LAVGALDLFDKMR 342
Query: 414 PNDSGNHVLLSNMFAATGRWEEAD----LVRKEMKDVGI 448
D +H+ + AA R D L ++D GI
Sbjct: 343 KEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGI 381
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/622 (38%), Positives = 351/622 (56%), Gaps = 38/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + ISPN TF L + + G+++H+ + G D+ V + MY K
Sbjct: 249 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS 308
Query: 61 KDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINL----RRTGGEPDLITFC 115
+A ++FD M +R++ +W+A I+ A G + K +ID L RR G P+ +TF
Sbjct: 309 VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L AC+ L+ GRQ+H L + GF+ + S+ + + Y KC + A+ VF + +K
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428
Query: 176 NDVSWCSMLVVYV-------------------------------QNYEEENGCQMFLTAR 204
N V+W S L +Y+ QN + ++ + +
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EG +P + ++L AC +AGLE G+ VHA AVK +E + V ++L+ MY KCG +
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A F+KM R+ V WNA++ GY G A+ F+ M R PN +TL V+SA
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVS--PNEITLTAVISA 606
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CSRAG V++G +IF M + + P +HY C+VDLLGRAG + A E I+ MP P IS
Sbjct: 607 CSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDIS 666
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VW ALL AC+ + +L AA ++ +L+P+ + ++ LSN++A GRW+++ VR+ M
Sbjct: 667 VWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMD 726
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK G S I + RIH F A+D +H I A L L +EMK AGY PD F L+
Sbjct: 727 DRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLH 786
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DV++ +K + HHSEK+A+A+GL+ P G PIRI KNLR+CGDCH+A KFIS I RE+
Sbjct: 787 DVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREI 846
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+ RD NRFH F +G CSC D+W
Sbjct: 847 VARDANRFHYFNNGTCSCGDFW 868
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 223/466 (47%), Gaps = 48/466 (10%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN TF + KA + I G+++H + G DV V + MYSK G A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +M ERN+ +W A I + A + + + + G P+ +TF + LN+C+
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR++H + G + ++ V N L+ Y KCN V A+ +FD + ++ +SW +M+
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 186 VYVQN-YEEENGC----QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
Y Q+ Y+++ Q+ RREGV P S+L AC LE GR +HA K
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK---------------------------- 272
E + + +A+ +MY KCGSI +AE F+K
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452
Query: 273 ---MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRA 328
MP RN+V WN +I GYA G + FE ++SM+ E P+ VT++ +L AC
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGD---IVKVFELLSSMKAEGFQPDRVTVITILEACGAL 509
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+E+G K+ ++ +K G++ ++ + + G V A + +M R T++ W A
Sbjct: 510 AGLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNA 567
Query: 389 LLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGR 432
+L YG+ G A D LFK L S N + L+ + +A R
Sbjct: 568 MLAG---YGQHGDGLEAVD-LFKRMLKERVSPNEITLTAVISACSR 609
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 201/386 (52%), Gaps = 5/386 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N T+ C+ + + GK +H + G D+++G S + YSK A+++F
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
M R++ TW++ I+ P A D F + EP+ ITF + L AC++ S+L+
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GR++H + G + +V+V L+ Y KC E+ +A VF + ++N VSW +++
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q+ + +++ + G+ P S+L++C L GR +H+ + +E ++
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL--SSFEEMTS 306
V +AL+ MY KC S+Q+A F++M +R+++ W+A+I GYA G+ D F+ +
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354
Query: 307 MRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
MR E V PN VT + +L AC+ GA+E+G +I ++ K G + + ++ + G
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELS-KVGFELDRSLQTAIFNMYAKCG 413
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
+ A ++ +M + ++ W + L+
Sbjct: 414 SIYEAEQVFSKMANKNVVA-WTSFLS 438
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 6/324 (1%)
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + AI +++ G + T+ + C+ + G+ +H L G + ++ +
Sbjct: 34 AGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L++FY K +V A+ VF + ++ V+W SM+ Y N F +
Sbjct: 94 GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP S+L AC + LE GR +H + +E ++ V +AL+ MY KCG I A
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+KM ERN+V W AII A + A +E+M ++ PN VT V +L++C+
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQM--LQAGISPNAVTFVSLLNSCNTP 271
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+ +G +I +S + G++ ++ + + V A EI M R IS W A
Sbjct: 272 EALNRGRRI-HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-WSA 329
Query: 389 LLNACRVYGKPELGRIAADNLFKL 412
++ G + I D +F+L
Sbjct: 330 MIAGYAQSGYKDKESI--DEVFQL 351
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 349/586 (59%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E P+ T + A + + G +H L++G V V + DMYSK G
Sbjct: 122 MSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M R + +WN+ I V G + A+ F + G +P +T L+A
Sbjct: 182 VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHA 241
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+ G+ +H + + D +VSV N L+ Y KC V +A +F + +K VSW
Sbjct: 242 CADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSW 301
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y QN F + ++P F + SV+ A A ++ + +H + ++
Sbjct: 302 NAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIR 361
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N+FV +ALVDMY KCG+I A F+ M R+++ WNA+I GY G ++
Sbjct: 362 RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVEL 421
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + PN +T +C LSACS +G VE+G+ F SM YGI+P +HY +VDL
Sbjct: 422 FKEMKKGTIK--PNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +++A++ I++MP++P I+V+GA+L AC+++ +LG AA +FKL+P+D G H
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYH 539
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL+N++A W + VR M+ G++K GCS + + N +H F + TSH ++ +I
Sbjct: 540 VLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIY 599
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ L L +E++AAGY+PDTN +++DVE++ K+ + HSEK+A+AFGL+ G PI I
Sbjct: 600 SYLETLVDEIRAAGYVPDTN-SIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIR 658
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A K+IS + GRE+IVRD +RFH F DG CSC DYW
Sbjct: 659 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 217/422 (51%), Gaps = 14/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + P + F L K GK++H + SG ++F +MY+K
Sbjct: 21 MKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQ 80
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA MFD MPER+L WN IS G K A+ + + G PD IT + L A
Sbjct: 81 INDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPA 140
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D LL++G +HG+++R+GF+ V+V LVD Y KC V +A+V+FDG+ + VSW
Sbjct: 141 VADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSW 200
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ + E +F EGV+P + + L ACA + LE G+ VH + +
Sbjct: 201 NSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQ 260
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++ V ++L+ MY KC + A F + + LV WNA+I GYA G + AL++
Sbjct: 261 LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNA 320
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM S + P+ T+V V+ A + ++ + K + + ++ + +VD+
Sbjct: 321 FCEMQSRNIK--PDSFTMVSVIPALAEL-SIPRQAKWIHGLVIRRFLDKNVFVMTALVDM 377
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------LDP 414
+ G + A ++ M R I+ W A+++ YG LG+ + + LFK + P
Sbjct: 378 YAKCGAIHTARKLFDMMNARHVIT-WNAMIDG---YGTHGLGKTSVE-LFKEMKKGTIKP 432
Query: 415 ND 416
ND
Sbjct: 433 ND 434
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+A+ F ++ P + F L C D S L+ G+++HG ++ SGF N+ G+V
Sbjct: 13 SALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVV 72
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+ Y KC ++ A +FD + +++ V W +M+ Y QN + + L EG P
Sbjct: 73 NMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSI 132
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
I S+L A A L +G +VH ++A E + V +ALVDMY KCGS+ A + F+ M
Sbjct: 133 TIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM 192
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
R +V WN++I GY G A+ A+ F++M + P VT++ L AC+ G +E+
Sbjct: 193 DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQ--PTNVTVMGALHACADLGDLER 250
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G K + + + + ++ + + VD A +I K + + +S W A++
Sbjct: 251 G-KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS-WNAMI 305
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
ML Y ++ ++ F + + V P + + +L C + L+ G+ +H + +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
N+F + +V+MY KC I DA F++MPER+LVCWN +I GYA G A +AL
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M+ P+ +T+V +L A + + GM + + L+ G + +VD+
Sbjct: 121 RMSEEGHR--PDSITIVSILPAVADTRLLRIGMAV-HGYVLRAGFESLVNVSTALVDMYS 177
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G V A I M R +S W ++++ G E
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVS-WNSMIDGYVQSGDAE 214
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/584 (39%), Positives = 347/584 (59%), Gaps = 8/584 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---A 64
P+ FT + A + + + + G+QLH+ A++ G D VGC +MY+K + A
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328
Query: 65 DKMFDEMPERNLATWNAYISNAVL-GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K+FD++ + N+ +W A I+ V GG + A+D F + T P+ TF + L AC++
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L++G Q+ V+ GF V N L+ Y + + A+ FD + +KN +S+ ++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N E ++F +G+ F +S+LS A I + G +HA +K+ +
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ N V +AL+ MY +CG+I+ A F M +RN++ W +II G+A G A AL F +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 304 MTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M E V PN VT + VLSACS G V +G K F SM ++G+ P EHYAC+VD+LG
Sbjct: 569 MLE---EGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILG 625
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R+G + A + I MP + VW L ACRV+G ELG+ AA + + +P+D ++L
Sbjct: 626 RSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYIL 685
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A+ +W+E +RK MK+ + K AGCSW+ V+N++H F DTSH + EI
Sbjct: 686 LSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDE 745
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L L ++K GY+P+ +F L+DVEEE+K + HSEKIA+AFGLI+ PIR+ KN
Sbjct: 746 LQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKN 805
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LRICGDCHSA K+IS GRE+IVRD NRFH DG CSC++YW
Sbjct: 806 LRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 201/397 (50%), Gaps = 12/397 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PN++ F +A S G + +K+G + DV VGC DM+ K G A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F++MPERN TW I+ + G AID F+++ +G EPD T ++AC++
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG---LAKVVFDGIIDKNDVSWCS 182
LL LG+QLH +R G + V L++ Y KC+ G A+ +FD I+D N SW +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 183 MLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ YVQ Y+EE +F V P F SS L ACA +A L +G V AVK
Sbjct: 346 MITGYVQKGGYDEE-ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V ++L+ MY + G I DA AF+ + E+NL+ +N +I YA +++ AL
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F E+ A + T +LS + G + KG +I ++ +K G+K ++ +
Sbjct: 465 FNEIEDQGMGA--SAFTFASLLSGAASIGTIGKGEQI-HARVIKSGLKLNQSVCNALISM 521
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
R G ++ A+++ ++M R IS W +++ +G
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVIS-WTSIITGFAKHG 557
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 29/366 (7%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYIS--- 84
G +H +S D S +YSK G + A +F M R+L +W+A +S
Sbjct: 85 GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFA 144
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF-D 143
N +G R A+ F+++ G P+ F A ACS + +G + GF++++G+
Sbjct: 145 NNNMGFR---ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ 201
Query: 144 GNVSVCNGLVDFY--GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+V V GL+D + G+ + V K VF+ + ++N V+W M+ +Q +FL
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFK-VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFL 260
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC- 260
G EP F +S V+SACA + L LG+ +H+ A++ + + VG L++MY KC
Sbjct: 261 DMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCS 320
Query: 261 --GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD-MALSSFEEMTSMRCEAVPNYVT 317
GS+ A F+++ + N+ W A+I GY +G D AL F M + +PN+ T
Sbjct: 321 VDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM--ILTHVIPNHFT 378
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVD---RA 370
L AC+ A+ G ++F + +K G CV + + R+G +D +A
Sbjct: 379 FSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 371 YEIIKE 376
++I+ E
Sbjct: 434 FDILFE 439
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTF KA + L G+Q+ A+K G V S MY+++G DDA
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL ++N I + A++ F + G TF + L+ +
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+H +++SG N SVCN L+ Y +C + A VF+ + D+N +SW S++
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ ++F EGV P + +VLSAC+ + + G + ++ + V
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ G+ GS+ +A N MP + + + W +G G+ ++ + +
Sbjct: 612 PRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 304 MTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ Y+ L + ++ S+ + K MK
Sbjct: 672 IIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMK 707
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 6/261 (2%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR AI ++ G PDL T+ FL C +G +H L +S +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC + A +F + D +SW +M+ + N F+ G
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKC-GSIQDA 266
P ++ ++ AC+ + +G S+ +K ++ ++ VG L+DM+ K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F KMPERN V W +I G+A A+ F +M E P+ TL V+SAC+
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYE--PDRFTLSGVISACA 282
Query: 327 RAGAVEKGMKIFYSMTLKYGI 347
+ G ++ +S +++G+
Sbjct: 283 NMELLLLGQQL-HSQAIRHGL 302
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 342/559 (61%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ V++ +Y+K DA ++ DEMPERN+ +W A IS
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 555
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F+ + +G P+ TF L +C+ S QLGRQ+H ++++ F+ ++ V
Sbjct: 556 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K ++ A+ VFDG+ +++ VS +++ Y Q +E +F +REG+
Sbjct: 616 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 675
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+SVL+A + +A L+ GR VH+ ++A + + + ++L+DMY KCGS+ +
Sbjct: 676 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 735
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER ++ WNA++ GY+ G A+ F+ M + P+ VT + VLS CS
Sbjct: 736 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKE-ENKVKPDSVTFLAVLSGCSHG 794
Query: 329 GAVEKGMKIFYSMT-LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G ++G++IFY M K G +P EHY CVVDL GRAG V+ A+E IK+MP PT ++WG
Sbjct: 795 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 854
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV+ +G A L +++ ++GN+V+LSN++A+ GRW++ VR+ MK+
Sbjct: 855 SLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKA 914
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SWI + +H F A D SH R E+ A + +L ++K AGY+P+ + LYDV+
Sbjct: 915 VIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVD 974
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+E+K + HSEK+ALAFGLI P G P+RI KNLRIC DCH+ KF+S + GREV +R
Sbjct: 975 DEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLR 1034
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH G CSC DYW
Sbjct: 1035 DKNRFHHIVGGTCSCGDYW 1053
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 8/316 (2%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+A + + G E + + + L C + ++ G+++H ++++ ++ V + L+ Y
Sbjct: 463 EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC +G A+ V D + ++N VSW +M+ Y Q +F+ G P +F +
Sbjct: 523 NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+VL++C +G +LGR +H++ +K E +IFVGS+L+DMY K G I +A F+ +PER
Sbjct: 583 TVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V AII GYA G + AL F + R NYVT VL+A S A++ G +
Sbjct: 643 DVVSCTAIISGYAQLGLDEEALDLFRRL--QREGMRSNYVTYASVLTALSGLAALDHGRQ 700
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ +S L+ + ++D+ + G + + I MP R IS W A+L Y
Sbjct: 701 V-HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAMLVG---Y 755
Query: 397 GKPELGRIAADNLFKL 412
K LGR A + LFKL
Sbjct: 756 SKHGLGREAVE-LFKL 770
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 165/327 (50%), Gaps = 8/327 (2%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+PN+FTF + + ++ G+Q+H+L +K+ +FVG S DMY+K G +A +
Sbjct: 575 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 634
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD +PER++ + A IS G + A+D F L+R G + +T+ + L A S +
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L GRQ+H ++R+ V + N L+D Y KC + ++ +FD + ++ +SW +MLV
Sbjct: 695 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754
Query: 187 YVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSV--HAVAVKACV 243
Y ++ ++F + E V+P +VLS C+ + G + V K
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF- 301
E I +VD++G+ G +++A KMP E W +++G A + H ++ + F
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG--ACRVHQNVHIGEFV 872
Query: 302 -EEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + E NYV L + ++ R
Sbjct: 873 ARRLLEIESENAGNYVILSNLYASAGR 899
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++RE + N T+ + A S L G+Q+H+ L++ V + S DMYSK G
Sbjct: 670 LQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 729
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
+ ++FD MPER + +WNA + G + A++ F ++ +PD +TF A L+
Sbjct: 730 LTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLS 789
Query: 120 ACSDCSLLQLGRQLHGFLV--RSGFDGNVSVCNGLVDFYGKCNEV 162
CS + G ++ +V + GF+ + +VD +G+ V
Sbjct: 790 GCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 834
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/586 (39%), Positives = 343/586 (58%), Gaps = 5/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ FTFP LFK+ L GKQLH + K G D ++ + +MYS G
Sbjct: 131 MMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 187
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A K+FD+M +++ +W I P AI F + +P+ IT L A
Sbjct: 188 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTA 247
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ +Q+H ++ +G + + + L+D Y KC LA+ +F+ + +KN W
Sbjct: 248 CARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCW 307
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ +V++ + E +F + GV+ ++S+L AC + LELG+ +H K
Sbjct: 308 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 367
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+E ++ +G+ALVDMY KCGSI+ A F +MPE++++ W A+I G A G AL
Sbjct: 368 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALEL 427
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM E P+ +T V VL+ACS AG V +G+ F SM KYGI+P EHY C+VD+
Sbjct: 428 FHEMQ--MSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDM 485
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A ++I+ MPM P V LL+ACR++G + AA L +LDP + G +
Sbjct: 486 LGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTY 545
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++++ WE A +R+ M + IKK GCS I V +H F D SH +++EI
Sbjct: 546 VLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIY 605
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L + +K+AGY+PD + L+D++E+EK E+ HSEK+A+AFGL++ PG PIR+
Sbjct: 606 ETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVV 665
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHSA KFIS + RE+IVRD NRFH F G CSC D+W
Sbjct: 666 KNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 181/379 (47%), Gaps = 10/379 (2%)
Query: 14 PCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEM 71
PCL + KQ+HA L++ D F AF +G A +F+++
Sbjct: 42 PCLLSLEKCTTMSQL-KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQI 100
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P T N+ I P+ AI + + G +PD TF + + C +L G+
Sbjct: 101 PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS---CGVLCEGK 157
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH + GF + + N L++ Y C + A+ VFD +++K+ VSW +M+ Y Q
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 217
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
++F V+P + + +VL+ACAR LE + VH + + + + S
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTS 277
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
AL+D+Y KCG A FNKMPE+NL CWN +I G+ + ALS F EM +
Sbjct: 278 ALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 337
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
+ VT+ +L AC+ GA+E G K + K I+ +VD+ + G ++ A
Sbjct: 338 --DKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394
Query: 372 EIIKEMPMRPTISVWGALL 390
+ +EMP + ++ W AL+
Sbjct: 395 RVFQEMPEKDVMT-WTALI 412
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM--YGKCGSIQDAEIAFNKMPER 276
L C ++ L + +HA ++ C+ + F S +V GS+ A + FN++P
Sbjct: 47 LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
N+II GY ++ A+ ++ M + P+ T + +C G + +G K
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLD--PDRFTFPSLFKSC---GVLCEG-K 157
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ + K G A ++++ G + A ++ +M + +S W ++ A Y
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVS-WATMIGA---Y 213
Query: 397 GKPELGRIAADNLFKLD-PNDSGNHVLLSNMFAATGR---WEEADLVRKEMKDVGI 448
+ +L A +++ + N + L N+ A R E A V K + + GI
Sbjct: 214 AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGI 269
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 348/586 (59%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ C+SP+ F+FPC+ KA SAL G+++H + G DVFV +Y+K G
Sbjct: 164 MQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGE 223
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F + +R + +W + IS G+P A+ F +R+T PD I + L A
Sbjct: 224 IVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRA 283
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L+ G+ +HG +++ G + + L Y KC V +A++ F+ + + + + W
Sbjct: 284 YTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFW 343
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YV+N E ++F + + + P ++S ++ACA+I LEL R +
Sbjct: 344 NAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISM 403
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ V ++L+D Y KCGS+ A F+++P++++V W+A++ GY G ++
Sbjct: 404 SEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIIL 463
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + PN VT V +L+AC +G VE+G +F+ M YGI+P +HYACVVDL
Sbjct: 464 FHAMR--QAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDL 520
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +DRAY + MP+ P +SVWGALL+AC+++ LG AA+ LF LDP ++G++
Sbjct: 521 LGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHY 580
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++A++ W+ VR M++ G+ K G S I + ++ FQA D +H R+ EI
Sbjct: 581 VQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIF 640
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ L +K AG++P T L+D+ EE + +HSE++A+A+GLI+ PPG +RIT
Sbjct: 641 EEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRIT 700
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C +CH+A K IS +V RE++VRD RFH F DG CSC DYW
Sbjct: 701 KNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 208/423 (49%), Gaps = 11/423 (2%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q++A L +G + F+ + S G A K+FD+ P+ ++ WNA + G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+AI+ + ++ PD +F L ACS L++GR++HG + R GF+ +V V N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
GLV Y KC E+ A VF ++D+ VSW S++ Y QN + ++F R+ V P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ SVL A + LE G+S+H +K +E + +L +Y KCG + A + F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N++ +L+ WNA+I GY G+A+ A+ F M S P+ +T+ ++AC++ G+
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIR--PDSITVTSSIAACAQIGS 390
Query: 331 VE--KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+E + M + SM+ + ++D + G VD A + +P + + VW A
Sbjct: 391 LELARWMDEYISMS---EFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV-VWSA 446
Query: 389 LLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
++ ++G+ I + + + PND V L +G EE + M+D
Sbjct: 447 MMVGYGLHGQGRESIILFHAMRQAGVSPNDV-TFVGLLTACKNSGLVEEGWDLFHRMRDY 505
Query: 447 GIK 449
GI+
Sbjct: 506 GIE 508
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 339/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ + + FTFP + KA + G LH+L +K G HDV S +YS +G
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+FDE+P+R++ TW A S GR + AID F + G +PD L+A
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L G + ++ N V LV+ Y KC ++ A+ VFD +++K+ V+W
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N + G ++FL +E ++P F I LS+CA + L+LG ++ +
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N+F+ +AL+DMY KCG++ F +M E+++V NA I G A GH ++ +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F + + P+ T + +L C AG ++ G++ F +++ Y +K EHY C+VDL
Sbjct: 402 FGQTEKLGIS--PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GRAG++D AY +I +MPMRP VWGALL+ CR+ +L L L+P ++GN+
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNY 519
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN+++ GRW+EA VR M G+KK G SWI ++ ++H F A D SH + +I
Sbjct: 520 VQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIY 579
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L EM+ G++P T F +DVEEEEK +G+HSEK+A+A GLI+ G IR+
Sbjct: 580 AKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVV 639
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K IS I RE++VRDNNRFH F +G CSC+DYW
Sbjct: 640 KNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 168/364 (46%), Gaps = 11/364 (3%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK----MFDEMPERNLATWNAYISN 85
KQ+H + HD F+ ++ K L K +F N+ +N+ I+
Sbjct: 30 KQIHVSLINHHLHHDTFL----VNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLING 85
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V +D F+++R+ G TF L AC+ S +LG LH +V+ GF+ +
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD 145
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V+ L+ Y + A +FD I D++ V+W ++ Y + +F
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
GV+P + I VLSAC + L+ G + + ++ N FV + LV++Y KCG ++
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F+ M E+++V W+ +I GYA + F +M + P+ ++V LS+C
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK--PDQFSIVGFLSSC 323
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ GA++ G + S+ ++ ++D+ + G + R +E+ KEM + + +
Sbjct: 324 ASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 386 WGAL 389
A+
Sbjct: 383 NAAI 386
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/590 (41%), Positives = 364/590 (61%), Gaps = 7/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + P+ F+ + ++L + G+Q+H +K G DV V + +Y++T
Sbjct: 447 MRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDC 506
Query: 61 KDDADKMFDEMPERNLATWNAYI-SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
++ K+F MPE + +WN++I + A AI F+ + + G +P+ +TF L+
Sbjct: 507 MEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILS 566
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A S SLL+LGRQ+H +++ + ++ N L+ FYGKC ++ +++F + ++ D V
Sbjct: 567 AVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEV 626
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y+ N + ++G DF +++VLSACA +A LE G VHA A
Sbjct: 627 SWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACA 686
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++AC+E + VGSALVDMY KCG I A F MP RN+ WN++I GYA GH AL
Sbjct: 687 IRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKAL 746
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +M + +P++VT V VLSACS G V++G + F SM Y + P EH++C+V
Sbjct: 747 KLFTQMK--QHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMV 804
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKLDPND 416
DLLGRAG V + E IK MPM P +W +L AC R + ELGR AA L +L+P +
Sbjct: 805 DLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLN 864
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLLSNM AA G+WE+ + R M++ +KK AGCSW+++K+ +H+F A D +H
Sbjct: 865 AVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEK 924
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+I L ++ +M+ GY+P+T +ALYD+E E K + +HSEK+A+AF ++ +P
Sbjct: 925 EKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELP 983
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+CGDCH+AFK+IS IV R++I+RD+NRFH F G CSC DYW
Sbjct: 984 IRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 183/386 (47%), Gaps = 41/386 (10%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
QLH K+G DVF + +++ + G A K+FDEMP++NL +W+ +S G
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNVSV 148
P A F + G P+ + L AC + ++L+LG ++HG + +S + ++ +
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179
Query: 149 CNGLVDFYGKCN-EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
N L+ Y C+ + A+ VF+ I K SW S++ VY + + + ++F + +RE
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239
Query: 208 VE----PKDFMISSVLS-ACARI-AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
E P ++ S+++ AC+ + GL L + A K+ +++VGSALV + + G
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYG 299
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
I A++ F +M +RN V N ++ G A Q + A F+EM + +Y L+
Sbjct: 300 LIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSA 359
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA----------------CVVDLLGRAG 365
+ S LK G + G E +A +V+L +
Sbjct: 360 FTEFS---------------NLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCN 404
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
+D A I + MP + T+S W ++++
Sbjct: 405 AIDNARSIFQLMPSKDTVS-WNSIIS 429
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 16/403 (3%)
Query: 1 MRRECIS----PNDFTFPCLFK-ASSALHIPVTG-KQLHALALKSGQIHDVFVGCSAFDM 54
M+RE PN++TF L A S + +T +Q+ A KS + D++VG +
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
+++ GL D A +F++M +RN T N + + + A F ++ E + ++
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLV-EINASSY 353
Query: 115 CAFLNACSDCSLLQLGR----QLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVF 169
L+A ++ S L+ G+ ++H +L+R+ D + + N LV+ Y KCN + A+ +F
Sbjct: 354 AVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIF 413
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
+ K+ VSW S++ N E F T RR G+ P F + S LS+CA + +
Sbjct: 414 QLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIM 473
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
LG+ +H +K ++ ++ V +AL+ +Y + +++ + F MPE + V WN+ IG A
Sbjct: 474 LGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALA 533
Query: 290 -HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ A+ F EM M+ PN VT + +LSA S +E G +I +++ LK+ +
Sbjct: 534 TSEASVLQAIKYFLEM--MQAGWKPNRVTFINILSAVSSLSLLELGRQI-HALILKHSVA 590
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++ G+ ++ I M R W A+++
Sbjct: 591 DDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 38/383 (9%)
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
N D ++ QLH + ++G +V CN LV+ + + + A+ +FD + KN V
Sbjct: 47 NRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLV 106
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG--LELGRSVHA 236
SW ++ Y QN + C +F G+ P + I S L AC + L+LG +H
Sbjct: 107 SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHG 166
Query: 237 VAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ K+ ++ + + L+ MY C SI DA F ++ + WN+II Y +G
Sbjct: 167 LISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGD-- 224
Query: 296 MALSSFEEMTSMRCEAV-----PNYVTLVCVLS-ACSRAGAVEKGMKIFYSMTLKYGIKP 349
A+S+F+ +SM+ EA PN T +++ ACS V+ G+ + M +
Sbjct: 225 -AISAFKLFSSMQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSS 280
Query: 350 GAEHY---ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
+ + +V R GL+D A I ++M R +++ G ++ R + E +I
Sbjct: 281 FVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFK 340
Query: 407 DNLFKLDPNDSGNHVLL------SNMFAATGRWEE--ADLVRKEMKDVGIKKG------- 451
+ ++ N S VLL SN+ + +E A L+R + DV I G
Sbjct: 341 EMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLY 400
Query: 452 AGCSWISVKNRIHIFQ---AKDT 471
A C+ ++ N IFQ +KDT
Sbjct: 401 AKCN--AIDNARSIFQLMPSKDT 421
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/600 (38%), Positives = 352/600 (58%), Gaps = 16/600 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
M E + P++FT + A S L + TGK+LHA ALK+G + + FVG + DMY
Sbjct: 206 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 265
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFL 118
++FD M +R + WNA I+ K A+ FI + + G + T +
Sbjct: 266 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 325
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC +HGF+V+ G D + V N L+D Y + ++ +A +F + D++ V
Sbjct: 326 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 385
Query: 179 SWCSMLVVYVQNYEEENGCQMFLT-----------ARREGVEPKDFMISSVLSACARIAG 227
+W +M+ YV + E+ + A R ++P + ++L +CA ++
Sbjct: 386 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 445
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L G+ +HA A+K + ++ VGSALVDMY KCG +Q + F+++P++N++ WN II
Sbjct: 446 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 505
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G+ A+ M M PN VT + V +ACS +G V++G++IFY M YG+
Sbjct: 506 YGMHGNGQEAIDLLRMM--MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 563
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKPELGRIAA 406
+P ++HYACVVDLLGRAG + AY+++ MP W +LL A R++ E+G IAA
Sbjct: 564 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 623
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
NL +L+PN + ++VLL+N++++ G W++A VR+ MK+ G++K GCSWI + +H F
Sbjct: 624 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKF 683
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D+SH ++ ++ L L E M+ GY+PDT+ L++VEE+EK + HSEK+A+AF
Sbjct: 684 VAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAF 743
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G++ PG IR+ KNLR+C DCH A KFIS IV RE+I+RD RFHRF +G CSC DYW
Sbjct: 744 GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 196/391 (50%), Gaps = 9/391 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDA 64
I P+++ FP L KA + L GKQ+HA K G + V V + ++Y K G
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FD + ERN +WN+ IS+ + + A++AF + EP T + + ACS+
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 125 SL---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L +G+Q+H + +R G + N + N LV YGK ++ +KV+ ++ V+W
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK- 240
++L QN + + EGVEP +F ISSVL AC+ + L G+ +HA A+K
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N FVGSALVDMY C + F+ M +R + WNA+I GY+ H AL
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 304
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T+ V+ AC R+GA + I + +K G+ ++D+
Sbjct: 305 FIGMEE-SAGLLANSTTMAGVVPACVRSGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDM 362
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G +D A I +M R ++ W ++
Sbjct: 363 YSRLGKIDIAMRIFGKMEDRDLVT-WNTMIT 392
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 10/246 (4%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGL 164
G +PD F A L A +D ++LG+Q+H + + G+ +V+V N LV+ Y KC + G
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
VFD I ++N VSW S++ + E + F E VEP F + SV++AC+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 225 IA---GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
+ GL +G+ VHA ++ E N F+ + LV MYGK G + +++ R+LV W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYS 340
N ++ + L + E + M E V P+ T+ VL ACS + G K ++
Sbjct: 184 NTVLSSLCQN---EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG-KELHA 239
Query: 341 MTLKYG 346
LK G
Sbjct: 240 YALKNG 245
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 306/481 (63%), Gaps = 14/481 (2%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G PD F + AC S +G+ +H F V++G+D +V V + +VD Y KC E+G A
Sbjct: 5 GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ +FD + D+N VSW M+ Y Q E+E ++F A E ++ DF SSV+ C
Sbjct: 65 RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNS 124
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
LELG+ +H + +K + + FVGS+L+ +Y KCG I+DA + F+++P RNL WNA++
Sbjct: 125 TLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAML 184
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
A H + A F++M + + PN++T +CVL ACS AG VEKG + ++ + +Y
Sbjct: 185 IACAQHAHTEKAFDLFKQMEGVGMK--PNFITFLCVLYACSHAGLVEKG-QFYFELMKEY 241
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
GI+PGA+HYA +VDLLGRAG + A IIK+MPM PT SVWGALL CR++G EL
Sbjct: 242 GIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFV 301
Query: 406 ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHI 465
AD +F+L P S A GR+EEA RK ++D G+KK G SW+ NRIH
Sbjct: 302 ADRVFELGPVSS-----------AAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHT 350
Query: 466 FQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALA 525
F A D SH +I L +L EEM+ AGYI DT+F L +V+ EEK + +HSE++A+A
Sbjct: 351 FAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIA 410
Query: 526 FGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
FGLI+ PP PIR+ KNLR+CGDCH+A KF+S GR +IVRDNNRFHRF DG CSC DY
Sbjct: 411 FGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDY 470
Query: 586 W 586
W
Sbjct: 471 W 471
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 149/297 (50%), Gaps = 3/297 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+D FP KA L G+ +H+ A+K+G DVFVG S DMY+K G DA
Sbjct: 6 VRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDAR 65
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
KMFDEMP+RN+ +W+ I G + A+ F + + TF + + C + +
Sbjct: 66 KMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNST 125
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LL+LG+Q+HG +++ +D + V + L+ Y KC + A +VF I +N W +ML+
Sbjct: 126 LLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLI 185
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Q+ E +F G++P VL AC+ +E G+ + + +E
Sbjct: 186 ACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEP 245
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF 301
+++VD+ G+ G ++DA KMP E W A++ G + H D L+SF
Sbjct: 246 GAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGC--RIHGDTELASF 300
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFTF + + + GKQ+H L LK+ FVG S +YSK G+ +D
Sbjct: 105 EDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIED 164
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F E+P RNL WNA + + A D F + G +P+ ITF L ACS
Sbjct: 165 AYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSH 224
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L++ G+ + G + +VD G+ ++ A + + ++ + W +
Sbjct: 225 AGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGA 284
Query: 183 ML 184
+L
Sbjct: 285 LL 286
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 349/580 (60%), Gaps = 6/580 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +TFP LFK+ GKQ+H + K G D + + +MYS G A K+
Sbjct: 86 PDRYTFPSLFKSCRN---SSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKV 142
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSL 126
FD+M ++ + +W I +P A+ F + ++ +P+ +T L AC+
Sbjct: 143 FDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARD 202
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L + +++H ++ GF +V + L+D Y KC V LA+ +FD +KN SW M+
Sbjct: 203 LAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMING 262
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+V++ E +F + +G++ ++S+L AC + LELG+ +HA K ++ +
Sbjct: 263 HVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVD 322
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ +G+ALVDMY KCGSI+ A F++MPE++++ W A+I G A G A+ AL F+EM
Sbjct: 323 VALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHI 382
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ +T V VL+ACS AG V++G+ F SM+ YGI+P EHY +VD+LGRAG
Sbjct: 383 KGVK--PDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGR 440
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A E+IK MPM P V G LL ACR++G E AA L ++DP SG +VLLSN+
Sbjct: 441 IAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNI 500
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+ ++ +WEEA R+ M + G++K GCS I V +H F D+SH +++EI ML +
Sbjct: 501 YKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDM 560
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K AGY+PD + L+D+ EEEK TE+ HSEK+A+AFGL++ G PIR+ KNLRIC
Sbjct: 561 ISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRIC 620
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSA K IS + RE+IVRD NRFH F DG CSC +W
Sbjct: 621 SDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN+ T + A + K++H + G V + D+Y K G
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD+ E+NL +WN I+ V + A+ F ++ G + D +T + L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LG+ LH ++ + D +V++ LVD Y KC + A VF + +K+ ++W
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
++++ + EN Q F +GV+P VL+AC+ ++ G S ++++
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ I LVD+ G+ G I +AE MP
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 232 RSVHAVAVKACVEGNIFVGSALVDM--YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
+ +HA ++ + + F S +V + GS+Q A + F+++P N+II G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
+ AL ++EM M +P+ T + +C + +G +I + + K G
Sbjct: 65 DKNLHQEALLFYQEM--MVQGLIPDRYTFPSLFKSCRNSS---EGKQI-HCHSTKLGFAS 118
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
++++ G + A ++ +M + +S W ++ + +P D +
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVS-WATMIGVHAQWDQPNEAVRLFDRM 177
Query: 410 FKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
K N N V L N+ A R + +V++
Sbjct: 178 MK-SENVKPNEVTLVNVLTACARARDLAMVKR 208
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/592 (39%), Positives = 348/592 (58%), Gaps = 39/592 (6%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+HA SG I +++ DMY+K G DA+K+FDEM R+L +WN IS V
Sbjct: 138 GKQVHAHIKTSGSI-GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVK 196
Query: 89 GG---RPKNAIDAFINLRRTGGEPDLITFCAFLN------------------ACSDCSL- 126
GG + +N D N R +I+ C N + C++
Sbjct: 197 GGNFEKARNLFDKMPN-RDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTIS 255
Query: 127 -----------LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L +G+++HG ++R G D + V L+D YGKC + A+ +FD + ++
Sbjct: 256 SALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEER 315
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VSW +M+ Y++N E G +F + P DF + VL+ACA +A +LG+ +H
Sbjct: 316 DVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIH 375
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A V+ + SALV MY KCG I++A+ F +P+ +L W +++ GYA G D
Sbjct: 376 AYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHD 435
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL FE + ++ P+ + + VLSAC+ AG V+KG++ F+S+ K+G+ +HYA
Sbjct: 436 KALHFFELL--LKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYA 493
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C++DLL RAG A II EMP++P +W ALL CR++G EL + AA +LF+++P
Sbjct: 494 CIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPE 553
Query: 416 DSGNHVLLSNMFAATG-RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+ +V L+N++A+ G R EEA+ +R+ M GI K G SWI ++ +H+F D SH
Sbjct: 554 NPATYVTLANIYASAGMRAEEAN-IRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHP 612
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
++ EI L++L + MK GY+PDTNF L+DVE E+K + +HSEK+A+AFG+I+ P G
Sbjct: 613 KSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSG 672
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI++ KNLR C DCH+A KFIS I GR++IVRD+NRFH F G CSC DYW
Sbjct: 673 TPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 154/305 (50%), Gaps = 5/305 (1%)
Query: 22 ALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNA 81
+LH+ GK++H ++ G D V CS DMY K G ++A +FD+M ER++ +W
Sbjct: 266 SLHM---GKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTT 322
Query: 82 YISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
I + GR + F +L + P+ TF LNAC+D + LG+Q+H ++VR G
Sbjct: 323 MIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG 382
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
FD S + LV Y KC ++ AK VF+ + + SW S+LV Y Q+ + + F
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFE 442
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ G +P VLSACA ++ G H++ K + I + ++D+ +
Sbjct: 443 LLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARA 502
Query: 261 GSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G +AE N+MP + + W A++GG G+ ++A + + + + E YVTL
Sbjct: 503 GQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLA 562
Query: 320 CVLSA 324
+ ++
Sbjct: 563 NIYAS 567
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PNDFTF + A + L GKQ+HA ++ G + MYSK G ++A
Sbjct: 348 IMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAK 407
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ +P+ +L +W + + G+ A+ F L ++G +PD I F L+AC+
Sbjct: 408 SVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAG 467
Query: 126 LLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L+ G + H + G + ++D + + A+ + + + I + W ++
Sbjct: 468 LVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAAL 527
Query: 184 L 184
L
Sbjct: 528 L 528
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 49/247 (19%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P + ++L C + L+ G+ VHA +K +++ + L+DMY KCGS+ DAE
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEK 174
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY--VTLVCVLSACS 326
F++M R+L WN +I GY G+ + A + F++M PN + ++S C
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM--------PNRDNFSWTAIISGCV 226
Query: 327 RAGAVEKGMKIFYSMT-----------------------------------LKYGIKPGA 351
+ E+ ++++ M ++ G+
Sbjct: 227 QHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDE 286
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ ++D+ G+ G ++ A I +M R +S W +++ G+ E G +L
Sbjct: 287 VVWCSLLDMYGKCGSIEEARYIFDKMEERDVVS-WTTMIHTYLKNGRREEGFALFRHLMN 345
Query: 412 LD--PND 416
+ PND
Sbjct: 346 SNIMPND 352
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/600 (38%), Positives = 352/600 (58%), Gaps = 16/600 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
M E + P++FT + A S L + TGK+LHA ALK+G + + FVG + DMY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFL 118
++FD M +R + WNA I+ K A+ FI + + G + T +
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC +HGF+V+ G D + V N L+D Y + ++ +A +F + D++ V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 179 SWCSMLVVYVQNYEEENGCQMFLT-----------ARREGVEPKDFMISSVLSACARIAG 227
+W +M+ YV + E+ + A R ++P + ++L +CA ++
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L G+ +HA A+K + ++ VGSALVDMY KCG +Q + F+++P++N++ WN II
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G+ A+ M M PN VT + V +ACS +G V++G++IFY M YG+
Sbjct: 593 YGMHGNGQEAIDLLRMM--MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 650
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKPELGRIAA 406
+P ++HYACVVDLLGRAG + AY+++ MP W +LL A R++ E+G IAA
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 710
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
NL +L+PN + ++VLL+N++++ G W++A VR+ MK+ G++K GCSWI + +H F
Sbjct: 711 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKF 770
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D+SH ++ ++ L L E M+ GY+PDT+ L++VEE+EK + HSEK+A+AF
Sbjct: 771 VAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAF 830
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G++ PG IR+ KNLR+C DCH A KFIS IV RE+I+RD RFHRF +G CSC DYW
Sbjct: 831 GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 196/391 (50%), Gaps = 9/391 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDA 64
I P+++ FP L KA + L GKQ+HA K G + V V + ++Y K G
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FD + ERN +WN+ IS+ + + A++AF + EP T + + ACS+
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 125 SL---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L +G+Q+H + +R G + N + N LV YGK ++ +KV+ ++ V+W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK- 240
++L QN + + EGVEP +F ISSVL AC+ + L G+ +HA A+K
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N FVGSALVDMY C + F+ M +R + WNA+I GY+ H AL
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T+ V+ AC R+GA + I + +K G+ ++D+
Sbjct: 392 FIGMEE-SAGLLANSTTMAGVVPACVRSGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDM 449
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G +D A I +M R ++ W ++
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVT-WNTMIT 479
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R+ W + + V + A+ ++++ G +PD F A L A +D ++LG+Q+
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 134 HGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
H + + G+ +V+V N LV+ Y KC + G VFD I ++N VSW S++ +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIA---GLELGRSVHAVAVKACVEGNIFV 249
E + F E VEP F + SV++AC+ + GL +G+ VHA ++ E N F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+ LV MYGK G + +++ R+LV WN ++ + L + E + M
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN---EQLLEALEYLREMVL 295
Query: 310 EAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
E V P+ T+ VL ACS + G K ++ LK G
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTG-KELHAYALKNG 332
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/619 (37%), Positives = 358/619 (57%), Gaps = 46/619 (7%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL----- 60
+ P+ FP + K+ + L G+ LH ++ G D++ G + +MYSK
Sbjct: 102 LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 61 ---------------------------KDDADKMFDEMPERNLATWNAYISNAVLGGRPK 93
+D K+F+ MPE++L +W N ++ G +
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSW-----NTIIAGNAR 216
Query: 94 NAI--DAFINLRRTGG---EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
N + + +R GG +PD T + L ++ + G+++HG +R G D ++ V
Sbjct: 217 NGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV 276
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y KC V + VF + +++ +SW S++ VQN + G + F +
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+PK + SS++ ACA + L LG+ +H + + NIF+ S+LVDMY KCG+I+ A+
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
F++M R++V W A+I G A G A A+ FE+M + E + PN+V + VL+ACS
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMET---EGIKPNHVAFMAVLTACSH 453
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++ K F SMT +GI PG EHYA V DLLGRAG ++ AY+ I M + PT S+W
Sbjct: 454 GGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWA 513
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL+ACRV+ ++ A+ + ++DPN++G ++LL+N+++A RW+EA R M+ +G
Sbjct: 514 TLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIG 573
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
I+K CSWI VKN+++ F A D SH +I+ + L E M+ GY+PDT+ +DVE
Sbjct: 574 IRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVE 633
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K V HSE++A+ FG+I P G+ IR+TKNLR+C DCH+A KFIS IVGRE++VR
Sbjct: 634 EEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVR 693
Query: 568 DNNRFHRFWDGYCSCSDYW 586
DN+RFH F +G CSC DYW
Sbjct: 694 DNSRFHHFKNGTCSCGDYW 712
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 179/402 (44%), Gaps = 37/402 (9%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+QLHA LK Q + +YS L D+ ++F+ + W + I
Sbjct: 25 AQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P ++ +FI + +G PD F + L +C+ L LG LHG+++R G D ++
Sbjct: 84 HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYT 143
Query: 149 CNGLVDFYGKC--------NEVGLAKV------------------------VFDGIIDKN 176
N L++ Y K +G +V +F+ + +K+
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ +N E +M ++P F +SSVL A + G+ +H
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+++ ++ +I+V S+L+DMY KC + D+ F + ER+ + WN+II G G D
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F +M + + P + ++ AC+ + G ++ +T + G +
Sbjct: 324 GLRFFRQMLMAKIK--PKSYSFSSIMPACAHLTTLHLGKQLHGYIT-RNGFDENIFIASS 380
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+VD+ + G + A +I M +R +S W A++ C ++G+
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALHGQ 421
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 335/571 (58%), Gaps = 2/571 (0%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
+ K + + + GK HA L G D+ +MYSK G D A ++FDEMP R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
L +WN I + G A+D + ++R G T + L AC+ L + LH
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
F +++ D NV V L+D Y KC + A VF+ + D++ V+W SM YVQN E
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
+F A G++ F++SSV+ ACA +A + G+ V+A+ K+ NIFV S+L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY KCG I+++ F + +RN+V WNA+I G + + + FE+M M PN
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS--PND 367
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
VT V VLSAC G V+KG K F MT ++ + P HY+C+VD L RAG + AY++I
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEE 435
++P + S+WG+LL +CR +G EL +AA LF ++P++SGN++LLSNM+AA G+W+E
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDE 487
Query: 436 ADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGY 495
+RK +K+ +KK G SWI +K+++H+F + +H + EI + L ++ +E++ GY
Sbjct: 488 VAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGY 547
Query: 496 IPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKF 555
+T L+ V E K + HHSEK+A GL+ +PP PIRI KNLRICGDCHS K
Sbjct: 548 KVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKL 607
Query: 556 ISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S R+VIVRD NRFH F +G CSC D+W
Sbjct: 608 ASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 206 EGVEPKDF------MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
E KDF + +L CA+ L G++ HA + ++ ++ + L++MY K
Sbjct: 52 EKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSK 111
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTL 318
CGS+ A F++MP R+LV WN +IG G + AL + + M+ E P + T+
Sbjct: 112 CGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEAL---DLLLQMQREGTPFSEFTI 168
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
VL AC+ A+ + ++ ++ +K + ++D+ + GL+ A + + MP
Sbjct: 169 SSVLCACAAKCALSE-CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227
Query: 379 MRPTISVWGAL 389
R ++ W ++
Sbjct: 228 DRSVVT-WSSM 237
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + F + A + L + GKQ++AL KSG ++FV S DMY+K G +++
Sbjct: 262 LKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESY 321
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F ++ +RN+ WNA IS R + F +++ G P+ +TF + L+AC
Sbjct: 322 KVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMG 381
Query: 126 LLQLGRQLHGFLVR 139
L++ G++ + +
Sbjct: 382 LVKKGQKYFDLMTK 395
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/600 (38%), Positives = 352/600 (58%), Gaps = 16/600 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
M E + P++FT + A S L + TGK+LHA ALK+G + + FVG + DMY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFL 118
++FD M +R + WNA I+ K A+ FI + + G + T +
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC +HGF+V+ G D + V N L+D Y + ++ +A +F + D++ V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 179 SWCSMLVVYVQNYEEENGCQMFLT-----------ARREGVEPKDFMISSVLSACARIAG 227
+W +M+ YV + E+ + A R ++P + ++L +CA ++
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L G+ +HA A+K + ++ VGSALVDMY KCG +Q + F+++P++N++ WN II
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G+ A+ M M PN VT + V +ACS +G V++G++IFY M YG+
Sbjct: 593 YGMHGNGQEAIDLLRMM--MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 650
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKPELGRIAA 406
+P ++HYACVVDLLGRAG + AY+++ MP W +LL A R++ E+G IAA
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 710
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
NL +L+PN + ++VLL+N++++ G W++A VR+ MK+ G++K GCSWI + +H F
Sbjct: 711 QNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKF 770
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D+SH ++ ++ L L E M+ GY+PDT+ L++VEE+EK + HSEK+A+AF
Sbjct: 771 VAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAF 830
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G++ PG IR+ KNLR+C DCH A KFIS IV RE+I+RD RFHRF +G CSC DYW
Sbjct: 831 GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 196/391 (50%), Gaps = 9/391 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDA 64
I P+++ FP L KA + L GKQ+HA K G + V V + ++Y K G
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FD + ERN +WN+ IS+ + + A++AF + EP T + + ACS+
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 125 SL---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L +G+Q+H + +R G + N + N LV YGK ++ +KV+ ++ V+W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK- 240
++L QN + + EGVEP +F ISSVL AC+ + L G+ +HA A+K
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N FVGSALVDMY C + F+ M +R + WNA+I GY+ H AL
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T+ V+ AC R+GA + I + +K G+ ++D+
Sbjct: 392 FIGMEE-SAGLLANSTTMAGVVPACVRSGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDM 449
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G +D A I +M R ++ W ++
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVT-WNTMIT 479
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R+ W + + V + A+ ++++ G +PD F A L A +D ++LG+Q+
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 134 HGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
H + + G+ +V+V N LV+ Y KC + G VFD I ++N VSW S++ +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIA---GLELGRSVHAVAVKACVEGNIFV 249
E + F E VEP F + SV++AC+ + GL +G+ VHA ++ E N F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+ LV MYGK G + +++ R+LV WN ++ + L + E + M
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN---EQLLEALEYLREMVL 295
Query: 310 EAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
E V P+ T+ VL ACS + G K ++ LK G
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTG-KELHAYALKNG 332
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/558 (42%), Positives = 339/558 (60%), Gaps = 4/558 (0%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
QLH + ++ G ++FV + DMYSK+GL +A ++FD+MP+++ W A I G
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199
Query: 91 RPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
+ A+ AF ++RR G D C+ L+A L R +H +++SGF+ V+V
Sbjct: 200 NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVR 259
Query: 150 NGLVDFYGKCNEV-GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L D Y K ++ A+VV N VS S++ Y++ E MF+ RR+GV
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGV 319
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP +F SS++ CA A LE G +HA +K + + FV S L+DMYGKCG I +
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ + WNA I A GH A+ +F+ MTS PN++T V +L+ACS A
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIR--PNHITFVSLLTACSHA 437
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G+K FYSM +GI+P EHY+C++D+ GRAG +D A + I EMP++P W +
Sbjct: 438 GLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCS 497
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACR+ G ELG IAADN+ KL+P+++G HV LS ++A+ G+WE+ VRK M+D I
Sbjct: 498 LLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRI 557
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ + H+F ++D SH + +I L +L E +K GY+PDT F ++E+
Sbjct: 558 KKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLED 617
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
K + +HSE+IA+AF LI++P PI + KNLRIC DCHSA KFIS + R++IVRD
Sbjct: 618 TAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRD 677
Query: 569 NNRFHRFWDGYCSCSDYW 586
N+RFH F G CSC DYW
Sbjct: 678 NSRFHHFVKGGCSCGDYW 695
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 7/372 (1%)
Query: 29 GKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ LHA L L F+ MYS A ++FD MP NL +W +S
Sbjct: 36 GRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLT 95
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
++A+ AF ++ R G P + A + + G QLH VR GFD +
Sbjct: 96 QNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELF 155
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V + L D Y K + A VFD + K+ V+W +M+ Y +N E F RREG
Sbjct: 156 VASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREG 215
Query: 208 VEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD- 265
+ D ++ SVLSA + L R++H+ +K+ E + V +AL DMY K + +
Sbjct: 216 LVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNA 275
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + N+V ++I GY + AL F E+ E PN T ++ C
Sbjct: 276 ARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVE--PNEFTFSSMIKGC 333
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +E+G ++ ++ +K + + + ++D+ G+ GL+ + ++ KE+ I+
Sbjct: 334 AMQALLEQGAQL-HAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIA- 391
Query: 386 WGALLNACRVYG 397
W A +N +G
Sbjct: 392 WNAAINVLAQHG 403
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 17/289 (5%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSV 148
G+ ++D +LR A L +C L+LGR LH LV SG + +
Sbjct: 6 GQHSRSLDTATSLR----------LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFL 55
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y C +V A +FD + N VSW +++ QN + F + R G+
Sbjct: 56 ANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGL 115
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P F +SS A A +A G +H V V+ + +FV S L DMY K G + +A
Sbjct: 116 VPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACR 175
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F++MP+++ V W A+I GYA G+ + A+ +F +M +V L VLSA +
Sbjct: 176 VFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHV-LCSVLSA---S 231
Query: 329 GAVEKG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
G ++ G + +S +K G + + D+ +A +D A ++K
Sbjct: 232 GGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVK 280
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 341/580 (58%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P +FTF + A L G+Q+H +K + +VFV + D YSK +A K+
Sbjct: 297 PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKL 356
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F EMPE + ++N ++ GR K +++ F L+ TG + F L+ + L
Sbjct: 357 FYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNL 416
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+GRQ+H + + + V N LVD Y KC E G A +F + ++ V W +M+ Y
Sbjct: 417 DIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSY 476
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
VQ E+G ++F+ +R + +S++ ACA +A L LG+ +H+ + + N+
Sbjct: 477 VQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNV 536
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F GSALVDMY KCGSI+DA F +MP RN V WNA+I YA G D L FEEM +
Sbjct: 537 FSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEM--V 594
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R P+ V+L+ +L ACS G VE+G++ F SMT Y + P EHYA +D+L R G
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRF 654
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGNHVLLSNM 426
D A +++ +MP P +W ++LN+C ++ EL + AA+ LF + D+ +V +SN+
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+AA G W+ V+K M++ G+KK SW+ +K++ H+F A D +H + EI L +L
Sbjct: 715 YAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDEL 774
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
E+M GY PD++ AL++V+EE K+ + +HSE+IA+AF LI+ P G PI + KNLR C
Sbjct: 775 EEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRAC 834
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A K IS IV RE+ VRD++RFH F DG+C+C DYW
Sbjct: 835 TDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 194/392 (49%), Gaps = 4/392 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I P+ + L + +Q+H+ +K G + V S D Y KT
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+++PER+ T+NA ++ G + AI+ F ++ G P TF A L A
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ G+Q+HGF+V+ F NV V N L+DFY K + V A +F + + + +S+
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y N + ++F + G + ++F +++LS A L++GR +H+ +
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
I VG++LVDMY KCG +A F+ + ++ V W A+I Y +G + L
Sbjct: 429 TDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKL 488
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM R + + T ++ AC+ ++ G K +S + G + +VD+
Sbjct: 489 FVEM--QRAKIGADAATYASIVRACASLASLTLG-KQLHSHIIGSGYISNVFSGSALVDM 545
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A ++ +EMP+R ++S W AL++A
Sbjct: 546 YAKCGSIKDALQMFQEMPVRNSVS-WNALISA 576
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 168/350 (48%), Gaps = 8/350 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K+G +A +FD M +R TW I + + A FI + R G +PD ++
Sbjct: 142 YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSL 201
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L+ ++ + RQ+H +++ G+D + V N L+D Y K +GLA +F+ I +
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE 261
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ V++ ++L Y + +F + G P +F +++L+A ++ +E G+ V
Sbjct: 262 RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQV 321
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK N+FV +AL+D Y K + +A F +MPE + + +N ++ YA G
Sbjct: 322 HGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRV 381
Query: 295 DMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+L F+E+ T P + TL LS + + ++ G +I +S T+
Sbjct: 382 KESLELFKELQFTGFDRRNFP-FATL---LSIAAISLNLDIGRQI-HSQTIVTDAISEIL 436
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+VD+ + G A I ++ ++ ++ W A++++ G E G
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP-WTAMISSYVQKGLHEDG 485
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I + T+ + +A ++L GKQLH+ + SG I +VF G + DMY+K G
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +MF EMP RN +WNA IS G + F + R+G +PD ++ + L A
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611
Query: 121 CSDCSLLQLGRQLHGFLVR 139
CS C L++ G Q + R
Sbjct: 612 CSHCGLVEEGLQYFDSMTR 630
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 24/315 (7%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
RNL T + +P +DA ++ +TG P+ + S LQ G L
Sbjct: 73 RNLVT-------TLTAPKPHLHVDA--SIIKTGFNPNTYRSNFLVK-----SFLQRG-DL 117
Query: 134 HGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
+G R FD N+ N ++ Y K + A+ +FD + + V+W ++ Y Q
Sbjct: 118 NG--ARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQ 175
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N + +F+ R G++P ++++LS + R VH+ +K + + V
Sbjct: 176 NNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVV 235
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
++L+D Y K S+ A FN +PER+ V +NA++ GY+ +G A++ F +M +
Sbjct: 236 SNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGY 295
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P T +L+A + +E G ++ + +K ++D + V
Sbjct: 296 R--PTEFTFAAILTAGIQLDDIEFGQQV-HGFVVKCNFVWNVFVANALLDFYSKHDRVVE 352
Query: 370 AYEIIKEMPMRPTIS 384
A ++ EMP IS
Sbjct: 353 ASKLFYEMPEVDGIS 367
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 99/256 (38%), Gaps = 46/256 (17%)
Query: 197 CQMFLTARREGVEPKDFMIS---SVLSACAR-----IAGLELGRSVHAVAVKACVEGNIF 248
C +F A G + + +S +++ C R + + V A +K N +
Sbjct: 43 CLIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTY 102
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNL------------------------------ 278
+ LV + + G + A F++MP +N+
Sbjct: 103 RSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRT 162
Query: 279 -VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
V W +IGGYA A F EM R P++V+L +LS + +V + ++
Sbjct: 163 AVTWTMLIGGYAQNNQFREAFGLFIEMG--RHGIDPDHVSLATLLSGFTEFDSVNEVRQV 220
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+S +K G ++D + + A+++ ++P R +++ + ALL Y
Sbjct: 221 -HSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT-FNALLTG---YS 275
Query: 398 KPELGRIAADNLFKLD 413
K R A + FK+
Sbjct: 276 KEGFNREAINLFFKMQ 291
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 341/587 (58%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ PN FT L ++ + G+ +H K G D V MY K+
Sbjct: 143 MRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRC 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D +K+F+ M +L +WNA +S F + G +P++ TF + L +
Sbjct: 203 VEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRS 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + G+Q+H ++++ D + V LVD Y K + A V FD +++++ SW
Sbjct: 263 CSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q + E + F +REG++P ++ ++S LS C+ +A LE GR +HAVAVK
Sbjct: 323 TVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVK 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A G+IFVGSALVD+YGKCG ++ AE F + R++V WN II GY+ G + AL +
Sbjct: 383 AGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEA 442
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M S E + P+ T + VLSACS G VE+G K F SM+ YGI P EHYAC+VD
Sbjct: 443 FRMMLS---EGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVD 499
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGRAG + I+EM + P +W +L AC+++G + G AA LF+++P +
Sbjct: 500 ILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSS 559
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN+FA+ GRW++ +R M GIKK GCSW+ V ++H+F ++D SH + EI
Sbjct: 560 YILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREI 619
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L KL + + + GY+P T L++V +EKM + +HSE++AL+F L++ PIRI
Sbjct: 620 YAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRI 679
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH K IS I +E++VRD RFH F G CSC D W
Sbjct: 680 FKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 5/399 (1%)
Query: 3 RECISP-NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+EC + + FT + K + GK LHALAL+SG D F+GCS DMYSK G
Sbjct: 43 KECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTV 102
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
DA K+F ++ ++ W+A I+ G + A + F +RR G P+ T + ++
Sbjct: 103 YDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTA 162
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ L+ G+ +HG + + GF+ + V N L+ Y K V VF+ + + + VSW
Sbjct: 163 TNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWN 222
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++L + + G ++F EG +P F SVL +C+ + E G+ VHA +K
Sbjct: 223 ALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKN 282
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + FVG+ALVDMY K ++DA +AF+++ R++ W II GYA A+ A+ F
Sbjct: 283 SSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYF 342
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M R PN TL LS CS +E G ++ +++ +K G + +VDL
Sbjct: 343 RQMQ--REGIKPNEYTLASCLSGCSHMATLENGRQL-HAVAVKAGHFGDIFVGSALVDLY 399
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G+ G ++ A I K + R +S W +++ +G+ E
Sbjct: 400 GKCGCMEHAEAIFKGLISRDIVS-WNTIISGYSQHGQGE 437
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 2/274 (0%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A+++F MPE+N +WNA ++ G K + F ++ + T L C++
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ G+ LH +RSG + + + LVD Y KC V A VF I + + V+W +M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Q + ++F RR+G P F +SS++S + L G+S+H K
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E + V + L+ MY K ++D F M +LV WNA++ G+ F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
M + PN T + VL +CS E G ++
Sbjct: 244 MLLEGFK--PNMFTFISVLRSCSSLLDPEFGKQV 275
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
LA+ +F G+ +KN VSW ++L Y Q + + ++F + + F +S+VL CA
Sbjct: 3 LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
L G+ +HA+A+++ E + F+G +LVDMY KCG++ DA F K+ ++V W+A
Sbjct: 63 NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I G QGH A F M R A PN TL ++S + G + G I +
Sbjct: 123 MITGLDQQGHGQEAAELFHLMR--RKGARPNQFTLSSLVSTATNMGDLRYGQSI-HGCIC 179
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
KYG + ++ + ++ V+ ++ + M P + W ALL+ Y GR
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSG--FYDSQTCGR 236
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/592 (41%), Positives = 359/592 (60%), Gaps = 12/592 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR ++P F +A++AL P+ G QLH + ++ G ++FV + DMYSK GL
Sbjct: 113 MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 172
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLN 119
+A ++FD+MP+++ W A I G + A+ +F +++R G D FC+ L+
Sbjct: 173 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 232
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---N 176
A L + +H + ++GF+ V+V N L+D Y K +V A V ID N
Sbjct: 233 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK--IDPGGWN 290
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VS SM+ Y++ E +++ RR+GVEP +F SS++ CA A LE G +HA
Sbjct: 291 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 350
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + + FVGS LVDMYGKCG I + FN++ R + WNA+I +A GH
Sbjct: 351 QVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGRE 410
Query: 297 ALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ +F+ M + +R PN++ V +L+ACS AG V++G+K FYSM +GI+P EHY
Sbjct: 411 AIQAFDRMIYSGIR----PNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHY 466
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
+C++D GRAG +D AY+ I EMP++P W +LL ACR+ G ELG +AA NL KL+P
Sbjct: 467 SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEP 526
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++G HV LS ++A+ G+WE+ VRK M+D IKK G SW+ + H+F ++D SH
Sbjct: 527 GNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHP 586
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ +I L +L +K GYIPDT+F ++E+ K + +HSE+IA+AF LI++P
Sbjct: 587 QQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPAT 646
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI + KNLRIC DCH+AFKFI + R++IVRDN+RFH F +G CSC DYW
Sbjct: 647 KPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 7/372 (1%)
Query: 29 GKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ LHA L L F+ MYS A ++F MP RN +W +S
Sbjct: 39 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 98
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+A+ AF +RR G P + A + G QLH VR GFD +
Sbjct: 99 QNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELF 158
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V + L D Y KC + A VFD + K+ V+W +M+ Y +N E F +REG
Sbjct: 159 VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 218
Query: 208 VEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ D + SVLSA + L +S+H KA E + V +AL+DMY K ++ A
Sbjct: 219 LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 278
Query: 267 EIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
P N+V ++I GY + AL + E+ E PN T ++ C
Sbjct: 279 SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE--PNEFTFSSMIKGC 336
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +E+G ++ ++ +K + + + +VD+ G+ GL+ + ++ E+ R I+
Sbjct: 337 AMQALLEQGAQL-HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA- 394
Query: 386 WGALLNACRVYG 397
W A++N +G
Sbjct: 395 WNAVINVFAQHG 406
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 10/276 (3%)
Query: 109 PDLIT---FCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGL 164
PD T + L +C L+ GR LH LV SG + + N L+ Y C ++
Sbjct: 15 PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A +F + +N VSW +++ QN + F RR GV P F +SS A A
Sbjct: 75 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 134
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ G +H V V+ + +FV S L DMY KCG + +A F++MP+++ V W A+
Sbjct: 135 LGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM 194
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM--KIFYSMT 342
I GYA G + A+ SF +M +V VLSA +G ++ G K +
Sbjct: 195 IDGYAKNGSLEAAVLSFRDMKREGLVGADQHV-FCSVLSA---SGGLKDGWLSKSIHCCV 250
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
K G + ++D+ ++ V+ A ++K P
Sbjct: 251 TKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 286
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/530 (41%), Positives = 328/530 (61%), Gaps = 12/530 (2%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI--DAFINLRRTGG---EPDLITFCA 116
D K+F+ MPE++L +WN ++ G +N + + +R GG +PD T +
Sbjct: 251 DSVRKIFEMMPEKDLVSWNT-----IIAGNARNGLYGETLTMVREMGGANLKPDSFTLSS 305
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L ++ + G+++HG +R G D V V + L+D Y KC V + VF + +++
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERD 365
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S++ VQN + G + F ++PK + SS++ ACA + L LG+ +H
Sbjct: 366 GISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 425
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ + NIF+ S+LVDMY KCG+I+ A F++M R++V W A+I G A GHA
Sbjct: 426 YITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALD 485
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ FE+M + E PNYV + VL+ACS AG V++ K F SMTL +GI PG EHYA
Sbjct: 486 AIELFEQMKTEGIE--PNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAA 543
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
V DLLGRAG ++ AY+ I MP+ PT SVW LL+ACRV+ ++ A+ + ++DP +
Sbjct: 544 VSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKN 603
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+G ++LL+N+++A RW+EA R ++ GI+K CSWI V+N+++ F A D SH
Sbjct: 604 TGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCY 663
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+I+ + L E M+ GY+PDT+ +DVEEE+K V HSE++A+ FG+I P G
Sbjct: 664 EKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTT 723
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+TKNLR+C DCH+A KFIS IVGRE++VRDN+RFH F +G CSC DYW
Sbjct: 724 IRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 157/325 (48%), Gaps = 4/325 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT + + GK++H +++ G +V+V S DMY+K D+
Sbjct: 296 LKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSY 355
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F + ER+ +WN+ I+ V G + F + +P +F + + AC+ +
Sbjct: 356 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLT 415
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+QLHG++ R+GFD N+ + + LVD Y KC + A+ +FD + ++ VSW +M++
Sbjct: 416 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIM 475
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVAVKACV 243
+ + ++F + EG+EP +VL+AC+ AGL E + +++ + +
Sbjct: 476 GCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSH-AGLVDEAWKYFNSMTLDFGI 534
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ +A+ D+ G+ G +++A MP W ++ + DMA
Sbjct: 535 APGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVAN 594
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSR 327
+ + + Y+ L + SA R
Sbjct: 595 RILEVDPKNTGAYILLANIYSAARR 619
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 33/374 (8%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+QLHA LK Q + +YS L D+ ++F+ + W + I
Sbjct: 27 AQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTS 85
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P ++ +FI + +G PD F + L AC+ L LG LHG+++R G D ++
Sbjct: 86 HGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYT 145
Query: 149 CNGLVDFYGKC--------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
N L++ Y K +G ++V+ + V S+LV G Q
Sbjct: 146 GNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLV----------GNQ-- 193
Query: 201 LTARREGVEPKDFMIS-SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
+ +E ++ +S A++ ++ ++AC +G + D+
Sbjct: 194 -GRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEAC-----NLGQQIKDI-SH 246
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
S+ F MPE++LV WN II G A G L+ EM + P+ TL
Sbjct: 247 SMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLK--PDSFTLS 304
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
VL + + KG +I + +++ G+ + ++D+ + V +Y + +
Sbjct: 305 SVLPLIAENVDISKGKEI-HGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE 363
Query: 380 RPTISVWGALLNAC 393
R IS W +++ C
Sbjct: 364 RDGIS-WNSIIAGC 376
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/615 (39%), Positives = 350/615 (56%), Gaps = 37/615 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS--------- 56
+ PN TFP LFK+ + GKQLHA ALK + V S MY+
Sbjct: 127 VQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFAR 186
Query: 57 ----KTGLKD------------------DADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
K+ L+D DA ++FDE+P +++ +WNA IS V GR +
Sbjct: 187 LVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEE 246
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
AI F ++ P+ T L+AC +LG+ + ++ +GF N+ + N L+D
Sbjct: 247 AIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALID 306
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSML--VVYVQNYEEENGCQMFLTARREGVEPKD 212
Y KC E +A+ +FDGI +K+ +SW +M+ Y+ YEE +F R V+P D
Sbjct: 307 MYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEE--ALALFEVMLRSNVKPND 364
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACV-EGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+L ACA + L+LG+ VHA K N + ++L+DMY KCG I+ AE F
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
M RNL WNA++ G+A GHA+ AL+ F EM + + P+ +T V VLSAC++AG V
Sbjct: 425 SMHSRNLASWNAMLSGFAMHGHAERALALFSEMVN-KGLFRPDDITFVGVLSACTQAGLV 483
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G + F SM YGI P +HY C++DLL RA + A ++K M M P ++WG+LL+
Sbjct: 484 DLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLS 543
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
AC+ +G+ E G A+ LF+L+P ++G VLLSN++A GRW++ +R + D G+KK
Sbjct: 544 ACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKV 603
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
GC+ I + +H F D H I ML ++ + ++ G++P+T+ LYD++EE K
Sbjct: 604 PGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWK 663
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSEK+A++FGLI PG IRI KNLR+CG+CHSA K IS I RE+I RD NR
Sbjct: 664 EGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNR 723
Query: 572 FHRFWDGYCSCSDYW 586
FH F DG+CSC+D W
Sbjct: 724 FHHFKDGFCSCNDCW 738
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 182/409 (44%), Gaps = 39/409 (9%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLKDDADKMFDEMPER---NLATWNAY 82
T KQ+H+L +K+G + VFV F S +G A +F+E + N+ WN+
Sbjct: 43 TFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSL 102
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
I L P +++ F + G +P+ TF +C+ G+QLH ++
Sbjct: 103 IRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLAL 162
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID-------- 174
N V ++ Y E+ A++VFD G +D
Sbjct: 163 HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDE 222
Query: 175 ---KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
K+ VSW +M+ YVQ+ E F + V P + VLSAC ELG
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ + + N+ + +AL+DMY KCG A F+ + E++++ WN +IGGY++
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ AL+ FE M +R PN VT + +L AC+ GA++ G + + A
Sbjct: 343 SLYEEALALFEVM--LRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNA 400
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++D+ + G ++ A + + M R ++ W A+L+ ++G E
Sbjct: 401 SLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAE 448
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 148/348 (42%), Gaps = 12/348 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN T + A GK + + +G ++ + + DMY K G
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD + E+++ +WN I + A+ F + R+ +P+ +TF L+A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373
Query: 121 CSDCSLLQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ L LG+ +H ++ ++ + N S+ L+D Y KC + A+ VF + +N S
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +ML + + E +F +G+ P D VLSAC + ++LG
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493
Query: 239 VKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
++ + + ++D+ + ++AEI M E + W +++ G +
Sbjct: 494 IQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEF 553
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV--------EKGMK 336
E + + E +V L + + R V +KGMK
Sbjct: 554 GEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMK 601
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 124/308 (40%), Gaps = 36/308 (11%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAKVVFDGIID 174
+LN C + +Q+H ++++G + V V + L+ F ++ A +F+
Sbjct: 31 YLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 175 K---NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
N W S++ Y + + +F GV+P + +C + G
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEG 150
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +HA A+K + N V ++++ MY G + A + F+K R+ V + A+I GY Q
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 292 GHADMALSSFEEM----------------TSMRCE-------------AVPNYVTLVCVL 322
G D A F+E+ S R E +PN T+V VL
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SAC + E G K S G + ++D+ + G D A E+ + +
Sbjct: 271 SACGHTRSGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDV 329
Query: 383 ISVWGALL 390
IS W ++
Sbjct: 330 IS-WNTMI 336
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/592 (41%), Positives = 359/592 (60%), Gaps = 12/592 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR ++P F +A++AL P+ G QLH + ++ G ++FV + DMYSK GL
Sbjct: 32 MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGL 91
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLN 119
+A ++FD+MP+++ W A I G + A+ +F +++R G D FC+ L+
Sbjct: 92 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 151
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---N 176
A L + +H + ++GF+ V+V N L+D Y K +V A V ID N
Sbjct: 152 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK--IDPGGWN 209
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VS SM+ Y++ E +++ RR+GVEP +F SS++ CA A LE G +HA
Sbjct: 210 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 269
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + + FVGS LVDMYGKCG I + FN++ R + WNA+I +A GH
Sbjct: 270 QVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGRE 329
Query: 297 ALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ +F+ M + +R PN++ V +L+ACS AG V++G+K FYSM +GI+P EHY
Sbjct: 330 AIQAFDRMIYSGIR----PNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHY 385
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
+C++D GRAG +D AY+ I EMP++P W +LL ACR+ G ELG +AA NL KL+P
Sbjct: 386 SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEP 445
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++G HV LS ++A+ G+WE+ VRK M+D IKK G SW+ + H+F ++D SH
Sbjct: 446 GNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHP 505
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ +I L +L +K GYIPDT+F ++E+ K + +HSE+IA+AF LI++P
Sbjct: 506 QQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPAT 565
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI + KNLRIC DCH+AFKFI + R++IVRDN+RFH F +G CSC DYW
Sbjct: 566 KPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 6/329 (1%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
MP RN +W +S +A+ AF +RR G P + A + G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
QLH VR GFD + V + L D Y KC + A VFD + K+ V+W +M+ Y +N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 191 YEEENGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
E F +REG+ D + SVLSA + L +S+H KA E + V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+AL+DMY K ++ A P N+V ++I GY + AL + E+
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E PN T ++ C+ +E+G ++ ++ +K + + + +VD+ G+ GL+
Sbjct: 241 VE--PNEFTFSSMIKGCAMQALLEQGAQL-HAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++ E+ R I+ W A++N +G
Sbjct: 298 LSMQLFNEIEYRTDIA-WNAVINVFAQHG 325
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/622 (37%), Positives = 351/622 (56%), Gaps = 38/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
M E + PN T A + L + G+++H +K ++ D+ VG S D Y+K
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF-- 117
+ A + F + + +L +WNA ++ L G + AI+ ++ G EPD+IT+
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 118 ---------------------------------LNACSDCSLLQLGRQLHGFLVRSGFDG 144
L AC L+LG+++HG+++R+ +
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ V + L+ Y C+ + +A VF + ++ V W S++ Q+ N +
Sbjct: 533 STGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 592
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
VE + S L AC+++A L G+ +H ++ ++ F+ ++L+DMYG+CGSIQ
Sbjct: 593 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 652
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ F+ MP+R+LV WN +I Y G A++ F++ +M + PN++T +LSA
Sbjct: 653 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK--PNHITFTNLLSA 710
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G +E+G K F M +Y + P E YAC+VDLL RAG + E I++MP P +
Sbjct: 711 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 770
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VWG+LL ACR++ P+L AA LF+L+P SGN+VL++N+++A GRWE+A +R MK
Sbjct: 771 VWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMK 830
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
+ G+ K GCSWI VK ++H F DTSH +I A + L ++K GY+PDTNF L
Sbjct: 831 ERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQ 890
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DV+E+EK + HSEKIALAFGLI+ G P+RI KNLR+CGDCHSA KFIS + R++
Sbjct: 891 DVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDI 950
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
I+RDN RFH F DG CSC DYW
Sbjct: 951 IMRDNYRFHHFVDGVCSCGDYW 972
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 209/440 (47%), Gaps = 62/440 (14%)
Query: 55 YSKTGLKDDADKMFDEMP-----ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
Y+++G ++A K F EM + N+ +W A I+ + G A+ F + G +P
Sbjct: 301 YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
+ IT + ++AC++ SLL+ GR++HG+ ++ D ++ V N LVD+Y KC V +A+
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE------------------- 209
F I + VSW +ML Y E ++ + +G+E
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480
Query: 210 ----------------PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
P IS L+AC ++ L+LG+ +H ++ +E + VGSAL
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL 540
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+ MY C S++ A F+++ R++V WN+II A G + AL EM E
Sbjct: 541 ISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV-- 598
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
N VT+V L ACS+ A+ +G +I + ++ G+ ++D+ GR G + ++ I
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEI-HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSNMF 427
MP R +S W +++ VYG G + A NLF+ L P NH+ +N+
Sbjct: 658 FDLMPQRDLVS-WNVMIS---VYGMHGFG-MDAVNLFQQFRTMGLKP----NHITFTNLL 708
Query: 428 AA---TGRWEEADLVRKEMK 444
+A +G EE K MK
Sbjct: 709 SACSHSGLIEEGWKYFKMMK 728
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 70/434 (16%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ F FP +FKA S L GK ++ L G + V S DM+ K G
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + F+E+ +++ WN +S G K A+ +++ +G +PD +T+ A ++
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + + + + G GL DF N VSW
Sbjct: 301 YAQSGQFE---EASKYFLEMG---------GLKDF------------------KPNVVSW 330
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ QN + +F EGV+P I+S +SAC ++ L GR +H +K
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Query: 241 A-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA---------- 289
++ ++ VG++LVD Y KC S++ A F + + +LV WNA++ GYA
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450
Query: 290 -------------------------HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
G AL F+ M SM + PN T+ L+A
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD--PNTTTISGALAA 508
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C + ++ G +I + L+ I+ + ++ + ++ A + E+ R +
Sbjct: 509 CGQVRNLKLGKEI-HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVV- 566
Query: 385 VWGALLNACRVYGK 398
VW ++++AC G+
Sbjct: 567 VWNSIISACAQSGR 580
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 186/471 (39%), Gaps = 88/471 (18%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
ECI + + + L+ G Q+HA + +G F+G ++Y +TG +D
Sbjct: 87 ECIE----IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +MFD+M ERN+ +W A + G + I F + G PD F ACS+
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 202
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
++G+ ++ +++ GF+GN V ++D + KC + +A+ F+ I K+ W M
Sbjct: 203 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 262
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y E + + + GV+P ++++S
Sbjct: 263 VSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG---------------------- 300
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-----ERNLVCWNAIIGGYAHQGHADMAL 298
Y + G ++A F +M + N+V W A+I G G+ AL
Sbjct: 301 -------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKI-------------------- 337
S F +M E V PN +T+ +SAC+ + G +I
Sbjct: 348 SVFRKMV---LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 338 --FYS-------MTLKYGIKPGAEHYACVVDLLGRA--GLVDRAYEIIKEMPMR---PTI 383
+Y+ K+G+ + + L G A G + A E++ EM + P I
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 384 SVWGALLNACRVY--GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
W L+ Y GK L + +DPN + +S AA G+
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTT----TISGALAACGQ 511
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 172/389 (44%), Gaps = 21/389 (5%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ + L C L+LG Q+H LV +G D + + L++ Y + V A+ +FD +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++N SW +++ +Y + E ++F EGV P F+ V AC+ + +G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
V+ + EGN V +++DM+ KCG + A F ++ +++ WN ++ GY +G
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 294 ADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL ++ M+ V P+ VT ++S +++G E+ K F M KP
Sbjct: 272 FKKALKC---ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPM---RPTISVWGALLNACRVYGKPELGRIAADNL 409
+ ++ + G A + ++M + +P + ++AC GR
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 410 FKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAK 469
K++ DS + ++ +++ + ++ R++ IK+ SW N + A
Sbjct: 389 IKVEELDS-DLLVGNSLVDYYAKCRSVEVARRKFG--MIKQTDLVSW----NAMLAGYAL 441
Query: 470 DTSHERNTEIQAMLTKLREEMKAAGYIPD 498
SHE E L EMK G PD
Sbjct: 442 RGSHEEAIE-------LLSEMKFQGIEPD 463
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/581 (39%), Positives = 338/581 (58%), Gaps = 7/581 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A + L G+ + A +G DVFV S +Y++ G DA K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP R+ TW+ ++ V G+P +AI + +R G + D + + AC+ +
Sbjct: 166 FDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG L+R G +V LVD Y K + +A VF ++ +NDVSW +M+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN + + ++F + G++P + S L AC+ I L+LGRSVH V+ + N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--T 305
+G+A +DMY KCGS+ A++ FN + +R+L+ WNA+I G AL+ F+EM T
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
MR P++ T +LSA S +G VE+G F M + I P +HY C+VDLL R+G
Sbjct: 405 GMR----PDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSG 460
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
LV+ A +++ M PT+++W ALL+ C K ELG ADN+ +L P+D G L+SN
Sbjct: 461 LVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSN 520
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++AAT +W++ VRK MKD G KK GCS I ++ H F +D SH + EI + + K
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAK 580
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L EM+ GYIP T F +D+EEE K ++ +HSEK+A+AFGL+ PG + I KNLR+
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRV 640
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH A K+IS I RE++VRD RFH F DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 199/453 (43%), Gaps = 41/453 (9%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-LKDDADKMFDEMPERNLATWNAYISNA 86
T +LHAL + S + A Y++ G L + ++A WNA I+
Sbjct: 26 TLARLHALLIVSSSATHTLISSLA-AAYARAGDLAAAESTLTATAASSSIAAWNAIIAAH 84
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G P +A+ F L PD TF L+AC+ L+ G + +G+ +V
Sbjct: 85 SRRGSPASALRVFRAL-PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC+ L+ Y + +G A VFD + ++ V+W +M+ +V + + QM+ R +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV+ + ++ V+ AC + +G SVH ++ + ++ ++LVDMY K G + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M RN V W+A+I G+A G +D AL F M + + P+ LV L ACS
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQ--PDSGALVSALLACS 321
Query: 327 RAGAVEKGMKIF-----------------YSMTLKYGIKPGAEHYACVV---DLL----- 361
G ++ G + M K G A+ ++ DL+
Sbjct: 322 NIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381
Query: 362 -------GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI---AADNLFK 411
GR ++ + E MRP + + +LL+A G E G++ N FK
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFK 441
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ P + ++V L ++ A +G EEA + MK
Sbjct: 442 ITPAEK-HYVCLVDLLARSGLVEEASDLLTSMK 473
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 13/294 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + ++ + +A +A G +H L+ G DV S DMY+K GL
Sbjct: 200 MREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGL 259
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M RN +W+A IS G+ A+ F N++ +G +PD + L A
Sbjct: 260 LDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLA 319
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ L+LGR +HGF+VR FD N + +D Y KC + A+++F+ I D++ + W
Sbjct: 320 CSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILW 378
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + ++ +F G+ P +S+LSA + +E G+
Sbjct: 379 NAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWF----- 433
Query: 241 ACVEGNIFVGSA------LVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGG 287
C+ + + A LVD+ + G +++A M E + W A++ G
Sbjct: 434 GCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/532 (42%), Positives = 328/532 (61%), Gaps = 11/532 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ GL +A ++F+E+P R++ W A +S V G A F + E + +++
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSW 311
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + ++ R+L + N S N +V Y +C + AK++FD +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +SW +M+ Y Q+ + E +F+ +R+G ++ LS+CA IA LELG+ +
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VKA + G+AL+ MYGKCGSI++A F + E+++V WN +I GYA G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL+ FE SM+ P+ VTLV VLSACS G V+KGM+ F SM YGI A+HY
Sbjct: 488 KEALALFE---SMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHY 544
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG +D A ++K MP P + WGALL A R++G ELG AA+ +F+++P
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEP 604
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SG +VLLSN++AA+GRW E +R +M+D G+KK G SW+ ++N+ HIF D SH
Sbjct: 605 DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHP 664
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I A L +L E+K G++ T L+DVEEEEK + +HSEK+A+AFG+++IPPG
Sbjct: 665 EAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPG 724
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCH+A K IS I R++IVRD+NRFH F +G CSC DYW
Sbjct: 725 RPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 147/343 (42%), Gaps = 67/343 (19%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A K+F++MP+R+L +WN +S V G A F + E D++++ A L
Sbjct: 108 DCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAML--- 160
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
SGF NG V+ A+ +FD ++ KN++SW
Sbjct: 161 ------------------SGF-----AQNGFVE---------EARKIFDQMLVKNEISWN 188
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS---VLSACARIAGLELGRSV-HAV 237
+L YVQN E+ ARR D+ I S ++ R L+ RS+ +
Sbjct: 189 GLLSAYVQNGRIED-------ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
V+ + NI + Y + G + +A F ++P R++ W A++ G+ G D A
Sbjct: 242 PVRDKISWNIMITG-----YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
FEEM N V+ +++ ++ +EK ++F M + + +
Sbjct: 297 TRIFEEMPE------KNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTM 345
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
V + G +D+A + EMP R IS W A+++ G+ E
Sbjct: 346 VTGYAQCGNIDQAKILFDEMPQRDCIS-WAAMISGYAQSGQSE 387
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 35/280 (12%)
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA----CARIAG 227
I+D + V W + Y++ + E+ +F RR + MIS LS CAR
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR--- 111
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+ + + + N+ + Y K G++ A FN+MPE+++V WNA++ G
Sbjct: 112 ----KVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSG 162
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+A G + A F++M V N ++ +LSA + G +E ++F S + + I
Sbjct: 163 FAQNGFVEEARKIFDQML------VKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEI 215
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-A 406
+ C++ R +D A + MP+R IS W ++ G + G ++ A
Sbjct: 216 VS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKIS-WNIMIT-----GYAQNGLLSEA 265
Query: 407 DNLFKLDP-NDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
LF+ P D + + F G +EA + +EM +
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ N C + + + GKQLH +K+G G + MY K G
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F+++ E+++ +WN I+ G K A+ F +++ T +PD +T L+A
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSA 514
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA 165
CS L+ G + + ++ G N ++D G+ + A
Sbjct: 515 CSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 343/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN FT+P + + +++ G+Q+H +K+G +V+V DMY+K G
Sbjct: 406 MQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGK 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + + E ++ +W A IS A+ F + G + D I F + ++A
Sbjct: 466 LDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISA 525
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L GRQ+H SG+ ++S+ N LV Y +C + A + F+ I K+ +SW
Sbjct: 526 CAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISW 585
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ E+ ++F R +E F S +SA A IA ++ G+ +HA+ +K
Sbjct: 586 NGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIK 645
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I V +AL+ Y KCGSI+DA F +MPE+N V WNA+I GY+ G+ + A++
Sbjct: 646 RGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNL 705
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M + +PN+VT V VLSACS G V KG+ F SM+ ++G+ P HYACVVDL
Sbjct: 706 FEKMK--QVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDL 763
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
+ RAG + RA + I+EMP+ P ++W LL+AC V+ E+G AA +L +L+P DS +
Sbjct: 764 ISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATY 823
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+A +G+W+ D R+ M++ G+KK G SWI VKN +H F D H +I
Sbjct: 824 VLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIY 883
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L ++ GY D L DVE+E+K V HSEK+A+ FGL+++ VPI +
Sbjct: 884 EFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVM 943
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHS KF+S I R +IVRD RFH F G CSC DYW
Sbjct: 944 KNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 210/433 (48%), Gaps = 14/433 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ + P+ T L A ++ G+QLH+ +K+G D+ V + D+Y
Sbjct: 305 MKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSD 364
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR---TGGEPDLITFCAF 117
A +MF N+ WN + V G+ N ++F R+ G P+ T+ +
Sbjct: 365 IKTAHEMFLTAQTENVVLWNVML---VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSI 421
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L LG Q+H ++++GF NV VC+ L+D Y K ++ A V+ + + +
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDV 481
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +++ Y Q+ + F G++ + SS +SACA I L GR +HA
Sbjct: 482 VSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 541
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ + ++ +G+ALV +Y +CG I++A + F K+ ++ + WN +I G+A G+ + A
Sbjct: 542 SYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDA 601
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F +M + EA ++ T +SA + +++G +I ++M +K G E +
Sbjct: 602 LKVFAQMNRAKLEA--SFFTFGSAVSAAANIANIKQGKQI-HAMIIKRGFDSDIEVSNAL 658
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-ND 416
+ + G ++ A EMP + +S W A++ Y + G A + K+ +
Sbjct: 659 ITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITG---YSQHGYGNEAVNLFEKMKQVGE 714
Query: 417 SGNHVLLSNMFAA 429
NHV + +A
Sbjct: 715 MPNHVTFVGVLSA 727
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 189/391 (48%), Gaps = 4/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P + F + + + + G+QLHAL K G + +V + +YS+
Sbjct: 204 MHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPN 263
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+K+F +M ++ ++N+ IS G A++ F ++R +PD +T + L+A
Sbjct: 264 FVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSA 323
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G QLH +++++G ++ V L+D Y C+++ A +F +N V W
Sbjct: 324 CASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLW 383
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV + + ++F + +G+ P F S+L C + L+LG +H +K
Sbjct: 384 NVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIK 443
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N++V S L+DMY K G + A + + E ++V W A+I GYA AL
Sbjct: 444 TGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKH 503
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + ++ + + +SAC+ A+ +G +I ++ + G +V L
Sbjct: 504 FKEMLNRGIQS--DNIGFSSAISACAGIQALNQGRQI-HAQSYVSGYSEDLSIGNALVSL 560
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G + AY +++ + +IS W L++
Sbjct: 561 YARCGRIKEAYLEFEKIDAKDSIS-WNGLIS 590
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 187/393 (47%), Gaps = 7/393 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E +SP + +F + +A S I + +Q+HA + G + + +Y+K G
Sbjct: 102 MIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNG 161
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
L A K+FD + ++ +W A IS G + AI F + G P F + L+
Sbjct: 162 LIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLS 221
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ L +G QLH + + G VCN LV Y + A+ VF + K++VS
Sbjct: 222 GCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ Q + ++F +R+ ++P ++S+LSACA L G +H+ +
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + ++ V AL+D+Y C I+ A F N+V WN ++ + G D
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAF---GKLDNLSE 398
Query: 300 SFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
SF M+ + +PN T +L C+ GA++ G +I ++ +K G + + ++
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQI-HTQVIKTGFQFNVYVCSVLI 457
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
D+ + G +D A+ I++ + +S W AL++
Sbjct: 458 DMYAKHGKLDTAHVILRTLTEDDVVS-WTALIS 489
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 179/367 (48%), Gaps = 5/367 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
V K+LH LK G ++ + D+Y G D K+F++MP R++ +W+ IS
Sbjct: 27 VECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGF 86
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL-LQLGRQLHGFLVRSGFDGN 145
+ +D F + P I+F + L ACS + ++ Q+H ++ G +
Sbjct: 87 MEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCS 146
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ N L+ Y K + A+ VFD + K+ VSW +M+ + QN EE +F
Sbjct: 147 PIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHT 206
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G+ P ++ SSVLS C +I ++G +HA+ K +V +ALV +Y + +
Sbjct: 207 AGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVS 266
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
AE F+KM ++ V +N++I G A QG +D AL F +M R P+ VT+ +LSAC
Sbjct: 267 AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK--RDYLKPDCVTVASLLSAC 324
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ GA+ KG ++ +S +K GI ++DL + A+E+ + +
Sbjct: 325 ASNGALCKGEQL-HSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVV-L 382
Query: 386 WGALLNA 392
W +L A
Sbjct: 383 WNVMLVA 389
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T+ L+ C + L ++LHG +++ GF +CN LVD Y ++ VF+ +
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA--RIAGLEL 230
+++ SW ++ +++ +F E V P + +SVL AC+ RI G+
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRI-GIRY 130
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
+HA + + + + + L+ +Y K G I A F+ + ++ V W A+I G++
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G+ + A+ F EM + P YV VLS C++ + G ++ +++ KYG
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTP-YV-FSSVLSGCTKIKLFDVGEQL-HALVFKYG--SS 245
Query: 351 AEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
E Y C +V L R A ++ +M + +S
Sbjct: 246 LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/560 (40%), Positives = 324/560 (57%), Gaps = 2/560 (0%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ GK H LA+ G + D ++Y+K G D A +FD M R++ +WN I+
Sbjct: 74 LVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGY 133
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G A+ F + R G T + + AC+ + +QLH ++ D N
Sbjct: 134 THSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNS 193
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V ++D Y KCN + A VF+ + ++ V+W S+ YVQN E +F A+RE
Sbjct: 194 FVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQRE 253
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GVE +F +S++LSACA +A G +HAV +K GN FV ++LVD+Y +CG I+ A
Sbjct: 254 GVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKA 313
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M +N+V WNA+I ++ H+ A+ FE+M + PN VT + VLS CS
Sbjct: 314 YALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQL--GIFPNEVTYLSVLSVCS 371
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VEKG F + ++P HY+C+VD+LGR+G D A+E++ +MP PT S+W
Sbjct: 372 HAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMW 431
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
G+LL +CR Y L RIAA+ LF+L+P++ GNHVLLSN++AA+G WE + RK +KD
Sbjct: 432 GSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDS 491
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G KK G SWI K ++H+F + H R T+I L ++ EM+ L+DV
Sbjct: 492 GAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDV 551
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
E+K + HHSEK+AL+FGLI++P +PI I KNLRICGDCHS K + I R VIV
Sbjct: 552 HAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIV 611
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH F DG CSC D+W
Sbjct: 612 RDTNRFHHFKDGSCSCGDFW 631
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 2/326 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE ++FT A +A + KQLH +ALK + FVG + D+Y+K +
Sbjct: 149 MHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNM 208
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F++MPER L TW++ + V G + A+ F +R G E T A L+A
Sbjct: 209 IKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSA 268
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +L G QLH +++ GF GN V LVD Y +C ++ A +F + KN V W
Sbjct: 269 CASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIW 328
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + ++ +F ++ G+ P + SVLS C+ +E GR ++ +
Sbjct: 329 NAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMS 388
Query: 241 -ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
VE N+ S +VD+ G+ G +A NKMP E W +++G + + +A
Sbjct: 389 DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLAR 448
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ E++ + + N+V L V +A
Sbjct: 449 IAAEQLFQLEPDNGGNHVLLSNVYAA 474
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 4/273 (1%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L +G+ HG + G + CN L++ Y KC A++VFD + ++
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ Y + E+ ++F REG +F +SS + ACA + + +H +
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+K ++ N FVG+A++D+Y KC I+DA F KMPER LV W+++ GY G + A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F + R TL +LSAC+ +G+++ +++ LK G A +
Sbjct: 244 LHLFR--CAQREGVELTEFTLSAILSACASLALKIEGIQL-HAVILKCGFHGNFFVAASL 300
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VD+ R G +++AY + M + + +W A++
Sbjct: 301 VDVYARCGQIEKAYALFAYMEHKNVV-IWNAMI 332
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
IS L CA+ L +G+S H +A+ + + + L+++Y KCG A + F+ M
Sbjct: 60 ISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMH 119
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R++V WN +I GY H G AL F M R + TL + AC+ A+ +
Sbjct: 120 VRSIVSWNTMIAGYTHSGEDVQALKLFSRMH--REGTHMSEFTLSSTICACAAKYAINE- 176
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
K +++ LK + + ++D+ + ++ A + ++MP R T+ W +L
Sbjct: 177 CKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPER-TLVTWSSLF 231
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/532 (42%), Positives = 328/532 (61%), Gaps = 11/532 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ GL +A ++F+E+P R++ W A +S V G A F + E + +++
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSW 311
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + ++ R+L + N S N +V Y +C + AK++FD +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +SW +M+ Y Q+ + E +F+ +R+G ++ LS+CA IA LELG+ +
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VKA + G+AL+ MYGKCGSI++A F + E+++V WN +I GYA G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL+ FE SM+ P+ VTLV VLSACS G V+KGM+ F SM YGI A+HY
Sbjct: 488 KEALALFE---SMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHY 544
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG +D A ++K MP P + WGALL A R++G ELG AA+ +F+++P
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEP 604
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SG +VLLSN++AA+GRW E +R +M+D G+KK G SW+ ++N+ HIF D SH
Sbjct: 605 DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHP 664
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I A L +L E+K G++ T L+DVEEEEK + +HSEK+A+AFG+++IPPG
Sbjct: 665 EAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPG 724
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCH+A K IS I R++IVRD+NRFH F +G CSC DYW
Sbjct: 725 RPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 147/343 (42%), Gaps = 67/343 (19%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A K+F++MP+R+L +WN +S V G A F + E D++++ A L
Sbjct: 108 DCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAML--- 160
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
SGF NG V+ A+ +FD ++ KN++SW
Sbjct: 161 ------------------SGF-----AQNGFVE---------EARKIFDQMLVKNEISWN 188
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS---VLSACARIAGLELGRSV-HAV 237
+L YVQN E+ ARR D+ I S ++ R L+ RS+ +
Sbjct: 189 GLLSAYVQNGRIED-------ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
V+ + NI + Y + G + +A F ++P R++ W A++ G+ G D A
Sbjct: 242 PVRDKISWNIMITG-----YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
FEEM N V+ +++ ++ +EK ++F M + + +
Sbjct: 297 TRIFEEMPE------KNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-----NTSSWNTM 345
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
V + G +D+A + EMP R IS W A+++ G+ E
Sbjct: 346 VTGYAQCGNIDQAKILFDEMPQRDCIS-WAAMISGYAQSGQSE 387
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 35/280 (12%)
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA----CARIAG 227
I+D + V W + Y++ + E+ +F RR + MIS LS CAR
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR--- 111
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+ + + + N+ + Y K G++ A FN+MPE+++V WNA++ G
Sbjct: 112 ----KVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSG 162
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+A G + A F++M V N ++ +LSA + G +E ++F S + + I
Sbjct: 163 FAQNGFVEEARKIFDQML------VKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEI 215
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-A 406
+ C++ R +D A + MP+R IS W ++ G + G ++ A
Sbjct: 216 VS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKIS-WNIMIT-----GYAQNGLLSEA 265
Query: 407 DNLFKLDP-NDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
LF+ P D + + F G +EA + +EM +
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ N C + + + GKQLH +K+G G + MY K G
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F+++ E+++ +WN I+ G K A+ F +++ T +PD +T L+A
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSA 514
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA 165
CS + G + + ++ G N ++D G+ + A
Sbjct: 515 CSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 352/584 (60%), Gaps = 2/584 (0%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+E I N+ T + A + + K+LH +++ G +D V Y+K G+
Sbjct: 229 QEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLI 288
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A+++F M + + +WNA I G P+ A++ +I + +G PD T + L A +
Sbjct: 289 CAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA 348
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
L+ G+++HGF++R G + + + L+ Y C E A+++FDG+ +K+ VSW +
Sbjct: 349 HLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNA 408
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ Y QN E+ +F +G +P D + SVL AC++ + L LG+ H A+KA
Sbjct: 409 MISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKAL 468
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++FV + +DMY K G I+++ F+ + ++L WNAII Y G + ++ FE
Sbjct: 469 LMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFE 528
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + +P+ T + +L+ CS AG VE+G+K F M +GI+P EHYACV+D+LG
Sbjct: 529 RMR--KVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLG 586
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RAG +D A ++ EMP +P VW +LL+ CR +G+ E+G+I A+ L +L+P + N+V
Sbjct: 587 RAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVS 646
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A +GRW++ VR+ +KD+G++K AGCSWI + ++H F A D ++ E+
Sbjct: 647 LSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMT 706
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
KL ++M GY P+T+ L+DV+EE+K+ ++ HSEK+A+ FGL+ G +RI KN
Sbjct: 707 WRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKN 766
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LRIC DCH+A KF+S + GRE+I+RDN RFH F DG CSC DYW
Sbjct: 767 LRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 195/397 (49%), Gaps = 7/397 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+ ++FTFPC+ KA + G+ +H + +K G + DVFVG + MY K G D A K
Sbjct: 28 NADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVK 87
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR--RTGGEPDLITFCAFLNACSDC 124
+F MP RNL +WN+ IS G K+ D + + G PD+ T L C+
Sbjct: 88 VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+Q+G ++HG V+ G +V V N LVD Y KC + A+++FD KN VSW +M+
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207
Query: 185 -VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ + Y E +E +E + + ++L AC I+ L + +H +++
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGF 267
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + V + V Y KCG + AE F M + + WNA+IGG A G AL+ + +
Sbjct: 268 QYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQ 327
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
MT VP++ T+ +L A + ++ G ++ + L++G++ + ++ L
Sbjct: 328 MT--YSGLVPDWFTIGSLLLASAHLKSLRYGKEV-HGFVLRHGLEIDSFIGISLLSLYIH 384
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G A + M + ++S W A+++ G PE
Sbjct: 385 CGESSSARLLFDGMEEKSSVS-WNAMISGYSQNGLPE 420
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 5/373 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G ++H LA+K G DV V S DMYSK G +A +FD+ +N +WN I
Sbjct: 153 GIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCT 212
Query: 89 GGRPKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A + F ++ + E + +T L AC + S L+ ++LHG+ +R GF +
Sbjct: 213 KGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL 272
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V NG V Y KC + A+ VF + K SW +++ QN + +++ G
Sbjct: 273 VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSG 332
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P F I S+L A A + L G+ VH ++ +E + F+G +L+ +Y CG A
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSAR 392
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ F+ M E++ V WNA+I GY+ G + AL F ++ S + P+ + +V VL ACS+
Sbjct: 393 LLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQ--PSDIAVVSVLGACSQ 450
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+ G K + LK + +D+ ++G + + + + + S W
Sbjct: 451 QSALRLG-KETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLAS-WN 508
Query: 388 ALLNACRVYGKPE 400
A++ A V+G E
Sbjct: 509 AIIAAYGVHGDGE 521
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 6/309 (1%)
Query: 94 NAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
+AID F+ L T D TF + AC+ LG +HG +++ G +V V N L
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEP 210
+ YGK V A VF + +N VSW S++ + +N ++ M + A EG+ P
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ +VL CAR +++G +H +AVK + ++ V ++LVDMY KCG + +A++ F
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+K +N V WN +IGG +G+ A + F EM M+ + N VT++ +L AC
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREM-QMQEDIEVNEVTVLNILPACLEISQ 251
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ + +K + ++++G + V + G++ A + M + T++ W AL+
Sbjct: 252 L-RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK-TVNSWNALI 309
Query: 391 NACRVYGKP 399
C G P
Sbjct: 310 GGCAQNGDP 318
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/571 (39%), Positives = 334/571 (58%), Gaps = 2/571 (0%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
+ K + + + GK HA L G D+ +MYSK G D A ++FDEMP R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
L +WN I + G A+D + ++R G T + L AC+ L + LH
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
F +++ D NV V L+D Y KC + A VF+ + D++ V+W SM YVQN E
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
+F A G++ F++SSV+ ACA +A + G+ ++A+ K+ NIFV S+L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY KCG I+++ F + +RN+V WNA+I G + + + FE+M M PN
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS--PND 367
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
VT V VLSAC G V KG K F MT ++ + P HY+C+VD L RAG + AY++I
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEE 435
++P + S+WG+LL +CR +G EL +AA LF ++P++SGN++LLSNM+AA G+W+E
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDE 487
Query: 436 ADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGY 495
+RK +K+ +KK G SWI +K+++H+F + +H + EI + L ++ +E++ GY
Sbjct: 488 VAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGY 547
Query: 496 IPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKF 555
+T L+ V E K + HHSEK+A GL+ +PP PIRI KNLRICGDCHS K
Sbjct: 548 KVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKL 607
Query: 556 ISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S R+VIVRD NRFH F +G CSC D+W
Sbjct: 608 ASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 206 EGVEPKDF------MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
E KDF + +L CA+ L G++ HA + ++ ++ + L++MY K
Sbjct: 52 EKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSK 111
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTL 318
CGS+ A F++MP R+LV WN +IG G + AL + + M+ E P + T+
Sbjct: 112 CGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEAL---DLLLQMQREGTPFSEFTI 168
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
VL AC+ A+ + ++ ++ +K + ++D+ + GL+ A + + MP
Sbjct: 169 SSVLCACAAKCALSE-CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227
Query: 379 MRPTISVWGAL 389
R ++ W ++
Sbjct: 228 DRSVVT-WSSM 237
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + F + A + L + GKQ++AL KSG ++FV S DMY+K G +++
Sbjct: 262 LKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESY 321
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F ++ +RN+ WNA IS R + F +++ G P+ +TF + L+AC
Sbjct: 322 KVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMG 381
Query: 126 LLQLGRQLHGFLVR 139
L++ G++ + +
Sbjct: 382 LVRKGQKYFDLMTK 395
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 343/587 (58%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ P+DFTF + KA LH G+QLHAL++ +G D VG D YSK
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +FDEMPE + ++N IS+ + + ++ F ++ G + F L+
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ S LQ+GRQLH + + D + V N LVD Y KC A+++F + + VSW
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ YVQ G ++F R + ++VL A A A L LG+ +HA ++
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+F GS LVDMY KCGSI+DA F +MP+RN V WNA+I +A G + A+ +
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ V+++ VL+ACS G VE+G + F +M+ YGI P +HYAC++DL
Sbjct: 541 FAKMIESGLQ--PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDL 598
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGN 419
LGR G A +++ EMP P +W ++LNACR++ L AA+ LF ++ D+
Sbjct: 599 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA 658
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V +SN++AA G WE+ V+K M++ GIKK SW+ V ++IH+F + D +H EI
Sbjct: 659 YVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ +L E++ GY PDT+ + DV+E+ K+ + +HSE++A+AF LI+ P G PI +
Sbjct: 719 VRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVV 778
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+A K IS IV RE+ VRD +RFH F +G CSC DYW
Sbjct: 779 MKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 196/391 (50%), Gaps = 8/391 (2%)
Query: 5 CISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCS--AFDMYSKTGLK 61
C P+ TF L + A+ G Q+HA A+K G + F+ S Y +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +F+E+PE++ T+N I+ G +I F+ +R++G +P TF L A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
LG+QLH V +GF + SV N ++DFY K + V +++FD + + + VS+
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ Y Q + E F + G + ++F +++LS A ++ L++GR +H A+ A
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + VG++LVDMY KC ++AE+ F +P+R V W A+I GY +G L F
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M A + T VL A + ++ G K ++ ++ G + +VD+
Sbjct: 441 TKMRGSNLRA--DQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A ++ +EMP R +S W AL++A
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVS-WNALISA 527
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITF 114
KTG A +FD MP+R + TW + A F + R+ PD +TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGN--VSVCNGLVDFYGKCNEVGLAKVVFDGI 172
L C+D Q+H F V+ GFD N ++V N L+ Y + + LA V+F+ I
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+K+ V++ +++ Y ++ +FL R+ G +P DF S VL A + LG+
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+HA++V + VG+ ++D Y K + + + F++MPE + V +N +I Y+
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ +L F EM M + +LS + +++ G ++ L
Sbjct: 331 QYEASLHFFREMQCMGFDR--RNFPFATMLSIAANLSSLQMGRQLHCQALL--ATADSIL 386
Query: 353 HYA-CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
H +VD+ + + + A I K +P R T+S W AL++
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N N ++ + K +V A+ +FD + D+ V+W ++ Y +N + ++F
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 205 REG--VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF--VGSALVDMYGKC 260
R P +++L C VHA AVK + N F V + L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
+ A + F ++PE++ V +N +I GY G ++ F +M + P+ T
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ--PSDFTFSG 255
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
VL A G ++ +++++ G A ++D + V + EMP
Sbjct: 256 VLKAVVGLHDFALGQQL-HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/600 (38%), Positives = 351/600 (58%), Gaps = 16/600 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
M E + P+ FT + A S L + TGK+LHA ALK+G + + FVG + DMY
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 348
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFL 118
++FD M +R + WNA I+ + A+ FI + + G + T +
Sbjct: 349 QVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVV 408
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC +HGF+V+ G D + V N L+D Y + ++ +AK +F + D++ V
Sbjct: 409 PACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLV 468
Query: 179 SWCSMLVVYVQNYEEENGCQMFLT-----------ARREGVEPKDFMISSVLSACARIAG 227
+W +++ YV + E+ M A R ++P + ++L +CA ++
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L G+ +HA A+K + ++ VGSALVDMY KCG +Q + F+++P RN++ WN I+
Sbjct: 529 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMA 588
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G++ A+ M M PN VT + V +ACS +G V +G+KIFY+M YG+
Sbjct: 589 YGMHGNSQDAIDMLRMM--MVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGV 646
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKPELGRIAA 406
+P ++HYACVVDLLGRAG V AY++I +P W +LL ACR++ E+G IAA
Sbjct: 647 EPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAA 706
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
NL +L+PN + ++VLL+N++++ G W +A VR+ MK G++K GCSWI + +H F
Sbjct: 707 QNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKF 766
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D+SH ++ +++ L L E M+ GYIPDT+ L++VEE+EK + HSEK+A+AF
Sbjct: 767 VAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAF 826
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G++ PG IR+ KNLR+C DCH A KFIS +V RE+I+RD RFH F +G CSC DYW
Sbjct: 827 GILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 196/391 (50%), Gaps = 9/391 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDA 64
I P++F FP L KA + L GKQ+HA K G + V V + ++Y K G
Sbjct: 89 IKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 148
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FD + ERN +WN+ IS+ + + A++AF + EP T + ACS+
Sbjct: 149 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNF 208
Query: 125 SL---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L +G+Q+H + +R G + N + N LV YGK ++ +KV+ ++ V+W
Sbjct: 209 PMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWN 267
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK- 240
++L QN + + EGVEP F ISSVL AC+ + L G+ +HA A+K
Sbjct: 268 TVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKN 327
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N FVGSALVDMY C + F+ M +R + WNA+I GYA + + AL
Sbjct: 328 GSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLL 387
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + N T+ V+ AC R+GA K I + +K G+ ++D+
Sbjct: 388 FIEMEE-SAGLLANSTTMAGVVPACVRSGAFSKKEAI-HGFVVKRGLDRDRFVQNALMDM 445
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G +D A I +M R ++ W ++
Sbjct: 446 YSRLGKIDIAKRIFGKMEDRDLVT-WNTIIT 475
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 16/302 (5%)
Query: 56 SKTGLKDDADKMFDEMPERNLAT------WNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
+ T + DD P + ++ W + + V + A+ +I++ G +P
Sbjct: 32 TPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKP 91
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVV 168
D F A L A +D + LG+Q+H + + G+ +V+V N LV+ Y KC + G V
Sbjct: 92 DNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 151
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA-- 226
FD I ++N VSW S++ + E + F E VEP F + SV AC+
Sbjct: 152 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMP 211
Query: 227 -GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
GL +G+ VHA ++ E N F+ + LV MYGK G + +++ R+LV WN ++
Sbjct: 212 EGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVL 270
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ L + E + M E V P+ T+ VL ACS + G K ++ LK
Sbjct: 271 SSLCQN---EQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTG-KELHAYALK 326
Query: 345 YG 346
G
Sbjct: 327 NG 328
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/546 (41%), Positives = 332/546 (60%), Gaps = 11/546 (2%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ DV + Y + G +A ++FDEMP RN+ +W IS V G+ +D
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQ----VDVARK 223
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
L E + +++ A L + ++ +L + V CN ++ +G+ E
Sbjct: 224 LFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA----VVACNAMILGFGQNGE 279
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
V A+ VFD I +K+D +W +M+ VY + E +F +REGV+ + SVLS
Sbjct: 280 VAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSV 339
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA +A L+ GR VHA VK+ + ++FV S L+ MY KCG + A F++ +++V W
Sbjct: 340 CASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMW 399
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N+II GYA G + AL F EM S + VT V VLSACS G V++G++IF SM
Sbjct: 400 NSIITGYAQHGLVEEALQVFHEMCS--SGMATDGVTFVGVLSACSYTGKVKEGLEIFESM 457
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
KY ++P EHYAC+VDLLGRAGLV+ A ++I++MP+ +WGALL ACR + L
Sbjct: 458 KSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNL 517
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
+AA L +L+P ++G ++LLSN++A+ GRW + +R+ M+ + K GCSWI V+
Sbjct: 518 AEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEK 577
Query: 462 RIHIFQAK-DTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
R+H+F T H + I ML KL ++ AGY PD++F L+DV+EEEK+ +GHHSE
Sbjct: 578 RVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSE 637
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
++A+AFGL+ +P G+PIR+ KNLR+CGDCHSA K I+ I GRE+I+RD NRFH F DG+C
Sbjct: 638 RLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFC 697
Query: 581 SCSDYW 586
SC DYW
Sbjct: 698 SCRDYW 703
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 152/366 (41%), Gaps = 69/366 (18%)
Query: 50 SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
S Y++ G + A ++FDEMP++ + +WN+ ++ RP+ A
Sbjct: 21 SQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREA-------------- 66
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
+L + N NGL+ Y K V A+ F
Sbjct: 67 -------------------------RYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAF 101
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + ++N VSW +M+ YVQ +F + V M+ ++ ++ ++
Sbjct: 102 DTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLI----QVRRID 157
Query: 230 LGRSVHAV-AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
R + + VK ++ + ++ Y + G + +A F++MP RN++ W +I GY
Sbjct: 158 EARGLFDIMPVK-----DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGY 212
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
G D+A FE M N V+ +L ++ G +E+ ++F +M +K +
Sbjct: 213 VQNGQVDVARKLFEVMPE------KNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVV- 265
Query: 349 PGAEHYACVVDLL--GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
AC +L G+ G V +A ++ ++ + W A++ +VY + + A
Sbjct: 266 ------ACNAMILGFGQNGEVAKARQVFDQIREKDD-GTWSAMI---KVYERKGF-EVEA 314
Query: 407 DNLFKL 412
NLF L
Sbjct: 315 LNLFAL 320
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 32/269 (11%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N + Y + ++ A+ VFD + DK VSW SM+ Y QN +F
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLF--------- 70
Query: 210 PKDFMIS-SVLSACARIAGLELGRSVHAV--AVKACVEGNIFVGSALVDMYGKCGSIQDA 266
D M + +S I+G R V A E N+ +A+V Y + G + +A
Sbjct: 71 --DKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEA 128
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F +MPE+N+V W ++GG D A F+ M V + V ++S
Sbjct: 129 ETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIM------PVKDVVARTNMISGYC 182
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+ G + + ++F M + I + ++ + G VD A ++ + MP + +S W
Sbjct: 183 QEGRLAEARELFDEMPRRNVIS-----WTTMISGYVQNGQVDVARKLFEVMPEKNEVS-W 236
Query: 387 GALLNACRVYGKPELGRI-AADNLFKLDP 414
A+L G + GRI A LF P
Sbjct: 237 TAML-----MGYTQGGRIEEASELFDAMP 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE + N + + ++L G+Q+HA +KS DVFV MY K G
Sbjct: 321 MQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGD 380
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD +++ WN+ I+ G + A+ F + +G D +TF L+A
Sbjct: 381 LVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSA 440
Query: 121 CSDCSLLQLGRQL 133
CS ++ G ++
Sbjct: 441 CSYTGKVKEGLEI 453
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 348/609 (57%), Gaps = 23/609 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTG 59
M E + + T + A S L GK++HA L++ I + FVG + DMY
Sbjct: 288 MVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 347
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFL 118
+ ++FD + R + WNA IS G + A+ FI + + G P+ T + +
Sbjct: 348 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVM 407
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC C +HG+ V+ GF + V N L+D Y + ++ +++ +FD + ++ V
Sbjct: 408 PACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRV 467
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARRE-----------------GVEPKDFMISSVLSA 221
SW +M+ YV + N + +R +P + +VL
Sbjct: 468 SWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPG 527
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA +A + G+ +HA A++ + +I VGSALVDMY KCG + + FN+MP +N++ W
Sbjct: 528 CAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 587
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRC---EAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
N +I G + AL F+ M + EA PN VT + V +ACS +G + +G+ +F
Sbjct: 588 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 647
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYG 397
Y M +G++P ++HYACVVDLLGRAG ++ AYE++ MP + W +LL ACR++
Sbjct: 648 YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQ 707
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
ELG +AA NL L+PN + ++VLLSN++++ G W +A VRK M+ +G+KK GCSWI
Sbjct: 708 NVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWI 767
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
++ +H F A D SH ++ ++ L L E+M+ GY+PDT+ L++V+E+EK +
Sbjct: 768 EFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCG 827
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSEK+A+AFG++ PPG IR+ KNLR+C DCH+A KFIS I+ RE+IVRD RFH F +
Sbjct: 828 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKE 887
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 888 GTCSCGDYW 896
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 199/397 (50%), Gaps = 11/397 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDADK 66
P++F FP + KA S L TG+Q+HA A+K G V V + +MY K G D K
Sbjct: 90 PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCK 149
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD + +R+ +WN++I+ + + A++AF ++ E T + ACS+ +
Sbjct: 150 VFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGV 209
Query: 127 ---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+LG+QLHG+ +R G D N L+ Y K V +K +F+ +D++ VSW +M
Sbjct: 210 MHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTM 268
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-- 241
+ + Q+ F EGVE I+SVL AC+ + L++G+ +HA ++
Sbjct: 269 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNND 328
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N FVGSALVDMY C ++ F+ + R + WNA+I GYA G + AL F
Sbjct: 329 LIE-NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 387
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + +PN T+ V+ AC A I + +K G K ++D+
Sbjct: 388 IEMIKV-AGLLPNTTTMASVMPACVHCEAFSNKESI-HGYAVKLGFKEDRYVQNALMDMY 445
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
R G +D + I M +R +S W ++ + G+
Sbjct: 446 SRMGKMDISETIFDSMEVRDRVS-WNTMITGYVLSGR 481
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 210/456 (46%), Gaps = 40/456 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSAL---HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M+ E + + FT + A S L H GKQLH +L+ G F + MY+K
Sbjct: 185 MQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD-QKTFTNNALMAMYAK 243
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G DD+ +F+ +R++ +WN IS+ R A+ F + G E D +T +
Sbjct: 244 LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASV 303
Query: 118 LNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L ACS L +G+++H +++R+ N V + LVD Y C +V + VFD I+ +
Sbjct: 304 LPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRR 363
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTA-RREGVEPKDFMISSVLSACARIAGLELGRSVH 235
W +M+ Y +N +E +F+ + G+ P ++SV+ AC S+H
Sbjct: 364 IELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIH 423
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
AVK + + +V +AL+DMY + G + +E F+ M R+ V WN +I GY G
Sbjct: 424 GYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYS 483
Query: 296 MALSSFEEMTSMRCEAV---------------PNYVTLVCVLSACSRAGAVEKGMKIFYS 340
AL EM M PN +TL+ VL C+ A+ KG +I ++
Sbjct: 484 NALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI-HA 542
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + + +VD+ + G ++ + + EMP + I+ W L+ AC ++GK E
Sbjct: 543 YAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT-WNVLIMACGMHGKGE 601
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
A LFK NM A GR EA
Sbjct: 602 ----EALELFK-------------NMVAEAGRGGEA 620
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R+ A+W + + + AI +I + +G PD F A L A S L+ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 132 QLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H V+ G+ +V+V N LV+ YGKC +G VFD I D++ VSW S + +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIA---GLELGRSVHAVAVKACVEGNI 247
+ E + F + E +E F + SV AC+ + GL LG+ +H +++ +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F +AL+ MY K G + D++ F +R++V WN +I ++ AL+ F M
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
E + VT+ VL ACS ++ G +I
Sbjct: 292 GVEL--DGVTIASVLPACSHLERLDVGKEI 319
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/549 (39%), Positives = 328/549 (59%), Gaps = 2/549 (0%)
Query: 38 KSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAID 97
+S + +VFV S D YSK DD ++FDEMPER+ ++N I+ +
Sbjct: 462 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 521
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
F +++ G + ++ + L+ + +G+Q+H LV G + N L+D Y
Sbjct: 522 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 581
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC + AK F +K+ +SW +++ YVQN + E Q+F RR G+ P SS
Sbjct: 582 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 641
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
++ A + +A + LGR +H+ +++ + ++F GS LVDMY KCG + +A F++MPERN
Sbjct: 642 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 701
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ WNA+I YAH G A A+ FE M + C P+ VT + VL+ACS G ++ MK
Sbjct: 702 SISWNAVISAYAHYGEAKNAIKMFEGM--LHCGFNPDSVTFLSVLAACSHNGLADECMKY 759
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
F+ M +Y I P EHYACV+D LGR G + +++ EMP + +W ++L++CR++G
Sbjct: 760 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHG 819
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
EL R+AAD LF ++P D+ +V+LSN++A G+WE+A V+K M+D G++K +G SW+
Sbjct: 820 NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWV 879
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
+K +I+ F + D + EI+ L +L +EM GY PD AL+ V+ E K+ + +
Sbjct: 880 EIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKY 939
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSE++A+AF L+ P G PIRI KNL C DCH+ K IS IV R++IVRD+ RFH F D
Sbjct: 940 HSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKD 999
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 1000 GVCSCGDYW 1008
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 21/387 (5%)
Query: 13 FPCLFKASSALHIP-VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
P ++ L++P T LH A+K G VFV + D Y K GL A ++F EM
Sbjct: 351 IPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 410
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+++ T+NA + G A+ F +RR G + + ++ S
Sbjct: 411 HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRS--------- 461
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
RS NV V N L+DFY KC+ + + +FD + ++++VS+ ++ Y N
Sbjct: 462 -------RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQ 514
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
++F ++ G + + +++LS + + +G+ +HA V + +G+
Sbjct: 515 CAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGN 574
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
AL+DMY KCG + A+ F+ E++ + W A+I GY G + AL F +M R
Sbjct: 575 ALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR--RAGL 632
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ T ++ A S + G ++ +S ++ G K + +VD+ + G +D A
Sbjct: 633 RPDRATFSSIIKASSSLAMIGLGRQL-HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGK 398
EMP R +IS W A+++A YG+
Sbjct: 692 RTFDEMPERNSIS-WNAVISAYAHYGE 717
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 7/307 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+HA + G + +G + DMYSK G+ D A F E++ +W A I+ V
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+ + A+ F ++RR G PD TF + + A S +++ LGRQLH +L+RSG+ +V
Sbjct: 614 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 673
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC + A FD + ++N +SW +++ Y E +N +MF G
Sbjct: 674 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 733
Query: 209 EPKDFMISSVLSACARIAGL--ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
P SVL+AC+ GL E + H + + + + ++D G+ G
Sbjct: 734 NPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 792
Query: 267 EIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ +MP + + + W +I+ G+ ++A + +++ M YV L +
Sbjct: 793 QKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIY--- 849
Query: 326 SRAGAVE 332
+RAG E
Sbjct: 850 ARAGQWE 856
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 147/347 (42%), Gaps = 27/347 (7%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
YS +G A +F P RN TW + GR +A+ F + G PD +T
Sbjct: 298 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 357
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
LN C++ LH F ++ G D +V VCN L+D Y K + A+ VF + D
Sbjct: 358 TTVLN-LPGCTV----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD 412
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ V++ +M++ + Q+F RR G L L +
Sbjct: 413 KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHP---------------LHLLQYS 457
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ + V N+FV ++L+D Y KC + D F++MPER+ V +N II YA A
Sbjct: 458 HSRSRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA 516
Query: 295 DMALSSFEEMTSMRCE-AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
L F EM + + V Y T+ LS V G +I + L G+
Sbjct: 517 ATVLRLFREMQKLGFDRQVLPYATM---LSVAGSLPDVHIGKQIHAQLVL-LGLASEDLL 572
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G++D A + IS W AL+ G+ E
Sbjct: 573 GNALIDMYSKCGMLDAAKSNFSNRSEKSAIS-WTALITGYVQNGQHE 618
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 72/126 (57%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + P+ TF + KASS+L + G+QLH+ ++SG VF G DMY+K G
Sbjct: 627 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 686
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A + FDEMPERN +WNA IS G KNAI F + G PD +TF + L A
Sbjct: 687 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 746
Query: 121 CSDCSL 126
CS L
Sbjct: 747 CSHNGL 752
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 125 SLLQLGRQLHGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
SLL G H R+ FD N+ N ++ Y ++ A+ +F +N +W
Sbjct: 266 SLLSSG---HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + + +F EGV P +++VL+ + G + S+H A+K
Sbjct: 323 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVP-SLHPFAIK 377
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++FV + L+D Y K G + A F +M +++ V +NA++ G + +G AL
Sbjct: 378 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQL 437
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M P + L+ + SR+ +V + +F + +L +D
Sbjct: 438 FAAMRRAGYSRHP--LHLLQYSHSRSRSTSV---LNVFVNNSL--------------LDF 478
Query: 361 LGRAGLVDRAYEIIKEMPMRPTIS 384
+ +D + EMP R +S
Sbjct: 479 YSKCDCLDDMRRLFDEMPERDNVS 502
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
NIF + ++ Y G + A+ F P RN W ++ +A G ALS F M
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM- 345
Query: 306 SMRCEAVPNYVTLVCVLS--ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ +P+ VT+ VL+ C+ + + +K+G+ ++D +
Sbjct: 346 -LGEGVIPDRVTVTTVLNLPGCT--------VPSLHPFAIKFGLDTHVFVCNTLLDAYCK 396
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
GL+ A + EM + ++ + A++ C G
Sbjct: 397 HGLLAAARRVFLEMHDKDAVT-YNAMMMGCSKEG 429
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/581 (40%), Positives = 332/581 (57%), Gaps = 35/581 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +T+PC+ KASS G Q+HA ++ G +VFVG MY K G +A
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 1181
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ DZMP R++ +WN+ ++ G+ +A++ + G +PD T + L A ++
Sbjct: 1182 RVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 1241
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L + V K +F + +K+ VSW M+
Sbjct: 1242 L---------------------------------DNVSFVKEMFMKLANKSLVSWNVMIA 1268
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
VY+ N +FL V+P I+SVL AC ++ L LGR +H V+ ++
Sbjct: 1269 VYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQP 1328
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +AL+DMY KCG ++ A F++M R++V W ++I Y G A+S F M
Sbjct: 1329 NLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQ 1388
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ + V VLSACS AG +++G F MT + I P EH+ C+VDLLGRAG
Sbjct: 1389 DLGLN--PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAG 1446
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
VD AY IK+MPM P VWGALL+ACRVY +G +AAD LF+L P SG +VLLSN
Sbjct: 1447 QVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSN 1506
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A GRWE+ VR MK GIKK G S + NR+H F A D SH ++ +I L
Sbjct: 1507 IYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDV 1566
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L +MK AGY+P+T+ AL+DVEEE+K + HSEK+A+AF ++ PG PIRITKNLR+
Sbjct: 1567 LVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRV 1626
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH A K IS IVGRE+ +RD NRFH F++G CSC DYW
Sbjct: 1627 CGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 131 RQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++LH + + N S+ L+ Y C E + +FD I KN V + M+ YV
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N+ + +F G++P + VL A + L +G +HA V+ ++ N+FV
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+ L+ MYGKCG + +A ++MP R++V WN+++ G A G D AL +EM +
Sbjct: 1164 GNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 1223
Query: 310 EAVPNYVTLVCVLSACS 326
+ P+ T+ +L A +
Sbjct: 1224 K--PDAGTMASLLPAVT 1238
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+ + + A L + G+++H ++ ++ + + DMY+K G
Sbjct: 1286 MEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGC 1345
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD+M R++ +W + IS + G+ ++A+ F ++ G PD I F + L+A
Sbjct: 1346 LEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 1405
Query: 121 CSDCSLLQLGR 131
CS LL GR
Sbjct: 1406 CSHAGLLDEGR 1416
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/588 (40%), Positives = 341/588 (57%), Gaps = 8/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P TF + K+ ++L K + ALKSG D V + SK
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKE 345
Query: 61 KDDADKMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA +F M E +N+ +W A IS + G A++ F +RR G +P+ T+ A L
Sbjct: 346 MDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ ++H ++++ ++ + SV L+D Y K A VF+ I K+ ++
Sbjct: 406 VHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMA 461
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR-IAGLELGRSVHAVA 238
W +ML Y Q E E ++F +EG++P +F SSV++ACA A E G+ HA A
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYA 521
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K + + V SALV MY K G+I A F + ER+LV WN++I GY+ G A AL
Sbjct: 522 IKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKAL 581
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM + + VT + V++AC+ AG VEKG K F SM + I P +HY+C++
Sbjct: 582 EVFDEMQKRNMDV--DAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMI 639
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DL RAG++++A II EMP P +VW LL A RV+ ELG +AA+ L L P DS
Sbjct: 640 DLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSA 699
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSNM+AA G W+E VRK M +KK G SWI VKN+ + F A D +H + +
Sbjct: 700 AYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQ 759
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I + L++L +K AGY PDT +D+E+E+K T + HHSE++A+AFGLIA PP +PI+
Sbjct: 760 IYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQ 819
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCH+ K +S + R ++VRD+NRFH F DG CSC DYW
Sbjct: 820 IVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 197/401 (49%), Gaps = 8/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN +T + A + G Q+HA+ +K G + V S +YS+ G+
Sbjct: 185 MQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD+M R+ TWN+ I+ V G+ + F ++ G +P +TF + + +
Sbjct: 245 LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKS 304
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-KNDVS 179
C+ L L + + ++SGF + V L+ KC E+ A +F + + KN VS
Sbjct: 305 CASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVS 364
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +QN + +F RREGV+P F S++L+ + E+ HA +
Sbjct: 365 WTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEM----HAEVI 420
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E + VG+AL+D Y K G+ DA F + ++L+ W+A++ GYA G + A
Sbjct: 421 KTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAK 480
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F ++ + PN T V++AC+ A + K F++ +K + + +V
Sbjct: 481 LFHQLIKEGIK--PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVT 538
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G +D A+E+ K R +S W ++++ +G+ +
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVS-WNSMISGYSQHGQAK 578
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 163/320 (50%), Gaps = 5/320 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++ T C+F + G+Q+H +K G + V VG S DMY KT +D
Sbjct: 89 LQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGR 148
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FDEM ERN+ +W + ++ G + F ++ G P+ T + A +
Sbjct: 149 RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEG 208
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++ +G Q+H +V+ GF+ + V N L+ Y + + A+ VFD + ++ V+W SM+
Sbjct: 209 VVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIA 268
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV+N ++ ++F + GV+P +SV+ +CA + L L + + A+K+
Sbjct: 269 GYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTT 328
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +AL+ KC + DA F+ M E +N+V W A+I G G D A++ F +
Sbjct: 329 DQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQ- 387
Query: 305 TSMRCEAV-PNYVTLVCVLS 323
MR E V PN+ T +L+
Sbjct: 388 --MRREGVKPNHFTYSAILT 405
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 166/354 (46%), Gaps = 19/354 (5%)
Query: 64 ADKMFDEMPER--NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
A +FD++P R L N + + + K A++ F++L + +PD T N C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +LGRQ+H V+ G +VSV LVD Y K V + VFD + ++N VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 182 SMLVVYVQN----YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
S+L Y N Y E CQM + EGV P + +S+V++A + +G VHA+
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQM----QYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAM 219
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK E I V ++L+ +Y + G ++DA F+KM R+ V WN++I GY G
Sbjct: 220 VVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ---D 276
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L FE M+ V P ++T V+ +C+ + +K+ LK G
Sbjct: 277 LEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELAL-VKLMQCKALKSGFTTDQIVITA 335
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
++ L + +D A + M + W A+++ C G G A NLF
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG----GNDQAVNLF 385
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/612 (38%), Positives = 338/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK- 66
PN +TFP L K+ + L G Q+H LK G D++V S MY + +DA K
Sbjct: 61 PNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKV 120
Query: 67 ------------------------------MFDEMPERNLATWNAYISNAVLGGRPKNAI 96
MFDE+P +++ +WNA IS V G K A+
Sbjct: 121 FDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEAL 180
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T ++A + ++LGRQ+H ++ GF N+ + N L+DFY
Sbjct: 181 ELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFY 240
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC E+ A +F G+ K+ +SW ++ Y + +F R G P D +
Sbjct: 241 SKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTML 300
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K V + ++L+DMY KCG I+ A FN M
Sbjct: 301 SILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML 360
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G+A G A+ A F M + E P+ +T V +LSACS AG ++ G
Sbjct: 361 HKSLPAWNAMIFGFAMHGRANAAFDIFSRMR--KNEIKPDDITFVGLLSACSHAGMLDLG 418
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF SMT Y I P EHY C++DLLG +GL A E+I M M P +W +LL AC+
Sbjct: 419 RHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACK 478
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G ELG A NLFK++PN+ G++VLLSN++A GRW E +R + D G+KK GC
Sbjct: 479 MHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGC 538
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 539 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGA 598
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ P + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 599 LRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 658
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 659 FRDGVCSCNDYW 670
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 174/368 (47%), Gaps = 37/368 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E NL WN L P +A+ ++ + G P+ TF L +C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------------- 170
+ G Q+HG +++ G++ ++ V L+ Y + + A VFD
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 171 -------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
G I+ K+ VSW +M+ YV+ + ++F + V P +
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+SA AR +ELGR VH+ N+ + +AL+D Y KCG ++ A F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F+EM +R PN VT++ +L AC+ GA++
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEM--LRSGESPNDVTMLSILHACAHLGAID 313
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK G+ + ++D+ + G ++ A+++ M + ++ W A++
Sbjct: 314 IGRWIHVYIDKRLK-GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMI 371
Query: 391 NACRVYGK 398
++G+
Sbjct: 372 FGFAMHGR 379
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 174/409 (42%), Gaps = 36/409 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + AS+ G+Q+H+ G ++ + + D YSK G
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F + +++ +WN I K A+ F + R+G P+ +T + L+A
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ A VF+ ++ K+
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLP 365
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV---- 234
+W +M+ + + +F R+ ++P D +LSAC+ L+LGR +
Sbjct: 366 AWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM 425
Query: 235 -HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
H + +E ++D+ G G ++AE + M E + V W +++ G
Sbjct: 426 THNYKITPKLEHY----GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV--------EKGMK-------- 336
+ ++ + + + +YV L + + R V +KGMK
Sbjct: 482 NVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSI 541
Query: 337 ----IFYSMTLKYGIKP-GAEHYACVVD---LLGRAGLVDRAYEIIKEM 377
+ + + P E Y + + LL AG V E+++EM
Sbjct: 542 EIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEM 590
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/591 (40%), Positives = 354/591 (59%), Gaps = 8/591 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR P++FT + ++L + G+Q+H LK G DV V + +Y++TG
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 1011
Query: 61 KDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ K+F MPE + +WN+ I + A+ F+ + R G +TF L+
Sbjct: 1012 FTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILS 1071
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-KNDV 178
A S SL ++ Q+H +++ + ++ N L+ YGKC E+ + +F + + +++V
Sbjct: 1072 AVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEV 1131
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+ Y+ N + ++G F ++VLSACA +A LE G VHA
Sbjct: 1132 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACG 1191
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++AC+E ++ VGSALVDMY KCG I A F MP RN+ WN++I GYA GH + AL
Sbjct: 1192 IRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKAL 1251
Query: 299 SSFEEMTSMRCEAVPNYVT-LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M M P++V L+ VLSACS G VE+G + F SM+ Y + P EH++C+
Sbjct: 1252 KLFTRM--MLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCM 1309
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKLDPN 415
VDLLGRAG +D + I MPM+P + +W +L AC R G+ ELGR AA+ L +L+P
Sbjct: 1310 VDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQ 1369
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
++ N+VLL+NM+A+ +WE+ R MK+ +KK AGCSW+++K+ +H+F A D H
Sbjct: 1370 NAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPE 1429
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
I L +L +M+ AGYIP T +AL+D+E E K + +HSEKIA+AF ++ +
Sbjct: 1430 KDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSAL 1488
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+CGDCHSAF +IS IVGR++++RD+NRFH F DG CSC DYW
Sbjct: 1489 PIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 199/392 (50%), Gaps = 12/392 (3%)
Query: 8 PNDFTFPCLFKA--SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
PN++TF L A SS +Q+ A KSG + D++VG + +++ GL DDA
Sbjct: 751 PNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAK 810
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++M RN+ + N + V + + A F ++ G + ++ L+A S+ S
Sbjct: 811 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG-INSDSYVVLLSAFSEFS 869
Query: 126 LLQ----LGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+L+ GR++H ++R+G + N V++ NGLV+ Y K + A VF+ +++K+ VSW
Sbjct: 870 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 929
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ QN E+ + FL RR G P +F + S LS+CA + + LG +H +K
Sbjct: 930 NSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 989
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA-HQGHADMALS 299
++ ++ V +AL+ +Y + G + F+ MPE + V WN++IG + + A+
Sbjct: 990 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 1049
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F EM MR + VT + +LSA S E +I +++ LKY + ++
Sbjct: 1050 YFLEM--MRGGWGLSRVTFINILSAVSSLSLHEVSHQI-HALVLKYCLSDDTAIGNALLS 1106
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G+ G ++ +I M W ++++
Sbjct: 1107 CYGKCGEMNECEKIFARMSETRDEVSWNSMIS 1138
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 22/413 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
++LH ++K G + ++F+ + ++Y + G A K+FDEM RNL TW IS
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNV 146
G+P A F ++ R G P+ F + L AC + S +LG Q+HG + ++ + +V
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 147 SVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
VCN L+ YG C + A+ VFD I +N +SW S++ VY + + + +F + ++
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742
Query: 206 EGV----EPKDFMISSVLS-ACARIA-GLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
EG+ +P ++ S+++ AC+ + GL + + A K+ +++VGSALV + +
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G DA+ F +M RN+V N ++ G Q + A F EM + +YV L
Sbjct: 803 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL- 861
Query: 320 CVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYAC-VVDLLGRAGLVDRAYEIIK 375
LSA S +E+G + ++ ++ G+ +V++ ++G + A + +
Sbjct: 862 --LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 919
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS--GNHVLLSNM 426
M + ++S W +L++ + E AA++ ++ S N L+S +
Sbjct: 920 LMVEKDSVS-WNSLISGL---DQNECSEDAAESFLRMRRTGSMPSNFTLISTL 968
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 173/364 (47%), Gaps = 25/364 (6%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
TF + +N + R+LH ++ GF GN+ + N L++ Y + ++G A+ +FD +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI--AGLEL 230
++N V+W ++ Y QN + + C F R G P + S L AC +G +L
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G +H + K ++ V + L+ MYG C S DA F+++ RN + WN+II Y+
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 290 HQGHADMALSSFEEMTSMRCEAV-----PNYVTLVCVLS-ACSRAGAVEKGMKIFYSMTL 343
+G +S+++ +SM+ E + PN T +++ ACS +V+ G+ + M
Sbjct: 726 RRGD---XVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACS---SVDFGLCVLEQMLA 779
Query: 344 ---KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
K G + +V R GL D A I ++M +R +S+ G ++ K +
Sbjct: 780 RVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLV----KQK 835
Query: 401 LGRIAADNLFKLDP---NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
G AA ++ +S ++V+L + F+ EE +E+ I+ G + +
Sbjct: 836 QGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 895
Query: 458 SVKN 461
++ N
Sbjct: 896 AIGN 899
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/647 (36%), Positives = 365/647 (56%), Gaps = 68/647 (10%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------ 59
ISP FTF + + +A GK++H+ +K GQ V V S +MY+K G
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAK 200
Query: 60 -------LKDD------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
LKD A +FD+M + ++ +WN+ I+ G
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIR 260
Query: 95 AIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
A++ F L+ + +PD T + L+AC++ L+LG+Q+H +VR+ D +V N L+
Sbjct: 261 ALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALI 320
Query: 154 DFYGKCNEVGL---------------------------------AKVVFDGIIDKNDVSW 180
Y K V + A+ +FD + ++ V+W
Sbjct: 321 SMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAW 380
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y QN + +F REG +P ++ +++VLS + +A L+ G+ +HAVA++
Sbjct: 381 TAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIR 440
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALS 299
++ VG+AL+ MY + GSI+DA FN + R+ + W ++I A G + A+
Sbjct: 441 LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIE 500
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M +R P+++T V VLSAC+ G VE+G F M + I+P + HYAC++D
Sbjct: 501 LFEKM--LRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMID 558
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAGL++ AY I+ MP+ P + WG+LL++CRV+ +L ++AA+ L +DPN+SG
Sbjct: 559 LLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGA 618
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++ L+N +A G+WE+A VRK MKD +KK G SW+ +KN++HIF +D H + I
Sbjct: 619 YLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAI 678
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
M++K+ +E+K G+IPDTN L+D+E+E K + HHSEK+A+AF LI P +RI
Sbjct: 679 YCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRI 738
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHSA ++IS +V RE+IVRD RFH F DG CSC DYW
Sbjct: 739 MKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 202/470 (42%), Gaps = 102/470 (21%)
Query: 26 PVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
P G+ +HA +K G + VF+ + ++Y KTG DA ++FDEMP + +WN +S
Sbjct: 28 PFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILS 87
Query: 85 NAVLGG-------------RP------------------KNAIDAFINLRRTGGEPDLIT 113
G +P K+A+ AF+ + +G P T
Sbjct: 88 AHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFT 147
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F L +C+ L +G+++H F+V+ G G V V N L++ Y KC + +AKVVFD +
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMF--------------------------------L 201
K+ +W +M+ +++Q + + +F
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
+ ++P F + SVLSACA L+LG+ +HA V+A V+ VG+AL+ MY K G
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 262 SIQ---------------------------------DAEIAFNKMPERNLVCWNAIIGGY 288
+++ A F+ + R++V W A+I GY
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A G AL F M +R PN TL VLS S +++ G K +++ ++
Sbjct: 388 AQNGLISDALVLFRLM--IREGPKPNNYTLAAVLSVISSLASLDHG-KQLHAVAIRLEEV 444
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYG 397
++ + R+G + A +I + R T++ W +++ + +G
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLT-WTSMILSLAQHG 493
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 36/297 (12%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ + K + A+ VFD I + VSW +M+V Y ++ FL G+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F ++VL++CA L++G+ VH+ VK G + V ++L++MY KCG A++
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202
Query: 270 FNK-------------------------------MPERNLVCWNAIIGGYAHQGHADMAL 298
F++ M + ++V WN+II GY HQG+ AL
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+F M P+ TL VLSAC+ +++ G +I ++ ++ + ++
Sbjct: 263 ETFSFMLK-SSSLKPDKFTLGSVLSACANRESLKLGKQI-HAHIVRADVDIAGAVGNALI 320
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISV--WGALLNACRVYGKPELGRIAADNLFKLD 413
+ ++G V+ A+ I+ E+ P+++V + +LL+ G + R D+L D
Sbjct: 321 SMYAKSGAVEVAHRIV-EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 9/190 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE PN++T + S+L GKQLHA+A++ ++ V VG + MYS++G
Sbjct: 403 MIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGS 462
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA K+F+ + R+ TW + I + G AI+ F + R +PD IT+ L+
Sbjct: 463 IKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLS 522
Query: 120 ACSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----ID 174
AC+ L++ G+ + + S ++D G+ GL + ++ I I+
Sbjct: 523 ACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRA---GLLEEAYNFIRNMPIE 579
Query: 175 KNDVSWCSML 184
+ V+W S+L
Sbjct: 580 PDVVAWGSLL 589
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 230 LGRSVHAVAVKACVEG-NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+GR +HA +K + +F+ + L+++Y K GS DA F++MP + WN I+ +
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A G+ D A F+E+ P+ V+ ++ + G + + F M + GI
Sbjct: 90 AKAGNLDSARRVFDEIPQ------PDSVSWTTMIVGYNHLGLFKSAVHAFLRM-VSSGIS 142
Query: 349 PGAEHYACVVDLLGRAGLVD---RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
P + V+ A +D + + + ++ + V +LLN G + ++
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202
Query: 406 ADNL 409
D +
Sbjct: 203 FDRM 206
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/608 (37%), Positives = 352/608 (57%), Gaps = 22/608 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTG 59
M E + P+ TF + A S L + TGK++HA AL++ I + FVG + DMY G
Sbjct: 207 MVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCG 266
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFL 118
+ +FD + +R + WNA I+ + A+ FI + G + T + +
Sbjct: 267 QVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIV 326
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
A C + +HG++++ G + N + N L+D Y + ++ +K +FD + D++ V
Sbjct: 327 PAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIV 386
Query: 179 SWCSMLVVYV---------------QNYEEENGCQM-FLTARREGVEPKDFMISSVLSAC 222
SW +++ YV Q EE++ + ++ +P + +VL C
Sbjct: 387 SWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGC 446
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
A ++ L G+ +HA A++ + + VGSALVDMY KCG + A F++MP RN++ WN
Sbjct: 447 ASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWN 506
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRC---EAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
II Y G +L FE+M + E P VT + + ++CS +G V++G+ +F+
Sbjct: 507 VIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFH 566
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGK 398
M ++GI+P +HYAC+VDL+GRAG V+ AY ++ MP + W +LL ACR+Y
Sbjct: 567 KMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHN 626
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
E+G IAA+NL +L P+ + ++VLLSN++++ G W++A +R+ MK +G+KK GCSWI
Sbjct: 627 IEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIE 686
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
+ +H F A D SH ++ ++ L L E +K GY+PDT L+D++EEEK T + H
Sbjct: 687 YGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGH 746
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+AFG++ PPG IR+ KNLR+C DCH+A KFIS I RE+I+RD RFH F DG
Sbjct: 747 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDG 806
Query: 579 YCSCSDYW 586
CSC DYW
Sbjct: 807 TCSCGDYW 814
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 197/424 (46%), Gaps = 18/424 (4%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALK--SGQIHDVFVGCSAFDMYSKTGLKDDA 64
SP++F FP + KA + + GKQ+HA K G V + + +MY K G DA
Sbjct: 7 SPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDA 66
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FD + ER+ +WN+ IS + AI AF + G EP T + ACS+
Sbjct: 67 YKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNL 126
Query: 125 SL---LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
L LG+Q+HG R G S N L+ Y K + AK + D++ V+W
Sbjct: 127 RKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWN 185
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ + QN EGV+P +SVL AC+ + L G+ +HA A++
Sbjct: 186 SMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRT 245
Query: 242 -CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V N FVGSALVDMY CG ++ + F+ + +R + WNA+I GYA H + AL
Sbjct: 246 DDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALML 305
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + N T+ ++ A R + + I + +K G++ ++D+
Sbjct: 306 FIEMEAA-AGLYSNATTMSSIVPAYVRCEGISRKEGI-HGYVIKRGLETNRYLQNALIDM 363
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP--------ELGRIAADNLFKL 412
R G + + I M R +S W ++ + + G+ E+ RI + +
Sbjct: 364 YSRMGDIKTSKRIFDSMEDRDIVS-WNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422
Query: 413 DPND 416
D ND
Sbjct: 423 DYND 426
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 169/392 (43%), Gaps = 34/392 (8%)
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG--NVSVCNGLVDFYGKCNEV 162
+G PD F A L A + L LG+Q+H + + G+ +V++ N LV+ YGKC +
Sbjct: 4 SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
G A VFD I +++ VSW S++ + E E + F EG EP F + S+ AC
Sbjct: 64 GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123
Query: 223 ARIA---GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
+ + GL LG+ +H + F +AL+ MY K G + DA+ +R+LV
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIF 338
WN++I ++ + + + + M E V P+ VT VL ACS + G +I
Sbjct: 183 TWNSMISSFSQN---ERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ + + +VD+ G V+ ++ + + I +W A++ Y +
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESG-RLVFDSVLDRKIGLWNAMIAG---YAQ 295
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
E +D +L M AA G + A M + + C IS
Sbjct: 296 SE--------------HDEKALMLFIEMEAAAGLYSNA----TTMSSI-VPAYVRCEGIS 336
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
K IH + K E N +Q L + M
Sbjct: 337 RKEGIHGYVIK-RGLETNRYLQNALIDMYSRM 367
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/581 (39%), Positives = 338/581 (58%), Gaps = 7/581 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A + L G+ + A +G DVFV S +Y++ G DA K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F MP R+ TW+ ++ V G+P +AI + +R G + D + + AC+ +
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG L+R G +V LVD Y K + +A VF ++ +NDVSW +M+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN + + ++F + G++P + S L AC+ I L+LGRSVH V+ + N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--T 305
+G+A +DMY KCGS+ A++ FN + +R+L+ WNA+I G AL+ F+EM T
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
MR P++ T +LSA S +G VE+G F M + I P +HY C+VDLL R+G
Sbjct: 405 GMR----PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSG 460
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
LV+ A +++ M PT+++W ALL+ C K ELG ADN+ +L P+D G L+SN
Sbjct: 461 LVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSN 520
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++AAT +W++ VRK MKD G KK GCS I ++ H+F +D SH + EI + + K
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAK 580
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L EM+ GYIP T F +D+EEE K ++ +HSE++A+AFGL+ PG + I KNLR+
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRV 640
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH A K+IS I RE++VRD RFH F DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + ++ + +A +A G +H L+ G DV S DMY+K GL
Sbjct: 200 MREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGL 259
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M RN +W+A IS G+ A+ F N++ +G +PD + L A
Sbjct: 260 LDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLA 319
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ L+LGR +HGF+VR FD N + +D Y KC + A+++F+ I D++ + W
Sbjct: 320 CSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILW 378
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-----LGRSVH 235
+M+ + ++ +F G+ P +S+LSA + +E GR V+
Sbjct: 379 NAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVN 438
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGG 287
+ + + LVD+ + G +++A M E + W A++ G
Sbjct: 439 HFKITPAEKHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 198/453 (43%), Gaps = 41/453 (9%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-LKDDADKMFDEMPERNLATWNAYISNA 86
T +LHAL + S + A Y++ G L + ++A WNA I+
Sbjct: 26 TLARLHALLIVSSSASHTLISSLA-AAYARAGDLAAAESTLTATAASSSIAAWNAIIAAH 84
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G P +A+ F L PD TF L+AC+ L+ G + +G+ +V
Sbjct: 85 SRRGSPASALRVFRAL-PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC+ L+ Y + +G A VF + ++ V+W +M+ +V + + QM+ R +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV+ + ++ V+ AC + +G SVH ++ + ++ ++LVDMY K G + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M RN V W+A+I G+A G +D AL F M + + P+ LV L ACS
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQ--PDSGALVSALLACS 321
Query: 327 RAGAVEKGMKIF-----------------YSMTLKYGIKPGAEHYACVV---DLL----- 361
G ++ G + M K G A+ ++ DL+
Sbjct: 322 NIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381
Query: 362 -------GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI---AADNLFK 411
GR ++ + E MRP + + +LL+A G E G++ N FK
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ P + ++V L ++ A +G EEA + MK
Sbjct: 442 ITPAEK-HYVCLVDLLARSGLVEEASDLLTSMK 473
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 336/566 (59%), Gaps = 4/566 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + PN +TF + A + V G+Q+H+L K G + +VFV + DMY+K
Sbjct: 121 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 180
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLITFCAFLN 119
A+K+F+EMP RNL +WN I + AI F L D ++F + +
Sbjct: 181 MLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFS 240
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC++ L+ G+Q+HG ++ G V + N L D YGKC +F ++ V+
Sbjct: 241 ACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVT 300
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W M++ YV N+ E+ C F RR+G P + SSVL +CA +A L G +H +
Sbjct: 301 WNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQII 360
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
++ N+ V S+L+ MY KCGS+ DA F + +RN+VCW AII GHA+ +
Sbjct: 361 RSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVE 420
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M +R P+Y+T V VLSACS G VE+G F SM +GI PG EHYAC+VD
Sbjct: 421 LFEQM--LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVD 478
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LL RAG +DRA I+ MP++P SVWGALL+ACR + +G+ A LF L+P++ GN
Sbjct: 479 LLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGN 538
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLL N+ G EAD VR++M+ +G++K GCSWI +KN ++F D SHE+ EI
Sbjct: 539 YVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEI 598
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
ML KL+E +K GY+ +T FA+ + EE K + +HSEKIALAFGL+++P G PIRI
Sbjct: 599 YEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRI 657
Query: 540 TKNLRICGDCHSAFKFISGIVGREVI 565
KNLR CGDCH+ KF S I RE+I
Sbjct: 658 KKNLRTCGDCHTVMKFASEIFAREII 683
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 193/370 (52%), Gaps = 7/370 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVL 88
Q+H+ + + + F+ + ++Y+K G D +F P+ +N+ +W + I+
Sbjct: 48 QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
RP A+ F ++RR+G P+ TF A L+AC+D + G Q+H + + GF V V
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFV 167
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC ++ +A+ VF+ + +N VSW +M+V ++QN + F T E +
Sbjct: 168 VSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENL 227
Query: 209 EPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
D SSV SACA LE G+ VH VA+K V +++ ++L DMYGKCG D
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVA 287
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+ R++V WN +I Y + + + A +SF M R ++P+ + VL +C+
Sbjct: 288 KLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMR--RKGSIPDEASYSSVLHSCAN 345
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+ +G + ++ ++ G + ++ + + G + A++I +E R + W
Sbjct: 346 LAALYQGT-LIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR-NVVCWT 403
Query: 388 ALLNACRVYG 397
A++ AC+ +G
Sbjct: 404 AIIAACQQHG 413
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/595 (38%), Positives = 348/595 (58%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P +FPC KA S+L +GKQ H A G D+FV + MYS G
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF------ 114
+DA K+FDE+P+RN+ +W + I L G +A+ F +L + D F
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE--VGLAKVVFDGI 172
+ ++ACS L +H F+++ GFD VSV N L+D Y K E V +A+ +FD I
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACARIAGLELG 231
+DK+ VS+ S++ VY Q+ ++F + + V +S+VL A + L +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H ++ +E ++ VG++++DMY KCG ++ A AF++M +N+ W A+I GY
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GHA AL F M PNY+T V VL+ACS AG +G + F +M ++G++PG
Sbjct: 367 GHAAKALELFPAMIDSGVR--PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGRAG + +AY++I+ M M+P +W +LL ACR++ EL I+ LF+
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LD ++ G ++LLS+++A GRW++ + VR MK+ G+ K G S + + +H+F D
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H + +I L +L ++ AGY+ +T+ +DV+EEEK + HSEK+A+AFG++
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG + + KNLR+C DCH+ K IS IV RE +VRD RFH F DG CSC DYW
Sbjct: 605 VPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 157/331 (47%), Gaps = 11/331 (3%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
++ +WN+ I++ G A+ AF ++R+ P +F + ACS + G+Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G+ ++ V + L+ Y C ++ A+ VFD I +N VSW SM+ Y N
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 195 NGCQMFLTARREGVEPKDFM------ISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ +F + + D M + SV+SAC+R+ L S+H+ +K + +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 249 VGSALVDMYGKCGS--IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
VG+ L+D Y K G + A F+++ +++ V +N+I+ YA G ++ A F +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ N +TL VL A S +GA+ G K + ++ G++ ++D+ + G
Sbjct: 280 NKV-VTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V+ A + M + + W A++ ++G
Sbjct: 338 VETARKAFDRMKNK-NVRSWTAMIAGYGMHG 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 55/339 (16%)
Query: 167 VVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+F+ +DK DV SW S++ ++ + F + R+ + P + AC+ +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+ G+ H A + +IFV SAL+ MY CG ++DA F+++P+RN+V W ++I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 286 GGYAHQGHADMALSSFEEMTSMRCE----AVPNYVTLVCVLSACSRAGAVEKGM-KIFYS 340
GY G+A A+S F+++ + + + LV V+SACSR A KG+ + +S
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA--KGLTESIHS 207
Query: 341 MTLKYGIKPGAE---------------------------------HYACVVDLLGRAGLV 367
+K G G Y ++ + ++G+
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 368 DRAYEIIKEMPMRPTIS----VWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GNH 420
+ A+E+ + + ++ +L A G +G+ D + ++ D G
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
++ +M+ GR E A MK+ ++ SW ++
Sbjct: 328 II--DMYCKCGRVETARKAFDRMKNKNVR-----SWTAM 359
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/628 (37%), Positives = 361/628 (57%), Gaps = 49/628 (7%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A +++ GKQ+H ++++G + DVFVG + MY+K ++A+
Sbjct: 230 LRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEAN 289
Query: 66 KMFDEMPERNLATWNAYIS------------------------------NAVLGGRPKN- 94
K+F+ + ++++ +WNA ++ +AV+ G +
Sbjct: 290 KVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKG 349
Query: 95 ----AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN----- 145
A+D F ++ G EP+++T + L+ C+ L G+Q H +++++ + N
Sbjct: 350 HGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKE 409
Query: 146 --VSVCNGLVDFYGKCNEVGLAKVVFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMF- 200
+ V NGL+D Y KC +A+ +FD I DKN V+W M+ Y Q+ E + ++F
Sbjct: 410 DDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFA 469
Query: 201 -LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI-FVGSALVDMYG 258
+ ++ ++P F +S L ACAR+ L LGR +HA A++ E + +VG+ L+DMY
Sbjct: 470 QIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYS 529
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
K G I A F+ M RN+V W +++ GY G + AL F++M + + +T
Sbjct: 530 KSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAV--DGITF 587
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ VL ACS +G V++GM F+ M +GI PGAEHYAC+VDLLGRAG ++ A E+IK M
Sbjct: 588 LVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMS 647
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
M PT VW ALL+A R++ ELG AA L +L + G++ LLSN++A RW++
Sbjct: 648 MEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVAR 707
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+R MK GI+K GCSWI K F D SH + +I +L L + +K GY+P
Sbjct: 708 IRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQ 767
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
T+FAL+DV++EEK + HSEK+A+A+G++ PG PIRI KNLRICGDCHSA +IS
Sbjct: 768 TSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISM 827
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I+ E+++RD++RFH F G CSC YW
Sbjct: 828 IIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 222/467 (47%), Gaps = 61/467 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R P+ +TFP + KA + G +HA+ +G +VF+ S MY + G
Sbjct: 118 MQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGA 177
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAID-AFI--NLRRTGGEPDLITF 114
DDA +MFDE+ ER ++ +WN+ ++ V GG+ + A+ AF N PD IT
Sbjct: 178 LDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITL 237
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L AC+ LQ G+Q+HGF VR+G +V V N LV Y KC+++ A VF+GI
Sbjct: 238 VNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKK 297
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARRE---------------------------- 206
K+ VSW +M+ Y Q ++ +F + E
Sbjct: 298 KDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDV 357
Query: 207 -------GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV-------EGNIFVGSA 252
G+EP ++S+LS CA + L G+ HA +K + E ++ V +
Sbjct: 358 FRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNG 417
Query: 253 LVDMYGKCGSIQDAEIAFNKM--PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
L+DMY KC S + A F+ + ++N+V W +IGGYA G A+ AL F ++ +
Sbjct: 418 LIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTS 477
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-----CVVDLLGRAG 365
PN TL C L AC+R G + G ++ Y ++ E C++D+ ++G
Sbjct: 478 LKPNAFTLSCALMACARLGELRLGRQLH-----AYALRNENESEVLYVGNCLIDMYSKSG 532
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+D A + M +R +S W +L+ ++G+ E D + KL
Sbjct: 533 DIDAARAVFDNMKLRNVVS-WTSLMTGYGMHGRGEEALHLFDQMQKL 578
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 146/280 (52%), Gaps = 15/280 (5%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WNA I +V G + + + ++R G PD TF L AC + L+ G +H +
Sbjct: 95 WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---NDVSWCSMLVVYVQNYEEEN 195
+G NV +CN +V YG+C + A +FD ++++ + VSW S+L YVQ +
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214
Query: 196 GCQMFLTARREG------VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
++ A R G + P + ++L ACA + L+ G+ VH +V+ + ++FV
Sbjct: 215 ALRI---AFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFV 271
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+ALV MY KC + +A F + ++++V WNA++ GY+ G D ALS F+ M
Sbjct: 272 GNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
+ + +T V++ ++ G + + +F M L YG++P
Sbjct: 332 KL--DVITWSAVIAGYAQKGHGFEALDVFRQMQL-YGLEP 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 3/186 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDV-FVGCSAFDMYSKTGL 60
++ + PN FT C A + L G+QLHA AL++ +V +VG DMYSK+G
Sbjct: 474 QKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGD 533
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD M RN+ +W + ++ + GR + A+ F +++ G D ITF L A
Sbjct: 534 IDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYA 593
Query: 121 CSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS ++ G H + G +VD G+ + A +++ + ++ V
Sbjct: 594 CSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAV 653
Query: 179 SWCSML 184
W ++L
Sbjct: 654 VWVALL 659
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 337/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ ++ + FTFP + KA + G LH+L +K G HDV S +YS +G
Sbjct: 102 IRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+F+E+PER++ TW A S G+ + AID F + G PD L+A
Sbjct: 162 LNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L G + + N V LV+ Y KC ++ A+ VFD + +K+ V+W
Sbjct: 222 CVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTW 281
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N + G + FL +E ++P F I LS+CA + L+LG ++ +
Sbjct: 282 STMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N+F+ +AL+DMY KCG++ F +M E+++V NA I G A GH ++ +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F + + P+ T + +L C AG ++ G++ F +++ Y +K EHY C+VDL
Sbjct: 402 FGQTEKLGIS--PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GRAG++D AY +I +MPMRP VWGALL+ CR+ +L L L+P ++GN+
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNY 519
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN+++ +GRW+EA VR M G+KK G SWI ++ +H F A D SH + +I
Sbjct: 520 VQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIY 579
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L EM+ G++P T F +DVE+EEK +GHHSEK+A+AFGLI+ G IR+
Sbjct: 580 AKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVV 639
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K IS I RE++VRDNNRFH F +G CSC+DYW
Sbjct: 640 KNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F N+ +N I+ V +D F+++R+ G TF L AC+ S
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+LG LH +V+ GF+ +V+ L+ Y + A VF+ I +++ V+W ++
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y + +F GV P + I VLSAC + L+ G + + ++ N
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
FV + LV++Y KCG ++ A F+ M E+++V W+ +I GYA + F +M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ ++V LS+C+ GA++ G + S+ ++ ++D+ + G
Sbjct: 307 ENLK--PDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 367 VDRAYEIIKEMPMRPTISVWGAL 389
+ R +E+ KEM + + + A+
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAI 386
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/577 (42%), Positives = 353/577 (61%), Gaps = 6/577 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I P FT + ++L G+Q+H +LK G +V V + +Y++TG
Sbjct: 126 MRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 185
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
++ K+F MPE + +WN+ I R A+ F+N R G + + ITF + L+
Sbjct: 186 LNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLS 245
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-NDV 178
A S S +LG+Q+HG ++ + N L+ YGKC E+ + +F + ++ +DV
Sbjct: 246 AVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDV 305
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W SM+ Y+ N + + G FM ++VLSA A +A LE G VHA +
Sbjct: 306 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 365
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+AC+E ++ VGSALVDMY KCG + A FN MP RN WN++I GYA G + AL
Sbjct: 366 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 425
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M + + P++VT V VLSACS AG +E+G K F SM+ YG+ P EH++C+
Sbjct: 426 KLFANM-KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 484
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYG-KPELGRIAADNLFKLDPND 416
DLLGRAG +D+ + I +MP++P + +W +L AC R G K ELG+ AA+ LF+L+P +
Sbjct: 485 DLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 544
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLL NM+AA GRWE+ RK+MKD +KK AG SW+++K+ +H+F A D SH
Sbjct: 545 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDT 604
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI-PPGV 535
I L +L +M+ AGY+P T FALYD+E+E K + +HSEK+A+AF L A +
Sbjct: 605 DVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTL 664
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
PIRI KNLR+CGDCHSAFK+IS I GR++I+RD+NR+
Sbjct: 665 PIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 205/408 (50%), Gaps = 16/408 (3%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+++H + +G + V +G +MY+K G DA ++F M E++ +WN+ I+
Sbjct: 52 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A++ + ++RR P T + L++C+ +LG+Q+HG ++ G D NVS
Sbjct: 112 QNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 171
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM---LVVYVQNYEEENGCQMFLTAR 204
V N L+ Y + + + +F + + + VSW S+ L ++ E C FL A
Sbjct: 172 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVAC--FLNAL 229
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
R G + SSVLSA + ++ ELG+ +H +A+K + +AL+ YGKCG +
Sbjct: 230 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMD 289
Query: 265 DAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSS--FEEMTSMRCEAVPNYVTLVCV 321
E F++M E R+ V WN++I GY H AL F T R ++ Y T V
Sbjct: 290 GCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF-MYAT---V 345
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
LSA + +E+GM++ ++ +++ ++ + +VD+ + G +D A MP+R
Sbjct: 346 LSAFASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 404
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+ S W ++++ +G+ E N+ KLD +HV + +A
Sbjct: 405 SYS-WNSMISGYARHGQGEEALKLFANM-KLDGQTPPDHVTFVGVLSA 450
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 139/267 (52%), Gaps = 5/267 (1%)
Query: 127 LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ GR++HG ++ +G D V + NGLV+ Y KC + A+ VF +++K+ VSW SM+
Sbjct: 49 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
QN + + + RR + P F + S LS+CA + +LG+ +H ++K ++
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 168
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA-DMALSSFEEM 304
N+ V +AL+ +Y + G + + F+ MPE + V WN+IIG A + A++ F +
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF--L 226
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
++R N +T VLSA S E G +I + + LKY I A ++ G+
Sbjct: 227 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKYNIADEATTENALIACYGKC 285
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLN 391
G +D +I M R W ++++
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMIS 312
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 338/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN F + KA+ L V GK +H A+K+ + VG + DMY+K G
Sbjct: 242 MRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGY 301
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ +P ++ W+ IS + + A + F+ + R+ P+ + L A
Sbjct: 302 IEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQA 361
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L LG+Q+H +++ G++ + V N L+D Y KC + + +F + D N+VSW
Sbjct: 362 CANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSW 421
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V Y Q+ E+ +F R V SSVL ACA A ++ +H++ K
Sbjct: 422 NTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEK 481
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + V ++L+D Y KCG I+DA F + + ++V WNAII GYA G A AL
Sbjct: 482 STFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALEL 541
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + + PN VT V +LS C G V +G+ +F SMT+ + IKP +HY C+V L
Sbjct: 542 FNRMN--KSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRL 599
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A + I ++P P+ VW ALL++C V+ LG+ +A+ + +++P D +
Sbjct: 600 LGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTY 659
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+AA G ++ L+RK M+++G+KK G SW+ +K +H F H I
Sbjct: 660 VLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIIN 719
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GY+PD N L+DV+EEEK + HSE++ALA+GL PPG PIRI
Sbjct: 720 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 779
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+ FK IS IV RE++VRD NRFH F +G CSC DYW
Sbjct: 780 KNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 209/426 (49%), Gaps = 6/426 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++RE N F + K A+ P +HA A K G + FVG S D YS G
Sbjct: 141 LQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGA 200
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD + ++ TW A +S P++A++ F +R G +P+ + L A
Sbjct: 201 VSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S LG+ +HG V++ D V L+D Y KC + A+ VF+ I + + W
Sbjct: 261 AVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILW 320
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q+Y+ E +MFL R V P +F +S VL ACA +A L+LG+ +H + +K
Sbjct: 321 SFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIK 380
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +FVG+AL+D+Y KC +++++ F + + N V WN II GY G A+ ALS
Sbjct: 381 LGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSV 440
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + + VT VL AC+ +++ ++I +S+ K ++D
Sbjct: 441 FQEMRA--AHVLSTQVTFSSVLRACANTASIKHTVQI-HSLIEKSTFNNDTIVCNSLIDT 497
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD--PNDSG 418
+ G + A ++ + + +S W A+++ ++G+ + + K D PND
Sbjct: 498 YAKCGCIRDALKVFESIIQCDVVS-WNAIISGYALHGRATDALELFNRMNKSDTKPNDVT 556
Query: 419 NHVLLS 424
LLS
Sbjct: 557 FVALLS 562
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 5/351 (1%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +HA ++ G + D F ++Y+K G A ++FD MPERN+ ++ +
Sbjct: 66 GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
L G + A F L+R G E + L L +H + G D N
Sbjct: 126 ALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNA 185
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y C V A+ VFDGII K+ V+W +M+ Y +N E+ F R
Sbjct: 186 FVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMA 245
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F+++SVL A ++ LG+ +H AVK + VG AL+DMY KCG I+DA
Sbjct: 246 GAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDA 305
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F +P +++ W+ +I YA + A F M MR VPN +L VL AC+
Sbjct: 306 RTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM--MRSSVVPNEFSLSGVLQACA 363
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
++ G +I +++ +K G + ++D+ + ++ + EI + +
Sbjct: 364 NVAFLDLGQQI-HNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSL 413
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 130 GRQLHGFLVRSGFDGNVSV--CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
GR +H +V+ G + N L++ Y K + A+ +FDG+ ++N VS+ +++ Y
Sbjct: 66 GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
E +F +REG E F+++++L + L +HA A K + N
Sbjct: 126 ALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNA 185
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
FVGS+L+D Y CG++ A F+ + ++ V W A++ Y+ + AL++F +M
Sbjct: 186 FVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMA 245
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P +T V + C + + KG+ + +K ++D+ + G +
Sbjct: 246 GAKPNPFVLTSVLKAAVCLSSAVLGKGI---HGCAVKTLCDTEPHVGGALLDMYAKCGYI 302
Query: 368 DRAYEIIKEMPMRPTISVWGALLN 391
+ A + + +P I +W L++
Sbjct: 303 EDARTVFEIIPHDDVI-LWSFLIS 325
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/591 (39%), Positives = 349/591 (59%), Gaps = 15/591 (2%)
Query: 6 ISPNDFTFPC--------LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
++ + F PC L +S+ V G QLH +KSG V + + YSK
Sbjct: 3 LNSSAFFVPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSK 62
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
+ L D+ + F++ P+++ TW++ IS P +++ + PD +
Sbjct: 63 SQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSA 122
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+C S +G+ +H +++G+D +V V + LVD Y KC E+ A+ +FD + +N
Sbjct: 123 TKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNV 182
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W M+ Y Q E E +F A E + D+ S+V+S CA LELGR + +
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGL 242
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K+ + + FVGS+LV +Y KCG ++ A F+++P RNL WNA++ A H
Sbjct: 243 CIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKV 302
Query: 298 LSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
+ F+ M + M+ PN++T + VL+ACS AG V++G K ++ + + I+P +HYA
Sbjct: 303 IELFKRMKLSGMK----PNFITFLNVLNACSHAGLVDEG-KYYFDLMKESRIEPTDKHYA 357
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+VD+LGRAG ++ A EI+ MP+ PT SVWGALL +C ++ EL AAD +F+L P
Sbjct: 358 SLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPV 417
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
SG H+ LSN +AA GR+E+A RK ++D G KK G SW+ +N++H F A + HER
Sbjct: 418 SSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHER 477
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ EI L +L EEM+ AGY+ DT++ L +V+ +EK + +HSE++A+AFGLI P
Sbjct: 478 SKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADR 537
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+CGDCH+A KF+S R +IVRDNNRFHRF DG CSC+DYW
Sbjct: 538 PIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E ++ ND++F + + + G+Q+ L +KS FVG S +YSK G +
Sbjct: 211 ENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEG 270
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE+P RNL WNA + + I+ F ++ +G +P+ ITF LNACS
Sbjct: 271 AYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSWCS 182
L+ G+ + S + LVD G+ ++ A ++V + ID + W +
Sbjct: 331 AGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGA 390
Query: 183 MLV 185
+L
Sbjct: 391 LLT 393
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/532 (42%), Positives = 330/532 (62%), Gaps = 3/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLIT 113
Y+ G + A K+FDEMP R+ +WNA IS V G A+D F ++ ++ T
Sbjct: 139 YANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFT 198
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L A + S L+ G+++HG+L+RSG + + V L+D YGKC + A+ +FD +
Sbjct: 199 LSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA 258
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
DK+ VSW +M+ ++ ++ G +F GV P ++ + VL+ACA +A ++G+
Sbjct: 259 DKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKE 318
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + F SALV +Y KCG+ + A FN+MP +LV W ++I GYA G
Sbjct: 319 VHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQ 378
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
DMAL FE + +R P+ +T V VLSAC+ AG V+ G++ F+S+ K+G+ A+H
Sbjct: 379 PDMALQFFESL--LRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADH 436
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YACV+DLL R+G A II MPM+P +W +LL CR++G EL AA LF+L+
Sbjct: 437 YACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELE 496
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + ++ LSN++A G W E VR +M + GI K G SWI +K ++H+F DTSH
Sbjct: 497 PENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSH 556
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ ++I L +L ++MK GY+ DTNF L+DVEEE+K + +HSEK+A+AFG+I+ P
Sbjct: 557 PKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSP 616
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
G PI++ KNLR C DCH+A K+IS IV R++IVRD+NRFH F DG CSC DY
Sbjct: 617 GTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H ++SG D V + D+Y K G ++A +FD+M ++++ +W I
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR K F +L +G P+ TF LNAC+D + Q+G+++HG++ R G+D
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV Y KC A+ VF+ + + VSW S++V Y QN + + Q F + R G
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394
Query: 209 EPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P + VLSAC +++G H+V K + + ++D+ + G ++AE
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAE 454
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
+ MP + + W +++GG G+ ++A + + + + E Y+TL
Sbjct: 455 NIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITL 506
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 152/353 (43%), Gaps = 40/353 (11%)
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
R K A+D + +P + + AC L+LG+++H S F + + N
Sbjct: 47 RLKEAVDYLHRI----PQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISN 102
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y KC + A+++FD I K+ SW +M+ Y E ++F
Sbjct: 103 RLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFS 162
Query: 211 KDFMISSVLSACARIAGLEL--------------------------------GRSVHAVA 238
+ +IS +S + L+L G+ +H
Sbjct: 163 WNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYL 222
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+++ +E + V +AL+D+YGKCGS+ +A F++M ++++V W +I G
Sbjct: 223 IRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGF 282
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S F ++ M PN T VL+AC+ A + G ++ MT + G P + + +V
Sbjct: 283 SLFRDL--MGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMT-RVGYDPFSFAASALV 339
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ + G + A + +MP RP + W +L+ G+P++ ++L +
Sbjct: 340 HVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN++TF + A + L GK++H + G F + +YSK G + A
Sbjct: 293 VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETAR 352
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F++MP +L +W + I G+P A+ F +L R+G +PD ITF L+AC+
Sbjct: 353 RVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAG 412
Query: 126 LLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSM 183
L+ +G + H + G ++D + A+ + D + K D W S+
Sbjct: 413 LVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASL 472
Query: 184 L 184
L
Sbjct: 473 L 473
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/581 (40%), Positives = 331/581 (56%), Gaps = 35/581 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +T+PC+ KASS G Q+HA ++ G +VFVG MY K G +A
Sbjct: 133 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 192
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ D+MP R++ +WN+ ++ G+ +A++ + G +PD T + L A ++
Sbjct: 193 RVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 252
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L + V K +F + +K+ VSW M+
Sbjct: 253 L---------------------------------DNVSFVKEMFMKLANKSLVSWNVMIA 279
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
VY+ N +FL V+P I+SVL AC ++ L LGR +H V+ ++
Sbjct: 280 VYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQP 339
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +AL+DMY KCG ++ A F++M R++V W ++I Y G A+S F M
Sbjct: 340 NLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQ 399
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ + V VLSACS AG +++G F MT + I P EH+ C+VDLLGRAG
Sbjct: 400 DLGLN--PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAG 457
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
VD AY IK+MPM P VWGALL+ACRVY +G +AAD LF+L P SG +VLLSN
Sbjct: 458 QVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSN 517
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A GRWE+ VR MK GIKK G S + NR+H F A D SH ++ +I L
Sbjct: 518 IYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDV 577
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+MK AGY+P+T+ AL+DVEEE+K + HSEK+A+AF ++ PG PIRITKNLR+
Sbjct: 578 SVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRV 637
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH A K IS IVGRE+ +RD NRFH F++G CSC DYW
Sbjct: 638 CGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 131 RQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++LH + + N S+ L+ Y C E + +FD I KN V + M+ YV
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N+ + +F G++P + VL A + L +G +HA V+ ++ N+FV
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+ L+ MYGKCG + +A ++MP R++V WN+++ G A G D AL +EM +
Sbjct: 175 GNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 234
Query: 310 EAVPNYVTLVCVLSACS 326
+ P+ T+ +L A +
Sbjct: 235 K--PDAGTMASLLPAVT 249
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+ + + A L + G+++H ++ ++ + + DMY+K G
Sbjct: 297 MEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGC 356
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD+M R++ +W + IS + G+ ++A+ F ++ G PD I F + L+A
Sbjct: 357 LEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 416
Query: 121 CSDCSLLQLGR 131
CS LL GR
Sbjct: 417 CSHAGLLDEGR 427
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/581 (39%), Positives = 338/581 (58%), Gaps = 7/581 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A + L G+ + A +G DVFV S +Y++ G DA K+
Sbjct: 106 PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKV 165
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F MP R+ TW+ ++ V G+P +AI + +R G + D + + AC+ +
Sbjct: 166 FVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNV 225
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG L+R G +V LVD Y K + +A VF ++ +NDVSW +M+ +
Sbjct: 226 RMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN + + ++F + G++P + S L AC+ I L+LGRSVH V+ + N
Sbjct: 286 AQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNC 344
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--T 305
+G+A +DMY KCGS+ A++ FN + +R+L+ WNA+I G AL+ F+EM T
Sbjct: 345 ILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNET 404
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
MR P++ T +LSA S +G VE+G F M + I P +HY C+VDLL R+G
Sbjct: 405 GMR----PDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSG 460
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
LV+ A +++ M PT+++W ALL+ C K ELG ADN+ +L P+D G L+SN
Sbjct: 461 LVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSN 520
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++AAT +W++ VRK MKD G KK GCS I ++ H+F +D SH + EI + + K
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAK 580
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L EM+ GYIP T F +D+EEE K ++ +HSE++A+AFGL+ PG + I KNLR+
Sbjct: 581 LDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRV 640
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH A K+IS I RE++VRD RFH F DG CSC DYW
Sbjct: 641 CGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + ++ + +A +A G +H L+ G DV S DMY+K GL
Sbjct: 200 MREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGL 259
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M RN +W+A IS G+ A+ F N++ +G +PD + L A
Sbjct: 260 LDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLA 319
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ L+LGR +HGF+VR FD N + +D Y KC + A+++F+ I D++ + W
Sbjct: 320 CSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILW 378
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-----LGRSVH 235
+M+ + ++ +F G+ P +S+LSA + +E GR V+
Sbjct: 379 NAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVN 438
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGG 287
+ + + LVD+ + G +++A M E + W A++ G
Sbjct: 439 HFKITPAEKHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 198/453 (43%), Gaps = 41/453 (9%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-LKDDADKMFDEMPERNLATWNAYISNA 86
T +LHAL + S + A Y++ G L + ++A WNA I+
Sbjct: 26 TLARLHALLIVSSSASHTLISSLA-AAYARAGDLAAAESTLTATAASSSIAAWNAIIAAH 84
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G P +A+ F L PD TF L+AC+ L+ G + +G+ +V
Sbjct: 85 SRRGSPASALRVFRAL-PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC+ L+ Y + +G A VF + ++ V+W +M+ +V + + QM+ R +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV+ + ++ V+ AC + +G SVH ++ + ++ ++LVDMY K G + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M RN V W+A+I G+A G +D AL F M + + P+ LV L ACS
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQ--PDSGALVSALLACS 321
Query: 327 RAGAVEKGMKIF-----------------YSMTLKYGIKPGAEHYACVV---DLL----- 361
G ++ G + M K G A+ ++ DL+
Sbjct: 322 NIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381
Query: 362 -------GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI---AADNLFK 411
GR ++ + E MRP + + +LL+A G E G++ N FK
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ P + ++V L ++ A +G EEA + MK
Sbjct: 442 ITPAEK-HYVCLVDLLARSGLVEEASDLLTSMK 473
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/589 (40%), Positives = 348/589 (59%), Gaps = 7/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I N T + L T +H +K G D+FV + +MY+K G
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K F +M ++ +WN+ I+ P A F+ ++ G +PDL+T + +
Sbjct: 367 LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASI 426
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ + R +HGF++R G+ +V + N +VD Y K + A VF+ I K+ +S
Sbjct: 427 VAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVIS 486
Query: 180 WCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +++ Y QN +++ + + + P S+L A A + L+ G +H
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 546
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K + ++FV + L+D+YGKCG + DA F ++P+ + V WNAII + GHA+ L
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F EM E V P++VT V +LSACS +G VE+G F M +YGIKP +HY C+
Sbjct: 607 KLFGEMLD---EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCM 662
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG ++ AY+ IK+MP++P S+WGALL ACR++G ELG+ A+D LF++D +
Sbjct: 663 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VLLSN++A G+WE D VR ++ G+KK G S I V ++ +F + SH +
Sbjct: 723 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCK 782
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI L L +MK+ GYIPD +F L DVEE+EK + HSE++A+AFG+I+ PP PI
Sbjct: 783 EIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPI 842
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+CGDCH+A KFIS I RE++VRD+NRFH F DG CSC DYW
Sbjct: 843 RIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 226/458 (49%), Gaps = 19/458 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFP + KA L V G+++H A K G +VFV S MYS+ G A
Sbjct: 214 IRPDFYTFPPVLKACGTL---VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 270
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R++ +WNA IS + G A+D +R G + + +T + L C
Sbjct: 271 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG 330
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ +H ++++ G + ++ V N L++ Y K + A+ F + + VSW S++
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIA 390
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVE 244
Y QN + F+ + G +P + S+ S A+ + RSVH + + +
Sbjct: 391 AYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLM 450
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ +G+A+VDMY K G + A F +P ++++ WN +I GYA G A A+ ++ M
Sbjct: 451 EDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMM 510
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ E +PN T V +L A + GA+++GMKI + +K + C++D+ G+
Sbjct: 511 EECK-EIIPNQGTWVSILPAYAHVGALQQGMKI-HGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF--KLDPNDSGNHVL 422
G + A + ++P +++ W A+++ ++G E LF LD +HV
Sbjct: 569 GRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAE----KTLKLFGEMLDEGVKPDHVT 623
Query: 423 LSNMFAA---TGRWEEADLVRKEMKDVGIK---KGAGC 454
++ +A +G EE + M++ GIK K GC
Sbjct: 624 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 186/392 (47%), Gaps = 28/392 (7%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
DF F LF +S+ K LHAL + +G++ +F+ ++Y+ G + FD
Sbjct: 121 DFNF--LFDSSTKTPF---AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQ 128
++P++++ WN+ IS V G AI F L PD TF L AC L
Sbjct: 176 QIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LV 232
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GR++H + + GF NV V L+ Y + G+A+ +FD + ++ SW +M+ +
Sbjct: 233 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN + R EG++ + S+L C ++ + +H +K +E ++F
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLF 352
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY--------AHQGHADMALSS 300
V +AL++MY K G+++DA AF +M ++V WN+II Y AH M L+
Sbjct: 353 VSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNG 412
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ P+ +TLV + S +++ + + + + + VVD+
Sbjct: 413 FQ----------PDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDM 462
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ GL+D A+++ + +P++ IS W L+
Sbjct: 463 YAKLGLLDSAHKVFEIIPVKDVIS-WNTLITG 493
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 335/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN F + KA+ L V GK +H A+K+ + VG + DMY+K G
Sbjct: 254 MRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA F+ +P ++ + IS + + A + F+ L R+ P+ + + L A
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L G+Q+H ++ G + ++ V N L+DFY KCN++ + +F + D N+VSW
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V + Q+ E +F + + SSVL ACA A + +H K
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +G++L+D Y KCG I+DA F + ER+++ WNAII GYA G A AL
Sbjct: 494 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 553
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M E+ N +T V +LS CS G V G+ +F SM + +GIKP EHY C+V L
Sbjct: 554 FDRMNKSNVES--NDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A + I ++P P+ VW ALL++C ++ LGR +A+ + +++P D +
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 671
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+AA G ++ L+RK M+++G++K G SW+ +K IH F H I
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVIN 731
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GYIPD N L+DV++E+K + HSE++ALA+GL+ PPG PIRI
Sbjct: 732 AMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRIL 791
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+AF IS IV RE+IVRD NRFH F DG CSC DYW
Sbjct: 792 KNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 16/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E N F + K + A+ +H+ A K G H+ FVG D YS L
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F+ + ++ W A +S P+NA F +R +G +P+ + L A
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LG+ +HG +++ D V L+D Y KC ++ A++ F+ +I +DV
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE-MIPYDDVIL 331
Query: 181 CSMLVV-YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
S ++ Y Q+ + E ++FL R V P ++ +SSVL AC + L+ G+ +H A+
Sbjct: 332 LSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI 391
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E ++FVG+AL+D Y KC + + F+ + + N V WN I+ G++ G + ALS
Sbjct: 392 KIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALS 451
Query: 300 SFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F EM + M C VT VL AC+ ++ +I S+ K +
Sbjct: 452 VFCEMQAAQMPC----TQVTYSSVLRACASTASIRHAGQIHCSIE-KSTFNNDTVIGNSL 506
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+D + G + A ++ + + R IS W A+++ ++G+ AAD L D +
Sbjct: 507 IDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISGYALHGQ------AADALELFDRMNK 559
Query: 418 GN 419
N
Sbjct: 560 SN 561
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 156/326 (47%), Gaps = 9/326 (2%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +H ++ G + D+F +MY K G A ++FD MPERN+ ++ +
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + A F LR G E + L L +H + G D N
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V +GL+D Y C+ V A+ VF+GI+ K+ V W +M+ Y +N EN ++F R
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F ++SVL A + + LG+ +H A+K + VG AL+DMY KCG I+DA
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+AF +P +++ + +I YA + A F + MR +PN +L VL AC+
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL--MRSSVLPNEYSLSSVLQACT 375
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAE 352
++ G +I + IK G E
Sbjct: 376 NMVQLDFGKQIH-----NHAIKIGHE 396
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/589 (40%), Positives = 348/589 (59%), Gaps = 7/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I N T + L T +H +K G D+FV + +MY+K G
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K F +M ++ +WN+ I+ P A F+ ++ G +PDL+T + +
Sbjct: 367 LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASI 426
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ + R +HGF++R G+ +V + N +VD Y K + A VF+ I+ K+ +S
Sbjct: 427 VAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVIS 486
Query: 180 WCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +++ Y QN +++ + + + P S+L A A + L+ G +H
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K + ++FV + L+D+YGKCG + DA F ++P+ + V WNAII + GHA+ L
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F EM E V P++VT V +LSACS +G VE+G F M +YGIKP +HY C+
Sbjct: 607 KLFGEMLD---EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCM 662
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG ++ AY IK+MP++P S+WGALL ACR++G ELG+ A+D LF++D +
Sbjct: 663 VDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VLLSN++A G+WE D VR ++ G+KK G S I V ++ +F + SH +
Sbjct: 723 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCK 782
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI L L +MK+ GYIPD +F L DVEE+EK + HSE++A+AFG+I+ PP PI
Sbjct: 783 EIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPI 842
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+CGDCH+A KFIS I RE++VRD+NRFH F DG CSC DYW
Sbjct: 843 RIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 225/458 (49%), Gaps = 19/458 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFP + KA L V G+++H A K G +VFV S MYS+ G A
Sbjct: 214 IRPDFYTFPPVLKACGTL---VDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 270
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R++ +WNA IS + G A+D +R G + + +T + L C
Sbjct: 271 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG 330
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ +H ++++ G + ++ V N L++ Y K + A+ F + + VSW S++
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIA 390
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVE 244
Y QN + F+ + G +P + S+ S A+ + RSVH + + +
Sbjct: 391 AYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLM 450
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ +G+A+VDMY K G + A F + ++++ WN +I GYA G A A+ ++ M
Sbjct: 451 EDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMM 510
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ E +PN T V +L A + GA+++GM+I + +K + C++D+ G+
Sbjct: 511 EECK-EIIPNQGTWVSILPAYAHVGALQQGMRI-HGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF--KLDPNDSGNHVL 422
G + A + ++P +++ W A+++ ++G E LF LD +HV
Sbjct: 569 GRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAE----KTLKLFGEMLDEGVKPDHVT 623
Query: 423 LSNMFAA---TGRWEEADLVRKEMKDVGIK---KGAGC 454
++ +A +G EE + M++ GIK K GC
Sbjct: 624 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 186/392 (47%), Gaps = 28/392 (7%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
DF F LF +S+ K LHAL + +G++ +F+ ++Y+ G + FD
Sbjct: 121 DFNF--LFDSSTKTPF---AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQ 128
++P++++ TWN+ IS V G AI F L PD TF L AC L
Sbjct: 176 QIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LV 232
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GR++H + + GF NV V L+ Y + G+A+ +FD + ++ SW +M+ +
Sbjct: 233 DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN + R EG++ + S+L C ++ + +H +K +E ++F
Sbjct: 293 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLF 352
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY--------AHQGHADMALSS 300
V +AL++MY K G+++DA AF +M ++V WN+II Y AH M L+
Sbjct: 353 VSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNG 412
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ P+ +TLV + S +++ + + + + + VVD+
Sbjct: 413 FQ----------PDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDM 462
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ GL+D A+++ + + ++ IS W L+
Sbjct: 463 YAKLGLLDSAHKVFEIILVKDVIS-WNTLITG 493
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 348/595 (58%), Gaps = 11/595 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P +FPC KA S+L +GKQ H A G D+FV + MYS G
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF------ 114
+DA K+FDE+P+R++ +W + I L G +A+ F +L + D F
Sbjct: 127 LEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE--VGLAKVVFDGI 172
+ ++ACS L +H F+++ GFD VSV N L+D Y K E V +A+ +FD I
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACARIAGLELG 231
+DK+ VS+ S++ VY Q+ ++F + + V +S+VL A + L +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ +H ++ +E ++ VG++++DMY KCG ++ A AF++M +N+ W A+I GY
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GHA AL F M PNY+T V VL+ACS AG +G + F +M ++G++PG
Sbjct: 367 GHAAKALELFPAMIDSGVR--PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGRAG + +AY++I+ M M+P +W +LL ACR++ EL I+ LF+
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LD ++ G ++LLS+++A GRW++ + VR MK+ G+ K G S + + +H+F D
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H + +I L +L ++ AGY+ +T+ +DV+EEEK + HSEK+A+AFG++
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG + + KNLR+C DCH+ K IS IV RE +VRD RFH F DG CSC DYW
Sbjct: 605 VPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 11/331 (3%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
++ +WN+ I++ G A+ AF ++R+ P +F + ACS + G+Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G+ ++ V + L+ Y C ++ A+ VFD I ++ VSW SM+ Y N
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159
Query: 195 NGCQMFLTARREGVEPKDFM------ISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ +F + + D M + SV+SAC+R+ L S+H+ +K + +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 249 VGSALVDMYGKCGS--IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
VG+ L+D Y K G + A F+++ +++ V +N+I+ YA G ++ A F +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ N +TL VL A S +GA+ G K + ++ G++ ++D+ + G
Sbjct: 280 NKV-VTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V+ A + M + + W A++ ++G
Sbjct: 338 VETARKAFDRMKNK-NVRSWTAMIAGYGMHG 367
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 55/339 (16%)
Query: 167 VVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+F+ +DK DV SW S++ ++ + F + R+ + P + AC+ +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+ G+ H A + +IFV SAL+ MY CG ++DA F+++P+R++V W ++I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMI 149
Query: 286 GGYAHQGHADMALSSFEEMTSMRCE----AVPNYVTLVCVLSACSRAGAVEKGM-KIFYS 340
GY G+A A+S F+++ + + + LV V+SACSR A KG+ + +S
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA--KGLTESIHS 207
Query: 341 MTLKYGIKPGAE---------------------------------HYACVVDLLGRAGLV 367
+K G G Y ++ + ++G+
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 368 DRAYEIIKEMPMRPTIS----VWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GNH 420
+ A+E+ + + ++ +L A G +G+ D + ++ D G
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
++ +M+ GR E A MK+ ++ SW ++
Sbjct: 328 II--DMYCKCGRVETARKAFDRMKNKNVR-----SWTAM 359
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 344/560 (61%), Gaps = 4/560 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYSKTG 59
++R + P+ + L K + L G+ +HA + S + + V + +MY+K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DDA +MFDEMP +++ TW A I+ RP++A+ F + R G +P+ T + L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L G QLH F ++ G+ +V V + LVD Y +C + A++ FDG+ K++VS
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ + + E E+ + +R+ +P F SSV SACA I LE G+ VHA +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ ++ F+G+ L+DMY K GSI DA+ F+++ + ++V WN ++ G A G L
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE+M +R PN ++ +CVL+ACS +G +++G+ ++ + KY ++P HY VD
Sbjct: 378 RFEQM--LRIGIEPNEISFLCVLTACSHSGLLDEGL-YYFELMKKYKVEPDVPHYVTFVD 434
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR GL+DRA I+EMP+ PT +VWGALL ACR++ ELG AA+ F+LDP+DSG
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+LLSN++A+ GRW + VRK MK+ G+KK CSW+ ++N +H+F A D +H + EI
Sbjct: 495 RMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEI 554
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ ++ ++K GY+PDT+ L V+++E+ ++ +HSEK+ALAF L+ P G PIRI
Sbjct: 555 RGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRI 614
Query: 540 TKNLRICGDCHSAFKFISGI 559
KN+R+CGDCH+A KF+S I
Sbjct: 615 KKNIRVCGDCHAAIKFVSKI 634
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 337/587 (57%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+DFTF + AS L G+Q+H +K+ I +VFVG + D YSK
Sbjct: 232 MQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDC 291
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ K+F+EMPE + ++N I+ G+ K +ID F L+ T + F L+
Sbjct: 292 VNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSI 351
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LQ+GRQLH +V S D + V N LVD Y KC + A +F + ++ V W
Sbjct: 352 AASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPW 411
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ VQ ENG ++F RR V + VL A A +A + LG+ +H+ ++
Sbjct: 412 TAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIR 471
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N++ G AL+DMY C SI+DA F +M ERN+V WNA++ YA G L S
Sbjct: 472 SGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKS 530
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + P+ V+ +C+L+ACS VE+G+K F M+ Y + P EHY +VD
Sbjct: 531 FEEMIMSGYQ--PDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDA 588
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGN 419
L R+G D A +++ +MP P VW ++LN+CR++ L R AA LF + D+
Sbjct: 589 LCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAP 648
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V +SN+FA G+W+ V+K M+D G++K SW+ +K+++H+F A D H + EI
Sbjct: 649 YVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEI 708
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L E+M+ GY PD + A +V++E K+ + +HSE++A+AF LI P G PI +
Sbjct: 709 LRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILV 768
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+A K IS IVGRE+ VRD+NRFH F DG CSC DYW
Sbjct: 769 MKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 185/392 (47%), Gaps = 5/392 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ T+ L + L + Q HA +K G + V + D Y KTG
Sbjct: 131 MHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F EM + ++N I+ G + AI+ F+ ++ G +P TF A ++A
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
G+Q+HGF+V++ F NV V N +DFY K + V + +F+ + + + VS+
Sbjct: 251 SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSY 310
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y + + +F + + K+F ++LS A L++GR +HA V
Sbjct: 311 NVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVV 370
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + V ++LVDMY KCG ++A+ F ++ R+ V W A+I +G + L
Sbjct: 371 SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKL 430
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM R + T CVL A + ++ G K +S ++ G ++D+
Sbjct: 431 FYEMR--RANVSADQATFACVLKASANLASILLG-KQLHSCVIRSGFM-NVYSGCALLDM 486
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ A + +EM R ++ W ALL+A
Sbjct: 487 YANCASIKDAIKTFEEMSERNVVT-WNALLSA 517
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 208/470 (44%), Gaps = 35/470 (7%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K+G A ++FD+ ER + W I R +A F + R+G +PD +T+
Sbjct: 84 YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTY 143
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L C+D + + Q H +V+ G N VCN L+D Y K + A+ +F +
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ VS+ M+ Y N E ++F+ + G +P DF ++V+SA + G+ +
Sbjct: 204 WDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK N+FVG+A +D Y K + + FN+MPE + V +N II YA G
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV 323
Query: 295 DMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
++ F+E+ T+ + P +LS + + ++ G ++ + + P
Sbjct: 324 KESIDLFQELQFTTFDRKNFP----FPTMLSIAASSLDLQMGRQLHAQVVVSMA-DPDFR 378
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+VD+ + G + A I + R T+ W A+++A G E G + +
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP-WTAMISANVQRGLHENGLKLFYEMRR- 436
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG-----AGCSWI-------SVK 460
N S + + + A+ L+ K++ I+ G +GC+ + S+K
Sbjct: 437 -ANVSADQATFACVLKASANLASI-LLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIK 494
Query: 461 NRIHIFQ-----------AKDTSHERNTEIQAMLTKLREEMKAAGYIPDT 499
+ I F+ A +++ +N + + L EEM +GY PD+
Sbjct: 495 DAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSF-EEMIMSGYQPDS 543
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 157/391 (40%), Gaps = 50/391 (12%)
Query: 89 GGRPKNAIDAFINLR--RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV-RSGFDGN 145
G + + I+ R +TG +P F + S+ L RQL + R+ F +
Sbjct: 19 GASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSID 78
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ ++ Y K + +A+ +FD ++ V+W +M+ Y ++ + ++F R
Sbjct: 79 I-----IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHR 133
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P ++L+ C + + HA VK N V + L+D Y K G +
Sbjct: 134 SGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDS 193
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F +M + V +N +I GYA+ G + A+ F EM ++ + P+ T V+SA
Sbjct: 194 ARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFK--PSDFTFAAVISAS 251
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
G +I + +K +D + V+ ++ EMP +S
Sbjct: 252 VGLDDTAFGQQI-HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVS- 309
Query: 386 WGALLNACRVYGK-----------------------PELGRIAADNL------------- 409
+ ++ A GK P + IAA +L
Sbjct: 310 YNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVV 369
Query: 410 -FKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
DP+ ++ L+ +M+A G++EEAD +
Sbjct: 370 VSMADPDFRVSNSLV-DMYAKCGKFEEADRI 399
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 342/588 (58%), Gaps = 6/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + P+ T+ + A +L GKQ+HA ++S DV V + MY K G
Sbjct: 221 MLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGA 280
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ + R++ WN I V G+ + A F + G PD T+ L+A
Sbjct: 281 FKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSA 340
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+++H + G +V N L++ Y K + A+ VFD + ++ VSW
Sbjct: 341 CARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSW 400
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++L Y + F ++GV+ VL AC+ L+ G+ +HA VK
Sbjct: 401 TTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVK 460
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ V +AL+ MY KCGS++DA F M R++V WN +IGG G AL
Sbjct: 461 AGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQR 520
Query: 301 FEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+E M S MR PN T V VLSAC VE+G + F M+ YGI P +HYAC+V
Sbjct: 521 YEVMKSEGMR----PNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMV 576
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
D+L RAG + A ++I +P++P+ ++WGALL ACR++ E+G AA++ KL+P ++G
Sbjct: 577 DILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAG 636
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+V LS ++AA G W + +RK MK+ G+KK G SWI + +H F A+D SH R E
Sbjct: 637 LYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQE 696
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I A L L+++MK+ GY+PDT F ++D+++E K V HHSEK+A+A+GLI+ PPG PIR
Sbjct: 697 IYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIR 756
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I+KNLR+C DCH+A KFIS I RE+I RD +RFH F +G CSC DYW
Sbjct: 757 ISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 230/483 (47%), Gaps = 55/483 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + P+ FTF + A S+ + G+++H +++G +D VG + MY+K G
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R+ +W G + ++ + + + P IT+ L+A
Sbjct: 180 VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSA 239
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + L+ G+Q+H +V S + +V V L Y KC A+ VF+ + ++ ++W
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +V + + E F EGV P ++VLSACAR GL G+ +HA A K
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ G+AL++MY K GS++DA F++MP+R++V W ++G YA + ++
Sbjct: 360 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTT 419
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACS---------------------------------- 326
F++M +A N +T +CVL ACS
Sbjct: 420 FKQMLQQGVKA--NKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMY 477
Query: 327 -RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA---YEIIKEMPMRPT 382
+ G+VE +++F M+++ + + ++ LG+ G A YE++K MRP
Sbjct: 478 FKCGSVEDAIRVFEGMSMRDVVT-----WNTLIGGLGQNGRGLEALQRYEVMKSEGMRPN 532
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG------NHVLLSNMFAATGRWEEA 436
+ + +L+ACRV E GR F D G ++ + ++ A G EA
Sbjct: 533 AATFVNVLSACRVCNLVEEGR----RQFAFMSKDYGIVPTEKHYACMVDILARAGHLREA 588
Query: 437 DLV 439
+ V
Sbjct: 589 EDV 591
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 190/362 (52%), Gaps = 4/362 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+H L+ G +V++ + +Y+ G ++A ++FD+ +++ +WN IS
Sbjct: 47 GKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAH 106
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A + F +++ EPD TF + L+ACS ++L GR++H ++ +G + +V
Sbjct: 107 RGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTV 166
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC V A+ VFD + +++VSW ++ Y ++ E + + +E V
Sbjct: 167 GNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERV 226
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +VLSAC +A LE G+ +HA V++ ++ V +AL MY KCG+ +DA
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F + R+++ WN +I G+ G + A +F M + P+ T VLSAC+R
Sbjct: 287 VFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM--LEEGVAPDRATYTTVLSACARP 344
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + +G +I ++ K G+ ++++ +AG + A ++ MP R +S W
Sbjct: 345 GGLARGKEI-HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS-WTT 402
Query: 389 LL 390
LL
Sbjct: 403 LL 404
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 2/241 (0%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D L R G + D + L +C L +G+Q+H ++R G NV + N L+ Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
C V A+ +FD +K+ VSW M+ Y + +F ++E +EP F
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
S+LSAC+ A L GR +H ++A + + VG+AL+ MY KCGS++DA F+ M R
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+ V W + G YA G+ + +L ++ M R P+ +T + VLSAC A+EKG +
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR--PSRITYMNVLSACGSLAALEKGKQ 251
Query: 337 I 337
I
Sbjct: 252 I 252
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/612 (38%), Positives = 338/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---- 63
PN +TFP L K+ + G+Q+H LK G D+FV S +Y + G +D
Sbjct: 132 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKV 191
Query: 64 ---------------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
A K+FDE+P +++ +WNA IS G K A+
Sbjct: 192 FDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T ++AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 252 ELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLY 311
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC E+ A +F+G++ K+ +SW +++ Y + +F R G P D +
Sbjct: 312 SKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTML 371
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGN--IFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K + ++L+DMY KCG I+ A FN +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G+A G AD A F M + E P+ +T V +LSACSR+G ++ G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE--PDDITFVGLLSACSRSGMLDLG 489
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF +MT Y I P EHY C++DLLG +GL A E+I M M P +W +LL AC+
Sbjct: 490 RHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACK 549
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ G ELG A NL K++P + G +VLLSN++A GRW E +R + D G+KK GC
Sbjct: 550 IRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 609
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 610 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGA 669
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 730 FRDGVCSCNDYW 741
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 195/416 (46%), Gaps = 51/416 (12%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E NL WN L P +A+ ++ + G P+ TF L +C+
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------------- 170
+ G+Q+HG +++ G+D ++ V L+ Y + + A+ VFD
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206
Query: 171 -------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
G I+ K+ VSW +M+ Y + + ++F + + P +
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+SACA+ +ELGR VH+ N+ + ++L+D+Y KCG ++ A F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F+EM +R PN VT++ +L AC+ GA++
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEM--LRSGERPNDVTMLSILPACAHLGAID 384
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK + ++D+ + G ++ A+++ + + ++S W A++
Sbjct: 385 IGRWIHVYIDKRLKSATNASSLR-TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442
Query: 391 NACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSNMFAATGRWEEADLVR 440
++G+ + AA ++F ++P+D + + +A R DL R
Sbjct: 443 FGFAMHGRAD----AAFDIFSRMRKIGIEPDD----ITFVGLLSACSRSGMLDLGR 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 182/406 (44%), Gaps = 30/406 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P++ T + A + G+Q+H+ G ++ + S D+YSK G
Sbjct: 257 MMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGE 316
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 317 LETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPA 376
Query: 121 CSDCSLLQLGRQLHGFL---VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C+ + +GR +H ++ ++S + + S+ L+D Y KC ++ A VF+ I+ K+
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKSATNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
SW +M+ + + + +F R+ G+EP D +LSAC+R L+LGR +
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT 495
Query: 238 AVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ + + ++D+ G G ++AE N M E + V W +++ +G+ +
Sbjct: 496 MTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVE 555
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV--------EKGMK----------- 336
+ S + + + E YV L + + R V +KGMK
Sbjct: 556 LGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 615
Query: 337 -IFYSMTLKYGIKP-GAEHYACVVD---LLGRAGLVDRAYEIIKEM 377
+ + + P E Y + + LL +AG V E+++EM
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 142/305 (46%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIID 174
L+ +C LQ R +H ++++G + L++ + + A VF+ I +
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +M + + + + ++++ G+ P + +L +CA+ + G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K + ++FV ++L+ +Y + G ++DA F++ P R++V + A+I GYA +G+
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216
Query: 295 DMALSSFEEMT-----------------------------SMRCEAVPNYVTLVCVLSAC 325
+ A F+E+ M+ P+ T+V V+SAC
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++G++E G ++ +S +G + ++DL + G ++ A + + + + IS
Sbjct: 277 AQSGSIELGRQV-HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS- 334
Query: 386 WGALL 390
W L+
Sbjct: 335 WNTLI 339
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/613 (39%), Positives = 338/613 (55%), Gaps = 37/613 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP L K+ + L + G+Q+H LK G D++V S MY K G DA
Sbjct: 101 PNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKV 160
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
KMFDE+P +++ +WNA IS G K A+
Sbjct: 161 FDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEAL 220
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D F + +T +PD T ++AC+ +QLGRQ+H ++ G N+ + N L+D Y
Sbjct: 221 DLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLY 280
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F G+ +K+ +SW +M+ Y + +F R G P D +
Sbjct: 281 SKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTML 340
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS---ALVDMYGKCGSIQDAEIAFNKM 273
S+L ACA++ ++ GR +H V + ++G S +L+DMY KCG I+ A FN M
Sbjct: 341 SILPACAQLGAIDFGRWIH-VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
R L NA+I G+A G A+ A F M E P+ +T V +LSACS +G ++
Sbjct: 400 HHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE--PDDITFVGLLSACSHSGMLDL 457
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G +IF SMT Y I P EHY C++DLLG GL A E+I M M P +W +LL AC
Sbjct: 458 GRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKAC 517
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
+++G ELG A L K++P + G++VLLSN++A GRW E +R + D G+KK G
Sbjct: 518 KMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPG 577
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 578 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQG 637
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 574 RFWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 698 HFRDGVCSCNDYW 710
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 37/368 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E NL WN L P +AI ++ + G P+ TF L +C+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG------------ 171
+ + G+Q+HG +++ G++ ++ V L+ Y K A VFDG
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 172 -------------------IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
I K+ VSW +++ Y + +F + V+P +
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+SACA+ ++LGR VH+ + N+ + +AL+D+Y KCG ++ A F
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F+EM +R PN VT++ +L AC++ GA++
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEM--LRSGENPNDVTMLSILPACAQLGAID 353
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ +K G+ + ++D+ + G ++ A+++ M R T+S A++
Sbjct: 354 FGRWIHVYIDKRIK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHR-TLSACNAMI 411
Query: 391 NACRVYGK 398
++G+
Sbjct: 412 FGFAMHGR 419
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 12/348 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 226 MMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 286 VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPA 345
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + GR +H ++ + G S+ L+D Y KC ++ A VF+ + +
Sbjct: 346 CAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS 405
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
+ +M+ + + +F R+ G+EP D +LSAC+ L+LGR + ++
Sbjct: 406 ACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ G+ ++
Sbjct: 466 TQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVEL 525
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV--------EKGMK 336
S +++ + E +YV L + + R V +KGMK
Sbjct: 526 GESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMK 573
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 142/305 (46%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIID 174
L+ +C LQ R +H ++++G + L++F + + A VF+ I +
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +M + + + + ++++ G+ P + +L +CA++ + G+ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K E +++V ++L+ MY K G +DA F+ R++V + A+I GYA +G+
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185
Query: 295 DMALSSFEEM-----------------------------TSMRCEAVPNYVTLVCVLSAC 325
+ A F+E+ M+ P+ T+V V+SAC
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++G+++ G ++ +S +G+ + ++DL + G V+ A + + + + IS
Sbjct: 246 AQSGSIQLGRQV-HSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS- 303
Query: 386 WGALL 390
W ++
Sbjct: 304 WNTMI 308
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 340/560 (60%), Gaps = 4/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVG-CSAF-DMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
GK +HA +++G+ V C+A DMY K A ++FD + + ++ +W A I+
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY 303
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
+ + F+ + G P+ IT + + C L+LG+ LH F +R+GF ++
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+ +D YGKC +V A+ VFD K+ + W +M+ Y QN + +F+
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ P + + S+L CA+ LE+G+ +H+ K ++G++ + ++ VDMY CG I A
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA 483
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F + +R++ WNA+I G+A GH + AL FEEM ++ PN +T + L ACS
Sbjct: 484 HRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL--GVTPNDITFIGALHACS 541
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+G +++G ++F+ M ++G P EHY C+VDLLGRAGL+D A+E+IK MPMRP I+V+
Sbjct: 542 HSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVF 601
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
G+ L AC+++ +LG AA L+P+ SG +VL+SN++A+ RW + +R+ MKD
Sbjct: 602 GSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDE 661
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
GI K G S I V +H F D H ++ M+ ++RE+++ AGY PD + L+++
Sbjct: 662 GIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNI 721
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
++E+K++ + +HSEK+A+A+GLI+ PGVPIRI KNLR+C DCH+A K +S I GRE+IV
Sbjct: 722 DKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIV 781
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH F +G CSC DYW
Sbjct: 782 RDRNRFHHFKEGSCSCCDYW 801
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 213/424 (50%), Gaps = 16/424 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++F P + KA + + G+++H +K+G DVFV + MYS+ G
Sbjct: 115 MRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGS 174
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD++ +++ +W+ I + G A+D ++ +P I + +
Sbjct: 175 LALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHV 234
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGN--VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
++ + L+LG+ +H +++R+G G V +C L+D Y KC + A+ VFDG+ + +
Sbjct: 235 LAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASII 294
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y+ G ++F+ EG+ P + + S++ C LELG+ +HA
Sbjct: 295 SWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFT 354
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++ + +A +DMYGKCG ++ A F+ ++L+ W+A+I YA D A
Sbjct: 355 LRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAF 414
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F MT C PN T+V +L C++AG++E G K +S K GIK V
Sbjct: 415 DIFVHMTG--CGIRPNERTMVSLLMICAKAGSLEMG-KWIHSYIDKQGIKGDMILKTSFV 471
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------L 412
D+ G +D A+ + E R IS+W A+++ ++G E AA LF+ +
Sbjct: 472 DMYANCGDIDTAHRLFAEATDR-DISMWNAMISGFAMHGHGE----AALELFEEMEALGV 526
Query: 413 DPND 416
PND
Sbjct: 527 TPND 530
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 188/388 (48%), Gaps = 15/388 (3%)
Query: 9 NDFTFPCL--FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
N + P L ++ ++P ++LH ++ Q+H F+ S+ Y
Sbjct: 27 NQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIKTSSNCSYR-------VPL 79
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
E N A + I++ + P +A + +R T E D + L AC
Sbjct: 80 AALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPS 139
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
LG+++HGF+V++GF G+V VCN L+ Y + + LA+++FD I +K+ VSW +M+
Sbjct: 140 FLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRS 199
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK--ACVE 244
Y ++ + + V+P + + S+ A +A L+LG+++HA ++ C +
Sbjct: 200 YDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGK 259
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ + +AL+DMY KC ++ A F+ + + +++ W A+I Y H + + + F +M
Sbjct: 260 SGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKM 319
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
PN +T++ ++ C AGA+E G K+ ++ TL+ G +D+ G+
Sbjct: 320 LGE--GMFPNEITMLSLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKC 376
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNA 392
G V A + + + +W A++++
Sbjct: 377 GDVRSARSVFDSFKSK-DLMMWSAMISS 403
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 1/277 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN+ T L K GK LHA L++G + + + DMY K G
Sbjct: 319 MLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGD 378
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD ++L W+A IS+ A D F+++ G P+ T + L
Sbjct: 379 VRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMI 438
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L++G+ +H ++ + G G++ + VD Y C ++ A +F D++ W
Sbjct: 439 CAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMW 498
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ + + E ++F GV P D L AC+ L+ G R H +
Sbjct: 499 NAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVH 558
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+ + +VD+ G+ G + +A MP R
Sbjct: 559 EFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 343/617 (55%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ +TFP LFK + G+QLH LK G ++VFV + MY G
Sbjct: 130 MLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 189
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD P+ ++ TWN IS G+ + + F+ + P +T L+A
Sbjct: 190 LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSA 249
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
CS L+ G+++H ++ + N+ + N ++D Y C E
Sbjct: 250 CSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISW 309
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ +A+ FD + +K+ VSW +M+ Y+++ + ++F + V+
Sbjct: 310 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P +F + SVL+ACA + LELG + + ++ ++FV +AL+DMY KCG + AE
Sbjct: 370 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 429
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +M +R+ W A+I G A GH + AL F M ++ +P+ +T + VLSAC+ G
Sbjct: 430 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM--LKASILPDEITYIGVLSACTHTG 487
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V+KG K F MT ++GI+P HY C+VDLL RAG + AYE+I+ MP++ VWGAL
Sbjct: 488 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 547
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L CRVY + ++ + + +L+P++ +VLL N++AA RW + +R+ M D GIK
Sbjct: 548 LAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIK 607
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCS I + R+H F A D SH + I A L K+ +++K AGY PD + D+ EE
Sbjct: 608 KXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEE 667
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+K V HSEK+A+AFGLI PPGV IRITKNLR+C DCH+ K +S + REVIVRD
Sbjct: 668 DKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDR 727
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 728 TRFHHFKHGLCSCKDYW 744
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 173/379 (45%), Gaps = 35/379 (9%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE+PE NL WN I P+ + ++ + R G +PD TF +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GRQLHG +++ G NV V LV Y C ++ A+ VFD + ++W +
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y + + E ++FL + V P + VLSAC+++ L G+ VH+ V
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271
Query: 244 EGNIFVGSALVDMYGKCGSIQDA----------------------------EIA---FNK 272
E N+ + +A++DMY CG + A ++A F+K
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 331
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
MPE++ V W A+I GY AL F M + + P+ T+V VL+AC+ GA+E
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK--PDEFTMVSVLTACAHLGALE 389
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G I + + IK ++D+ + G VD+A I +EM R + W A++
Sbjct: 390 LGEWI-RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVG 447
Query: 393 CRVYGKPELGRIAADNLFK 411
V G E N+ K
Sbjct: 448 LAVNGHGEKALDMFSNMLK 466
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM--YGKCGSI 263
+ P + S+L C + L+ VH A+K + N + + ++ + G
Sbjct: 33 KSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 89
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
Q A F+++PE NL WN +I GY+ + +S + EM +R P+ T +
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM--LRRGVKPDRYTFPFLFK 147
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+R A+E G ++ + LK+G++ + +V + G +D A + P I
Sbjct: 148 GFTRDIALEYGRQL-HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 384 SVWGALLNACRVYGKPELGR 403
+ W +++A GK E R
Sbjct: 207 T-WNMIISAYNKVGKFEESR 225
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 343/617 (55%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ +TFP LFK + G+QLH LK G ++VFV + MY G
Sbjct: 109 MLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 168
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD P+ ++ TWN IS G+ + + F+ + P +T L+A
Sbjct: 169 LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSA 228
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
CS L+ G+++H ++ + N+ + N ++D Y C E
Sbjct: 229 CSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISW 288
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ +A+ FD + +K+ VSW +M+ Y+++ + ++F + V+
Sbjct: 289 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P +F + SVL+ACA + LELG + + ++ ++FV +AL+DMY KCG + AE
Sbjct: 349 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 408
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +M +R+ W A+I G A GH + AL F M ++ +P+ +T + VLSAC+ G
Sbjct: 409 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM--LKASILPDEITYIGVLSACTHTG 466
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V+KG K F MT ++GI+P HY C+VDLL RAG + AYE+I+ MP++ VWGAL
Sbjct: 467 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 526
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L CRVY + ++ + + +L+P++ +VLL N++AA RW + +R+ M D GIK
Sbjct: 527 LAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIK 586
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCS I + R+H F A D SH + I A L K+ +++K AGY PD + D+ EE
Sbjct: 587 KTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEE 646
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+K V HSEK+A+AFGLI PPGV IRITKNLR+C DCH+ K +S + REVIVRD
Sbjct: 647 DKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDR 706
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 707 TRFHHFKHGLCSCKDYW 723
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 173/379 (45%), Gaps = 35/379 (9%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE+PE NL WN I P+ + ++ + R G +PD TF +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GRQLHG +++ G NV V LV Y C ++ A+ VFD + ++W +
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y + + E ++FL + V P + VLSAC+++ L G+ VH+ V
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250
Query: 244 EGNIFVGSALVDMYGKCGSIQDA----------------------------EIA---FNK 272
E N+ + +A++DMY CG + A ++A F+K
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 310
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
MPE++ V W A+I GY AL F M + + P+ T+V VL+AC+ GA+E
Sbjct: 311 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK--PDEFTMVSVLTACAHLGALE 368
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G I + + IK ++D+ + G VD+A I +EM R + W A++
Sbjct: 369 LGEWI-RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVG 426
Query: 393 CRVYGKPELGRIAADNLFK 411
V G E N+ K
Sbjct: 427 LAVNGHGEKALDMFSNMLK 445
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM--YGKCGSI 263
+ P + S+L C + L+ VH A+K + N + + ++ + G
Sbjct: 12 KSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 68
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
Q A F+++PE NL WN +I GY+ + +S + EM +R P+ T +
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM--LRRGVKPDRYTFPFLFK 126
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+R A+E G ++ + LK+G++ + +V + G +D A + P I
Sbjct: 127 GFTRDIALEYGRQL-HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 384 SVWGALLNACRVYGKPELGR 403
+ W +++A GK E R
Sbjct: 186 T-WNMIISAYNKVGKFEESR 204
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/590 (40%), Positives = 350/590 (59%), Gaps = 9/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I+ + T + + L T +H +K G ++FV + +MY+K G
Sbjct: 264 MRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGN 323
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+F +M R++ +WN+ I+ P A F ++ G EPDL+T + +
Sbjct: 324 LGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASI 383
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ + R +HGF++R G+ V + N ++D Y K + A VF+ I K+ VS
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS 443
Query: 180 WCSMLVVYVQNYEEENGCQMFLTAR--REGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
W +++ Y QN +++ RE ++ S+L+A A + L+ G +H
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECRE-IKLNQGTWVSILAAYAHVGALQQGMRIHGH 502
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K + ++FVG+ L+D+YGKCG + DA F ++P + V WNAII + GH + A
Sbjct: 503 LIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKA 562
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F EM E V P++VT + +LSACS +G V++G K F+ + +YGIKP +HY C
Sbjct: 563 LKLFREMQD---EGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYGC 618
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG ++ AY+ IK+MP+ P S+WGALL ACR++G ELG+ A+D LF++D +
Sbjct: 619 MVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSEN 678
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G +VLLSN++A G+WE D VR ++ G+KK G S I V R+ IF + SH +
Sbjct: 679 VGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKC 738
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI A L L +MK+ GYIPD +F L DVEE+EK + HSE++A+AFG+I+ PP
Sbjct: 739 KEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSA 798
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+CGDCH+A KFIS I RE++VRD+ RFH F +G CSC DYW
Sbjct: 799 IRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 222/454 (48%), Gaps = 21/454 (4%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
+TFP + KA L V G+++H K G DVFV S MYS+ G A +FD+
Sbjct: 176 YTFPPVLKACQTL---VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDD 232
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
MP R++ +WNA IS + G A+D +R G D +T + L C+ +
Sbjct: 233 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA 292
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+H ++++ G + + V N L++ Y K +G A+ VF + ++ VSW S++ Y QN
Sbjct: 293 TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQN 352
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFV 249
+ F + G+EP + S+ S A+ + RSVH + + + + +
Sbjct: 353 DDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVI 412
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+A++DMY K G I A FN +P +++V WN +I GY G A A+ + M R
Sbjct: 413 GNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECR- 471
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
E N T V +L+A + GA+++GM+I + +K + C++DL G+ G +
Sbjct: 472 EIKLNQGTWVSILAAYAHVGALQQGMRI-HGHLIKTNLHLDVFVGTCLIDLYGKCGRLVD 530
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG---NHVLLSNM 426
A + ++P ++ W A+++ ++G E A LF+ + D G +HV ++
Sbjct: 531 AMCLFYQVPRESSVP-WNAIISCHGIHGHGE----KALKLFR-EMQDEGVKPDHVTFISL 584
Query: 427 FAA---TGRWEEADLVRKEMKDVGIK---KGAGC 454
+A +G +E M++ GIK K GC
Sbjct: 585 LSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC 618
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 189/391 (48%), Gaps = 10/391 (2%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R+ + F LF + + + K+LHAL + SG+I F+ ++Y+ G
Sbjct: 69 RQPAKNEEIDFNSLFDSCTK---TLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNAC 121
+ FD++ +++ TWN+ IS V G + AID F L T + D TF L AC
Sbjct: 126 LSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
L GR++H ++ + GF +V V L+ Y + VG+A+ +FD + ++ SW
Sbjct: 186 QT---LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWN 242
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ +QN + R EG+ ++S+L CA++ + +H +K
Sbjct: 243 AMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKH 302
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E +FV +AL++MY K G++ DA+ F +M R++V WN+II Y A F
Sbjct: 303 GLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M E P+ +TLV + S +++ + + + + + V+D+
Sbjct: 363 FKMQLNGLE--PDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMY 420
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G++D A+++ +P++ +S W L++
Sbjct: 421 AKLGVIDSAHKVFNLIPVKDVVS-WNTLISG 450
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 19/305 (6%)
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R + + I F + ++C+ L ++LH LV SG + + LV+ Y +V
Sbjct: 69 RQPAKNEEIDFNSLFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQN--YEEENGC--QMFLTARREGVEPKDFMISSVL 219
L++ FD I K+ +W SM+ YV+N + E C Q+ L + + + VL
Sbjct: 126 LSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTK---FQADFYTFPPVL 182
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
AC + GR +H K + ++FV ++L+ MY + G + A F+ MP R++
Sbjct: 183 KACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMG 239
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIF 338
WNA+I G G+A AL +E MR E + + VT+ +L C++ G + I
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDE---MRLEGINMDSVTVASILPVCAQLGDISTATLI- 295
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ +K+G++ ++++ + G + A ++ ++M +R +S W +++ A
Sbjct: 296 HLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVS-WNSIIAAYEQNDD 354
Query: 399 PELGR 403
P R
Sbjct: 355 PVTAR 359
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/564 (39%), Positives = 334/564 (59%), Gaps = 36/564 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G+ +A +F +MP +N A+W A I+ V + A++ I L R+G P +F
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV------------ 162
+ L+AC++ +++GR +H +++G N V NGL+ Y KC V
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 163 -----------GL--------AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
GL A+VVF+ + ++ VSW +++ YVQ E +FL
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
G++P ++S+LSAC + ++LG HA+ K + +FVG++L+ MY KCG
Sbjct: 679 LARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-Y 737
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVL 322
+D F +MPE +L+ WNA++ G A G A+ FE+M E + P+ ++ + VL
Sbjct: 738 EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQM---EVEGILPDQMSFLGVL 794
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
ACS AG V++G F SMT KYGI P HY C+VDLLGRAG + A +I+ MP++P
Sbjct: 795 CACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPD 854
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+W ALL ACR++ ELG+ A+ LF++ S +VLLSN+FA+ G W++ +RK
Sbjct: 855 SVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKL 914
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
MKD G+ K G SWI VKN++H F D +H++ EI + L + +A GY+PDTNF
Sbjct: 915 MKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFV 974
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
L+DVEEE+K E+ +HSEK+A+ FG+++ P G PI+I KNLRICGDCH+ KF+S + R
Sbjct: 975 LHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLR 1034
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
++I+RD NRFH F DG CSC DYW
Sbjct: 1035 KIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 44/424 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ F + A + L L +A+K+G DV VG + + Y++ G
Sbjct: 352 MCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGS 411
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A F+ MPERN +W I+ GR +D I L E + T A + A
Sbjct: 412 LDLAMHFFETMPERNEYSWTTMIAAFAQCGR----LDDAIQLYERVPEQTVATKTAMMTA 467
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +Q R + + NV N ++ Y + + AK +F + KN SW
Sbjct: 468 YAQVGRIQKAR----LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASW 523
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +VQN E ++ + R G P D +S LSACA I +E+GR +H++A+K
Sbjct: 524 AAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIK 583
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQ-------------------------------DAEIA 269
+ N +V + L+ MY KCG+++ DA +
Sbjct: 584 TGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVV 643
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F KMP+R++V W AII Y GH ++AL F +M + + PN +T+ +LSAC G
Sbjct: 644 FEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK--PNQLTVTSLLSACGNLG 701
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A++ G + F+++ K G ++ + + G D + + +EMP I+ W A+
Sbjct: 702 AIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHDLIT-WNAV 758
Query: 390 LNAC 393
L C
Sbjct: 759 LVGC 762
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 177/379 (46%), Gaps = 28/379 (7%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV S + YS+ G D+A +FD +N+ TW ++ GR + A + F ++
Sbjct: 201 DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT 260
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E +++++ A ++ L+ R+L + + NV+ N +V Y C +
Sbjct: 261 ----ERNVVSWNAMISGYVQNGDLKNARKLFDEMP----EKNVASWNSVVTGYCHCYRMS 312
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ +FD + ++N VSW M+ YV + +F+ R P + VLSA
Sbjct: 313 EARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT 372
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ LEL S+ +A+K EG++ VGSA+++ Y + GS+ A F MPERN W
Sbjct: 373 GLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTT 432
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I +A G D A+ +E + T +++A ++ G ++K IF +
Sbjct: 433 MIAAFAQCGRLDDAIQLYERVPEQ------TVATKTAMMTAYAQVGRIQKARLIFDEI-- 484
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+ P + ++ + G++ A ++ ++MP++ + S W A++ + + E R
Sbjct: 485 ---LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS-WAAMIAG---FVQNEESR 537
Query: 404 IAADNLFKLD-----PNDS 417
A + L +L P+DS
Sbjct: 538 EALELLIELHRSGSVPSDS 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN T L A L G+Q HAL K G +FVG S MY K G +D
Sbjct: 683 IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGF 741
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+EMPE +L TWNA + G K AI F + G PD ++F L ACS
Sbjct: 742 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 801
Query: 126 LLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSM 183
L+ G + + G V +VD G+ + A+ + + + K D V W ++
Sbjct: 802 LVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEAL 861
Query: 184 L 184
L
Sbjct: 862 L 862
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN + G+ V A+ VF+ +I ++ VSW SM+ Y QN + + +F + +
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ L+ A+ +E R V ++ E N+ +A++ Y + G +++A
Sbjct: 234 RTWTIL----LTGYAKEGRIEEAREV----FESMTERNVVSWNAMISGYVQNGDLKNARK 285
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM--------------------- 307
F++MPE+N+ WN+++ GY H A F++M
Sbjct: 286 LFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEA 345
Query: 308 --------RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
R A P+ V VLSA + +E + + +K G + + +++
Sbjct: 346 WDVFVKMCRTVARPDQSIFVVVLSAITGLDDLEL-IGSLRPIAIKTGYEGDVVVGSAILN 404
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS-G 418
R G +D A + MP R S W ++ A G+ + A L++ P +
Sbjct: 405 AYTRNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLD----DAIQLYERVPEQTVA 459
Query: 419 NHVLLSNMFAATGRWEEADLVRKEM 443
+ +A GR ++A L+ E+
Sbjct: 460 TKTAMMTAYAQVGRIQKARLIFDEI 484
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + ++F + + G+ G +++A FN+M +R++V WN++I GY+ G D A
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ N T +L+ ++ G +E+ ++F SMT + + + ++
Sbjct: 224 LFDAFVG------KNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS-----WNAMIS 272
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA-CRVYGKPELGRIAADNLFKLDP--ND 416
+ G + A ++ EMP + ++ W +++ C Y E A LF P N
Sbjct: 273 GYVQNGDLKNARKLFDEMPEK-NVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNS 326
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
V++S + WE D+ K + V
Sbjct: 327 VSWMVMISGYVHISDYWEAWDVFVKMCRTVA 357
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/586 (40%), Positives = 342/586 (58%), Gaps = 8/586 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + + T+ L K SA GK++H G +FV + +MY K L
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+ +FDEMPERN+ +W IS A A+ I + R G P++ T+ + L A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMIS-AYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L RQLH ++++G + +V V + L+D Y K +++ A VFD + ++ V W
Sbjct: 165 CDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ + QN + +F +R G ++SVL AC +A LELGR VH +K
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK 281
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + +AL+DMY KCGS++DA AF++M E++++ W+ ++ G A G++ AL
Sbjct: 282 --FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALEL 339
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + PNY+T++ VL ACS AG VEKG F SM +G+ PG EHY C++DL
Sbjct: 340 FESMKE--SGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDL 397
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A ++I EM P W LL ACRV+ +L AA + +L+P D+G +
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTY 457
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++A T RWE+ VRK M + GI+K GCSWI V +IH+F DTSH + EI
Sbjct: 458 ILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIV 517
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L E + GY+PDTNF L D+E E+K + +HSEK+A+ FGL+ + +RI
Sbjct: 518 QRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIR 577
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH K +S + R +++RD R+H F DG CSC DYW
Sbjct: 578 KNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 183/389 (47%), Gaps = 46/389 (11%)
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
R A+DA + R G D IT+ + CS +Q G+++H + G++ + V N
Sbjct: 38 RAMRAMDA---MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ Y K N + A+ +FD + ++N VSW +M+ Y N + + + REGV P
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRP 153
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
F SSVL AC + L R +H +K +E ++FV SAL+D+Y K + +A F
Sbjct: 154 NMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVF 210
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++MP R+LV WN+IIGG+A + AL+ F+ M R + + TL VL AC+
Sbjct: 211 DEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMK--RAGFLADQATLTSVLRACTGLAL 268
Query: 331 VEKGMKI----------------FYSMTLKYG------------IKPGAEHYACVVDLLG 362
+E G ++ M K G ++ ++ +V L
Sbjct: 269 LELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328
Query: 363 RAGLVDRAYEI---IKEMPMRPT-ISVWGALLNACRVYGKPELGRI---AADNLFKLDPN 415
+ G +A E+ +KE RP I+V G L AC G E G + LF +DP
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLF-ACSHAGLVEKGWYYFRSMKKLFGVDPG 387
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMK 444
++ L ++ GR +EA + EM+
Sbjct: 388 RE-HYGCLIDLLGRAGRLDEAVKLIHEME 415
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 333/576 (57%), Gaps = 2/576 (0%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
FT L + + + GK H LA+ G + D ++Y+K G D A ++FD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M R++ +WN I+ A+ F + R G + T + L AC+ +
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+QLH ++ D + V +D Y KCN + A VF+ + +K V+W S+ +VQN
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E +F + +REG++ +F +SS+LS CA +A + G VHAV VK N+FV
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++LVD+Y KCG I+ + F M E+N+V WNA+I ++ H+ A+ FE+M +
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQV--G 354
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
PN VT + +LSACS G VE+G F + +P HY+C+VD+LGR+G D A
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
++++ +MP PT S+WG+LL + R++ L RIAA+ LF+L+P + GNHVLLSN++AA+
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
G WE + RK ++D G KK G SWI K +IH+F A + H T++ L ++ EM
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
+ + +T L+DV ++K + HHSEK+A AFGLI++PP +PI I KNLRICGDCH
Sbjct: 535 RKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCH 594
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S K +S I R+VIVRD NRFH F DG CSC D+W
Sbjct: 595 SFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D+ T L C+ L +G+ HG + G + CN L++ Y KC + A+ VF
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + ++ +SW +M+ Y N E+ ++F REG + +F +SS L ACA +
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
+ +H +A+K ++ + FVG+A +D+Y KC I+DA F MPE+ V W+++ G+
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G + L F+ ++ R T+ +LS C+ + +G ++ +++ +K+G
Sbjct: 235 QNGLHEEVLCLFQ--STQREGMQLTEFTVSSILSTCASLALIIEGTQV-HAVIVKHGFHR 291
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+VD+ + G ++++YE+ +M + + +W A++
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVV-LWNAMI 331
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 157/326 (48%), Gaps = 2/326 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE +FT A +A + + KQLH +A+K FVG + D+Y+K +
Sbjct: 148 MHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNM 207
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F+ MPE+ TW++ + V G + + F + +R G + T + L+
Sbjct: 208 IKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILST 267
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +L+ G Q+H +V+ GF N+ V LVD Y KC ++ + VF + +KN V W
Sbjct: 268 CASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLW 327
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + ++ +F ++ G+ P + S+LSAC+ +E GR + +
Sbjct: 328 NAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLS 387
Query: 241 -ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
E N+ S +VD+ G+ G +A +KMP E W +++G + +A
Sbjct: 388 DRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLAR 447
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ E++ + E N+V L V +A
Sbjct: 448 IAAEQLFRLEPENGGNHVLLSNVYAA 473
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/653 (37%), Positives = 359/653 (54%), Gaps = 70/653 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--- 57
M RE I P+ FT + + +A TGK++H+ +K G +V V S +MY+K
Sbjct: 137 MMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 58 ----------------------------TGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
G D A F++M ER++ TWN+ IS
Sbjct: 197 PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQR 256
Query: 90 GRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+D F LR + PD T + L+AC++ L +G Q+H +V +GFD + V
Sbjct: 257 GYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV 316
Query: 149 CNGLVDFYGKCN---------------------------------EVGLAKVVFDGIIDK 175
N L+ Y +C ++ AK +FD + D+
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR 376
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V Y Q+ +F + E P + ++++LS + +A L G+ +H
Sbjct: 377 DVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIH 436
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
AVK+ ++ V +AL+ MY K GSI A AF+ + ER+ V W ++I A GHA
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 295 DMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ AL FE +M E + P+++T V V SAC+ AG V +G + F M I P H
Sbjct: 497 EEALELFE---TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC+VDL GRAGL+ A E I++MP+ P + WG+LL+ACRVY +LG++AA+ L L+
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLE 613
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P +SG + L+N+++A G+WEEA +RK MKD +KK G SWI VK+++H F +D H
Sbjct: 614 PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIH 673
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ EI + K+ +E+K GY+PDT L+D+EEE K + HHSEK+A+AFGLI+ P
Sbjct: 674 PQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPD 733
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCH+A KFIS +VGRE+IVRD RFH F DG+CSC DYW
Sbjct: 734 KTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 203/472 (43%), Gaps = 105/472 (22%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS--- 84
T + +H +KSG + V++ + ++YSKTG A K+FDEMP R +WN +S
Sbjct: 32 TAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYA 91
Query: 85 ------------------------NAVLG----GRPKNAIDAFINLRRTGGEPDLITFCA 116
++G G+ AI + R G EP T
Sbjct: 92 KRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTN 151
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L + + L+ G+++H F+V+ G GNVSV N L++ Y KC + +AKVVFD ++ K+
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211
Query: 177 DVSWCSMLVVYVQ---------NYEEE----------------------NGCQMFLTARR 205
SW +M+ +++Q +E+ MF R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 206 EG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ + P F ++SVLSACA + L +G +H+ V + + V +AL+ MY +CG ++
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 265 ---------------------------------DAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+A+ F+ + +R++V W A+I GY
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQH 391
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A++ F M E PN TL +LS S ++ G +I S +K G
Sbjct: 392 GLYGEAINLFRSMVGE--EQRPNSYTLAAMLSVASSLASLGHGKQIHGS-AVKSGEIYSV 448
Query: 352 EHYACVVDLLGRAGLV---DRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + +AG + RA+++I+ R T+S W +++ A +G E
Sbjct: 449 SVSNALITMYAKAGSITSASRAFDLIR--CERDTVS-WTSMIIALAQHGHAE 497
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 210 PKDFMISSVLSACARIAGLELGRS--------VHAVAVKACVEGNIFVGSALVDMYGKCG 261
P +S++L C + + +S VH +K+ + ++++ + L+++Y K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
A F++MP R WN ++ YA +G D + F+ + + V+ +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQ------RDSVSWTTM 117
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD---RAYEIIKEMP 378
+ G K ++I M ++ GI+P V+ + ++ + + I ++
Sbjct: 118 IVGYKNIGQYHKAIRIMGEM-MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLG 176
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+R +SV +LLN G P + ++ D + D
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 354/590 (60%), Gaps = 17/590 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ + L K + L GK +H + S +D+ + S MY+K G + A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDA---FINLRRTGGEPD------LITFCA 116
++FDEM +++ TW + I+ G +A A F+ + R G P+ L+ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
FL +C D G+Q+HG + GF NV V + LVD Y +C E+ +++VFD + KN
Sbjct: 207 FLGSCVD------GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKN 260
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+VSW +++ + + E E +F+ +REG +F S++L + + LE G+ +HA
Sbjct: 261 EVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHA 320
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K+ + +VG+ L+ MY K G+I DA+ F+++ + ++V N+++ GYA G
Sbjct: 321 HMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKE 380
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ FEEM + E PN +T + VL+ACS AG +++G+ ++ + KYG++P HY
Sbjct: 381 AVELFEEMM-LWVEIEPNDITFLSVLTACSHAGLLDEGL-YYFELMKKYGLEPKLSHYTT 438
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVDL GRAGL+D+A I+EMP+ P ++WGALL A +++ E+G AA + +LDP
Sbjct: 439 VVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFY 498
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G H LLSN++A+ G+W++ VRKEMKD G+KK CSW+ ++N +HIF A D SH +
Sbjct: 499 PGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQK 558
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
++ M L +++K GY+PDT+ V+++EK + +HSEK+ALAF L+ PG
Sbjct: 559 NKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSV 618
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KN+R+CGDCHSA K++S +V RE+IVRD NRFH F DG CSC DYW
Sbjct: 619 IRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 2/298 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + PN+F L K L V GKQ+H K G +VFVG S DMY++ G
Sbjct: 186 MVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGE 245
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ +FDE+ +N +WNA IS G + A+ F+ ++R G T+ A L +
Sbjct: 246 LRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S L+ G+ LH +++SG V N L+ Y K + AK VFD ++ + VS
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSC 365
Query: 181 CSMLVVYVQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
SML+ Y Q+ + ++F +EP D SVL+AC+ L+ G +
Sbjct: 366 NSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK 425
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
K +E + + +VD++G+ G + A+ +MP E N W A++G + +M
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEM 483
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 337/586 (57%), Gaps = 39/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N FTFP + A S++ G+Q+H +++G + +V + DMY+K G
Sbjct: 306 MHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGD 365
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++ + M + ++ +WN+ I V G + AI F + + D TF + LN
Sbjct: 366 LGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNC 425
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + G+ +H ++++GF+ V N LVD Y K ++ A VF+ + +K+ +SW
Sbjct: 426 CIVGRID--GKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISW 483
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Y QN E + F R GV P F+++S+LSACA + LE G+ VH+ +K
Sbjct: 484 TSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIK 543
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ V ++LV MY KCG + DA+ F M R+++ W A+I GYA
Sbjct: 544 LGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYA----------- 592
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
R G +K F M YGI+PG EHYAC++DL
Sbjct: 593 --------------------------RNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDL 626
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GR G +D A EI+ +M ++P +VW ALL ACRV+G ELG AA NLF+L+P ++ +
Sbjct: 627 FGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPY 686
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V+LSNM+ A +W++A +R+ MK GI K GCSWI + +R+H F ++D H R EI
Sbjct: 687 VMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIY 746
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ + ++ +K GY+PD NF+L+D++ E K + +HSEK+A+AFGL+A PPG PIRI
Sbjct: 747 SKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIF 806
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA K+ISG+ R +I+RD+N FH F +G CSC DYW
Sbjct: 807 KNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 219/452 (48%), Gaps = 20/452 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E P+ +T + + SAL + G+ +H +K+G +V+V DMY+K
Sbjct: 203 MRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRH 262
Query: 61 KDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+A+ +F + + N W A ++ G AI+ F + G E + TF + L
Sbjct: 263 ISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSIL 322
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
ACS S G Q+HG +VR+GF N V + LVD Y KC ++G AK V + + D + V
Sbjct: 323 TACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVV 382
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+V V++ EE +F ++ + SVL+ C I G G+SVH +
Sbjct: 383 SWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLV 440
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K E V +ALVDMY K + A F KM E++++ W +++ GY G + +L
Sbjct: 441 IKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESL 500
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+F MR V P+ + +LSAC+ +E G ++ +S +K G++ +
Sbjct: 501 KTF---CDMRISGVSPDQFIVASILSACAELTLLEFGKQV-HSDFIKLGLRSSLSVNNSL 556
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA------ADNLFK 411
V + + G +D A I M +R I+ W AL+ Y + GR + ++
Sbjct: 557 VTMYAKCGCLDDADAIFVSMHVRDVIT-WTALIVG---YARNGKGRDSLKYFQQMKKIYG 612
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
++P ++ + ++F G+ +EA + +M
Sbjct: 613 IEPGPE-HYACMIDLFGRLGKLDEAKEILNQM 643
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 196/439 (44%), Gaps = 59/439 (13%)
Query: 11 FTFPCLFKASSALHIPV------------TGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
F P + S+AL + + TG Q + + +F + SK+
Sbjct: 69 FLIPLGYYISTALSVLLSASPSLNEDSDDTGVQQVVMHNIADSYQSIFHSNQLLNGLSKS 128
Query: 59 GLKDDADKMFDEMPERNLATWNAYISN-AVLG---------------------------- 89
G DDA ++FD+M +R+ TWN +S A +G
Sbjct: 129 GQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYC 188
Query: 90 --GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
GR A D F +R G +P T + L CS L+Q G +HG++V++GF+ NV
Sbjct: 189 RFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVY 248
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V GLVD Y KC + A+++F G+ N V W +M+ Y QN ++ + F
Sbjct: 249 VVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHT 308
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
EGVE F S+L+AC+ ++ G VH V+ N +V SALVDMY KCG +
Sbjct: 309 EGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGS 368
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A+ M + ++V WN++I G G + A+ F++M + R + +Y T VL+ C
Sbjct: 369 AKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHA-RNMKIDHY-TFPSVLNCC 426
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRP 381
K + IK G E+Y V VD+ + ++ AY + ++M +
Sbjct: 427 IVGRIDGKSVHCLV-------IKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKD 479
Query: 382 TISVWGALLNACRVYGKPE 400
IS W +L+ G E
Sbjct: 480 VIS-WTSLVTGYTQNGSHE 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 113/309 (36%), Gaps = 76/309 (24%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+++ ++GI+ + S+ + + +N ++ L + P + IS+ LS
Sbjct: 27 SEIRYEGILYNINTEESSIALRNSCDSHLDNDLRLILFTLSLFLIPLGYYISTALSVLLS 86
Query: 225 IAGLELGRSVHAVAVKACVEGNI-------FVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
A L V+ V NI F + L++ K G I DA F+KM +R+
Sbjct: 87 -ASPSLNEDSDDTGVQQVVMHNIADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRD 145
Query: 278 LVCWNAIIGGYAHQGHADMA----------------------------LSSFEEMTSMRC 309
WN ++ GYA+ G A +F+ MR
Sbjct: 146 EYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRL 205
Query: 310 EAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E P+ TL +L CS G ++KG M Y +K G E VV AGLVD
Sbjct: 206 EGQKPSQYTLGSILRGCSALGLIQKG-----EMIHGYVVKNGFESNVYVV-----AGLVD 255
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
+ CR + E+ LFK + GNHVL + M
Sbjct: 256 --------------------MYAKCRHISEAEI-------LFKGLAFNKGNHVLWTAM-- 286
Query: 429 ATGRWEEAD 437
TG + D
Sbjct: 287 VTGYAQNGD 295
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 345/602 (57%), Gaps = 22/602 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA+ LK + + FV + DMY+ A
Sbjct: 278 VRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASA 337
Query: 65 DKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
++FD +PE R L WNA I G + A++ F + G P T L AC
Sbjct: 338 RRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC 397
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++V+ G GN V N L+D Y + E+ +A+ +F I ++ VSW
Sbjct: 398 ARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWN 457
Query: 182 SMLVVYVQNYEEENGCQMFLTAR------------REGVE----PKDFMISSVLSACARI 225
+++ V Q+ + EG P + + ++L CA +
Sbjct: 458 TLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAAL 517
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
A G+ +H AV+ +E +I VGSALVDMY KCG + + F+++P RN++ WN +I
Sbjct: 518 AAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLI 577
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
Y G D A++ F+EM + EA PN VT + L+ACS +G V++G+++F+ M +
Sbjct: 578 MAYGMHGLGDEAVALFDEMAA-GGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDH 636
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPELGRI 404
G+KP + +ACVVD+LGRAG +D AY II M P +S W +LL ACR++ ELG +
Sbjct: 637 GVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEV 696
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA+ LF+L+P ++ ++VLL N+++A G W+++ VR M+ G+ K GCSWI + IH
Sbjct: 697 AAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIH 756
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F A ++SH + E+ A + L E M+ GY PDT+ L+DV+E+EK + +HSEK+A+
Sbjct: 757 RFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAI 816
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
AFGL+ PPG IR+ KNLR+C DCH A KF+S +VGR++++RD RFH F DG CSC D
Sbjct: 817 AFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGD 876
Query: 585 YW 586
YW
Sbjct: 877 YW 878
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 199/421 (47%), Gaps = 36/421 (8%)
Query: 9 NDFTFPCLFKASSALHIP-----VTGKQLHALALKSGQI---HDVFVGCSAFDMYSKTGL 60
+ FT + A S H+P G++ HA ALK G + + F + MY++ GL
Sbjct: 168 SSFTLVSVLLACS--HLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGL 225
Query: 61 KDDADKMFDEMPER------NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
DDA +F ++ TWN IS V GGR A++ ++ G PD +TF
Sbjct: 226 VDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTF 285
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L ACS +L LGR++H +++ N V + LVD Y +V A+ VFD +
Sbjct: 286 ASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVP 345
Query: 174 DKNDV--SWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLEL 230
+ + W +M+ Y Q +E ++F E G P + +S VL ACAR G
Sbjct: 346 EPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAG 405
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
++H VK + GN FV +AL+DMY + G + A F + R++V WN +I G
Sbjct: 406 KEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVV 465
Query: 291 QGHADMALSSFEEM-----------TSMRCEA---VPNYVTLVCVLSACSRAGAVEKGMK 336
QGHA A EM T+ EA +PN +TL+ +L C+ A +G +
Sbjct: 466 QGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKE 525
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + +++ ++ + +VD+ + G + + + +P R I+ W L+ A ++
Sbjct: 526 I-HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVIT-WNVLIMAYGMH 583
Query: 397 G 397
G
Sbjct: 584 G 584
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 184/409 (44%), Gaps = 23/409 (5%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADK 66
+ F P K+++AL + LHA AL+ +H VG + Y++ G D A
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 67 MFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSD 123
+F R+ ++N+ IS L + + A+DA ++ G + T + L ACS
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181
Query: 124 C---SLLQLGRQLHGFLVRSGF--DGNVSVC-NGLVDFYGKCNEVGLAKVVFDGIIDK-- 175
+LGR+ H F ++ GF +G N L+ Y + V A+ +F
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241
Query: 176 ----NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ V+W +M+ + VQ ++ GV P +S L AC+R+ L LG
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301
Query: 232 RSVHAVAVK-ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGY 288
R +HAV +K A + N FV SALVDMY + A F+ +PE R L WNA+I GY
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A G + AL F M + P+ T+ VL AC+R+ G + + +K G+
Sbjct: 362 AQAGMDEEALELFSRMEA-EAGCAPSETTMSGVLPACARSEGF-AGKEAMHGYVVKRGMA 419
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ R G +D A I + R +S W L+ C V G
Sbjct: 420 GNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS-WNTLITGCVVQG 467
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 336/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR P+ FP + K+ + + G+ +H ++ G D++ G + +MYSK
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG 155
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D K+F+ MP +++ ++N I+ G ++A+ + + +PD T + L
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S+ + G+++HG+++R G D +V + + LVD Y K + ++ VF + ++ +SW
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISW 275
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YVQN ++F V P SSV+ ACA +A L LG+ +H ++
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
NIF+ SALVDMY KCG+IQ A F++M + V W AII G+A GH A+S
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM R PN V V VL+ACS G V++ F SMT YG+ EHYA V DL
Sbjct: 396 FEEMK--RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 453
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ AY+ I +M + PT SVW LL++C V+ EL A+ +F +D + G +
Sbjct: 454 LGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAY 513
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+ NM+A+ GRW+E +R ++ G++K CSWI +KN+ H F + D SH I
Sbjct: 514 VLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRIN 573
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L + E+M+ GY+ DT+ L+DV+EE K + HSE++A+AFG+I PG IR+T
Sbjct: 574 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 633
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+RIC DCH A KFIS I RE+IVRDN+RFH F G CSC DYW
Sbjct: 634 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 182/392 (46%), Gaps = 5/392 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+S + L K + + KQLHA +++ + +Y+ L +A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEAL 59
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F + + W + I A+ +F+ +R +G PD F + L +C+
Sbjct: 60 LVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G +HGF+VR G D ++ N L++ Y K + + VF+ + K+ VS+ +++
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIA 179
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q+ E+ +M ++P F +SSVL + + G+ +H ++ ++
Sbjct: 180 GYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDS 239
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++++GS+LVDMY K I+D+E F+ + R+ + WN+++ GY G + AL F +M
Sbjct: 240 DVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMV 299
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
S + P V V+ AC+ + G K + L+ G + +VD+ + G
Sbjct: 300 SAKVR--PGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGRNIFIASALVDMYSKCG 356
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ A +I M + +S W A++ ++G
Sbjct: 357 NIQAARKIFDRMNLHDEVS-WTAIIMGHALHG 387
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 336/589 (57%), Gaps = 5/589 (0%)
Query: 1 MRRECISPN--DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+R C+ PN TFP K++S L P+ G+QLHA +LK + V S +Y++
Sbjct: 106 LRLHCLLPNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYAR 165
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL A ++FDEMP + +W A I+ + G + A+ N G PD T
Sbjct: 166 CGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 225
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ + L G + + G +V V VD Y KC E+ A+ VFD + DK+
Sbjct: 226 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 285
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y N +FL + EGV P + ++ LSAC R+ L+LGR +
Sbjct: 286 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 345
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N +G+AL+DMY KCGS +A + F +M +++++ WNA+I G GH A
Sbjct: 346 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 405
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +M + N T + +L +C+ G ++ G + F++MT Y I P EHY C+
Sbjct: 406 FTLIGQMEKSGVKLNDN--TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI 463
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A+++I +MPM + GALL C+++ EL L +L+P +S
Sbjct: 464 VDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNS 523
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+V+LSN+++ GRWE+A +R +MK+ G++K CSW+ + ++H F+ D SH +
Sbjct: 524 GNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 583
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L EMK GY P T ++DVE+EEK + HHSEK+A+AF L+ PG I
Sbjct: 584 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETI 643
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+TKNLR+C DCH+A K IS I RE+IVRDNNRFH F DG CSC+DYW
Sbjct: 644 RVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 336/589 (57%), Gaps = 5/589 (0%)
Query: 1 MRRECISPN--DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+R C+ PN TFP K++S L P+ G+QLHA +LK + V S +Y++
Sbjct: 59 LRLHCLLPNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYAR 118
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL A ++FDEMP + +W A I+ + G + A+ N G PD T
Sbjct: 119 CGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 178
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ + L G + + G +V V VD Y KC E+ A+ VFD + DK+
Sbjct: 179 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 238
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y N +FL + EGV P + ++ LSAC R+ L+LGR +
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 298
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N +G+AL+DMY KCGS +A + F +M +++++ WNA+I G GH A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 358
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +M + N T + +L +C+ G ++ G + F++MT Y I P EHY C+
Sbjct: 359 FTLIGQMEKSGVKLNDN--TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI 416
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A+++I +MPM + GALL C+++ EL L +L+P +S
Sbjct: 417 VDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNS 476
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+V+LSN+++ GRWE+A +R +MK+ G++K CSW+ + ++H F+ D SH +
Sbjct: 477 GNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 536
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L EMK GY P T ++DVE+EEK + HHSEK+A+AF L+ PG I
Sbjct: 537 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETI 596
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+TKNLR+C DCH+A K IS I RE+IVRDNNRFH F DG CSC+DYW
Sbjct: 597 RVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/582 (40%), Positives = 332/582 (57%), Gaps = 5/582 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FT L + + GK+LH+ ++SG + D+ VGCS DMY+K GL +A K+
Sbjct: 260 PDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKV 319
Query: 68 FDEMPERNLATWNAYISNAVLGG--RPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
FD M E N+ +W A ++ V GG + A+ F N+ GG P+ TF L AC+
Sbjct: 320 FDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASL 379
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
G Q+HG ++ G V NGLV Y K + A+ FD + +KN VS +
Sbjct: 380 PDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVD 439
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
V+++ + + G F +S+LS A I + G +HA+ VK
Sbjct: 440 DTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR 499
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ V +AL+ MY KCG+ + A FN M + N++ W +II G+A G A AL F M
Sbjct: 500 TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNM 559
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ PN VT + VLSACS G +++ K F SM +GI P EHYAC+VDLLGR+
Sbjct: 560 --LETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRS 617
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
GL+ A E I MP VW L +CRV+ +LG AA + + +P+D ++LLS
Sbjct: 618 GLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLS 677
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A GRWE+ +RK MK I K AG SWI V+N++H F DT H + +I L
Sbjct: 678 NLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLD 737
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L ++K GY+P+T+F L+DVE+E+K + HSEK+A+AF LI+ P PIR+ KNLR
Sbjct: 738 ELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLR 797
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH+A K+IS + GRE++VRD NRFH DG CSC+DYW
Sbjct: 798 VCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 12/329 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM--PERNLATWNAYISNA 86
GK LH S D + S +YSK+ A +F M +R++ ++++ IS
Sbjct: 71 GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130
Query: 87 VLGGRPKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDG 144
A++ F L + G P+ F A + AC + G L GF++++G FD
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDS 190
Query: 145 NVSVCNGLVDFYGK-CNEVGL--AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+V V L+D + K C+ L A+ VFD + +KN V+W M+ Q + +FL
Sbjct: 191 HVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFL 250
Query: 202 TAR-REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
G P F ++ ++S CA I L LG+ +H+ +++ + ++ VG +LVDMY KC
Sbjct: 251 EMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKC 310
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAH--QGHADMALSSFEEMTSMRCEAVPNYVTL 318
G +Q+A F+ M E N++ W A++ GY G+ A+ F M ++ PN T
Sbjct: 311 GLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML-LQGGVAPNCFTF 369
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
VL AC+ + G ++ + T+K G+
Sbjct: 370 SGVLKACASLPDFDFGEQV-HGQTIKLGL 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 2/283 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PN FTF + KA ++L G+Q+H +K G VG +Y+K+G + A
Sbjct: 362 VAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESAR 421
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K FD + E+NL + V + D + G T+ + L+ +
Sbjct: 422 KCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIG 481
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+H +V+ GF ++SV N L+ Y KC A VF+ + D N ++W S++
Sbjct: 482 TIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIIN 541
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGRSVHAVAVKACVE 244
+ ++ ++F GV+P D +VLSAC+ + + E + ++ +
Sbjct: 542 GFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIV 601
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIG 286
+ + +VD+ G+ G + +A N MP + + + W +G
Sbjct: 602 PRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLG 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 14/311 (4%)
Query: 92 PKNAIDAFINLRRTGGEP----DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+ A L T E LIT L C LG+ LH L S +
Sbjct: 29 PQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTL 88
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMF-LTAR 204
+ N L+ Y K N+ A +F + + ++ VS+ S++ + N +MF
Sbjct: 89 LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKCGSI 263
++GV P ++ ++V+ AC + + G + +K + ++ VG L+DM+ K S+
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSL 208
Query: 264 QDAEIA---FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
D E A F+KM E+N+V W +I A G+ D A+ F EM + VP+ TL
Sbjct: 209 ADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEML-VSSGYVPDRFTLTG 267
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
++S C+ + G K +S ++ G+ +VD+ + GLV A ++ M
Sbjct: 268 LISVCAEIQFLSLG-KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREH 326
Query: 381 PTISVWGALLN 391
+S W AL+N
Sbjct: 327 NVMS-WTALVN 336
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 332/556 (59%), Gaps = 3/556 (0%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +KS D F+G MY K G +DA ++FDEMP ++L +WN+ +S G
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 92 PKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
++AF +R +G +P+ +T + ++AC+D L G+ LHG +V+ G G V N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ YGK + A +F+ + ++ VSW SM+V++ N E G +F +R G+ P
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++L AC S+HA + +I + +AL+++Y K G + +E F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++ +R+ + W A++ GYA A+ F+ M E ++VT +LSACS +G
Sbjct: 324 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV--DHVTFTHLLSACSHSGL 381
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G K F M+ Y ++P +HY+C+VDLLGR+G ++ AYE+IK MPM P+ VWGALL
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACRVYG ELG+ A+ L LDP+D N+++LSN+++A G W +A VR MK+ + +
Sbjct: 442 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 501
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS+I N+IH F D H R+ EI L +L +++ AG P T F L+D++EE
Sbjct: 502 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 561
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K+ + HSEK+A+AFGL+ GVP+ ITKNLRICGDCHS KF S + R +I+RD+
Sbjct: 562 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 621
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 622 RFHHFADGLCSCRDYW 637
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
PN+ T + A + + GK LH + +K G V S +MY K G D A +
Sbjct: 161 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 220
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F+EMP R+L +WN+ + G + +D F ++R G PD T A L AC+D L
Sbjct: 221 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 280
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+ +H ++ R GF+ ++ + L++ Y K + ++ +F+ I D++ ++W +ML
Sbjct: 281 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 340
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEG 245
Y + ++F +EGVE + +LSAC+ +E G+ + + VE
Sbjct: 341 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 400
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ S +VD+ G+ G ++DA MP E + W A++G G+ ++ E++
Sbjct: 401 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 460
Query: 305 TSMRCEAVPNYVTLVCVLSA 324
S+ NY+ L + SA
Sbjct: 461 LSLDPSDHRNYIMLSNIYSA 480
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 14/333 (4%)
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A S C+ + +H +++S + + + LV Y K A+ +FD + +K+ VS
Sbjct: 71 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 130
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W S++ F R E G +P + + SV+SACA + L+ G+S+H V
Sbjct: 131 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 190
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK + G V ++L++MYGK G + A F +MP R+LV WN+++ + H G+A+ +
Sbjct: 191 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGM 250
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M R P+ T+V +L AC+ G + I ++ + G ++
Sbjct: 251 DLFNLMK--RAGINPDQATMVALLRACTDTGLGRQAESI-HAYIHRCGFNADIIIATALL 307
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-- 416
+L + G ++ + +I +E+ R I+ W A+L Y GR A LF L +
Sbjct: 308 NLYAKLGRLNASEDIFEEIKDRDRIA-WTAMLAG---YAVHACGR-EAIKLFDLMVKEGV 362
Query: 417 SGNHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
+HV +++ +A +G EE + M +V
Sbjct: 363 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 395
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 107/179 (59%), Gaps = 7/179 (3%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
++ S++ A + + ++HA +K+ + F+G LV MY K G +DA+ F++M
Sbjct: 64 IVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA--VPNYVTLVCVLSACSRAGAV 331
P ++LV WN+++ G + +G+ L++F MR E+ PN VTL+ V+SAC+ GA+
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAF---CRMRTESGRQPNEVTLLSVVSACADMGAL 180
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++G K + + +K G+ A+ ++++ G+ G +D A ++ +EMP+R +S W +++
Sbjct: 181 DEG-KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 237
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I+P+ T L +A + + + +HA + G D+ + + ++Y+K G
Sbjct: 256 MKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGR 315
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++ +F+E+ +R+ W A ++ + + AI F + + G E D +TF L+A
Sbjct: 316 LNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 375
Query: 121 CSDCSLLQLGRQ 132
CS L++ G++
Sbjct: 376 CSHSGLVEEGKK 387
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 332/556 (59%), Gaps = 3/556 (0%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +KS D F+G MY K G +DA ++FDEMP ++L +WN+ +S G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 92 PKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
++AF +R +G +P+ +T + ++AC+D L G+ LHG +V+ G G V N
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ YGK + A +F+ + ++ VSW SM+V++ N E G +F +R G+ P
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++L AC S+HA + +I + +AL+++Y K G + +E F
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++ +R+ + W A++ GYA A+ F+ M E ++VT +LSACS +G
Sbjct: 381 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV--DHVTFTHLLSACSHSGL 438
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G K F M+ Y ++P +HY+C+VDLLGR+G ++ AYE+IK MPM P+ VWGALL
Sbjct: 439 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACRVYG ELG+ A+ L LDP+D N+++LSN+++A G W +A VR MK+ + +
Sbjct: 499 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 558
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS+I N+IH F D H R+ EI L +L +++ AG P T F L+D++EE
Sbjct: 559 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 618
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K+ + HSEK+A+AFGL+ GVP+ ITKNLRICGDCHS KF S + R +I+RD+
Sbjct: 619 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 678
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 679 RFHHFADGLCSCRDYW 694
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+ T + A + + GK LH + +K G V S +MY K G D A ++
Sbjct: 219 PNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 278
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP R+L +WN+ + G + +D F ++R G PD T A L AC+D L
Sbjct: 279 FEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG 338
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ +H ++ R GF+ ++ + L++ Y K + ++ +F+ I D++ ++W +ML Y
Sbjct: 339 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGY 398
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGN 246
+ ++F +EGVE + +LSAC+ +E G+ + + VE
Sbjct: 399 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 458
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ S +VD+ G+ G ++DA MP E + W A++G G+ ++ E++
Sbjct: 459 LDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL 518
Query: 306 SMRCEAVPNYVTLVCVLSA 324
S+ NY+ L + SA
Sbjct: 519 SLDPSDHRNYIMLSNIYSA 537
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 11/313 (3%)
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A S C+ + +H +++S + + + LV Y K A+ +FD + +K+ VS
Sbjct: 128 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 187
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W S++ F R E G +P + + SV+SACA + L+ G+S+H V
Sbjct: 188 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 247
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK + G V ++L++MYGK G + A F +MP R+LV WN+++ + H G+A+ +
Sbjct: 248 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGM 307
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M R P+ T+V +L AC+ G + I ++ + G ++
Sbjct: 308 DLFNLMK--RAGINPDQATMVALLRACTDTGLGRQAESI-HAYIHRCGFNADIIIATALL 364
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-- 416
+L + G ++ + +I +E+ R I+ W A+L V+ GR A LF L +
Sbjct: 365 NLYAKLGRLNASEDIFEEIKDRDRIA-WTAMLAGYAVHA---CGR-EAIKLFDLMVKEGV 419
Query: 417 SGNHVLLSNMFAA 429
+HV +++ +A
Sbjct: 420 EVDHVTFTHLLSA 432
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 116/204 (56%), Gaps = 9/204 (4%)
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ + GC +F A + V ++ S++ A + + ++HA +K+ + F
Sbjct: 98 KRFNTNKGCCIFREASQFIVVYS--IVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGF 155
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+G LV MY K G +DA+ F++MP ++LV WN+++ G + +G+ L++F MR
Sbjct: 156 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAF---CRMR 212
Query: 309 CEA--VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E+ PN VTL+ V+SAC+ GA+++G K + + +K G+ A+ ++++ G+ G
Sbjct: 213 TESGRQPNEVTLLSVVSACADMGALDEG-KSLHGVVVKLGMSGKAKVVNSLINMYGKLGF 271
Query: 367 VDRAYEIIKEMPMRPTISVWGALL 390
+D A ++ +EMP+R +S W +++
Sbjct: 272 LDAASQLFEEMPVRSLVS-WNSMV 294
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I+P+ T L +A + + + +HA + G D+ + + ++Y+K G
Sbjct: 313 MKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGR 372
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++ +F+E+ +R+ W A ++ + + AI F + + G E D +TF L+A
Sbjct: 373 LNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 432
Query: 121 CSDCSLLQLGRQ 132
CS L++ G++
Sbjct: 433 CSHSGLVEEGKK 444
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 334/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ FTF + KA + L++ G +H+L K+G DVFV + YSK G
Sbjct: 95 MHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGF 154
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD+M +N+ +W I + G+ + A+D F L +G PD L A
Sbjct: 155 LRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRA 214
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ GR + + G NV V LVD Y KC + A+ VFDG+++K+ V W
Sbjct: 215 CARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCW 274
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N ++F R+ V P + + LS+CA + LELG +
Sbjct: 275 SAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNY 334
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N +G++L+D Y KCGS+++A + M E++ V +NA+I G A G A
Sbjct: 335 EEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGV 394
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M PN T V +L C+ AG V+ G F SM+ + + P EHY C+VDL
Sbjct: 395 FGQMGKFGIP--PNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDL 452
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAG +D A+ +IK MPM+ + VWG+LL CR++ + +L L +L+P +SG++
Sbjct: 453 LARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHY 512
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN+++A+ RW+EA+ +R + + G++K G SW+ V +H F DTSH + +I
Sbjct: 513 VLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIY 572
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L +++K AGY P T F L+DVEEEEK +G HSEK+A+AF LI+ IR+
Sbjct: 573 EKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVV 632
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K IS + GRE+++RDNNRFH F DG CSC DYW
Sbjct: 633 KNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 7/353 (1%)
Query: 67 MFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F + P N +N I V R NA+ + ++ + PD TF L AC+ +
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG +H + ++GFD +V V +V FY KC + A VFD ++ KN VSW M+
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
++ + +F G+ P F+I VL ACAR+ LE GR + + +
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+FV ++LVDMY KCGS+++A F+ M E+++VCW+A+I GYA G A+ F EM
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ +V LS+C+ GA+E G M + + + ++D + G
Sbjct: 299 KVNVR--PDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTS-LIDFYAKCG 355
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGK--PELGRIAADNLFKLDPND 416
++ A + K M + + V+ A+++ +YG+ G F + PN+
Sbjct: 356 SMEEALGVYKMMKEKDRV-VFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNE 407
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/588 (37%), Positives = 345/588 (58%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ FTFP L KA L G+ +HA + G DVFV +Y+K
Sbjct: 110 MQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRR 169
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +F+ +PER + +W A +S G P A++ F +R+ +PD + + L
Sbjct: 170 LGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVL 229
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
NA + L+ GR +H +++ G + + L Y KC +V AK++FD + N +
Sbjct: 230 NAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +M+ Y +N ++ +F + V P I+S +SACA++ LE R +
Sbjct: 290 LWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYV 349
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++F+ SAL+DM+ KCGS++ A F++ +R++V W+A+I GY G A A+
Sbjct: 350 SRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAI 409
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S + M R PN VT + +L AC+ +G V +G F M + I P +HYAC++
Sbjct: 410 SLYRAME--RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACII 466
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D+AYE+IK MP++P ++VWGALL+AC+ + ELG+ AA LF +DP+++G
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTG 526
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
++V LSN++AA W+ VR MK+ G+ K GCSW+ V+ R+ F+ D SH R E
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEE 586
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I+ + + +K G++ + + +L+D+ +EE + HSE+I +A+GLI+ P G +R
Sbjct: 587 IERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLR 646
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
ITKNLR C +CH+A K IS +VGRE++VRD NRFH F DG CSC DYW
Sbjct: 647 ITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 186/371 (50%), Gaps = 6/371 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA L G F+ S G A ++FD++P + WNA I
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
++A+ + ++ PD TF L AC S LQ+GR +H + R GF+ +V V
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 150 NGLVDFYGKCNEVGLAKVVFDG--IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
NGL+ Y KC +G A+ VF+G + ++ VSW +++ Y QN E ++F R+
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+P + SVL+A + LE GRS+HA +K +E + +L MY KCG + A+
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I F+KM NL+ WNA+I GYA G A A+ F EM + + P+ +++ +SAC++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINK--DVRPDTISITSAISACAQ 335
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G++E+ + + + + ++D+ + G V+ A + R + VW
Sbjct: 336 VGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVV-VWS 393
Query: 388 ALLNACRVYGK 398
A++ ++G+
Sbjct: 394 AMIVGYGLHGQ 404
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/587 (40%), Positives = 347/587 (59%), Gaps = 6/587 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR N TF A S GK LHAL + G +V VG + +Y+K+GL
Sbjct: 327 MRR---GANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGL 383
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K+F MP+R+ TWNA I P A+ AF +R G + IT L A
Sbjct: 384 MIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGA 443
Query: 121 C-SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C + LL+ G +H F++ +GF + V N L+ Y KC ++ + +FD + KN +
Sbjct: 444 CLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASA 503
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ + E + L RR GV +F S L+A A++A LE G+ +H +AV
Sbjct: 504 WNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAV 563
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + N FV SA +DMYGKCG I D + R+ + WN + ++ G + A
Sbjct: 564 KLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKE 623
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+F EM ++ + P++VT V +LSACS G VE+G+ + SM ++GI H C++D
Sbjct: 624 TFHEMINLGVK--PDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIID 681
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+G A IKEMP+ PT VW +LL AC+ +G ELGR A +NL KLDP+D
Sbjct: 682 LLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSA 741
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VL SN+ A TG+WE+ + +R++M IKK CSW+ +KN++ +F D SH + +EI
Sbjct: 742 YVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEI 801
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L +L++ +K AGYIPD ++AL D +EE+K + +HSE++ALA+GLI+ P G ++I
Sbjct: 802 YAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKI 861
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHS +KF SGI+GR++++RD RFH+F G CSC+DYW
Sbjct: 862 FKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 11/432 (2%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR + P+ L A + + + G Q+H +K G + DVFVG S +Y G
Sbjct: 20 MRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYG 79
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
L DA K+F EM +N+ +W A + V G P ++ + +R G + T + ++
Sbjct: 80 LAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVIS 139
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C LG Q+ G +++ G + NVSV N L+ +G V A VF G+ + + +S
Sbjct: 140 TCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTIS 199
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ Y++N + + F R E +S++L+ C + L+ GR +H++ +
Sbjct: 200 WNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVL 259
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K N+ + L+ MY G +DAE+ F M E++++ WN+++ YA G+ AL
Sbjct: 260 KFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALK 319
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
M MR A NYVT L+ACS +G KI +++ + G+ +V
Sbjct: 320 LLATMFYMRRGA--NYVTFTSALAACSDPEFATEG-KILHALVIHVGLHENVIVGNALVT 376
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG- 418
L ++GL+ A ++ + MP R ++ W AL+ +P+ A FKL +
Sbjct: 377 LYAKSGLMIEAKKVFQTMPKRDGVT-WNALIGGHADSEEPD----EALKAFKLMREEGVP 431
Query: 419 -NHVLLSNMFAA 429
N++ +SN+ A
Sbjct: 432 INYITISNVLGA 443
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 170/341 (49%), Gaps = 9/341 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E +S ND T + +L + G Q+ +K G +V V S M+ G
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F M E + +WN+ I+ + G K ++ F + R E + T L
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+ GR +H +++ G++ NV N L+ Y A++VF G+++K+ +SW
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301
Query: 181 CSMLVVYVQNYEEENGCQMFLTA--RREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SM+ Y Q+ + ++ T R G F +S L+AC+ G+ +HA+
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTF--TSALAACSDPEFATEGKILHALV 359
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ + N+ VG+ALV +Y K G + +A+ F MP+R+ V WNA+IGG+A D AL
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419
Query: 299 SSFEEMTSMRCEAVP-NYVTLVCVLSAC-SRAGAVEKGMKI 337
+F+ MR E VP NY+T+ VL AC + +E GM I
Sbjct: 420 KAFK---LMREEGVPINYITISNVLGACLAPNDLLEHGMPI 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 204/452 (45%), Gaps = 40/452 (8%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ +H+L LK G +V + MYS G +DA+ +F M E+++ +WN+ ++
Sbjct: 251 GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQ 310
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +A+ + + +TF + L ACSD G+ LH ++ G NV V
Sbjct: 311 DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIV 370
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N LV Y K + AK VF + ++ V+W +++ + + E + + F R EGV
Sbjct: 371 GNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV 430
Query: 209 EPKDFMISSVLSAC-ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
IS+VL AC A LE G +HA + + + +V ++L+ MY KCG + +
Sbjct: 431 PINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSN 490
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+++ +N WNA++ AH GH + AL EM R + + L+A ++
Sbjct: 491 NIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMR--RAGVNVDEFSFSECLAAAAK 548
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD------------------- 368
+E+G ++ + + +K G + +D+ G+ G +D
Sbjct: 549 LAILEEGQQL-HGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNI 607
Query: 369 ------------RAYEIIKEM---PMRPTISVWGALLNACRVYGKPELGRIAADNLFKL- 412
+A E EM ++P + +LL+AC G E G D++ K
Sbjct: 608 LTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEF 667
Query: 413 -DPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
P G+ V + ++ +GR+ EA+ KEM
Sbjct: 668 GIPAKIGHCVCIIDLLGRSGRFAEAETFIKEM 699
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLEL-GRSVHAVAVKACVEGNIFVGSALVDM 256
+ F R GV+P ++S+++AC R + + G VH VK + ++FVG++LV +
Sbjct: 15 RFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHL 74
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS--MRCEAVPN 314
YG G DA F +M +N+V W A++ Y G M ++ + M S M C N
Sbjct: 75 YGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSC----N 130
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
T+ V+S C G ++ +KYG++ ++ + G G V+ A +
Sbjct: 131 DNTMSSVISTCVSLENELLGYQVL-GHVIKYGLETNVSVANSLISMFGYFGSVEEACYVF 189
Query: 375 KEMPMRPTISVWGALLNA 392
M TIS W +++ A
Sbjct: 190 SGMDEHDTIS-WNSMIAA 206
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/553 (40%), Positives = 335/553 (60%), Gaps = 20/553 (3%)
Query: 39 SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
S + DV + Y+++G D+A ++FDE P +++ TW A +S + + A +
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD----GNVSVCNGLVD 154
F + E + +++ A L +++ ++L FD NVS N ++
Sbjct: 304 FDKM----PERNEVSWNAMLAGYVQGERMEMAKEL--------FDVMPCRNVSTWNTMIT 351
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y +C ++ AK +FD + ++ VSW +M+ Y Q+ ++F+ REG
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SS LS CA + LELG+ +H VK E FVG+AL+ MY KCGSI++A F +M
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEK 333
+++V WN +I GY+ G ++AL FE SM+ E + P+ T+V VLSACS G V+K
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFE---SMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G + FY+MT YG+ P ++HYAC+VDLLGRAGL++ A+ ++K MP P ++WG LL A
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+G EL AAD +F ++P +SG +VLLSN++A++GRW + +R M+D G+KK G
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
SWI ++N+ H F D H EI A L +L MK AGY+ T+ L+DVEEEEK
Sbjct: 649 YSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKER 708
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
V +HSE++A+A+G++ + G PIR+ KNLR+C DCH+A K+++ I GR +I+RDNNRFH
Sbjct: 709 MVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFH 768
Query: 574 RFWDGYCSCSDYW 586
F DG CSC DYW
Sbjct: 769 HFKDGSCSCGDYW 781
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 179/427 (41%), Gaps = 91/427 (21%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G + A K+FDEMPER+L +WN I ++ R G +L
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIK-------------GYVRNRNLGKARELFEI 151
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ CS ++L SG+ NG VD A+ VFD + +
Sbjct: 152 MPERDVCSWNTML------------SGY-----AQNGCVDD---------ARSVFDRMPE 185
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMF-----------------LTARREGVEPKDFMIS- 216
KNDVSW ++L YVQN + E C +F +++ VE + F S
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 217 ---------SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++++ A+ ++ R + ++ V+ ++F +A+V Y + +++A
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFD---ESPVQ-DVFTWTAMVSGYIQNRMVEEAR 301
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+KMPERN V WNA++ GY +MA F+ M C V + T++ + C
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP---CRNVSTWNTMITGYAQC-- 356
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM---RPTIS 384
G + + +F M K +A ++ ++G A + +M R S
Sbjct: 357 -GKISEAKNLFDKMP-----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GNHVLLSNMFAATGRWEEADLVRK 441
+ + L+ C ELG+ L K GN +LL M+ G EEA+ + K
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEEANDLFK 468
Query: 442 EM--KDV 446
EM KD+
Sbjct: 469 EMAGKDI 475
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE N +F + + GKQLH +K G FVG + MY K G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+ +F EM +++ +WN I+ G + A+ F +++R G +PD T A L+A
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 121 CSDCSLLQLGRQ 132
CS L+ GRQ
Sbjct: 520 CSHTGLVDKGRQ 531
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 22/242 (9%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
NG++ Y + E LA+ +FD + +++ VSW M+ YV+N ++F E +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-----EIMP 153
Query: 210 PKDF-MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+D +++LS A+ ++ RSV E N +AL+ Y + +++A +
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSV----FDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F LV WN ++GG+ + A F+ M V + V+ +++ +++
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN------VRDVVSWNTIITGYAQS 263
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +++ ++F ++ + +V + +V+ A E+ +MP R +S W A
Sbjct: 264 GKIDEARQLFDESPVQ-----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNA 317
Query: 389 LL 390
+L
Sbjct: 318 ML 319
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
C + +I + + Y + G +A F +MP + V +N +I GY G ++A F
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+EM + V+ ++ R + K ++F M + + ++
Sbjct: 119 DEMPE------RDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSWNTMLSGY 167
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G VD A + MP + +S W ALL+A
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVS-WNALLSA 197
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/616 (37%), Positives = 345/616 (56%), Gaps = 37/616 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ FTF L + G+Q+HA +++ ++ V MYS+ G + A
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ M ERN +WN+ I G + A+ F ++ G +PD + + L++C S
Sbjct: 535 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---------- 175
Q GR+LH F+VR+ + + LVD Y KC + A V+D I K
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVS 654
Query: 176 ---------------------NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
N W S+L Y ++ FL +E
Sbjct: 655 AFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 714
Query: 215 ISSVLSACARIAGLELGRSVHAVAVK-ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ ++++ C+ + LE G +H++ +K V ++ + +ALVDMY KCG+I A F+ M
Sbjct: 715 MVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+N+V WNA+I GY+ G + AL +EEM + PN VT + +LSACS G VE+
Sbjct: 775 NGKNIVSWNAMISGYSKHGCSKEALILYEEMP--KKGMYPNEVTFLAILSACSHTGLVEE 832
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G++IF SM Y I+ AEHY C+VDLLGRAG ++ A E +++MP+ P +S WGALL AC
Sbjct: 833 GLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ ++GR+AA LF+LDP + G +V++SN++AA GRW+E + +R+ MK G+KK G
Sbjct: 893 RVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPG 952
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
SWI + + I IF A +H + EI L L + K GYIPDT+F L +V++ ++
Sbjct: 953 VSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEE 1012
Query: 514 EVGH---HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
E + HSE++AL+ GLI++P IR+ KNLRICGDCH+A KFIS I GR +I RD N
Sbjct: 1013 EEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTN 1072
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F +G CSC DYW
Sbjct: 1073 RFHHFENGKCSCGDYW 1088
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 219/426 (51%), Gaps = 13/426 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FTF + AL GKQ+H+ + G D FVG + DMY+K ++
Sbjct: 272 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 331
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDEM ERN TWN+ IS G +A+ F+ ++ +G + + + L A + +
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ GR+LHG LVR+ + ++ + + LVD Y KC V A VF ++++N+VS+ ++L
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451
Query: 186 VYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YVQ + E +++ + E G++P F +++L+ CA GR +HA ++A +
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 511
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
NI V + LV MY +CG + A+ FN+M ERN WN++I GY G AL F++M
Sbjct: 512 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ P+ +L +LS+C +KG ++ ++ ++ ++ +VD+ +
Sbjct: 572 QLNGIK--PDCFSLSSMLSSCVSLSDSQKGREL-HNFIVRNTMEEEGILQVVLVDMYAKC 628
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDPNDSGNHVLL 423
G +D A+++ + + I LN V GR A NLF D + N L
Sbjct: 629 GSMDYAWKVYDQTIKKDVI------LNNVMVSAFVNSGRANDAKNLF--DQMEQRNTALW 680
Query: 424 SNMFAA 429
+++ A
Sbjct: 681 NSILAG 686
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 234/480 (48%), Gaps = 40/480 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ N F + AS+ L G++LH +++ D+ +G + DMYSK G+
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
++A ++F + ERN ++NA ++ V G+ + A++ + +++ G +PD TF L
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C++ GRQ+H L+R+ N+ V LV Y +C + AK +F+ + ++N S
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 547
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ Y QN E + ++F + G++P F +SS+LS+C ++ + GR +H V
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 607
Query: 240 KACVEGNIFVGSALVDMYGKCGSI-------------------------------QDAEI 268
+ +E + LVDMY KCGS+ DA+
Sbjct: 608 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKN 667
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F++M +RN WN+I+ GYA++G + + F EM E + +T+V +++ CS
Sbjct: 668 LFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY--DVLTMVTIVNLCSSL 725
Query: 329 GAVEKGMKIFYSMTLKYG-IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+E G ++ +S+ +K G + +VD+ + G + +A + M + +S W
Sbjct: 726 PALEHGDQL-HSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS-WN 783
Query: 388 ALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
A+++ +G + I + + K + PN+ +LS + TG EE + M++
Sbjct: 784 AMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS-ACSHTGLVEEGLRIFTSMQE 842
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 218/450 (48%), Gaps = 17/450 (3%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ FTFP + KA A+ +QL + +K+G ++FVG + D Y++ G DDA
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
DE+ ++ TWNA I+ V + A F + + G PD TF + L C
Sbjct: 234 DEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 293
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+Q+H L+ GF G+ V N L+D Y KC++ VFD + ++N V+W S++
Sbjct: 294 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q + +FL + G + F + S+L A A +A + GR +H V+ + +I
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+GSALVDMY KCG +++A F + ERN V +NA++ GY +G A+ AL + +M S
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQS-E 472
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
P+ T +L+ C+ +G +I ++ ++ I +V + G ++
Sbjct: 473 DGIQPDQFTFTTLLTLCANQRNDNQGRQI-HAHLIRANITKNIIVETELVHMYSECGRLN 531
Query: 369 RAYEIIKEMPMRPTISVWGALL----------NACRVYGKPELGRIAADNLFKLDPNDSG 418
A EI M R S W +++ A R++ + +L I D F L S
Sbjct: 532 YAKEIFNRMAERNAYS-WNSMIEGYQQNGETQEALRLFKQMQLNGIKPD-CFSLSSMLS- 588
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
+ V LS+ + GR +VR M++ GI
Sbjct: 589 SCVSLSD--SQKGRELHNFIVRNTMEEEGI 616
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 179/378 (47%), Gaps = 13/378 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---ADKMFDEMPERNLATWNAYISN 85
GK +H + +G D ++ +Y+++G DD A K+F+EMPERNL WN I
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ + +R +G D TF + + AC + RQL +V++G + N
Sbjct: 150 YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN 209
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ V LVD Y + + A D I + V+W +++ YV+ E +F +
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK 269
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
GV P +F +S L C + + G+ VH+ + +G+ FVG+AL+DMY KC +
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F++M ERN V WN+II A GH + AL F M ++ N L +L A
Sbjct: 330 CLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS--NRFNLGSILMAS 387
Query: 326 SRAGAVEKGMKIFYSMT---LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
+ + KG ++ + L I G + +VD+ + G+V+ A+++ + + R
Sbjct: 388 AGLADIGKGRELHGHLVRNLLNSDIILG----SALVDMYSKCGMVEEAHQVFRSLLERNE 443
Query: 383 ISVWGALLNACRVYGKPE 400
+S + ALL GK E
Sbjct: 444 VS-YNALLAGYVQEGKAE 460
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 163/366 (44%), Gaps = 34/366 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P+ F+ + + +L G++LH +++ + + DMY+K G
Sbjct: 571 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 630
Query: 61 KD-------------------------------DADKMFDEMPERNLATWNAYISNAVLG 89
D DA +FD+M +RN A WN+ ++
Sbjct: 631 MDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANK 690
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF-DGNVSV 148
G K + + F+ + + E D++T +N CS L+ G QLH +++ GF + +V +
Sbjct: 691 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LVD Y KC + A+ VFD + KN VSW +M+ Y ++ + ++ ++G+
Sbjct: 751 ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM 810
Query: 209 EPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P + ++LSAC+ +E G R ++ +E + +VD+ G+ G ++DA+
Sbjct: 811 YPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 870
Query: 268 IAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
KMP E + W A++G DM + + + + + YV + + +A
Sbjct: 871 EFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAG 930
Query: 327 RAGAVE 332
R VE
Sbjct: 931 RWKEVE 936
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 137/289 (47%), Gaps = 7/289 (2%)
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVV 168
+ + + + C D + Q G+ +H ++ +G++ + + ++ Y + +++ A+ +
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
F+ + ++N +W +M++ Y + + +++ R G F SV+ AC + +
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
R + + VKA + N+FVG ALVD Y + G + DA + +++ ++V WNA+I GY
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ A F+ M ++ P+ T L C + + G ++ +S + G K
Sbjct: 252 VKILSWEEAWGIFDRM--LKIGVCPDNFTFASALRVCGALRSRDGGKQV-HSKLIACGFK 308
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ + + ++ EM R ++ W ++++A +G
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT-WNSIISAEAQFG 356
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 353/618 (57%), Gaps = 51/618 (8%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL----- 60
+ P+ FP + K+ + L G+ LH ++ G D++ G + +MYSK
Sbjct: 102 LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 61 ---------------------------KDDADKMFDEMPERNLATWNAYISNAVLGGRPK 93
+D K+F+ MPE++L +W N ++ G +
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSW-----NTIIAGNAR 216
Query: 94 NAI--DAFINLRRTGG---EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
N + + +R GG +PD T + L ++ + G+++HG +R G D ++ V
Sbjct: 217 NGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV 276
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y KC V + VF + +++ +SW S++ VQN + G + F +
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+PK + SS++ ACA + L LG+ +H + + NIF+ S+LVDMY KCG+I+ A+
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F++M R++V W A+I G A G A A+ FE+M + +A VL+ACS
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKA---------VLTACSHG 447
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++ K F SMT +GI PG EHYA V DLLGRAG ++ AY+ I M + PT S+W
Sbjct: 448 GLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWAT 507
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+ACRV+ ++ A+ + ++DPN++G ++LL+N+++A RW+EA R M+ +GI
Sbjct: 508 LLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGI 567
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+K CSWI VKN+++ F A D SH +I+ + L E M+ GY+PDT+ +DVEE
Sbjct: 568 RKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEE 627
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E+K V HSE++A+ FG+I P G+ IR+TKNLR+C DCH+A KFIS IVGRE++VRD
Sbjct: 628 EQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRD 687
Query: 569 NNRFHRFWDGYCSCSDYW 586
N+RFH F +G CSC DYW
Sbjct: 688 NSRFHHFKNGTCSCGDYW 705
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 179/402 (44%), Gaps = 37/402 (9%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+QLHA LK Q + +YS L D+ ++F+ + W + I
Sbjct: 25 AQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTS 83
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P ++ +FI + +G PD F + L +C+ L LG LHG+++R G D ++
Sbjct: 84 HGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYT 143
Query: 149 CNGLVDFYGKC--------NEVGLAKV------------------------VFDGIIDKN 176
N L++ Y K +G +V +F+ + +K+
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ +N E +M ++P F +SSVL A + G+ +H
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+++ ++ +I+V S+L+DMY KC + D+ F + ER+ + WN+II G G D
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F +M + + P + ++ AC+ + G ++ +T + G +
Sbjct: 324 GLRFFRQMLMAKIK--PKSYSFSSIMPACAHLTTLHLGKQLHGYIT-RNGFDENIFIASS 380
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+VD+ + G + A +I M +R +S W A++ C ++G+
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALHGQ 421
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/535 (41%), Positives = 325/535 (60%), Gaps = 7/535 (1%)
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
+MY K GL DA +FD+MP+RN+ +W IS A++ + + R G P++
Sbjct: 7 INMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNM 66
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
T+ + L AC L L RQLH +++ G D +V V + L+D Y + E+ A VFD
Sbjct: 67 FTYSSVLRACD--GLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDE 123
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
++ + V W S++ + QN + + ++F +R G + ++SVL AC +A LELG
Sbjct: 124 MVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELG 183
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R VH +K + ++ + +AL+DMY KCGS++DA F +M E++++ W+ +I G A
Sbjct: 184 RQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQN 241
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G++ AL FE M + + PNYVT+V VL ACS AG VE+G+ F+SM +GI PG
Sbjct: 242 GYSKEALKLFESMKVLGIK--PNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C++DLLGRAG + A ++I EM P W ALLNACRV+ ++ AA + +
Sbjct: 300 EHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP D+G +VLLSN++A T RW + VR+ M + GIKK GCSWI V +IH F D
Sbjct: 360 LDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDR 419
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + EI L +L ++ GY+PDTNF L D+E E+ + +HSEK+A+ FGL+++
Sbjct: 420 SHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSL 479
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P G IRI KNLRICGDCH K ++ + R +++RD R+H F DG CSC D+W
Sbjct: 480 PRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 163/329 (49%), Gaps = 7/329 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE + PN FT+ + +A L +QLH +K G DVFV + D+YS+ G
Sbjct: 57 MLREGVRPNMFTYSSVLRACDGL---FNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGE 113
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++FDEM +L W++ I+ A+ F ++R G T + L A
Sbjct: 114 LENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRA 173
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +LL+LGRQ+H +++ +D ++ + N L+D Y KC + A VF +++K+ +SW
Sbjct: 174 CTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ QN + ++F + + G++P I VL AC+ +E G H++
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
++ ++D+ G+ G + +A N+M E + V W A++ + D+A+
Sbjct: 292 LFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAI 351
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ +++ + + YV L + + R
Sbjct: 352 HAAKQILRLDPQDAGTYVLLSNIYANTQR 380
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ N L++ Y K + A+ VFD + D+N VSW +M+ Y + + + REG
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P F SSVL AC + L R +H +K ++ ++FV SAL+D+Y + G +++A
Sbjct: 62 VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M +LV W++II G+A D AL F+ M R + TL VL AC+
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMK--RAGFLAQQTTLTSVLRACTG 176
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+E G ++ + LKY + ++D+ + G ++ A + M + IS W
Sbjct: 177 LALLELGRQV-HVHVLKYDQDLILNN--ALLDMYCKCGSLEDANAVFVRMVEKDVIS-WS 232
Query: 388 ALLN--ACRVYGKPELGRIAADNLFKLDPN 415
++ A Y K L + + + PN
Sbjct: 233 TMIAGLAQNGYSKEALKLFESMKVLGIKPN 262
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 47/237 (19%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+ + L++MY K G + DA+ F+KMP+RN+V W +I Y+ D AL E + M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKAL---EFLVLM 57
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E V PN T VL AC ++ + +K G+ + ++D+ R G
Sbjct: 58 LREGVRPNMFTYSSVLRACDGLF----NLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGE 113
Query: 367 VDRAYEIIKEMPMRPTISVWGAL-----------------------------------LN 391
++ A + EM + + VW ++ L
Sbjct: 114 LENALRVFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLR 172
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD--LVRKEMKDV 446
AC ELGR ++ K D + N+ LL +M+ G E+A+ VR KDV
Sbjct: 173 ACTGLALLELGRQVHVHVLKYDQDLILNNALL-DMYCKCGSLEDANAVFVRMVEKDV 228
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/558 (43%), Positives = 332/558 (59%), Gaps = 2/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G + LA+K G +V +YSK G + A +F ++ + +L ++NA IS
Sbjct: 226 GMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTC 285
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
++++ F L +G + + + + L L R +HGF +SG N SV
Sbjct: 286 NNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSV 345
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L Y + NE+ A+++FD +K+ SW +M+ Y QN E +F ++ V
Sbjct: 346 STALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEV 405
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++S+LSACA++ L LG+ VH + + E NIFV +AL+DMY KCGSI +A+
Sbjct: 406 RPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQR 465
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPE+N V WNA+I GY G+ AL+ F EM R P VT + VL ACS A
Sbjct: 466 LFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVS--PTGVTFLSVLYACSHA 523
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V +G +IF SM +G +P EHYAC+VDLLGRAG +D+A + I++MP+ P VWGA
Sbjct: 524 GLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGA 583
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL AC ++ L R+A+D LF+LDP + G +VLLSN+++A + EA VR +K +
Sbjct: 584 LLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKL 643
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K GC+ I V N +HIF + D SH + T I AML KL +M+ AG+ +T AL+DVEE
Sbjct: 644 AKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEE 703
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK V HSEK+A+AFGLI PG IRI KNLR+C DCH+A KFIS I R ++VRD
Sbjct: 704 EEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRD 763
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F DG CSC DYW
Sbjct: 764 ANRFHHFKDGICSCGDYW 781
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 4/354 (1%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+FVG + Y K A K+FD M ER+ WN +S V AI F ++
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ G D T A L ++ L LG + ++ GF + V GL Y KC E+
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+++F I + VS+ +M+ Y N E E+ ++F G + I ++
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
L L R +H K+ V N V +AL +Y + I+ A + F++ E++L WNA
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I GYA G + A+S F+EM +CE PN VT+ +LSAC++ GA+ G K + +
Sbjct: 380 MISGYAQNGLTEKAISLFQEM--QKCEVRPNPVTVTSILSACAQLGALSLG-KWVHDLIN 436
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + ++D+ + G + A + MP + ++ W A+++ ++G
Sbjct: 437 RESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT-WNAMISGYGLHG 489
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ + PN T + A + L GK +H L + ++FV + DMY+K G
Sbjct: 400 MQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGS 459
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F MPE+N TWNA IS L G A++ F + + P +TF + L A
Sbjct: 460 ITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYA 519
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGK 158
CS L++ G ++ +V GF+ +VD G+
Sbjct: 520 CSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 335/615 (54%), Gaps = 29/615 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE N F F + K + G +HA K G + FVG + D YS G
Sbjct: 130 LHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGR 189
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD + +++ +W ++ K A+ F +R G +P+ TF + A
Sbjct: 190 VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKA 249
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +G+ +HG ++S ++ ++ V L+D Y K ++ A+ F+ I K+ + W
Sbjct: 250 CLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPW 309
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y Q+ + + +MF R+ V P F +SVL ACA + GL LG +H +K
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK 369
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++FV +AL+D+Y KCG ++++ F + P RN V WN +I G+ G + AL
Sbjct: 370 IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRL 429
Query: 301 FEEMTSMRCEAV-----------------------------PNYVTLVCVLSACSRAGAV 331
F M R +A P+ +T V VLSAC+ AG +
Sbjct: 430 FLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLL 489
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++G F SM +GI+P EHY C+V LLGR G +D+A ++I E+P +P++ VW ALL
Sbjct: 490 DQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLG 549
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
AC ++ ELGRI+A + +++P D HVLLSNM+A RW+ VRK MK G+KK
Sbjct: 550 ACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKE 609
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
G SWI + +H F DTSH I ML L + K AGYIP+ N L DVE+EEK
Sbjct: 610 PGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEK 669
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSE++AL+FG+I P G PIRI KNLRIC DCH+A K IS +V RE++VRD NR
Sbjct: 670 ERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINR 729
Query: 572 FHRFWDGYCSCSDYW 586
FH F +G CSC DYW
Sbjct: 730 FHHFQEGLCSCGDYW 744
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 184/365 (50%), Gaps = 4/365 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P GK LH LK G D+F +MY K+ DA K+FDEMPERN ++ I
Sbjct: 54 PSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQG 113
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
R AI+ F+ L R G E + F L +LG +H + + G + N
Sbjct: 114 YAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESN 173
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V L+D Y C V +A+ VFDGI+ K+ VSW M+ + +N + ++F R
Sbjct: 174 AFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRM 233
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G +P +F +SV AC + ++G+SVH A+K+ E +++VG AL+D+Y K G I D
Sbjct: 234 VGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDD 293
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A AF ++P+++++ W+ +I YA + A+ F +M + +PN T VL AC
Sbjct: 294 ARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR--QALVLPNQFTFASVLQAC 351
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ + G +I + +K G+ ++D+ + G ++ + E+ E P R ++
Sbjct: 352 ATMEGLNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT- 409
Query: 386 WGALL 390
W ++
Sbjct: 410 WNTVI 414
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 208 VEPKDF---MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V P +F ++ L C + G+ +H +K ++F + L++MY K +
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F++MPERN + + +I GYA A+ F + E P T + L
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ G + G+ ++ K G + A ++D G VD A E+ + + +S
Sbjct: 151 STDCGELGWGI---HACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS 207
Query: 385 VWGALLN 391
W ++
Sbjct: 208 -WTGMVT 213
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 332/580 (57%), Gaps = 4/580 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ FT L A L GKQLH+ ++SG DVFVGC+ DMY+K+ +++ K
Sbjct: 245 TPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRK 304
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F+ M N+ +W A IS V + + AI F N+ P+ TF + L AC+
Sbjct: 305 IFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPD 364
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+G+QLHG ++ G V N L++ Y + + A+ F+ + +KN +S+ +
Sbjct: 365 FGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA 424
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ + + GV F + +LS A I + G +HA+ VK+ N
Sbjct: 425 NAKALDSDESFNH--EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN 482
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+ MY KCG+ + A FN M RN++ W +II G+A G A AL F EM
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ + PN VT + VLSACS G +++ K F SM + I P EHYAC+VDLLGR+GL
Sbjct: 543 IGVK--PNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGL 600
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A E I MP VW L +CRV+ +LG AA + + +P+D ++LLSN+
Sbjct: 601 LLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNL 660
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A+ GRW++ +RK MK + K G SWI V N++H F DTSH + +I L +L
Sbjct: 661 YASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDEL 720
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K GYIP+T+F L+DVE+E+K + HSEKIA+A+ LI+ P PIR+ KNLR+C
Sbjct: 721 ALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVC 780
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH+A K+IS + GRE++VRD NRFH DG CSC+DYW
Sbjct: 781 GDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 201/397 (50%), Gaps = 8/397 (2%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD-VFVGCSAFDMYSKTGLK 61
R I PN++ F L ++ S TG + A LK+G V VGC+ DM++K GL
Sbjct: 138 RNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLD 197
Query: 62 DDADKM-FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +M FD+M +NL TW I+ G +A+D F L + PD T + L+A
Sbjct: 198 IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSA 257
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + LG+QLH +++RSG +V V LVD Y K V ++ +F+ ++ N +SW
Sbjct: 258 CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ YVQ+ +E+ ++F V P F SSVL ACA + +G+ +H +K
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK 377
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ VG++L++MY + G+++ A AFN + E+NL+ +N A +D + +
Sbjct: 378 LGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNH 437
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
E T + A P T C+LS + G + KG +I +++ +K G ++ +
Sbjct: 438 EVEHTGV--GASP--FTYACLLSGAACIGTIVKGEQI-HALIVKSGFGTNLCINNALISM 492
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A ++ +M R I+ W ++++ +G
Sbjct: 493 YSKCGNKEAALQVFNDMGYRNVIT-WTSIISGFAKHG 528
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 17/306 (5%)
Query: 99 FINLRRTGGEPDLITFCAF------LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
F +LR+ DL T L AC L+LG+ LH L+ SG + + N L
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80
Query: 153 VDFYGKCNEVGLAKVVFD--GIIDKNDVSWCSMLVVYVQNYEEENGCQMF---LTARREG 207
+ Y KC + A +F G ++ VSW +++ + N E F L R
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKCG-SIQD 265
+ P ++ +++L +C+ G ++ A +K + ++ VG AL+DM+ K G IQ
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQS 200
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + F+KM +NLV W +I Y+ G D A+ F + + E P+ TL +LSAC
Sbjct: 201 ARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRL--LVSEYTPDKFTLTSLLSAC 258
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
G K +S ++ G+ +VD+ ++ V+ + +I M + +
Sbjct: 259 VELEFFSLG-KQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMS 316
Query: 386 WGALLN 391
W AL++
Sbjct: 317 WTALIS 322
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + FT+ CL ++ + V G+Q+HAL +KSG ++ + + MYSK G K+ A
Sbjct: 444 VGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAAL 503
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F++M RN+ TW + IS G A++ F + G +P+ +T+ A L+ACS
Sbjct: 504 QVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563
Query: 126 LL 127
L+
Sbjct: 564 LI 565
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 354/626 (56%), Gaps = 49/626 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D T + +++ GKQ H A+ S I ++FVG DMY+K G+ D+A+ +
Sbjct: 227 PDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTV 286
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR----------------------- 104
F MP +++ +WNA ++ GR ++A+ F ++
Sbjct: 287 FSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 105 ------------TGGEPDLITFCAFLNACSDCSLLQLGRQLHGF-------LVRSGFDGN 145
+G +P+ +T + L+ C+ L G+++H + L ++G
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDE 406
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
V N L+D Y KC +V +A+ +FD + +++ V+W M+ Y Q+ + ++
Sbjct: 407 NMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 204 RREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-NIFVGSALVDMYGKC 260
E + P F IS L ACA +A L +G+ +HA A++ +FV + L+DMY KC
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G I DA + F+ M E+N V W +++ GY G+ + AL FEEM R + VTL+
Sbjct: 527 GDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR--RIGFKLDGVTLLV 584
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL ACS +G +++GM+ F M +G+ PG EHYAC+VDLLGRAG ++ A +I+EMPM
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
P VW ALL+ CR++GK ELG AA + +L N+ G++ LLSNM+A GRW++ +R
Sbjct: 645 PPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIR 704
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN 500
M+ GIKK GCSW+ F D +H EI +L+ + +K GY+P+T
Sbjct: 705 SLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETG 764
Query: 501 FALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
FAL+DV++EEK + HSEK+ALA+G++ P G IRITKNLR+CGDCH+AF ++S I+
Sbjct: 765 FALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRII 824
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
E+I+RD++RFH F +G CSC YW
Sbjct: 825 DHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 203/440 (46%), Gaps = 48/440 (10%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+++TFP +FKA + G HAL+ +G + +VFVG + MYS+ G DA K
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARK 183
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLITFCAFLNACSDCS 125
+FDEMP ++ +WN+ I + G+PK A++ F + G PD IT L C+
Sbjct: 184 VFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVG 243
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LG+Q HGF V S N+ V N LVD Y K + A VF + K+ VSW +M+
Sbjct: 244 TRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVA 303
Query: 186 VYVQNYEEENGCQMFLTARRE-----------------------------------GVEP 210
Y Q E+ ++F + E G++P
Sbjct: 304 GYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVE-------GNIFVGSALVDMYGKCGSI 263
+ + SVLS CA + L G+ +H A+K ++ V + L+DMY KC +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 264 QDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
A F+ + ER++V W +IGGY+ G A+ AL EM C+ PN T+ C
Sbjct: 424 DIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 322 LSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
L AC+ A+ G +I Y++ + P C++D+ + G + A + M M
Sbjct: 484 LVACASLAALSIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGDIGDARLVFDNM-ME 541
Query: 381 PTISVWGALLNACRVYGKPE 400
W +L+ ++G E
Sbjct: 542 KNEVTWTSLMTGYGMHGYGE 561
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 167/388 (43%), Gaps = 43/388 (11%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN+ I + GR + +F + PD TF AC + S ++ G H
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+GF NV V N LV Y +C + A+ VFD + + VSW S++ Y + + + +
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 199 MFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
MF E G P D + +VL CA + LG+ H AV + + N+FVG+ LVDMY
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC-------- 309
K G + +A F+ MP +++V WNA++ GY+ G + A+ FE+M +
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 310 -------------EAV------------PNYVTLVCVLSACSRAGAVEKGMKIF-----Y 339
EA+ PN VTL+ VLS C+ GA+ G +I Y
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 340 SMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVY 396
M L+ G E+ ++D+ + VD A + + P + W ++ +
Sbjct: 395 PMDLRKN-GHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLS 424
G +F+ D N +S
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTIS 481
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 14/327 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALAL-------KSGQIHDVFVGCSAFDMYSKT 58
I PN+ T + +++ + GK++H A+ K+G + V DMY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420
Query: 59 GLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITF 114
D A MFD + ER++ TW I G A++ + + P+ T
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L AC+ + L +G+Q+H + +R+ + + V N L+D Y KC ++G A++VFD ++
Sbjct: 481 SCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMM 540
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+KN+V+W S++ Y + E +F RR G + + VL AC+ ++ G
Sbjct: 541 EKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 234 -VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQ 291
+ + V + LVD+ G+ G + A +MP E V W A++
Sbjct: 601 YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIH 660
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTL 318
G ++ + +++T + +Y L
Sbjct: 661 GKVELGEYAAKKITELASNNDGSYTLL 687
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 352/588 (59%), Gaps = 8/588 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
R E + N+ T + A S H ++ K++H A + G + D V + Y+K
Sbjct: 393 REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSL 452
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A+++F M + +++WNA I G P ++D F+ + +G +PD T + L AC
Sbjct: 453 DCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L+ G+++HGF++R+G + + + L+ Y +C+ + L K++FD + +K+ V W
Sbjct: 513 ARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWN 572
Query: 182 SMLVVYVQNYEEENGCQMFLTARRE---GVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
M+ + QN E C+ T R+ G++P++ ++ VL AC++++ L LG+ VH+ A
Sbjct: 573 VMITGFSQN---ELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFA 629
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+KA + + FV AL+DMY KCG ++ ++ F+++ E++ WN II GY GH A+
Sbjct: 630 LKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAI 689
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
FE M + P+ T + VL AC+ AG V +G+K M YG+KP EHYACVV
Sbjct: 690 ELFELMQNKG--GRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVV 747
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
D+LGRAG + A +++ EMP P +W +LL++CR YG E+G + L +L+PN +
Sbjct: 748 DMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAE 807
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N+VLLSN++A G+W+E VR+ MK+ G+ K AGCSWI + ++ F D S + +
Sbjct: 808 NYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKK 867
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
IQ KL +++ GY PDT+ L+++EEE K+ + HSEK+A++FGL+ G +R
Sbjct: 868 IQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLR 927
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ KNLRIC DCH+A K +S +V R++IVRDN RFH F +G C+C D+W
Sbjct: 928 VCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 9/418 (2%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
E + P+ T + A +A+ G +H LA K G +V V S DMYSK G
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNA 120
+A +FD +N+ +WN I G + + ++R + +T L A
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPA 410
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L +++HG+ R GF + V N V Y KC+ + A+ VF G+ K SW
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + QN +FL G++P F I S+L ACAR+ L G+ +H ++
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+E + F+G +L+ +Y +C S+ ++ F+KM ++LVCWN +I G++ AL +
Sbjct: 531 NGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDT 590
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M S + P + + VL ACS+ A+ G ++ +S LK + A ++D+
Sbjct: 591 FRQMLSGGIK--PQEIAVTGVLGACSQVSALRLGKEV-HSFALKAHLSEDAFVTCALIDM 647
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
+ G ++++ I + + +VW ++ ++G + A LF+L N G
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDE-AVWNVIIAGYGIHGHG----LKAIELFELMQNKGG 700
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 7/347 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P++FT PC+ KA + + G+ +HALALK+G D FVG + MY K G + A
Sbjct: 191 LAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAV 250
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL---RRTGGEPDLITFCAFLNACS 122
K+F+ M RNL +WN+ + G F L G PD+ T + AC+
Sbjct: 251 KVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACA 310
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+++G +HG + G V+V N LVD Y KC +G A+ +FD KN VSW +
Sbjct: 311 AVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNT 370
Query: 183 MLVVYVQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ Y + + ++ +R E V + + +VL AC+ L + +H A +
Sbjct: 371 IIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRH 430
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ V +A V Y KC S+ AE F M + + WNA+IG +A G +L F
Sbjct: 431 GFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLF 490
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ M P+ T+ +L AC+R + G +I + L+ G++
Sbjct: 491 --LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEI-HGFMLRNGLE 534
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 180/378 (47%), Gaps = 10/378 (2%)
Query: 28 TGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+++HAL S ++ +DV + MYS G D+ +FD E++L +NA +S
Sbjct: 110 VGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGY 169
Query: 87 VLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
++AI F+ L T PD T AC+ + ++LG +H +++G +
Sbjct: 170 SRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSD 229
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF---LT 202
V N L+ YGKC V A VF+ + ++N VSW S++ +N C +F L
Sbjct: 230 AFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLI 289
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ EG+ P + +V+ ACA + + +G VH +A K + + V ++LVDMY KCG
Sbjct: 290 SEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGY 349
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
+ +A F+ +N+V WN II GY+ +G +EM R E V N VT++ V
Sbjct: 350 LGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEM--QREEKVRVNEVTVLNV 407
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L ACS + +K + ++G V + +D A + M +
Sbjct: 408 LPACSGEHQL-LSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGK- 465
Query: 382 TISVWGALLNACRVYGKP 399
T+S W AL+ A G P
Sbjct: 466 TVSSWNALIGAHAQNGFP 483
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 16/323 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC + +GR++H + S +V + ++ Y C ++ VFD +K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTA-RREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ + ++L Y +N + +FL + P +F + V ACA +A +ELG +V
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+A+KA + FVG+AL+ MYGKCG ++ A F M RNLV WN+++ + G
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 295 DMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
F+ + E VP+ T+V V+ AC+ G V GM + + + K GI
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHGLAFKLGITEEVTV 336
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTIS----VWG--------ALLNACRVYGKPEL 401
+VD+ + G + A + + +S +WG + + + E
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396
Query: 402 GRIAADNLFKLDPNDSGNHVLLS 424
R+ + + P SG H LLS
Sbjct: 397 VRVNEVTVLNVLPACSGEHQLLS 419
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
I +L AC + +GR VHA V+ + ++ + + ++ MY CGS D+ F+
Sbjct: 95 IGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E++L +NA++ GY+ A+S F E+ S + P+ TL CV AC+ VE
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSAT-DLAPDNFTLPCVAKACAGVADVEL 213
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G + +++ LK G A ++ + G+ G V+ A ++ + M R +S W +++ AC
Sbjct: 214 GEAV-HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVS-WNSVMYAC 271
Query: 394 RVYG 397
G
Sbjct: 272 SENG 275
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/589 (38%), Positives = 348/589 (59%), Gaps = 6/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + +S + T L L ++G +H A+K G D+FV + +MY+K G
Sbjct: 231 MRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGE 290
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F++M R++ +WN+ ++ +P A+ + + G PDL+T + +
Sbjct: 291 LRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASV 350
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
++ R +HGF+ R F ++++ N ++D Y K + A+ VF+G+ K+ +S
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVIS 410
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W S++ Y QN ++ + R G P S+L+A +++ L+ G H
Sbjct: 411 WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K + +IFV + LVDMYGKCG + DA F ++P ++ V WNAII + G+ A+
Sbjct: 471 IKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAV 530
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F+EM S E V P+++T V +LSACS +G V++G F M YGI+P +HY C+
Sbjct: 531 KLFKEMQS---EGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCM 587
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDL GRAG +++A+ +K MP+RP +SVWGALL ACR++ EL R +D+L K++ +
Sbjct: 588 VDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENV 647
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VLLSN++A G WE D VR +D G+KK G S I V +I +F + +H +
Sbjct: 648 GYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCE 707
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI + L L +MK+ GY+PD NF L DVE++EK + HSE++A+AFG+I+ PP +
Sbjct: 708 EIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTL 767
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+I KNLR+CGDCH+A KFIS I RE+IVRD+NRFH F DG CSC DYW
Sbjct: 768 QIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 200/393 (50%), Gaps = 7/393 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + +TFP + +A L G+++H L LK G DV++ S YS+ G A
Sbjct: 138 LQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLAC 194
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M R++ TWNA IS L G+ A++ F +R D +T + L C
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G +H + ++ G + ++ VCN L++ Y K E+ A+ +F+ + ++ VSW S+L
Sbjct: 255 DIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLA 314
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VE 244
+ QN + ++ GV P + S+ S A + RS+H + C
Sbjct: 315 AFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFL 374
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I +G+A++DMY K G I A F +P ++++ WN++I GY+ G A+ A+ + M
Sbjct: 375 HDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM 434
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
AVPN T V +L+A S+ GA+++GMK + +K + C+VD+ G+
Sbjct: 435 -RYYSGAVPNQGTWVSILTAHSQLGALKQGMKA-HGQLIKNFLYFDIFVSTCLVDMYGKC 492
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G + A + E+P + ++S W A+++ ++G
Sbjct: 493 GKLADALSLFYEVPHQSSVS-WNAIISCHGLHG 524
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 194/399 (48%), Gaps = 13/399 (3%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
+ F +F + +H+ KQLHAL + SG+ +F+ + Y+ G A FD
Sbjct: 43 EIDFNRIFLYCTKVHL---AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFD 99
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQ 128
++ +++ TWN+ IS G A+D F T + D TF + AC + L
Sbjct: 100 QIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LD 156
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GR++H +++ GF+ +V + + FY + V LA +FD ++ ++ +W +M+ +
Sbjct: 157 DGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFY 216
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
N + ++F R + V ISS+L C ++ + G +H A+K +E ++F
Sbjct: 217 LNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLF 276
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +AL++MY K G ++ AE FN+M R++V WN+++ + +AL + +M S+
Sbjct: 277 VCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSI- 335
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
VP+ +TLV + S + G I +T + ++D+ + G +D
Sbjct: 336 -GVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFID 394
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
A ++ + +P++ IS W +L+ Y + L A D
Sbjct: 395 SARKVFEGLPVKDVIS-WNSLITG---YSQNGLANEAID 429
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E ++ + + C ++ L + +HA+ V + +IF+ + L++ Y G I A +
Sbjct: 40 EKREIDFNRIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ +++ WN++I YA GH A+ F E S +Y T V+ AC
Sbjct: 97 TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHY-TFPPVIRAC--- 152
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G ++ G K+ + + LK G + A + R G V A + M +R I W A
Sbjct: 153 GNLDDGRKV-HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRD-IGTWNA 210
Query: 389 LLNACRVYGK 398
+++ + GK
Sbjct: 211 MISGFYLNGK 220
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/571 (39%), Positives = 333/571 (58%), Gaps = 7/571 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L + + HI +Q+HA + +G + D+ + Y++ DDA +FD + R+
Sbjct: 10 LLRCRNVFHI----RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRD 65
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
TW+ + G F L R G PD T + C D + LQ+GR +H
Sbjct: 66 SKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
+++ G + VC LVD Y KC V A+ +F+ ++ K+ V+W M+ Y E+
Sbjct: 126 VVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYES 185
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
+F R EGV P + +V++ACA++ + R + V+ ++ +G+A++D
Sbjct: 186 -LVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMID 244
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MY KCGS++ A F++M E+N++ W+A+I Y + G A+ F M S C +PN
Sbjct: 245 MYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLS--CAILPNR 302
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
VT V +L ACS AG +E+G++ F SM ++ ++P +HY C+VDLLGRAG +D A +I+
Sbjct: 303 VTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIE 362
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEE 435
M + +W ALL ACR++ K EL AA++L +L P + G++VLLSN++A G+WE+
Sbjct: 363 AMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEK 422
Query: 436 ADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGY 495
R M +KK G +WI V N+ + F D SH ++ EI ML L ++++ AGY
Sbjct: 423 VAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGY 482
Query: 496 IPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKF 555
+PDT+F L DVEEE K + HSEK+A+AFGLIAIP G PIRI+KNLR+CGDCH+ K
Sbjct: 483 VPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKM 542
Query: 556 ISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+S I+ R +IVRD NRFH F DG CSC DYW
Sbjct: 543 VSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P+ + A + L + + +++G DV +G + DMY+K G
Sbjct: 192 MREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGS 251
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD M E+N+ +W+A I+ GR K+AID F + P+ +TF + L A
Sbjct: 252 VESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYA 311
Query: 121 CSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G R + +V +VD G+ + A + + + ++K++
Sbjct: 312 CSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDER 371
Query: 179 SWCSML 184
W ++L
Sbjct: 372 LWSALL 377
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/586 (38%), Positives = 343/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN FT+PC+ + + G+Q+H+L++K+G D++V DMYSK
Sbjct: 337 MQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRC 396
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+ + + +R++ +W + I+ V + A+ F ++ G PD I + +A
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++ G Q+H + SG+ ++S+ N LV+ Y +C A +F I K++++W
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITW 516
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ E +F+ + G + F S +SA A +A ++ G+ VH AVK
Sbjct: 517 NGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK 576
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V +AL+ +YGKCGSI+DA++ F++M RN V WN II + G AL
Sbjct: 577 TGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDL 636
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + PN VT + VL+ACS G VE+G+ F SM+ YG+ P +HYACVVD+
Sbjct: 637 FDQMKQEGLK--PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDI 694
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +DRA + EMP+ +W LL+AC+V+ E+G +AA +L +L+P+DS ++
Sbjct: 695 LGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASY 754
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN +A TG+W D VRK MKD GI+K G SWI VKN +H F D H + +I
Sbjct: 755 VLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIY 814
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L++L + + GY + ++ E+E+K HSEK+A+AFGL+ +PP +P+R+
Sbjct: 815 KFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVI 874
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHS KF S + RE+++RD RFH F G CSC DYW
Sbjct: 875 KNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 188/401 (46%), Gaps = 7/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P + + A + + G+ +HA K + FVG + +Y G
Sbjct: 135 MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGS 194
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +M + T+N IS G + A+ F ++ +G PD +T + L A
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAA 254
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQ G+QLH +L+++G + L+D Y KC ++ A +F+ N V W
Sbjct: 255 CASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q + ++F + G+ P F +L C +ELG +H++++K
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +++V L+DMY K + A + +R++V W ++I GY + AL++
Sbjct: 375 NGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALAT 434
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM C P+ + L SAC+ A+ +G++I ++ G + +V+L
Sbjct: 435 FKEMQD--CGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNL 491
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
R G + A+ + +E+ + I+ W L++ +G+ L
Sbjct: 492 YARCGRSEEAFSLFREIDHKDEIT-WNGLISG---FGQSRL 528
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 199/422 (47%), Gaps = 14/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ T L A +++ GKQLH+ LK+G D S D+Y K G
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGD 295
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ N+ WN + + + F ++ TG P+ T+ L
Sbjct: 296 IETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRT 355
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++LG Q+H +++GF+ ++ V L+D Y K + A+ + + + ++ VSW
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSW 415
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ E F + GV P + ++S SACA I + G +HA
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I + + LV++Y +CG ++A F ++ ++ + WN +I G+ + AL
Sbjct: 476 SGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMV 535
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M+ + A N T + +SA + +++G ++ + +K G E ++ L
Sbjct: 536 FMKMS--QAGAKYNVFTFISAISALANLADIKQGKQV-HGRAVKTGHTSETEVANALISL 592
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------LDP 414
G+ G ++ A I EM +R +S W ++ +C +G+ + A +LF L P
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRG----LEALDLFDQMKQEGLKP 647
Query: 415 ND 416
ND
Sbjct: 648 ND 649
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 177/361 (49%), Gaps = 6/361 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++HA ++ G D +G D+Y+K GL A ++F E+ R+ +W A +S G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
K A + + T P + L+AC+ L GR +H + + F V N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y LA+ VF ++ + V++ +++ + Q E Q+F + G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
++S+L+ACA + L+ G+ +H+ +KA + + +L+D+Y KCG I+ A F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
N N+V WN ++ Y +D+A SFE M+ + PN T C+L C+ G
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQI--SDLA-KSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E G +I +S+++K G + ++D+ + +D+A +I++ + R +S W ++
Sbjct: 361 QIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVS-WTSM 418
Query: 390 L 390
+
Sbjct: 419 I 419
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/549 (41%), Positives = 336/549 (61%), Gaps = 12/549 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++FV + DMYSK GL +A ++FD+MP+++ W A I G + A+ +F +++
Sbjct: 305 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 364
Query: 104 RTG-GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
R G D FC+ L+A L + +H + ++GF+ V+V N L+D Y K +V
Sbjct: 365 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 424
Query: 163 GLAKVVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
A V ID N VS SM+ Y++ E +++ RR+GVEP +F SS++
Sbjct: 425 ESASRVLK--IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMI 482
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
CA A LE G +HA +K + + FVGS LVDMYGKCG I + FN++ R +
Sbjct: 483 KGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDI 542
Query: 280 CWNAIIGGYAHQGHADMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
WNA+I +A GH A+ +F+ M + +R PN++ V +L+ACS AG V++G+K
Sbjct: 543 AWNAVINVFAQHGHGREAIQAFDRMIYSGIR----PNHIAFVSLLTACSHAGLVDEGLKY 598
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
FYSM +GI+P EHY+C++D GRAG +D AY+ I EMP++P W +LL ACR+ G
Sbjct: 599 FYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 658
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
ELG +AA NL KL+P ++G HV LS ++A+ G+WE+ VRK M+D IKK G SW+
Sbjct: 659 SKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWV 718
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
+ H+F ++D SH + +I L +L +K GYIPDT+F ++E+ K + +
Sbjct: 719 DSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRY 778
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSE+IA+AF LI++P PI + KNLRIC DCH+AFKFI + R++IVRDN+RFH F +
Sbjct: 779 HSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVN 838
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 839 GRCSCGDYW 847
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 162/372 (43%), Gaps = 8/372 (2%)
Query: 29 GKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ LHA L L F+ MYS A ++F MP RN +W +S
Sbjct: 189 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 248
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+A+ AF +RR G P + A + R GFD +
Sbjct: 249 QNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELF 307
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V + L D Y KC + A VFD + K+ V+W +M+ Y +N E F +REG
Sbjct: 308 VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 367
Query: 208 VEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ D + SVLSA + L +S+H KA E + V +AL+DMY K ++ A
Sbjct: 368 LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 427
Query: 267 EIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
P N+V ++I GY + AL + E+ E PN T ++ C
Sbjct: 428 SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE--PNEFTFSSMIKGC 485
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +E+G ++ ++ +K + + + +VD+ G+ GL+ + ++ E+ R I+
Sbjct: 486 AMQALLEQGAQL-HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA- 543
Query: 386 WGALLNACRVYG 397
W A++N +G
Sbjct: 544 WNAVINVFAQHG 555
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 159/402 (39%), Gaps = 57/402 (14%)
Query: 29 GKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ LHA L L F+ MYS A ++F MP RN +W +S
Sbjct: 39 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 98
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITF--------------------------------- 114
+A+ AF +RR G P + +
Sbjct: 99 QNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQR 158
Query: 115 ---------------CAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGK 158
+ L +C L+ GR LH LV SG + + N L+ Y
Sbjct: 159 LWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 218
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
C ++ A +F + +N VSW +++ QN + F RR GV P F +SS
Sbjct: 219 CADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSA 278
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
A A + RS A A + +FV S L DMY KCG + +A F++MP+++
Sbjct: 279 ARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDA 337
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM--K 336
V W A+I GYA G + A+ SF +M +V VLSA +G ++ G K
Sbjct: 338 VAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV-FCSVLSA---SGGLKDGWLSK 393
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ K G + ++D+ ++ V+ A ++K P
Sbjct: 394 SIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 435
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 136/383 (35%), Gaps = 81/383 (21%)
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFD 170
+ + L +C L+ GR LH LV SG + + N L+ Y C ++ A +F
Sbjct: 21 VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM---------------- 214
+ +N VSW +++ QN + F RR GV P +
Sbjct: 81 AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLA 140
Query: 215 --------------------------------ISSVLSACARIAGLELGRSVHA-VAVKA 241
++S+L +C R L GR +HA + +
Sbjct: 141 ASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ F+ + L+ MY C + A F MP RN V W ++ G + M +
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQN---LMHADAL 257
Query: 302 EEMTSMRCEAVP-------------NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+MR V + +C+ + +V ++F + L
Sbjct: 258 AAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNL----- 312
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
D+ + GL+ A + +MP + ++ W A+++ G E ++ +
Sbjct: 313 ---------ADMYSKCGLLSEACRVFDQMPQKDAVA-WTAMIDGYAKNGSLEAAVLSFRD 362
Query: 409 LFKLDPNDSGNHVLLSNMFAATG 431
+ + + HV S + A+ G
Sbjct: 363 MKREGLVGADQHVFCSVLSASGG 385
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 342/586 (58%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ T+ + KA + +G++ A+ G DVFVG + ++Y+K G
Sbjct: 96 MASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGK 155
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A ++FD+M R+L W I+ G+ + A+D + + + E D + + A
Sbjct: 156 MDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQA 215
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++G +HG+++R +V V LVD Y K + LA VF ++ KN +SW
Sbjct: 216 CTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISW 275
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + QN N Q+ + + G +P + SVL AC+++ L+LG+SVH V+
Sbjct: 276 SALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR 335
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +A++DMY KCGS+ A F+++ R+ + WNAII Y G + ALS
Sbjct: 336 R-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSL 394
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P++ T +LSA S +G VEKG F M +Y I+P +HYAC+VDL
Sbjct: 395 FLQMRETNVK--PDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDL 452
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAG V+ A E+I+ M P I++W ALL+ C +GK +G +AA + +L+P+D G +
Sbjct: 453 LSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIY 512
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
L+SN FA RW+E VRK MK G+KK G S + V ++H F +D SH + EI
Sbjct: 513 SLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIM 572
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+L KL EMKA GY+P T F L+++EEE K + +HSE++A+AFGL+ PG + IT
Sbjct: 573 QVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLIT 632
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A KFIS IV RE++VRD RFH F DG CSC DYW
Sbjct: 633 KNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 180/378 (47%), Gaps = 15/378 (3%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
T ++HAL + +G Y++ G + A ++FD+ P+ + WNA I
Sbjct: 22 TIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYS 81
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A+ + + G PD T+ L AC+ L+ G + V G+ +V
Sbjct: 82 RRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVF 141
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V +++ Y KC ++ A VFD + ++ V W +M+ QN + ++ ++
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
VE ++ ++ AC + ++G S+H ++ + ++ V ++LVDMY K G ++ A
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELAS 261
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M +N++ W+A+I G+A G A AL +M S + P+ V+LV VL ACS+
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYK--PDSVSLVSVLLACSQ 319
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYAC-----VVDLLGRAGLVDRAYEIIKEMPMRPT 382
G ++ G + +G H+ C V+D+ + G + A + ++ R +
Sbjct: 320 VGFLKLGKSV-------HGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDS 372
Query: 383 ISVWGALLNACRVYGKPE 400
IS W A++ + ++G E
Sbjct: 373 IS-WNAIIASYGIHGSGE 389
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 329/556 (59%), Gaps = 3/556 (0%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +KS D F+G MY K G +DA ++FDEMP R+L +WN+ +S G
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220
Query: 92 PKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
++AF +R +G +P+ +T + ++AC+ L G+ LHG +V+ G G V N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ YGK + A +F+ + ++ VSW SM+V++ N E G +F +R G+ P
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++L AC S+HA + +I + +AL+++Y K G + +E F
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++ +R+ + W A++ GYA A+ F+ M E ++VT +LSACS +G
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV--DHVTFTHLLSACSHSGL 458
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G K F M+ Y ++P +HY+C+VDLLGR+G ++ AYE+IK MPM P+ VWGALL
Sbjct: 459 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 518
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACRVYG ELG+ A+ L LDP+D N+++LSN+++A G W A VR MK+ + +
Sbjct: 519 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTR 578
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS+I N+IH F D H R+ EI L +L ++ AG P T F L+D++EE
Sbjct: 579 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEV 638
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K+ + HSEK+A+AFGL+ GVP+ ITKNLRICGDCHS KF S + R +I+RD+
Sbjct: 639 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 698
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 699 RFHHFADGLCSCRDYW 714
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+ T + A + + GK LH + +K G V S +MY K G D A ++
Sbjct: 239 PNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 298
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP R+L +WN+ + G + +D F ++R G PD T A L AC+D L
Sbjct: 299 FEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG 358
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ +H ++ R GF+ ++ + L++ Y K + ++ +F+ I D++ ++W +ML Y
Sbjct: 359 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGY 418
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGN 246
+ ++F +EGVE + +LSAC+ +E G+ + + VE
Sbjct: 419 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 478
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ S +VD+ G+ G ++DA MP E + W A++G G+ ++ E++
Sbjct: 479 LDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL 538
Query: 306 SMRCEAVPNYVTLVCVLSA 324
S+ NY+ L + SA
Sbjct: 539 SLDPSDHRNYIMLSNIYSA 557
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 161/333 (48%), Gaps = 14/333 (4%)
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A S C+ + +H +++S + + + LV Y K A+ +FD + +++ VS
Sbjct: 148 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVS 207
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W S++ F R E G +P + + SV+SACA + L+ G+S+H V
Sbjct: 208 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVV 267
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK + G V ++L++MYGK G + A F +MP R+LV WN+++ + H G+A+ +
Sbjct: 268 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGM 327
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M R P+ T+V +L AC+ G + I ++ + G ++
Sbjct: 328 DLFNLMK--RAGINPDQATMVALLRACTDTGLGRQAESI-HAYIHRCGFNADIIIATALL 384
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-- 416
+L + G ++ + +I +E+ R TI+ W A+L V+ GR A LF L +
Sbjct: 385 NLYAKLGRLNASEDIFEEIKDRDTIA-WTAMLAGYAVHA---CGR-EAIKLFDLMVKEGV 439
Query: 417 SGNHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
+HV +++ +A +G EE + M +V
Sbjct: 440 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 472
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 108/181 (59%), Gaps = 7/181 (3%)
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
D ++ S++ A + + ++HA +K+ + F+G LV MY K G +DA+ F+
Sbjct: 139 DSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFD 198
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA--VPNYVTLVCVLSACSRAG 329
+MP R+LV WN+++ G + +G+ L++F MR E+ PN VTL+ V+SAC+ G
Sbjct: 199 EMPNRDLVSWNSLMSGLSGRGYLGACLNAF---CRMRTESGRQPNEVTLLSVVSACAXMG 255
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+++G K + + +K G+ A+ ++++ G+ G +D A ++ +EMP+R +S W ++
Sbjct: 256 ALDEG-KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSM 313
Query: 390 L 390
+
Sbjct: 314 V 314
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R I+P+ T L +A + + + +HA + G D+ + + ++Y+K G
Sbjct: 333 MKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGR 392
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++ +F+E+ +R+ W A ++ + + AI F + + G E D +TF L+A
Sbjct: 393 LNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 452
Query: 121 CSDCSLLQLGRQ 132
CS L++ G++
Sbjct: 453 CSHSGLVEEGKK 464
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 347/587 (59%), Gaps = 8/587 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + + T + + + G +H LK G DVFV + +MYSK G
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD+M R+L +WN+ I+ P A+ F ++ G PDL+T + +
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
S S ++ R + GF++R + D +V + N LV+ Y K + A VFD + K+ +S
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392
Query: 180 WCSMLVVYVQN---YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
W +++ Y QN E + M R P S++ A + + L+ G +HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECR--DTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + ++FV + L+D+YGKCG ++DA F ++P V WNAII G +
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F++M + R +A +++T V +LSACS +G V++G K F M +YGIKP +HY C
Sbjct: 511 ALQLFKDMLAERVKA--DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG +++AYE+++ MP++P S+WGALL+AC++YG ELG +A+D L ++D +
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G +VLLSN++A T +WE VR +D G++K G S + V ++ +F + +H +
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY 688
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
TEI L L +MK+ GY+PD +F D+EE+EK + HSE++A+AFG+I+ PP P
Sbjct: 689 TEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
IRI KNLR+CGDCH+A K+IS I RE++VRD+NRFH F DG CSC+
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 238/462 (51%), Gaps = 26/462 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFP + KA +L V GK++H K G DVFV S +YS+ G+ D A
Sbjct: 120 LRPDFYTFPPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F +MP +++ +WNA IS G A+ ++ G + D IT + L C+
Sbjct: 177 KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G +H +++ G D +V V N L++ Y K + A++VFD + ++ VSW S++
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVE 244
Y QN + + F + G+ P + S+ S ++++ + RS+ + + ++
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLD 356
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ +G+ALV+MY K G + A F+++P ++ + WN ++ GY G A A+ ++ M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
R + +PN T V ++ A S GA+++GMKI ++ +K + C++DL G+
Sbjct: 417 EECR-DTIPNQGTWVSIIPAYSHVGALQQGMKI-HAKLIKNSLYLDVFVATCLIDLYGKC 474
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVL 422
G ++ A + E+P R T W A++ + ++G+ E A LFK L +H+
Sbjct: 475 GRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGE----EALQLFKDMLAERVKADHIT 529
Query: 423 LSNMFAA---TGRWEEA----DLVRKEMKDVGIK---KGAGC 454
++ +A +G +E D+++KE GIK K GC
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEY---GIKPSLKHYGC 568
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 17/388 (4%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
D F LF +S +++ T K+LHAL L G+ ++ + ++Y G + FD
Sbjct: 22 DADFNALF--NSCVNVNAT-KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG----EPDLITFCAFLNACSDCS 125
+ ++N+ +WN+ IS V G+ A++ L G PD TF L AC S
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VS 136
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+++H + + GF+ +V V LV Y + + +A VF + K+ SW +M+
Sbjct: 137 LVD-GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ QN + + EGV+ ++S+L CA+ + G +H +K ++
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDS 255
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV +AL++MY K G +QDA++ F++M R+LV WN+II Y AL F+ M
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 306 --SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+R P+ +T+V + S S+ I + + + +V++ +
Sbjct: 316 LGGIR----PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLN 391
G ++ A+ + ++P + TIS W L+
Sbjct: 372 LGYMNCAHTVFDQLPRKDTIS-WNTLVT 398
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F A N+C + + ++LH L+ G N+ + L++ Y ++ L++ FD I
Sbjct: 25 FNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 174 DKNDVSWCSMLVVYVQ--NYEEENGC--QMFLTARREGVEPKDFMISSVLSACARIAGLE 229
KN SW S++ YV+ Y E C Q+F + P + +L AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G+ VH K E ++FV ++LV +Y + G + A F MP +++ WNA+I G+
Sbjct: 140 -GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 290 HQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
G+A AL + M+ E V + +T+ +L C+++ V G+ I + LK+G+
Sbjct: 199 QNGNAAGALGV---LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLI-HLHVLKHGLD 254
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL----------NACRVYGK 398
++++ + G + A + +M +R +S W +++ A R +
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS-WNSIIAAYEQNNDPSTALRFFKG 313
Query: 399 PELGRIAADNL 409
+LG I D L
Sbjct: 314 MQLGGIRPDLL 324
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/559 (40%), Positives = 327/559 (58%), Gaps = 4/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K H ++ DV + + YSK G + A ++FD M ER+L +WN I
Sbjct: 82 AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQLGRQLHGFLVRSGFDGNVS 147
A+D F +R G + T + L+AC ++C L+ ++LH +++ D N+
Sbjct: 142 NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC-KKLHCLSMKTSLDLNLY 200
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+D Y KC + A VF+ + DK+ V+W SM+ YVQ+ E ++ A+R
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMS 260
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+E F +SSV+ AC+ +A L G+ +HAV K+ N+FV S+ VDMY KCGS++++
Sbjct: 261 LEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESY 320
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
I F+++ E+N+ WN II G+A + FE+M PN VT +LS C
Sbjct: 321 IIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMH--PNEVTFSSLLSVCGH 378
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G VE+G + F M YG+ P HY+C+VD+LGRAGL+ AYE+IK +P PT S+WG
Sbjct: 379 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWG 438
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL +CRV EL +AA LF+L+P ++GNHVLLSN++AA +WEE RK ++D
Sbjct: 439 SLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCD 498
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK G SWI +K+++HIF+ ++SH R EI ML L E++ GY P L+DVE
Sbjct: 499 VKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVE 558
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+K + HSEK+AL FGL+ +P G +RI KNLRIC DCH K S R +IVR
Sbjct: 559 IGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVR 618
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F DG+CSC ++W
Sbjct: 619 DANRFHHFSDGHCSCGEFW 637
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 172/334 (51%), Gaps = 9/334 (2%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F L C+ + + HG +R G+V++ N L++ Y KC V LA+ VFDG++
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-ARIAGLELGR 232
+++ VSW +M+ +Y +N E +F R EG + +F ISSVLSAC A LE +
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC-K 184
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H +++K ++ N++VG+AL+D+Y KCG I DA F M +++ V W++++ GY
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSK 244
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ + AL + M E N TL V+ ACS A+ +G K +++ K G
Sbjct: 245 NYEEALLLYRRAQRMSLE--QNQFTLSSVICACSNLAALIEG-KQMHAVIRKSGFGSNVF 301
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK- 411
+ VD+ + G + +Y I E+ + I +W +++ + +P+ I + + +
Sbjct: 302 VASSAVDMYAKCGSLRESYIIFSEVQEK-NIELWNTIISGFAKHARPKEVMILFEKMQQD 360
Query: 412 -LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ PN+ LLS + TG EE K M+
Sbjct: 361 GMHPNEVTFSSLLS-VCGHTGLVEEGRRFFKLMR 393
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E ++FT + A A + K+LH L++K+ +++VG + D+Y+K G+
Sbjct: 155 MRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGM 214
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F+ M +++ TW++ ++ V + A+ + +R E + T + + A
Sbjct: 215 INDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 274
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ + L G+Q+H + +SGF NV V + VD Y KC + + ++F + +KN W
Sbjct: 275 CSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELW 334
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA-V 239
+++ + ++ + +F +++G+ P + SS+LS C +E GR +
Sbjct: 335 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 394
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ N+ S +VD+ G+ G + +A +P E W +++ + ++A
Sbjct: 395 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAE 454
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ +++ + E N+V L + +A + + K K+
Sbjct: 455 VAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 494
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/616 (38%), Positives = 341/616 (55%), Gaps = 39/616 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---- 63
PN ++FP L K+ + G+Q+HA LK G D +V S MY++ G +D
Sbjct: 62 PNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV 121
Query: 64 ---------------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
A K+FDE+ ER++ +WNA I+ V GR + A+
Sbjct: 122 FDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEAL 181
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS----GFDGNVSVCNGL 152
+ F + RT PD T + ++AC+ ++LGRQ+H ++ GF ++ + N L
Sbjct: 182 ELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNAL 241
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+D Y KC +V A +F+G+ K+ VSW +++ Y + +F R G P D
Sbjct: 242 IDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPND 301
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ SVL ACA + +++GR +H K V + ++L+DMY KCG I+ A F
Sbjct: 302 VTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF 361
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N M R+L WNA+I G+A G A+ A F M R E P+ +T V +LSACS +G
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVE--PDDITFVGLLSACSHSGL 419
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ G +IF SMT Y + P EHY C++DLLG +GL A E+I MPM P +W +LL
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
AC+ +G EL A L K++P +SG++VLLSN++A GRWE+ VR + G+KK
Sbjct: 480 KACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK 539
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS I V + +H F D H R EI ML ++ +++ AG+ PDT+ L ++EEE
Sbjct: 540 VPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEW 599
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE++ RD
Sbjct: 600 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRT 659
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 660 RFHHFRDGVCSCCDYW 675
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 190/396 (47%), Gaps = 51/396 (12%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E NL WN + P +A++ ++ + G P+ +F L +C+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 124 CSLLQLGRQLHGFLVRSG---------------------------FDG----NVSVCNGL 152
+ GRQ+H +++ G FD +V C L
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+ Y + A+ VFD I +++ VSW +M+ YV+N E ++F R V P +
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 213 FMISSVLSACARIAGLELGRSVHA-VAVKACVEG---NIFVGSALVDMYGKCGSIQDAEI 268
+ SV+SACA+ +ELGR VH+ V G ++ + +AL+D+Y KCG ++ A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F + +++V WN +IGGY H AL F+EM +R PN VTL+ VL AC+
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEM--LRSGECPNDVTLLSVLPACAHL 314
Query: 329 GAVEKG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
GA++ G + ++ LK G+ ++D+ + G ++ A+++ M R ++S W
Sbjct: 315 GAIDIGRWIHVYIDKKLK-GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR-SLSSW 372
Query: 387 GALLNACRVYGKPELGRIAADNLF------KLDPND 416
A++ ++G+ AA +LF +++P+D
Sbjct: 373 NAMIFGFAMHGRAN----AAFDLFSRMRGNRVEPDD 404
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKS--GQIHDVFVGCSAFDMYSKT 58
M R PND T + A + L G+ +H K G ++ + S DMY+K
Sbjct: 292 MLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKC 351
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G + A ++F+ M R+L++WNA I + GR A D F +R EPD ITF L
Sbjct: 352 GDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLL 411
Query: 119 NACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKN 176
+ACS LL LGRQ+ + + + ++D G A+ + + ++ +
Sbjct: 412 SACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPD 471
Query: 177 DVSWCSML 184
V WCS+L
Sbjct: 472 GVIWCSLL 479
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/546 (40%), Positives = 324/546 (59%), Gaps = 43/546 (7%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+HDVF + Y + + ++A ++FD MPERN +WNA ++ V G R + A + F
Sbjct: 273 VHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF-- 330
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
D++ C NVS N ++ Y +C +
Sbjct: 331 --------DVM-------PCR----------------------NVSTWNTMITGYAQCGK 353
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ AK +FD + ++ VSW +M+ Y Q+ ++F+ REG SS LS
Sbjct: 354 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALST 413
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA + LELG+ +H VK E FVG+AL+ MY KCGSI++A F +M +++V W
Sbjct: 414 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 473
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYS 340
N +I GY+ G + AL FE SM+ E + P+ T+V VLSACS G V+KG + F++
Sbjct: 474 NTMIAGYSRHGFGEEALRFFE---SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHT 530
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
MT YG++P ++HYAC+VDLLGRAGL++ A+ ++K MP P ++WG LL A RV+G E
Sbjct: 531 MTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 590
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
L AAD +F ++P +SG +VLLSN++A++GRW + +R M+D G+KK G SWI ++
Sbjct: 591 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 650
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
N+ H F D H EI A L L MK AGY+ T+ L+DVEEEEK V +HSE
Sbjct: 651 NKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSE 710
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
++A+A+G++ + G PIR+ KNLR+C DCH+A K+++ + GR +I+RDNNRFH F DG C
Sbjct: 711 RLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSC 770
Query: 581 SCSDYW 586
SC DYW
Sbjct: 771 SCGDYW 776
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 97/430 (22%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G + A +FDEMPER+L +WN I ++ R G +L
Sbjct: 100 YLRNGEFELARMLFDEMPERDLVSWNVMIK-------------GYVRNRNLGKARELFER 146
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ CS ++L SG+ NG VD A+ VFD + +
Sbjct: 147 MPERDVCSWNTIL------------SGY-----AQNGCVDD---------ARRVFDRMPE 180
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMF-----------------LTARREGVEPKDFMIS- 216
KNDVSW ++L YVQN + E C +F +++ VE + F S
Sbjct: 181 KNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 240
Query: 217 ---------SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++++ A+ ++ R + ++F +A+V Y + +++A
Sbjct: 241 KVRDVVSWNTIITGYAQNGEIDEARQL----FDESPVHDVFTWTAMVSGYIQNRMVEEAR 296
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++MPERN V WNA++ GY +MA F+ M C V + T++ + C
Sbjct: 297 ELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMP---CRNVSTWNTMITGYAQC-- 351
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM------RP 381
G + + +F M + + +A ++ ++G +YE ++ + R
Sbjct: 352 -GKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSG---HSYEALRLFVLMEREGGRL 402
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS---GNHVLLSNMFAATGRWEEADL 438
S + + L+ C ELG+ L K GN +LL M+ G EEA+
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEEAND 460
Query: 439 VRKEM--KDV 446
+ KEM KD+
Sbjct: 461 LFKEMAGKDI 470
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE N +F + + GKQLH +K G FVG + MY K G
Sbjct: 395 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+ +F EM +++ +WN I+ G + A+ F +++R G +PD T A L+A
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSA 514
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKC 159
CS L+ GRQ H G N +VD G+
Sbjct: 515 CSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRA 554
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+A++ Y + G + A + F++MPER+LV WN +I GY + A FE M
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER--- 150
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ + +LS ++ G V+ ++F M K + A
Sbjct: 151 ---DVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNA 188
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/583 (40%), Positives = 337/583 (57%), Gaps = 40/583 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFP + KA L V G+++H A K G +VFV S MYS+ G A
Sbjct: 114 IRPDFYTFPPVLKACGTL---VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 170
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R++ +WNA IS + G A+D +R G + + +T
Sbjct: 171 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTV----------- 219
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
VS+ VD Y K + A VF+ I K+ +SW +++
Sbjct: 220 --------------------VSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 259
Query: 186 VYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN +++ + + + P S+L A A + L+ G +H +K +
Sbjct: 260 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 319
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++FV + L+D+YGKCG + DA F ++P+ + V WNAII + GHA+ L F EM
Sbjct: 320 LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM 379
Query: 305 TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
E V P++VT V +LSACS +G VE+G F M +YGIKP +HY C+VDLLGR
Sbjct: 380 LD---EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGR 435
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG ++ AY+ IK+MP++P S+WGALL ACR++G ELG+ A+D LF++D + G +VLL
Sbjct: 436 AGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLL 495
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++A G+WE D VR ++ G+KK G S I V ++ +F + SH + EI L
Sbjct: 496 SNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEEL 555
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
L +MK+ GYIPD +F L DVEE+EK + HSE++A+AFG+I+ PP PIRI KNL
Sbjct: 556 RVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNL 615
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+A KFIS I RE++VRD+NRFH F DG CSC DYW
Sbjct: 616 RVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 203/454 (44%), Gaps = 55/454 (12%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
DF F LF +S+ K LHAL + +G++ +F+ ++Y+ G + FD
Sbjct: 21 DFNF--LFDSSTKTPF---AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 75
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQ 128
++P++++ WN+ IS V G AI F L PD TF L AC L
Sbjct: 76 QIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LV 132
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GR++H + + GF NV V L+ Y + G+A+ +FD + ++ SW +M+ +
Sbjct: 133 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 192
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN + R EG++ + S+L
Sbjct: 193 QNGNAAQALDVLDEMRLEGIKMNFVTVVSIL----------------------------- 223
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
VDMY K G + A F +P ++++ WN +I GYA G A A+ ++ M +
Sbjct: 224 --PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 281
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E +PN T V +L A + GA+++GMKI + +K + C++D+ G+ G +
Sbjct: 282 -EIIPNQGTWVSILPAYAHVGALQQGMKI-HGRVIKTNLHLDVFVATCLIDVYGKCGRLV 339
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF--KLDPNDSGNHVLLSNM 426
A + ++P +++ W A+++ ++G E LF LD +HV ++
Sbjct: 340 DAMSLFYQVPQESSVT-WNAIISCHGIHGHAE----KTLKLFGEMLDEGVKPDHVTFVSL 394
Query: 427 FAA---TGRWEEADLVRKEMKDVGIK---KGAGC 454
+A +G EE + M++ GIK K GC
Sbjct: 395 LSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 428
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/578 (40%), Positives = 328/578 (56%), Gaps = 2/578 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ T C K+ S + G+ + A A+K G + D FV S MY+ G A +F
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D E + WNA ++ + G ++ F + G D +T + + AC +
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LG+ + G + G N + L+D Y KC E+G A+ +FDG+ ++ V+W +M+ Y
Sbjct: 239 LGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYT 298
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
Q + +F + VEP D + SVLSACA + LE G+ VH+ + +
Sbjct: 299 QADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI 358
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+G+ALVD Y KCG I DA AF MP +N W A+I G A G AL F M
Sbjct: 359 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAG 418
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E P VT + VL ACS + VE+G + F SM YGIKP EHY C+VDLLGRAGLVD
Sbjct: 419 IE--PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVD 476
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
AY+ I+ MP+ P +W ALL++C V+ +G A + L+P+ SG++VLLSN++A
Sbjct: 477 EAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYA 536
Query: 429 ATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLRE 488
+ G+W++A +VRKEMKD GI+K GCS I + + F A+D+ H EI + ++
Sbjct: 537 SAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIG 596
Query: 489 EMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGD 548
+K AGY+P+T +VEE EK V HHSEK+A+AFGL+ + PG IR++KNLR+C D
Sbjct: 597 RIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCAD 656
Query: 549 CHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CHSA K IS + RE++VRD N FH F DG CSC+DYW
Sbjct: 657 CHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 178/384 (46%), Gaps = 20/384 (5%)
Query: 26 PVTGKQLHALALKSGQI-------HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT 78
P QLHA +KSG++ H + +A L A +F P L+T
Sbjct: 29 PSYLPQLHAALIKSGELTGSAKSFHSLLEAAAA-----SPTLLPYAVSLFRLGPRPPLST 83
Query: 79 --WNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQLGRQLH 134
+N + + G P++A+ FI + D T L +CS L +GR +
Sbjct: 84 PCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQ 143
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
+ V+ G + V + L+ Y C +V A++VFD + V W +++ Y++N +
Sbjct: 144 AYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWM 203
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+MF GV + + SV++AC RI +LG+ V + + N + +AL+
Sbjct: 204 EVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALM 263
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG I A F+ M R++V W+A+I GY AL F EM R E PN
Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVE--PN 321
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
VT+V VLSAC+ GA+E G K +S + + +VD + G +D A E
Sbjct: 322 DVTMVSVLSACAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAF 380
Query: 375 KEMPMRPTISVWGALLNACRVYGK 398
+ MP++ + + W AL+ G+
Sbjct: 381 ESMPVKNSWT-WTALIKGMATNGR 403
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PND T + A + L TGK +H+ + +G + D Y+K G
Sbjct: 313 MQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGC 372
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA + F+ MP +N TW A I GR + A++ F ++R G EP +TF L A
Sbjct: 373 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ GR+ + R G V +VD G+ V A + + I+ N V
Sbjct: 433 CSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492
Query: 179 SWCSML 184
W ++L
Sbjct: 493 IWRALL 498
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 341/580 (58%), Gaps = 5/580 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD-VFVGCSAFDMYSKTGLKDDADKM 67
N TF A S + K +HAL + +G HD + VG + MY K G+ +A K+
Sbjct: 1148 NHVTFASALAACSNPECLIESKIVHALIIVAG-FHDFLIVGNALVTMYGKLGMMMEAKKV 1206
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-L 126
MP+ + TWNA I P A+ A+ +R G + IT + L ACS L
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+ G +H +V +GF+ + V N L+ Y KC ++ + +FDG+ +K+ ++W +M+
Sbjct: 1267 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 1326
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ E ++F R GV F S L+A A +A LE G+ +H + +K E +
Sbjct: 1327 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 1386
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ V +A +DMYGKCG + D + R+ + WN +I +A G A +F EM
Sbjct: 1387 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEM-- 1444
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
++ P++VT V +LSAC+ G V++G+ + SMT ++G+ PG EH C++DLLGR+G
Sbjct: 1445 LKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGR 1504
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A IKEMP+ P W +LL ACR++G EL R A++L +LDP+D +VL SN+
Sbjct: 1505 LSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNV 1564
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
A +G+WE+ + +RKEM IKK CSW+ +K+++H F + H + + I A L +L
Sbjct: 1565 CATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGEL 1624
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+ K AGY+PDT+FAL+D++EE+K + +HSE++ALAFGLI P +RI KNLR+C
Sbjct: 1625 MKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVC 1684
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCHS +KF+SGIVGR++++RD RFH F G CSC DYW
Sbjct: 1685 GDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 266/481 (55%), Gaps = 4/481 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + N FT+ +A ++L G Q+ K + ++FV + D +SK G
Sbjct: 122 MRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGK 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F M ER++ +WNA I + G ++ F ++ R G PD T + L A
Sbjct: 182 MEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 241
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ L + Q+HG + + G+ V L++ Y K + AK + G++ K+ S
Sbjct: 242 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 301
Query: 181 CSMLVVYV-QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+++ Y + + +F + + D ++ S+L+ CA +A LG +HA A+
Sbjct: 302 TALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFAL 361
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++ +G+AL+DMY K G I+DA+ AF++M E+N++ W ++I GYA G+ MA+S
Sbjct: 362 KYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVS 421
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+++M S + PN VT + +L ACS G +G + F +M KY IKP AEHY+C+VD
Sbjct: 422 LYKKMESKGFK--PNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVD 479
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
L R GL++ AY ++ ++ ++ S+WGA+L A +YG LG+ AA NLF + P +S N
Sbjct: 480 LFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVN 539
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI-SVKNRIHIFQAKDTSHERNTE 478
+V+L+++++A G W++A +RK M++ KK AG S+ + K I + Q + R+
Sbjct: 540 YVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQVQHGVSRRDFN 599
Query: 479 I 479
I
Sbjct: 600 I 600
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
+ PN F L A S + ++ G Q+H +K+G + DV+VG + Y GL +A
Sbjct: 841 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 900
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+F+EMP+ N+ +W + + G P ++ + +R+ G + TF ++C
Sbjct: 901 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LG Q+ G +++ GF+ +VSV N L+ + + V A VFD + + + +SW +M+
Sbjct: 961 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 1020
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y + + F R E +SS+LS C+ + L+ GR +H + VK ++
Sbjct: 1021 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
N+ + + L+ +Y + G +DAE+ F M ER+L+ WN+++ Y G L E+
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 1140
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M V N+VT L+ACS + + KI +++ + G +V + G+
Sbjct: 1141 LQMG--KVMNHVTFASALAACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKL 1197
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G++ A ++++ MP +P W AL+
Sbjct: 1198 GMMMEAKKVLQTMP-QPDRVTWNALI 1222
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 199/399 (49%), Gaps = 7/399 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E +S N TF + + L V G Q+ ++ G V V S M+S
Sbjct: 938 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 997
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +FD M E ++ +WNA IS G + ++ F +R E + T + L+
Sbjct: 998 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 1057
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ GR +HG +V+ G D NV +CN L+ Y + A++VF + +++ +SW
Sbjct: 1058 CSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 1117
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ + +G ++ + G +S L+AC+ L + VHA+ +
Sbjct: 1118 NSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIV 1177
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + VG+ALV MYGK G + +A+ MP+ + V WNA+IGG+A + A+ +
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 1237
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEK-GMKIFYSMTLKYGIKPGAEHYACVV 358
++ +R + +P NY+T+V VL ACS + K GM I + L G + ++
Sbjct: 1238 YK---LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLI 1293
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G ++ + I + + I+ W A++ A +G
Sbjct: 1294 TMYAKCGDLNSSNYIFDGLGNKSPIT-WNAMVAANAHHG 1331
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 18/409 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H + +G D+ + Y K G A +FD MPER++ +W A +S
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + A F ++R G + + T+ + L AC+ L +G Q+ G + + F N+ V
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 168
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY-VQNYEEENGCQMFLTARREG 207
+ LVDF+ KC ++ A +F +++++ VSW +M+ Y VQ + +++ C MF + R G
Sbjct: 169 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFC-MFRSMLRGG 227
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + SVL A A GL + +H + + V L++ Y K GS++ A+
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 287
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQG-HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
M +++L A+I GYAH+G ++ AL F+EM M + V L +L+ C+
Sbjct: 288 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM--DDVILCSMLNICA 345
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+ G +I ++ LKY ++D+ ++G ++ A EM + IS W
Sbjct: 346 NLASFALGTQI-HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS-W 403
Query: 387 GALLNACRVYGKPELGRIAADNLFKLD-----PNDSGNHVLLSNMFAAT 430
+L++ Y K G +A K++ PND LS +FA +
Sbjct: 404 TSLISG---YAKHGYGHMAVSLYKKMESKGFKPNDV---TFLSLLFACS 446
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 186/388 (47%), Gaps = 8/388 (2%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N FP K S + + GK LHA + +F + +MYSK G + A +F
Sbjct: 745 NAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 802
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL- 127
DEM RN A+W+ +S V G + A+ F + G EP+ + + ACS +
Sbjct: 803 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 862
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G Q+HGF+V++G G+V V LV FYG V A+ +F+ + D N VSW S++V Y
Sbjct: 863 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY 922
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ ++ R+EGV ++V S+C + LG V ++ E ++
Sbjct: 923 SDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 982
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++L+ M+ S+++A F+ M E +++ WNA+I YAH G +L F M +
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E N TL +LS CS ++ G I + + +K G+ ++ L AG
Sbjct: 1043 HNET--NSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKLGLDSNVCICNTLLTLYSEAGRS 1099
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRV 395
+ A + + M R IS W +++ AC V
Sbjct: 1100 EDAELVFQAMTERDLIS-WNSMM-ACYV 1125
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+P L + L C D + G +H L+ +GF ++ + L+ FY K +V A+
Sbjct: 29 DPSL--YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VFDG+ +++ VSW +M+ Y QN E +F R GV+ F S L AC +
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L++G V K N+FV SALVD + KCG ++DA F M ER++V WNA+IGG
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 206
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
YA QG AD + F M +R VP+ TL VL A + G +
Sbjct: 207 YAVQGFADDSFCMFRSM--LRGGLVPDCYTLGSVLRASAEGGGL 248
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 15/286 (5%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L S+ + G+ LH F + + + N L++ Y K + A+ VFD + +N+
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 178 VSWCSMLVVYVQN--YEEENG--CQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGR 232
SW +ML YV+ YEE G CQM+ GVEP FM++S+++AC+R + + G
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGL----GVEPNGFMVASLITACSRSGYMADEGF 866
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH VK + G+++VG+ALV YG G + +A+ F +MP+ N+V W +++ GY+ G
Sbjct: 867 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926
Query: 293 HADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ L+ ++ MR E V N T V S+C G ++ ++YG +
Sbjct: 927 NPGEVLNVYQR---MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL-GHIIQYGFEDSV 982
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ + V+ A + M IS W A+++A +G
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMNECDIIS-WNAMISAYAHHG 1027
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++ + F+F A++ L + G+QLH L +K G D+ V +A DMY K G
Sbjct: 1343 MRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGE 1402
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D KM + R+ +WN IS G + A + F + + G +PD +TF + L+A
Sbjct: 1403 MHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSA 1462
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK-VVFDGIIDKNDV 178
C+ L+ G + + R G + C ++D G+ + A+ + + + ND+
Sbjct: 1463 CNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDL 1522
Query: 179 SWCSML 184
+W S+L
Sbjct: 1523 AWRSLL 1528
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/586 (38%), Positives = 332/586 (56%), Gaps = 37/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + N FTFP + A +++ G+Q+H + SG +V+V + DMY+K G
Sbjct: 227 MRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGD 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + D M ++ WN+ I V G + A+ F + D T+ + L +
Sbjct: 287 LASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKS 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ C L++G +H +++GFD +V N LVD Y K + A VF+ I+DK+ +SW
Sbjct: 347 LASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YV N E Q+F R V+ F+++ V SACA + +E GR VHA +K
Sbjct: 407 TSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIK 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++L+ MY KCG ++DA F+ M RN++ W AII GYA G
Sbjct: 467 SSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG-------- 518
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
VE G F SM YGIKP ++HYAC++DL
Sbjct: 519 -----------------------------LVETGQSYFESMEKVYGIKPASDHYACMIDL 549
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A ++ M + P ++W +LL+ACRV+G ELG A NL KL+P++S +
Sbjct: 550 LGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPY 609
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNMF+ GRWE+A +R+ MK +GI K G SWI +K+++H F ++D SH EI
Sbjct: 610 VLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIY 669
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ + ++ +K AG++PD NFAL D++EE K + +HSEK+A+AFGL+ + G PIRI
Sbjct: 670 SKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIF 729
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA K+IS I R +I+RD N FH F +G CSC D+W
Sbjct: 730 KNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 9/440 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T + +A S L + TGK +H A+K ++FV DMYSK +A+ +
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 68 FDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +P+R N W A ++ G AI F +R G E + TF + L AC+ S
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISA 251
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
GRQ+HG ++ SGF NV V + LVD Y KC ++ A+++ D + + V W SM+V
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
V + E +F + DF SVL + A L++G SVH++ +K +
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDAC 371
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V +ALVDMY K G++ A FNK+ +++++ W +++ GY H G + AL F +M +
Sbjct: 372 KTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRT 431
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R + + + CV SAC+ +E G ++ ++ +K ++ + + G
Sbjct: 432 ARVDL--DQFVVACVFSACAELTVIEFGRQV-HANFIKSSAGSLLSAENSLITMYAKCGC 488
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI---AADNLFKLDPNDSGNHVLL 423
++ A + M R IS W A++ G E G+ + + ++ + P S ++ +
Sbjct: 489 LEDAIRVFDSMETRNVIS-WTAIIVGYAQNGLVETGQSYFESMEKVYGIKP-ASDHYACM 546
Query: 424 SNMFAATGRWEEADLVRKEM 443
++ G+ EA+ + M
Sbjct: 547 IDLLGRAGKINEAEHLLNRM 566
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 172/343 (50%), Gaps = 15/343 (4%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ G +A K+F+E P +N TW++ +S G + F + G +P T
Sbjct: 78 YANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTL 137
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L ACS SLL G+ +H + ++ + N+ V GLVD Y KC + A+ +F + D
Sbjct: 138 GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD 197
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
KN V W +ML Y QN E Q F R +G+E F S+L+AC I+ GR
Sbjct: 198 RKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQ 257
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + N++V SALVDMY KCG + A + + M ++VCWN++I G G+
Sbjct: 258 VHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGY 317
Query: 294 ADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIK 348
+ AL F +M + +R + Y +++ L++C K +KI +S+T+K G
Sbjct: 318 MEEALVLFHKMHNRDIRIDDF-TYPSVLKSLASC-------KNLKIGESVHSLTIKTGFD 369
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+VD+ + G + A ++ ++ + IS W +L+
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVIS-WTSLVT 411
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 5/252 (1%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ Y + A+ +F+ KN ++W S++ Y +N E G + F +G +
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + + SVL AC+ ++ L G+ +H A+K +E NIFV + LVDMY KC + +AE
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 270 FNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F +P+R N V W A++ GYA G + A+ F+EM + E+ N+ T +L+AC+
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMES--NHFTFPSILTACTSI 249
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A G ++ + + G P + +VD+ + G + A I+ M + + W +
Sbjct: 250 SAYAFGRQV-HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVV-CWNS 307
Query: 389 LLNACRVYGKPE 400
++ C +G E
Sbjct: 308 MIVGCVTHGYME 319
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ + ++ Y G++ +A FN+ P +N + W++++ GY G L F +M S
Sbjct: 69 YTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+ TL VL ACS + G K+ + +K ++ +VD+ + +
Sbjct: 129 GQK--PSQYTLGSVLRACSTLSLLHTG-KMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185
Query: 368 DRAYEIIKEMPMRPTISVWGALLN 391
A + +P R W A+L
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLT 209
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ K G + +A F++MP R+ WN +I YA+ G+ A F E +
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNET------PI 96
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP-----GAEHYACVVDLLGRAGLV 367
N +T ++S + G +G++ F M G KP G+ AC L G +
Sbjct: 97 KNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKPSQYTLGSVLRACSTLSLLHTGKM 155
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM- 426
Y I ++ + I V L++ +Y K + + A+ LF P D N+V + M
Sbjct: 156 IHCYAI--KIQLEANIFVATGLVD---MYSKCKC-LLEAEYLFFSLP-DRKNYVQWTAML 208
Query: 427 --FAATGRWEEADLVRKEMKDVGIK 449
+A G +A KEM++ G++
Sbjct: 209 TGYAQNGESLKAIQCFKEMRNQGME 233
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/587 (39%), Positives = 335/587 (57%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P+ T L +A + GK +H L G +D+ V S DMYSK G
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F +MP RNL +WNA IS V G + D F L R+ G DL T + L
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L G+ LHG +RS F+ N+ + +VD Y KC + A VF+ + D+N ++W
Sbjct: 342 CSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITW 400
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+MLV QN E+ ++F + EG+ S++ +CA + L+ GRS+H +
Sbjct: 401 TAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR 460
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+I +ALVDMY KCG I AE F+ +++V WN++I GY GH A+
Sbjct: 461 LGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVG 520
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+ +M + PN T + +LSACS + VE+G+ +F SM + I+P +HYAC+VD
Sbjct: 521 IYHKMIEEGLK--PNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVD 578
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LL RAG + A +I++MP +P +V ALL+ CR + LG +D L LD + G
Sbjct: 579 LLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGI 638
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+++LSN++A RW++ D +R M++ G+KK G S + N +H F A D SH EI
Sbjct: 639 YIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEI 698
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L LR ++ +GY+PDT+ L DV+EE K+ + HSE++A+AFGL+ P G IRI
Sbjct: 699 YHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRI 758
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
TKNLR+CGDCH+ K+IS IV RE+IVRD NRFH F +G CSC DYW
Sbjct: 759 TKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 185/369 (50%), Gaps = 4/369 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G ++ + A++ G + FVG S K G +A ++FD MP +++ WN+ I V
Sbjct: 149 GMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQ 208
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A F + +G +P IT + + AC L+LG+ +HG+++ G ++ V
Sbjct: 209 AGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILV 268
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
VD Y K ++ A+ VF + +N VSW +M+ V+N +F R
Sbjct: 269 LTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSG 328
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
I S+L C++ A L G+ +H A+++ E N+ + +A+VD+Y KCGS++ A
Sbjct: 329 GFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATF 387
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN+M +RN++ W A++ G A GHA+ AL F +M A N VT V ++ +C+
Sbjct: 388 VFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAA--NSVTFVSLVHSCAHL 445
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G++++G I + + G + +VD+ + G ++ A I + + +W +
Sbjct: 446 GSLKRGRSI-HGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNS 504
Query: 389 LLNACRVYG 397
++ ++G
Sbjct: 505 MITGYGMHG 513
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 17/407 (4%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L + SS I V K HA + + D FV YS + A +FD+
Sbjct: 34 FLSLLRESSKNLIWV--KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFF 91
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+ NA + + GR + ++ F +R E D + L AC+ ++G +
Sbjct: 92 QPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGME 151
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+ V G + N V + ++ F K ++G A+ VFDG+ +K+ V W S++ YVQ
Sbjct: 152 IISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGC 211
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ Q+F G++P ++S++ AC I L+LG+ +H + + +I V ++
Sbjct: 212 FDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS 271
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
VDMY K G I+ A F KMP RNLV WNA+I G G + F + +R
Sbjct: 272 FVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRL--VRSSGG 329
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
+ T+V +L CS+ ++ G KI + ++ + +VDL + G + +A
Sbjct: 330 FDLTTIVSLLQGCSQTASLATG-KILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATF 387
Query: 373 IIKEMPMRPTISVWGALL----------NACRVYGKPELGRIAADNL 409
+ M R I+ W A+L +A R++ + + IAA+++
Sbjct: 388 VFNRMKDRNVIT-WTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSV 433
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/628 (38%), Positives = 358/628 (57%), Gaps = 49/628 (7%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ + + A +++ GKQ+H AL+SG DVFVG + DMY+K G+ ++A+
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 66 KMFDEMPERNLATWNAYIS------------------------------NAVLGGRPK-- 93
K+F+ M +++ +WNA ++ +AV+ G +
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 94 ---NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGFDGN--- 145
A+D F +R G EP+++T + L+ C+ L G++ H ++ D N
Sbjct: 347 LGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPG 406
Query: 146 --VSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMF- 200
+ V N L+D Y KC A+ +FD I D++ V+W ++ Q+ E ++F
Sbjct: 407 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 466
Query: 201 -LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYG 258
+ V P F IS L ACAR+ L GR +HA ++ E +FV + L+DMY
Sbjct: 467 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 526
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
K G + A + F+ M +RN V W +++ GY G + AL F EM + VP+ VT
Sbjct: 527 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ--KVGLVPDGVTF 584
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V VL ACS +G V++G+ F M +G+ PGAEHYAC+VDLL RAG +D A E+I+ MP
Sbjct: 585 VVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP 644
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
M+PT +VW ALL+ACRVY ELG AA+ L +L+ + G++ LLSN++A W++
Sbjct: 645 MKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVAR 704
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+R MK+ GIKK GCSW+ + F A D SH + +I +L L + +KA GY+PD
Sbjct: 705 IRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 764
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
FAL+DV++EEK + HSEK+ALA+G++ PG PIRITKNLR CGDCHSAF +IS
Sbjct: 765 NRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISI 824
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I+ E+IVRD++RFH F +G CSC YW
Sbjct: 825 IIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 211/449 (46%), Gaps = 51/449 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R P+ +TFP + KA + G +HA+ SG +VFVG MY + G
Sbjct: 117 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGA 176
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCA 116
++A ++FDEM ER +L +WN+ ++ + GG A+ F + G PD ++
Sbjct: 177 WENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVN 236
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L AC+ G+Q+HG+ +RSG +V V N +VD Y KC + A VF+ + K+
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 296
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARRE------------------------------ 206
VSW +M+ Y Q ++ +F R E
Sbjct: 297 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 356
Query: 207 -----GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-------GNIFVGSALV 254
G EP + S+LS CA L G+ H A+K + ++ V +AL+
Sbjct: 357 QMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 416
Query: 255 DMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
DMY KC S + A F+ +P +R++V W +IGG A G A+ AL F +M +
Sbjct: 417 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 476
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAY 371
PN T+ C L AC+R GA+ G +I ++ L+ + A C++D+ ++G VD A
Sbjct: 477 PNAFTISCALMACARLGALRFGRQI-HAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 535
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ M R +S W +L+ ++G+ E
Sbjct: 536 VVFDNMHQRNGVS-WTSLMTGYGMHGRGE 563
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN I +V G ++ + + ++R G PD TF L AC + + G +H +
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---NDVSWCSMLVVYVQNYEEEN 195
SGF+ NV V NGLV YG+C A+ VFD + ++ + VSW S++ Y+Q +
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 196 GCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+MF + G+ P + +VL ACA + G+ VH A+++ + ++FVG+A+V
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG +++A F +M +++V WNA++ GY+ G D AL FE++ + E N
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIEL--N 331
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
VT V++ ++ G + + +F M L
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRL 360
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 334/580 (57%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN T + A + L + K +H ++ G +VFV + DMYSK G A ++
Sbjct: 120 PNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ M ERN+ +WNA +S G + AID F +RR G D T + + A L
Sbjct: 180 FESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL 239
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
Q+G +HGF++R+G++ + + L+D Y N V A VF + K+ +W ML +
Sbjct: 240 QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGF 299
Query: 188 VQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ + F + ++ ++ +LS+C+ L+ GR VHA+A+K C N
Sbjct: 300 SSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANN 359
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
IFVGSA++DMY CG+++DA+ F M E+++VCWNA+I G G+ A+ F +M
Sbjct: 360 IFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG 419
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ T V VL ACS AG V +G++IFY M P +HYACV+D+LGRAG
Sbjct: 420 SGLD--PDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQ 477
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+D AY I MP +P V+ LL ACR++G +LG + +F+++PND+G +VLLSNM
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNM 537
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A G WE + R ++ +KK G S I + I+ F A + H + +I+ +L L
Sbjct: 538 YALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGL 597
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K AGY+P+TN L DV ++ K + HHSEK+A+AFGL+ PG IRITKNLR C
Sbjct: 598 ILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTC 657
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSA KF+S + GR ++++D NRFH F DG CSC DYW
Sbjct: 658 NDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 196/390 (50%), Gaps = 5/390 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA + SG H+ F+ S + Y GL DA ++F P +N+ +W IS
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
AID F + +P+ +T + L A ++ L+++ + +H F VR GF+GNV V
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y K +G+A+ +F+ + ++N VSW +++ Y + E +F RR+G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ I S++ A + L++G +H ++ E + + +AL+D+Y + DA
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M +++ W ++ G++ H D A+ F +M ++ + + + L+ +LS+CS +G
Sbjct: 281 FSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS-IVLMGILSSCSHSG 339
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+++G ++ +++ +K + V+D+ G ++ A M + + W A+
Sbjct: 340 ALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV-CWNAM 397
Query: 390 L--NACRVYGKPELGRIAADNLFKLDPNDS 417
+ N YG + LDP++S
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ + + +T L AS ++ G +H +++G +D + + D+Y
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
DDA ++F EM +++A W ++ G AI F + + D I L+
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+CS LQ GR++H +++ F N+ V + ++D Y C + AK F G+ +K+ V
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ N + +FL + G++P + SVL AC+ + G + V
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453
Query: 240 KACVE-GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
K + N+ + ++D+ G+ G + A N MP + + ++ ++G A + H ++
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG--ACRIHGNIK 511
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
L E++ E PN +LS +G+K+
Sbjct: 512 LG--HEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
S ++ L+ + +HA + + + N F+ ++L++ Y CG + DA+ F+ P +N+V
Sbjct: 29 SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W +I G A A+ F EMT + PN VT+ VL A + G + K +
Sbjct: 89 SWTILISGLAKNDCFVEAIDVFREMTMGNFK--PNAVTISSVLPAFANLGLIRIA-KSVH 145
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
++ G + +VD+ + G + A ++ + M R +S W A+++ +G
Sbjct: 146 CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVS-WNAIVSGYSDHGFS 204
Query: 400 ELGRIAADNLFKL 412
E A +LF L
Sbjct: 205 E----EAIDLFNL 213
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 321/544 (59%), Gaps = 4/544 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + + YSK G + A ++FD M ER+L +WN I A+D F+ +R
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 104 RTGGEPDLITFCAFLNACS-DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
G + T + L+AC +C L+ ++LH V++ D N+ V L+D Y KC +
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
A VF+ + DK+ V+W SM+ YVQN E ++ A+R +E F +SSV+ AC
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ +A L G+ +HAV K+ N+FV S+ VDMY KCGS++++ I F+++ E+NL WN
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
II G+A + FE+M PN VT +LS C G VE+G + F M
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMH--PNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
YG+ P HY+C+VD+LGRAGL+ AYE+IK +P PT S+WG+LL +CRVY EL
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
+AA+ LF+L+P ++GNHVLLSN++AA +WEE RK ++D +KK G SWI +K++
Sbjct: 452 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Query: 463 IHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
+H F ++ H R EI + L L + + GY P L+DVE +K + HSEK+
Sbjct: 512 VHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKL 571
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
AL FGL+ +P P+RI KNLRIC DCH K S R +IVRD NRFH F DG+CSC
Sbjct: 572 ALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSC 631
Query: 583 SDYW 586
D+W
Sbjct: 632 GDFW 635
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 173/329 (52%), Gaps = 7/329 (2%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ + + HG ++R +G+V++ N L++ Y KC V LA+ VFDG+++++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ +Y +N E +FL R EG + +F ISSVLSAC + +H +
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+VK C++ N++VG+AL+D+Y KCG I+DA F M +++ V W++++ GY + + A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L + M E N TL V+ ACS A+ +G K +++ K G +
Sbjct: 248 LLLYRRAQRMSLE--QNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSA 304
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPN 415
VD+ + G + +Y I E+ + + +W +++ + +P+ I + + + + PN
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ LLS + TG EE K M+
Sbjct: 364 EVTFSSLLS-VCGHTGLVEEGRRFFKLMR 391
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 165/340 (48%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E ++FT + A + K+LH L++K+ +++VG + D+Y+K G+
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ M +++ TW++ ++ V + A+ + +R E + T + + A
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ + L G+Q+H + +SGF NV V + VD Y KC + + ++F + +KN W
Sbjct: 273 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 332
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA-V 239
+++ + ++ + +F +++G+ P + SS+LS C +E GR +
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 392
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ N+ S +VD+ G+ G + +A +P + W +++ + ++A
Sbjct: 393 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAE 452
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ E++ + E N+V L + +A + + K K+
Sbjct: 453 VAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
++ +L CAR + ++ H ++ +EG++ + + L++ Y KCG ++ A F+ M
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACS-RAGAV 331
ER+LV WN +IG Y AL F E MR E + T+ VLSAC A+
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLE---MRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
E K + +++K I ++DL + G++ A ++ + M + +++ W +++
Sbjct: 180 E--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMV 235
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 334/557 (59%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH + + G + V + Y++ G ++++FD M + +++WNA +
Sbjct: 327 KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQN 386
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ A+D ++ + +G +PD T + L ACS L G ++HGF +R+G + +
Sbjct: 387 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 446
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+ Y C + A+V+FDG+ ++ VSW M+ Y QN + +F +G++
Sbjct: 447 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 506
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + I V AC++++ L LG+ +H A+KA + +IFV S+++DMY K G I ++
Sbjct: 507 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 566
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+++ E+++ WN II GY G AL FE+M +R P+ T +L ACS AG
Sbjct: 567 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM--LRLGLKPDDFTFTGILMACSHAG 624
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE G++ F M + I+P EHY CVVD+LGRAG +D A +I+EMP P +W +L
Sbjct: 625 LVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 684
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CR++G LG A+ L +L+P N+VL+SN+FA +G+W++ VR MKD+G++
Sbjct: 685 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 744
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K AGCSWI V ++H F D E++ +L ++ + GY PDT L+D+EEE
Sbjct: 745 KDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEE 804
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+K+ + HSEK+A++FGL+ G+P+R+ KNLRICGDCH+A KFIS +V R+++VRDN
Sbjct: 805 DKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDN 864
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 865 KRFHHFRDGICSCGDYW 881
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 181/348 (52%), Gaps = 15/348 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT PC+ KA + L G+ +H +A K + DVFVG + MY K GL ++A K+
Sbjct: 99 PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKV 158
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDC 124
F+ MPERNL +WN+ I G + + +AF + G E PD+ T L C+
Sbjct: 159 FEHMPERNLVSWNSIICGFSENGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCAGE 217
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++ G +HG V+ G + + V N L+D Y KC + A+++FD KN VSW SM+
Sbjct: 218 EDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMI 277
Query: 185 VVYVQNYEEENGCQMFLTARREGVE-----PKDFMISSVLSACARIAGLELGRSVHAVAV 239
Y + EE+ C+ F ++ E +F I +VL C + L+ + +H +
Sbjct: 278 GGYAR---EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ ++ N V +A + Y +CG++ +E F+ M + + WNA++ GYA AL
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+ +MT + P++ T+ +L ACSR ++ G +I + L+ G+
Sbjct: 395 LYLQMTDSGLD--PDWFTIGSLLLACSRMKSLHYGEEI-HGFALRNGL 439
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 181/375 (48%), Gaps = 12/375 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H LA+K G ++ V S DMYSK +A +FD+ ++N+ +WN+ I
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGY-- 280
Query: 89 GGRPKNAIDAFINLRRTGGE-----PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
R ++ F L++ E D T L C + S LQ ++LHG+ R G
Sbjct: 281 -AREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQ 339
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
N V N + Y +C + ++ VFD + K SW ++L Y QN + ++L
Sbjct: 340 SNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM 399
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
G++P F I S+L AC+R+ L G +H A++ + + F+G +L+ +Y CG
Sbjct: 400 TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKP 459
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A++ F+ M R+LV WN +I GY+ G D A++ F +M S + P + ++CV
Sbjct: 460 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ--PYEIAIMCVCG 517
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS+ A+ G K + LK + + ++D+ + G + + I + +
Sbjct: 518 ACSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 576
Query: 384 SVWGALLNACRVYGK 398
S W ++ ++G+
Sbjct: 577 S-WNVIIAGYGIHGR 590
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 176/368 (47%), Gaps = 8/368 (2%)
Query: 28 TGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G++LH + S Q +D + MYS G D+ +FD++ +NL WNA +S
Sbjct: 16 VGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAY 75
Query: 87 VLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
++A+ F L T +PD T + AC+ L LG+ +HG + +
Sbjct: 76 TRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD 135
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---YEEENGCQMFLT 202
V V N L+ YGKC V A VF+ + ++N VSW S++ + +N E N + L
Sbjct: 136 VFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLV 195
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
E P + +VL CA +E G +VH +AVK + + V ++L+DMY KC
Sbjct: 196 G-EESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRF 254
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ +A++ F+K ++N+V WN++IGGYA + ++M + + + T++ VL
Sbjct: 255 LSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVL 314
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
C ++ +K + + ++G++ + R G + + + M + T
Sbjct: 315 PVCLERSELQS-LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTK-T 372
Query: 383 ISVWGALL 390
+S W ALL
Sbjct: 373 VSSWNALL 380
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 149/291 (51%), Gaps = 13/291 (4%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG-LVDFYGKCNEVGLAKVVFDGIID 174
L AC +++GR+LH + S N V N ++ Y C +++VFD +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGR 232
KN W +++ Y +N E+ +F L + E +P +F + V+ ACA + L LG+
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH-KPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H +A K + ++FVG+AL+ MYGKCG +++A F MPERNLV WN+II G++ G
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ ++F EM VP+ TLV VL C+ +EKGM + + + +K G+
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV-HGLAVKLGLNEELM 240
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL-------NACRVY 396
++D+ + + A +++ + + I W +++ + CR +
Sbjct: 241 VNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGGYAREEDVCRTF 290
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 2/315 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT L A S + G+++H AL++G D F+G S +Y G A
Sbjct: 404 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQ 463
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M R+L +WN I+ G P AI+ F + G +P I ACS S
Sbjct: 464 VLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS 523
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG++LH F +++ ++ V + ++D Y K +GL++ +FD + +K+ SW ++
Sbjct: 524 ALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIA 583
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVE 244
Y + + ++F R G++P DF + +L AC+ +E G + +E
Sbjct: 584 GYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIE 643
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VDM G+ G I DA +MP + + W++++ G+ + +
Sbjct: 644 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANK 703
Query: 304 MTSMRCEAVPNYVTL 318
+ + E NYV +
Sbjct: 704 LLELEPEKPENYVLI 718
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P + C+ A S L GK+LH ALK+ D+FV S DMY+K G
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++FD + E+++A+WN I+ + GR K A++ F + R G +PD TF L A
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ G + + L + + +VD G+ + A +++ + D +
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 679
Query: 179 SWCSML 184
W S+L
Sbjct: 680 IWSSLL 685
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 344/587 (58%), Gaps = 7/587 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I P++FTFP + KA S L G ++H +K G VF+ S MY K
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + ++FDEMP++N +W+A I + R K F + G P + A LNA
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNA 117
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + ++ +V +G D + SV + + +C V +A+ +FDGI+ K+ V+W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ + YV+ + +G+ P + V+ AC+ +A +L VH +
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237
Query: 241 ACVEGNIF-VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ V +AL+D+Y KCGS+ A F+ M ERN++ W+A+I GY G AL+
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M + P+++T V +LSACS +G V +G + F SM +G+ P EHYAC+VD
Sbjct: 298 LFDQM---KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGRAG +D A + I+ MP+RP +VWGALL ACR++ +L + A LF LDP+++G
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGR 414
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V+L N++ TG+ +EAD +R MK+ G+KK AG S I +KN+++ F A D SH + I
Sbjct: 415 YVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLI 474
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L +L + ++ GY PD NF L+DV+EE K + + HSEK+A+ FGL+ + PG IRI
Sbjct: 475 YSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRI 534
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A KFIS + GRE++VRD +RFH F +G CSC DYW
Sbjct: 535 RKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/532 (41%), Positives = 322/532 (60%), Gaps = 10/532 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G +A ++F+E P R++ TW A +S V G A F + E + +++
Sbjct: 245 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSW 300
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + C + R+L + NVS N ++ Y + ++ A+ FD +
Sbjct: 301 NAIIAGYVQCKRMDQARELFEAMPCQ----NVSSWNTMITGYAQNGDIAQARNFFDRMPQ 356
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +SW +++ Y Q+ E +F+ +R+G +S LS CA IA LELG+ V
Sbjct: 357 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 416
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VKA +E +VG+AL+ MY KCG+I DA I F + E+ +V WN +I GYA G
Sbjct: 417 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 476
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL FE M + +P+ VT+V VLSACS G V+KG + FYSMT YGI ++HY
Sbjct: 477 KEALMLFESMK--KTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 534
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG +D A ++K MP P + WGALL A R++G ELG AA +F+++P
Sbjct: 535 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 594
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SG +VLLSN++AA+GRW + +R M+D G+KK G SW+ V+N+IH F D+ H
Sbjct: 595 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 654
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I L +L +MK GY+ T L+DVEEEEK+ + +HSEK+A+AFG++AIP G
Sbjct: 655 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 714
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCH+A K IS IVGR +I+RD++RFH F G CSC DYW
Sbjct: 715 RPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 30/341 (8%)
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD 110
A + + G D A ++F+ MP R+ +WNA IS + + A F + D
Sbjct: 55 AITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM----PTRD 110
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
L+++ ++ C L+ R L + + +V N ++ Y + V AK +FD
Sbjct: 111 LVSWNVMISGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQNGYVKEAKEIFD 166
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ KN +SW ML YVQN E+ ARR D+ + S C ++
Sbjct: 167 EMPCKNSISWNGMLAAYVQNGRIED-------ARRLFESKADWELISW--NCMMGGYVKR 217
Query: 231 GRSVHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
R V A + E + + ++ Y + G + +A+ F + P R++ W A++ GY
Sbjct: 218 NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYV 277
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G D A F+ M N V+ +++ + +++ ++F +M +
Sbjct: 278 QNGMLDEARRVFDGMPE------KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ----- 326
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ ++ + G + +A MP R +IS W A++
Sbjct: 327 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS-WAAII 366
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 37/376 (9%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL- 133
++ WN I+N + G+ +A+ F ++ R I++ A ++ C L RQL
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSS----ISWNAMISGCLSNDKFYLARQLF 103
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
R NV + +G V + + A+++FD + +++ VSW +ML Y QN
Sbjct: 104 EKMPTRDLVSWNVMI-SGCVRY----RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+ ++F E + +L+A + +E R + ++ + + + +
Sbjct: 159 KEAKEIF----DEMPCKNSISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCM 210
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+ Y K + DA F++MPER+ V WN +I GYA G A FEE V
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVR 264
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ T ++S + G +++ ++F M K + + ++ + +D+A E+
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQAREL 319
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDPN-DSGNHVLLSNMFAATG 431
+ MP + +S W ++ G + G IA A N F P DS + + +A +G
Sbjct: 320 FEAMPCQ-NVSSWNTMIT-----GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG 373
Query: 432 RWEEADLVRKEMKDVG 447
EEA + EMK G
Sbjct: 374 YGEEALHLFVEMKRDG 389
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ N TF + + GKQ+H +K+G +VG + MY K G
Sbjct: 385 MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 444
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F+ + E+ + +WN I+ G K A+ F ++++TG PD +T L+A
Sbjct: 445 IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 504
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + G N ++D G+ + A+ + + + +
Sbjct: 505 CSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAA 564
Query: 179 SWCSML 184
+W ++L
Sbjct: 565 TWGALL 570
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
D + V W + +++N + ++ ++F + R + MIS LS +L
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQL--- 102
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+ + V N+ + + + +++ A + F++MPER++V WNA++ GYA G+
Sbjct: 103 FEKMPTRDLVSWNVMISGCV-----RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A F+EM C+ N ++ +L+A + G +E ++F S I
Sbjct: 158 VKEAKEIFDEMP---CK---NSISWNGMLAAYVQNGRIEDARRLFESKADWELIS----- 206
Query: 354 YACVV-DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ C++ + R LVD A I MP R +S W +++ G EL + A LF+
Sbjct: 207 WNCMMGGYVKRNRLVD-ARGIFDRMPERDEVS-WNTMISGYAQNG--EL--LEAQRLFEE 260
Query: 413 DP 414
P
Sbjct: 261 SP 262
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/591 (41%), Positives = 351/591 (59%), Gaps = 31/591 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I P FT + ++L G+Q+H +LK G +V V + +Y++TG
Sbjct: 406 MRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGC 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
++ K+F MPE + +WN+ I R A+ F+N R G + + ITF + L+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLS 525
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-NDV 178
A S S +LG+Q+HG ++ + N L+ YGKC E+ + +F + ++ +DV
Sbjct: 526 AVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDV 585
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W SM+ Y+ N + + G FM ++VLSA A +A LE G VHA +
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+AC+E ++ VGSALVDMY KCG + A FN MP A+M L
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPL-----------------FANMKL 688
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ P++VT V VLSACS AG +E+G K F SM+ YG+ P EH++C+
Sbjct: 689 DG---------QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 739
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYG-KPELGRIAADNLFKLDPND 416
DLLGRAG +D+ + I++MPM+P + +W +L AC R G K ELG+ AA+ LF+L+P +
Sbjct: 740 DLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 799
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLL NM+AA GRWE+ RK+MKD +KK AG SW+++K+ +H+F A D SH
Sbjct: 800 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDA 859
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI-PPGV 535
I L +L +M+ AGY+P T FALYD+E+E K + +HSEK+A+AF L A +
Sbjct: 860 DVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTL 919
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+CGDCHSAFK IS I GR++I+RD+NRFH F DG CSCSD+W
Sbjct: 920 PIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 194/394 (49%), Gaps = 15/394 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
P ++TF L + +L P +Q+ KSG + D+FVG ++K+G A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHAR 263
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSDC 124
K+F++M RN T N + V + A F+++ P+ ++ L++ +
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEY 321
Query: 125 SL-----LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
SL L+ GR++HG ++ +G D V + NGLV+ Y KC + A+ VF + +K+ V
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSV 381
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+ QN + + + RR + P F + S +S+CA + +LG+ +H +
Sbjct: 382 SWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGES 441
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA-DMA 297
+K ++ N+ V +AL+ +Y + G + + F+ MPE + V WN+IIG A + A
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEA 501
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
++ F + ++R N +T VLSA S E G +I + + LKY I A +
Sbjct: 502 VACF--LNALRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKYNIADEATTENAL 558
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G+ G +D +I M R W ++++
Sbjct: 559 IACYGKCGEMDGCEKIFSRMSERRDDVTWNSMIS 592
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 158/345 (45%), Gaps = 23/345 (6%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K H+ K+G DV++ + + Y +TG A K+FDEMP RN +W +S
Sbjct: 20 AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSR 79
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS--DCSLLQLGRQLHGFLVRSGFDGNV 146
G K A+ ++ + G + F + L AC D + GRQ+HG L + + +
Sbjct: 80 NGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDA 139
Query: 147 SVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N L+ Y KC +G A FD + KN VSW S++ VY Q ++ +MF + +
Sbjct: 140 VVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQC 199
Query: 206 EGVEPKDFMISS-VLSACARI-AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+G P ++ S V +AC+ + L + K+ ++FVGS LV + K GS+
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSL 259
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A FN+M RN V N ++ G Q + A F +M SM + +YV L+
Sbjct: 260 IHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
YS+ + G+K G E + V+ GLVD
Sbjct: 320 E--------------YSLAEEVGLKKGREVHGHVIT----TGLVD 346
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 187/406 (46%), Gaps = 22/406 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIP--VTGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
M +E + N + F +A L + G+Q+H L K D V MY K
Sbjct: 93 MVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKC 152
Query: 59 GLK-DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G A + FD++ +N +WN+ IS G + A F +++ G P TF +
Sbjct: 153 GGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSL 212
Query: 118 LNACSDCSL----LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ CSL ++L Q+ + +SGF ++ V +GLV + K + A+ +F+ +
Sbjct: 213 VTTA--CSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQME 270
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLS-----ACARIAG 227
+N V+ ++V V+ E ++F+ V P+ ++I +LS + A G
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVG 328
Query: 228 LELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L+ GR VH V V+ + +G+ LV+MY KCGSI DA F M E++ V WN++I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMIT 388
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
G A+ ++ M R E +P TL+ +S+C+ + G +I + +LK G
Sbjct: 389 GLDQNSCFIEAVERYQSMR--RHEILPGSFTLISSISSCASLKWAKLGQQI-HGESLKLG 445
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
I ++ L G ++ +I MP +S W +++ A
Sbjct: 446 IDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVS-WNSIIGA 490
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/582 (40%), Positives = 334/582 (57%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A++ + G+ +H+ A K G V +YSK G + A
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M + +L +NA IS + G ++++ F L G P+ T A + S
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG 327
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L + LHGF+++SGF N V + + + N++ A+ FD + +K SW +M+
Sbjct: 328 HDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMIS 387
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN E +F + V P ISS LSACA++ L LG+ +H + + +E
Sbjct: 388 GYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEP 447
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++V +AL+DMY KCGSI +A FN M +N+V WNA+I GY G AL +++M
Sbjct: 448 NVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM- 506
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ +P T + VL ACS G VE+G K+F SMT Y I PG EH C+VDLLGRAG
Sbjct: 507 -LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAG 565
Query: 366 LVDRAYEIIKEMPMRPT-ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
+ A+E+I E P VWGALL AC V+ +L ++A+ LF+LDP +SG +VLLS
Sbjct: 566 QLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLS 625
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N+ + ++ EA +VR+E K + K G + I + N+ H+F A D +H ++ I + L
Sbjct: 626 NLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLE 685
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
KL +M AGY P+T ALYDVEEEEK V HSEK+A+AFGL++ PG IRI KNLR
Sbjct: 686 KLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLR 745
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+A KFIS + R ++VRD +RFH F DG CSC DYW
Sbjct: 746 VCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 177/368 (48%), Gaps = 9/368 (2%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
LHALA+ +G D FV + +Y D A K+FD +P + WN ++ G
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLA----GLS 191
Query: 92 PKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A+++F + G PD T + L A ++ + + +GR +H F + G + V
Sbjct: 192 GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
GL+ Y KC +V A+ +FD + + V++ +++ Y N + +F G+ P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ +++ + L + +H +K+ N V +A+ ++ + ++ A AF
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ MPE+ + WNA+I GYA G +MA++ FE+M + PN +T+ LSAC++ GA
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVR--PNPITISSTLSACAQLGA 429
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G K + + + ++P ++D+ + G + A I M + +S W A++
Sbjct: 430 LSLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS-WNAMI 487
Query: 391 NACRVYGK 398
++G+
Sbjct: 488 AGYGLHGQ 495
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/532 (41%), Positives = 327/532 (61%), Gaps = 10/532 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G A ++FDE P R++ TW A +S V G A F + E + +++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSY 300
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + + + R+L S N+S N ++ YG+ ++ A+ FD +
Sbjct: 301 NAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ VSW +++ Y Q+ E MF+ +++G LS CA IA LELG+ +
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H AVK FVG+AL+ MY KCGSI +A F + E+++V WN ++ GYA G
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL+ FE M + + P+ +T+V VLSACS G +++G + FYSMT YG+ P ++HY
Sbjct: 477 RQALTVFESMKTAGVK--PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG ++ A ++I+ MP +P + WGALL A R++G ELG AA+ +FK++P
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+SG +VLLSN++AA+GRW +AD +R +M+D+G++K G SW+ V+N+IH F D SH
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHP 654
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I A L +L +M+ GY+ T L+DVEEEEK + +HSEK+A+AFG++ IP G
Sbjct: 655 EKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGG 714
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCHSA K IS IVGR +I+RD++RFH F +G+CSC DYW
Sbjct: 715 RPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 57/260 (21%)
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G ++ G + FY M +Y + P ++HY C++DLLGR VDR E G
Sbjct: 777 TGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGR---VDRLEE--------------G 819
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL A R++G ELG AA FK+ P +SG +M+DVG
Sbjct: 820 ALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRDVG 858
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K G SW V+N+IH F + L++ RE + G++ + + + + E
Sbjct: 859 VQKVPGYSWFEVQNKIHTFS-----------VGLFLSRERENI---GFLEELDLKMRERE 904
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN-LRICGDCHSAFKFISGIVGREVIV 566
EE++ T + + SE +A A G++ IP G P R+ K + +C DC SA K +S IVGR + +
Sbjct: 905 EEKERT-LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITL 963
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+ HRF + CSC +YW
Sbjct: 964 RDS---HRFNESICSCGEYW 980
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 163/371 (43%), Gaps = 48/371 (12%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA ++FD MPE+++ +WN+ +S G A + F N+ E + I++ L A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAA-- 182
Query: 123 DCSLLQLGRQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ GR L S D ++ N L+ + + ++G A+ +FD + ++ +SW
Sbjct: 183 ---YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV------- 234
+M+ Y Q ++F + V F ++++S + L+ ++
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Query: 235 HAVAVKACVEG--------------------NIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ V+ A + G NI + ++ YG+ G I A F+ MP
Sbjct: 296 NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+R+ V W AII GYA GH + AL+ F E+ E++ N T C LS C+ A+E G
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESL-NRATFGCALSTCADIAALELG 413
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+I + +K G G ++ + + G +D A + + + + +S W +L
Sbjct: 414 KQI-HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS-WNTMLAG-- 469
Query: 395 VYGKPELGRIA 405
Y + GR A
Sbjct: 470 -YARHGFGRQA 479
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 163/390 (41%), Gaps = 53/390 (13%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ A + + G D A +F+ MP R+ ++NA IS + + A + F +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E DL ++ L L R+L + + +V N L+ Y + V
Sbjct: 107 ---PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP----EKDVVSWNSLLSGYAQNGYVD 159
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT----------------ARREG 207
A+ VFD + +KN +SW +L YV N E C +F + R++
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219
Query: 208 VEPKDFMI-----------SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+ ++ ++++S A+ GL R + ++F +A+V
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRL----FDESPTRDVFTWTAMVSG 275
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y + G + +A+ F++MPE+N V +NA+I GY D+A FE SM C + ++
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFE---SMPCRNISSWN 332
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI--- 373
T++ + + G + + K F M + + +A ++ ++G + A +
Sbjct: 333 TMI---TGYGQIGDIAQARKFFDMMPQRDCVS-----WAAIIAGYAQSGHYEEALNMFVE 384
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGR 403
IK+ + +G L+ C ELG+
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGK 414
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++++ S N TF C + + GKQ+H A+K G FVG + MY K G
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A+ F+ + E+++ +WN ++ G + A+ F +++ G +PD IT L+A
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 121 CSDCSLLQLGRQ 132
CS LL G +
Sbjct: 505 CSHTGLLDRGTE 516
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 25/275 (9%)
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ D + + W + +++N ++ +F T R + MIS L R + L
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYL----RNSKFNLA 99
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R++ E ++F + ++ Y + + DA F+ MPE+++V WN+++ GYA
Sbjct: 100 RNL----FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQN 155
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ D A F+ M N ++ +L+A G +E+ +F S + I
Sbjct: 156 GYVDEAREVFDNMPE------KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS--- 206
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ C++ R + A + +MP+R IS W +++ G G A LF
Sbjct: 207 --WNCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGG----GLSQARRLFD 259
Query: 412 LDPN-DSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
P D + + + G +EA EM +
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/532 (41%), Positives = 327/532 (61%), Gaps = 10/532 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G A ++FDE P R++ TW A +S V G A F + E + +++
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSY 300
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + + + R+L S N+S N ++ YG+ ++ A+ FD +
Sbjct: 301 NAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ VSW +++ Y Q+ E MF+ +++G LS CA IA LELG+ +
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQI 416
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H AVK FVG+AL+ MY KCGSI +A F + E+++V WN ++ GYA G
Sbjct: 417 HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFG 476
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL+ FE M + + P+ +T+V VLSACS G +++G + FYSMT YG+ P ++HY
Sbjct: 477 RQALTVFESMKTAGVK--PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG ++ A ++I+ MP +P + WGALL A R++G ELG AA+ +FK++P
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+SG +VLLSN++AA+GRW +AD +R +M+D+G++K G SW+ V+N+IH F D SH
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHP 654
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I A L +L +M+ GY+ T L+DVEEEEK + +HSEK+A+AFG++ IP G
Sbjct: 655 EKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGG 714
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCHSA K IS IVGR +I+RD++RFH F +G+CSC DYW
Sbjct: 715 RPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 163/371 (43%), Gaps = 48/371 (12%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA ++FD MPE+++ +WN+ +S G A + F N+ E + I++ L A
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAA-- 182
Query: 123 DCSLLQLGRQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ GR L S D ++ N L+ + + ++G A+ +FD + ++ +SW
Sbjct: 183 ---YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV------- 234
+M+ Y Q ++F + V F ++++S + L+ ++
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Query: 235 HAVAVKACVEG--------------------NIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ V+ A + G NI + ++ YG+ G I A F+ MP
Sbjct: 296 NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+R+ V W AII GYA GH + AL+ F E+ E++ N T C LS C+ A+E G
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESL-NRATFGCALSTCADIAALELG 413
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+I + +K G G ++ + + G +D A + + + + +S W +L
Sbjct: 414 KQI-HGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS-WNTMLAG-- 469
Query: 395 VYGKPELGRIA 405
Y + GR A
Sbjct: 470 -YARHGFGRQA 479
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 163/390 (41%), Gaps = 53/390 (13%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ A + + G D A +F+ MP R+ ++NA IS + + A + F +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E DL ++ L L R+L + + +V N L+ Y + V
Sbjct: 107 ---PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP----EKDVVSWNSLLSGYAQNGYVD 159
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT----------------ARREG 207
A+ VFD + +KN +SW +L YV N E C +F + R++
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219
Query: 208 VEPKDFMI-----------SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+ ++ ++++S A+ GL R + ++F +A+V
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRL----FDESPTRDVFTWTAMVSG 275
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y + G + +A+ F++MPE+N V +NA+I GY D+A FE SM C + ++
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFE---SMPCRNISSWN 332
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI--- 373
T++ + + G + + K F M + + +A ++ ++G + A +
Sbjct: 333 TMI---TGYGQIGDIAQARKFFDMMPQRDCVS-----WAAIIAGYAQSGHYEEALNMFVE 384
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGR 403
IK+ + +G L+ C ELG+
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGK 414
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++++ S N TF C + + GKQ+H A+K G FVG + MY K G
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A+ F+ + E+++ +WN ++ G + A+ F +++ G +PD IT L+A
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 121 CSDCSLLQLGRQ 132
CS LL G +
Sbjct: 505 CSHTGLLDRGTE 516
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 25/275 (9%)
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ D + + W + +++N ++ +F T R + MIS L R + L
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYL----RNSKFNLA 99
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R++ E ++F + ++ Y + + DA F+ MPE+++V WN+++ GYA
Sbjct: 100 RNL----FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQN 155
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ D A F+ M N ++ +L+A G +E+ +F S + I
Sbjct: 156 GYVDEAREVFDNMPE------KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS--- 206
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ C++ R + A + +MP+R IS W +++ G G A LF
Sbjct: 207 --WNCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGG----GLSQARRLFD 259
Query: 412 LDPN-DSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
P D + + + G +EA EM +
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/628 (38%), Positives = 357/628 (56%), Gaps = 49/628 (7%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ + + A +++ GKQ+H AL+SG DVFVG + DMY+K G+ ++A+
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 305
Query: 66 KMFDEMPERNLATWNAYIS------------------------------NAVLGGRPK-- 93
K+F+ M +++ +WNA ++ +AV+ G +
Sbjct: 306 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
Query: 94 ---NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGFDGN--- 145
A+D F + G EP+++T + L+ C+ L G++ H ++ D N
Sbjct: 366 LGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPG 425
Query: 146 --VSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMF- 200
+ V N L+D Y KC A+ +FD I D++ V+W ++ Q+ E ++F
Sbjct: 426 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 485
Query: 201 -LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYG 258
+ V P F IS L ACAR+ L GR +HA ++ E +FV + L+DMY
Sbjct: 486 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 545
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
K G + A + F+ M +RN V W +++ GY G + AL F EM + VP+ VT
Sbjct: 546 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ--KVXLVPDGVTF 603
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V VL ACS +G V++G+ F M +G+ PGAEHYAC+VDLL RAG +D A E+I+ MP
Sbjct: 604 VVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP 663
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
M+PT +VW ALL+ACRVY ELG AA+ L +L+ + G++ LLSN++A W++
Sbjct: 664 MKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVAR 723
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+R MK+ GIKK GCSW+ + F A D SH + +I +L L + +KA GY+PD
Sbjct: 724 IRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 783
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
FAL+DV++EEK + HSEK+ALA+G++ PG PIRITKNLR CGDCHSAF +IS
Sbjct: 784 NRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISI 843
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I+ E+IVRD++RFH F +G CSC YW
Sbjct: 844 IIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 211/449 (46%), Gaps = 51/449 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R P+ +TFP + KA + G +HA+ SG +VFVG MY + G
Sbjct: 136 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGA 195
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCA 116
++A ++FDEM ER +L +WN+ ++ + GG A+ F + G PD ++
Sbjct: 196 WENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVN 255
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L AC+ G+Q+HG+ +RSG +V V N +VD Y KC + A VF+ + K+
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 315
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARRE------------------------------ 206
VSW +M+ Y Q ++ +F R E
Sbjct: 316 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 375
Query: 207 -----GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-------GNIFVGSALV 254
G EP + S+LS CA L G+ H A+K + ++ V +AL+
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 435
Query: 255 DMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
DMY KC S + A F+ +P +R++V W +IGG A G A+ AL F +M +
Sbjct: 436 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 495
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAY 371
PN T+ C L AC+R GA+ G +I ++ L+ + A C++D+ ++G VD A
Sbjct: 496 PNAFTISCALMACARLGALRFGRQI-HAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 554
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ M R +S W +L+ ++G+ E
Sbjct: 555 VVFDNMHQRNGVS-WTSLMTGYGMHGRGE 582
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN I +V G ++ + + ++R G PD TF L AC + + G +H +
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK---NDVSWCSMLVVYVQNYEEEN 195
SGF+ NV V NGLV YG+C A+ VFD + ++ + VSW S++ Y+Q +
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 196 GCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+MF + G+ P + +VL ACA + G+ VH A+++ + ++FVG+A+V
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG +++A F +M +++V WNA++ GY+ G D AL FE++ + E N
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIEL--N 350
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
VT V++ ++ G + + +F M L
Sbjct: 351 VVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 355/622 (57%), Gaps = 39/622 (6%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+R + P+ +TFP + A + L K +H L G D+++G + DMY +
Sbjct: 107 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDL 166
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE------PDLITFC 115
D A K+F+EMP R++ +WN+ IS G A++ + + E PDL+T
Sbjct: 167 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTIT 226
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L AC L+ G+ +H +++ SG++ + + N L++ Y KC + ++ VF G+ K
Sbjct: 227 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 286
Query: 176 NDVSWCSMLVVYVQNYEE-------EN------------------------GCQMFLTAR 204
+ VSW SM+ VY+QN + EN G +M R
Sbjct: 287 DSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMR 346
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EGV P + S+L C+ +A G+ +H K +E ++ VG+ L++MY KCGS++
Sbjct: 347 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 406
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
++ F M +++V W A+I G A+ +F EM + VP++V V ++ A
Sbjct: 407 NSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA--AGIVPDHVAFVAIIFA 464
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G VE+G+ F+ M Y I+P EHYACVVDLL R+ L+D+A + I MP++P S
Sbjct: 465 CSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSS 524
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+WGALL+ACR+ G E+ ++ + +L+P+D+G +VL+SN++AA G+W++ +RK +K
Sbjct: 525 IWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIK 584
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
G+KK GCSW+ ++N++++F E+ E+ +L L M GYI + F L+
Sbjct: 585 ARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLH 644
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
D++E+EK + HSE++A+AFGL+ PG P+++ KNLR+C DCH+ K+IS IV RE+
Sbjct: 645 DIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQREL 704
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+VRD NRFH F DG CSC DYW
Sbjct: 705 LVRDANRFHVFKDGACSCGDYW 726
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 189/422 (44%), Gaps = 38/422 (9%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD-EM 71
F + +A ++ +LH+L + G H V Y+ + +F
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P N+ WN+ I G A+ + +R +PD TF + +NAC+ ++ +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+H ++ GF ++ + N L+D Y + N++ A+ VF+ + ++ VSW S++ Y N
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 192 EEENGCQMFLTARREGVE------PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+++ + + +E P I+S+L AC + LE G+ VH + + E
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM- 304
+ + L++MY KCG++ ++ F+ M ++ V WN++I Y G +L FE M
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 305 ---------------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMK 336
+ MR E V P+ T++ +L CS A +G +
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + K G++ ++++ + G + ++++ K M + ++ W AL++AC +Y
Sbjct: 376 I-HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGMY 433
Query: 397 GK 398
G+
Sbjct: 434 GE 435
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E ++P+ T + S L GK++H K G DV VG +MYSK G
Sbjct: 345 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 404
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ ++F M +++ TW A IS + G K A+ AF + G PD + F A + A
Sbjct: 405 LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 464
Query: 121 CSDCSLLQLG 130
CS L++ G
Sbjct: 465 CSHSGLVEEG 474
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/581 (38%), Positives = 343/581 (59%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FT+PC+ + + G+Q+H+L +K+G D++V DMYSK G D A
Sbjct: 341 VRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQ 400
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ D + E+++ +W + I+ V K A++ F ++ G PD I + ++AC+
Sbjct: 401 RILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIK 460
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G Q+H + SG+ +VS+ NGLV Y +C A F+ I K ++W ++
Sbjct: 461 AVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLIS 520
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ Q+ E ++F+ + G + F S +SA A +A ++ G+ +HA +K
Sbjct: 521 GFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTS 580
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +AL+ +YGKCGSI+DA++ F +M +RN V WN II + G AL F++M
Sbjct: 581 ETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMK 640
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ VT V VL+ACS G VE+G+ F SM+ ++GI P +HYACVVD+LGRAG
Sbjct: 641 QQGLK--PSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAG 698
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+DRA ++EMP+ VW LL+AC+V+ E+G AA +L +L+P+DS ++VLLSN
Sbjct: 699 QLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSN 758
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+A TG+W D +RK MKD G++K G SWI VKN +H F D H +I L+
Sbjct: 759 AYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSH 818
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L + + GY + ++ E+E K HSEK+A+AFGL+++P +P+R+ KNLR+
Sbjct: 819 LNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRV 878
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+ KF SG++GRE+++RD RFH F +G CSC DYW
Sbjct: 879 CNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 191/398 (47%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ T L A SA+ GKQLH+ LK+G D + S D+Y K+G
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGD 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++FD N+ WN + + D F + G P+ T+ L
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG Q+H +++GF ++ V L+D Y K + A+ + D I +K+ VSW
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ + + F + G+ P + ++S +SACA I + G +HA
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYV 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + + LV +Y +CG ++A +F + + + WN +I G+A G + AL
Sbjct: 475 SGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKV 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + A N T V +SA + +++G +I ++ +K G E ++ L
Sbjct: 535 FMKMD--QAGAKYNVFTFVSSISASANLADIKQGKQI-HARVIKTGYTSETEISNALISL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
G+ G ++ A EM R +S W ++ C +G+
Sbjct: 592 YGKCGSIEDAKMDFFEMTKRNEVS-WNTIITCCSQHGR 628
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 179/391 (45%), Gaps = 4/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P + + A + + G+ +H K G + FVG + +Y +
Sbjct: 134 MHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRS 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
AD++F +M + T+N IS G A+ F ++ +G PD +T + L A
Sbjct: 194 FRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAA 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ G+QLH +L+++G + + L+D Y K ++ A +FD N V W
Sbjct: 254 CSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q + +F GV P F +L C + LG +H++ +K
Sbjct: 314 NLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIK 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +++V L+DMY K G + A+ + + E+++V W ++I GY AL +
Sbjct: 374 NGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALET 433
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM + C P+ + L +SAC+ AV +G +I ++ G + +V L
Sbjct: 434 FKEMQA--CGIWPDNIGLASAISACAGIKAVHQGSQI-HARVYVSGYSADVSIWNGLVYL 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G+ A+ + + + I+ W L++
Sbjct: 491 YARCGISKEAFSSFEAIEHKEGIT-WNGLIS 520
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 184/381 (48%), Gaps = 9/381 (2%)
Query: 13 FPCLFKA--SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
F C +A S P+ ++HA A+ G +G D+Y+K G A ++F+E
Sbjct: 44 FACALRACRGSGRRWPLV-PEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEE 102
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
+ R+ +W A +S G + A+ + + R+G P + L+AC+ L QLG
Sbjct: 103 LSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG 162
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R +H + + GF V N L+ Y +C LA VF ++ + V++ +++ + Q
Sbjct: 163 RLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQC 222
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F + G+ P I+S+L+AC+ + L G+ +H+ +KA + + +
Sbjct: 223 GHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+L+D+Y K G I++A F+ N+V WN ++ Y G D SF+ M
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY---GQIDDLAKSFDIFYRMLAA 339
Query: 311 AV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
V PN T C+L C+ G + G +I +S+T+K G + ++D+ + G +D+
Sbjct: 340 GVRPNKFTYPCMLRTCTHTGEIGLGEQI-HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDK 398
Query: 370 AYEIIKEMPMRPTISVWGALL 390
A I+ + + +S W +++
Sbjct: 399 AQRILDMIEEKDVVS-WTSMI 418
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/613 (37%), Positives = 350/613 (57%), Gaps = 54/613 (8%)
Query: 25 IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+P T K++H A+++G DVFVG + D Y+K GL ++A K+F+ M +++ +WNA ++
Sbjct: 281 VPQT-KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 339
Query: 85 NAVLGGRPKNAIDAFINLRR-----------------------------------TGGEP 109
G + A + F N+R+ +G P
Sbjct: 340 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 399
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRS----------GFDGNVSVCNGLVDFYGKC 159
+ +T + L+AC+ G ++H + +++ G D ++ V N L+D Y KC
Sbjct: 400 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 459
Query: 160 NEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GVEPKDFMI 215
A+ +FD I ++N V+W M+ + Q + + ++F+ E GV P + I
Sbjct: 460 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 519
Query: 216 SSVLSACARIAGLELGRSVHAVAVK--ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S +L ACA +A + +G+ +HA ++ FV + L+DMY KCG + A F+ M
Sbjct: 520 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 579
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+++ + W +++ GY G AL F++M + VP+ +T + VL ACS G V++
Sbjct: 580 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDITFLVVLYACSHCGMVDQ 637
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G+ F SM+ YG+ P AEHYAC +DLL R+G +D+A+ +K+MPM PT VW ALL+AC
Sbjct: 638 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ EL A + L +++ + G++ L+SN++A GRW++ +R MK GIKK G
Sbjct: 698 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 757
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CSW+ + F D SH + +I A+L L + +KA GY+P+TNFAL+DV+EEEK
Sbjct: 758 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 817
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV E++VRD +RFH
Sbjct: 818 LLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 877
Query: 574 RFWDGYCSCSDYW 586
F +G CSC YW
Sbjct: 878 HFKNGSCSCGGYW 890
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 211/456 (46%), Gaps = 60/456 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ FT P + KA L G H L +G +VF+ + MYS+ G
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
++A +FDE+ +R ++ +WN+ +S V A+D F ++ + T D+
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 265
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC + +++HG +R+G +V V N L+D Y KC + A VF+
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---------------------- 209
+ K+ VSW +M+ Y Q+ E ++F R+E +
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 210 -------------PKDFMISSVLSACARIAGLELGRSVHAVAVKACV----------EGN 246
P I SVLSACA + G +HA ++K C+ + +
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +AL+DMY KC S + A F+ +P ERN+V W +IGG+A G ++ AL F EM
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 505
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLG 362
S PN T+ C+L AC+ A+ G +I ++ L++ + ++ C++D+
Sbjct: 506 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQI-HAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G VD A + M + IS W +++ ++G+
Sbjct: 565 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR 599
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 14/337 (4%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G Y G D A + + + WN I + GR +AI+ + R G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
PD T L AC + + G HG + +GF+ NV +CN LV Y +C + A
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 167 VVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMF-----LTARREGVEPKDFM-ISS 217
++FD I + + +SW S++ +V++ +F + + E D + I +
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + + + VH A++ ++FVG+AL+D Y KCG +++A FN M ++
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMK 336
+V WNA++ GY+ G+ + A FE +MR E +P + VT V++ S+ G + +
Sbjct: 331 VVSWNAMVAGYSQSGNFEAA---FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+F M G P V+ G + EI
Sbjct: 388 LFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 423
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA L+ + FV DMYSK G D
Sbjct: 512 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 571
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD M +++ +W + ++ + GR A+D F +R+ G PD ITF L ACS
Sbjct: 572 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 631
Query: 124 CSLLQLG 130
C ++ G
Sbjct: 632 CGMVDQG 638
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 332/559 (59%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ + V++ Y K DA +FD MPERN+ +W A IS
Sbjct: 77 GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F+ + R+G EP+ TF L +C S LGRQ+H +++ ++ +V V
Sbjct: 137 RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYV 196
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K ++ A+ +F + +++ VS +++ Y Q +E ++F +REG+
Sbjct: 197 GSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +SVL+A + +A L+ G+ VH +++ V + + ++L+DMY KCG++ A
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARR 316
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + ER ++ WNA++ GY+ G L F M + P+ VT++ VLS CS
Sbjct: 317 IFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMID-ENKVKPDSVTVLAVLSGCSHG 375
Query: 329 GAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +KGM IFY MT K ++P ++HY CVVD+LGRAG V+ A+E +K+MP P+ ++WG
Sbjct: 376 GLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWG 435
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC V+ ++G L +++P ++GN+V+LSN++A+ GRWE+ +R M
Sbjct: 436 CLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKA 495
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SWI + +H F A D SH R E+ A + +L K AGY+PD + L+DV+
Sbjct: 496 VTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVD 555
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + HSEK+AL FGLIA P VPIR+ KNLRIC DCH+ K+ S I GREV +R
Sbjct: 556 EEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLR 615
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFHR G CSC DYW
Sbjct: 616 DKNRFHRIVGGKCSCGDYW 634
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ P + N +I + L +A +++ G + + + LN C
Sbjct: 20 RLLSTFPSNSHHVLNIHIHDTRLR-------EALLHMALRGLDTNFQDYNTVLNECLRKR 72
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++ G+++H ++++ + V + L+ FY KC+ + A+ VFD + ++N VSW +M+
Sbjct: 73 AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q +F+ R G EP +F ++VL++C +G LGR +H+ +K E
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEA 192
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+++VGS+L+DMY K G I +A F +PER++V AII GYA G + AL F +
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRL- 251
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R NYVT VL+A S A++ G ++ ++ L+ + ++D+ + G
Sbjct: 252 -QREGMQSNYVTYTSVLTALSGLAALDHGKQV-HNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ A I + R IS W A+L +G+
Sbjct: 310 NLTYARRIFDTLHERTVIS-WNAMLVGYSKHGE 341
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN+FTF + + V G+Q+H+ +K V+VG S DMY+K G
Sbjct: 150 MLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGK 209
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F +PER++ + A IS G + A++ F L+R G + + +T+ + L A
Sbjct: 210 IHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTA 269
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H L+RS V + N L+D Y KC + A+ +FD + ++ +SW
Sbjct: 270 LSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISW 329
Query: 181 CSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLE---LGRSVHA 236
+MLV Y ++ E ++F L V+P + +VLS C+ GLE +
Sbjct: 330 NAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH-GGLEDKGMDIFYDM 388
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ K V+ + +VDM G+ G ++ A KMP E + W ++G + + D
Sbjct: 389 TSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLD 448
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ ++ + E NYV L + ++ R
Sbjct: 449 IGEFVGHQLLQIEPENAGNYVILSNLYASAGR 480
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 333/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN F KA+ L + GK +H ++K+ + VG + DMY+K G
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGD 299
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ +P ++ W+ IS + + A + F+ + R+ P+ + L A
Sbjct: 300 IEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQA 359
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ + L+LG Q+H ++ G++ + V N L+D Y KC + + +F + D N+VSW
Sbjct: 360 CANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSW 419
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V Y Q+ E+ +F R + SSVL ACA + ++ +H++ K
Sbjct: 420 NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEK 479
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + V ++L+D Y KCG I+DA F + E ++V WN+II YA G A AL
Sbjct: 480 STFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALEL 539
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M +A N VT V +LS C G V +G+ +F SM + + IKP EHY C+V L
Sbjct: 540 FDRMNKSDIKA--NDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A + I ++P P+ VW ALL++C V+ LGR AA+ + ++P+D +
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTY 657
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+AA G +E L RK M++VG+KK AG SW+ +K +H F H I
Sbjct: 658 VLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIIN 717
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GY+PD N L+DV+EEEK + HSE++ALA+GL PPG PIRI
Sbjct: 718 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 777
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+ FK IS IV RE+IVRD NRFH F +G CSC DYW
Sbjct: 778 KNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 199/398 (50%), Gaps = 4/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++RE N F + K + P +HA A K G + FVG + D YS G
Sbjct: 139 LQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGA 198
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD + ++ TW A +S P+ A++ F +R TG +P+ + L A
Sbjct: 199 VCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKA 258
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S LG+ +HG V++ +D V L+D Y KC ++ A +F+ I + + W
Sbjct: 259 AVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILW 318
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q+ + E +MFL R V P +F +S VL ACA IA LELG +H +A+K
Sbjct: 319 SFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIK 378
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +FVG+AL+DMY KC +++++ F+ + + N V WN II GY G A+ ALS
Sbjct: 379 LGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSV 438
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + + VT VL AC+ +++ ++I +S+ K ++D
Sbjct: 439 FHEMRA--AHMLSTQVTFSSVLRACANTSSIKHAVQI-HSLIEKSTFNNDTIVCNSLIDT 495
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G + A ++ + + +S W ++++A ++G+
Sbjct: 496 YAKCGFIRDALKVFESIVECDVVS-WNSIISAYALHGR 532
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 171/364 (46%), Gaps = 6/364 (1%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +HA ++ G + D F + Y+K G A ++FD MPERN ++ +
Sbjct: 64 GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
L G + A++ F L+R G E + L L +H + G D N
Sbjct: 124 ALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V L+D Y C V A+ VFDGI+ K+ V+W +M+ Y +N E F R
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMT 243
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F+++S L A ++ LG+ +H +VK + VG AL+DMY KCG I+DA
Sbjct: 244 GFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDA 303
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F +P +++ W+ +I YA + A F M MR VPN +L VL AC+
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRM--MRSFVVPNEFSLSGVLQACA 361
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+E G +I +++ +K G + ++D+ + ++ + EI + +S W
Sbjct: 362 NIAFLELGEQI-HNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVS-W 419
Query: 387 GALL 390
++
Sbjct: 420 NTII 423
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/532 (41%), Positives = 322/532 (60%), Gaps = 10/532 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G +A ++F+E P R++ TW A +S V G A F + E + +++
Sbjct: 164 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSW 219
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A + C + R+L + NVS N ++ Y + ++ A+ FD +
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQ----NVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +SW +++ Y Q+ E +F+ +R+G +S LS CA IA LELG+ V
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VKA +E +VG+AL+ MY KCG+I DA I F + E+ +V WN +I GYA G
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL FE M + +P+ VT+V VLSACS G V+KG + FYSMT YGI ++HY
Sbjct: 396 KEALMLFESMK--KTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 453
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGRAG +D A ++K MP P + WGALL A R++G ELG AA +F+++P
Sbjct: 454 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 513
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SG +VLLSN++AA+GRW + +R M+D G+KK G SW+ V+N+IH F D+ H
Sbjct: 514 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 573
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I L +L +MK GY+ T L+DVEEEEK+ + +HSEK+A+AFG++AIP G
Sbjct: 574 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 633
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCH+A K IS IVGR +I+RD++RFH F G CSC DYW
Sbjct: 634 RPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 47/353 (13%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP--DLITFCAFLNACSDC 124
+FD+MPER++ +WNA +S G K A + F + P + I++ L A
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCKNSISWNGMLAAYVQN 105
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++ R+ L S D + N ++ Y K N + A+ +FD + ++++VSW +M+
Sbjct: 106 GRIEDARR----LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMI 161
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-------HAV 237
Y QN E ++F + V F ++++S + L+ R V ++V
Sbjct: 162 SGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV 217
Query: 238 AVKACVEG--------------------NIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+ A + G N+ + ++ Y + G I A F++MP+R+
Sbjct: 218 SWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRD 277
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ W AII GYA G+ + AL F EM R N T LS C+ A+E G ++
Sbjct: 278 SISWAAIIAGYAQSGYGEEALHLFVEMK--RDGERLNRSTFTSTLSTCAEIAALELGKQV 335
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ +K G++ G ++ + + G +D AY + + + + +S W ++
Sbjct: 336 -HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVS-WNTMI 386
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 58/305 (19%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V N ++ Y + V AK +FD + KN +SW ML YVQN E+ ++F +
Sbjct: 60 DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESK- 118
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
A EL + N +G Y K +
Sbjct: 119 ---------------------ADWEL------------ISWNCMMGG-----YVKRNRLV 140
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F++MPER+ V WN +I GYA G A FEE V + T ++S
Sbjct: 141 DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSG 194
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ G +++ ++F M K + + ++ + +D+A E+ + MP + +S
Sbjct: 195 YVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVS 248
Query: 385 VWGALLNACRVYGKPELGRIA-ADNLFKLDPN-DSGNHVLLSNMFAATGRWEEADLVRKE 442
W ++ G + G IA A N F P DS + + +A +G EEA + E
Sbjct: 249 SWNTMIT-----GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVE 303
Query: 443 MKDVG 447
MK G
Sbjct: 304 MKRDG 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ N TF + + GKQ+H +K+G +VG + MY K G
Sbjct: 304 MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 363
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F+ + E+ + +WN I+ G K A+ F ++++TG PD +T L+A
Sbjct: 364 IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 423
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + G N ++D G+ + A+ + + + +
Sbjct: 424 CSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAA 483
Query: 179 SWCSML 184
+W ++L
Sbjct: 484 TWGALL 489
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+++ A + F++MPER++V WNA++ GYA G+ A F+EM C+ N ++ +
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP---CK---NSISWNGM 98
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV-DLLGRAGLVDRAYEIIKEMPMR 380
L+A + G +E ++F S I + C++ + R LVD A I MP R
Sbjct: 99 LAAYVQNGRIEDARRLFESKADWELIS-----WNCMMGGYVKRNRLVD-ARGIFDRMPER 152
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
+S W +++ G+ + A LF+ P
Sbjct: 153 DEVS-WNTMISGYAQNGEL----LEAQRLFEESP 181
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 332/582 (57%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T +A++ G+ +H +K G V +YSK G D A
Sbjct: 208 VRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQ 267
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M +L +NA IS + G +++++ F L +G P+ T A + S
Sbjct: 268 FLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG 327
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L R LH F+V++ D + V L Y + N++ A+ +FD +++K SW +M+
Sbjct: 328 HELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMIS 387
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN E +F + V+P ISS LSACA + L LG+ VH + K +E
Sbjct: 388 GYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL 447
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++V +AL+DMY KCGSI +A F++M +N+V WNA+I GY G AL +++M
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDML 507
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R +P T + V+ ACS G V++G K+F MT +Y I PG EH C+VDLLGRAG
Sbjct: 508 DARI--LPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAG 565
Query: 366 LVDRAYEIIKEMPMRPT-ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
++ A E+I E P VWGALL AC V+ +L ++A+ LF+LD ++G +VLLS
Sbjct: 566 KLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLS 625
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++ + + EA +VR+E K + K GC+ I + +R H+F A D H ++ I + L
Sbjct: 626 NLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLE 685
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L +M AGY P T ALYDVEEEEK V HSEK+A+AFGL++ PG IRI KNLR
Sbjct: 686 RLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLR 745
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+A KFIS + R ++VRD +RFH F DG CSC DYW
Sbjct: 746 VCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 195/401 (48%), Gaps = 20/401 (4%)
Query: 7 SPNDFTFPCLFKASSALHI-------PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
SP+ F+F F A+S + LH L++ +G D FV + +Y K
Sbjct: 106 SPDSFSFA--FAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLS 163
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGG-EPDLITFCAF 117
DDA K+FD +P + W N +L G P A++AF+ + G PD T +
Sbjct: 164 RGDDARKVFDTVPSPDTILW-----NTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASS 218
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L A ++ S + +GR +HG+ V+ G + V GL+ Y KC ++ A+ +FD + + +
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V++ +++ Y N E+ ++F G P + +V+ + L R +HA
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VKA ++ + V +AL +Y + ++ A F+ M E+ + WNA+I GYA G +MA
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
++ F+ M + + PN +T+ LSAC+ GA+ G K + + K ++ +
Sbjct: 399 VALFQLMQELNVQ--PNPITISSTLSACAHLGALSLG-KWVHRIISKEKLELNVYVMTAL 455
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+D+ + G + A I M + +S W A+++ ++G+
Sbjct: 456 IDMYAKCGSIAEARSIFDRMDNKNVVS-WNAMISGYGLHGQ 495
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 341/587 (58%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN T +F A H GK +++L DV V SA +M+ GL
Sbjct: 198 MQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGL 257
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F++M +R++ TWN I+ V A+ F L++ G + + ITF LN
Sbjct: 258 LGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNV 317
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + L G+ +H + +G+D +V V L+ YG+C G A +F + K+ ++W
Sbjct: 318 YTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITW 377
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M V Y QN + Q+F + EG P + +VL CA +A L+ GR +H+ ++
Sbjct: 378 TVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIE 437
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +AL++MYGKCG + +A F KM +R+++ WN+++G YA G+ D L
Sbjct: 438 NGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQL 497
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M +A + V+ V VLSA S +G+V G + F +M + I P E Y CVVDL
Sbjct: 498 FNQMQLDGEKA--DAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDL 555
Query: 361 LGRAGLVDRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LGRAG + A +I+ ++ P +W LL ACR + K + + AA+ + + DP+ SG
Sbjct: 556 LGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGA 615
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V+LSN++AA G W+ + +RK M+ G+KK G S I + NR+H F D SH R I
Sbjct: 616 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPI 675
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L L EM+AAGYIPDT L+DVE+E K + +HSE++A+AFGL++ PPG P+R+
Sbjct: 676 YAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRV 735
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K+IS + GRE++VRD +RFH F DG CSC DYW
Sbjct: 736 IKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 191/398 (47%), Gaps = 6/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P T+ + A ++ G ++H L+ G DVFVG + +MY+K G
Sbjct: 97 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 156
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A F + R++ +W A I+ V + A + ++ G P+ IT NA
Sbjct: 157 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 216
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
D L G+ ++ + + +V V N ++ +G +G A+ +F+ ++D++ V+W
Sbjct: 217 YGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW 276
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ YVQN ++F +++G++ D +L+ + L G+ +H + +
Sbjct: 277 NIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + ++ V +AL+ +YG+C + A F M ++++ W + YA G AL
Sbjct: 337 AGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 396
Query: 301 FEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+E M+ E P TLV VL C+ A++KG +I +S ++ G + +++
Sbjct: 397 FQE---MQLEGRRPTSATLVAVLDTCAHLAALQKGRQI-HSHIIENGFRMEMVVETALIN 452
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G+ G + A + ++M R I VW ++L A +G
Sbjct: 453 MYGKCGKMAEARSVFEKMAKRD-ILVWNSMLGAYAQHG 489
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 25/354 (7%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+PD F A L CS + GR++H + GF+ N VC L+ Y +C V A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 168 VFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
VF+ I+++ DV +W M+ +Y Q + + MF + E V P ++L+ACA
Sbjct: 62 VFE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L+ G +H ++ EG++FVG+AL++MY KCGS++ A +F ++ R++V W A+I
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
H AL+ + VPN +TL V +A + +G K YS+
Sbjct: 181 ACVQ--HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG-KFIYSLVSSRV 237
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN----------ACRVY 396
++ +++ G AGL+ A + ++M R ++ W ++ A R++
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVT-WNIVITFYVQNENFGEAVRLF 296
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
G+ + I A+++ VL+ N++ + + ++ + +K+ G +
Sbjct: 297 GRLQQDGIKANDI---------TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 174/377 (46%), Gaps = 3/377 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ F L + S+ G+++H G + V MY++ G +A ++
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ + +++ W I G A+ F ++ P +T+ A LNAC+ L
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G ++HG +++ GF+G+V V L++ Y KC V A F + ++ VSW +M+
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
VQ+ + ++ + +GV P + +V +A L G+ ++++ +E ++
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDV 242
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++ ++M+G G + DA F M +R++V WN +I Y + A+ F +
Sbjct: 243 RVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD 302
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+A N +T V +L+ + ++ KG K+ + + + G ++ L GR
Sbjct: 303 GIKA--NDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359
Query: 368 DRAYEIIKEMPMRPTIS 384
+A++I +M + I+
Sbjct: 360 GQAWKIFVDMGSKDVIT 376
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/512 (43%), Positives = 308/512 (60%), Gaps = 33/512 (6%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G +P+ T + AC+ + L+ G+Q H ++++ GF+ +V V LV Y +C + A
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 166 KVVFDGIIDKND-------------------------------VSWCSMLVVYVQNYEEE 194
VFD + +++ VSW +++ Y QN +
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F R+ G++ F++ SVLSACA +A LELGR HA V++ +I VGSALV
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY K GS++DA F+KMP+RN V WN+II G A G + A+ FE+M ++ PN
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQM--LQAGIKPN 242
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
++ V VLSACS G V +G F MT YGI P HY C++DLLGRAG +D A I
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
MP+ P +SVWGALL ACR++G EL + A++L ++ +G +VLLSN++AA G+W+
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
+A VRK MKD G+ K G SWI VK +H F A +TSH + EI L L +MKAAG
Sbjct: 363 DAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAG 422
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y+P+ NF L DVE++EK + HHSEK+A+AFG+I PG IR+ KNLR+CGDCH+ K
Sbjct: 423 YVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIK 482
Query: 555 FISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
FIS R+++VRD NRFH F DG CSC DYW
Sbjct: 483 FISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 36/367 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FT + KA +++ GKQ H +K G DV V + MY++ G +DA
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 66 KMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN----- 94
+FD+M ER+ TWNA I+ AV+ G +N
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
+++ F +R+TG + D + L+AC+D + L+LGRQ H ++V+SGF ++ V + LVD
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y K + A VFD + +N+VSW S++ Q+ + +F + G++P +
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
VLSAC+ + GR + + + ++ + ++D+ G+ G + +AE N M
Sbjct: 246 FVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGM 305
Query: 274 P-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AG 329
P E ++ W A++G G+ ++A E + M + YV L + +A + A
Sbjct: 306 PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAA 365
Query: 330 AVEKGMK 336
V K MK
Sbjct: 366 KVRKLMK 372
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 41/246 (16%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+GV+P F +S+V+ ACA IA LE G+ H +K E ++ V +ALV MY +CGS++D
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 266 AEIAFNK-------------------------------MPERNLVCWNAIIGGYAHQGHA 294
A F+K M ER++V W A+I GYA G+
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 295 DMALSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
D +L+ F +M T M+ + + VLSAC+ A+E G + F++ ++ G
Sbjct: 124 DESLNVFNQMRKTGMK----SDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIV 178
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK- 411
+ +VD+ ++G ++ A ++ +MP R +S W +++ C +G+ + + + +
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVS-WNSIITGCAQHGRGNDAVLLFEQMLQA 237
Query: 412 -LDPND 416
+ PN+
Sbjct: 238 GIKPNE 243
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + + F + A + L G+Q HA ++SG D+ VG + DMY+K+G
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++FD+MP+RN +WN+ I+ GR +A+ F + + G +P+ I+F L+A
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L+ GR + ++ G +VS ++D G+ + A+ +G+ + DVS
Sbjct: 253 CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVS 312
Query: 180 -WCSML 184
W ++L
Sbjct: 313 VWGALL 318
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 348/606 (57%), Gaps = 25/606 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTGLKDDA 64
+ P+ T + A S L G+++H AL++G I + FVG + DMY
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSD 123
+FD + R +A WNA ++ A+ F+ + + P+ TF + L AC
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
C + +HG++V+ GF + V N L+D Y + V ++K +F + ++ VSW +M
Sbjct: 650 CKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTM 709
Query: 184 ---------------LVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARI 225
L+ +Q + E+G F+ +G +P + +VL CA +
Sbjct: 710 ITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAAL 769
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
A L G+ +HA AVK + ++ VGSALVDMY KCG + A F++MP RN++ WN +I
Sbjct: 770 AALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLI 829
Query: 286 GGYAHQGHADMALSSFEEMT----SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
Y G + AL F MT S R PN VT + + +ACS +G V++G+ +F++M
Sbjct: 830 MAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTM 889
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVYGKPE 400
+G++P +HYAC+VDLLGR+G V AYE+I MP + W +LL ACR++ E
Sbjct: 890 KASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVE 949
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
G IAA +LF L+PN + ++VL+SN++++ G W++A VRK+MK++G++K GCSWI
Sbjct: 950 FGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHG 1009
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
+ +H F + D SH ++ E+ L L + M+ GY+PD + L++V++EEK T + HSE
Sbjct: 1010 DEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSE 1069
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
++A+AFGL+ PPG IR+ KNLR+C DCH A K IS IV RE+I+RD RFH F +G C
Sbjct: 1070 RLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTC 1129
Query: 581 SCSDYW 586
SC DYW
Sbjct: 1130 SCGDYW 1135
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQI--HDVFVGCSAFDMYSKTGLKDDADK 66
++F FP + KA++A+H GKQ+HA K G V V S +MY K G A +
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-S 125
+FD++P+R+ +WN+ I+ + ++ F + +P T + +ACS
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSML 184
++LG+Q+H + +R+G D N LV Y + V AK +F G+ D D VSW +++
Sbjct: 449 GVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALF-GVFDGKDLVSWNTVI 506
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK-ACV 243
QN E +GV P ++SVL AC+++ L +GR +H A++ +
Sbjct: 507 SSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDL 566
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N FVG+ALVDMY C + + F+ + R + WNA++ GYA D AL F E
Sbjct: 567 IENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVE 626
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M S E PN T VL AC R I + +K G ++D+ R
Sbjct: 627 MIS-ESEFCPNATTFASVLPACVRCKVFSDKEGI-HGYIVKRGFGKDKYVQNALMDMYSR 684
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
G V+ + I M R +S W ++ C V G+
Sbjct: 685 MGRVEISKTIFGRMNKRDIVS-WNTMITGCIVCGR 718
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 200/419 (47%), Gaps = 22/419 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E + P FT + A S + V GKQ+HA L++G + + + MY++ G
Sbjct: 424 MLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR-TYTNNALVTMYARLG 482
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+DA +F ++L +WN IS+ R + A+ + G PD +T + L
Sbjct: 483 RVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLP 542
Query: 120 ACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
ACS L++GR++H + +R+G N V LVD Y C + ++VFDG++ +
Sbjct: 543 ACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAV 237
W ++L Y +N ++ ++F+ E P +SVL AC R +H
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY 662
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + +V +AL+DMY + G ++ ++ F +M +R++V WN +I G G D A
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 298 LSSFEEMTSMRCEA----------------VPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
L+ EM + E PN VTL+ VL C+ A+ KG +I ++
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEI-HAY 781
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+K + + +VD+ + G ++ A + +MP+R I+ W L+ A ++GK E
Sbjct: 782 AVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVIT-WNVLIMAYGMHGKGE 839
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 156/324 (48%), Gaps = 15/324 (4%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R+ + W + + ++AI + + PD F A L A + L LG+Q+
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 134 HGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
H + + G +V+V N LV+ YGKC ++ A+ VFD I D++ VSW SM+ +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVAVKACVEGNI--F 248
E E +F E V+P F + SV AC+ + G+ LG+ VHA ++ G++ +
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR---NGDLRTY 469
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+ALV MY + G + DA+ F ++LV WN +I + + AL M
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI--- 526
Query: 309 CEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG-IKPGAEHYACVVDLLGRAGL 366
+ V P+ VTL VL ACS+ + G +I + L+ G + + +VD+
Sbjct: 527 VDGVRPDGVTLASVLPACSQLERLRIGREI-HCYALRNGDLIENSFVGTALVDMYCNCKQ 585
Query: 367 VDRAYEIIKEMPMRPTISVWGALL 390
+ ++ + +R T++VW ALL
Sbjct: 586 PKKG-RLVFDGVVRRTVAVWNALL 608
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/613 (37%), Positives = 350/613 (57%), Gaps = 54/613 (8%)
Query: 25 IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+P T K++H A+++G DVFVG + D Y+K GL ++A K+F+ M +++ +WNA ++
Sbjct: 288 VPQT-KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 346
Query: 85 NAVLGGRPKNAIDAFINLRR-----------------------------------TGGEP 109
G + A + F N+R+ +G P
Sbjct: 347 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 406
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRS----------GFDGNVSVCNGLVDFYGKC 159
+ +T + L+AC+ G ++H + +++ G D ++ V N L+D Y KC
Sbjct: 407 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 466
Query: 160 NEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GVEPKDFMI 215
A+ +FD I ++N V+W M+ + Q + + ++F+ E GV P + I
Sbjct: 467 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 526
Query: 216 SSVLSACARIAGLELGRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S +L ACA +A + +G+ +HA ++ FV + L+DMY KCG + A F+ M
Sbjct: 527 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 586
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+++ + W +++ GY G AL F++M + VP+ +T + VL ACS G V++
Sbjct: 587 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDITFLVVLYACSHCGMVDQ 644
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G+ F SM+ YG+ P AEHYAC +DLL R+G +D+A+ +K+MPM PT VW ALL+AC
Sbjct: 645 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ EL A + L +++ + G++ L+SN++A GRW++ +R MK GIKK G
Sbjct: 705 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 764
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CSW+ + F D SH + +I A+L L + +KA GY+P+TNFAL+DV+EEEK
Sbjct: 765 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 824
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV E++VRD +RFH
Sbjct: 825 LLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 884
Query: 574 RFWDGYCSCSDYW 586
F +G CSC YW
Sbjct: 885 HFKNGSCSCGGYW 897
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 211/456 (46%), Gaps = 60/456 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ FT P + KA L G H L +G +VF+ + MYS+ G
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
++A +FDE+ +R ++ +WN+ +S V A+D F ++ + T D+
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 272
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC + +++HG +R+G +V V N L+D Y KC + A VF+
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---------------------- 209
+ K+ VSW +M+ Y Q+ E ++F R+E +
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 210 -------------PKDFMISSVLSACARIAGLELGRSVHAVAVKACV----------EGN 246
P I SVLSACA + G +HA ++K C+ + +
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +AL+DMY KC S + A F+ +P ERN+V W +IGG+A G ++ AL F EM
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 512
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLG 362
S PN T+ C+L AC+ A+ G +I ++ L++ + ++ C++D+
Sbjct: 513 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQI-HAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G VD A + M + IS W +++ ++G+
Sbjct: 572 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR 606
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 14/337 (4%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G Y G D A + + + WN I + GR +AI+ + R G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
PD T L AC + + G HG + +GF+ NV +CN LV Y +C + A
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 167 VVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMF-----LTARREGVEPKDFM-ISS 217
++FD I + + +SW S++ +V++ +F + + E D + I +
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + + + VH A++ ++FVG+AL+D Y KCG +++A FN M ++
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMK 336
+V WNA++ GY+ G+ + A FE +MR E +P + VT V++ S+ G + +
Sbjct: 338 VVSWNAMVAGYSQSGNFEAA---FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+F M G P V+ G + EI
Sbjct: 395 LFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 430
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA L+ + FV DMYSK G D
Sbjct: 519 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 578
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD M +++ +W + ++ + GR A+D F +R+ G PD ITF L ACS
Sbjct: 579 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 638
Query: 124 CSLLQLG 130
C ++ G
Sbjct: 639 CGMVDQG 645
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/656 (37%), Positives = 358/656 (54%), Gaps = 74/656 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGK--QLHALALKSGQIHDVFVGCSAFDMYSK- 57
M+ E P+DFT+ + A AL + + Q HA ALKSG + V + +YS+
Sbjct: 139 MKHEGFKPDDFTYASVL-AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRC 197
Query: 58 ---TGLKDDADKMFDEMPERNLATW--------------------------------NAY 82
L A K+FD++PE++ +W NA
Sbjct: 198 ASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAM 257
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
IS V G + A++ + +G E D T+ + + AC++ LLQLG+Q+H +++R
Sbjct: 258 ISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE- 316
Query: 143 DGNVSVCNGLVDFYGKCNE-------------------------------VGLAKVVFDG 171
D + N LV Y KC + +G AK++F
Sbjct: 317 DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ +KN +SW M+ +N E G ++F +REG EP D+ S + +CA + G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ HA VK + ++ G+AL+ MY KCG +++A+ F MP + V WNA+I
Sbjct: 437 QQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQH 496
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GH A+ +EEM ++ P+ +T + VL+ACS AG V++G K F SM Y I PGA
Sbjct: 497 GHGVEAVDVYEEM--LKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGA 554
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HYA ++DLL R+G A II+ +P +PT +W ALL+ CRV+G ELG IAAD LF
Sbjct: 555 DHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L P G ++LLSNM+AATG+WEE VRK M+D G+KK CSWI ++ ++H F DT
Sbjct: 615 LIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDT 674
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE-EKMTEVGHHSEKIALAFGLIA 530
SH + L L +EM+ GY+PDT+F L+DVE + K + HSEKIA+AFGL+
Sbjct: 675 SHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK 734
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+PPG IRI KNLR CGDCH+ F+F+S +V R++I+RD RFH F +G CSC ++W
Sbjct: 735 LPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 178/414 (42%), Gaps = 95/414 (22%)
Query: 64 ADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
A +F+E P R+ +NA I+ +AI+ F ++ G +PD T+ + L
Sbjct: 99 ARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGL 158
Query: 122 S-------DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE----VGLAKVVFD 170
+ C Q H ++SG SV N LV Y +C + A+ VFD
Sbjct: 159 ALVVDDEKQCV------QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFD 212
Query: 171 GIIDKNDVSWCSMLVVYVQN-----------YEEEN--------------GCQMFLTA-- 203
I +K++ SW +M+ YV+N +EN C ++ A
Sbjct: 213 DIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALE 272
Query: 204 --RR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
RR G+E +F SV+ ACA L+LG+ VHA ++ + + ++LV +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYY 331
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG +A F KMP ++LV WNA++ GY GH A F+EM N ++
Sbjct: 332 KCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE------KNILSW 385
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKP--------------------GAEHYA--- 355
+ ++S + G E+G+K+F M + G +P G + +A
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMK-REGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLV 444
Query: 356 ------------CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ + + G+V+ A ++ + MP ++S W AL+ A +G
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALIAALGQHG 497
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 148/361 (40%), Gaps = 84/361 (23%)
Query: 109 PDLIT-----FCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
PDL+ + A L C + LQL R +HG ++ GF + + N L+D Y K +E
Sbjct: 5 PDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSE 64
Query: 162 VGLAKVVFDGIID---------------------------------KNDVSWCSMLVVYV 188
+ A+ +FD I + ++ V + +M+ +
Sbjct: 65 LDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFS 124
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNI 247
N + + +F + EG +P DF +SVL+ A + E HA A+K+
Sbjct: 125 HNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVT 184
Query: 248 FVGSALVDMYGKCGS----IQDAEIAFNKMPERN-------------------------- 277
V +ALV +Y +C S + A F+ +PE++
Sbjct: 185 SVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKG 244
Query: 278 ------LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
LV +NA+I GY + G AL M S E + T V+ AC+ A +
Sbjct: 245 MDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIEL--DEFTYPSVIRACANARLL 302
Query: 332 EKGMKIFYSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G ++ ++ L+ + + H+ +V L + G + A I ++MP + +S W ALL
Sbjct: 303 QLGKQV-HAYVLRR--EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS-WNALL 358
Query: 391 N 391
+
Sbjct: 359 S 359
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/613 (38%), Positives = 342/613 (55%), Gaps = 37/613 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP L K+ + G+Q+H LK G D++V S MY + G +DA
Sbjct: 86 PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKV 145
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
KMFDE+P +++ +WNA IS G K A+
Sbjct: 146 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 205
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T + ++AC+ + ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 206 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 265
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F+G+ K+ +SW +++ Y + +F R G P D +
Sbjct: 266 IKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTML 325
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS---ALVDMYGKCGSIQDAEIAFNKM 273
S+L ACA + +E+GR +H V + ++G S +L+DMY KCG I+ A+ F+ +
Sbjct: 326 SILPACAHLGAIEIGRWIH-VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G ++
Sbjct: 385 LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE--PDDITFVGLLSACSHSGMLDL 442
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G IF SM Y I P EHY C++DLLG +GL A E+I M M P +W +LL AC
Sbjct: 443 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 502
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
+++G ELG A NL K++P + G++VLLSN++A GRW E +R + D G+KK G
Sbjct: 503 KMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG 562
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 563 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 622
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 623 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 682
Query: 574 RFWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 683 HFRDGVCSCNDYW 695
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 205/430 (47%), Gaps = 52/430 (12%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKMFDEMPERNLATWNAYISN 85
+ +HA +K+G +H+ S + D A +F+ + E NL WN
Sbjct: 4 RMIHAQMIKTG-LHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L P +A+ ++ + G P+ TF L +C+ + G+Q+HG +++ G+D +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 146 VSVCNGLVDFY---GKCNE----------------------------VGLAKVVFDGIID 174
+ V L+ Y G+ + + A+ +FD I
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW +M+ Y + + ++F + V P + + SV+SACA+ A +ELGR V
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ N+ + +AL+D+Y KCG ++ A F + ++++ WN +IGGY H
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPGAE 352
AL F+EM +R PN VT++ +L AC+ GA+E G + ++ + LK G+ +
Sbjct: 303 KEALLLFQEM--LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK-GVANASS 359
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF-- 410
H ++D+ + G ++ A ++ + R ++S W A++ ++G+ AA ++F
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSILNR-SLSSWNAMIFGFAMHGRAN----AAFDIFSR 414
Query: 411 ----KLDPND 416
+++P+D
Sbjct: 415 MRKNEIEPDD 424
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+Y K G
Sbjct: 211 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 270
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 330
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ +++GR +H ++ + G S L+D Y KC ++ A+ VFD I++++
Sbjct: 331 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 390
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + +F R+ +EP D +LSAC+ L+LGR + ++
Sbjct: 391 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ G+ ++
Sbjct: 451 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 510
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
S + + + + +YV L + + R V K
Sbjct: 511 GESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 547
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 329/563 (58%), Gaps = 34/563 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G+ ++A ++FD+MP RN +W I+ GR + A+ L R+G P L +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ ACS+ L+ G Q+H V+ G N CN L+ YGKC + A+ VF ++
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482
Query: 175 KNDVSWCSMLVVYVQN-----------------------------YEEENGCQM--FLTA 203
K+ VSW S L VQN + E++ M F T
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
E P +++ +L C + ++G+ +H VA+K ++ + V +AL+ MY KCG
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
D+ F+ M ER++ WN II GYA G A+ ++ M S +PN VT V +L+
Sbjct: 602 ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES--AGVLPNEVTFVGLLN 659
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS AG V++G K F SM+ YG+ P EHYAC+VDLLGR G V A + I +MP+ P
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W ALL AC+++ E+G+ AA+ LF+++P+++GN+V+LSN++++ G W E VRK M
Sbjct: 720 VIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIM 779
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K G+ K GCSW +K+++H F D HE+ EI A L +L +KA GY+PDT F L
Sbjct: 780 KQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EE+K + + +HSEK+A+A+ L+A P G+PI+I KNLRICGDCH+ KF+S + R+
Sbjct: 840 HDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQ 899
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
+ +RD NRFH F +G CSC D+W
Sbjct: 900 IDIRDGNRFHHFRNGSCSCEDFW 922
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 193/440 (43%), Gaps = 54/440 (12%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TG 59
M RE + P+ F A L + L LALK+G DV +G + ++YS+ T
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ D A K F+ M ERN TW+ I+ GGR IDA I + + A +
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGR----IDAAIAVYERDPVKSIACRTALIT 330
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ C + R L + V N L+ Y + V AK +FD + +N +S
Sbjct: 331 GLAQCGRIDDAR----ILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W M+ Y QN E + R G+ P ++S+ AC+ I LE G VH++AV
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA---------------- 283
K + N F +AL+ MYGKC +++ A F++M +++V WN+
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506
Query: 284 ---------------IIGGYAHQGHADMALSSFEEMTSMRCE-AVPNYVTLVCVLSACSR 327
II YAH ++ A+ +F+ +M CE +PN L +L C
Sbjct: 507 TFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK---TMFCEHELPNSPILTILLGVCGS 563
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD--RAYEIIKEMPMRPTISV 385
GA + G +I +++ +K G+ ++ + + G D R +++++E I
Sbjct: 564 LGASKIGQQI-HTVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEERD----IFT 618
Query: 386 WGALLNACRVYGKPELGRIA 405
W ++ Y + LGR A
Sbjct: 619 WNTIITG---YAQHGLGREA 635
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 170/382 (44%), Gaps = 45/382 (11%)
Query: 48 GCSA-FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
GCSA + G +A ++FD MP R++ WN+ IS G P A D + + +G
Sbjct: 36 GCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI--SG 93
Query: 107 GEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGF-----------DGNVSVCNGLVD 154
G ++ T L+ +L+ R G L R+ +G++++ L D
Sbjct: 94 G--NMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151
Query: 155 -------------FYGKCNEVGL--AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
G C+ + + A+ +F+ + ++N VSW M+ Y + +
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F REG+ P +S LSA + L++ S+ +A+K E ++ +G+A++++Y +
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271
Query: 260 CGSIQDAEIA-FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
S+ D I F M ERN W+ +I +H G D A++ +E + V +
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER------DPVKSIACR 325
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+++ ++ G ++ +F + +P + ++ + G+V+ A E+ +MP
Sbjct: 326 TALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMP 380
Query: 379 MRPTISVWGALLNACRVYGKPE 400
R TIS W ++ G+ E
Sbjct: 381 FRNTIS-WAGMIAGYAQNGRSE 401
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN L +L G+Q+H +A+K G ++ V + MY K G D + ++
Sbjct: 549 PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRI 607
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M ER++ TWN I+ G + AI + ++ G P+ +TF LNACS L+
Sbjct: 608 FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLV 667
Query: 128 QLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV-GLAKVVFDGIIDKNDVSWCSML 184
G + + + G +VD G+ +V G + ++D I+ + V W ++L
Sbjct: 668 DEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R HG L SG C+ + G+ VG A+ VFD + ++ ++W SM+ Y N
Sbjct: 26 RHAHGELEVSG-------CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGRSVHAVAV-KACVEGNIF 248
+ ++ + + + ++L ++G LGR + A V +E N
Sbjct: 79 GMPDAARDLY-----DAISGGNMRTGAIL-----LSGYGRLGRVLEARRVFDGMLERNTV 128
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+A++ Y + G I A F+ MP R++ WN+++ GY H A + FE+M
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE-- 186
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
N V+ ++S R K IF M + G+ P ++A + + G +D
Sbjct: 187 ----RNLVSWTVMISGYGRIENHGKAWDIFCKMH-REGLLPDQSNFASALSAVKGLGNLD 241
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 329/563 (58%), Gaps = 34/563 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G+ ++A ++FD+MP RN +W I+ GR + A+ L R+G P L +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ ACS+ L+ G Q+H V+ G N CN L+ YGKC + A+ VF ++
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482
Query: 175 KNDVSWCSMLVVYVQN-----------------------------YEEENGCQM--FLTA 203
K+ VSW S L VQN + E++ M F T
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
E P +++ +L C + ++G+ +H VA+K ++ + V +AL+ MY KCG
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
D+ F+ M ER++ WN II GYA G A+ ++ M S +PN VT V +L+
Sbjct: 602 ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES--AGVLPNEVTFVGLLN 659
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS AG V++G K F SM+ YG+ P EHYAC+VDLLGR G V A + I +MP+ P
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W ALL AC+++ E+G+ AA+ LF+++P+++GN+V+LSN++++ G W E VRK M
Sbjct: 720 VIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIM 779
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K G+ K GCSW +K+++H F D HE+ EI A L +L +KA GY+PDT F L
Sbjct: 780 KQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EE+K + + +HSEK+A+A+ L+A P G+PI+I KNLRICGDCH+ KF+S + R+
Sbjct: 840 HDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQ 899
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
+ +RD NRFH F +G CSC D+W
Sbjct: 900 IDIRDGNRFHHFRNGSCSCEDFW 922
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 193/440 (43%), Gaps = 54/440 (12%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TG 59
M RE + P+ F A L + L LALK+G DV +G + ++YS+ T
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ D A K F+ M ERN TW+ I+ GGR IDA I + + A +
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGR----IDAAIAVYERDPVKSIACRTALIT 330
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ C + R L + V N L+ Y + V AK +FD + +N +S
Sbjct: 331 GLAQCGRIDDAR----ILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W M+ Y QN E + R G+ P ++S+ AC+ I LE G VH++AV
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA---------------- 283
K + N F +AL+ MYGKC +++ A F++M +++V WN+
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506
Query: 284 ---------------IIGGYAHQGHADMALSSFEEMTSMRCE-AVPNYVTLVCVLSACSR 327
II YAH ++ A+ +F+ +M CE +PN L +L C
Sbjct: 507 TFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK---TMFCEHELPNSPILTILLGVCGS 563
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD--RAYEIIKEMPMRPTISV 385
GA + G +I +++ +K G+ ++ + + G D R +++++E I
Sbjct: 564 LGASKIGQQI-HTVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEERD----IFT 618
Query: 386 WGALLNACRVYGKPELGRIA 405
W ++ Y + LGR A
Sbjct: 619 WNTIITG---YAQHGLGREA 635
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 170/382 (44%), Gaps = 45/382 (11%)
Query: 48 GCSA-FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
GCSA + G +A ++FD MP R++ WN+ IS G P A D + + +G
Sbjct: 36 GCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI--SG 93
Query: 107 GEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGF-----------DGNVSVCNGLVD 154
G ++ T L+ +L+ R G L R+ +G++++ L D
Sbjct: 94 G--NMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151
Query: 155 -------------FYGKCNEVGL--AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
G C+ + + A+ +F+ + ++N VSW M+ Y + +
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F REG+ P +S LSA + L++ S+ +A+K E ++ +G+A++++Y +
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271
Query: 260 CGSIQDAEIA-FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
S+ D I F M ERN W+ +I +H G D A++ +E + V +
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER------DPVKSIACR 325
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+++ ++ G ++ +F + +P + ++ + G+V+ A E+ +MP
Sbjct: 326 TALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMP 380
Query: 379 MRPTISVWGALLNACRVYGKPE 400
R TIS W ++ G+ E
Sbjct: 381 FRNTIS-WAGMIAGYAQNGRSE 401
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN L +L G+Q+H +A+K G ++ V + MY K G D + ++
Sbjct: 549 PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRI 607
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M ER++ TWN I+ G + AI + ++ G P+ +TF LNACS L+
Sbjct: 608 FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLV 667
Query: 128 QLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV-GLAKVVFDGIIDKNDVSWCSML 184
G + + + G +VD G+ +V G + ++D I+ + V W ++L
Sbjct: 668 DEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R HG L SG C+ + G+ VG A+ VFD + ++ ++W SM+ Y N
Sbjct: 26 RHAHGELEVSG-------CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGRSVHAVAV-KACVEGNIF 248
+ ++ + + + ++L ++G LGR + A V +E N
Sbjct: 79 GMPDAARDLY-----DAISGGNMRTGAIL-----LSGYGRLGRVLEARRVFDGMLERNTV 128
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+A++ Y + G I A F+ MP R++ WN+++ GY H A + FE+M
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE-- 186
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
N V+ ++S R K IF M + G+ P ++A + + G +D
Sbjct: 187 ----RNLVSWTVMISGYGRIENHGKAWDIFCKMH-REGLLPDQSNFASALSAVKGLGNLD 241
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/612 (38%), Positives = 337/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK- 66
PN +TFP L K+ + G+Q+H LK G D++V S MY++ G +DA K
Sbjct: 64 PNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKV 123
Query: 67 ------------------------------MFDEMPERNLATWNAYISNAVLGGRPKNAI 96
MFDE+P +++ +WNA IS G K A+
Sbjct: 124 FDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEAL 183
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T L+AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 184 ELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLY 243
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC +V A +F+G+ K+ VSW +++ Y + +F R G P D I
Sbjct: 244 SKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIV 303
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K V + ++L+DMY KCG I+ A FN M
Sbjct: 304 SILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSML 363
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G+A G A+ F M E P+ +T V +LSACS +G ++ G
Sbjct: 364 HKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE--PDDITFVGLLSACSHSGKLDLG 421
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF SMT Y I P EHY C++DLLG +GL A E+IK MPM P +W +LL ACR
Sbjct: 422 RHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACR 481
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+G EL A NL K++P + G++VLLSN++A G W+E VR + G+KK GC
Sbjct: 482 RHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGC 541
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 542 SSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGA 601
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K +S I RE+I RD RFH
Sbjct: 602 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHH 661
Query: 575 FWDGYCSCSDYW 586
F DG CSC+D+W
Sbjct: 662 FRDGVCSCNDFW 673
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 181/388 (46%), Gaps = 39/388 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F + E N WN + L P +A+ ++ + G P+ TF L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK------------------------- 158
+ G+Q+HG +++ G++ ++ V L+ Y +
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 159 ------CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+ A+ +FD I K+ VSW +M+ Y + + ++F + V P +
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +VLSACA+ +ELGR VH+ N+ + +AL+D+Y KCG ++ A F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +++V WN +IGGY H AL F+EM +R PN VT+V +L AC+ GA++
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM--LRSGESPNDVTIVSILPACAHLGAID 316
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK + ++D+ + G ++ A+++ M + ++S W A++
Sbjct: 317 IGRWIHVYIDKKLK-DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 374
Query: 391 NACRVYGKPELGRIAADNLFK--LDPND 416
++G+ G + K ++P+D
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDD 402
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 154/337 (45%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308
Query: 121 CSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + D S+ L+D Y KC ++ A VF+ ++ K+
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 368
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + G +F R+ G+EP D +LSAC+ L+LGR + ++
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSM 428
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++A+ MP E + V W +++ G+ ++
Sbjct: 429 TQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLEL 488
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
A S + + E +YV L + + V K
Sbjct: 489 AESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAK 525
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/577 (38%), Positives = 335/577 (58%), Gaps = 6/577 (1%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
DF LFK + I KQ+HA +G IHD+ V M +K A +F+
Sbjct: 4 DFFISTLFKCRNIFQI----KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFN 59
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+M ER+ +W+ I V G + F L R G +PD + + AC D L +
Sbjct: 60 KMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIM 119
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
GR +H ++++G + VC+ LVD Y KC + AK +FD + K+ V+ M+ Y +
Sbjct: 120 GRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAE 179
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ +F RR+G P + ++++ACA++ + R VH ++ +
Sbjct: 180 CGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVEL 239
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+A++DMY KCGSI + F++M ++N++ W+A+IG Y + G AL F M +
Sbjct: 240 GTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMM--LNS 297
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+PN +T + +L ACS AG V+ G+++F M++ YG++P +HY C+VDLLGRAG +D+
Sbjct: 298 GIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQ 357
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A +I+ M + +W A L ACR++ + +L AA L L + G+++LLSN++A
Sbjct: 358 ALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYAN 417
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
GRW++ +R M +KK G +WI V N I+ F A D SH R+ EI ML L ++
Sbjct: 418 AGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQK 477
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+++AGY+PDTN L+DV+EE K+ + HSEK+A+AFGLIA P G PIRITKNLR+CGDC
Sbjct: 478 LESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDC 537
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
HS K +S I R++IVRD NRFH F +G CSC DYW
Sbjct: 538 HSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 161/339 (47%), Gaps = 2/339 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++F+ P + KA + G+ +H+ LK+G D FV + DMY+K G+ D+A ++
Sbjct: 99 PDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQL 158
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP+++L T I+ G+P + F +RR G PD + +NAC+ +
Sbjct: 159 FDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAM 218
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
R +H ++ + +V + ++D Y KC + ++ +FD + KN +SW +M+ Y
Sbjct: 219 NKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAY 278
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV-AVKACVEGN 246
+ + ++F G+ P S+L AC+ ++ G + ++ +V V +
Sbjct: 279 GYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPD 338
Query: 247 IFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +VD+ G+ G + A + N E++ W A +G D+A + + +
Sbjct: 339 VKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLL 398
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
S++ + +Y+ L + + R V K + LK
Sbjct: 399 SLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLK 437
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ P+ + A + L + +H DV +G + DMY+K G
Sbjct: 193 MRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGS 252
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D + ++FD M ++N+ +W+A I G+ + A++ F + +G P+ ITF + L A
Sbjct: 253 IDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYA 312
Query: 121 CSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G QL + V G +V +VD G+ + A + + + ++K++
Sbjct: 313 CSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEG 372
Query: 179 SWCSML---VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
WC+ L ++ Q E ++ L+ + + P +++ S + A A
Sbjct: 373 IWCAFLGACRIHRQVDLAEKAAKLLLSLQTQ--NPGHYILLSNIYANA 418
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 343/586 (58%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN FT+PC+ + + G+Q+H+L++K+G D++V DMYSK G
Sbjct: 337 MQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGC 396
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+ + + +R++ +W + I+ V + A+ F ++ G PD I + +A
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++ G Q+H + SG+ ++S+ N LV+ Y +C A +F I K++++W
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITW 516
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ + +F+ + G + F S +SA A +A ++ G+ VH AVK
Sbjct: 517 NGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK 576
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V +AL+ +YGKCGSI+DA++ F++M RN V WN II + G AL
Sbjct: 577 TGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDL 636
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + PN VT + VL+ACS G VE+G+ F SM+ YG+ P +HYACVVD+
Sbjct: 637 FDQMKQEGLK--PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDI 694
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +DRA + EMP+ +W LL+AC+V+ E+G +AA +L +L+P+DS ++
Sbjct: 695 LGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASY 754
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN +A TG+W D VRK MKD GI+K G SWI VKN +H F D H + +I
Sbjct: 755 VLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIY 814
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L++L + + GY + ++ E+E+K HSEK+A+AFGL+ +PP +P+R+
Sbjct: 815 KFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVI 874
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHS K S + RE+++RD RFH F G CSC DYW
Sbjct: 875 KNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 193/412 (46%), Gaps = 7/412 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P + + A + + G+ +HA K + FVG + +Y G
Sbjct: 135 MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGS 194
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +M + T+N IS G + A+ F ++ +G PD +T + L A
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAA 254
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQ G+QLH +L+++G + L+D Y KC ++ A +F+ N V W
Sbjct: 255 CASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q + ++F + G+ P F +L C +ELG +H++++K
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +++V L+DMY K G + A + +R++V W ++I GY + AL++
Sbjct: 375 NGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALAT 434
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM C P+ + L SAC+ A+ +G++I ++ G + +V+L
Sbjct: 435 FKEMQD--CGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNL 491
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
R G + A+ + +E+ + I+ W L++ +G+ L + A K+
Sbjct: 492 YARCGRSEEAFSLFREIEHKDEIT-WNGLISG---FGQSRLYKQALMVFMKM 539
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 197/422 (46%), Gaps = 14/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ T L A +++ GKQLH+ LK+G D S D+Y K G
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGD 295
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ N+ WN + + + F ++ TG P+ T+ L
Sbjct: 296 IETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRT 355
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++LG Q+H +++GF+ ++ V L+D Y K + A+ + + + ++ VSW
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSW 415
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ E F + GV P + ++S SACA I + G +HA
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I + + LV++Y +CG ++A F ++ ++ + WN +I G+ AL
Sbjct: 476 SGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMV 535
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + A N T + +SA + +++G ++ + +K G E ++ L
Sbjct: 536 FMKMG--QAGAKYNVFTFISAISALANLADIKQGKQV-HGRAVKTGHTSETEVANALISL 592
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------LDP 414
G+ G ++ A I EM +R +S W ++ +C +G+ + A +LF L P
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRG----LEALDLFDQMKQEGLKP 647
Query: 415 ND 416
ND
Sbjct: 648 ND 649
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 178/361 (49%), Gaps = 6/361 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++HA ++ G D +G D+Y+K GL A ++F E+ R+ +W A +S G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
K A + + T P + L+AC+ L GR +H + + F V N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y LA+ VF ++ + V++ +++ + Q E Q+F + G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
++S+L+ACA + L+ G+ +H+ +KA + + +L+D+Y KCG I+ A F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
N N+V WN ++ Y +D+A SFE M+ + PN T C+L C+ G
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQI--SDLA-KSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E G +I +S+++K G + ++D+ + G +D+A +I++ + R +S W ++
Sbjct: 361 QIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVS-WTSM 418
Query: 390 L 390
+
Sbjct: 419 I 419
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/581 (40%), Positives = 328/581 (56%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+SP+ T K+ S + G+ + A A K G + D FV S MY+ G A
Sbjct: 167 VSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAH 226
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F + + + WNA I+ V G K ++ F + D +T + AC
Sbjct: 227 VLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLG 286
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LG+ + + G + ++ LVD Y KC E+ A+ +FD + ++ V+W +M+
Sbjct: 287 DANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMIS 346
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q+ +F + V P D + SVLSACA + LE G+ VH+ + +
Sbjct: 347 GYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPL 406
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +G+ALVD Y KCG I+DA AF MP RN W A+I G A G + AL F M
Sbjct: 407 TVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSML 466
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
E P VT + VL ACS VE+G + F SMT YGI P EHY C+VDLLGRAG
Sbjct: 467 EANIE--PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAG 524
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+D AY+ I+ MP+ P VW ALL+AC V+ E+G A + LDP SGN++LLSN
Sbjct: 525 LIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSN 584
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+A+ G+W+ A +VRKEMK+ G++K GCS I ++ I F A+D+ H + TEI + +
Sbjct: 585 TYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHE 644
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ E +K GYIP+T A DV+E EK V HHSEK+A+AFGL+ PG IR++KNLR+
Sbjct: 645 MIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRV 704
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHSA K IS + RE+IVRD NRFH F DG CSC+DYW
Sbjct: 705 CIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 178/378 (47%), Gaps = 14/378 (3%)
Query: 31 QLHALALKSGQI-------HDVFVGCSAFDMYSKTGLKDDADKMFD--EMPERNLATWNA 81
QLHA LKSG + H + + + + A ++F P R+ ++N
Sbjct: 81 QLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSARSYNI 140
Query: 82 YISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS 140
I + + G P++A+ F+ L T PD T + +CS L +GR + + +
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
GF + V N L+ Y C +V A V+F + K ++W +M+ YV+N + + +MF
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ + SV +AC R+ LG+ + A + + + + +ALVDMY KC
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F++M R++V W+A+I GY AL+ F EM E PN VT+V
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQG--TEVNPNDVTMVS 378
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VLSAC+ GA+E G K +S + + +VD + G + A + + MP+R
Sbjct: 379 VLSACAVLGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437
Query: 381 PTISVWGALLNACRVYGK 398
T + W AL+ G+
Sbjct: 438 NTWT-WTALIKGMASNGR 454
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/613 (38%), Positives = 341/613 (55%), Gaps = 37/613 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP L K+ + G+Q+H LK G D++V S MY + G +DA
Sbjct: 101 PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKV 160
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
KMFDE+P +++ +WNA IS G K A+
Sbjct: 161 FDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEAL 220
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T + ++AC+ + ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 221 ELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F+G+ K+ +SW +++ Y + +F R G P D +
Sbjct: 281 IKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTML 340
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS---ALVDMYGKCGSIQDAEIAFNKM 273
S+L ACA + +E+GR +H V + ++G S +L+DMY KCG I+ A+ F+ +
Sbjct: 341 SILPACAHLGAIEIGRWIH-VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 399
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G ++
Sbjct: 400 LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE--PDDITFVGLLSACSHSGMLDL 457
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G IF SM Y I P EHY C++DLLG +GL A E+I M M P +W +LL AC
Sbjct: 458 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 517
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
++Y ELG A NL K++P + G++VLLSN++A GRW E +R + D G+KK G
Sbjct: 518 KMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG 577
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 578 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 574 RFWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 698 HFRDGVCSCNDYW 710
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 205/430 (47%), Gaps = 52/430 (12%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKMFDEMPERNLATWNAYISN 85
+ +HA +K+G +H+ S + D A +F+ + E NL WN
Sbjct: 19 RMIHAQMIKTG-LHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 77
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L P +A+ ++ + G P+ TF L +C+ + G+Q+HG +++ G+D +
Sbjct: 78 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 137
Query: 146 VSVCNGLVDFY---GKCNE----------------------------VGLAKVVFDGIID 174
+ V L+ Y G+ + + A+ +FD I
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 197
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW +M+ Y + + ++F + V P + + SV+SACA+ A +ELGR V
Sbjct: 198 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 257
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ N+ + +AL+D+Y KCG ++ A F + ++++ WN +IGGY H
Sbjct: 258 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 317
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPGAE 352
AL F+EM +R PN VT++ +L AC+ GA+E G + ++ + LK G+ +
Sbjct: 318 KEALLLFQEM--LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK-GVANASS 374
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF-- 410
H ++D+ + G ++ A ++ + R ++S W A++ ++G+ AA ++F
Sbjct: 375 HRTSLIDMYAKCGDIEAAQQVFDSILNR-SLSSWNAMIFGFAMHGRAN----AAFDIFSR 429
Query: 411 ----KLDPND 416
+++P+D
Sbjct: 430 MRKNEIEPDD 439
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+Y K G
Sbjct: 226 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 345
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ +++GR +H ++ + G S L+D Y KC ++ A+ VFD I++++
Sbjct: 346 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 405
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + +F R+ +EP D +LSAC+ L+LGR + ++
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ + ++
Sbjct: 466 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVEL 525
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
S + + + + +YV L + + R V K
Sbjct: 526 GESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 562
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 138/305 (45%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIID 174
L+ +C LQ R +H ++++G + L++F + + A VF+ I +
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +M + + + + +++ G+ P + +L +CA+ G+ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K + +++V ++L+ MY + G ++DA F++ R++V + A+I GYA +G+
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185
Query: 295 DMALSSFEEM-----------------------------TSMRCEAVPNYVTLVCVLSAC 325
A F+E+ M+ P+ T+V V+SAC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++ ++E G ++ +S +G + ++DL + G V+ A + + + + IS
Sbjct: 246 AQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS- 303
Query: 386 WGALL 390
W L+
Sbjct: 304 WNTLI 308
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 337/587 (57%), Gaps = 38/587 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E D+T + A S L GKQ+H + + VFV + +MY+K G
Sbjct: 146 MQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGA 205
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD M +N+ +WN+ IS + G+P+ F ++ +G PD +T L+A
Sbjct: 206 LDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA 265
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
Y +C + A F I +K+ V W
Sbjct: 266 -----------------------------------YFQCGYIDEACKTFREIKEKDKVCW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V QN +EE+ +F E V P +F ISSV+S+CAR+A L G++VH AV
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVI 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V+ ++ V SALVDMY KCG DA I F +M RN++ WN++I GYA G AL+
Sbjct: 351 FGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALAL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+EEM + P+ +T V VLSAC AG VE+G FYS++ +G+ P +HY+C+++L
Sbjct: 411 YEEMLHENLK--PDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINL 468
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D+A ++IK M P +W LL+ CR+ G +AA +LF+LDP+++G +
Sbjct: 469 LGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPY 528
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
++LSN++AA GRW++ VR MK+ IKK A SWI + N++H F A+D +H +I
Sbjct: 529 IMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIY 588
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG-VPIRI 539
L +L ++++ +G+ PDTN L+DV EEEK + +HSEK+ALAF LI P G PIRI
Sbjct: 589 EELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRI 648
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+R+CGDCH KF+S I+ R +I+RD NRFH F +G CSC D W
Sbjct: 649 MKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 58/405 (14%)
Query: 4 ECISPNDFTFPCLFKASSALHIP------VTGKQLHALALKSGQI------------HDV 45
+C+ ND + LH+ + + LH A KSG + DV
Sbjct: 31 QCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYA-KSGNLSDARDLFDKMSRRDV 89
Query: 46 FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT 105
F + YSK+G +D +FD+M + ++N I+ G A++ F+ ++
Sbjct: 90 FSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEE 149
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G E T + L+ACS ++ G+Q+HG +V + +V V N L + Y KC + A
Sbjct: 150 GFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQA 209
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ +FD +++KN VSW SM+ Y+QN + E ++F + G+ P IS++LSA
Sbjct: 210 RWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA---- 265
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
Y +CG I +A F ++ E++ VCW ++
Sbjct: 266 -------------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMM 294
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
G A G + AL F EM + P+ T+ V+S+C+R ++ +G + + + +
Sbjct: 295 VGCAQNGKEEDALLLFREM--LLENVRPDNFTISSVVSSCARLASLCQGQAV-HGKAVIF 351
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G+ + +VD+ + G A+ + K M R IS W +++
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVIS-WNSMI 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++F +A++ Y K G+++D F++M + V +N +I G++ G + AL F M
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
E+ T V VL ACS+ +++G +I + + + + + ++ + G
Sbjct: 148 EEGFESTD--YTHVSVLHACSQLLDIKRGKQI-HGRIVATSLGESVFVWNALTNMYAKCG 204
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+D+A + M + +S W ++++ G+PE
Sbjct: 205 ALDQARWLFDRMVNKNVVS-WNSMISGYLQNGQPE 238
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/609 (37%), Positives = 346/609 (56%), Gaps = 37/609 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA- 64
+SPN +TFP LFK+ + GKQ+HA LK G D+ V S MY++ G+ +DA
Sbjct: 74 LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAH 133
Query: 65 ------------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKN 94
KMFDE+P +++ +WNA IS GR K
Sbjct: 134 KVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKE 193
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F + + +PD T L+ C+ ++LGRQ+H ++ GF N+ + N L+D
Sbjct: 194 ALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC E+ A +F+G+ K+ +SW +++ Y + +F + G P D
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ S+L ACA + +++GR +H K + N + ++L+DMY KCG+I+ A F+
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAV 331
+ ++L NA+I G+A G AD A F+ ++ M+ + + P+ +T V +LSACS AG
Sbjct: 374 ILNKSLSSCNAMIFGFAMHGRADAA---FDLLSRMKKDGIEPDDITFVGLLSACSHAGLS 430
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G KIF SMTL Y I+P EHY C++DLLGR+GL A E+I M M P +WG+LL
Sbjct: 431 DLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLK 490
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
AC+++ ELG + A L K++P + G++VLLSN++A + RW++ VR + D G+KK
Sbjct: 491 ACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKV 550
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
GCS I + + +H F D H +N EI ML ++ + G++ DT+ L ++EEE K
Sbjct: 551 PGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELK 610
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ +HSEK+A+AFGLI+ PG +RI KNLR+C +CH A K IS I RE+I RD +R
Sbjct: 611 EGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSR 670
Query: 572 FHRFWDGYC 580
FH F DG C
Sbjct: 671 FHHFKDGMC 679
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 193/423 (45%), Gaps = 49/423 (11%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F + E N +WN I L P +A++ ++ + G P+ TF +C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------------- 170
Q G+Q+H +++ G ++ V L+ Y + V A VFD
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 171 -------GIIDKND-----------VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
G +DK VSW +M+ Y + + ++F + V+P +
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+++VLS C +ELGR +H+ N+ + +AL+D+Y KCG ++ A F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGYA+ H AL F+EM ++ PN VT++ +L AC+ GA++
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEM--LKLGETPNDVTMLSILPACAHLGAID 328
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK GI ++D+ + G ++ A ++ + + ++S A++
Sbjct: 329 IGRWIHVYIDKKLK-GIITNTSLQTSLIDMYAKCGNIEAANQVFDTI-LNKSLSSCNAMI 386
Query: 391 NACRVYGKPE-----LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
++G+ + L R+ D ++P+D + + +A +DL RK K
Sbjct: 387 FGFAMHGRADAAFDLLSRMKKDG---IEPDD----ITFVGLLSACSHAGLSDLGRKIFKS 439
Query: 446 VGI 448
+ +
Sbjct: 440 MTL 442
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/586 (39%), Positives = 334/586 (56%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P TF L + + + G +H + SG D F+ +MY + G D A K
Sbjct: 75 NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARK 134
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS---- 122
+FDE ER + WNA + G K +D ++ + G D T+ L AC
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL 194
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
S LQ G+++H ++R G++ N+ V L+D Y K V A VF + KN VSW +
Sbjct: 195 SVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + +N ++F E + P + +VL ACA +A LE G+ +H ++
Sbjct: 255 MIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILR 314
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V +AL+ MYG+CG I + F+ M R++V WN++I Y G A+
Sbjct: 315 RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQI 374
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + P+Y++ + VL ACS AG VE+G +F SM KY I PG EHYAC+VDL
Sbjct: 375 FENMIHQ--GSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 432
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA +D A ++I++M P +VWG+LL +CR++ EL A+ LF+L+P ++GN+
Sbjct: 433 LGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNY 492
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL++++A W EA V K ++ G++K GCSWI VK +++ F + D + + EI
Sbjct: 493 VLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIH 552
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL EMKA GY+P TN LYD++EEEK V HSEK+A+AFGLI G IRI
Sbjct: 553 ALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIR 612
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KFIS RE++VRD NRFH F DG CSC DYW
Sbjct: 613 KNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/604 (36%), Positives = 342/604 (56%), Gaps = 24/604 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA LK + + FV + DMY+ A
Sbjct: 267 VRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVA 326
Query: 65 DKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNAC 121
++FD +P R L WNA + G + A++ F + G P T L AC
Sbjct: 327 RRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC 386
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++++ G N V N L+D Y + ++ A+ +F I ++ VSW
Sbjct: 387 ARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWN 446
Query: 182 SMLVVYVQNYEEENGCQMFLTARREG------------------VEPKDFMISSVLSACA 223
+++ V + Q+ +++G V P + + ++L CA
Sbjct: 447 TLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCA 506
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A G+ +H A++ ++ +I VGSALVDMY KCG + + F+++P+RN++ WN
Sbjct: 507 MLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNV 566
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I Y G D A++ F+ M M EA PN VT + L+ACS +G V++GM++F+SM
Sbjct: 567 LIMAYGMHGLGDEAIALFDRMV-MSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKR 625
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPELG 402
+G++P + +AC VD+LGRAG +D AY II M P +S W + L ACR++ LG
Sbjct: 626 NHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLG 685
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
IAA+ LF+L+P+++ ++VLL N+++A G WE++ VR M+ G+ K GCSWI +
Sbjct: 686 EIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGV 745
Query: 463 IHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
IH F A +++H +T + A + L E M+ GY PDT+ L+D+EE EK + +HSEK+
Sbjct: 746 IHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKL 805
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
A+AFGL+ PPG IR+ KNLR+C DCH A KFIS +VGRE+++RD RFH F DG CSC
Sbjct: 806 AIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSC 865
Query: 583 SDYW 586
DYW
Sbjct: 866 GDYW 869
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 29/396 (7%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMF-----DEMPERNLATWNA 81
G++ HA ALK+G + + F + MY++ GL DDA +F + P + TWN
Sbjct: 182 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNT 241
Query: 82 YISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR-S 140
+S V GR AI+ ++ G PD ITF + L ACS +L LGR++H ++++ S
Sbjct: 242 MVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS 301
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQ 198
N V + LVD Y VG+A+ VFD + + W +M+ Y Q +E +
Sbjct: 302 DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALE 361
Query: 199 MFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F E GV P + I+ VL ACAR +VH +K + N FV +AL+D+Y
Sbjct: 362 LFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLY 421
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------TSMRCE- 310
+ G ++ A F + R++V WN +I G QGH A EM T E
Sbjct: 422 ARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTED 481
Query: 311 ---------AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
VPN VTL+ +L C+ A KG +I + +++ + + +VD+
Sbjct: 482 GIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEI-HGYAMRHALDSDIAVGSALVDMY 540
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + + + +P R I+ W L+ A ++G
Sbjct: 541 AKCGCLALSRAVFDRLPKRNVIT-WNVLIMAYGMHG 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 191/403 (47%), Gaps = 18/403 (4%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVF--VGCSAFDMYSKTGLKDDADK 66
+ F P K+++AL + + +H AL+ +H V + Y++ G A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F+ MP R+ T+N+ I+ L R A+DA ++ G T + L ACS +
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 127 -LQLGRQLHGFLVRSGF-DGNVSVC-NGLVDFYGKCNEVGLAKVVFDGIIDKND------ 177
L+LGR+ H F +++GF DG+ N L+ Y + V A+++F G +D D
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLF-GSVDTTDSPGGGV 236
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ + VQ+ ++ GV P +S L AC+++ L LGR +HA
Sbjct: 237 VTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAY 296
Query: 238 AVK-ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHA 294
+K + + N FV SALVDMY + A F+ +P R L WNA++ GYA G
Sbjct: 297 VLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMD 356
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ AL F M + VP+ T+ VL AC+R+ G + + LK G+
Sbjct: 357 EEALELFARMEA-EAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFVQ 414
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++DL R G ++ A I + R +S W L+ C V G
Sbjct: 415 NALMDLYARLGDMEAARWIFAAIEPRDVVS-WNTLITGCVVQG 456
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + PN+ T L + L P GK++H A++ D+ VG + DMY+K G
Sbjct: 489 EPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLAL 548
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACS 122
+ +FD +P+RN+ TWN I + G AI F + + +P+ +TF A L ACS
Sbjct: 549 SRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608
Query: 123 DCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVS 179
++ G +L H G + VD G+ + A + + ++ +
Sbjct: 609 HSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSA 668
Query: 180 WCSML 184
W S L
Sbjct: 669 WSSFL 673
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 210 PKD-FMISSVLSACARIAGLELGRSVHAVAVKA-CVEG-NIFVGSALVDMYGKCGSIQDA 266
P D F + + A + L RS+H A++ + G V +AL+ Y +CG + A
Sbjct: 56 PLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAA 115
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSAC 325
FN MP R+ V +N++I L + + + M E P + TLV VL AC
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRR---WLPALDALRDMLLEGHPLSSFTLVSVLLAC 172
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRA 370
S + + ++ LK G G E +A ++ + R GLVD A
Sbjct: 173 SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 346/559 (61%), Gaps = 6/559 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H A+K G ++FV + D+Y K G+ ++A +F M R+L TWN+ IS G+
Sbjct: 191 MHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQ 250
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCN 150
A+ F +R +G PD++T + +A + + + LH +++R G+D ++ N
Sbjct: 251 TAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGN 310
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVE 209
+VD Y K + + A+ +FD + ++ VSW +++ Y+QN + + + EG++
Sbjct: 311 AIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLK 370
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
SVL A + + L+ G +HA+++K + +++VG+ L+D+Y KCG + +A +
Sbjct: 371 AIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLL 430
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F KMP R+ WNAII G GH AL+ F M + P++VT V +L+ACS AG
Sbjct: 431 FEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIK--PDHVTFVSLLAACSHAG 488
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V++G F M + Y I P A+HYAC+ D+LGRAG +D A+ I+ MP++P +VWGAL
Sbjct: 489 LVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL 548
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++G E+G++A+ NLF+LDP + G +VL+SNM+A G+W+ D VR ++ ++
Sbjct: 549 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQ 608
Query: 450 KGAGCSWISVKNRIHIFQAKDTS--HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
K G S I VK +++F + + + H ++ EIQA L L ++++ GY+ D +F L DVE
Sbjct: 609 KTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVE 668
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
++EK + +HSE++A+AFG+I P P+ I KNLR+CGDCH+A K+IS I RE+IVR
Sbjct: 669 DDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVR 728
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DG+CSC D+W
Sbjct: 729 DSNRFHHFKDGHCSCGDFW 747
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 198/393 (50%), Gaps = 10/393 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADK 66
P+ FTFP L +A+ + + QLHA AL+ G + VF S Y + G +A K
Sbjct: 68 PDGFTFPSLIRAAPS---NASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FDEM ER++ WNA +S R A+ F + G D +T + L C
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L +H + V+ G D + VCN L+D YGK + A+ VF G+ ++ V+W S++
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG 244
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-G 245
Q + +MF R GV P + S+ SA A+ +S+H ++ +
Sbjct: 245 CEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD 304
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+I G+A+VDMY K +I+ A+ F+ MP ++ V WN +I GY G A+ A+ + M
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364
Query: 306 SMR-CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+A+ T V VL A S GA+++GM++ +++++K G+ C++DL +
Sbjct: 365 KHEGLKAIQG--TFVSVLPAYSHLGALQQGMRM-HALSIKIGLNVDVYVGTCLIDLYAKC 421
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G + A + ++MP R T W A+++ V+G
Sbjct: 422 GKLAEAMLLFEKMPRRST-GPWNAIISGLGVHG 453
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF + A S L G ++HAL++K G DV+VG D+Y+K G +A +F++M
Sbjct: 375 TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKM 434
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R+ WNA IS + G A+ F +++ G +PD +TF + L ACS L+ GR
Sbjct: 435 PRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494
Query: 132 QL 133
Sbjct: 495 SF 496
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/580 (38%), Positives = 333/580 (57%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN T + A + L + K +H ++ G +VFV + DMYSK G A ++
Sbjct: 120 PNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ M ERN+ TWNA +S G + AID F +RR G D T + + A L
Sbjct: 180 FESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL 239
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
Q+G +HGF++R+G++ + + L+D Y N V A VF + K+ +W ML +
Sbjct: 240 QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGF 299
Query: 188 VQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ + F + ++ + +LS+C+ L+ GR VHA+A+K C N
Sbjct: 300 SSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANN 359
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
IFVGSA++DMY CG+++DA+ F M E+++VCWNA+I G G+ A+ F +M
Sbjct: 360 IFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG 419
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ T V VL ACS AG V +G++IFY M + P +HYACV+D+LGRAG
Sbjct: 420 SGLD--PDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQ 477
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+D AY I MP +P V+ LL ACR++G +LG + +F+++PND+G +VLLSNM
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNM 537
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A G WE + R ++ +KK G S I + I+ F A + H + +I+ +L L
Sbjct: 538 YALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGL 597
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K AGY+P+TN L DV ++ K + HHSEK+A+AFGL+ P IRITKNLR C
Sbjct: 598 ILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTC 657
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A KF+S + GR ++++D NRFH F DG CSC DYW
Sbjct: 658 DDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 196/390 (50%), Gaps = 5/390 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA + SG H+ F+ S + Y GL DA ++F P +N+ +W IS
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
AID F + +P+ +T + L A ++ L+++ + +H F VR GF+GNV V
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y K +G+A+ +F+ + ++N V+W +++ Y + E +F RR+G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ I S++ A + L++G +H ++ E + + +AL+D+Y + DA
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M +++ W ++ G++ H D A+ F +M ++ + + + L+ +LS+CS +G
Sbjct: 281 FSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS-IALMGILSSCSHSG 339
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+++G ++ +++ +K + V+D+ G ++ A M + + W A+
Sbjct: 340 ALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV-CWNAM 397
Query: 390 L--NACRVYGKPELGRIAADNLFKLDPNDS 417
+ N YG + LDP++S
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ + + +T L AS ++ G +H +++G +D + + D+Y
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
DDA ++F EM +++A W ++ G AI F + + D I L+
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+CS LQ GR++H +++ F N+ V + ++D Y C + AK F G+ +K+ V
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ N + +FL + G++P + SVL AC+ + G + V
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453
Query: 240 KAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
K V N+ + ++D+ G+ G + A N MP + + ++ ++G A + H ++
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG--ACRIHGNIK 511
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
L E++ E PN +LS +G+K+
Sbjct: 512 LG--HEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
S ++ L+ + +HA + + + N F+ ++L++ Y CG + DA+ F+ P +N+V
Sbjct: 29 SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W +I G A A+ F EM + PN VT+ VL A + G + K +
Sbjct: 89 SWTILISGLAKNDCFVEAIDVFREMIMGNFK--PNAVTISSVLPAFANLGLIRIA-KSVH 145
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
++ G + +VD+ + G + A ++ + M R ++ W A+++ +G
Sbjct: 146 CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVT-WNAIVSGYSDHGFS 204
Query: 400 ELGRIAADNLFKL 412
E A +LF L
Sbjct: 205 E----EAIDLFNL 213
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/583 (39%), Positives = 340/583 (58%), Gaps = 10/583 (1%)
Query: 8 PNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
P+ T + A + ALH +++HA AL++G V V + D Y K G + A
Sbjct: 117 PDSVTLVSVLPACADARALH---ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAA 173
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+FD MP RN +WNA I G A+ F + + G + + A L AC +
Sbjct: 174 RAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGEL 233
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSM 183
L R++H LVR G NVSV N L+ Y KC LA VF+ + +K +SW +M
Sbjct: 234 GYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAM 293
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
++ + QN E+ ++F + E V P F + SV+ A A I+ R +H +++ +
Sbjct: 294 ILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL 353
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ +++V +AL+DMY KCG + A F+ +R+++ WNA+I GY G A+ FEE
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M ++PN T + VL+ACS AG V++G K F SM YG++PG EHY +VDLLGR
Sbjct: 414 MKG--TGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGR 471
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG +D A+ IK MP+ P ISV+GA+L AC+++ EL +A +F+L P + HVLL
Sbjct: 472 AGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLL 531
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
+N++A W++ VR M+ G++K G S I +KN +H F + T+H+ +I A L
Sbjct: 532 ANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARL 591
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
KL EE+K GY+PDT+ +++DVE++ K + HSEK+A+A+GLI PG I+I KNL
Sbjct: 592 AKLIEEIKDMGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNL 650
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+C DCH+A K IS + GRE+I+RD RFH F DG CSC DYW
Sbjct: 651 RVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 192/404 (47%), Gaps = 13/404 (3%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF L K +A TG+ +HA G + + +MY K DA ++FD M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGE-PDLITFCAFLNACSDCSLLQL 129
P R+ WNA ++ G P +A++A + ++ GGE PD +T + L AC+D L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
R++H F +R+G D V+V ++D Y KC V A+ VFD + +N VSW +M+ Y
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N +F +EGV+ D + + L AC + L+ R VH + V+ + N+ V
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 250 GSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+AL+ Y KC A FN++ ++ + WNA+I G+ + A F M+
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLF---ARMQ 314
Query: 309 CEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E V P+ TLV V+ A + + + + ++++ + ++D+ + G V
Sbjct: 315 LENVRPDSFTLVSVIPAVADISDPLQA-RWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
A + R I+ W A+++ YG G+ AA LF+
Sbjct: 374 SIARRLFDSARDRHVIT-WNAMIHG---YGSHGFGQ-AAVELFE 412
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 192/427 (44%), Gaps = 48/427 (11%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P L TF A L C+ + L GR +H L G L + Y KC A+ V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GVEPKDFMISSVLSACARIA 226
FD + ++ V+W +++ Y +N + + + + E G P + SVL ACA
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L R VHA A++A ++ + V +A++D Y KCG+++ A F+ MP RN V WNA+I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
GYA G+A A++ F M + +++ L AC G +++ ++ + + ++ G
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTD--ASVLAALQACGELGYLDEVRRV-HELLVRVG 250
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL-----NAC-----RVY 396
+ ++ + D A ++ E+ + T W A++ N C R++
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLF 310
Query: 397 GKPELGRIAADN--LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM-KDVGIKKG-- 451
+ +L + D+ L + P + +S+ A RW +R ++ +DV +
Sbjct: 311 ARMQLENVRPDSFTLVSVIPAVAD----ISDPLQA--RWIHGYSIRHQLDQDVYVLTALI 364
Query: 452 ---AGCSWISVKNRIHIFQAKDTSHERNT-EIQAML------------TKLREEMKAAGY 495
+ C +S+ R+ D++ +R+ AM+ +L EEMK G
Sbjct: 365 DMYSKCGRVSIARRLF-----DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGS 419
Query: 496 IP-DTNF 501
+P +T F
Sbjct: 420 LPNETTF 426
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P+ FT + A + + P+ + +H +++ DV+V + DMYSK G
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD +R++ TWNA I G + A++ F ++ TG P+ TF + L A
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAA 432
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV 162
CS L+ G++ + + G + + +VD G+ ++
Sbjct: 433 CSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKL 475
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/594 (39%), Positives = 348/594 (58%), Gaps = 39/594 (6%)
Query: 29 GKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS--- 84
G+++HA +++G + V +G +MY+K+G DA +F+ M E++ +WN+ IS
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 382
Query: 85 -----------------------NAVLGGRP------KNAIDAFINLRRTGGEPDLITFC 115
N+V+G A+ F+ + R G +TF
Sbjct: 383 QNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 442
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L+A S SL ++ Q+H +++ + ++ N L+ YGKC E+ + +F + +
Sbjct: 443 NILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET 502
Query: 176 ND-VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
D VSW SM+ Y+ N + ++G F +++LSACA +A LE G V
Sbjct: 503 RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEV 562
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA ++AC+E ++ VGSALVDMY KCG I A F MP RN+ WN++I GYA GH
Sbjct: 563 HACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHG 622
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ AL F M M P++VT V VLSACS G VE+G + F SM+ Y + P EH+
Sbjct: 623 EKALKLFTRM--MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHF 680
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKL 412
+C+VDLLGRAG +D + I MPM+P + +W +L AC R G+ ELGR AA+ L +L
Sbjct: 681 SCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLEL 740
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P ++ N+VLL+NM+A+ +WE+ R MK+ +KK AGCSW+++K+ +H+F A D
Sbjct: 741 EPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKL 800
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H I L +L +M+ AGYIP T +AL+D+E E K + +HSEKIA+AF ++
Sbjct: 801 HPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQ 859
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+PIRI KNLR+CGDCHSAF +IS IVGR++++RD+NRFH F DG CSC DYW
Sbjct: 860 SALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 25/325 (7%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
++LH ++K G + ++F+ + ++Y + G A K+FDEM RNL TW IS
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNV 146
G+P A F ++ R G P+ F + L AC + S +LG Q+HG + ++ + +V
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237
Query: 147 SVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
VCN L+ YG C + A+ VFDGI +N +SW S++ VY + + + +F + ++
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 206 EGV----EPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGK 259
EG+ +P D F SVL G GR VHA ++ + N + +G+ LV+MY K
Sbjct: 298 EGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 352
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY--VT 317
G+I DA F M E++ V WN++I G ++ A F M P Y V+
Sbjct: 353 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLM--------PEYDQVS 404
Query: 318 LVCVLSACSRAGA-VEKGMKIFYSM 341
V+ A S + A V + +K F M
Sbjct: 405 WNSVIGALSDSEASVSQAVKYFLQM 429
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 5/312 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
TF + A S+L + Q+HAL LK D +G + Y K G ++ +K+F M
Sbjct: 440 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499
Query: 72 PE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
E R+ +WN+ IS + A+D + + G D TF L+AC+ + L+ G
Sbjct: 500 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 559
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
++H +R+ + +V V + LVD Y KC + A F+ + +N SW SM+ Y ++
Sbjct: 560 MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARH 619
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFV 249
E ++F +G P VLSAC+ + +E G +++ + +
Sbjct: 620 GHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEH 679
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG--YAHQGHADMALSSFEEMTS 306
S +VD+ G+ G + + N MP + N++ W ++G A+ + ++ + E +
Sbjct: 680 FSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE 739
Query: 307 MRCEAVPNYVTL 318
+ + NYV L
Sbjct: 740 LEPQNAVNYVLL 751
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 6/203 (2%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
TF + +N + R+LH ++ GF GN+ + N L++ Y + ++G A+ +FD +
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI--AGLEL 230
++N V+W ++ Y QN + + C F R G P + S L AC +G +L
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G +H + K ++ V + L+ MYG C S DA F+ + RN + WN+II Y+
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280
Query: 290 HQGHADMALSSFEEMTSMRCEAV 312
+G A+S+++ +SM+ E +
Sbjct: 281 RRGD---AVSAYDLFSSMQKEGL 300
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ FTF + A +++ G ++HA +++ DV VG + DMYSK G D A + F
Sbjct: 539 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 598
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ MP RN+ +WN+ IS G + A+ F + G PD +TF L+ACS ++
Sbjct: 599 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVE 658
Query: 129 LG 130
G
Sbjct: 659 EG 660
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 343/558 (61%), Gaps = 3/558 (0%)
Query: 30 KQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K++H AL+ G I D V + Y+K G A+ +F M + +++WNA I V
Sbjct: 420 KEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQ 479
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P+ A+D ++ +R +G EPDL T + L+AC+ L G+++HG ++R+GF+ + +
Sbjct: 480 NGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFI 539
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C LV Y +C ++ LAK+ FD + +KN V W +M+ + QN + MF +
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKI 599
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + I L AC++++ L LG+ +H AVK+ + + FV +L+DMY KCG ++ ++
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+++ + V WN +I GY GH A+ F+ M + P+ VT + +L+AC+ A
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR--PDSVTFIALLTACNHA 717
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V +G++ M +GIKP EHYACVVD+LGRAG ++ A E++ E+P +P +W +
Sbjct: 718 GLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSS 777
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL++CR Y ++G A+ L +L P+ + N+VL+SN +A G+W+E +R+ MK++G+
Sbjct: 778 LLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGL 837
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+K AGCSWI + ++ F D S ++ +IQ +L +++ GY PDT+ L+++EE
Sbjct: 838 QKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEE 897
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+EK+ + +HSEK+A++FGL+ G +R+ KNLRIC DCH+A K +S I RE+IVRD
Sbjct: 898 DEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRD 957
Query: 569 NNRFHRFWDGYCSCSDYW 586
N RFH F +G+CSC DYW
Sbjct: 958 NKRFHHFKNGFCSCGDYW 975
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 196/392 (50%), Gaps = 15/392 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT PC+ KA ++ G+ +H ALK+ + DVFVG + MY K G + A K+
Sbjct: 194 PDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKV 253
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR--TGGEPDLITFCAFLNACSDCS 125
FD+MP+RNL +WN+ + + G + + F L G PD+ T + C+
Sbjct: 254 FDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG 313
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++LG HG ++ G G + V + L+D Y KC + A+V+FD +KN +SW SM+
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIG 372
Query: 186 VYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSAC-ARIAGLELGRSVHAVAVK-AC 242
Y ++ + ++ + E V+ + + +VL C I L+L + +H A++
Sbjct: 373 GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KEIHGYALRHGF 431
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ + V +A V Y KCGS+ AE F M + + WNA+IGG+ G AL +
Sbjct: 432 IQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYL 491
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV--VDL 360
M E P+ T+ +LSAC+R ++ G +I SM L+ G + + + C+ V L
Sbjct: 492 LMRGSGLE--PDLFTIASLLSACARLKSLSCGKEIHGSM-LRNGFE--LDEFICISLVSL 546
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G + A M + + W ++N
Sbjct: 547 YVQCGKILLAKLFFDNMEEKNLV-CWNTMING 577
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 174/376 (46%), Gaps = 9/376 (2%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+++H S DV + MYS D+ +F+ +NL WNA +S +
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYL 171
Query: 88 LGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
++A+ F+ + T PD T + AC ++LG +HGF +++ +V
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDV 231
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEEENGCQMFLTAR 204
V N L+ YGK V A VFD + +N VSW S++ ++N +EE G L
Sbjct: 232 FVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNG 291
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EG+ P + +V+ CAR + LG H +A+K + G + V S+L+DMY KCG +
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A + F+ E+N++ WN++IGGY+ A +M M + N VTL+ VL
Sbjct: 352 EARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKM-QMEDKVKVNEVTLLNVLPV 409
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
C K +K + L++G E A V + G + A + M + +
Sbjct: 410 CEEEIQFLK-LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESK-MV 467
Query: 384 SVWGALLNACRVYGKP 399
S W AL+ G P
Sbjct: 468 SSWNALIGGHVQNGFP 483
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 170/341 (49%), Gaps = 15/341 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L C + +++GR++H F+ S F +V + LV Y C+ + +VF+ K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRS 233
N W ++L Y++N + +F + + E V P +F + V+ AC + + LG +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFV-PDNFTLPCVIKACVGVYDVRLGEA 217
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH A+K V ++FVG+AL+ MYGK G ++ A F+KMP+RNLV WN+++ G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ + F+ + + +P+ T+V V+ C+R G V GM +F+ + LK G+ +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKV 336
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+ ++D+ + G + A ++ + + IS W +++ Y K R A + L K+
Sbjct: 337 NSSLLDMYSKCGYLCEA-RVLFDTNEKNVIS-WNSMIGG---YSKDRDFRGAFELLRKMQ 391
Query: 414 PND--SGNHVLLSNMFAATGRWEEADLVR-KEMKDVGIKKG 451
D N V L N+ EE ++ KE+ ++ G
Sbjct: 392 MEDKVKVNEVTLLNVLPVCE--EEIQFLKLKEIHGYALRHG 430
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 10/324 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ FT L A + L GK++H L++G D F+ S +Y + G
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGK 552
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A FD M E+NL WN I+ P +A+D F + + PD I+ L A
Sbjct: 553 ILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGA 612
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS S L+LG++LH F V+S + V L+D Y KC + ++ +FD + K +V+W
Sbjct: 613 CSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTW 672
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA----GLE-LGRSVH 235
++ Y + ++F + + G P ++L+AC GLE LG+
Sbjct: 673 NVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQS 732
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHA 294
+K +E + +VDM G+ G + +A N++P++ + W++++ +
Sbjct: 733 LFGIKPKLEHY----ACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDL 788
Query: 295 DMALSSFEEMTSMRCEAVPNYVTL 318
D+ ++ + + NYV +
Sbjct: 789 DIGEKVANKLLELGPDKAENYVLI 812
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+PK +I +L C +E+GR +H ++ + ++ + + LV MY C S D+
Sbjct: 91 KPKQ-LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSC 149
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ FN +NL WNA++ GY A+ F EM S+ E VP+ TL CV+ AC
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLT-EFVPDNFTLPCVIKACVG 208
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
V G + + LK + ++ + G+ G V+ A ++ +MP R +S W
Sbjct: 209 VYDVRLGEAV-HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVS-WN 266
Query: 388 ALLNAC 393
+++ AC
Sbjct: 267 SVMYAC 272
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 326/563 (57%), Gaps = 34/563 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G+ D+A ++FD MP RN +W I+ GR + A+D L R G P L +
Sbjct: 362 YMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSL 421
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC--------------- 159
+ ACS L+ GRQ+H V++G N VCN L+ YGKC
Sbjct: 422 TSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRV 481
Query: 160 ----------------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
N + A+ +FD ++ ++ VSW +++ Y Q + + F T
Sbjct: 482 KDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTM 541
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
E +P +++ +LS C + +LG+ +H VA+K ++ + V +AL+ MY KCG
Sbjct: 542 LHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC- 600
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
D+ F+ M ER++ WN I G A G A+ +E M S+ +PN VT V +L+
Sbjct: 601 ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESV--GVLPNEVTFVGLLN 658
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS AG V++G + F SM+ YG+ P EHYAC+VDLLGR G V A + I +MP+ P
Sbjct: 659 ACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDT 718
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W ALL AC+++ E+GR AA+ LF +P+++GN+V+LSN++++ G W E +RK M
Sbjct: 719 VIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIM 778
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K G+ K GCSW+ ++N++H F D HE+ EI L L ++ GY+PDT F L
Sbjct: 779 KQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVL 838
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EE+K + + +HSEK+A+A+GL+ P G+PI+I KNLRICGDCH+ KF+S + R+
Sbjct: 839 HDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRD 898
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
+ +RD NRFH F +G CSC D+W
Sbjct: 899 IDIRDGNRFHHFRNGSCSCGDFW 921
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 187/437 (42%), Gaps = 48/437 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E SP+ F + A + L + L L LK+G DV +G S ++Y++
Sbjct: 214 MHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDAS 273
Query: 61 K-DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A K FD M ERN TW+ I+ GGR IDA I + + + A L
Sbjct: 274 ALDIAIKFFDGMVERNEYTWSTMIAALSHGGR----IDAAIAVYGRDPVKSIPSQTALLT 329
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ C + R L D V N ++ Y + V AK +FD + +N +S
Sbjct: 330 GLARCGRITEAR----ILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTIS 385
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W M+ Y QN E + R G+ P ++S AC+ I LE GR VH++AV
Sbjct: 386 WAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAV 445
Query: 240 KACVEGNIFVGSALVDMYGKCGS-------------------------------IQDAEI 268
KA + N +V +AL+ MYGKC + ++DA
Sbjct: 446 KAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARH 505
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M R++V W II YA D A+ F+ M + PN L +LS C
Sbjct: 506 IFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTM--LHEHEKPNSPILTILLSVCGGL 563
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G+ + G +I +++ +K+G+ ++ + + G D ++++ M R I W
Sbjct: 564 GSAKLGQQI-HTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERD-IFTWNT 620
Query: 389 LLNACRVYGKPELGRIA 405
+ C +G LGR A
Sbjct: 621 FITGCAQHG---LGREA 634
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 169/356 (47%), Gaps = 21/356 (5%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA +F +MP+RNL TW IS V + D F + G PD F + L+A +
Sbjct: 175 DAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK-CNEVGLAKVVFDGIIDKNDVSWC 181
L + L ++++GF+ +V + +++ Y + + + +A FDG++++N+ +W
Sbjct: 235 GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWS 294
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGRSVHAVAVK 240
+M+ + ++ G +P + S+ S A + GL GR A +
Sbjct: 295 TMIAALSHGGRIDAAIAVY------GRDP----VKSIPSQTALLTGLARCGRITEARILF 344
Query: 241 ACVEGNIFVG-SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ I V +A++ Y + G + +A+ F++MP RN + W +I GYA G ++ AL
Sbjct: 345 EQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALD 404
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--V 357
+ + R +P+ +L ACS GA+E G ++ +S+ +K G + + Y C +
Sbjct: 405 LLQALH--RNGMLPSLSSLTSSFLACSHIGALETGRQV-HSLAVKAGCQFNS--YVCNAL 459
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+ + G+ ++ ++ M ++ T+S W + + A E R DN+ D
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAALVQNNMLEDARHIFDNMLSRD 514
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 60/351 (17%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G DA ++FD MPERN WNA +S V G
Sbjct: 105 YARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGD----------------------- 141
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDG----NVSVCNGLVDFYGKCNEVGLAKVVFD 170
+ + R+L FD +V+ N +V Y ++ A +F
Sbjct: 142 ------------ITMARRL--------FDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFK 181
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ +N V+W M+ YV+ + G +F EG P +SVLSA + L +
Sbjct: 182 QMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGV 241
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA-FNKMPERNLVCWNAIIGGYA 289
+ + +K E ++ +G++++++Y + S D I F+ M ERN W+ +I +
Sbjct: 242 LEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALS 301
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
H G D A++ + + V + + +L+ +R G + + +F + P
Sbjct: 302 HGGRIDAAIAVYGR------DPVKSIPSQTALLTGLARCGRITEARILFEQIP-----DP 350
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++ + G+VD A E+ MP R TIS W ++ G+ E
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTIS-WAGMIAGYAQNGRSE 400
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+S++SA LE R + A GN+ + L+ Y + G + DA F+ MPE
Sbjct: 68 NSMISAYCNSGMLEDAR----ILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPE 123
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
RN V WNA++ Y G MA F+ M S + + VT C
Sbjct: 124 RNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYC 168
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
RSVH K+ SA + + G +++A F+ MP R+++ WN++I Y +
Sbjct: 25 RSVHRALDKSA-------HSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNS 77
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + A F+ ++ N T +LS +R G V ++F M + +
Sbjct: 78 GMLEDARILFDAISG------GNVRTATILLSGYARLGRVLDARRVFDGMPERNTVA--- 128
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA-CRVYGKPELGRIAADNLF 410
+ +V + G + A + MP R S W +++ C + A NLF
Sbjct: 129 --WNAMVSCYVQNGDITMARRLFDAMPSRDVTS-WNSMVTGYCH-----SRQMVDAWNLF 180
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEE 435
K P N V + M + R E+
Sbjct: 181 KQMPQR--NLVTWTVMISGYVRIEQ 203
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/557 (39%), Positives = 318/557 (57%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+H A G + ++ V YS DDA +FD M R+ +W+ +
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G N F L R G PD T + AC D LQ+GR +H + + G D + VC
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD YGKC E+ A+ +FD + +++ V+W M+ Y + +F R EGV
Sbjct: 875 AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + +V+ ACA++ + R++ + + ++ +G+A++DM+ KCG ++ A
Sbjct: 935 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M E+N++ W+A+I Y + G AL F M +R +PN +TLV +L ACS AG
Sbjct: 995 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM--LRSGILPNKITLVSLLYACSHAG 1052
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G++ F M Y ++ +HY CVVDLLGRAG +D A ++I M +WGA
Sbjct: 1053 LVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR + L AA +L +L P + G+++LLSN++A GRWE+ +R M +K
Sbjct: 1113 LGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLK 1172
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G +WI V N+ H F DT+H R+ EI ML L +++ GY+PDTNF L+DV+EE
Sbjct: 1173 KIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEE 1232
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
K+ + HSEK+A+AFGLIA P PIRI KNLR+CGDCH+ K +S I GR +IVRD
Sbjct: 1233 LKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDA 1292
Query: 570 NRFHRFWDGYCSCSDYW 586
NRFH F +G CSC DYW
Sbjct: 1293 NRFHHFKEGACSCGDYW 1309
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/515 (37%), Positives = 287/515 (55%), Gaps = 2/515 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA A G + ++ V YS DDA +FD M R+ +W+ +
Sbjct: 79 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G N F L R G PD T + AC D LQ+GR +H + + G D + VC
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y KC E+ A+ +FD + +++ V+W M+ Y + + +F R EGV
Sbjct: 199 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + +V+ ACA++ + R + + + ++ +G+A++DMY KCG ++ A
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M E+N++ W+A+I Y + G AL F M S +P+ +TL +L ACS AG
Sbjct: 319 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS--SGMLPDKITLASLLYACSHAG 376
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G++ F SM Y ++ +HY CVVDLLGRAG +D A ++IK M + +WGA
Sbjct: 377 LVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAF 436
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR + L AA +L +L + G++VLLSN++A GRWE+ +R M +K
Sbjct: 437 LGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLK 496
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G +WI V N+ H F DT+H R+ EI ML L +++ GY+PDTNF L+DV+EE
Sbjct: 497 KTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEE 556
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
K+ + HSEK+A+AFGLIA P PIRI KNLR
Sbjct: 557 LKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 148/291 (50%), Gaps = 7/291 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+++A +C L RQ+H G N+ V N L+ FY + A +FDG+ ++
Sbjct: 65 YISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 124
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW M+ + + + N F R G P ++ + V+ AC + L++GR +H
Sbjct: 125 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH 184
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ K ++ + FV +ALVDMY KC I+DA F+KM ER+LV W +IGGYA G A+
Sbjct: 185 IVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANE 244
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
+L FE+M VP+ V +V V+ AC++ GA+ K +I + +
Sbjct: 245 SLVLFEKMREE--GVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTA 301
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
++D+ + G V+ A EI M + IS W A++ A YG GR A D
Sbjct: 302 MIDMYAKCGCVESAREIFDRMEEKNVIS-WSAMIAA---YGYHGQGRKALD 348
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T P + +A L G+ +H + K G D FV + DMY K +DA +
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD+M ER+L TW I G+ ++ F +R G PD + + AC+ +
Sbjct: 218 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 277
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
R + ++ R F +V + ++D Y KC V A+ +FD + +KN +SW +M+ Y
Sbjct: 278 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 337
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGN 246
+ + +F G+ P ++S+L AC+ +E G R ++ V +
Sbjct: 338 GYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTD 397
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS--SFEE 303
+ + +VD+ G+ G + +A M E++ W A +G A + H D+ L+ +
Sbjct: 398 VKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLG--ACRTHKDVVLAEKAATS 455
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ ++ + +YV L + + R V K + LK
Sbjct: 456 LLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLK 496
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 10/343 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T P + +A L G+ +H + K G D FV + DMY K +DA +
Sbjct: 834 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD+M ER+L TW I G ++ F +R G PD + + AC+ +
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 953
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
R + ++ R F +V + ++D + KC V A+ +FD + +KN +SW +M+ Y
Sbjct: 954 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY 1013
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGN 246
+ + +F R G+ P + S+L AC+ +E G R + V +
Sbjct: 1014 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXD 1073
Query: 247 IFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +VD+ G+ G + +A ++ + E++ W A +G A + H D+ L+ E+
Sbjct: 1074 VKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG--ACRTHKDVXLA--EKAA 1129
Query: 306 SMRCEAVP----NYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ E P +Y+ L + + R V K + LK
Sbjct: 1130 TSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLK 1172
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 338/548 (61%), Gaps = 19/548 (3%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + Y + G D+A +FDEMP+RN+ TW A +S G+ +D L
Sbjct: 178 DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGK----VDVARKLF 233
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG----NVSVCNGLVDFYGKC 159
E + +++ A L + ++ L FD V VCN ++ +G
Sbjct: 234 EVMPERNEVSWTAMLLGYTHSGRMREASSL--------FDAMPVKPVVVCNEMIMGFGLN 285
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
EV A+ VF G+ ++++ +W +M+ VY + E +F +REG+ + SVL
Sbjct: 286 GEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVL 345
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
S C +A L+ G+ VHA V++ + +++V S L+ MY KCG++ A+ FN+ P +++V
Sbjct: 346 SVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVV 405
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
WN++I GY+ G + AL+ F +M S P+ VT + VLSACS +G V++G+++F
Sbjct: 406 MWNSMITGYSQHGLGEEALNVFHDMCS--SGVPPDDVTFIGVLSACSYSGKVKEGLELFE 463
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
+M KY ++PG EHYAC+VDLLGRA V+ A +++++MPM P VWGALL ACR + K
Sbjct: 464 TMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKL 523
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
+L +A + L +L+P ++G +VLLSNM+A GRW + +++R+++K + K GCSWI V
Sbjct: 524 DLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEV 583
Query: 460 KNRIHIFQAKDTS-HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
+ ++H+F D+ H I ML KL ++ AGY PD +F L+DV+EEEK +G+H
Sbjct: 584 EKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYH 643
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+A+GL+ +P G+PIR+ KNLR+CGDCHSA K I+ + GRE+I+RD NRFH F DG
Sbjct: 644 SEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDG 703
Query: 579 YCSCSDYW 586
+CSC DYW
Sbjct: 704 HCSCKDYW 711
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 141/342 (41%), Gaps = 67/342 (19%)
Query: 55 YSKTGLKDDADKMFDE--MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
Y++ G D A K+FDE +P R +++WNA ++ +P+ A+ F + +
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR------- 84
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
N NGL+ + K + A+ VFD +
Sbjct: 85 --------------------------------NTVSWNGLISGHIKNGMLSEARRVFDTM 112
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
D+N VSW SM+ YV+N + ++F + V M+ +L GR
Sbjct: 113 PDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQE---------GR 163
Query: 233 SVHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
A + E ++ + ++ Y + G + +A F++MP+RN+V W A++ GYA
Sbjct: 164 VDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARN 223
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G D+A FE M N V+ +L + +G + + +F +M +K +
Sbjct: 224 GKVDVARKLFEVMPER------NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVV---- 273
Query: 352 EHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
C ++ G G VD+A + K M R W A++
Sbjct: 274 ---VCNEMIMGFGLNGEVDKARRVFKGMKERDN-GTWSAMIK 311
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 30/346 (8%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K G+ +A ++FD MP+RN+ +W + + V G A F ++ +++++
Sbjct: 98 KNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM----PHKNVVSWTV 153
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
L LLQ GR R FD +V ++ Y + + A+ +FD +
Sbjct: 154 MLGG-----LLQEGRVDDA---RKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEM 205
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELG 231
+N V+W +M+ Y +N + + ++F + R V ++ S R E
Sbjct: 206 PKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMR----EAS 261
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
A+ VK V V + ++ +G G + A F M ER+ W+A+I Y +
Sbjct: 262 SLFDAMPVKPVV-----VCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERK 316
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ AL F M R N+ +L+ VLS C +++ G ++ ++ ++
Sbjct: 317 GYELEALGLFRRMQ--REGLALNFPSLISVLSVCVSLASLDHGKQV-HAQLVRSEFDQDL 373
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++ + + G + RA ++ P++ + +W +++ +G
Sbjct: 374 YVASVLITMYVKCGNLVRAKQVFNRFPLKDVV-MWNSMITGYSQHG 418
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 1 MRRECISPNDFTFPCLFKASS---ALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M+RE ++ N FP L S +L GKQ+HA ++S D++V MY K
Sbjct: 329 MQREGLALN---FPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVK 385
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G A ++F+ P +++ WN+ I+ G + A++ F ++ +G PD +TF
Sbjct: 386 CGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGV 445
Query: 118 LNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDK 175
L+ACS ++ G +L + + + + LVD G+ ++V A K+V ++
Sbjct: 446 LSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEP 505
Query: 176 NDVSWCSML 184
+ + W ++L
Sbjct: 506 DAIVWGALL 514
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+A+V Y + ++A + F KMP+RN V WN +I G+ G A F+ M
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDR--- 115
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
N V+ ++ R G V + ++F+ M K + + ++ L + G VD A
Sbjct: 116 ---NVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVS-----WTVMLGGLLQEGRVDDA 167
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRI-AADNLFKLDPNDSGNHVLLSNMFAA 429
++ MP + ++V + C E GR+ A LF P N V + M +
Sbjct: 168 RKLFDMMPEKDVVAVTNMIGGYC------EEGRLDEARALFDEMPKR--NVVTWTAMVSG 219
Query: 430 TGRWEEADLVRK 441
R + D+ RK
Sbjct: 220 YARNGKVDVARK 231
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/614 (39%), Positives = 337/614 (54%), Gaps = 37/614 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P ++ +F+ + L++ G Q+HA L G VG Y+ +G D + +
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ + E + +N+ I G + + + ++ G D TF L + + +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD----------------- 170
+G+ +HG ++R G ++ V L+ YGKC E+ A VFD
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 171 ---GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFM 214
G ID +N VSW +M+ Y Q+ + +F + GV P
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
I SVL ACA+++ LE GR +H +A + + N V AL MY KCGS+ DA F+K+
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367
Query: 275 --ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
E+NL+ WN +I YA GH A+S+F EM + P+ +T +LS CS +G V+
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ--PDDITFTGLLSGCSHSGLVD 425
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G+K F M+ Y I P EHYACV DLLGRAG + A +++ EMPM S+WG+LL A
Sbjct: 426 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CR + E+ AA LF L+P ++GN+VLLSNM+A GRW+E D +R +K G KK
Sbjct: 486 CRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSP 545
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
GCSWI + + H+F DTSH + EI L L E+MKAAGY PDT++ L+D+ EEEK
Sbjct: 546 GCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKE 605
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
+ HSEK+A+AFG++ P +R+TKNLRICGDCH+A FIS I GREVIVRD NRF
Sbjct: 606 FNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRF 665
Query: 573 HRFWDGYCSCSDYW 586
H F G CSC DYW
Sbjct: 666 HHFKGGCCSCGDYW 679
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 37/361 (10%)
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D +P + + IS + +N + G P ++++ + ++L+
Sbjct: 32 DTVPPPSSPPFKCSISPLTISATLQNLLQPL----SAPGPPPILSYAPVFQFLTGLNMLK 87
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LG Q+H ++ G V + +V FY ++ + VF+GI + + + + SM+ Y
Sbjct: 88 LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYA 147
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ E + + G F VL + + + +G+ VH + ++ ++ +++
Sbjct: 148 RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLY 207
Query: 249 VGSALVDMYGKCGSIQDAEIAFN-------------------------------KMPERN 277
V ++L+ +YGKCG I DA F+ +MP RN
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+V W +I GY+ G A ALS F+EM PN+VT++ VL AC++ +E+G +I
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAG-LVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ + + G+ A + + + G LVD K + W ++ A Y
Sbjct: 328 -HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASY 386
Query: 397 G 397
G
Sbjct: 387 G 387
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T + A + L G+Q+H LA + G + V + MY+K G DA
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360
Query: 66 KMFDEM--PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
FD++ E+NL WN I+ G A+ F + + G +PD ITF L+ CS
Sbjct: 361 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 420
Query: 124 CSLLQLG 130
L+ +G
Sbjct: 421 SGLVDVG 427
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/612 (38%), Positives = 338/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK- 66
PN +TFP L K+ + G+QLH LK G D+++ S MY + G +DA K
Sbjct: 101 PNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKV 160
Query: 67 ------------------------------MFDEMPERNLATWNAYISNAVLGGRPKNAI 96
MFDE+P +++ +WNA IS G K A+
Sbjct: 161 XDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEAL 220
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T PD T L+AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 221 ELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLY 280
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC E+ A +F G+ +K+ +SW +++ Y + +F R G +P D +
Sbjct: 281 SKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTML 340
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+LSACA + +++GR +H K V + ++L+DMY KCG I+ A+ F+ M
Sbjct: 341 SILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSML 400
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G ++ G
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE--PDDITFVGLLSACSHSGMLDLG 458
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF SMT Y + P EHY C++DL G +GL A ++I M M P +W +LL AC+
Sbjct: 459 RHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACK 518
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G ELG A NL K++P + G++VLLSN++A RW E R + D G+KK GC
Sbjct: 519 MHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGC 578
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 579 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 638
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 639 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 698
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 699 FRDGECSCNDYW 710
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 174/368 (47%), Gaps = 37/368 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD + E L WN L P +A+ ++ + G P+ TF L +C+
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV--------------- 168
+ G+QLHG +++ GFD ++ + L+ Y + + A+ V
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 169 ----------------FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
FD I K+ VSW + + Y + + ++F + V P +
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +VLSACA+ +ELGR VH+ N+ + +AL+D+Y KCG ++ A F
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F++M +R PN VT++ +LSAC+ GA++
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDM--LRSGEKPNDVTMLSILSACAHLGAID 353
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK G+ + ++D+ + G ++ A ++ M R ++S W A++
Sbjct: 354 IGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNR-SLSSWNAMI 411
Query: 391 NACRVYGK 398
++G+
Sbjct: 412 FGFAMHGR 419
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 158/337 (46%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 226 MMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGE 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F + +++ +WN I K A+ F ++ R+G +P+ +T + L+A
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSA 345
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ A+ VFD +++++
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + +F R+ G+EP D +LSAC+ L+LGR + ++
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ G+ ++
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVEL 525
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
S + + + E +YV L + + R V K
Sbjct: 526 GESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAK 562
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 138/305 (45%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD---FYGKCNEVGLAKVVFDGIID 174
L+ C LQ R +H ++++G + L++ + + A VFD I +
Sbjct: 6 LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ W +M + + + + ++++ G+ P + +L +CA+ + G+ +
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K + ++++ ++L+ MY + G ++DA+ +K R++V + A+I GYA +G
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185
Query: 295 DMALSSFEEM-----------------------------TSMRCEAVPNYVTLVCVLSAC 325
+ A F+E+ M+ P+ T+V VLSAC
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++G++E G ++ +S +G + ++DL + G ++ A + + + + IS
Sbjct: 246 AQSGSIELGRQV-HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS- 303
Query: 386 WGALL 390
W L+
Sbjct: 304 WNTLI 308
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 337/583 (57%), Gaps = 12/583 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK---DDA 64
P+ ++ + A + L G+QLH++AL+ G + D V C DMY+K ++ + A
Sbjct: 244 PDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHA 303
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA-FINLRRTGGEPDLITFCAFLNACSD 123
K+F MP N+ +W A IS V G +N + A F + P+ IT+ L AC++
Sbjct: 304 RKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACAN 363
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S GRQ+H ++++ V N LV Y + + A+ FD + + N +S
Sbjct: 364 LSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILS---- 419
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ V+ C + +GV F +S+LSA A + L G+ +HA+++KA
Sbjct: 420 MSPDVETERNNASCSSKIEGMDDGVST--FTFASLLSAAASVGLLTKGQKLHALSMKAGF 477
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + ++LV MY +CG ++DA AF++M + N++ W +II G A G+A ALS F +
Sbjct: 478 RSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHD 537
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN VT + VLSACS G V++G + F SM +G+ P EHYAC+VDLL R
Sbjct: 538 M--ILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLAR 595
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
+GLV+ A + I EMP + VW LL+ACR YG E+G IAA+++ L+P D +VLL
Sbjct: 596 SGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLL 655
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++A G W+E +R M+D + K G SW+ V N IH F+A DTSH +I A L
Sbjct: 656 SNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKL 715
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
L E+K GY+PDT+ L+D+ EE K + HSEKIA+AFGLI P+RI KNL
Sbjct: 716 VTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNL 775
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+C DCHSA K+IS GRE+I+RD+NRFHR DG CSC +YW
Sbjct: 776 RVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 218/469 (46%), Gaps = 47/469 (10%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYISNA 86
G+ LH L+S + D V S MYSK G + A ++FD+M R+L +W A S
Sbjct: 59 GRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCL 118
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL-GRQLHGFLVRSGFDG- 144
G + ++ + G P+ T CA AC L +L G + GF++++GF G
Sbjct: 119 ARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGT 178
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+VSV L+D + + ++ A+ VFDG+I++ V W ++ YVQ ++FL
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG--- 261
+G EP + +SS++SAC + + LG+ +H+VA++ + + V LVDMY K
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQG-HADMALSSFEEMTSMRCEAV-PNYVTLV 319
S++ A F MP N++ W A+I GY G + ++ F EM + E++ PN++T
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN---ESIRPNHITYS 355
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE--- 376
+L AC+ + G +I ++ LK I +V + +G ++ A + +
Sbjct: 356 NLLKACANLSDQDSGRQI-HAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYE 414
Query: 377 ---MPMRPTIS----------------------VWGALLNACRVYGKPELG-RIAADNLF 410
+ M P + + +LL+A G G ++ A ++
Sbjct: 415 TNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMK 474
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
+D G L +M+A G E+A EMKD + SW S+
Sbjct: 475 AGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNV-----ISWTSI 518
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 195/417 (46%), Gaps = 18/417 (4%)
Query: 8 PNDFTFPCLFKASSALHI-PVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDAD 65
PN FT +A + + G + LK+G DV VGC+ DM+++ G A
Sbjct: 141 PNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQ 200
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD + ER W I+ V G ++ F+++ G EPD + + ++AC++
Sbjct: 201 RVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELG 260
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN---EVGLAKVVFDGIIDKNDVSWCS 182
++LG+QLH +R G + V GLVD Y K + A+ VF + N +SW +
Sbjct: 261 SVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTA 320
Query: 183 MLVVYVQN-YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++ YVQ+ +E N +F E + P S++L ACA ++ + GR +HA +K
Sbjct: 321 LISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKT 380
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ VG+ALV MY + G +++A AF+++ E N++ + + + +
Sbjct: 381 SIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGM 440
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++ S T +LSA + G + KG K+ +++++K G + +V +
Sbjct: 441 DDGVST--------FTFASLLSAAASVGLLTKGQKL-HALSMKAGFRSDQGISNSLVSMY 491
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLN--ACRVYGKPELGRIAADNLFKLDPND 416
R G ++ A EM IS W ++++ A Y K L L + PND
Sbjct: 492 ARCGYLEDACRAFDEMKDHNVIS-WTSIISGLAKHGYAKQALSMFHDMILAGVKPND 547
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 8/298 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN T+ L KA + L +G+Q+HA LK+ H VG + MY+++G
Sbjct: 342 MLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGC 401
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A K FD++ E N+ + + + + I+ + T TF + L+A
Sbjct: 402 MEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVST------FTFASLLSA 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LL G++LH +++GF + + N LV Y +C + A FD + D N +SW
Sbjct: 456 AASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISW 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
S++ ++ + MF GV+P D +VLSAC+ + ++ G+ ++
Sbjct: 516 TSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQK 575
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + + +VD+ + G +++A N+MP + + + W ++ G+ ++
Sbjct: 576 DHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEI 633
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/548 (41%), Positives = 325/548 (59%), Gaps = 41/548 (7%)
Query: 39 SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
+ + DVF + Y++ G+ ++A ++FD MPERN +WNA ++ A
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVA-------------A 295
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
+I R +L + C NV+ N ++ Y +
Sbjct: 296 YIQRRMMDEAKELFN----MMPCR----------------------NVASWNTMLTGYAQ 329
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
+ AK VFD + K+ VSW +ML Y Q E Q+F+ R G + V
Sbjct: 330 AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACV 389
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
LS CA IA LE G +H ++A FVG+AL+ MY KCG+++DA AF +M ER++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WN +I GYA G AL F+ M + + P+ +TLV VL+ACS +G VEKG+ F
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFDMMRTTSTK--PDDITLVGVLAACSHSGLVEKGISYF 507
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
YSM +G+ EHY C++DLLGRAG + A++++K+MP P ++WGALL A R++
Sbjct: 508 YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRN 567
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
PELGR AA+ +F+L+P ++G +VLLSN++A++G+W +A +R M++ G+KK G SWI
Sbjct: 568 PELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIE 627
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V+N++H F A D H +I A L L MK AGY+ T+ L+DVEEEEK + +H
Sbjct: 628 VQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYH 687
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+A+G++ IPPG PIR+ KNLR+CGDCH+AFK+IS I GR +++RD+NRFH F G
Sbjct: 688 SEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGG 747
Query: 579 YCSCSDYW 586
CSC DYW
Sbjct: 748 SCSCGDYW 755
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 150/360 (41%), Gaps = 48/360 (13%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+V A + + G DA+++F MP R+ +T+NA ++ GR A F +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEV 162
R PD ++ L+A + S L R L + VR NV ++ + V
Sbjct: 97 R----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
LA+ FD +K+ VSW ML YV+N E +F + + ++S +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWG 207
Query: 223 ARIAGLEL-----GRSVHAVAVKACVEG--------------------NIFVGSALVDMY 257
EL GR V V+ V G ++F +A+V Y
Sbjct: 208 KMSEARELFDRMPGRDV--VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGY 265
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A F+ MPERN V WNA++ Y + D A F M C V ++ T
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP---CRNVASWNT 322
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ L+ ++AG +E+ +F +M K + +A ++ + G + ++ EM
Sbjct: 323 M---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEM 374
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F C+ + + G QLH +++G FVG + MY K G +DA F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER++ +WN I+ G K A++ F +R T +PD IT L ACS L++
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501
Query: 129 LG 130
G
Sbjct: 502 KG 503
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 128/323 (39%), Gaps = 50/323 (15%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N + + + V A+ +F + ++ ++ +ML Y N +F R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 210 PKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGS----------------- 251
P ++ +++L A A + L R + + V+ V N+ + S
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA 157
Query: 252 ---------ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ Y + G +++A FN E + + WNA++ GY G A F+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFD 217
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + V+ ++S +R G + + ++F + ++ + VV
Sbjct: 218 RMPGR------DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT-----WTAVVSGYA 266
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP--NDSGNH 420
+ G+++ A + MP R +S W A++ A Y + + A LF + P N + +
Sbjct: 267 QNGMLEEARRVFDAMPERNAVS-WNAMVAA---YIQRRM-MDEAKELFNMMPCRNVASWN 321
Query: 421 VLLSNMFAATGRWEEADLVRKEM 443
+L+ +A G EEA V M
Sbjct: 322 TMLTG-YAQAGMLEEAKAVFDTM 343
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+E + + + + + G + DAE F MP R+ +NA++ GY+ G +A S F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF- 92
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
R P+ + +L A + + ++ +F M ++ + Y ++
Sbjct: 93 -----RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT-----YNVMISSHA 142
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
GLV A P + +S W +L A G+ E R
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVS-WNGMLAAYVRNGRVEEAR 182
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/548 (41%), Positives = 325/548 (59%), Gaps = 41/548 (7%)
Query: 39 SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
+ + DVF + Y++ G+ ++A ++FD MPERN +WNA ++ A
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVA-------------A 295
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
+I R +L + C NV+ N ++ Y +
Sbjct: 296 YIQRRMMDEAKELFN----MMPCR----------------------NVASWNTMLTGYAQ 329
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
+ AK VFD + K+ VSW +ML Y Q E Q+F+ R G + V
Sbjct: 330 AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACV 389
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
LS CA IA LE G +H ++A FVG+AL+ MY KCG+++DA AF +M ER++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WN +I GYA G AL F+ M + + P+ +TLV VL+ACS +G VEKG+ F
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFDMMRTTSTK--PDDITLVGVLAACSHSGLVEKGISYF 507
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
YSM +G+ EHY C++DLLGRAG + A++++K+MP P ++WGALL A R++
Sbjct: 508 YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRN 567
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
PELGR AA+ +F+L+P ++G +VLLSN++A++G+W +A +R M++ G+KK G SWI
Sbjct: 568 PELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIE 627
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V+N++H F A D H +I A L L MK AGY+ T+ L+DVEEEEK + +H
Sbjct: 628 VQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYH 687
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+A+G++ IPPG PIR+ KNLR+CGDCH+AFK+IS I GR +++RD+NRFH F G
Sbjct: 688 SEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGG 747
Query: 579 YCSCSDYW 586
CSC DYW
Sbjct: 748 SCSCGDYW 755
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 151/360 (41%), Gaps = 48/360 (13%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+V A + + G DA+++F MP R+ +T+NA ++ GR A F +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEV 162
R PD ++ L+A + S L R L + VR NV ++ + V
Sbjct: 97 R----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
LA+ FD +K+ VSW ML YV+N E +F + V + ++S +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWG 207
Query: 223 ARIAGLEL-----GRSVHAVAVKACVEG--------------------NIFVGSALVDMY 257
EL GR V V+ V G ++F +A+V Y
Sbjct: 208 KMSEARELFDRMPGRDV--VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGY 265
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A F+ MPERN V WNA++ Y + D A F M C V ++ T
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP---CRNVASWNT 322
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ L+ ++AG +E+ +F +M K + +A ++ + G + ++ EM
Sbjct: 323 M---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEM 374
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F C+ + + G QLH +++G FVG + MY K G +DA F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER++ +WN I+ G K A++ F +R T +PD IT L ACS L++
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501
Query: 129 LG 130
G
Sbjct: 502 KG 503
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N + + + V A+ +F + ++ ++ +ML Y N +F R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 210 PKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGS----------------- 251
P ++ +++L A A + L R + + V+ V N+ + S
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA 157
Query: 252 ---------ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ Y + G +++A FN E +++ WNA++ GY G A F+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + V+ ++S +R G + + ++F + ++ + VV
Sbjct: 218 RMPGR------DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT-----WTAVVSGYA 266
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP--NDSGNH 420
+ G+++ A + MP R +S W A++ A Y + + A LF + P N + +
Sbjct: 267 QNGMLEEARRVFDAMPERNAVS-WNAMVAA---YIQRRM-MDEAKELFNMMPCRNVASWN 321
Query: 421 VLLSNMFAATGRWEEADLVRKEM 443
+L+ +A G EEA V M
Sbjct: 322 TMLTG-YAQAGMLEEAKAVFDTM 343
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+E + + + + + G + DAE F MP R+ +NA++ GY+ G +A S F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF- 92
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
R P+ + +L A + + ++ +F M ++ + Y ++
Sbjct: 93 -----RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT-----YNVMISSHA 142
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
GLV A P + +S W +L A G+ E R
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVS-WNGMLAAYVRNGRVEEAR 182
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/533 (39%), Positives = 330/533 (61%), Gaps = 3/533 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLIT 113
Y++ GL ++A +FDEMPER+ +W A ++ V +P+ A+ + ++R +P++ T
Sbjct: 163 YAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFT 222
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ + A + ++ G+++HG +VR+G D + + + L+D YGKC + A+ +FD II
Sbjct: 223 VSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKII 282
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
DK+ VSW SM+ Y ++ G +F P ++ S VL+ACA + ELGR
Sbjct: 283 DKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQ 342
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + F S+L+DMY KCG+I+ A + P+ +LV ++IGGYA G
Sbjct: 343 VHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGK 402
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D AL F+ + ++ P++VT V VLSAC+ AG VEKG++ FYS+T K+ + ++H
Sbjct: 403 PDEALKYFDLL--LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDH 460
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y C+VDLL R+G ++ ++ EMPM+P+ +W ++L C YG +L AA LFK++
Sbjct: 461 YTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 520
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + +V ++N++AA G+WEE +RK M+++GI K G SW +K + H+F A DTSH
Sbjct: 521 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSH 580
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+I L +LR++MK GY+P T+ L+DVE+E+K + +HSEK+A+AF +++
Sbjct: 581 PMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEE 640
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G I++ KNLR C DCHSA KFIS I R++ +RD+ RFH F +G CSC DYW
Sbjct: 641 GTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 8/348 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FT A++A+ GK++H +++G D + S DMY K G D+A +
Sbjct: 218 PNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 277
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++ ++++ +W + I R + F L + P+ TF LNAC+D +
Sbjct: 278 FDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTE 337
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+LGRQ+HG++ R GFD + L+D Y KC + A+ V DG + VS S++ Y
Sbjct: 338 ELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGY 397
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGN 246
QN + + + F + G +P +VLSAC +E G +++ K +
Sbjct: 398 AQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHT 457
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ LVD+ + G + + ++MP + + W +++GG + G+ D+A + +E+
Sbjct: 458 SDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 517
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPGA 351
+ E YVT+ + +A AG E+ K+ M + GI KPG+
Sbjct: 518 KIEPENPVTYVTMANIYAA---AGKWEEEGKMRKRMQ-EIGITKKPGS 561
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 38/362 (10%)
Query: 100 INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
+ L +P T+C + CS L+ G+++H + SGF + + N ++ Y KC
Sbjct: 76 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKC 135
Query: 160 N----------------------------EVGL---AKVVFDGIIDKNDVSWCSMLVVYV 188
EVGL A+ +FD + +++ SW +M+ YV
Sbjct: 136 GSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYV 195
Query: 189 QNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + E ++ L R +P F +SS ++A A I + G+ +H V+A ++ +
Sbjct: 196 KKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDE 255
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ S+L+DMYGKCG I +A F+K+ ++++V W ++I Y S F E+
Sbjct: 256 VLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIG- 314
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
CE PN T VL+AC+ E G ++ MT + G P + + ++D+ + G +
Sbjct: 315 SCER-PNEYTFSGVLNACADLTTEELGRQVHGYMT-RVGFDPYSFASSSLIDMYTKCGNI 372
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A ++ P +P + +L+ GKP+ D L K +HV N+
Sbjct: 373 ESARHVVDGCP-KPDLVSLTSLIGGYAQNGKPDEALKYFDLLLK--SGTKPDHVTFVNVL 429
Query: 428 AA 429
+A
Sbjct: 430 SA 431
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C PN++TF + A + L G+Q+H + G F S DMY+K G + A
Sbjct: 316 CERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESA 375
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ D P+ +L + + I G+P A+ F L ++G +PD +TF L+AC+
Sbjct: 376 RHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 435
Query: 125 SLLQLGRQL 133
L++ G +
Sbjct: 436 GLVEKGLEF 444
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 324/549 (59%), Gaps = 44/549 (8%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
N+ +WN+ I+ G A+ AF ++R+ +P+ TF + +CS L GRQ H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
+ GF+ ++ V + LVD Y KC E+ A+ +FD I +N VSW SM+ YVQN +
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 195 NGCQMFLTARREGVEPKDFM-------------------------------------ISS 217
++F +G+ +D + +S+
Sbjct: 160 RALRVF-----DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSA 214
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
VL ACA LG+ +H +K +E N+FVG++++DMY KCG ++ A AF++M E+N
Sbjct: 215 VLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 274
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ W+A++ GY GHA AL F EM + PNY+T V VL+ACS AG +E+G
Sbjct: 275 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK--PNYITFVSVLAACSHAGLLEEGWHW 332
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
F +M+ ++ ++PG EHY C+VDLLGRAG + A+++IK M +RP VWGALL ACR++
Sbjct: 333 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 392
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
+LG I+A LF+LDP + G +VLLSN++A GRWE+ + +R MK+ G+ K G S +
Sbjct: 393 NVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 452
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
+K R+H+F D H ++ +I L KL +++ GY+PD L+DV EEK +
Sbjct: 453 DIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRV 512
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSEK+A+AFG++ PG I I KNLR+CGDCH+A KFIS IV RE++VRD+ RFH F D
Sbjct: 513 HSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRD 572
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 573 GLCSCGDYW 581
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 193/424 (45%), Gaps = 50/424 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + PN TFPC K+ SAL +G+Q H AL G D+FV + DMYSK G
Sbjct: 67 MRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGE 126
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLG----- 89
DA +FDE+ RN+ +W + I+ N+++
Sbjct: 127 LRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQN 186
Query: 90 GRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +++ F + + G + +T A L AC+ +LG+ +H +++ G + NV V
Sbjct: 187 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 246
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++D Y KC +V +A+ FD + +KN SW +M+ Y + + ++F GV
Sbjct: 247 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 306
Query: 209 EPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P SVL+AC+ LE G A++ + VE + +VD+ G+ G +++A
Sbjct: 307 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 366
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
M R + V W A++G + D+ S ++ + + YV L + +
Sbjct: 367 DLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG 426
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV----------DRAYEIIKE 376
R VE+ M+I M +KP +VD+ GR + ++ YE +++
Sbjct: 427 RWEDVER-MRIL--MKNSGLVKPPG---FSLVDIKGRVHVFLVGDREHPQHEKIYEYLEK 480
Query: 377 MPMR 380
+ M+
Sbjct: 481 LSMK 484
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 351/621 (56%), Gaps = 37/621 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ I P+ F KA + + K++H A + G + DVFVG + Y K
Sbjct: 155 LQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKC 214
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD++ R++ +W + S V G P+ +D F + +G +P+ +T + L A
Sbjct: 215 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 274
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G+++HGF VR G N+ VC+ LV Y KC V A++VFD + ++ VSW
Sbjct: 275 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 334
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGV-------------------------------- 208
+L Y +N E E G +FL R+GV
Sbjct: 335 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 394
Query: 209 ---EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+P + ISS+L AC+ L +G+ +H + G++ +AL+ MY KCG +
Sbjct: 395 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 454
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ M +++V WN +I A G+ AL F++M R + PN VT VLS C
Sbjct: 455 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ--PNSVTFTGVLSGC 512
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S + VE+G++IF SM + ++P A HY+CVVD+ RAG ++ AY+ I+ MPM PT S
Sbjct: 513 SHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASA 572
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL ACRVY EL +I+A LF+++PN+ GN+V L N+ W EA VR MK+
Sbjct: 573 WGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKE 632
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
GI K GCSW+ V N++H F D S+ + +I L +L E+MK AGY PDT++ L D
Sbjct: 633 RGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQD 692
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+++EEK + +HSEK+A+AFG++ + IR+ KNLRICGDCH+A K++S +VG ++
Sbjct: 693 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIV 752
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+ RFH F +G CSC D W
Sbjct: 753 VRDSLRFHHFKNGNCSCKDLW 773
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 146/289 (50%), Gaps = 3/289 (1%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD +P+ + T + IS G AI + +L+ G +PD+ F A AC
Sbjct: 115 NRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKAC 174
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +++H R G +V V N L+ YGKC V A+ VFD ++ ++ VSW
Sbjct: 175 AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWT 234
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
S+ YV+ G +F GV+P +SS+L ACA + L+ G+ +H AV+
Sbjct: 235 SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRH 294
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ N+FV SALV +Y KC S+++A + F+ MP R++V WN ++ Y + S F
Sbjct: 295 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+M+ A + T V+ C G E+ +++F M K G KP
Sbjct: 355 LKMSRDGVRA--DEATWNAVIGGCMENGRSEEAVEMFRKMQ-KMGFKPN 400
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN-GCQMFLTARREGVEPKDFMISSVLSACA 223
A+ +FD I + D + CS L+ + + N +++ + + G++P + + ACA
Sbjct: 117 ARQLFDNI-PQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 175
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ VH A + V ++FVG+AL+ YGKC ++ A F+ + R++V W +
Sbjct: 176 VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 235
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+ Y G + F EM + PN +T+ +L AC+ ++ G +I + +
Sbjct: 236 LSSCYVKCGFPRKGMDVFREMGWSGVK--PNPMTVSSILPACAELKDLKSGKEI-HGFAV 292
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++G+ + +V L + V A + MP R +S W +L A
Sbjct: 293 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNGVLTA 340
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 339/587 (57%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN T +F A + GK ++ L DV V SA +M+ GL
Sbjct: 197 MQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGL 256
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F++M +R++ TWN I+ V A+ F L++ G + + ITF LN
Sbjct: 257 LGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNV 316
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + L G+ +H + +G+D + V L+ YG+C G A +F + K+ ++W
Sbjct: 317 YTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITW 376
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M V Y QN + Q+F + EG P + +VL CA +A L+ GR +H+ ++
Sbjct: 377 TVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIE 436
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +AL++MYGKCG + +A F KM +R+++ WN+++G YA G+ D L
Sbjct: 437 NRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQL 496
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M +A + V+ V VLSA S +G+V G + F +M + I P E Y CVVDL
Sbjct: 497 FNQMQLDGVKA--DAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDL 554
Query: 361 LGRAGLVDRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LGRAG + A +I+ ++ P +W LL ACR + K + + AA+ + + DP+ SG
Sbjct: 555 LGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGA 614
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V+LSN++AA G W+ + +RK M+ G+KK G S I + NR+H F D SH R I
Sbjct: 615 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPI 674
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L L EM+AAGYIPDT L+DVE+E K + +HSE++A+AFGLI+ PPG P+R+
Sbjct: 675 YAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRV 734
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K+IS + GRE++VRD +RFH F DG CSC DYW
Sbjct: 735 IKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 192/398 (48%), Gaps = 6/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P T+ + A ++ G ++H L+ G DVFVG + +MY+K G
Sbjct: 96 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 155
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A F + R++ +W A I+ V + A + ++ G P+ IT NA
Sbjct: 156 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 215
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
D + L G+ ++G + + +V V N V+ +G +G A+ +F+ ++D++ V+W
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ +YVQN ++F +++GV+ D +L+ + L G+ +H + +
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + + V +AL+ +YG+C + A F M ++++ W + YA G AL
Sbjct: 336 AGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 395
Query: 301 FEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+E M+ E P TLV VL C+ A++KG +I +S ++ + +++
Sbjct: 396 FQE---MQLEGRRPTSATLVAVLDTCAHLAALQKGRQI-HSHIIENRFRMEMVVETALIN 451
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G+ G + A + ++M R I VW ++L A +G
Sbjct: 452 MYGKCGKMAEAMSVFEKMAKRD-ILVWNSMLGAYAQHG 488
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 170/356 (47%), Gaps = 25/356 (7%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+PD F A L CS + GR++H + GF+ N VC L+ Y +C V A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 168 VFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
VF+ I+++ DV +W M+ +Y Q + + MF + E V P ++L+ACA
Sbjct: 61 VFE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L+ G +H ++ EG++FVG+AL++MY KCGS++ A +F ++ R++V W A+I
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
H AL+ + VPN +TL V +A + +G K Y +
Sbjct: 180 ACVQ--HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGV 236
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN----------ACRVY 396
++ V++ G AGL+ A + ++M R ++ W ++ A R++
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVT-WNIVITLYVQNENFGEAVRLF 295
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
G+ + + A+++ VL+ N++ + + ++ + +K+ G + A
Sbjct: 296 GRLQQDGVKANDI---------TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDA 342
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 174/377 (46%), Gaps = 3/377 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ F L + S+ G+++H G + V MY++ G +A ++
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ + +++ W I G A+ F ++ P +T+ A LNAC+ L
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G ++HG +++ GF+G+V V L++ Y KC V A F + ++ VSW +M+
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
VQ+ + ++ + +GV P + +V +A L G+ V+ + +E ++
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++ V+M+G G + DA F M +R++V WN +I Y + A+ F +
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+A N +T V +L+ + ++ KG K+ + + + G A ++ L GR
Sbjct: 302 GVKA--NDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358
Query: 368 DRAYEIIKEMPMRPTIS 384
+A++I +M + I+
Sbjct: 359 GQAWKIFVDMGSKDVIT 375
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 335/575 (58%), Gaps = 3/575 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L A L K++ + SG D++V ++ K GL DA K+FDEM
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PE+++A+W I V G A F+ + + TF + A + L+Q+GR
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q+H ++ G + V L+D Y KC + A VFD + +K V W S++ Y +
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E + R G + F IS V+ CAR+A LE + HA V+ + +I +
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD Y K G ++DA FN+M +N++ WNA+I GY + G + A+ FE+M +R
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQM--LREGM 416
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
+PN+VT + VLSACS +G E+G +IFYSM+ + +KP A HYAC+V+LLGR GL+D AY
Sbjct: 417 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAY 476
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
E+I+ P +PT ++W LL ACR++ ELG++AA+NL+ ++P N+++L N++ ++G
Sbjct: 477 ELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSG 536
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+ +EA V + +K G++ C+WI VK + + F D SH + EI + + E+
Sbjct: 537 KLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEIS 596
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY+ + L DV+EEE+ + +HSEK+A+AFGLI P P++IT+ R+CGDCHS
Sbjct: 597 RHGYVEENKALLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHS 655
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A KFI+ + GRE++VRD +RFH F DG CSC DYW
Sbjct: 656 AIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 170/322 (52%), Gaps = 10/322 (3%)
Query: 83 ISNAVLGGRPKNAIDAF--INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS 140
I VL R + A++ F + L G + T+ A ++AC ++ +++ ++V S
Sbjct: 87 IEKLVLCNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNS 146
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ--NYEEENGCQ 198
GF+ ++ V N ++ + KC + A+ +FD + +K+ SW +M+ +V N+ E G
Sbjct: 147 GFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFG-- 204
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+FL E + + ++++ A A + +++GR +H+ A+K V + FV AL+DMY
Sbjct: 205 LFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYS 264
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCGSI+DA F++MPE+ V WN+II YA G+++ ALS + EM A ++ T+
Sbjct: 265 KCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRD--SGAKIDHFTI 322
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V+ C+R ++E K ++ ++ G +VD + G ++ A+ + M
Sbjct: 323 SIVIRICARLASLEYA-KQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMR 381
Query: 379 MRPTISVWGALLNACRVYGKPE 400
+ IS W AL+ +G+ E
Sbjct: 382 RKNVIS-WNALIAGYGNHGQGE 402
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + FT + + + L KQ HA ++ G D+ + D YSK G
Sbjct: 310 MRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGR 369
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ M +N+ +WNA I+ G+ + A++ F + R G P+ +TF A L+A
Sbjct: 370 MEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSA 429
Query: 121 CSDCSLLQLGRQL 133
CS L + G ++
Sbjct: 430 CSYSGLSERGWEI 442
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 330/559 (59%), Gaps = 7/559 (1%)
Query: 33 HALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRP 92
H+ +KSG +D F + Y + D A K+FDEMP RN+ +W + ++ V G+P
Sbjct: 47 HSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMAGYVSQGQP 106
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
A+ F ++ T P+ TF +NACS + L++GR++H + SG N+ C+ L
Sbjct: 107 NMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSL 166
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PK 211
+D YGKCN V A+++FD + +N VSW SM+ Y QN + + Q+F ++ P
Sbjct: 167 IDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPN 226
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
FM+ S +SACA + L G+ H V ++ E + + SALVDMY KCG + + F
Sbjct: 227 HFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFR 286
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
++ +++ + ++I G A G ++L F+EM R + PN +T V VL ACS +G V
Sbjct: 287 RIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIK--PNDITFVGVLHACSHSGLV 344
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT--ISVWGAL 389
+KG+++ SM KYG+ P A+HY C+ D+LGR G ++ AY++ K + + +WG L
Sbjct: 345 DKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTL 404
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L+A R+YG+ ++ A++ L + + +G +V LSN +A G WE A +R EMK G+
Sbjct: 405 LSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVY 464
Query: 450 KGAGCSWISVKNRIHIFQAKDTS-HERNTEIQAMLTKLREEMKAAGYIPDTN-FALYDVE 507
K G SWI +K ++F A D S + + EI ++L +L E MK GY+ T DVE
Sbjct: 465 KEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEERMKGRGYVGGTKGLVFVDVE 524
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE K V HSEK+ALAFGLI P GV IRI KNLR+C DCH AFK IS IV RE++VR
Sbjct: 525 EEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMCRDCHGAFKLISDIVERELVVR 584
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F +G C+C D+W
Sbjct: 585 DVNRFHHFKNGLCTCGDFW 603
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 11/326 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN+FTF L A S L G+++HAL SG ++ S DMY K
Sbjct: 116 MQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNH 175
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLN 119
D+A +FD M RN+ +W + I+ + +A+ F + +P+ C+ ++
Sbjct: 176 VDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVS 235
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L G+ HG ++R G + + + + LVD Y KC V + +F I + + +
Sbjct: 236 ACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIP 295
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA----GLELGRSVH 235
+ SM+V + Q+F ++P D VL AC+ GLEL S+
Sbjct: 296 YTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMD 355
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERN--LVCWNAIIGGYAHQG 292
K V + + + DM G+ G I++A ++A + E + + W ++ G
Sbjct: 356 G---KYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYG 412
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTL 318
D+AL + + + YVTL
Sbjct: 413 RVDIALEASNRLIESNQQVAGAYVTL 438
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 335/586 (57%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P TF L + + + G +H + SG D F+ +MY + G D A K
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDC 124
+FDE ER + WNA + G K +D +I + G D T+ L AC S+
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194
Query: 125 SL--LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
S+ L+ G+++H ++R G++ N+ V L+D Y K V A VF + KN VSW +
Sbjct: 195 SVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + +N ++F E P + ++L ACA +A LE G+ +H ++
Sbjct: 255 MIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILR 314
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V +AL+ MYG+CG + + F+ M +R++V WN++I Y G A+
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M P+Y++ + VL ACS AG VE+G +F SM KY I PG EHYAC+VDL
Sbjct: 375 FENMIHQGVS--PSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 432
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA + A ++I++M P +VWG+LL +CR++ EL A+ LF+L+P ++GN+
Sbjct: 433 LGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNY 492
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL++++A W EA V K ++ G++K GCSWI VK +++ F + D + + EI
Sbjct: 493 VLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIH 552
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL EMKA GY+P TN LYD++EEEK V HSEK+A+AFGLI G IRI
Sbjct: 553 ALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIR 612
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KFIS RE++VRD NRFH F DG CSC DYW
Sbjct: 613 KNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 332/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN +T+P + K L G+Q+H+ +K+ + +V DMY+K G
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + +++ +W I+ A+ F + G D + ++A
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H SGF ++ N LV Y +C ++ + + F+ ++++W
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q+ E ++F+ REG++ +F S + A + A ++ G+ VHAV K
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +AL+ MY KCGSI DAE F ++ +N V WNAII Y+ G AL S
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + PN+VTLV VLSACS G V+KG+ F SM +YG+ P EHY CVVD+
Sbjct: 781 FDQM--IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAGL+ RA E I+EMP++P VW LL+AC V+ E+G AA +L +L+P DS +
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A + +W+ DL R++MK+ G+KK G SWI VKN IH F D +H EI
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L + GY+ D L +++ E+K + HSEK+A++FGL+++P VPI +
Sbjct: 959 EYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVM 1018
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KF+S + RE+IVRD RFH F G CSC DYW
Sbjct: 1019 KNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 180/395 (45%), Gaps = 4/395 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P + F + A + G+QLH L LK G D +V + +Y G A+
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F M +R+ T+N I+ G + A++ F + G EPD T + + ACS
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+QLH + + GF N + L++ Y KC ++ A F +N V W MLV
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + N ++F + E + P + S+L C R+ LELG +H+ +K +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N +V S L+DMY K G + A + +++V W +I GY D AL++F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + V L +SAC+ A+++G +I ++ G +V L R G
Sbjct: 584 DRGIRS--DEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ +Y ++ I+ W AL++ + G E
Sbjct: 641 KIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 674
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 185/392 (47%), Gaps = 12/392 (3%)
Query: 6 ISPNDFTFPCLF----KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
I PN T L K + +L G++LH+ LK G + + FD Y G
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLD---EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
A K+FDEMPER + TWN I F+ + P+ TF L AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 122 SDCSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S+ + Q+H ++ G + VCN L+D Y + V LA+ VFDG+ K+ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +N E ++F G+ P + SSVLSAC +I LE+G +H + +K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +V +ALV +Y G++ AE F+ M +R+ V +N +I G + G+ + A+
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M E P+ TL ++ ACS G + +G ++ ++ T K G + +++L
Sbjct: 377 FKRMHLDGLE--PDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNL 433
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ ++ A + E + + +W +L A
Sbjct: 434 YAKCADIETALDYFLETEVENVV-LWNVMLVA 464
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 9/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAF-DMYSKT 58
M E ++PN+ TF + +A + +Q+HA L G + D V C+ D+YS+
Sbjct: 177 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG-LRDSTVVCNPLIDLYSRN 235
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G D A ++FD + ++ ++W A IS AI F ++ G P F + L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+AC L++G QLHG +++ GF + VCN LV Y + A+ +F + ++ V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
++ +++ Q E ++F +G+EP ++S++ AC+ L G+ +HA
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
K N + AL+++Y KC I+ A F + N+V WN ++ Y G D
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLR 472
Query: 299 SSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+SF M+ E VPN T +L C R G +E G +I +S +K + A + +
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTNFQLNAYVCSVL 531
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+D+ + G +D A++I+ + +S W ++ Y
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQY 569
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 14/433 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ T L A SA G+QLHA K G + + + ++Y+K
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A F E N+ WN + L +N+ F ++ P+ T+ + L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+LG Q+H ++++ F N VC+ L+D Y K ++ A + K+ VSW
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q ++ F G+ + +++ +SACA + L+ G+ +HA +
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA---Q 616
Query: 241 ACVEG---NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
ACV G ++ +ALV +Y +CG I+++ +AF + + + WNA++ G+ G+ + A
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M R N T + A S +++G ++ +++ K G E +
Sbjct: 677 LRVFVRMN--REGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAL 733
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPND 416
+ + + G + A + E+ + +S W A++NA Y K G A D+ ++ N
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINA---YSKHGFGSEALDSFDQMIHSNV 789
Query: 417 SGNHVLLSNMFAA 429
NHV L + +A
Sbjct: 790 RPNHVTLVGVLSA 802
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 12/318 (3%)
Query: 106 GGEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G P+ T L C + L GR+LH +++ G D N + L DFY ++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-A 223
A VFD + ++ +W M+ +F+ E V P + S VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
++ +HA + + + V + L+D+Y + G + A F+ + ++ W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I G + A+ F +M + +P VLSAC + ++E G ++ + + L
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGI--MPTPYAFSSVLSACKKIESLEIGEQL-HGLVL 315
Query: 344 KYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV--YGKP 399
K G ++ Y C +V L G + A I M R ++ + L+N YG+
Sbjct: 316 KLGF--SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-YNTLINGLSQCGYGEK 372
Query: 400 ELGRIAADNLFKLDPNDS 417
+ +L L+P+ +
Sbjct: 373 AMELFKRMHLDGLEPDSN 390
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 202 TARREGVEPKDFMISSVLSACARIAG-LELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ G+ P + +L C + G L+ GR +H+ +K ++ N + L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F++MPER + WN +I A + F M S PN T
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN--VTPNEGTFSG 191
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL AC ++ ++ L G++ ++DL R G VD A + + ++
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 381 PTISVWGALLN 391
S W A+++
Sbjct: 252 DH-SSWVAMIS 261
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 324/516 (62%), Gaps = 3/516 (0%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M R++ +W + I+ P A+ + + R +P+ TF + L A + +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H V+ + +V V + L+D Y +C + +A VFD + KN VSW +++ + +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ E MF +R G E F SSV SA A I LE G+ VHA +K+ + FVG
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ ++DMY K GS+ DA F+ + +++LV WN+++ +A G A++ FEEM +C
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR--KCG 238
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
N +T + +L+ACS G V++G K ++ M ++ ++P +HY VVDLLGRAGL++ A
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEG-KQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDA 297
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
I +MPM+PT +VWGALL +CR++ ++G+ AAD++F+LDP+D+G VLL N++A+T
Sbjct: 298 LVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAST 357
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
G+W+ A VRK MK G+KK CSW+ ++N +H+F A D +H R+ EI ++ ++
Sbjct: 358 GQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI 417
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
+ AGY+P+T++ L V+E+E+ ++ +HSEKIALAF LI +P G IRI KN+RICGDCH
Sbjct: 418 RKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCH 477
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
SAF++IS + RE++VRD NRFH F G CSC DYW
Sbjct: 478 SAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 1/280 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FTF L KA+ A G+Q+HAL +K DV+VG + DMY++ G D A +
Sbjct: 39 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 98
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++ +N +WNA I+ G + + F ++R G E T+ + +A + L
Sbjct: 99 FDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGAL 158
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G+ +H +++SG + V N ++D Y K + A+ VFD + K+ V+W SML +
Sbjct: 159 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAF 218
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q F R+ GV S+L+AC+ ++ G+ + + +E I
Sbjct: 219 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEI 278
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIG 286
+VD+ G+ G + DA + KMP + W A++G
Sbjct: 279 DHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 318
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 332/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN +T+P + K L G+Q+H+ +K+ + +V DMY+K G
Sbjct: 441 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 500
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + +++ +W I+ A+ F + G D + ++A
Sbjct: 501 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 560
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H SGF ++ N LV Y +C ++ + + F+ ++++W
Sbjct: 561 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 620
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q+ E ++F+ REG++ +F S + A + A ++ G+ VHAV K
Sbjct: 621 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 680
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +AL+ MY KCGSI DAE F ++ +N V WNAII Y+ G AL S
Sbjct: 681 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 740
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + PN+VTLV VLSACS G V+KG+ F SM +YG+ P EHY CVVD+
Sbjct: 741 FDQM--IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 798
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAGL+ RA E I+EMP++P VW LL+AC V+ E+G AA +L +L+P DS +
Sbjct: 799 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 858
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A + +W+ DL R++MK+ G+KK G SWI VKN IH F D +H EI
Sbjct: 859 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 918
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L + GY+ D L +++ E+K + HSEK+A++FGL+++P VPI +
Sbjct: 919 EYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVM 978
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KF+S + RE+IVRD RFH F G CSC DYW
Sbjct: 979 KNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 180/395 (45%), Gaps = 4/395 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P + F + A + G+QLH L LK G D +V + +Y G A+
Sbjct: 244 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 303
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F M +R+ T+N I+ G + A++ F + G EPD T + + ACS
Sbjct: 304 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 363
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+QLH + + GF N + L++ Y KC ++ A F +N V W MLV
Sbjct: 364 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + N ++F + E + P + S+L C R+ LELG +H+ +K +
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N +V S L+DMY K G + A + +++V W +I GY D AL++F +M
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + V L +SAC+ A+++G +I ++ G +V L R G
Sbjct: 544 DRGIRS--DEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCG 600
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ +Y ++ I+ W AL++ + G E
Sbjct: 601 KIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 634
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 185/392 (47%), Gaps = 12/392 (3%)
Query: 6 ISPNDFTFPCLF----KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
I PN T L K + +L G++LH+ LK G + + FD Y G
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLD---EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
A K+FDEMPER + TWN I F+ + P+ TF L AC
Sbjct: 97 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156
Query: 122 SDCSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S+ + Q+H ++ G + VCN L+D Y + V LA+ VFDG+ K+ SW
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +N E ++F G+ P + SSVLSAC +I LE+G +H + +K
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +V +ALV +Y G++ AE F+ M +R+ V +N +I G + G+ + A+
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 336
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M E P+ TL ++ ACS G + +G ++ ++ T K G + +++L
Sbjct: 337 FKRMHLDGLE--PDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNL 393
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ ++ A + E + + +W +L A
Sbjct: 394 YAKCADIETALDYFLETEVENVV-LWNVMLVA 424
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 9/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAF-DMYSKT 58
M E ++PN+ TF + +A + +Q+HA L G + D V C+ D+YS+
Sbjct: 137 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG-LRDSTVVCNPLIDLYSRN 195
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G D A ++FD + ++ ++W A IS AI F ++ G P F + L
Sbjct: 196 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 255
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+AC L++G QLHG +++ GF + VCN LV Y + A+ +F + ++ V
Sbjct: 256 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 315
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
++ +++ Q E ++F +G+EP ++S++ AC+ L G+ +HA
Sbjct: 316 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 375
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
K N + AL+++Y KC I+ A F + N+V WN ++ Y G D
Sbjct: 376 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLR 432
Query: 299 SSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+SF M+ E VPN T +L C R G +E G +I +S +K + A + +
Sbjct: 433 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTNFQLNAYVCSVL 491
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+D+ + G +D A++I+ + +S W ++ Y
Sbjct: 492 IDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQY 529
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 14/433 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ T L A SA G+QLHA K G + + + ++Y+K
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A F E N+ WN + L +N+ F ++ P+ T+ + L
Sbjct: 400 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+LG Q+H ++++ F N VC+ L+D Y K ++ A + K+ VSW
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 519
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q ++ F G+ + +++ +SACA + L+ G+ +HA +
Sbjct: 520 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA---Q 576
Query: 241 ACVEG---NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
ACV G ++ +ALV +Y +CG I+++ +AF + + + WNA++ G+ G+ + A
Sbjct: 577 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 636
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M R N T + A S +++G ++ +++ K G E +
Sbjct: 637 LRVFVRMN--REGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAL 693
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPND 416
+ + + G + A + E+ + +S W A++NA Y K G A D+ ++ N
Sbjct: 694 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINA---YSKHGFGSEALDSFDQMIHSNV 749
Query: 417 SGNHVLLSNMFAA 429
NHV L + +A
Sbjct: 750 RPNHVTLVGVLSA 762
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 12/318 (3%)
Query: 106 GGEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G P+ T L C + L GR+LH +++ G D N + L DFY ++
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-A 223
A VFD + ++ +W M+ +F+ E V P + S VL AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
++ +HA + + + V + L+D+Y + G + A F+ + ++ W A
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I G + A+ F +M + +P VLSAC + ++E G ++ + + L
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGI--MPTPYAFSSVLSACKKIESLEIGEQL-HGLVL 275
Query: 344 KYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV--YGKP 399
K G ++ Y C +V L G + A I M R ++ + L+N YG+
Sbjct: 276 KLGF--SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-YNTLINGLSQCGYGEK 332
Query: 400 ELGRIAADNLFKLDPNDS 417
+ +L L+P+ +
Sbjct: 333 AMELFKRMHLDGLEPDSN 350
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 202 TARREGVEPKDFMISSVLSACARIAG-LELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ G+ P + +L C + G L+ GR +H+ +K ++ N + L D Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F++MPER + WN +I A + F M S PN T
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN--VTPNEGTFSG 151
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL AC ++ ++ L G++ ++DL R G VD A + + ++
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211
Query: 381 PTISVWGALLN 391
S W A+++
Sbjct: 212 DH-SSWVAMIS 221
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 351/621 (56%), Gaps = 37/621 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ I P+ F KA + + K++H A + G + DVFVG + Y K
Sbjct: 69 LQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKC 128
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD++ R++ +W + S V G P+ +D F + +G +P+ +T + L A
Sbjct: 129 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 188
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G+++HGF VR G N+ VC+ LV Y KC V A++VFD + ++ VSW
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGV-------------------------------- 208
+L Y +N E E G +FL R+GV
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
Query: 209 ---EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+P + ISS+L AC+ L +G+ +H + G++ +AL+ MY KCG +
Sbjct: 309 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 368
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ M +++V WN +I A G+ AL F++M R + PN VT VLS C
Sbjct: 369 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ--PNSVTFTGVLSGC 426
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S + VE+G++IF SM + ++P A HY+CVVD+ RAG ++ AY+ I+ MPM PT S
Sbjct: 427 SHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASA 486
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL ACRVY EL +I+A LF+++PN+ GN+V L N+ W EA VR MK+
Sbjct: 487 WGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKE 546
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
GI K GCSW+ V N++H F D S+ + +I L +L E+MK AGY PDT++ L D
Sbjct: 547 RGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQD 606
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+++EEK + +HSEK+A+AFG++ + IR+ KNLRICGDCH+A K++S +VG ++
Sbjct: 607 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIV 666
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+ RFH F +G CSC D W
Sbjct: 667 VRDSLRFHHFKNGNCSCKDLW 687
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 145/286 (50%), Gaps = 3/286 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD +P+ + T + IS G AI + +L+ G +PD+ F A AC+
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+++H R G +V V N L+ YGKC V A+ VFD ++ ++ VSW S+
Sbjct: 91 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 150
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
YV+ G +F GV+P +SS+L ACA + L+ G+ +H AV+ +
Sbjct: 151 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGM 210
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N+FV SALV +Y KC S+++A + F+ MP R++V WN ++ Y + S F +
Sbjct: 211 VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLK 270
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
M+ A + T V+ C G E+ +++F M K G KP
Sbjct: 271 MSRDGVRA--DEATWNAVIGGCMENGRSEEAVEMFRKMQ-KMGFKP 313
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN-GCQMFLTARREGVEPKDFMISSVLSACA 223
A+ +FD I + D + CS L+ + + N +++ + + G++P + + ACA
Sbjct: 31 ARQLFDNI-PQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 89
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ VH A + V ++FVG+AL+ YGKC ++ A F+ + R++V W +
Sbjct: 90 VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 149
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+ Y G + F EM + PN +T+ +L AC+ ++ G +I + +
Sbjct: 150 LSSCYVKCGFPRKGMDVFREMGWSGVK--PNPMTVSSILPACAELKDLKSGKEI-HGFAV 206
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++G+ + +V L + V A + MP R +S W +L A
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNGVLTA 254
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/569 (41%), Positives = 337/569 (59%), Gaps = 17/569 (2%)
Query: 30 KQLHALALKSGQIHDVF--VGCSAFDMYSKTGLKDDADKMFDEMPE---RNLATWNAYIS 84
+QLH + G HD + V + YS+ G +A ++F EM E R+ +WNA I
Sbjct: 159 RQLHCFVVVCG--HDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIV 216
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
A+ F + R G + D+ T + L A + L GRQ HG +++SGF G
Sbjct: 217 ACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHG 276
Query: 145 NVSVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE--ENGCQMFL 201
N V +GL+D Y KC + + VF+ I + V W +M+ + YE+ E+G F
Sbjct: 277 NSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGF-SLYEDLSEDGLWCFR 335
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKC 260
+R G P D V SAC+ ++ LG+ VHA+A+K+ V N + V +ALV MY KC
Sbjct: 336 EMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKC 395
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G++ DA F+ MPE N V N++I GYA G +L FE M + + PN +T +
Sbjct: 396 GNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELM--LEKDIAPNSITFIA 453
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VLSAC G VE+G K F M ++ I+P AEHY+C++DLLGRAG + A II+ MP
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFN 513
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
P W LL ACR +G EL AA+ +L+P ++ +V+LSNM+A+ RWEEA V+
Sbjct: 514 PGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVK 573
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN 500
+ M++ G+KK GCSWI + ++H+F A+DTSH EI + K+ ++MK AGY+PD
Sbjct: 574 RLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIR 633
Query: 501 FALY---DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
+AL +VE +E+ + +HSEK+A+AFGLI+ GVPI + KNLRICGDCH+A K IS
Sbjct: 634 WALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLIS 693
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ GRE+ VRD +RFH F +G+CSC DYW
Sbjct: 694 ALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 8/344 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TG 59
M R + + FT + A + + V G+Q H + +KSG + VG D+YSK G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 60 LKDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+ K+F+E+ +L WN IS ++ ++ + F ++R G PD +F
Sbjct: 294 SMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVT 353
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ACS+ S LG+Q+H ++S N VSV N LV Y KC V A+ VFD + + N
Sbjct: 354 SACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNT 413
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHA 236
VS SM+ Y Q+ E ++F + + P +VLSAC +E G+ +
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ + C+E S ++D+ G+ G +++AE MP + W ++G G+ +
Sbjct: 474 MKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVE 533
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+A+ + E + YV L + ++ +R A V++ M+
Sbjct: 534 LAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 43/420 (10%)
Query: 4 ECISPNDF-TFPCLFKASSALHIPVTGKQLHALALKS-------------------GQIH 43
+C P TF L KA A +TGK LHAL KS G +H
Sbjct: 2 QCTYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLH 61
Query: 44 D------------VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+ VF + + Y+K L A ++FDE+P+ ++ ++N I+ G
Sbjct: 62 NAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGE 121
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+ F +R D T + AC D + L RQLH F+V G D SV N
Sbjct: 122 CGPTLRLFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNA 179
Query: 152 LVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++ Y + + A+ VF + + +++VSW +M+V Q+ E +F R G+
Sbjct: 180 VLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGL 239
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAE 267
+ F ++SVL+A + L GR H + +K+ GN VGS L+D+Y KC GS+ +
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECR 299
Query: 268 IAFNKMPERNLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F ++ +LV WN +I G++ ++ ++ L F EM R P+ + VCV SACS
Sbjct: 300 KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREM--QRNGFRPDDCSFVCVTSACS 357
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPG-AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ G ++ +++ +K + +V + + G V A + MP T+S+
Sbjct: 358 NLSSPSLGKQV-HALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSL 416
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
NV N L++ Y K + + +A+ VFD I + VS+ +++ Y E ++F R
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ F +S V++AC GL R +H V + V +A++ Y + G +
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191
Query: 265 DAEIAFNKMPE---RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+A F +M E R+ V WNA+I A+ F EM + + T+ V
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKV--DMFTMASV 249
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR-AGLVDRAYEIIKEMPMR 380
L+A + + G + F+ M +K G + + ++DL + AG + ++ +E+
Sbjct: 250 LTAFTCVKDLVGGRQ-FHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA- 307
Query: 381 PTISVWGALLNACRVY 396
P + +W +++ +Y
Sbjct: 308 PDLVLWNTMISGFSLY 323
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 326/586 (55%), Gaps = 5/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ C + T + A + L G Q+H+LA K+G +V +YSK G
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F E ++ +NA I G + ++ F L +G + T + +
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV 331
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L L +HG+ ++S F + SV L Y K NE+ A+ +FD +K+ SW
Sbjct: 332 SGH---LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y QN E+ +F + P I+ +LSACA++ L LG+ VH +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +I+V +AL+ MY KCGSI +A F+ MP++N V WN +I GY GH AL+
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTI 508
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + P VT +CVL ACS AG V++G +IF SM +YG +P +HYACVVD+
Sbjct: 509 FSEM--LNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDI 566
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + RA + I+ MP++P SVW LL ACR++ L R ++ LF+LDP++ G H
Sbjct: 567 LGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN+ +A + +A VR+ K + K G + I + H+F + D SH + I
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIH 686
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L KL +M+ AGY P+T AL+DVEEEE+ V HSE++A+AFGLIA PG IRI
Sbjct: 687 EKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRII 746
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K IS I R ++VRD NRFH F DG CSC DYW
Sbjct: 747 KNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 212/497 (42%), Gaps = 44/497 (8%)
Query: 6 ISPNDFTFPCLFKASSAL-HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
IS N+F LFK S+++ H+ Q HA + G +D+ + S G A
Sbjct: 18 ISKNNFL--DLFKRSTSISHLA----QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYA 71
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSD 123
+F + ++ +N + + P +++ F +LR+ T +P+ T+ ++A S
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ G +HG + G D + + + +V Y K V A+ VFD + +K+ + W +M
Sbjct: 132 FRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFM-ISSVLSACARIAGLELGRSVHAVAVKAC 242
+ Y +N Q+F E D + +L A A + L LG +H++A K
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ +V + + +Y KCG I+ A F + ++V +NA+I GY G +++LS F+
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM---TLKYGIKPGAEHYACVVD 359
E+ M A TLV ++ V + + Y++ +LK +
Sbjct: 312 EL--MLSGAKLKSSTLVSLV-------PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTT 362
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND--S 417
+ + ++ A ++ E P + ++ W A+++ G E A +LF+ N S
Sbjct: 363 VYSKLNEIESARKLFDESPEK-SLPSWNAMISGYTQNGLTE----DAISLFREMQNSEFS 417
Query: 418 GNHVLLSNMFAA--------TGRWEEADLVRKE-------MKDVGIKKGAGCSWISVKNR 462
N V ++ + +A G+W DLVR + I A C I+ R
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVH-DLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 463 IHIFQAKDTSHERNTEI 479
+ F K NT I
Sbjct: 477 LFDFMPKKNEVTWNTMI 493
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/581 (40%), Positives = 335/581 (57%), Gaps = 2/581 (0%)
Query: 7 SPNDFT-FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
SPN + + + ++ A TG+QLH L SG D + D+Y+ GL A
Sbjct: 58 SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD MP+RN+ WN I G + AI + + G EPD T+ L AC+
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ GR++H ++ + + ++ VC GLVD Y KC V A+ VFD I ++ V W SM+
Sbjct: 178 DLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIA 237
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN + GV P + S +SA A A L GR +H + +
Sbjct: 238 AYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDR 297
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ ++LVDMY K G +Q A + F ++ +R LV WNA+I GY GH D AL F +M
Sbjct: 298 QDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM- 356
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + P+ +T V VLSAC+ G V++ + F M Y IKP +H+ C+VD+LG AG
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAG 416
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ AY++IK MPM+P +WGALLN C+++ ELG +A L +L+P D+GN+VLLSN
Sbjct: 417 RFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSN 476
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A +G+WE+A VRK M + G+KK GCSWI +K + H F D SH R+ EI L +
Sbjct: 477 IYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELER 536
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L M AGY+PDT +DV ++EK + HSE++A+AFGLI+ P G + +TKNLR+
Sbjct: 537 LEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRV 596
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH K IS IV RE+I+RD NR+H F +G CSC DYW
Sbjct: 597 CEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 166/344 (48%), Gaps = 14/344 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FT+P KA +AL TG+++H L + D+FV DMY+K G DDA
Sbjct: 159 VEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDAR 218
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD + R+ WN+ I+ GRP A+ ++ G P + T + ++A +D +
Sbjct: 219 AVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAA 278
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR+LHGF R GFD + LVD Y K V +A+V+F+ ++ + VSW +M+
Sbjct: 279 ALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMIC 338
Query: 186 VYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSAC-----ARIAGLELGRSVHAVAV 239
Y + + ++F R E V P + VLSAC + A G V ++
Sbjct: 339 GYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSI 398
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
K V+ + LVD+ G G ++A MP + + W A++ G + ++
Sbjct: 399 KPTVQHF----TCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGE 454
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+ +++ + E NYV L + +++G EK ++ MT
Sbjct: 455 LALQKLIELEPEDAGNYVLLSNIY---AQSGKWEKAARVRKLMT 495
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 325/550 (59%), Gaps = 41/550 (7%)
Query: 37 LKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
+ + DVF + Y++ G+ ++A ++FD MPERN +WNA ++
Sbjct: 122 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVA------------ 169
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
A+I R +L + C NV+ N ++ Y
Sbjct: 170 -AYIQRRMMDEAKELFN----MMPCR----------------------NVASWNTMLTGY 202
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
+ + AK VFD + K+ VSW +ML Y Q E Q+F+ R G +
Sbjct: 203 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFA 262
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
VLS CA IA LE G +H ++A FVG+AL+ MY KCG+++DA AF +M ER
Sbjct: 263 CVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEER 322
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V WN +I GYA G AL F+ M + + P+ +TLV VL+ACS +G VEKG+
Sbjct: 323 DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK--PDDITLVGVLAACSHSGLVEKGIS 380
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
FYSM +G+ EHY C++DLLGRAG + A++++K+MP P ++WGALL A R++
Sbjct: 381 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSW 456
PELGR AA+ +F+L+P ++G +VLLSN++A++G+W +A +R M++ G+KK G SW
Sbjct: 441 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 500
Query: 457 ISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVG 516
I V+N++H F A D H +I A L L MK AGY+ T+ L+DVEEEEK +
Sbjct: 501 IEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLK 560
Query: 517 HHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFW 576
+HSEK+A+A+G++ IPPG PIR+ KNLR+CGDCH+AFK+IS I GR +++RD+NRFH F
Sbjct: 561 YHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFR 620
Query: 577 DGYCSCSDYW 586
G CSC DYW
Sbjct: 621 GGSCSCGDYW 630
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 20/336 (5%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
++ GL A FD PE++ +WN ++ V GR + A F + RT E D+I++
Sbjct: 16 HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS--RT--EWDVISW 71
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A ++ + R+L F G D V N +V Y + ++ A+ +FD
Sbjct: 72 NALMSGYVQWGKMSEAREL--FDRMPGRD--VVSWNIMVSGYARRGDMVEARRLFDAAPV 127
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +W +++ Y QN E ++F P+ +S A I + +
Sbjct: 128 RDVFTWTAVVSGYAQNGMLEEARRVF------DAMPERNAVSWNAMVAAYIQRRMMDEAK 181
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ C N+ + ++ Y + G +++A+ F+ MP+++ V W A++ Y+ G +
Sbjct: 182 ELFNMMPC--RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 239
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ L F EM RC N CVLS C+ A+E GM++ + ++ G G
Sbjct: 240 EETLQLFIEMG--RCGEWVNRSAFACVLSTCADIAALECGMQL-HGRLIRAGYGVGCFVG 296
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ + + G ++ A +EM R +S W ++
Sbjct: 297 NALLAMYFKCGNMEDARNAFEEMEERDVVS-WNTMI 331
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F C+ + + G QLH +++G FVG + MY K G +DA F
Sbjct: 257 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 316
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER++ +WN I+ G K A++ F +R T +PD IT L ACS L++
Sbjct: 317 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 376
Query: 129 LG 130
G
Sbjct: 377 KG 378
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 38/253 (15%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ + V LA+ FD +K+ VSW ML YV+N E +F + V
Sbjct: 10 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 210 PKDFMISSVLSACARIAGLEL-----GRSVHAVAVKACVEG------------------- 245
+ ++S + EL GR V V+ V G
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMPGRDV--VSWNIMVSGYARRGDMVEARRLFDAAPV 127
Query: 246 -NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++F +A+V Y + G +++A F+ MPERN V WNA++ Y + D A F M
Sbjct: 128 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 187
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
C V ++ T+ L+ ++AG +E+ +F +M K + +A ++ +
Sbjct: 188 P---CRNVASWNTM---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQG 236
Query: 365 GLVDRAYEIIKEM 377
G + ++ EM
Sbjct: 237 GCSEETLQLFIEM 249
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ ++ Y + G +++A FN E +++ WNA++ GY G A F+ M
Sbjct: 41 NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGR--- 97
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+ V+ ++S +R G + + ++F + ++ + VV + G+++ A
Sbjct: 98 ---DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT-----WTAVVSGYAQNGMLEEA 149
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP--NDSGNHVLLSNMFA 428
+ MP R +S W A++ A Y + + A LF + P N + + +L+ +A
Sbjct: 150 RRVFDAMPERNAVS-WNAMVAA---YIQRRM-MDEAKELFNMMPCRNVASWNTMLTG-YA 203
Query: 429 ATGRWEEADLVRKEM 443
G EEA V M
Sbjct: 204 QAGMLEEAKAVFDTM 218
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 337/608 (55%), Gaps = 35/608 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP L KA + G+Q+H LK G D++V S MY K G +DA
Sbjct: 101 PNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKV 160
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
KMFDE+P +++ +WNA IS G K A+
Sbjct: 161 FDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEAL 220
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T +PD T L+AC+ + ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 221 ELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F+G+ K+ +SW +++ Y + +F R G P + +
Sbjct: 281 IKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTML 340
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K V + ++L+DMY KCG I+ A+ F+ M
Sbjct: 341 SILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSML 400
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G ++ G
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE--PDDITFVGLLSACSHSGMLDLG 458
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF SMT Y I P EHY C++DLLG +GL A E+I M M P +W +LL AC+
Sbjct: 459 RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACK 518
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G ELG A NL K++P +SG++VLLSN++A GRW E R + D G+KK GC
Sbjct: 519 MHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGC 578
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 579 SSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 638
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 639 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 698
Query: 575 FWDGYCSC 582
F DG CSC
Sbjct: 699 FXDGVCSC 706
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKMFDEMPERNLATWNAYISNAV 87
+HA +K+G +H+ S +S D A +FD + E NL WN
Sbjct: 21 IHAKMIKTG-LHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHA 79
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
L P +A+ ++ + G P+ TF L AC+ + G+Q+HG +++ G D ++
Sbjct: 80 LSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLY 139
Query: 148 VCNGLVDFYGKCNE-------------------------------VGLAKVVFDGIIDKN 176
V L+ Y K + A+ +FD I K+
Sbjct: 140 VHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKD 199
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ Y + + ++F + V+P + + +VLSACA+ A +ELGR VH+
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
N+ + +AL+D+Y KCG ++ A F + ++++ WN +IGGY H
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPGAEHY 354
AL F+EM +R PN VT++ +L AC+ GA++ G + ++ LK G+ +
Sbjct: 320 ALLLFQEM--LRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-GVSNPSSLR 376
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
++D+ + G ++ A ++ M R ++S W A++ ++G+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNR-SLSSWNAMIFGFAMHGR 419
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 156/337 (46%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+Y K G
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ A+ VFD +++++
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + +F R++G+EP D +LSAC+ L+LGR + ++
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M + + V W +++ G+ ++
Sbjct: 466 TEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVEL 525
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
S + + + + +YV L + + R V K
Sbjct: 526 GESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAK 562
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY---GKCNEVGLAKVVFDGIID 174
L+ +C LQ R +H ++++G + L++F + + A VFD I +
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +M + + + + +++ G+ P + +L ACA+ G+ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K + +++V ++L+ MY K G +DA F++ R++V + A+I GYA G+
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185
Query: 295 DMALSSFEEM-----------------------------TSMRCEAVPNYVTLVCVLSAC 325
A F+E+ M+ P+ T+V VLSAC
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++ ++E G ++ +S +G + ++DL + G V+ A + + + + IS
Sbjct: 246 AQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS- 303
Query: 386 WGALL 390
W L+
Sbjct: 304 WNTLI 308
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/612 (37%), Positives = 349/612 (57%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FTFP L KA+S L TGK H + +K DVF+ S Y+K G ++
Sbjct: 134 PDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRV 193
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F +P R++ +WN+ I+ V GG P+ A++ F + +P+ IT L+AC+ S
Sbjct: 194 FVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ GR +H ++ R+ ++++ N ++D Y KC V AK +FD + +K+ VSW +MLV Y
Sbjct: 254 EFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313
Query: 188 ---------------------------VQNYEE----ENGCQMFLTAR-REGVEPKDFMI 215
+ YE+ + ++F + + +P + +
Sbjct: 314 AKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL 373
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
S LSACA++ ++LG +H K ++ N + ++L+DMY KCG +Q A + F+ +
Sbjct: 374 VSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVER 433
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+++ W+A+I G A GH A++ F +M + + PN VT +L ACS G VE+G
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVK--PNAVTFTNILCACSHVGLVEEGR 491
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F M L YG+ PG +HYAC+VD+LGRAGL++ A E+I++MPM P SVWGALL AC +
Sbjct: 492 TFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTI 551
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ L A L +L+P + G +VLLSN++A G+W+ +RK M+DVG+KK GCS
Sbjct: 552 HENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCS 611
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-KMTE 514
I V +H F D SH +I A L ++ ++ GY+P+ + L VEEE+ K
Sbjct: 612 SIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQA 671
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+AFGLI+ PIRI KNLR+CGDCHS K +S + RE+++RD RFH
Sbjct: 672 LFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHH 731
Query: 575 FWDGYCSCSDYW 586
F +G+CSC DYW
Sbjct: 732 FREGHCSCMDYW 743
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 196/404 (48%), Gaps = 41/404 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
KQ+HA L++G D F SA + + L D A ++FD++P NL TWN I
Sbjct: 52 KQIHAQMLRTGLFFDPF---SASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 85 NAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
P ++ F+ L ++ PD TF + A S+ L G+ HG +++
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+V + N L+ FY KC E+GL VF I ++ VSW SM+ +VQ E ++F
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ V+P + VLSACA+ + E GR VH+ + + ++ + +A++DMY KCGS+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS----------------- 306
+DA+ F+KMPE+++V W ++ GYA G D A F+ M +
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 307 -------------MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ A P+ VTLV LSAC++ GA++ G I + K G+K
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK-KQGMKLNCHL 407
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ + G + +A + + R + VW A++ ++G
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMHG 450
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 167/368 (45%), Gaps = 39/368 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN T + A + G+ +H+ ++ + + + DMY+K G
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287
Query: 61 KDDADKMFDEMPER-------------------------------NLATWNAYISNAVLG 89
+DA ++FD+MPE+ ++A WNA IS
Sbjct: 288 VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQC 347
Query: 90 GRPKNAIDAFINLRRT-GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+PK A++ F L+ + +PD +T + L+AC+ + LG +H ++ + G N +
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHL 407
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y KC ++ A +VF + K+ W +M+ + ++ +F + + V
Sbjct: 408 TTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV 467
Query: 209 EPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P +++L AC+ + +E GR+ + + + V + + +VD+ G+ G +++A
Sbjct: 468 KPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 527
Query: 268 IAFNKMPERNLV-CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSAC 325
KMP W A++G A H ++ L+ E+ S E P N+ V + +
Sbjct: 528 ELIEKMPMAPAASVWGALLG--ACTIHENVVLA--EQACSQLIELEPGNHGAYVLLSNIY 583
Query: 326 SRAGAVEK 333
++AG ++
Sbjct: 584 AKAGKWDR 591
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/562 (39%), Positives = 332/562 (59%), Gaps = 7/562 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H+ ++K G ++FV D+Y++ G D K+FD M R+L +WN+ I L
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVS 147
+P AI F +R + +PD +T + + S ++ R + GF +R G F +++
Sbjct: 326 NEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDIT 385
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ N +V Y K V A+ VF+ + +K+ +SW +++ Y QN +M+ EG
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 208 --VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+ SVL AC++ L G +H +K + ++FVG++L DMYGKCG + D
Sbjct: 446 GEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDD 505
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSA 324
A F ++P N V WN +I + GH + A+ F+EM E V P+++T V +LSA
Sbjct: 506 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD---EGVKPDHITFVTLLSA 562
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G V++G F M YGI P +HY C+VDL GRAG ++ A IK MP++P S
Sbjct: 563 CSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDAS 622
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+WGALL+ACRV+G +LG+IA+++LF+++P G HVLLSNM+A+ G+WE D +R
Sbjct: 623 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITS 682
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
G++K G S + V N++ +F + +H E+ LT L E++K GY+PD F L
Sbjct: 683 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQ 742
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DVE++EK + HSE++A+AF LI P IRI KNLR+CGDCHS KFIS I RE+
Sbjct: 743 DVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 802
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
IVRD+NRFH F +G CSC DYW
Sbjct: 803 IVRDSNRFHHFKNGVCSCGDYW 824
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 26/383 (6%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
LF+ + L + K LHA + S I +V + ++Y G A FD + R+
Sbjct: 60 LFRYCTNLQ---SAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRD 116
Query: 76 LATWNAYISNAVLGGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
+ WN IS G I F + + +G +PD TF + L AC + + G ++H
Sbjct: 117 VYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIH 173
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
++ GF +V V L+ Y + V A+++FD + ++ SW +M+ Y Q+ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAK 233
Query: 195 NGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+ +G+ D + S+LSAC G ++H+ ++K +E +FV + L
Sbjct: 234 EALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+D+Y + GS++D + F++M R+L+ WN+II Y A+ F+EM R + P
Sbjct: 289 IDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQ--P 346
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG-----IKPGAEHYACVVDLLGRAGLVD 368
+ +TL+ + S S+ G + + + TL+ G I G VV + + GLVD
Sbjct: 347 DCLTLISLASILSQLGEI-RACRSVQGFTLRKGWFLEDITIG----NAVVVMYAKLGLVD 401
Query: 369 RAYEIIKEMPMRPTISVWGALLN 391
A + +P + IS W +++
Sbjct: 402 SARAVFNWLPNKDVIS-WNTIIS 423
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 142/277 (51%), Gaps = 12/277 (4%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
C+ LQ + LH LV S NV + LV+ Y V LA+ FD I +++ +W M
Sbjct: 64 CTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLM 123
Query: 184 LVVYVQ-NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
+ Y + Y E L G++P SVL AC + G +H +A+K
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFG 180
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+++V ++L+ +Y + G++ +A I F++MP R++ WNA+I GY G+A AL+ +
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+ +M + VT+V +LSAC+ AG +G+ I +S ++K+G++ ++DL
Sbjct: 241 GLRAM------DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYA 293
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
G + ++ M +R IS W +++ A + +P
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLIS-WNSIIKAYELNEQP 329
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
IS N T+ + A S G +LH LK+G DVFVG S DMY K G DDA
Sbjct: 448 ISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDAL 507
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F ++P N WN I+ G + A+ F + G +PD ITF L+ACS
Sbjct: 508 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 567
Query: 126 LLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS-WCSM 183
L+ G + G ++ +VD YG+ ++ +A + + D S W ++
Sbjct: 568 LVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGAL 627
Query: 184 L 184
L
Sbjct: 628 L 628
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 8/209 (3%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ G E K+ I V + L+ + +HA V + N+ + + LV++Y G++
Sbjct: 46 KNGNESKE--IDDVHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVA 103
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F+ + R++ WN +I GY G++ + F + + P+Y T VL A
Sbjct: 104 LARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCF-SLFMLSSGLQPDYRTFPSVLKA 162
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C V G KI + + LK+G A ++ L R G V A + EMP R S
Sbjct: 163 CRN---VTDGNKI-HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS 218
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLD 413
W A+++ G + +D L +D
Sbjct: 219 -WNAMISGYCQSGNAKEALTLSDGLRAMD 246
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 326/561 (58%), Gaps = 6/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYS---KTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQL A A+K+ D+ V + S T A +FD++P+ ++ +N
Sbjct: 37 KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
P A F + +G PD TF + L AC+ C L+ GRQLH ++ G NV
Sbjct: 97 ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC L++ Y CNE+ A+ VFD I + V++ +M+ Y + +F +
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQAR 216
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++P D + SVLS+CA + L+LG+ +H K + V +AL+DMY KCGS+ DA
Sbjct: 217 NLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDA 276
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M R+ W+A+I YA GH A+S F+EM E P+ +T + +L ACS
Sbjct: 277 VCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE--PDEITFLGLLYACS 334
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G VE+G + FY M KYG+ PG +HY C+VDLLGRAG ++ AYE I +P+RPT +W
Sbjct: 335 HTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILW 394
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL+AC +G ELG+ + +F+LD + G++++LSN+ A GRWE+ + VRK M +
Sbjct: 395 RTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNER 454
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-D 505
G+ K GCS + V N +H F + D H +T++ L +L +E+K GY+P+T+ + D
Sbjct: 455 GVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHAD 514
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+E+EEK + +HSEK+A+ FGL+ PPG IR+ KNLR+CGDCHSA K IS I R++I
Sbjct: 515 MEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQII 574
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD RFH F DG CSC DYW
Sbjct: 575 LRDVQRFHHFKDGKCSCEDYW 595
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 5/327 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D+TFP L KA ++ G+QLH LA+K G +V+V + +MY+ D A ++
Sbjct: 119 PDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRV 178
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++ E + T+NA I+ G RP A+ F L+ +P +T + L++C+ L
Sbjct: 179 FDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGAL 238
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG+ +H ++ ++GF+ V V L+D Y KC + A VF+ + ++ +W +M++ Y
Sbjct: 239 DLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAY 298
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGN 246
+ +F R+ G EP + +L AC+ +E G + + K V
Sbjct: 299 AIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPG 358
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
I +VD+ G+ G +++A +P R + W ++ G+ ++ E++
Sbjct: 359 IKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIF 418
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +Y+ L + C+RAG E
Sbjct: 419 ELDDSHGGDYIILS---NLCARAGRWE 442
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P D T + + + L GK +H K+G V V + DMY+K G DDA
Sbjct: 218 LKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAV 277
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ M R+ W+A I + G A+ F +R+ G EPD ITF L ACS
Sbjct: 278 CVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTG 337
Query: 126 LLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G + +G + G + +VD G+ + A G+ I + W ++
Sbjct: 338 LVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTL 397
Query: 184 L 184
L
Sbjct: 398 L 398
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 335/586 (57%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SP+ T+ L G ++H L +G D F+ MYS G D A K
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDC 124
+FD+ +R + WNA L G + + + + R G E D T+ L AC S+C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 125 SL--LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ L G+++H L R G++ +V + LVD Y + V A VF+G+ +N VSW +
Sbjct: 194 TADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSA 253
Query: 183 MLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N + + F + + P + SVL ACA +A LE GR +H ++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILR 313
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V SALV MYG+CG + + F++M +R++V WN++I Y G+ A+
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQI 373
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + A P VT V VL ACS G VE+G ++F SM +GIKP EHYAC+VDL
Sbjct: 374 FEEM--LANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDL 431
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA +D A +++++M P VWG+LL +CR++G EL A+ LF L+P ++GN+
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL++++A W+E V+K ++ G++K G W+ V+ +++ F + D + +I
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIH 551
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L KL E+MK GYIP T LY++E EEK V HSEK+ALAFGLI G PIRIT
Sbjct: 552 AFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRIT 611
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH KFIS + +E++VRD NRFHRF +G CSC DYW
Sbjct: 612 KNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 7/209 (3%)
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+Q+ +E + L + P ++ C + L G VH + + +
Sbjct: 53 IQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDP 112
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+ + L+ MY GS+ A F+K +R + WNA+ GH + L + +M +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 308 RCEA---VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E+ YV CV S C+ A + KG +I +T + G +VD+ R
Sbjct: 173 GVESDRFTYTYVLKACVASECT-ADHLTKGKEIHAHLT-RRGYNSHVYIMTTLVDMYARF 230
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G VD A + MP+R +S W A++ AC
Sbjct: 231 GCVDYASYVFNGMPVRNVVS-WSAMI-AC 257
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 337/565 (59%), Gaps = 10/565 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+QLH LA++SG D F + MY+ DA K FDE+P N A S V
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG--RQLHGFLVRSGFDGN 145
++ F L +G + A + + + G LH +V++G DG+
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 146 VSVCNGLVDFYGKC--NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--L 201
V N ++D Y K ++G A+ VFD ++K+ VSW SM+ +Y QN + ++ +
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
++ +S++L ACA ++ G+ +H V+ +E N++VG+++VDMY KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
++ A AF K+ E+N++ W+A+I GY GH AL F EM R PNY+T + V
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMC--RSGQNPNYITFISV 404
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L+ACS AG ++KG + +M ++GI+PG EHY C+VDLLGRAG +D AY +IKEM ++P
Sbjct: 405 LAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
++WGALL+ACR++ EL I+A LF+LD + G +VLLSN++A G W++ + +R
Sbjct: 465 DAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRV 524
Query: 442 EMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNF 501
+K GI+K G S + +K R H+F D SH ++ EI + L KL E+M+ AGY+P+T
Sbjct: 525 LVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGS 584
Query: 502 ALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVG 561
L+D++EEEK + + HSEK+A+AF L+ PG I + KNLR+C DCH+A K I+ I
Sbjct: 585 VLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQ 644
Query: 562 REVIVRDNNRFHRFWDGYCSCSDYW 586
RE+IVRD RFH F DG CSC DYW
Sbjct: 645 REIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 9/331 (2%)
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P R A+W+A + + + G P A+ AF R A + + L GR
Sbjct: 51 PSRP-ASWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAAATSLAAGR 109
Query: 132 QLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
QLH +RSG F + + L+ Y C+ A+ FD I N V +M YV+N
Sbjct: 110 QLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRN 169
Query: 191 YEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+F L A + SA ARI + S+HA+ VK ++G+
Sbjct: 170 NLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAG 229
Query: 249 VGSALVDMYGKCG--SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V + ++D Y K G + A F+ M E+++V WN++I YA G + AL + +M +
Sbjct: 230 VVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLN 288
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ N VTL +L AC+ AG ++ G K ++ ++ G++ VVD+ + G
Sbjct: 289 VSGSIKCNAVTLSAILLACAHAGTIQTG-KCIHNQVVRMGLEENVYVGTSVVDMYSKCGR 347
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V+ A + +++ + +S W A++ ++G
Sbjct: 348 VEMARKAFQKIKEKNILS-WSAMITGYGMHG 377
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I N T + A + TGK +H ++ G +V+VG S DMYSK G + A
Sbjct: 293 IKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMAR 352
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K F ++ E+N+ +W+A I+ + G + A+D F + R+G P+ ITF + L ACS
Sbjct: 353 KAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAG 412
Query: 126 LLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGK 158
LL GR + + R G + V +VD G+
Sbjct: 413 LLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGR 446
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 362/652 (55%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ + P FT + + +A GK++H+ +K G V V S +MY+KTG
Sbjct: 98 MVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGD 157
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
A +FD M RN ++WNA IS N+++ G ++
Sbjct: 158 LKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQH 217
Query: 95 AID----AFIN--LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
D F + L+ T +PD + + L+AC++ L G+Q+HG++VR+ FD + +V
Sbjct: 218 GFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAV 277
Query: 149 CNGLVDFYGKCNEVGLAK---------------------------------VVFDGIIDK 175
N L+ Y K V +A+ +F+ + D
Sbjct: 278 GNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDP 337
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V YVQN + ++F T EG P F ++++LSA + + L G+ +H
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHA 294
A A+++ + VG+AL MY K GSI A FN + + R+ V W ++I A G
Sbjct: 398 ASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLG 457
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FE+M ++ + P+++T V VLSAC+ G VE+G F M + I P HY
Sbjct: 458 EEAIELFEQMLTLGIK--PDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHY 515
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDL GRAGL+ AY+ ++ MPM P + WG+LL++C+VY +L ++AA+ L ++P
Sbjct: 516 ACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEP 575
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
N+SG + L+N++++ G+W++A +RK MK G+KK G SW+ ++N+ H+F +D H
Sbjct: 576 NNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHP 635
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ EI M+ K+ +E+K G+ PDT L+D+E E K + +HSEK+A+AFG+I+ P
Sbjct: 636 QKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPEN 695
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCH+A KFIS +V RE+IVRD RFH F DG CSC DYW
Sbjct: 696 TTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 202/484 (41%), Gaps = 105/484 (21%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+K G + A ++FD +P R+ +W I GR ++AI F+++ + P T
Sbjct: 51 YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTL 110
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L +C+ +G+++H F+V+ G V V N L++ Y K ++ +AKVVFD +
Sbjct: 111 TNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL 170
Query: 175 KNDVSWCSMLVVYV-------------------------------QNYEEENGCQMFLTA 203
+N SW +M+ +++ Q+ + Q F +
Sbjct: 171 RNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSI 230
Query: 204 RRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
++ ++P F ++S LSACA + L G+ +H V+ + + VG+AL+ MY K G
Sbjct: 231 LKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGG 290
Query: 263 IQ---------------------------------DAEIAFNKMPERNLVCWNAIIGGYA 289
++ A FN + + ++V W A+I GY
Sbjct: 291 VEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYV 350
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI------------ 337
G + A+ F+ M S PN TL +LSA S ++ G +I
Sbjct: 351 QNGLNNDAIEVFKTMVSEGPR--PNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALS 408
Query: 338 ------FYSMTLKYGIKPGAEH-------------YACVVDLLGRAGLVDRAYEIIKEM- 377
+M K G GA + ++ L + GL + A E+ ++M
Sbjct: 409 PSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQML 468
Query: 378 --PMRPTISVWGALLNACRVYGKPELGRIAAD---NLFKLDPNDSGNHVLLSNMFAATGR 432
++P + +L+AC G E GR D N+ K+DP S ++ + ++F G
Sbjct: 469 TLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLS-HYACMVDLFGRAGL 527
Query: 433 WEEA 436
+EA
Sbjct: 528 LQEA 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ Y K ++ A VFD I ++ VSW +++V Y Q E+ ++F+ ++ V
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F +++VL++CA +G+ VH+ VK + + V ++L++MY K G ++ A++
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M RN WNA+I + + G D+AL+ FE ++ + V+ +++ C++ G
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSE------RDIVSWNSMIAGCNQHG 218
Query: 330 AVEKGMKIFYSMTLKYGIKP 349
+ ++ F S+ +KP
Sbjct: 219 FDNEALQFFSSILKDTSLKP 238
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA- 297
VK + ++++ + L+++Y K G DA FN+MP + WN I+ GYA QG + A
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 298 -----------------------LSSFEEMTSMRCEAV-----PNYVTLVCVLSACSRAG 329
+ FE+ + + V P TL VL++C+ G
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ G K+ +S +K G+ ++++ + G + A + M +R T S W A+
Sbjct: 122 SRGIGKKV-HSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNT-SSWNAM 179
Query: 390 LNACRVYGKPELG 402
++ G+ +L
Sbjct: 180 ISLHMNCGRVDLA 192
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 338/605 (55%), Gaps = 32/605 (5%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T + K SS+ GKQ+H +K G + VG DMYSK G DA K+F +
Sbjct: 138 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGL 197
Query: 72 PERNL------------------------------ATWNAYISNAVLGGRPKNAIDAFIN 101
+RN +W+A I G K AI+ F
Sbjct: 198 DDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFRE 257
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
++ G + D F + L AC + GRQ+H ++R+ ++ V + L+D Y KC
Sbjct: 258 MKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKC 317
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ AK VFD + KN VSW +M+V Y Q ++FL +R G++P + + +SA
Sbjct: 318 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISA 377
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA I+ LE G H A+ A + I V ++LV +YGKCG I D+ FN+M R+ V W
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
A++ YA G A A+ F++M + + P+ VTL V+SACSRAG VEKG + F M
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLK--PDGVTLTGVISACSRAGLVEKGQRYFELM 495
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
+YGI P HY+C++DL R+G ++ A I MP RP W LL+ACR G E+
Sbjct: 496 INEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEI 555
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
G+ AA++L +LDP+ + LLS+++A+ G+W+ +R+ MK+ ++K G SWI K
Sbjct: 556 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKG 615
Query: 462 RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
++H F A D S + +I A L +L +++ GY PDT+F +DVEE K+ + HSE+
Sbjct: 616 KLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSER 675
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+AFGLI +P G+PIR+ KNLR+C DCH+A K IS + GRE++VRD RFHRF DG CS
Sbjct: 676 LAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCS 735
Query: 582 CSDYW 586
C D+W
Sbjct: 736 CGDFW 740
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 201/422 (47%), Gaps = 48/422 (11%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLIT 113
YSK+G + ++ F+++P+R+ TWN I L G A+ A+ + + +T
Sbjct: 79 YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVT 138
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L S + LG+Q+HG +++ GF+ + V + L+D Y K + AK VF G+
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198
Query: 174 DKN------------------------------DVSWCSMLVVYVQNYEEENGCQMFLTA 203
D+N VSW +M+ QN E+ + F
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM 258
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ EG++ + SVL AC + + GR +HA ++ ++ +I+VGSAL+DMY KC +
Sbjct: 259 KIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCL 318
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A+ F++M ++N+V W A++ GY G A A+ F +M R P++ TL +S
Sbjct: 319 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDM--QRSGIDPDHYTLGQAIS 376
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPM 379
AC+ ++E+G + F+ I G HY V V L G+ G +D + + EM +
Sbjct: 377 ACANISSLEEGSQ-FHGKA----ITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV 431
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
R +S W A+++A +G+ D + +L G V L+ + +A R A LV
Sbjct: 432 RDEVS-WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDG--VTLTGVISACSR---AGLV 485
Query: 440 RK 441
K
Sbjct: 486 EK 487
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 168/342 (49%), Gaps = 7/342 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + + + F + A L G+Q+HA +++ ++VG + DMY K
Sbjct: 258 MKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKC 317
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M ++N+ +W A + GR A+ F++++R+G +PD T ++A
Sbjct: 318 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISA 377
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ S L+ G Q HG + +G ++V N LV YGKC ++ + +F+ + +++VSW
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q Q+F + G++P ++ V+SAC+R +E G+ + +
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497
Query: 241 --ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMA 297
V N S ++D++ + G I++A N MP R + + W ++ ++G+ ++
Sbjct: 498 EYGIVPSNGHY-SCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIG 556
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ E + + Y L + ++ + + +GMK
Sbjct: 557 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMK 598
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 143/358 (39%), Gaps = 56/358 (15%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+ +HG ++R+ + N +V Y A+ VFDGI N SW ++L+ Y ++
Sbjct: 23 KMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKS 82
Query: 191 YEEENGCQMF-LTARREGVE------------------------PKDF-------MISSV 218
+ F R+GV KDF + ++
Sbjct: 83 GHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTM 142
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L + + LG+ +H +K E + VGS L+DMY K G I DA+ F + +RN
Sbjct: 143 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNT 202
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V +N ++GG G + AL F M + V+ ++ ++ G ++ ++ F
Sbjct: 203 VMYNTLMGGLLACGMIEDALQLFRGMEK-------DSVSWSAMIKGLAQNGMEKEAIECF 255
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI---IKEMPMRPTISVWGALLN---- 391
M ++ G+K + V+ G G ++ +I I ++ I V AL++
Sbjct: 256 REMKIE-GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCK 314
Query: 392 -ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
C Y K R+ N+ G + TGR EA + +M+ GI
Sbjct: 315 CKCLHYAKTVFDRMKQKNVVSWTAMVVG--------YGQTGRAGEAVKIFLDMQRSGI 364
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 328/559 (58%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ + ++ Y K +DA K+ DEMPE+N+ +W A IS
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F + R+ G+P+ TF L +C S L LG+Q+HG +V+ +D ++ V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K ++ A+ +F+ + +++ VS +++ Y Q +E +MF EG+
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +S+L+A + +A L+ G+ H ++ + + ++L+DMY KCG++ A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER + WNA++ GY+ G L F M + P+ VTL+ VLS CS
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK-RVKPDAVTLLAVLSGCSHG 369
Query: 329 GAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ G+ IF M +YG KPG EHY C+VD+LGRAG +D A+E IK MP +PT V G
Sbjct: 370 RMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 429
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV+ ++G L +++P ++GN+V+LSN++A+ GRW + + VR M
Sbjct: 430 SLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKA 489
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SWI + +H F A D +H R E+ A + ++ +MK AGY+PD + LYDV+
Sbjct: 490 VTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVD 549
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + HSEK+AL FGLIA G+PIR+ KNLRIC DCH+ K S + REV +R
Sbjct: 550 EEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLR 609
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH+ DG CSC DYW
Sbjct: 610 DKNRFHQIVDGICSCGDYW 628
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 164/316 (51%), Gaps = 8/316 (2%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+A + + G E + A LNAC D L+ G+++H ++++ + + L+ FY
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
GKC+ + A+ V D + +KN VSW +M+ Y Q +F R +P +F +
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+VL++C R +GL LG+ +H + VK + +IFVGS+L+DMY K G I++A F +PER
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V AII GYA G + AL F + S PNYVT +L+A S ++ G K
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS--PNYVTYASLLTALSGLALLDHG-K 274
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ L+ + A ++D+ + G + A + MP R IS W A+L Y
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS-WNAMLVG---Y 330
Query: 397 GKPELGRIAADNLFKL 412
K LGR + LF+L
Sbjct: 331 SKHGLGREVLE-LFRL 345
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ E +SPN T+ L A S L + GKQ H L+ + S DMYSK G
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAFLN 119
A ++FD MPER +WNA + G + ++ F +R +PD +T A L+
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 120 ACSDCSLLQLGRQLHGFLVRSG---FDGNVS 147
CS HG + +G FDG V+
Sbjct: 365 GCS-----------HGRMEDTGLNIFDGMVA 384
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/594 (40%), Positives = 343/594 (57%), Gaps = 12/594 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + FTF + A H+ + +QLH+LA SG V V S YSK G+
Sbjct: 131 MREMGLVMDGFTFSGVITACCN-HVGLI-RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 61 KDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
++A+ +F+ M E R+ +WN+ I R A+ + ++ G E D+ T + L
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE-VGLAKVVFDGIIDKND 177
S L G Q H +++GF+ N V +GL+D Y KC + ++ VF+ I +
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDL 308
Query: 178 VSWCSMLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V W +M+ Y QN E + F +R G P D +SAC+ ++ G+ HA
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHA 368
Query: 237 VAVKACVEGN-IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+A+K+ + N I V +ALV MY KCG++QDA F +MP+ N V N+II GYA G
Sbjct: 369 LAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
+L+ FE+M + P +TLV +LSAC+ G VE+G K F M +GI+P AEHY+
Sbjct: 429 ESLNLFEQM--LAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYS 486
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C++DLLGRAG + A +I MP P + W ALL ACR YG EL AA+ +L+P
Sbjct: 487 CMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPT 546
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
++ +++L++M++A +WEEA +RK M+D GI+K GCSWI + R+H+F A+D SH R
Sbjct: 547 NAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPR 606
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALY---DVEEEEKMTEVGHHSEKIALAFGLIAIP 532
EI L ++ +MK AGY+PD +A + E+EK + HHSEK+A+AFGL+
Sbjct: 607 IKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTK 666
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G P+ + KNLRICGDCH+A KF+S I R++ VRD RFH F DG CSC DYW
Sbjct: 667 HGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 224/483 (46%), Gaps = 52/483 (10%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKS-----------------------------GQI 42
+F + K+ A +TGK LH + LKS Q
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 43 HD--VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFI 100
H+ VF + Y+K L A +FD++P+ +L ++N I+ G +A+ F
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
+R G D TF + AC C+ + L RQLH SGFD VSV N L+ +Y K
Sbjct: 130 EMREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 161 EVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
+ A++VF+G+ + +++VSW SM+V Y Q+ ++ G E F ++SV
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS-IQDAEIAFNKMPERN 277
L+ + + L G HA A+K N VGS L+DMY KCG+ + ++ F ++ +
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307
Query: 278 LVCWNAIIGGYAHQGHADM-ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
LV WN +I GY+ + AL F +M R P+ + VC +SACS + +G K
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQM--QRAGYWPDDCSFVCAISACSNLSSPSQG-K 364
Query: 337 IFYSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F+++ +K I +V + + G + A ++ + MP T+++ +
Sbjct: 365 QFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG---- 420
Query: 396 YGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAA---TGRWEEADLVRKEMKDV-GIK 449
Y + +G + NLF+ L + + + L ++ +A TGR EE MKD+ GI+
Sbjct: 421 YAQHGIG-TESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIE 479
Query: 450 KGA 452
A
Sbjct: 480 PEA 482
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 329/559 (58%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ + ++ Y K +DA K+ DEMPE+N+ +W A IS
Sbjct: 70 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 129
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F + R+ G+P+ TF L +C S L LG+Q+HG +V+ +D ++ V
Sbjct: 130 TGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFV 189
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K ++ A+ +F+ + +++ VS +++ Y Q +E +MF + EG+
Sbjct: 190 GSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGM 249
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +S+L+A + +A L+ G+ H ++ + + ++L+DMY KCG++ A+
Sbjct: 250 RPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQR 309
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER + WNA++ GY+ G L F M + P+ VTL+ VLS CS
Sbjct: 310 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK-RVKPDAVTLLAVLSGCSHG 368
Query: 329 GAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ G+ I+ M +YGIKP EHY C+VD+LGRAG +D A+E IK MP +PT V G
Sbjct: 369 KMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 428
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV+ ++G L +++P ++GN+V+LSN++A+ GRWE+ + VR M
Sbjct: 429 SLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKA 488
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SWI + +H F A D +H R E+ A + ++ +MK AGY+PD + LYDV+
Sbjct: 489 VTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVD 548
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + HSEK+AL FGLI G+PIR+ KNLRIC DCH+ K S + REV +R
Sbjct: 549 EEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLR 608
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH+ G CSC DYW
Sbjct: 609 DKNRFHQIVKGICSCGDYW 627
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 178/349 (51%), Gaps = 16/349 (4%)
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ F P L T+ IS GR + A+ + L G E + A LNAC D
Sbjct: 10 RSFSSSPNSVLQTFRP-ISQLCSNGRLQEALLEMVML---GPEIGFHCYDALLNACLDKR 65
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+++H ++++ + + L+ FYGKC+ + A+ V D + +KN VSW +M+
Sbjct: 66 ALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 125
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q +F R +P +F ++VL++C R +GL LG+ +H + VK +
Sbjct: 126 RYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDS 185
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+IFVGS+L+DMY K G I++A F +PER++V AII GYA G + AL F+ +
Sbjct: 186 HIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQ 245
Query: 306 S--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
S MR PNYVT +L+A S ++ G K + L+ + A ++D+ +
Sbjct: 246 SEGMR----PNYVTYASLLTALSGLALLDHG-KQAHCHVLRRELPFYAVLQNSLIDMYSK 300
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
G + A + MP R IS W A+L Y K LGR + LF+L
Sbjct: 301 CGNLSYAQRLFDNMPERTAIS-WNAMLVG---YSKHGLGREVLE-LFRL 344
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 158/331 (47%), Gaps = 4/331 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN+FTF + + GKQ+H L +K +FVG S DMY+K G
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++F+ +PER++ + A I+ G + A++ F L+ G P+ +T+ + L A
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S +LL G+Q H ++R + N L+D Y KC + A+ +FD + ++ +SW
Sbjct: 263 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVH--AV 237
+MLV Y ++ ++F R E V+P + +VLS C+ + G S++ V
Sbjct: 323 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMV 382
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV-CWNAIIGGYAHQGHADM 296
A + ++ + +VDM G+ G I +A +MP + +++G D+
Sbjct: 383 AGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 442
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + E NYV L + ++ R
Sbjct: 443 GEYVGHRLIEIEPENAGNYVILSNLYASAGR 473
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 343/576 (59%), Gaps = 4/576 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDE 70
T +F A + + + GK LH+ ++K+ + +V + DMYSK G + A ++F+
Sbjct: 354 TMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFER 413
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M E+ + +W + I+ V G AI F ++ G PD+ + LNAC+ L+ G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+ +H ++ + + N V N L D Y KC + A VF + K+ +SW +M+ Y +N
Sbjct: 474 KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+F +RE +P ++ +L ACA +A L+ GR +H A++ + +V
Sbjct: 534 SLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT 592
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+A+VDMY KCG + A F+ +P ++LV W +I GY G+ A+++F +M E
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ V+ + +L ACS +G +++G KIF M + I+P EHYAC+VDLL R G + +A
Sbjct: 653 --PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKA 710
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
++ IK MP++P ++WGALL CR++ +L A+ +F+L+P ++G +VLL+N++A
Sbjct: 711 HKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEA 770
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
+WEE +RK++ G+KK GCSWI +K +I+IF A D S + +I+ +L +LR +M
Sbjct: 771 EKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKM 830
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
K GY P T +AL + +E EK + HSEK+A+AFG++ +PPG IR+TKNLR+CGDCH
Sbjct: 831 KEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCH 890
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S RE+I+RD++RFH F DG CSC YW
Sbjct: 891 EMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 202/393 (51%), Gaps = 6/393 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN +TF + K +A+ G+Q+H L K G V S Y A
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDE+ +R++ +WN+ IS V G I+ FI + G + DL T AC++
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366
Query: 126 LLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L LG+ LH + +++ D V N L+D Y KC ++ A VF+ + +K VSW SM+
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV+ + ++F + GV P + ++S+L+ACA L+ G+ VH + +E
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
N FV +AL DMY KCGS++DA F+ M +++++ WN +IGGY + AL+ F EM
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E+ P+ T+ C+L AC+ A++KG +I + L+ G VVD+ +
Sbjct: 547 QR---ESKPDGTTVACILPACASLAALDKGREI-HGYALRNGYSEDKYVTNAVVDMYVKC 602
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
GL+ A + +P + +S W ++ ++G
Sbjct: 603 GLLVLARSLFDMIPNKDLVS-WTVMIAGYGMHG 634
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 189/363 (52%), Gaps = 5/363 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++ ++ SG + D +G MY K G + +FD++ E + WN IS
Sbjct: 169 GRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSG 228
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +I+ F + G +P+ TF + L + + ++ GRQ+HG + + GF+ +V
Sbjct: 229 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 288
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ FY +V A+ +FD + D++ +SW SM+ YV+N ++ G ++F+ GV
Sbjct: 289 VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV 348
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAE 267
+ + +V ACA I L LG+ +H+ ++KA ++ + + L+DMY KCG + A
Sbjct: 349 DIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAI 408
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M E+ +V W ++I GY +G +D A+ F+EM S VP+ + +L+AC+
Sbjct: 409 RVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR--GVVPDVYAVTSILNACAI 466
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G ++ G KI + + ++ + + D+ + G + A+++ M + IS W
Sbjct: 467 NGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS-WN 524
Query: 388 ALL 390
++
Sbjct: 525 TMI 527
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 3/335 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ + + A + +GK +H ++ + FV + DMY+K G
Sbjct: 445 MKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGS 504
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F M ++++ +WN I P A+ F ++R +PD T L A
Sbjct: 505 MKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRE-SKPDGTTVACILPA 563
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L GR++HG+ +R+G+ + V N +VD Y KC + LA+ +FD I +K+ VSW
Sbjct: 564 CASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSW 623
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y + F R G+EP + S+L AC+ L+ G + + K
Sbjct: 624 TVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKK 683
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
C +E N+ + +VD+ + G++ A MP + + W A++ G +A
Sbjct: 684 ECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAE 743
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E + + E YV L + + + V+K
Sbjct: 744 KVAERIFELEPENTGYYVLLANIYAEAEKWEEVQK 778
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 47/394 (11%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG--FDGNVS 147
G KNA++ + + + DL +C+ L C++ ++ GR++ + SG DG +
Sbjct: 131 GDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILG 188
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V LV Y KC ++ ++VFD + + W M+ Y + +F G
Sbjct: 189 V--KLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELG 246
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++P + SS+L A +A +E GR VH + K V ++L+ Y ++ A+
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+++ +R+++ WN++I GY G D + F +M + + T+V V AC+
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDI--DLATMVNVFVACAN 364
Query: 328 AGAVEKGMKIFYSMTLKYGI--------------------------------KPGAEHYA 355
G + G K+ +S ++K + +
Sbjct: 365 IGTLLLG-KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWT 423
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMR---PTISVWGALLNACRVYGKPELGRIAADNLFK- 411
++ R GL D A ++ EM R P + ++LNAC + G + G+I D + +
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN 483
Query: 412 -LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
L+ N ++ L++M+A G ++A V MK
Sbjct: 484 NLETNSFVSNA-LTDMYAKCGSMKDAHDVFSHMK 516
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 337/587 (57%), Gaps = 8/587 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R +S + T+ L K + +H +G F+ + +MY K GL
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +FDEMP+RN+ +W IS A+D I + R G P++ T+ + L A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C LL L RQLHG +++ G + +V V + L+D Y K E A VF+ +I + V W
Sbjct: 127 CD--GLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ + QN + + ++ +R ++SVL AC +A LELGR VH +K
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALS 299
+ ++ + +AL+DMY KCGS++DA + F +M E++++ W+ +I G A G + AL
Sbjct: 244 --YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE M S + PNY+T++ VL ACS AG V G F SM +GI PG EHY C++D
Sbjct: 302 LFEAMKSKGPK--PNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIID 359
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A ++I EM P W LL ACRV+ +L AA + KLDP D+G
Sbjct: 360 LLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGT 419
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN++A + +WE+ VR++M+ G+KK GCSWI V ++H F D SH R EI
Sbjct: 420 YILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEI 479
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L++L + + GY+PDTNF L D+E E+ + +HSEK+A+ FGL+++P I I
Sbjct: 480 KRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHI 539
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH K +S + R +++RD R+H F G CSC DYW
Sbjct: 540 RKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 329/561 (58%), Gaps = 8/561 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H L + G D F+ +M+S+ D+A K+FD+ +R + WNA L GR
Sbjct: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDC--SLLQLGRQLHGFLVRSGFDGNVS 147
+ ++ + + G D T+ L AC S+C S LQ G+++H ++R G+ +V
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARR 205
V L+D Y + V A VFD + KN VSW +M+ Y +N + ++F +
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
P + SVL ACA A LE G+ +HA ++ ++ + V SAL+ MY +CG ++
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
++ F++M ++++V WN++I Y G+ A+ FEEM P++++ + VL AC
Sbjct: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFS--PSHISFISVLGAC 388
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S G VE+G K+F SM ++GI+P EHYAC+VDLLGRA +D A +II+++ + P V
Sbjct: 389 SHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKV 448
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WG+LL ACR++ EL A+ LFKL+P ++GN+VLL++++A W+E V+K +
Sbjct: 449 WGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDS 508
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
++K G SWI V+ +I+ F + D + + ++ A+L L EMK GY P T LYD
Sbjct: 509 RELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYD 568
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+++EEK V HSEK+A+AFGLI G IRITKNLR+C DCHS KFIS RE++
Sbjct: 569 LDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIM 628
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F DG CSC DYW
Sbjct: 629 VRDLNRFHHFKDGVCSCGDYW 649
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 8/347 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVT----GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+S + FT+ L KA A V+ GK++HA L+ G V V + DMY++ G
Sbjct: 166 VSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCV 225
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF--INLRRTGGEPDLITFCAFLN 119
A +FDEMP +N+ +W+A I+ G+P A++ F + L P+ +T + L
Sbjct: 226 SYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQ 285
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ + L+ G+ +H +++R G D + V + L+ Y +C ++ +++FD + K+ V
Sbjct: 286 ACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVL 345
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ Y + ++F G P SVL AC+ +E G+ + V
Sbjct: 346 WNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMV 405
Query: 240 KAC-VEGNIFVGSALVDMYGKCGSIQD-AEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
K ++ ++ + +VD+ G+ + + A+I + E W +++G H ++A
Sbjct: 406 KEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELA 465
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ + + + NYV L + + V++ K+ S L+
Sbjct: 466 ERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQ 512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+LSA AR L VH + V + + F+ + L++M+ + ++ +A F+K +R
Sbjct: 76 ILSA-ARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA---VPNYVTLVCVLSACSRAGAVEKG 334
+ WNA+ A G + L + M M + Y+ CV S C ++KG
Sbjct: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASEC-LVSFLQKG 193
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+I ++ L++G ++D+ R G V A + EMP++ +S W A++
Sbjct: 194 KEI-HAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVS-WSAMIACYA 251
Query: 395 VYGKP 399
GKP
Sbjct: 252 KNGKP 256
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/582 (38%), Positives = 343/582 (58%), Gaps = 8/582 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + + T + + + G +H LK G DVFV + +MYSK G
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD+M R+L +WN+ I+ P A+ F ++ G PDL+T + +
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
S S ++ R + GF++R + D +V + N LV+ Y K + A VFD + K+ +S
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS 392
Query: 180 WCSMLVVYVQN---YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
W +++ Y QN E + M R P S++ A + + L+ G +HA
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECR--DTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + ++FV + L+D+YGKCG ++DA F ++P V WNAII G +
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F++M + R +A +++T V +LSACS +G V++G K F M +YGIKP +HY C
Sbjct: 511 ALQLFKDMLAERVKA--DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG +++AYE+++ MP++P S+WGALL+AC++YG ELG +A+D L ++D +
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G +VLLSN++A T +WE VR +D G++K G S + V ++ +F + +H +
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY 688
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
TEI L L +MK+ GY+PD +F D+EE+EK + HSE++A+AFG+I+ PP P
Sbjct: 689 TEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSP 748
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
IRI KNLR+CGDCH+A K+IS I RE++VRD+NRFH F DG
Sbjct: 749 IRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 238/462 (51%), Gaps = 26/462 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFP + KA +L V GK++H K G DVFV S +YS+ G+ D A
Sbjct: 120 LRPDFYTFPPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F +MP +++ +WNA IS G A+ ++ G + D IT + L C+
Sbjct: 177 KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G +H +++ G D +V V N L++ Y K + A++VFD + ++ VSW S++
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVE 244
Y QN + + F + G+ P + S+ S ++++ + RS+ + + ++
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLD 356
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ +G+ALV+MY K G + A F+++P ++ + WN ++ GY G A A+ ++ M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
R + +PN T V ++ A S GA+++GMKI ++ +K + C++DL G+
Sbjct: 417 EECR-DTIPNQGTWVSIIPAYSHVGALQQGMKI-HAKLIKNSLYLDVFVATCLIDLYGKC 474
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVL 422
G ++ A + E+P R T W A++ + ++G+ E A LFK L +H+
Sbjct: 475 GRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGE----EALQLFKDMLAERVKADHIT 529
Query: 423 LSNMFAA---TGRWEEA----DLVRKEMKDVGIK---KGAGC 454
++ +A +G +E D+++KE GIK K GC
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEY---GIKPSLKHYGC 568
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 17/388 (4%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
D F LF +S +++ T K+LHAL L G+ ++ + ++Y G + FD
Sbjct: 22 DADFNALF--NSCVNVNAT-KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG----EPDLITFCAFLNACSDCS 125
+ ++N+ +WN+ IS V G+ A++ L G PD TF L AC S
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VS 136
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ G+++H + + GF+ +V V LV Y + + +A VF + K+ SW +M+
Sbjct: 137 LVD-GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ QN + + EGV+ ++S+L CA+ + G +H +K ++
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDS 255
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV +AL++MY K G +QDA++ F++M R+LV WN+II Y AL F+ M
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 306 --SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+R P+ +T+V + S S+ I + + + +V++ +
Sbjct: 316 LGGIR----PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLN 391
G ++ A+ + ++P + TIS W L+
Sbjct: 372 LGYMNCAHTVFDQLPRKDTIS-WNTLVT 398
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F A N+C + + ++LH L+ G N+ + L++ Y ++ L++ FD I
Sbjct: 25 FNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 174 DKNDVSWCSMLVVYVQ--NYEEENGC--QMFLTARREGVEPKDFMISSVLSACARIAGLE 229
KN SW S++ YV+ Y E C Q+F + P + +L AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G+ VH K E ++FV ++LV +Y + G + A F MP +++ WNA+I G+
Sbjct: 140 -GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 290 HQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
G+A AL + M+ E V + +T+ +L C+++ V G+ I + LK+G+
Sbjct: 199 QNGNAAGALGV---LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLI-HLHVLKHGLD 254
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL----------NACRVYGK 398
++++ + G + A + +M +R +S W +++ A R +
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS-WNSIIAAYEQNNDPSTALRFFKG 313
Query: 399 PELGRIAADNL 409
+LG I D L
Sbjct: 314 MQLGGIRPDLL 324
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 335/586 (57%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR N F + +A+ L V GK +HA ++K+ + V + DMY+K G
Sbjct: 623 MRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGN 682
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA F+ + ++ W+ IS + + A + FI + R+ P+ + + L A
Sbjct: 683 IEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQA 742
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ LL LG+Q+H ++ G + + V N L+D Y KC+++ + +F + D N+VSW
Sbjct: 743 CANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSW 802
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V Y ++ E +F R V SSVL ACA A + VH + K
Sbjct: 803 NTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEK 862
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + V ++L+D Y KCG I+DA F + E +LV WNAII GYA G A MA
Sbjct: 863 STFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQEL 922
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M+ +A N +T V +LS C G V +G+ +F SM L +GI+P EHY C+V L
Sbjct: 923 FDMMSKNSIKA--NDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRL 980
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A I ++P P+ VW ALL++C V+ ELGR +A+ + +++P D +
Sbjct: 981 LGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTY 1040
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM++A G ++ RK M+++G++K G SW+ +K +H F H I
Sbjct: 1041 VLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVIN 1100
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GY+PDT+ L+D+EEE+K+ + HSE++ALA+GL+ PPG PIRI
Sbjct: 1101 AMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIM 1160
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+ FK IS IV +E+IVRD NRFH F +G CSC DYW
Sbjct: 1161 KNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 8/427 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E N F + K A+ +HA A K G + FVG + D YS G+
Sbjct: 522 LRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGV 581
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD + ++ W A +S P+N + F +R + + + L A
Sbjct: 582 VSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRA 641
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + LG+ +H V++ +D V L+D Y KC + A++ F+ + + + + W
Sbjct: 642 AVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILW 701
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y Q + E ++F+ R V P +F +SSVL ACA + L+LG+ +H A+K
Sbjct: 702 SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIK 761
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +FVG+AL+D+Y KC ++ + F+ + + N V WN II GY+ G + ALS
Sbjct: 762 IGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSV 821
Query: 301 FEEMTSMRCEAVPN-YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F E MR +VP+ VT VL AC+ ++ ++ + + K ++D
Sbjct: 822 FRE---MRAASVPSTQVTYSSVLRACASTASINHVGQV-HCLIEKSTFNSDTIVSNSLID 877
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDS 417
+ G + A EI + + +S W A+++ V+G+ + + D + K + ND
Sbjct: 878 SYAKCGCIRDAREIFETLKECDLVS-WNAIISGYAVHGQAAMAQELFDMMSKNSIKANDI 936
Query: 418 GNHVLLS 424
LLS
Sbjct: 937 TFVALLS 943
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 13/355 (3%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +H ++SG + D+F +MY+K G A ++FD +PERN+ ++ +
Sbjct: 447 GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
L G + A F LR G E + L L L +H + G D N
Sbjct: 507 ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y C V A+ VFDGI+ K+ V+W +M+ Y +N EN Q+F R
Sbjct: 567 FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ F ++SVL A ++ + LG+ +HA +VK + V AL+DMY KCG+I+DA
Sbjct: 627 VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDA 686
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+AF + +++ W+ +I YA + A F M MR PN +L VL AC+
Sbjct: 687 RLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM--MRSSVSPNEFSLSSVLQACA 744
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEM 377
++ G +I + IK G E V +DL + ++ + EI +
Sbjct: 745 NMPLLDLGKQIH-----NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL 794
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 171/382 (44%), Gaps = 12/382 (3%)
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV--CNGLVDFYGKCNEVGLAKV 167
D + L C + GR +HG +VRSG + + N L++ Y K G A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VFDG+ ++N VS+ +++ + E E +F R EG E F++++VL +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L L VHA A K + N FVGSAL+D Y CG + DA F+ + ++ V W A++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y+ + L F +M + P +T V + C + + KG+ ++ ++K
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGI---HACSVKTLY 663
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
Y ++D+ + G ++ A + EM + +W +++ Y + A +
Sbjct: 664 DTERHVYGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMISR---YAQCNQNEQAFE 719
Query: 408 NLFKLDPND-SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
++ + S N LS++ A DL K++ + IK G S + V N +
Sbjct: 720 LFIRMMRSSVSPNEFSLSSVLQACANMPLLDL-GKQIHNHAIKIGHE-SELFVGNALIDL 777
Query: 467 QAKDTSHERNTEIQAMLTKLRE 488
AK + E + EI + L + E
Sbjct: 778 YAKCSDMESSLEIFSSLRDVNE 799
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 329/589 (55%), Gaps = 33/589 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA------------------------ 64
GKQLH+L + SG D F+ ++YSK G D A
Sbjct: 71 GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFR 130
Query: 65 -------DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
KMFDEMPERN+ATWNA ++ + + + F + G PD +
Sbjct: 131 SGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSV 190
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L GRQ+HG++ + GF+ N+ V + L Y KC +G + + + +N
Sbjct: 191 LRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNV 250
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +++ QN E + + G P SV+S+C+ +A L G+ +HA
Sbjct: 251 VAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAE 310
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+KA + V S+L+ MY +CG ++ + F + ++VCW+++I Y G A
Sbjct: 311 VIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEA 370
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F +M + EA N VT + +L ACS G EKG+K F M KYG+KP EHY C+
Sbjct: 371 IDLFNQMEQEKLEA--NDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCM 428
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGR G V+ A +I+ MP++ + W LL+AC+++ K E+ R ++ +F+LDP D
Sbjct: 429 VDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDP 488
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VLLSN+ A+ RW++ VRK M+D +KK G SW+ VKN+IH F D SH ++
Sbjct: 489 VPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSV 548
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI + L +L EMK GY+PD + L+D++ E+K + HHSEK+A+AF L+ P G PI
Sbjct: 549 EIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPI 608
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH A K+IS I RE+IVRD++RFH F +G CSC DYW
Sbjct: 609 RVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++F + + + L V G+Q+H K G ++ V S MY K G + +++
Sbjct: 182 PDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERL 241
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
MP +N+ WN I+ G P+ +D + ++ G PD ITF + +++CS+ + L
Sbjct: 242 IRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATL 301
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+Q+H ++++G VSV + L+ Y +C + + VF + + V W SM+ Y
Sbjct: 302 GQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAY 361
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVEGN 246
+ +F +E +E D S+L AC+ E G + V K V+
Sbjct: 362 GFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPR 421
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +VD+ G+ GS+++AE MP + +++ W ++ +MA EE+
Sbjct: 422 LEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVF 481
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ YV L + ++ R V K LK +PG
Sbjct: 482 RLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKK--EPG 524
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ TF + + S L G+Q+HA +K+G V V S MYS+ G
Sbjct: 276 MKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGC 335
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + K+F E ++ W++ I+ GR AID F + + E + +TF + L A
Sbjct: 336 LEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV- 178
CS C L + G + +V + G + +VD G+ V A+ + + K DV
Sbjct: 396 CSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVI 455
Query: 179 SWCSML 184
+W ++L
Sbjct: 456 TWKTLL 461
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP F S +L +C L LG+ +H++ + + + F+ + L+++Y KCG + A
Sbjct: 51 EPSLF--SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAIT 108
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F MP +N++ N +I GY G A F+EM N T +++ +
Sbjct: 109 LFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPER------NVATWNAMVAGLIQF 162
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E+G+ +F M + G P + +A L G AGL
Sbjct: 163 EFNEEGLGLFSRMN-ELGFLP--DEFALGSVLRGCAGL 197
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 330/586 (56%), Gaps = 37/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + N FTFP + A +++ G+Q+H + SG +V+V + DMY+K G
Sbjct: 227 MRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGD 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + D M ++ WN+ I V G + A+ F + D T+ + L +
Sbjct: 287 LASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKS 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ C L++G +H +++GFD +V N LVD Y K + A VF+ I+DK+ +SW
Sbjct: 347 LASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YV N E Q+F R V+ F+++ V SACA + +E GR VHA +K
Sbjct: 407 TSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIK 466
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++L+ MY KCG ++DA + M RN++ W AII GYA G
Sbjct: 467 SSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG-------- 518
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
VE G F SM YGIKP ++ YAC++DL
Sbjct: 519 -----------------------------LVETGQSYFESMEKVYGIKPASDRYACMIDL 549
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A ++ M + P ++W +LL+ACRV+G ELG A NL KL+P++S +
Sbjct: 550 LGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPY 609
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNMF+ GRWE+A +R+ MK +GI + G SWI +K+++H F ++D SH EI
Sbjct: 610 VLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIY 669
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ + ++ +K AG++PD NFAL D++EE K + +HSEK+A+AFGL+ + G PIRI
Sbjct: 670 SKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIF 729
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA K+IS I R +I+RD N FH F +G CSC D+W
Sbjct: 730 KNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 214/440 (48%), Gaps = 9/440 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T + +A S L + TGK +H A+K ++FV DMYSK +A+ +
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 68 FDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +P+R N W A ++ G AI F +R G E + TF + L AC+ S
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISA 251
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
GRQ+HG ++ SGF NV V + LVD Y KC ++ A+++ D + + V W SM+V
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
V + E +F + DF SVL + A L++G SVH++ +K +
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDAC 371
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V +ALVDMY K G++ A FNK+ +++++ W +++ GY H G + AL F +M +
Sbjct: 372 KTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRT 431
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R + + + CV SAC+ +E G ++ ++ +K ++ + + G
Sbjct: 432 ARVDL--DQFVVACVFSACAELTVIEFGRQV-HANFIKSSAGSLLSAENSLITMYAKCGC 488
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI---AADNLFKLDPNDSGNHVLL 423
++ A + M R IS W A++ G E G+ + + ++ + P S + +
Sbjct: 489 LEDAIRVXDSMETRNVIS-WTAIIVGYAQNGLVETGQSYFESMEKVYGIKP-ASDRYACM 546
Query: 424 SNMFAATGRWEEADLVRKEM 443
++ G+ EA+ + M
Sbjct: 547 IDLLGRAGKINEAEHLLNRM 566
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 171/343 (49%), Gaps = 15/343 (4%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ G +A K+F+E P N TW++ +S G + F + G +P T
Sbjct: 78 YANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTL 137
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L ACS SLL G+ +H + ++ + N+ V GLVD Y KC + A+ +F + D
Sbjct: 138 GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD 197
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
KN V W +ML Y QN E Q F R +G+E F S+L+AC I+ GR
Sbjct: 198 RKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQ 257
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + N++V SALVDMY KCG + A + + M ++VCWN++I G G+
Sbjct: 258 VHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGY 317
Query: 294 ADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIK 348
+ AL F +M + +R + Y +++ L++C K +KI +S+T+K G
Sbjct: 318 MEEALVLFHKMHNRDIRIDDF-TYPSVLKSLASC-------KNLKIGESVHSLTIKTGFD 369
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+VD+ + G + A ++ ++ + IS W +L+
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVIS-WTSLVT 411
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 5/252 (1%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ Y + A+ +F+ N ++W S++ Y +N E G + F +G +
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + + SVL AC+ ++ L G+ +H A+K +E NIFV + LVDMY KC + +AE
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 270 FNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F +P+R N V W A++ GYA G + A+ F+EM + E+ N+ T +L+AC+
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMES--NHFTFPSILTACTSI 249
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A G ++ + + G P + +VD+ + G + A I+ M + + W +
Sbjct: 250 SAYAFGRQV-HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVV-CWNS 307
Query: 389 LLNACRVYGKPE 400
++ C +G E
Sbjct: 308 MIVGCVTHGYME 319
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ + ++ Y G++ +A FN+ P N + W++++ GY G L F +M S
Sbjct: 69 YTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+ TL VL ACS + G K+ + +K ++ +VD+ + +
Sbjct: 129 GQK--PSQYTLGSVLRACSTLSLLHTG-KMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185
Query: 368 DRAYEIIKEMPMRPTISVWGALLN 391
A + +P R W A+L
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLT 209
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ K G + +A F++MP R+ WN +I YA+ G+ A F E +
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNE------TPI 96
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP-----GAEHYACVVDLLGRAGLV 367
N +T ++S + G +G++ F M G KP G+ AC L G +
Sbjct: 97 XNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKPSQYTLGSVLRACSTLSLLHTGKM 155
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM- 426
Y I ++ + I V L++ +Y K + + A+ LF P D N+V + M
Sbjct: 156 IHCYAI--KIQLEANIFVATGLVD---MYSKCKC-LLEAEYLFFSLP-DRKNYVQWTAML 208
Query: 427 --FAATGRWEEADLVRKEMKDVGIK 449
+A G +A KEM++ G++
Sbjct: 209 TGYAQNGESLKAIQCFKEMRNQGME 233
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 349/613 (56%), Gaps = 54/613 (8%)
Query: 25 IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+P T K++H A+++G DVFVG + D Y+K GL ++A K+F+ M +++ +WNA ++
Sbjct: 243 VPQT-KEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 301
Query: 85 NAVLGGRPKNAIDAFINLRR-----------------------------------TGGEP 109
G K A + F N+R+ +G P
Sbjct: 302 GYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLP 361
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRS----------GFDGNVSVCNGLVDFYGKC 159
+ +T + L+AC+ G ++H + +++ G D ++ V N L+D Y KC
Sbjct: 362 NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 421
Query: 160 NEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GVEPKDFMI 215
A+ +FD I ++N V+W M+ + Q + + ++F+ E GV P + I
Sbjct: 422 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 481
Query: 216 SSVLSACARIAGLELGRSVHAVAVK--ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S +L ACA +A + +G+ +HA ++ FV + L++MY KCG + A F+ M
Sbjct: 482 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 541
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+++ + W +++ GY G AL F++M + VP+ +T + VL ACS G V++
Sbjct: 542 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDITFLVVLYACSHCGMVDQ 599
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G+ F SM+ YG+ P AEHYA +DLL R G +D+A++ +K+MPM PT VW ALL+AC
Sbjct: 600 GLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSAC 659
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ EL A + L +++ + G++ L+SN++A GRW++ +R MK GIKK G
Sbjct: 660 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 719
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CSW+ + F D SH + +I A+L L + +KA GY+P+TNFAL+DV+EEEK
Sbjct: 720 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 779
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV E++VRD +RFH
Sbjct: 780 LLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 839
Query: 574 RFWDGYCSCSDYW 586
F +G CSC YW
Sbjct: 840 HFKNGSCSCGGYW 852
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 210/456 (46%), Gaps = 60/456 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + FT P + KA L G H L +G +VF+ + MYS+ G
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
++A +FDE+ +R ++ +WN+ +S V A+D F ++ + T D+
Sbjct: 168 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 227
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC + +++HG +R+G +V V N L+D Y KC + A VF+
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 287
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---------------------- 209
+ K+ VSW +M+ Y Q+ + ++F R+E +
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347
Query: 210 -------------PKDFMISSVLSACARIAGLELGRSVHAVAVKACV----------EGN 246
P I SVLSACA + G +HA ++K C+ + +
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 407
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +AL+DMY KC S + A F+ +P ERN+V W +IGG+A G ++ AL F EM
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 467
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLG 362
S PN T+ C+L AC+ A+ G +I ++ L++ + ++ C++++
Sbjct: 468 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQI-HAYVLRHHQYDSSAYFVANCLINMYS 526
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G VD A + M + IS W +++ ++G+
Sbjct: 527 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR 561
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 58/406 (14%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G Y G D A + + + WN I + GR +AI+ + R G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
D T L AC + + G HG + +GF+ NV +CN LV Y +C + A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 167 VVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMF-----LTARREGVEPKDFM-ISS 217
++FD I + + +SW S++ +V++ +F + + E D + I +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + + + VH A++ ++FVG+AL+D Y KCG +++A FN M ++
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE--------------------------- 310
+V WNA++ GY+ G+ A FE +MR E
Sbjct: 293 VVSWNAMVAGYSQSGNFKAA---FELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349
Query: 311 ---------AVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMT---LKYGIKPGAEH---- 353
++PN VT++ VLSAC+ GA +GM+I YS+ L G E
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409
Query: 354 -YACVVDLLGRAGLVDRAYEIIKEMPMRP-TISVWGALLNACRVYG 397
Y ++D+ + A I ++P+ + W ++ YG
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYG 455
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 18/338 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKS----------GQIHDVFVGCSAFDMYSK 57
PN T + A ++L G ++HA +LK+ G+ D+ V + DMYSK
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420
Query: 58 TGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINL--RRTGGEPDLIT 113
A +FD++P ERN+ TW I G +A+ F+ + G P+ T
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVR-SGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDG 171
L AC+ + +++G+Q+H +++R +D + V N L++ Y KC +V A+ VFD
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ K+ +SW SM+ Y + +F R+ G P D VL AC+ ++ G
Sbjct: 541 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600
Query: 232 RS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYA 289
S +++ + + +D+ + G + A MP E V W A++
Sbjct: 601 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 660
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ ++A + ++ M E +Y + + + R
Sbjct: 661 VHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 698
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA L+ Q FV +MYSK G D
Sbjct: 474 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 533
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD M +++ +W + ++ + GR A+D F +R+ G PD ITF L ACS
Sbjct: 534 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 593
Query: 124 CSLLQLG 130
C ++ G
Sbjct: 594 CGMVDQG 600
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 322/526 (61%), Gaps = 5/526 (0%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGE--PDLITFCAFLNA 120
A +FD MP R+ +W+A +S V G+P+ A+ + LR GG + T + L A
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + GR+LH +VR G D + V + L D Y K + A+ VFD + ++ VSW
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSW 231
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y + G ++F+ R G+ P +F + VL ACA +LG+ VH K
Sbjct: 232 TAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAK 291
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + F GSALV MY K G + A F MP+ +LV W A+I GYA G D AL
Sbjct: 292 SRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHC 351
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + S P++VT V VLSAC+ AG V+KG+ IF+S+ KYGI+ A+HYACV+DL
Sbjct: 352 FDMLLSSGFR--PDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDL 409
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L R+GL +RA ++I MP++P +W +LL CR++ L AA+ LF+++P + +
Sbjct: 410 LSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATY 469
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V L+N++A+ G ++E + +R+ M+ GI K SWI V R+H+F D SH + EI
Sbjct: 470 VTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIY 529
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL +M+ GY+ DT F L+DVE+E+K ++G+HSE++A+AFG+IA P G PI++
Sbjct: 530 ALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVF 589
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+ K IS IV RE+IVRD+NRFH F +G CSC DYW
Sbjct: 590 KNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G++LH ++ G D V + DMY+K G DDA +FD MP R++ +W A +
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR F+ + R+G P+ T+ L AC++ + +LG+Q+HG + +S +
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV Y K ++G A VF G+ + VSW +M+ Y QN + + F G
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360
Query: 209 EPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P VLSACA ++ G + H++ K +E + ++D+ + G + AE
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAE 420
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
N MP + N W +++GG + +A + E + + E YVTL + ++
Sbjct: 421 DMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVG 480
Query: 327 RAGAVE 332
VE
Sbjct: 481 LFDEVE 486
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I PN+FT+ + +A + GKQ+H KS F G + MYSK G
Sbjct: 254 MMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGD 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F MP+ +L +W A IS G+P A+ F L +G PD +TF L+A
Sbjct: 314 MGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA 373
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C+ L+ G + H + G + ++D + A+ + + + + N
Sbjct: 374 CAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKF 433
Query: 179 SWCSML 184
W S+L
Sbjct: 434 LWASLL 439
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F++MP R+ W+AI+ + G AL+ + M + +
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
A + A + + + ++ GI A ++ + D+ + G +D A + MP+R
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228
Query: 383 ISVWGALLN 391
+S W A+L+
Sbjct: 229 VS-WTAMLD 236
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 325/559 (58%), Gaps = 4/559 (0%)
Query: 30 KQLHALALKSG-QIHDVFVG-CSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
+Q+HA +++ G + + +G F + S A ++F ++ N+ TWN I
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P A++ + + + EPD T+ L A + ++ G ++H +R+GF+ V
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N LV Y C A +F+ + ++N V+W S++ Y N +F G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
VEP F + S+LSACA + L LGR H VK ++GN+ G+AL+D+Y KCGSI+ A
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M E+++V W ++I G A G AL F+E+ R +P+ +T V VL ACS
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE--RKGLMPSEITFVGVLYACSH 354
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++G F M +YGI P EHY C+VDLLGRAGLV +A+E I+ MPM+P VW
Sbjct: 355 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 414
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC ++G LG +A L +L+P SG++VLLSN++A+ RW + VR+ M G
Sbjct: 415 TLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREG 474
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK G S + ++NR+H F D SH + EI L ++ + +K GY+P + L D+E
Sbjct: 475 VKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIE 534
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EEEK T + +HSEKIA+AF LI G+PIR+ KNLR+C DCH A K IS + RE++VR
Sbjct: 535 EEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVR 594
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D +RFH F DG+CSC DYW
Sbjct: 595 DRSRFHHFKDGHCSCKDYW 613
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 180/369 (48%), Gaps = 16/369 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M CI P+ T+P L KA + L G+++H++A+++G VFV + MY+ G
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGH 190
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A K+F+ M ERNL TWN+ I+ L GRP A+ F + G EPD T + L+A
Sbjct: 191 AESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSA 250
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L LGR+ H ++V+ G DGN+ N L+D Y KC + A VFD + +K+ VSW
Sbjct: 251 CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-----RSVH 235
S++V N + ++F R+G+ P + VL AC+ ++ G R
Sbjct: 311 TSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKE 370
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
+ +E +VD+ G+ G ++ A MP + N V W ++G GH
Sbjct: 371 EYGIVPKIEHY----GCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHL 426
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ + ++ + + +YV L + ++ R V K + L+ G+K H
Sbjct: 427 ALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTM----LREGVKKTPGH- 481
Query: 355 ACVVDLLGR 363
+V+L R
Sbjct: 482 -SLVELRNR 489
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/560 (40%), Positives = 327/560 (58%), Gaps = 8/560 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP-ERNLATWNAYISNAV 87
+QLH+ LK G V + D YSK G +A +F M +N+ +W A I+ +
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCI 384
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A F +R G P+ T+ L A S+ L Q+H ++++ ++
Sbjct: 385 QNGDVPLAAALFSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSI 440
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+ Y K A +F I K+ VSW +ML Y Q + + +F+ G
Sbjct: 441 VGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHG 500
Query: 208 VEPKDFMISSVLSACAR-IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++P +F ISSV+ ACA AG++LGR HA+++K + V SALV MY + GSI+ A
Sbjct: 501 LKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F + +R+LV WN+++ GYA G++ AL F +M + E + VT + V+ C+
Sbjct: 561 QCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEM--DGVTFLSVIMGCA 618
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VE+G + F SM YGI P EHYAC+VDL RAG +D A +I+ M VW
Sbjct: 619 HAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVW 678
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL AC+V+ ELG++AA+ L L+P DS +VLLSN+++A G+W+E D VRK M
Sbjct: 679 RTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+KK AGCSWI +KN++H F A D SH + +I A L + ++K GY PDT+FAL++V
Sbjct: 739 KVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEV 798
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EE+K + HSE++ALAFGLIA PPG P+ I KNLR+CGDCH+ K +S I RE+++
Sbjct: 799 AEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVM 858
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD +RFH F G CSC D+W
Sbjct: 859 RDCSRFHHFNSGVCSCGDFW 878
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 198/401 (49%), Gaps = 8/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + PN TF + ++ + G+++HA ++K G VFV S +MY+K GL
Sbjct: 196 MRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGL 255
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F M R++ +WN ++ VL G A+ F + R + T+ +
Sbjct: 256 VEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKL 315
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVS 179
C++ L L RQLH +++ GF +V L+D Y K ++G A +F + +N VS
Sbjct: 316 CANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVS 375
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +QN + +F R +GV P DF S++L+A L +HA +
Sbjct: 376 WTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVI 431
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E VG+AL+ Y K + ++A F + ++++V W+A++ YA G +D A +
Sbjct: 432 KTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATN 491
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +MT + PN T+ V+ AC+ A + F+++++K+ + +V
Sbjct: 492 IFIKMTMHGLK--PNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVS 549
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ R G ++ A I + R +S W ++L+ +G +
Sbjct: 550 MYARKGSIESAQCIFERQTDRDLVS-WNSMLSGYAQHGYSQ 589
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 194/422 (45%), Gaps = 20/422 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDEMPERNLATWNAYISNA 86
GK ALA + + CS + ++T L D A + FDE+P RN T + + +
Sbjct: 21 GKNAGALAPELAPKSQSTLACSV-PLENQTNLNDATGARQAFDEIPHRN--TLDHALFDH 77
Query: 87 VLGGRPKNAIDAFINLRRT-GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-G 144
G A+D F+++ R GG L C LG+QLHG +R G D G
Sbjct: 78 ARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRG 137
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V V LVD Y K + V + VF+ + +N V+W S+L Y+Q+ + ++F R
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EGV P +SVLS A ++LGR VHA +VK +FV ++L++MY KCG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE-MTSMRCEAVPNYVTLVCVLS 323
+A + F M R++V WN ++ G GH AL F + +S+ Y T++ + +
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+ G + +S LK G ++D +AG + A +I M +
Sbjct: 318 NIKQLGLARQ----LHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNV 373
Query: 384 SVWGALLNACRVYGKPELG-----RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
W A++N C G L R+ D + PND +L+ A+ A +
Sbjct: 374 VSWTAMINGCIQNGDVPLAAALFSRMREDG---VAPNDFTYSTILTASVASLPPQIHAQV 430
Query: 439 VR 440
++
Sbjct: 431 IK 432
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 6/301 (1%)
Query: 27 VTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
V GKQLH L ++ G DV VG S DMY K D K+F+ MP+RN+ TW + ++
Sbjct: 120 VLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTG 179
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ G + ++ F +R G P+ +TF + L+ + ++ LGR++H V+ G
Sbjct: 180 YIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCST 239
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V VCN L++ Y KC V A+VVF G+ ++ VSW +++ V N + Q+F +R
Sbjct: 240 VFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRS 299
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
++V+ CA I L L R +H+ +K V +AL+D Y K G + +
Sbjct: 300 SITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGN 359
Query: 266 AEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLS 323
A F M +N+V W A+I G G +A + F + MR + V PN T +L+
Sbjct: 360 ALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALF---SRMREDGVAPNDFTYSTILT 416
Query: 324 A 324
A
Sbjct: 417 A 417
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAF-DMYSKT 58
M + PN+FT + A ++ V G+Q HA+++K + HD SA MY++
Sbjct: 496 MTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKH-RCHDALCVSSALVSMYARK 554
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G + A +F+ +R+L +WN+ +S G + A+D F + G E D +TF + +
Sbjct: 555 GSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVI 614
Query: 119 NACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
C+ L++ G++ + R G + +VD Y + ++ A + +G+
Sbjct: 615 MGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM 669
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/589 (39%), Positives = 328/589 (55%), Gaps = 6/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I+P + A + G+ + L +G + V + +Y K G
Sbjct: 67 MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F M R++ W+A ++ G P+ A+ F + G P+ +T + L+A
Sbjct: 127 CTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 186
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G +H + G V V LV+ YGKC + A F I++KN V+W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV--A 238
++ Y +N + ++ EG+ P SVL ACA IA L+ GR +H
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ +E +++V +ALV+MY KCG++ A F+K+ +LV WN++I A G + AL
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 366
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
FE M R E + P +T VL ACS AG +++G K F S +GI P AEH+ C+
Sbjct: 367 ELFERM---RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 423
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG + + +++ MP P W A L ACR Y + AA+NLF+LDP
Sbjct: 424 VDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKR 483
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VLLSNM+A GRW + +R+ M+ K AG SWI VK+R+H F + D H R
Sbjct: 484 APYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIG 543
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI A L +L + MKAAGY+PDT L+DV++E K T VG+HSEK+A+AF L+ P G PI
Sbjct: 544 EIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPI 603
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+A KFIS +V RE++VRD NRFHRF +G CSC DYW
Sbjct: 604 RVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 6/363 (1%)
Query: 40 GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF 99
G I + F+ D+Y+K DDA +F + +N+ +W ++ F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 100 INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
+ G P + FL+AC+D + +GR + ++ +G + V LV YGK
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
A VF + ++ V+W +M+ Y +N +F +GV P + S L
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
ACA + L G +H ++ + VG+ALV++YGKCG I+ A AF ++ E+N+V
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV 244
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIF 338
W+AI YA D + + M E + PN T V VL AC+ A+++G +I
Sbjct: 245 AWSAISAAYARN---DRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIH 301
Query: 339 YSM-TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ L G++ +V++ + G + A + ++ + +W +L+ +G
Sbjct: 302 ERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLV-LWNSLIATNAQHG 360
Query: 398 KPE 400
+ E
Sbjct: 361 QTE 363
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
G+ N +CN L+D Y KC+ A VF GI KN SW ML + +N + + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+G+ P + IS LSAC + +GRS+ + +E V +ALV +YGK
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLV 319
G DA F +M R++V W+A++ YA GH AL F +M + V PN VTLV
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMD---LDGVAPNKVTLV 181
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
L AC+ G + G + + GI+ G +V+L G+ G ++ A E ++ +
Sbjct: 182 SGLDACASLGDLRSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-V 239
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+ W A+ A Y + + R A L ++D
Sbjct: 240 EKNVVAWSAISAA---YARNDRNRDAIRVLHRMD 270
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 332/579 (57%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A + L TG+ + A +G +D+FV S ++Y+K G DDA K+
Sbjct: 101 PDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKV 160
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M +R+ TW+ ++ V G+P AI+ ++ +RR G E D + + AC+
Sbjct: 161 FDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDA 220
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG+L+R +V + LVD Y K A+ VF+ + +NDVSW +++
Sbjct: 221 RMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQL 280
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q + +F + G+ P + L AC+ + L+LG+S+H ++ +E +
Sbjct: 281 AQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDR 339
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
VG+A++DMY KCGS+ A++ F+K+ R+L+ WN +I G ALS F+EM
Sbjct: 340 MVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMK-- 397
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R E P++ T +LSA S +G VE+G F M +YGI+PG +H C+VDLL R+GLV
Sbjct: 398 RNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLV 457
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A ++ + +PTIS+ ALL+ C K ELG A+ + +L P D G L+SN++
Sbjct: 458 EEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLY 517
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA W + VRK MKD G KK GCS I ++ +H F +D SH ++ +I M+ KL
Sbjct: 518 AAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLD 577
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EM+ GYIP T F +D+EE K + HSE++A AFGL+ PG + + KNLR+CG
Sbjct: 578 SEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCG 637
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K++S I RE++VRD RFH F DG CSC DYW
Sbjct: 638 DCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ + ++ + +A +A G +H L+ DV + S DMY+K GL
Sbjct: 195 MRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGL 254
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F+ MP RN +W+A IS G A+ F ++ +G P+ L A
Sbjct: 255 FDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLA 314
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD LL+LG+ +HGF++R+ + + V ++D Y KC + A+++FD ++ ++ +SW
Sbjct: 315 CSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISW 373
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
M+ + + +F +R V P +S+LSA + +E G+
Sbjct: 374 NVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGK 425
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 215 ISSVLSACARIAGLELGRSVHAVA-VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ +LS+CA + L +HA+ V + + + S L Y + G + AE
Sbjct: 6 LRRLLSSCAALRTLT---RLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATA 62
Query: 274 PER--NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
P ++ WNA++ ++ AL F + A P+ T LSAC+R G +
Sbjct: 63 PTSPSSIPAWNALLAAHSRGASPHEALRVFRALPP---AARPDSTTFTLALSACARLGDL 119
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
G + + G G + + C V++L + G +D A ++ M R ++ W +
Sbjct: 120 ATGEVVTDRAS---GAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVT-WSTM 175
Query: 390 LNACRVYGKP 399
+ G+P
Sbjct: 176 VTGFVNAGQP 185
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 325/582 (55%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A++ + G+ +HA K G V +Y+K G + A
Sbjct: 217 VRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR 276
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M +L T+NA IS + G ++++ F L G P T A + S
Sbjct: 277 HLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFG 336
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LH +V++G D N V L Y + N++ A+ FD + +K SW +M+
Sbjct: 337 HEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMIS 396
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN E +F + V P ISS LSACA++ L LG+ VH + +E
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLEL 456
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++V +AL+DMY KCGSI +A F+ M +N+V WN +I GY G AL +++M
Sbjct: 457 NVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDM- 515
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M P T + VL ACS G V++G +F SMT YGI PG EH C+VDLLGRAG
Sbjct: 516 -MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAG 574
Query: 366 LVDRAYEIIKEMPMRPT-ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
+ A+E+I E P +WGALL AC V+ +L ++A+ LF+L+P ++G +VLLS
Sbjct: 575 QLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLS 634
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++ + ++ EA +VR+E K + K GC+ I + +R H+F A D +H ++ I L
Sbjct: 635 NLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLE 694
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
KL +M AGY PDT ALYDVEEEEK V HSEK+A+AFGL+ PG IRI KNLR
Sbjct: 695 KLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLR 754
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+A K IS + R ++VRD +RFH F DG CSC DYW
Sbjct: 755 VCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 17/428 (3%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+ LHALA+ SG D FV + +Y +DA K+FD +P + WN ++ G
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA----G 198
Query: 90 GRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A++AF+ + G PD T + L A ++ + +GR +H F + G + V
Sbjct: 199 LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
GL+ Y KC ++ A+ +FD + + V++ +++ Y N + ++F G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + +++ + L +HA VKA ++ N V +AL +Y + + A
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
AF+ MPE+ + WNA+I GYA G +MA++ F++M ++ PN +T+ LSAC++
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVR--PNPLTISSALSACAQL 436
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
GA+ G K + + ++ ++D+ + G + A I M + +S W
Sbjct: 437 GALSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVS-WNV 494
Query: 389 LLNACRVYGK-PELGRIAADNL-FKLDPNDSGNHVLLSNMFAAT--GRWEEADLVRKEM- 443
+++ ++G+ E ++ D + L P S LS ++A + G +E V + M
Sbjct: 495 MISGYGLHGQGAEALKLYKDMMDAHLHPTSS---TFLSVLYACSHGGLVKEGTTVFRSMT 551
Query: 444 KDVGIKKG 451
D GI G
Sbjct: 552 SDYGITPG 559
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 332/587 (56%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN++TF KAS L K +H LK+ + D VG +Y++ G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+F+EMP+ ++ W+ I+ G A+D FI +R P+ T + LN
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LG QLHG +V+ GFD ++ V N L+D Y KC ++ A +F + KN+VSW
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V Y E MF A R V + SS L ACA +A ++LG VH +A+K
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+DMY KCG I+ A+ FN+M ++ WNA+I GY+ G AL
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRI 537
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ M C+ PN +T + VLS CS AG +++G + F SM +GI+P EHY C+V L
Sbjct: 538 LDIMKDRDCK--PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G +D+A ++I+ +P P++ +W A+L+A E R +A+ + K++P D +
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATY 655
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+SNM+A +W +RK MK++G+KK G SWI + +H F + H I
Sbjct: 656 VLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLIN 715
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP-IRI 539
ML L + AGY+PD N L D+++EEK + HSE++ALA+GL+ +P I I
Sbjct: 716 GMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILI 775
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCHSA K IS IV R++++RD NRFH F G CSC D+W
Sbjct: 776 MKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 172/390 (44%), Gaps = 23/390 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R CI ND P++ K +H LK G D+F + Y K G
Sbjct: 55 MLRRCIQKND---------------PISAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FDEMPERN N G ++ I + L R G E + F +FL
Sbjct: 100 DKDALNLFDEMPERN----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ LH +V+ G+D N V L++ Y C V A+ VF+GI+ K+ V W
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ YV+N E+ ++ R G P ++ + L A + + + VH +K
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
C + VG L+ +Y + G + DA FN+MP+ ++V W+ +I + G + A+
Sbjct: 276 TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M VPN TL +L+ C+ G ++ + + +K G ++D+
Sbjct: 336 FIRMR--EAFVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDIYVSNALIDV 392
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ +D A ++ E+ + +S W ++
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVS-WNTVI 421
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE N F K +L LH+ +K G + FVG + + YS G
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +F+ + +++ W +S V G ++++ +R G P+ TF L A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +HG ++++ + + V GL+ Y + ++ A VF+ + + V W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + QN +F+ R V P +F +SS+L+ CA LG +H + VK
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I+V +AL+D+Y KC + A F ++ +N V WN +I GY + G A S
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F E ++R + VT L AC+ +++ G+++ + + +K ++D+
Sbjct: 437 FRE--ALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDM 493
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ G + A + EM ++ W AL++ +G LGR A
Sbjct: 494 YAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG---LGRQA 534
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 349/613 (56%), Gaps = 54/613 (8%)
Query: 25 IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+P T K++H A+++G DVFVG + D Y+K GL ++A K+F+ M +++ +WNA ++
Sbjct: 136 VPQT-KEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 194
Query: 85 NAVLGGRPKNAIDAFINLRR-----------------------------------TGGEP 109
G K A + F N+R+ +G P
Sbjct: 195 GYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLP 254
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRS----------GFDGNVSVCNGLVDFYGKC 159
+ +T + L+AC+ G ++H + +++ G D ++ V N L+D Y KC
Sbjct: 255 NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 314
Query: 160 NEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GVEPKDFMI 215
A+ +FD I ++N V+W M+ + Q + + ++F+ E GV P + I
Sbjct: 315 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 374
Query: 216 SSVLSACARIAGLELGRSVHAVAVK--ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
S +L ACA +A + +G+ +HA ++ FV + L++MY KCG + A F+ M
Sbjct: 375 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 434
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+++ + W +++ GY G AL F++M + VP+ +T + VL ACS G V++
Sbjct: 435 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDITFLVVLYACSHCGMVDQ 492
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G+ F SM+ YG+ P AEHYA +DLL R G +D+A++ +K+MPM PT VW ALL+AC
Sbjct: 493 GLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSAC 552
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ EL A + L +++ + G++ L+SN++A GRW++ +R MK GIKK G
Sbjct: 553 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 612
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CSW+ + F D SH + +I A+L L + +KA GY+P+TNFAL+DV+EEEK
Sbjct: 613 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 672
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV E++VRD +RFH
Sbjct: 673 LLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 732
Query: 574 RFWDGYCSCSDYW 586
F +G CSC YW
Sbjct: 733 HFKNGSCSCGGYW 745
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 210/456 (46%), Gaps = 60/456 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + FT P + KA L G H L +G +VF+ + MYS+ G
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
++A +FDE+ +R ++ +WN+ +S V A+D F ++ + T D+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC + +++HG +R+G +V V N L+D Y KC + A VF+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---------------------- 209
+ K+ VSW +M+ Y Q+ + ++F R+E +
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 210 -------------PKDFMISSVLSACARIAGLELGRSVHAVAVKACV----------EGN 246
P I SVLSACA + G +HA ++K C+ + +
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V +AL+DMY KC S + A F+ +P ERN+V W +IGG+A G ++ AL F EM
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLG 362
S PN T+ C+L AC+ A+ G +I ++ L++ + ++ C++++
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQI-HAYVLRHHQYDSSAYFVANCLINMYS 419
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G VD A + M + IS W +++ ++G+
Sbjct: 420 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR 454
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 18/338 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKS----------GQIHDVFVGCSAFDMYSK 57
PN T + A ++L G ++HA +LK+ G+ D+ V + DMYSK
Sbjct: 254 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 313
Query: 58 TGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINL--RRTGGEPDLIT 113
A +FD++P ERN+ TW I G +A+ F+ + G P+ T
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 373
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVR-SGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDG 171
L AC+ + +++G+Q+H +++R +D + V N L++ Y KC +V A+ VFD
Sbjct: 374 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 433
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ K+ +SW SM+ Y + +F R+ G P D VL AC+ ++ G
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493
Query: 232 RS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYA 289
S +++ + + +D+ + G + A MP E V W A++
Sbjct: 494 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 553
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ ++A + ++ M E +Y + + + R
Sbjct: 554 VHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 591
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA L+ Q FV +MYSK G D
Sbjct: 367 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 426
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD M +++ +W + ++ + GR A+D F +R+ G PD ITF L ACS
Sbjct: 427 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486
Query: 124 CSLLQLG 130
C ++ G
Sbjct: 487 CGMVDQG 493
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 333/586 (56%), Gaps = 6/586 (1%)
Query: 4 ECISPNDF---TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
C S ND F C ++ S L I + +H A+K+ + VG + DMY+K G
Sbjct: 236 SCYSENDCPENAFRCA-QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA F+ +P ++ + IS + + A + F+ L R+ P+ + + L A
Sbjct: 295 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L G+Q+H ++ G + ++ V N L+DFY KCN++ + +F + D N+VSW
Sbjct: 355 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V + Q+ E +F + + SSVL ACA A + +H K
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +G++L+D Y KCG I+DA F + ER+++ WNAII GYA G A AL
Sbjct: 475 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M E+ N +T V +LS C G V G+ +F SM + +GIKP EHY C+V L
Sbjct: 535 FDRMNKSNVES--NDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 592
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A + I ++P P+ VW ALL++C ++ LGR +A+ + +++P D +
Sbjct: 593 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 652
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+AA G ++ L+RK M+++G++K G SW+ +K IH F H I
Sbjct: 653 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVIN 712
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GYIPD N L+DV++E+K + HSE++ALA+GL+ PPG PIRI
Sbjct: 713 AMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRIL 772
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C DCH+AF IS IV RE+IVRD NRFH F DG CSC DYW
Sbjct: 773 KNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 195/425 (45%), Gaps = 41/425 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E N F + K + A+ +H+ A K G H+ FVG D YS L
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F+ + ++ W A +S P+NA CA
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR-----------------CA---- 251
Query: 121 CSDCSLLQL--GRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
CSLL + RQ +HG +++ D V L+D Y KC ++ A++ F+ +I +D
Sbjct: 252 -QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE-MIPYDD 309
Query: 178 VSWCSMLVV-YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V S ++ Y Q+ + E ++FL R V P ++ +SSVL AC + L+ G+ +H
Sbjct: 310 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 369
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
A+K E ++FVG+AL+D Y KC + + F+ + + N V WN I+ G++ G +
Sbjct: 370 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 429
Query: 297 ALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
ALS F EM + M C VT VL AC+ ++ +I S+ K
Sbjct: 430 ALSVFCEMQAAQMPC----TQVTYSSVLRACASTASIRHAGQIHCSIE-KSTFNNDTVIG 484
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
++D + G + A ++ + + R IS W A+++ ++G+ AAD L D
Sbjct: 485 NSLIDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISGYALHGQ------AADALELFDR 537
Query: 415 NDSGN 419
+ N
Sbjct: 538 MNKSN 542
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 147/326 (45%), Gaps = 28/326 (8%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +H ++ G + D+F +MY K G A ++FD MPERN+ ++ +
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + A F LR G E + L L +H + G D N
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V +GL+D Y C+ V A+ VF+GI+ K+ V W +M+ Y +N EN F A+
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA---FRCAQS- 253
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
S + +CAR + +H A+K + VG AL+DMY KCG I+DA
Sbjct: 254 --------CSLLAISCAR-------QGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 298
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+AF +P +++ + +I YA + A F + MR +PN +L VL AC+
Sbjct: 299 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL--MRSSVLPNEYSLSSVLQACT 356
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAE 352
++ G +I + IK G E
Sbjct: 357 NMVQLDFGKQIH-----NHAIKIGHE 377
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 162/343 (47%), Gaps = 5/343 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ R + PN+++ + +A + + GKQ+H A+K G D+FVG + D Y+K
Sbjct: 336 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 395
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D + K+F + + N +WN + G + A+ F ++ +T+ + L A
Sbjct: 396 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++ Q+H + +S F+ + + N L+D Y KC + A VF +++++ +SW
Sbjct: 456 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAV 239
+++ Y + + + ++F + VE D ++LS C + G S+ ++ +
Sbjct: 516 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRI 575
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
++ ++ + +V + G+ G + DA +P + + W A++ + +
Sbjct: 576 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 635
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
S E++ + + YV L + +A AG++++ + SM
Sbjct: 636 FSAEKILEIEPQDETTYVLLSNMYAA---AGSLDQVALLRKSM 675
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/558 (40%), Positives = 321/558 (57%), Gaps = 1/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+QLH L SG D + D+Y+ G A ++FD MP+RN+ WN I
Sbjct: 81 GRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A+ + + G EPD T+ L AC+ L+ GR++H + + + +V V
Sbjct: 141 EGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFV 200
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C G+VD Y KC V A+ VFDGI ++ V W SM+ Y QN + G+
Sbjct: 201 CAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGI 260
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + S +SA A A L GR +H + + ++LVDMY K G +Q A +
Sbjct: 261 GPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARV 320
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ +R LV WNA+I GY GHAD AL+ F +M + P+ +T V VLSAC+
Sbjct: 321 LFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKG-DAQVTPDNITFVGVLSACNHG 379
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VE+ + FY M Y IKP +HY CV+D+LG G + AY++IK M + P +WGA
Sbjct: 380 GMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGA 439
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LLN C+++ ELG +A L +L+P D+GN+V LSN++A +G+WE+A VRK M + G+
Sbjct: 440 LLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGL 499
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSWI +K + H F D SH R+ EI L +L M AGY+PD ++V++
Sbjct: 500 KKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDD 559
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+EK V HSE++A+AFGLI+ PPG + +TKNLR+C DCH K IS IV RE+I+RD
Sbjct: 560 DEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRD 619
Query: 569 NNRFHRFWDGYCSCSDYW 586
NR+H F +G CSC DYW
Sbjct: 620 VNRYHHFVNGECSCKDYW 637
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 5/314 (1%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L +C L+ GRQLHG L+ SG + + LVD Y C +VG A+ +FDG+ +
Sbjct: 67 SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W ++ Y + E +++ GVEP +F VL ACA + LE GR VH
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++FV + +VDMY KCG + DA F+ + R+ V WN++I Y G
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL+ +M + P TLV +SA + A A+ +G ++ + + G +
Sbjct: 247 EALALCRDMAANGIG--PTIATLVSAVSAAADAAALPRGREL-HGFGWRRGFGLQDKLKT 303
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+VD+ ++G V A + +++ R +S W A++ ++G + +A N K D
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVS-WNAMICGYGMHGHADEA-LALFNKMKGDAQ 361
Query: 416 DSGNHVLLSNMFAA 429
+ +++ + +A
Sbjct: 362 VTPDNITFVGVLSA 375
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 164/345 (47%), Gaps = 6/345 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P++FT+P + KA +AL TG+++H + DVFV DMY+K G
Sbjct: 154 MVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGC 213
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD + R+ WN+ I+ GRP A+ ++ G P + T + ++A
Sbjct: 214 VDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSA 273
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D + L GR+LHGF R GF + LVD Y K V +A+V+F+ ++ + VSW
Sbjct: 274 AADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSW 333
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+M+ Y + + +F + + V P + VLSAC +E + + V
Sbjct: 334 NAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMV 393
Query: 240 KA-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
A ++ + + ++D+ G G ++A M E + W A++ G + ++
Sbjct: 394 NAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELG 453
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+ +++ + E NYV L + +++G EK ++ MT
Sbjct: 454 ELALQKLIELEPEDAGNYVHLSNIY---AQSGKWEKAARVRKLMT 495
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+S+L +C L GR +H + + + + + + LVD+Y CG + A F+ MP+
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
RN+ WN +I YA +G + A+ + M E P+ T VL AC+ +E G
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVE--PDNFTYPLVLKACAALLDLETGR 183
Query: 336 KIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
++ ++ G + G + + C VVD+ + G VD A + + +R + VW +++ A
Sbjct: 184 EVHQRVS---GTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAV-VWNSMIAAY 239
Query: 394 RVYGKP 399
G+P
Sbjct: 240 GQNGRP 245
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/593 (40%), Positives = 356/593 (60%), Gaps = 12/593 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ CISP++F + ++L + G+Q+H A+K G D V + MY G
Sbjct: 467 MRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGA 526
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPK-NAIDAFINLRRTGGEPDLITFCAFLN 119
+ ++ ++F+ M E ++ +WN+ + V P +++ F N+ R+G P+ +TF L+
Sbjct: 527 RSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLS 586
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A S S+L+LG+Q+H +++ G + +V N L+ Y K ++ + +F + + D V
Sbjct: 587 ALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAV 646
Query: 179 SWCSMLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW SM+ Y+ N +E C + + ++ F I VL+ACA +A LE G +HA
Sbjct: 647 SWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSI--VLNACASVAALERGMEMHA 704
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+++ +E ++ V SAL+DMY KCG I A FN M ++N WN++I GYA G +
Sbjct: 705 FGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEK 764
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL FEEM R A P++VT V VLSACS AG V++G+ ++ M +GI P EHY+C
Sbjct: 765 ALEIFEEMQ--RNGACPDHVTFVSVLSACSHAGLVDRGLD-YFEMMEDHGILPHIEHYSC 821
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY---GKPELGRIAADNLFKLD 413
V+DLLGRAG + + E I MPM+P +W +L ACR + +LG+ A+ L +L+
Sbjct: 822 VIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELE 881
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + N+VL SN +AATGRWE+ R M +KK AG SW+++ + +H F A D SH
Sbjct: 882 PQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSH 941
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
EI L L +++K AGY+P T FALYD+EEE K + +HSEK+A+AF L
Sbjct: 942 PNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSS 1001
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
VPIRI KNLR+CGDCH+AF++IS IV R++I+RD+ RFH F DG CSC DYW
Sbjct: 1002 DVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 197/393 (50%), Gaps = 11/393 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+ PN+ TF L A+S L +G Q+ A LKSG D++VG + +++ G+ D+
Sbjct: 265 LRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDE 323
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F + ERN T N I V + A+ F+ R + + TF L+A ++
Sbjct: 324 AKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSF-VVNTDTFVVLLSAVAE 382
Query: 124 CSL----LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
S+ L GR++HG ++R+G D +++ NGLV+ Y KC + A VF + ++ V
Sbjct: 383 FSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRV 442
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +++ V QN E + R+ + P +F S LS+CA + L G+ VH A
Sbjct: 443 SWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDA 502
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK ++ + V +ALV MYG CG+ ++ FN M E ++V WN+I+G HA A
Sbjct: 503 VKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMV-SSHAPTAE 561
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
S MR PN VT V +LSA S +E G ++ +++ LK+G ++
Sbjct: 562 SVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQV-HAVVLKHGAIEDNAVDNALM 620
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++G +D ++ M R W ++++
Sbjct: 621 SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMIS 653
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 24/380 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
++LH +K G HD+F+ ++Y+K A ++FD M ERN +W +S VL
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 90 GRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDC--SLLQLGRQLHGFLVRSGFDG 144
G A F + G E P TF + L AC D LL Q+HG + ++ +
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 145 NVSVCNGLVDFYGKCNEVGL---AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
N +VCN L+ YG C+ VGL A+ VFD ++ ++W +++ VY + + +F+
Sbjct: 196 NTTVCNALISMYGNCS-VGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254
Query: 202 TARREG----VEPKDFMISSVLSACARIAGLELG--RSVHAVAVKACVEGNIFVGSALVD 255
+ + P + S+++A + ++ G V A +K+ +++VGSALV
Sbjct: 255 AMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVS 313
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
+ + G + +A+ F + ERN V N +I G Q ++ A+ F R V N
Sbjct: 314 AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF---MGTRDSFVVNT 370
Query: 316 VTLVCVLSACSRAGAVEKGM---KIFYSMTLKYG-IKPGAEHYACVVDLLGRAGLVDRAY 371
T V +LSA + E G+ + + L+ G I +V++ + G +D+A
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430
Query: 372 EIIKEMPMRPTISVWGALLN 391
+ + + R +S W +++
Sbjct: 431 RVFRLLCARDRVS-WNTIIS 449
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 11/279 (3%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+LH LV+ G ++ + N LV+ Y K + + A+ VFDG++++N VSW ++ YV +
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 192 EEENGCQMFLTARREGVE---PKDFMISSVLSACARIAG---LELGRSVHAVAVKACVEG 245
+ ++F EG E P F SVL AC + AG L VH + K
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRAC-QDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 246 NIFVGSALVDMYGKC--GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N V +AL+ MYG C G A+ F+ P R+L+ WNA++ YA +G+ + F
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255
Query: 304 MT--SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M E PN T +++A S + + ++ LK G + +V
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAF 315
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
R G++D A +I + R +++ G ++ + + E
Sbjct: 316 ARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEE 354
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/526 (41%), Positives = 320/526 (60%), Gaps = 5/526 (0%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR---TGGEPDLITFCAFLNA 120
A +FD MP R+ +W+A +S G+P+ A+ + + R + G + T + L A
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAA 171
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ + GR+LH +VR G D + V + L D Y KC V A+ VFD + ++ VSW
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSW 231
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y + G ++F+ R G++P +F + VL ACA +LG+ VH K
Sbjct: 232 TAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTK 291
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + F SALV MY K G + A F MP+ +LV W A+I GYA G D AL
Sbjct: 292 SRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRY 351
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + C P++VT V VLSAC+ AG V+KG+ IF+S+ +YGI+ A+HYACV+DL
Sbjct: 352 FDMLLRSGCR--PDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDL 409
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L R+GL +RA E+I M ++P +W +LL CR++ L R AA+ LF+++P + +
Sbjct: 410 LSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATY 469
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V L+N++A+ G ++E + R+ M+ GI K SWI V R+H+F D H + ++
Sbjct: 470 VTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVY 529
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL +M+ GY+ DT F L+DVE+E+K ++G+HSE++A+AFG+IA P G PI++
Sbjct: 530 ALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVF 589
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+ K IS IV RE+IVRD+NRFH F +G CSC DYW
Sbjct: 590 KNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 2/312 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G++LH ++ G D V + DMY+K G DDA +FD MP R++ +W A +
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R F+ + R+G +P+ T+ L AC++ + +LG+Q+HG + +S +
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFA 300
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV Y K ++G A VF G+ + VSW +M+ Y QN + + + F R G
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360
Query: 209 EPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P VLSACA ++ G S+ H++ + +E + ++D+ + G + AE
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAE 420
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
N M + N W +++GG + +A + E + + E YVTL + ++
Sbjct: 421 EMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVG 480
Query: 327 RAGAVEKGMKIF 338
VE +I
Sbjct: 481 LFDEVENTRRIM 492
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I PN+FT+ + +A + GKQ+H KS F + MYSK G
Sbjct: 254 MLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGD 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F MP+ +L +W A IS G+P A+ F L R+G PD +TF L+A
Sbjct: 314 MGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSA 373
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C+ L+ G + H G + ++D + A+ + + + + N
Sbjct: 374 CAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKF 433
Query: 179 SWCSML 184
W S+L
Sbjct: 434 LWASLL 439
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCV 321
+ A F++MP R+ W+AI+ +A G AL+ + M A V N T
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L+A + A G ++ + ++ GI A ++ + D+ + G VD A + MP+R
Sbjct: 169 LAAATAARCARAGREL-HCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRD 227
Query: 382 TISVWGALLN 391
+S W A++
Sbjct: 228 VVS-WTAMVE 236
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/587 (38%), Positives = 331/587 (56%), Gaps = 38/587 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE P ++T + AS+ L GKQ+H + + +VF+ + DMY+K G
Sbjct: 146 MQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD + ++NL +WN IS G+P+ I +R +G PD +T + A
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
Y +C V A+ VF +K+ V W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y +N EE+ +F E +EP + +SSV+S+CA++A L G++VH ++
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + N+ V SAL+DMY KCG I DA FN MP RN+V WNA+I G A GH AL
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + + P+ VT + +LSAC +E+G + F S+T ++G+ P +HYAC+V+L
Sbjct: 411 FENMLQQKFK--PDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNL 468
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G +++A +IK M P +W LL+ C G +AA +LF+LDP + +
Sbjct: 469 LGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPY 528
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
++LSNM+A+ GRW++ VR MK +KK AG SWI + N +H F ++D +H + +I
Sbjct: 529 IMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIY 588
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV-PIRI 539
L L +++ G+ P+TN L+DV E+EK + HSEK+ALAFGLI P G+ PIRI
Sbjct: 589 EKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRI 648
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+RIC DCH KF S I+GR++I+RD+NRFH F G CSC+D W
Sbjct: 649 IKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 165/354 (46%), Gaps = 39/354 (11%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+F + Y+K+G + FD MP R+ ++N I+ P+ +++ F ++
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R G EP T + LNA + S L+ G+Q+HG ++ F GNV + N L D Y KC E+
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ +FD + KN VSW M+ Y +N + E + R G P +S++++A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
Y +CG + +A F++ E+++VCW A
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
++ GYA G + AL F EM E P+ TL V+S+C++ ++ G + + ++
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIE--PDSYTLSSVVSSCAKLASLHHGQAV-HGKSI 349
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G+ + ++D+ + G +D A + MP R +S W A++ C G
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS-WNAMIVGCAQNG 402
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--- 304
F+ + L+ +Y K G ++DA+ F+KM +R++ WNA++ YA G ++F+ M
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 305 -------------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIF 338
M+ E P T+V +L+A ++ + G +I
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
S+ ++ + + D+ + G +++A + + + +S W +++ G+
Sbjct: 179 GSIIVR-NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVS-WNLMISGYAKNGQ 236
Query: 399 PE--LGRIAADNLFKLDPNDSGNHVLLSNMFAAT---GRWEEADLVRKEMKDVGI 448
PE +G + L P + V +S + AA GR +EA V E K+ I
Sbjct: 237 PEKCIGLLHQMRLSGHMP----DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/586 (38%), Positives = 331/586 (56%), Gaps = 15/586 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN FT+P + K + L G+Q+H LK+G +V+V DMY+K G
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 488
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+F + E ++ +W A I+ + A++ F ++ G + D I F + ++A
Sbjct: 489 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 548
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L GRQ+H SG+ ++S+ N LV Y +C +V A FD I K++VSW
Sbjct: 549 CAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSW 608
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ + Q+ E +F + G+E F S +SA A IA + +G+ +H + K
Sbjct: 609 NSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRK 668
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +AL+ +Y KCG+I D + WN++I GY+ G AL
Sbjct: 669 TGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKL 715
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M + + +PN+VT V VLSACS G V++G+ F SM+ + + P EHYACVVDL
Sbjct: 716 FEDMKQL--DVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDL 773
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+GL+ RA ++EMP++P VW LL+AC V+ ++G AA +L +L+P DS +
Sbjct: 774 LGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATY 833
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+SNM+A +G+W+ D R+ MKD G+KK G SW+ V N +H F A D +H R I
Sbjct: 834 VLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIY 893
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L GY+P N L D E +K HSE++A+AFGL+++ P+ +
Sbjct: 894 EYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVF 953
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ K +S I R +IVRD+ RFH F G CSC DYW
Sbjct: 954 KNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 171/363 (47%), Gaps = 19/363 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLH L LK G + +V + +YS++G A+++F M +R+ ++N+ IS
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F + +PD +T + L+AC+ L G+Q H + +++G ++ V
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y KC+++ A F + Y Q Q+F + EG+
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGI 434
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P F S+L C + +LG +H +K + N++V S L+DMY K G + A
Sbjct: 435 VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALK 494
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ E ++V W A+I GY AL+ F+EM ++ + + +SAC+
Sbjct: 495 IFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKS--DNIGFASAISACAGI 552
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A+++G +I ++ + G +V L R G V AY ++ + +S W +
Sbjct: 553 QALDQGRQI-HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNS 610
Query: 389 LLN 391
L++
Sbjct: 611 LVS 613
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 219/472 (46%), Gaps = 68/472 (14%)
Query: 48 GCSAFDMYSKTGLKDDADKMFDEMPERNLATW----NAYISNAVLGGRPKNAIDAFINLR 103
G D Y G + A +FDEMP R+L+ W N +I+ ++G P F +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVP----GLFRRML 155
Query: 104 RTGGEPDLITFCAFLNACSDCSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
E D F L CS ++ + Q+H + SGF+ + +CN L+D Y K +
Sbjct: 156 TKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFL 215
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
AK VF+ + ++ VSW +M+ QN EE +F VLSAC
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSAC 261
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
++ E G+ +H + +K +V +ALV +Y + G++ AE F+ M +R+ V +N
Sbjct: 262 TKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYN 321
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
++I G A QG+ + AL+ F++M ++ C+ P+ VT+ +LSAC+ GA+ G K F+S
Sbjct: 322 SLISGLAQQGYINRALALFKKM-NLDCQK-PDCVTVASLLSACASVGALPNG-KQFHSYA 378
Query: 343 LKYG--------------------IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-- 380
+K G IK E + C G+ ++++++I +M +
Sbjct: 379 IKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC----YGQLDNLNKSFQIFTQMQIEGI 434
Query: 381 -PTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEAD 437
P + ++L C G +LG + K N + VL+ +M+A G+ + A
Sbjct: 435 VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI-DMYAKHGKLDHAL 493
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
+ + +K+ + SW ++ A T H++ TE + +++++
Sbjct: 494 KIFRRLKENDV-----VSWTAMI-------AGYTQHDKFTEALNLFKEMQDQ 533
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 194/423 (45%), Gaps = 39/423 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +C P+ T L A +++ GKQ H+ A+K+G D+ V S D+Y K
Sbjct: 343 MNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSD 402
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + F + L N + F ++ G P+ T+ + L
Sbjct: 403 IKTAHEFF--LCYGQLDNLN-------------KSFQIFTQMQIEGIVPNQFTYPSILKT 447
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LG Q+H ++++GF NV V + L+D Y K ++ A +F + + + VSW
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSW 507
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q+ + +F + +G++ + +S +SACA I L+ GR +HA +
Sbjct: 508 TAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCL 567
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ +G+ALV +Y +CG +++A AF+++ ++ V WN+++ G+A G+ + AL+
Sbjct: 568 SGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNI 627
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M E N T +SA + V G +I + M K G E ++ L
Sbjct: 628 FAQMNKAGLEI--NSFTFGSAVSAAANIANVRIGKQI-HGMIRKTGYDSETEVSNALITL 684
Query: 361 LGRAGLVD---------------------RAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
+ G +D + +E +K++ + P + +L+AC G
Sbjct: 685 YAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLV 744
Query: 400 ELG 402
+ G
Sbjct: 745 DEG 747
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 41/384 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA + SG F+ D+Y K G A K+F+ + R+ +W A IS
Sbjct: 184 EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMIS----- 238
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAF-LNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +N + E ++ FC L+AC+ + G+QLHG +++ GF V
Sbjct: 239 GLSQNGYE----------EEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYV 288
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN LV Y + + A+ +F + ++ VS+ S++ Q +F +
Sbjct: 289 CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 348
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++S+LSACA + L G+ H+ A+KA + +I V +L+D+Y KC I+ A
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSR 327
F +C+ G D SF+ T M+ E VPN T +L C+
Sbjct: 409 FF--------LCY----------GQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTT 450
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
GA + G +I ++ LK G + + ++D+ + G +D A +I + + +S W
Sbjct: 451 LGATDLGEQI-HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVS-WT 508
Query: 388 ALLNACRVYGKPELGRIAADNLFK 411
A++ + K A NLFK
Sbjct: 509 AMIAGYTQHDK----FTEALNLFK 528
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 239 VKACVEGNIFV-GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ C+ F G L+D Y G + A F++MP R+L CWN I + +
Sbjct: 88 LEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRV 147
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M + E + VL CS + ++ ++ T+ G + +
Sbjct: 148 PGLFRRMLTKNVEF--DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPL 205
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+DL + G + A ++ + + R ++S W A+++ G E
Sbjct: 206 IDLYFKNGFLSSAKKVFENLKARDSVS-WVAMISGLSQNGYEE 247
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/607 (37%), Positives = 339/607 (55%), Gaps = 27/607 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA LK + + FV + DMY+ A
Sbjct: 256 VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHA 315
Query: 65 DKMFDEMPE--RNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNA 120
++FD +PE R L WNA I A GG + AI+ F + G P T L A
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA 375
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + +HG++V+ N V N L+D Y + + A +F I ++ VSW
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435
Query: 181 CSM---------------LVVYVQNYEEENGCQMFLTARREGVE-----PKDFMISSVLS 220
++ LV +Q + L V+ P + + ++L
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLP 495
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
CA +A G+ +H AV+ +E ++ VGSALVDMY KCG + A F+++P RN++
Sbjct: 496 GCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVIT 555
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
WN +I Y G D AL+ F+ M + EA PN VT + L+ACS +G V++G+++F
Sbjct: 556 WNVLIMAYGMHGLGDEALALFDRMVA-NGEATPNEVTFIAALAACSHSGLVDRGLELFQG 614
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKP 399
M YG +P +ACVVD+LGRAG +D AY II M P +S W +L ACR++
Sbjct: 615 MKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNV 674
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
+LGRIAA+ LF+L+P+++ ++VLL N+++A G WE + VR M+ G+ K GCSWI +
Sbjct: 675 KLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIEL 734
Query: 460 KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHS 519
IH F A +++H + ++ A + L E M+ GY+PDT+ L+DV+E EK + +HS
Sbjct: 735 DGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHS 794
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+AFGL+ PPG IR+ KNLR+C DCH A KFIS +VGRE+++RD RFH F DG
Sbjct: 795 EKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGT 854
Query: 580 CSCSDYW 586
CSC DYW
Sbjct: 855 CSCGDYW 861
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 188/399 (47%), Gaps = 34/399 (8%)
Query: 29 GKQLHALALKSGQI---HDVFVGCSAFDMYSKTGLKDDADKMF--DEMPERNLATWNAYI 83
G++ HA ALK G + + F + MY++ GL DDA ++F +L TWN I
Sbjct: 173 GREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMI 232
Query: 84 SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR-SGF 142
S V GGR + A+ ++ G PD +TF + L ACS LL +GR++H F+++
Sbjct: 233 SLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDL 292
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQN-YEEENGCQM 199
N V + LVD Y +V A+ VFD + + + W +M+ Y Q+ +E ++
Sbjct: 293 AANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIEL 352
Query: 200 FLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F E G P + ++ VL ACAR +VH VK + N FV +AL+DMY
Sbjct: 353 FSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYA 412
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT------------- 305
+ G + +A F + R++V WN +I G QG A EM
Sbjct: 413 RLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLE 472
Query: 306 -------SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
RC +PN +TL+ +L C+ A +G +I + +++ ++ + +V
Sbjct: 473 GDDTSVDGQRC--MPNNITLMTLLPGCAVLAAPARGKEI-HGYAVRHALESDLAVGSALV 529
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
D+ + G + A + +P R I+ W L+ A ++G
Sbjct: 530 DMYAKCGCLALARAVFDRLPRRNVIT-WNVLIMAYGMHG 567
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 186/405 (45%), Gaps = 21/405 (5%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADK 66
+ F P K+++AL + + +H +L+ +H V + Y++ G D A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 67 MFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F P R+ ++N+ IS L R +A+DA ++ E T + L ACS
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHL 165
Query: 125 SLL--QLGRQLHGFLVRSGF--DGNVSVC-NGLVDFYGKCNEVGLAKVVF--DGIIDKND 177
+ +LGR+ H F ++ GF G N L+ Y + V A+ +F G +
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ + VQ E Q+ GV P +S L AC+R+ L +GR VHA
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285
Query: 238 AVK-ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGHA 294
+K + N FV SALVDMY + A F+ +PE R L WNA+I GYA G
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345
Query: 295 DMALSSFEEMTSMRCEA--VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
D + E + M EA P+ T+ VL AC+R+ V G + + +K +
Sbjct: 346 DE--EAIELFSRMEAEAGCAPSETTMAGVLPACARS-EVFTGKEAVHGYVVKRDMASNRF 402
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ R G +D A+ I + +R +S W L+ C V G
Sbjct: 403 VQNALMDMYARLGRMDEAHTIFAMIDLRDIVS-WNTLITGCIVQG 446
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/576 (38%), Positives = 338/576 (58%), Gaps = 5/576 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD-VFVGCSAFDMYSKTGLKDDADKM 67
N TF A S + K +HAL + +G HD + VG + MY K G+ +A K+
Sbjct: 498 NHVTFASALAACSNPECLIESKIVHALIIVAG-FHDFLIVGNALVTMYGKLGMMMEAKKV 556
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-L 126
MP+ + TWNA I P A+ A+ +R G + IT + L ACS L
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 616
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+ G +H +V +GF+ + V N L+ Y KC ++ + +FDG+ +K+ ++W +M+
Sbjct: 617 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 676
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ E ++F R GV F S L+A A +A LE G+ +H + +K E +
Sbjct: 677 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 736
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ V +A +DMYGKCG + D + R+ + WN +I +A G A +F EM
Sbjct: 737 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEM-- 794
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
++ P++VT V +LSAC+ G V++G+ + SMT ++G+ PG EH C++DLLGR+G
Sbjct: 795 LKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGR 854
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A IKEMP+ P W +LL ACR++G EL R A++L +LDP+D +VL SN+
Sbjct: 855 LSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNV 914
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
A +G+WE+ + +RKEM IKK CSW+ +K+++H F + H + + I A L +L
Sbjct: 915 CATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGEL 974
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+ K AGY+PDT+FAL+D++EE+K + +HSE++ALAFGLI P +RI KNLR+C
Sbjct: 975 MKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVC 1034
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
GDCHS +KF+SGIVGR++++RD RFH F G CSC
Sbjct: 1035 GDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
+ PN F L A S + ++ G Q+H +K+G + DV+VG + Y GL +A
Sbjct: 191 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 250
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+F+EMP+ N+ +W + + G P ++ + +R+ G + TF ++C
Sbjct: 251 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 310
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LG Q+ G +++ GF+ +VSV N L+ + + V A VFD + + + +SW +M+
Sbjct: 311 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 370
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y + + F R E +SS+LS C+ + L+ GR +H + VK ++
Sbjct: 371 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 430
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
N+ + + L+ +Y + G +DAE+ F M ER+L+ WN+++ Y G L E+
Sbjct: 431 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 490
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M V N+VT L+ACS + + KI +++ + G +V + G+
Sbjct: 491 LQMG--KVMNHVTFASALAACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKL 547
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G++ A ++++ MP +P W AL+
Sbjct: 548 GMMMEAKKVLQTMP-QPDRVTWNALI 572
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 199/399 (49%), Gaps = 7/399 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E +S N TF + + L V G Q+ ++ G V V S M+S
Sbjct: 288 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 347
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +FD M E ++ +WNA IS G + ++ F +R E + T + L+
Sbjct: 348 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 407
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ GR +HG +V+ G D NV +CN L+ Y + A++VF + +++ +SW
Sbjct: 408 CSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 467
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ + +G ++ + G +S L+AC+ L + VHA+ +
Sbjct: 468 NSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIV 527
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + VG+ALV MYGK G + +A+ MP+ + V WNA+IGG+A + A+ +
Sbjct: 528 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 587
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEK-GMKIFYSMTLKYGIKPGAEHYACVV 358
++ +R + +P NY+T+V VL ACS + K GM I + L G + ++
Sbjct: 588 YK---LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLI 643
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G ++ + I + + I+ W A++ A +G
Sbjct: 644 TMYAKCGDLNSSNYIFDGLGNKSPIT-WNAMVAANAHHG 681
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 186/388 (47%), Gaps = 8/388 (2%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N FP K S + + GK LHA + +F + +MYSK G + A +F
Sbjct: 95 NAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 152
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL- 127
DEM RN A+W+ +S V G + A+ F + G EP+ + + ACS +
Sbjct: 153 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 212
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G Q+HGF+V++G G+V V LV FYG V A+ +F+ + D N VSW S++V Y
Sbjct: 213 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY 272
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ ++ R+EGV ++V S+C + LG V ++ E ++
Sbjct: 273 SDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 332
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++L+ M+ S+++A F+ M E +++ WNA+I YAH G +L F M +
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 392
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E N TL +LS CS ++ G I + + +K G+ ++ L AG
Sbjct: 393 HNET--NSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKLGLDSNVCICNTLLTLYSEAGRS 449
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRV 395
+ A + + M R IS W +++ AC V
Sbjct: 450 EDAELVFQAMTERDLIS-WNSMM-ACYV 475
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 15/286 (5%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L S+ + G+ LH F + + + N L++ Y K + A+ VFD + +N+
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 178 VSWCSMLVVYVQN--YEEENG--CQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGR 232
SW +ML YV+ YEE G CQM+ GVEP FM++S+++AC+R + + G
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGL----GVEPNGFMVASLITACSRSGYMADEGF 216
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH VK + G+++VG+ALV YG G + +A+ F +MP+ N+V W +++ GY+ G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276
Query: 293 HADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ L+ ++ MR E V N T V S+C G ++ ++YG +
Sbjct: 277 NPGEVLNVYQR---MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL-GHIIQYGFEDSV 332
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ + V+ A + M IS W A+++A +G
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMNECDIIS-WNAMISAYAHHG 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++ + F+F A++ L + G+QLH L +K G D+ V +A DMY K G
Sbjct: 693 MRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGE 752
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D KM + R+ +WN IS G + A + F + + G +PD +TF + L+A
Sbjct: 753 MHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSA 812
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK-VVFDGIIDKNDV 178
C+ L+ G + + R G + C ++D G+ + A+ + + + ND+
Sbjct: 813 CNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDL 872
Query: 179 SWCSML 184
+W S+L
Sbjct: 873 AWRSLL 878
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 337/560 (60%), Gaps = 3/560 (0%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ G+ LH A+K+ ++ + DMYSK+G + A ++F+ M ER++ +W + I+
Sbjct: 268 LLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 327
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G ++ F + + G PD+ T L+AC+ LL+ G+ +H ++ + ++
Sbjct: 328 AREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDL 387
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N L+D Y KC +G A VF + K+ VSW +M+ Y +N +F+ +
Sbjct: 388 FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYN 447
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+P ++ +L ACA +A LE G+ +H ++ + V +ALVDMY KCG++ A
Sbjct: 448 S-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 506
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F+ +PE++LV W +I GY G+ A+++F EM + E P+ V+ + +L ACS
Sbjct: 507 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE--PDEVSFISILYACS 564
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+G +++G F M I+P +EHYAC+VDLL RAG + +AY+ IK MP+ P ++W
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
GALL CR+Y +L A+++F+L+P ++G +VLL+N++A +WEE +R+ +
Sbjct: 625 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G++K GCSWI +K ++HIF D+SH +I+ +L K R MK G+ P +AL
Sbjct: 685 GLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 744
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
++ EK + HSEKIA+AFG++++PPG +R+TKNLR+CGDCH KF+S +V R++I+
Sbjct: 745 DDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIIL 804
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+NRFH F DG CSC +W
Sbjct: 805 RDSNRFHHFKDGSCSCRGHW 824
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 50 SAFDMYSKTGLK--DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG 107
S F + G++ + A K+FDE+ +R++ +WN+ IS V G + +D F + G
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
DL T + + CS+ +L LGR LHG+ +++ F +++ N L+D Y K + A
Sbjct: 248 NTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQ 307
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF+ + +++ VSW SM+ Y + + ++F +EG+ P F I+++L ACA
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G+ VH + ++ ++FV +AL+DMY KCGS+ DA F++M +++V WN +IGG
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y+ + AL+ F E M+ + PN +T+ C+L AC+ A+E+G +I + L+ G
Sbjct: 428 YSKNSLPNEALNLFVE---MQYNSKPNSITMACILPACASLAALERGQEI-HGHILRNGF 483
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+VD+ + G + A + +P + +S W ++ ++G
Sbjct: 484 SLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS-WTVMIAGYGMHG 532
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 3/335 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E ISP+ FT + A + + GK +H ++ D+FV + DMY+K G
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F EM +++ +WN I P A++ F+ ++ +P+ IT L A
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYN-SKPNSITMACILPA 461
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L+ G+++HG ++R+GF + V N LVD Y KC +GLA+++FD I +K+ VSW
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
M+ Y + F R G+EP + S+L AC+ L+ G + +
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 581
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
C+E + +VD+ + G++ A MP E + W A++ G +A
Sbjct: 582 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAE 641
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E + + E YV L + + + V+K
Sbjct: 642 KVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKK 676
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 186/428 (43%), Gaps = 82/428 (19%)
Query: 76 LATWNAYISNAVLGGR--PKNAIDAFI--------------NLRRT------GGEPDL-- 111
L + N Y S A +G P ID I NLRR +PDL
Sbjct: 42 LVSSNLYHSCATIGTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLEL 101
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFL------------------------VRSG---FDG 144
T+C+ L C+D +Q GR++H + +R G FD
Sbjct: 102 RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161
Query: 145 ----NVSVCNGLVDFYGKC-------------NEVGLAKV-----VFDGIIDKNDVSWCS 182
V + N L++ Y K E+G+ +V +FD + D++ +SW S
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ YV N E G +F G+ + SV++ C+ L LGR++H A+KA
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + + L+DMY K G++ A F M ER++V W ++I GYA +G +DM++ F
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 303 EMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM E + P+ T+ +L AC+ G +E G K ++ + ++ ++D+
Sbjct: 342 EMEK---EGISPDIFTITTILHACACTGLLENG-KDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
+ G + A+ + EM ++ +S W ++ Y K L A + ++ N N +
Sbjct: 398 AKCGSMGDAHSVFSEMQVKDIVS-WNTMIGG---YSKNSLPNEALNLFVEMQYNSKPNSI 453
Query: 422 LLSNMFAA 429
++ + A
Sbjct: 454 TMACILPA 461
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 342/567 (60%), Gaps = 31/567 (5%)
Query: 37 LKSGQIHDVFVGCSAFDM---------------YSKTGLKDDADKMFDEMPERNLATWNA 81
L+ G+I + C FDM Y + G +A +FDEMP RN+ +W
Sbjct: 233 LQEGRIDE---ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTT 289
Query: 82 YISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL-VRS 140
I+ V +D L E + +++ A L ++C L +L + ++S
Sbjct: 290 MITGYV----QNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS 345
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
V CN ++ +G+ EV A+ VFD + +K++ +W +M+ VY + E + ++F
Sbjct: 346 -----VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELF 400
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+REG+ P + SVLS CA +A L+ GR +HA V++ + +++V S L+ MY KC
Sbjct: 401 RMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKC 460
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G++ A+ F++ +++V WN+II GYA G AL F +M +P+ VT V
Sbjct: 461 GNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHF--SGIMPDDVTFVG 518
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VLSACS G V+KG++IF SM KY ++ EHYAC+VDLLGRAG ++ A ++I++MPM
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPME 578
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
+WGALL ACR + K +L +AA L L+P ++G +LLSN++A+ GRW++ +R
Sbjct: 579 ADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELR 638
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS-HERNTEIQAMLTKLREEMKAAGYIPDT 499
+ M+D + K GCSWI V+ ++H F D+S H ++EI +L L ++ AGY PD
Sbjct: 639 RNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQ 698
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
+F L+DV+EEEK+ + +HSEK+A+A+GL+ IP G+PIR+ KNLR+CGDCH+A K I+ +
Sbjct: 699 SFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKV 758
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
GRE+I+RD NRFH F DG CSC DYW
Sbjct: 759 TGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 153/363 (42%), Gaps = 63/363 (17%)
Query: 50 SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
S YS+ G + A +FDEM ++N+ +WN+ ++ RP+ A + F + E
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM----SER 158
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
+ I++ ++ + ++ R++ + + NV +V Y K + A+ +F
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLF 214
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
+ +KN VSW ML +Q + C++F D M
Sbjct: 215 WQMPEKNVVSWTVMLGGLLQEGRIDEACRLF-----------DMM--------------- 248
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
E ++ + ++ Y + G + +A + F++MP RN+V W +I GY
Sbjct: 249 -------------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
D+A FE M N V+ +L + G +++ ++F +M +K +
Sbjct: 296 QNQQVDIARKLFEVMPE------KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC 349
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
A ++ G+ G V +A ++ +M + W A++ +VY + L + A L
Sbjct: 350 NA-----MILCFGQNGEVPKARQVFDQMREKDE-GTWSAMI---KVYERKGL-ELDALEL 399
Query: 410 FKL 412
F++
Sbjct: 400 FRM 402
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+ Y + ++ A+VVFD + DKN +SW S++ Y QN + MF
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ ++S ++ + R V E N+ +A+V Y K G I +AE
Sbjct: 162 SWNGLVSGYINN----GMINEAREV----FDRMPERNVVSWTAMVRGYVKEGMISEAETL 213
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +MPE+N+V W ++GG +G D A F+ M + VT ++ + G
Sbjct: 214 FWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPE------KDVVTRTNMIGGYCQVG 267
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ + +F M + + + ++ + VD A ++ + MP + +S W A+
Sbjct: 268 RLVEARMLFDEMPRRNVVS-----WTTMITGYVQNQQVDIARKLFEVMPEKNEVS-WTAM 321
Query: 390 LNACRVYGKPELGRI-AADNLFKLDPNDS 417
L G GR+ A LF P S
Sbjct: 322 LK-----GYTNCGRLDEASELFNAMPIKS 345
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE I PN + + + L G+++HA ++S DV+V MY K G
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD +++ WN+ I+ G A+ F ++ +G PD +TF L+A
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522
Query: 121 CSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS ++ G ++ + + + + +VD G+ ++ A + + + ++ + +
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582
Query: 179 SWCSML 184
W ++L
Sbjct: 583 IWGALL 588
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 342/567 (60%), Gaps = 31/567 (5%)
Query: 37 LKSGQIHDVFVGCSAFDM---------------YSKTGLKDDADKMFDEMPERNLATWNA 81
L+ G+I + C FDM Y + G +A +FDEMP RN+ +W
Sbjct: 233 LQEGRIDE---ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTT 289
Query: 82 YISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL-VRS 140
I+ V +D L E + +++ A L ++C L +L + ++S
Sbjct: 290 MITGYV----QNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS 345
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
V CN ++ +G+ EV A+ VFD + +K++ +W +M+ VY + E + ++F
Sbjct: 346 -----VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELF 400
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+REG+ P + SVLS CA +A L+ GR +HA V++ + +++V S L+ MY KC
Sbjct: 401 RMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKC 460
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G++ A+ F++ +++V WN+II GYA G AL F +M +P+ VT V
Sbjct: 461 GNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHF--SGIMPDDVTFVG 518
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VLSACS G V+KG++IF SM KY ++ EHYAC+VDLLGRAG ++ A ++I++MPM
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPME 578
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
+WGALL ACR + K +L +AA L L+P ++G +LLSN++A+ GRW++ +R
Sbjct: 579 ADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELR 638
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS-HERNTEIQAMLTKLREEMKAAGYIPDT 499
+ M+D + K GCSWI V+ ++H F D+S H ++EI +L L ++ AGY PD
Sbjct: 639 RNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQ 698
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
+F L+DV+EEEK+ + +HSEK+A+A+GL+ IP G+PIR+ KNLR+CGDCH+A K I+ +
Sbjct: 699 SFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKV 758
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
GRE+I+RD NRFH F DG CSC DYW
Sbjct: 759 TGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 153/363 (42%), Gaps = 63/363 (17%)
Query: 50 SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
S YS+ G + A +FDEM ++N+ +WN+ ++ RP+ A + F + E
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM----SER 158
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
+ I++ ++ + ++ R++ + + NV +V Y K + A+ +F
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETLF 214
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
+ +KN VSW ML +Q + C++F D M
Sbjct: 215 WQMPEKNVVSWTVMLGGLLQEGRIDEACRLF-----------DMM--------------- 248
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
E ++ + ++ Y + G + +A + F++MP RN+V W +I GY
Sbjct: 249 -------------PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
D+A FE M N V+ +L + G +++ ++F +M +K +
Sbjct: 296 QNQQVDIARKLFEVMPE------KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC 349
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
A ++ G+ G V +A ++ +M + W A++ +VY + L + A L
Sbjct: 350 NA-----MILCFGQNGEVPKARQVFDQMREKDE-GTWSAMI---KVYERKGL-ELDALEL 399
Query: 410 FKL 412
F++
Sbjct: 400 FRM 402
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 26/269 (9%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+ Y + ++ A+VVFD + DKN +SW S++ Y QN + MF
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ ++S ++ + R V E N+ +A+V Y K G I +AE
Sbjct: 162 SWNGLVSGYINN----GMINEAREV----FDRMPERNVVSWTAMVRGYVKEGMISEAETL 213
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +MPE+N+V W ++GG +G D A F+ M + VT ++ + G
Sbjct: 214 FWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPE------KDVVTRTNMIGGYCQVG 267
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ + +F M + + + ++ + VD A ++ + MP + +S W A+
Sbjct: 268 RLVEARMLFDEMPRRNVVS-----WTTMITGYVQNQQVDIARKLFEVMPEKNEVS-WTAM 321
Query: 390 LNACRVYGKPELGRI-AADNLFKLDPNDS 417
L G GR+ A LF P S
Sbjct: 322 LK-----GYTNCGRLDEASELFNAMPIKS 345
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE I PN + + + L G+++HA ++S DV+V MY K G
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD +++ WN+ I+ G A+ F ++ +G PD +TF L+A
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522
Query: 121 CSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS ++ G ++ + + + + +VD G+ ++ A + + + ++ + +
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582
Query: 179 SWCSML 184
W ++L
Sbjct: 583 IWGALL 588
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 329/562 (58%), Gaps = 8/562 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++H L +G D F+ MYS G D A K+FD+ +R + WNA L G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDCSL--LQLGRQLHGFLVRSGFDGNV 146
+ + + + R G E D T+ L AC S+C++ L G+++H L R G+ +V
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+ LVD Y + V A VF G+ +N VSW +M+ Y +N + + F RE
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 207 GVE--PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ P + SVL ACA +A LE G+ +H ++ ++ + V SALV MYG+CG ++
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ F++M +R++V WN++I Y G+ A+ FEEM + A P VT V VL A
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM--LANGASPTPVTFVSVLGA 395
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS G VE+G ++F +M +GIKP EHYAC+VDLLGRA +D A +++++M P
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VWG+LL +CR++G EL A+ LF L+P ++GN+VLL++++A W+E V+K ++
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
G++K G W+ V+ +++ F + D + +I A L KL E+MK GYIP T LY
Sbjct: 516 HRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY 575
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
++E EEK V HSEK+ALAFGLI G PIRITKNLR+C DCH KFIS + +E+
Sbjct: 576 ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEI 635
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+VRD NRFHRF +G CSC DYW
Sbjct: 636 LVRDVNRFHRFKNGVCSCGDYW 657
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 6/245 (2%)
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+Q+ +E + + + P ++ C + L VH + + +
Sbjct: 53 IQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDP 112
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+ + L+ MY GS+ A F+K +R + WNA+ GH + L + +M +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 308 RCEA---VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E+ YV CV S C+ + KG +I +T + G +VD+ R
Sbjct: 173 GVESDRFTYTYVLKACVASECT-VNHLMKGKEIHAHLT-RRGYSSHVYIMTTLVDMYARF 230
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G VD A + MP+R +S W A++ GK + + + S N V +
Sbjct: 231 GCVDYASYVFGGMPVRNVVS-WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 425 NMFAA 429
++ A
Sbjct: 290 SVLQA 294
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 333/589 (56%), Gaps = 5/589 (0%)
Query: 1 MRRECISPN--DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+R C+ PN T P K++S L P+ G+QLHA +LK + V S +Y+K
Sbjct: 59 LRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAK 118
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL A ++FDEMP + W A I+ + G + A+ N G PD T
Sbjct: 119 CGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 178
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ + L G + + G +V V VD Y KC E+ A+ VFD + K+
Sbjct: 179 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 238
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y N +FL + EG++P + ++ LSAC R+ L+LGR +
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 298
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N +G+AL+DMY KCGS +A + F +M +++++ WNA+I G GH +A
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 358
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +M + N T + +L +C+ G ++ G + F++MT Y I P EHY C+
Sbjct: 359 FALVGQMEKSGVKLNDN--TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCM 416
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A++++ +MPM + GALL C+++ EL L L+P +S
Sbjct: 417 VDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNS 476
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+V+LSN+++ GRWE+A +R +MK G++K CSW+ + ++H F+ D SH +
Sbjct: 477 GNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 536
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L EMK GY P T ++DVE+EEK + HHSEK+A+AF L+ PG I
Sbjct: 537 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETI 596
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+TKNLR+C DCH+A K +S I RE+IVRDNNRFH F DG CSC+DYW
Sbjct: 597 RVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 330/586 (56%), Gaps = 32/586 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ FTF L + G+Q+HA +++ ++ V MYS+ G + A
Sbjct: 274 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 333
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ M ERN +WN+ I G + A+ F ++ G +PD + + L++C S
Sbjct: 334 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 393
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSM 183
Q GR+LH F+VR+ + + LVD Y KC + A V+D I D+N W S+
Sbjct: 394 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSI 453
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y ++ FL +E + V +
Sbjct: 454 LAGYANKGLKKESFNHFLEMLESDIE-------------------------YDVLTMVTI 488
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +ALVDMY KCG+I A F+ M +N+V WNA+I GY+ G + AL +EE
Sbjct: 489 VNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEE 548
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN VT + +LSACS G VE+G++IF SM Y I+ AEHY C+VDLLGR
Sbjct: 549 MP--KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 606
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG ++ A E +++MP+ P +S WGALL ACRV+ ++GR+AA LF+LDP + G +V++
Sbjct: 607 AGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++AA GRW+E + +R+ MK G+KK G SWI + + I IF A +H + EI L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH---HSEKIALAFGLIAIPPGVPIRIT 540
L + K GYIPDT+F L +V++ ++ E + HSE++AL+ GLI++P IR+
Sbjct: 727 RHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVF 786
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+A KFIS I GR +I RD NRFH F +G CSC DYW
Sbjct: 787 KNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 9/368 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---ADKMFDEMPERNLATWNAYISN 85
GK +H + +G D ++ +Y+++G DD A K+F+EMPERNL WN I
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
A F + + G PD TF + L C G+Q+H L+ GF G+
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR- 204
V N L+D Y KC++ VFD + ++N V+W S++ Q + +FL +
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269
Query: 205 -REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+G++P F +++L+ CA GR +HA ++A + NI V + LV MY +CG +
Sbjct: 270 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 329
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A+ FN+M ERN WN++I GY G AL F++M + P+ +L +LS
Sbjct: 330 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK--PDCFSLSSMLS 387
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP-T 382
+C +KG ++ ++ ++ ++ +VD+ + G +D A+++ + +
Sbjct: 388 SCVSLSDSQKGREL-HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRN 446
Query: 383 ISVWGALL 390
++W ++L
Sbjct: 447 TALWNSIL 454
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 23/352 (6%)
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVV 168
+ + + + C D + Q G+ +H ++ +G++ + + ++ Y + +++ A+ +
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 169 FDGIIDKNDVSWCSMLVVY--VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
F+ + ++N +W +M++ Y V +Y E G +F + GV P +F +S L C +
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEAWG--IFDRMLKIGVCPDNFTFASALRVCGALR 189
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
+ G+ VH+ + +G+ FVG+AL+DMY KC + F++M ERN V WN+II
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
A GH + AL F M P+ T +L+ C+ +G +I ++ ++
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI-HAHLIRAN 308
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL----------NACRVY 396
I +V + G ++ A EI M R S W +++ A R++
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS-WNSMIEGYQQNGETQEALRLF 367
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
+ +L I D F L S V LS+ + GR +VR M++ GI
Sbjct: 368 KQMQLNGIKPD-CFSLSSMLSSC-VSLSD--SQKGRELHNFIVRNTMEEEGI 415
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 148/336 (44%), Gaps = 29/336 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P+ F+ + + +L G++LH +++ + + DMY+K G
Sbjct: 370 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 429
Query: 61 KDDADKMFDEM--PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
D A K++D+ +RN A WN+ ++ G K + + F+ + + E D++T +
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 489
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
N LL L LVD Y KC + A+ VFD + KN V
Sbjct: 490 N------LLVLE-------------------TALVDMYSKCGAITKARTVFDNMNGKNIV 524
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAV 237
SW +M+ Y ++ + ++ ++G+ P + ++LSAC+ +E G R ++
Sbjct: 525 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 584
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+E + +VD+ G+ G ++DA+ KMP E + W A++G DM
Sbjct: 585 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDM 644
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ + + + + YV + + +A R VE
Sbjct: 645 GRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVE 680
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 362/656 (55%), Gaps = 72/656 (10%)
Query: 1 MRRECIS----PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS 56
M RE +S P FT + + +A+ G+++H+ +K G + V S +MY+
Sbjct: 132 MFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYA 191
Query: 57 KTG-------------------------------LKDDADKMFDEMPERNLATWNAYISN 85
K+G L D A F++M ER++ +WNA IS
Sbjct: 192 KSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISG 251
Query: 86 AVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G + A+D F L + +PD T + L+AC++ L+LG+Q+H ++R+ FD
Sbjct: 252 YNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDT 311
Query: 145 NVSVCNGLVDFYGKCN---------------------------------EVGLAKVVFDG 171
+V N L+ Y K ++ A+ +FD
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDS 371
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ ++ V+W +M+V YVQN ++ ++F + +EG +P ++ ++++LS + +A L+ G
Sbjct: 372 LRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHG 431
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAH 290
R +HA A ++ ++ V +AL+ MY K GSI DA FN + +R+ + W ++I A
Sbjct: 432 RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQ 491
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G + AL+ FE M + P+++T V VLSAC+ G VE+G + M + I P
Sbjct: 492 HGLGEEALTLFERMLENGIK--PDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPT 549
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
HYAC++DL GRAGL+ A+ I+ MP+ P + WG+LL +C+V+ EL +AA+ L
Sbjct: 550 PSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLL 609
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
++P +SG + L+N+++A G+WE A +RK MKD G+KK G SW+ +KN++HIF D
Sbjct: 610 LIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDD 669
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
H + I M+ K+ +E+K G++PDT L+D+EEE K + HHSEK+A+AFGLI
Sbjct: 670 GLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLIC 729
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P +RI KNLR+C DCHSA KFIS +VGRE+IVRD RFH F +G CSC DYW
Sbjct: 730 TPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 204/490 (41%), Gaps = 100/490 (20%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SP+D + + S P TGK +HA +K+G VF+ + + Y+KTG DA +
Sbjct: 11 SPSD-PYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHR 69
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPK-------------------------------NA 95
+FDEMP +++ +WN +S GGR + NA
Sbjct: 70 VFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENA 129
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
I F + P T L +C+ L +GR++H F+V+ G +SV N L++
Sbjct: 130 IGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNM 189
Query: 156 YGKCNE-------------------------------VGLAKVVFDGIIDKNDVSWCSML 184
Y K + V LA+V F+ +I+++ VSW +M+
Sbjct: 190 YAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMI 249
Query: 185 VVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
Y Q+ + +F + +P F ++S LSACA + L+LG+ +HA ++
Sbjct: 250 SGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEF 309
Query: 244 EGNIFVGSALVDMYGKCGSIQDAE-------------IAFNKMPE--------------- 275
+ VG+AL+ MY K G ++ A+ IAF + +
Sbjct: 310 DTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIF 369
Query: 276 -----RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
R++V W A+I GY G A+ F M ++ PN TL +LS S +
Sbjct: 370 DSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSM--IKEGPKPNNYTLATMLSVSSSLAS 427
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ G +I S T + G ++ + ++G ++ A + + + W +++
Sbjct: 428 LDHGRQIHASAT-RSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMI 486
Query: 391 NACRVYGKPE 400
A +G E
Sbjct: 487 IALAQHGLGE 496
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+S+HA +KA + +F+ + L++ Y K G I DA F++MP +++ WN I+ GYA
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G + A FEEM P+ V+ ++ ++ G E + +F M + + P
Sbjct: 92 GGRLEEAHRVFEEMPE------PDSVSWTAMIVGYNQMGQFENAIGMFREM-VSDDVPPT 144
Query: 351 AEHYACVVDLLGRAGLVD------RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
+ ++L V+ + + + + + ISV +LLN G P +I
Sbjct: 145 Q---FTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKI 201
Query: 405 AADNLFKLDPNDSGNHVLLSNM 426
D + KL S N ++ S+M
Sbjct: 202 VFDRM-KLKSTSSWNTMISSHM 222
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/587 (38%), Positives = 339/587 (57%), Gaps = 8/587 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PNDFTF KA L+ G+Q+H + +K+G VG S DMYSK G ++A
Sbjct: 69 VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAA 128
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
MF+ MP RNL +WNA I+ + G + A+ F ++ GG D TF + L ACSD
Sbjct: 129 CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLG 188
Query: 126 LLQLGRQLHGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
++ G Q+H FL+ GF N +V L+D Y KC ++ +A+ VF I +K+ +SW ++
Sbjct: 189 AIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
++ Y Q ++F R ++ F++SS++ A A ++ G+ +HA A+K
Sbjct: 249 ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS 308
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+I V ++++DMY KCG I +AE F++MP RN++ W +I GY G A+ F+E
Sbjct: 309 GVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDE 368
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M E P+ VT + VL CS +G VEKG + F + +GIK EHYAC+VDLLGR
Sbjct: 369 MQLDSTE--PDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG + A ++ MP+ + +W LL+ACRV+G ELG+ L +LD + N+V++
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMM 486
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++A G W+E + +R+ +K +KK AG SW+ + +H F D +H +I +L
Sbjct: 487 SNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEIL 546
Query: 484 TKLREEMKAA-GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI--AIPPGVP-IRI 539
++ MK GY+ +AL+DVEEE KM + HSEK+A+ L+ + G IR+
Sbjct: 547 KEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRV 606
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K +S I+ +VRD NRFHRF DG CSC DYW
Sbjct: 607 FKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 179/366 (48%), Gaps = 13/366 (3%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ + MY K G A +FD M +RN+ +W A + + G P ++ F +
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+G +P+ TF L AC + L +GRQ+H V++GFD V N ++D Y KC +
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A +F+ + +N +SW +M+ Y E +F + G +F +S L AC+
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185
Query: 224 RIAGLELGRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
+ ++ G +HA + N V AL+D+Y KCG + A F+ + E++++ W
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
A+I GYA +G+ ++ F ++ + V ++ L ++ + V++G K ++
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQ-VDGFI-LSSMMGVFADFALVQQG-KQMHAF 302
Query: 342 TLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
+K + G + C ++D+ + G+++ A + EMP R IS W ++ YGK
Sbjct: 303 AIK--VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVIS-WTVMITG---YGKH 356
Query: 400 ELGRIA 405
LG+ A
Sbjct: 357 GLGKEA 362
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 18/329 (5%)
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
GF ++ + N L+ YGKC +G+A VFD ++ +N VSW +++ ++QN +F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
GV+P DF S+ L AC + GL++GR +H + VK + VG++++DMY KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G I +A F MP RNL+ WNA+I GY G + AL F++M + + T
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEV--GGFLDEFTFTS 179
Query: 321 VLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
L ACS GA+++G +I + +T + ++DL + G + A + +
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV---LLSNMFAATGRWEEA 436
+ IS W AL + G + G +A +S V +LS+M G + +
Sbjct: 240 KHVIS-WTAL-----ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMM---GVFADF 290
Query: 437 DLVR--KEMKDVGIKKGAGCSWISVKNRI 463
LV+ K+M IK +G ISV N I
Sbjct: 291 ALVQQGKQMHAFAIKVPSGVD-ISVCNSI 318
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R I + F + + + GKQ+HA A+K D+ V S DMY K G+
Sbjct: 268 LRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGM 327
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+++F EMP RN+ +W I+ G K AI F ++ EPD +T+ A L
Sbjct: 328 INEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLG 387
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G++ L G V +VD G+ + AK + D + ++ N
Sbjct: 388 CSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVG 447
Query: 179 SWCSML 184
W ++L
Sbjct: 448 IWQTLL 453
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/590 (39%), Positives = 333/590 (56%), Gaps = 36/590 (6%)
Query: 31 QLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
Q+HA + +G D FV +F S G A +F + + ++ N I
Sbjct: 53 QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 112
Query: 89 GGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P +A+ + + + PD+ TF L ACS+ L+LG +H + + G+ VS
Sbjct: 113 SPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVS 172
Query: 148 VCNGLVDFYGKCNEVGLAKVVFD-------------------------------GIIDKN 176
V N LV Y C + A +VFD + D++
Sbjct: 173 VSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRD 232
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW M+ YVQ + G +F E +EP + ++ + LSACA + +E G+ +
Sbjct: 233 VVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIER 292
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ V + +G+AL+DMY KCGS++ A F+KM E+N++ W+A+I G A G
Sbjct: 293 YMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKD 352
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL+ F +M + PN VT + +L+ACS + V++G F+SMT YG+KP A H+ C
Sbjct: 353 ALNLFSQMEMQGVK--PNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCC 410
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDL GRAG++D+A +IK MP +P ++WGALLNACR++G ELG L +LDPN
Sbjct: 411 MVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNH 470
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G +VLLSN++AA GRW+ +R+ M++ + K GCS+I + + IH F A D+SH +
Sbjct: 471 GGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQL 530
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
I A L ++ +E+KAAGY PDT L D++EEEK T + HHSEK+A+AFGLI PG
Sbjct: 531 EMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTT 590
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRITKNLR+C DCHSA K IS I RE+IVRD RFH F DG CSC D+W
Sbjct: 591 IRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 41/359 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--- 62
+ P+ TFP L KA S + G+ +H+ K G +V V MY+ GL +
Sbjct: 132 VFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAG 191
Query: 63 ----------------------------DADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
A +MF+ MP+R++ +W+ I+ V R K
Sbjct: 192 LVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKE 251
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
+ F ++ EP+ L+AC+ ++ G+ + ++ R V + L+D
Sbjct: 252 GLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALID 311
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC V A VF + +KN ++W +M+ N + ++ +F +GV+P +
Sbjct: 312 MYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVT 371
Query: 215 ISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+L+AC+ ++ G S H++ ++ N +VD+YG+ G + A+ M
Sbjct: 372 FIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSM 431
Query: 274 P-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN----YVTLVCVLSACSR 327
P + N W A++ A + H D L E++ E PN YV L + +AC R
Sbjct: 432 PFKPNSAIWGALLN--ACRIHGDTELG--EQVGKRLLELDPNHGGRYVLLSNIYAACGR 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 138/343 (40%), Gaps = 38/343 (11%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAK 166
P L+ L S C L+ Q+H + +G + V + ++ F + A+
Sbjct: 30 PQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYAR 89
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG--VEPKDFMISSVLSACAR 224
+F I K D+ + L+ +F + E V P +L AC+
Sbjct: 90 FLFYRI-RKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSE 148
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
I L LG ++H+ K + V + LV MY CG I+ A + F++ PE + WN +
Sbjct: 149 IPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIM 208
Query: 285 IGGYAHQGHADMALSSFEEM----------------------------TSMRCEAV-PNY 315
IGGY G A FE M M E + PN
Sbjct: 209 IGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNE 268
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
LV LSAC+ GA+E+G I M K ++ ++D+ + G V+RA E+
Sbjct: 269 SVLVNALSACAHLGAMEQGQWIERYMERK-NVRLTVRLGTALIDMYSKCGSVERALEVFH 327
Query: 376 EMPMRPTISVWGALLNACRV--YGKPELGRIAADNLFKLDPND 416
+M + ++ W A++N + GK L + + + PN+
Sbjct: 328 KMKEKNVLA-WSAMINGLAINGQGKDALNLFSQMEMQGVKPNE 369
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN+ A + L G+ + + V +G + DMYSK G
Sbjct: 259 MMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGS 318
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F +M E+N+ W+A I+ + G+ K+A++ F + G +P+ +TF LNA
Sbjct: 319 VERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNA 378
Query: 121 CSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-NDV 178
CS L+ G H G N +VD YG+ + A+ V + K N
Sbjct: 379 CSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSA 438
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEP----KDFMISSVLSACAR 224
W ++L + + E G Q + R ++P + ++S++ +AC R
Sbjct: 439 IWGALLNACRIHGDTELGEQ--VGKRLLELDPNHGGRYVLLSNIYAACGR 486
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/612 (36%), Positives = 348/612 (56%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN +TFP + KA++ + + G+ +H + +K+ D+F+ S YS G D A +
Sbjct: 129 PNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLV 188
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F ++ E+++ +WN+ IS V GG P+ A+ F ++ P+ +T L+AC+ L
Sbjct: 189 FSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDL 248
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ GR ++ R+G D N+ + N ++D Y KC + A+ +FD + +K+ VSW +M+ Y
Sbjct: 249 EFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGY 308
Query: 188 ---------------------------VQNYEEENGCQMFLTARRE-----GVEPKDFMI 215
+ +Y++ + L RE +P + +
Sbjct: 309 AKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTL 368
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+S L+ACA++ ++LG +H K ++ N + ++L+DMY KCG ++ A F +
Sbjct: 369 ASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVER 428
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R++ W+A+I G A GH A+ F +M + + PN VT +L ACS +G V++G
Sbjct: 429 RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK--PNAVTFTNLLCACSHSGLVDEGR 486
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F M YG+ PG++HYAC+VD+LGRAG ++ A E+I++MP+ P+ SVWGALL ACR+
Sbjct: 487 LFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRI 546
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
YG EL +A L + D N+ G +VLLSN++A G+W+ +R+ MK G++K GCS
Sbjct: 547 YGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCS 606
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-KMTE 514
I V IH F D SH +TEI + L ++ +K+ GY+ D + L VEEE K
Sbjct: 607 SIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHA 666
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+A+GLI + P PIRI KNLR+CGDCHS K IS + R++++RD RFH
Sbjct: 667 LNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHH 726
Query: 575 FWDGYCSCSDYW 586
F G CSC DYW
Sbjct: 727 FSGGNCSCMDYW 738
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 229/487 (47%), Gaps = 56/487 (11%)
Query: 9 NDFTFPCLF-KASSALHIPVTGKQLHALALKSGQIHD------VFVGCSAFDMYSKTGLK 61
N T P L K ++ H+ KQLHA L++G D +F C+ + S + L
Sbjct: 29 NPSTVPILIDKCANKKHL----KQLHAHMLRTGLFFDPPSATKLFTACA---LSSPSSL- 80
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNA 120
D A K+FD++P NL TWN I +P + FI L + P+ TF + A
Sbjct: 81 DYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKA 140
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ S L G+ +HG ++++ F ++ + N L+ FY ++ A +VF I++K+ VSW
Sbjct: 141 ATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSW 200
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ +VQ E Q+F + E P + VLSACA+ LE GR +
Sbjct: 201 NSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIER 260
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ N+ + +A++DMY KCGS++DA F+KM E+++V W +I GYA G D A
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320
Query: 301 FEEMT------------------------------SMRCEAVPNYVTLVCVLSACSRAGA 330
F+ M + PN VTL L+AC++ GA
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ G I + K GIK ++D+ + G +++A E+ + R + VW A++
Sbjct: 381 MDLGGWIHVYIK-KQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DVFVWSAMI 438
Query: 391 NACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
++G GR A D K+ N V +N+ A +G +E L +M+ V
Sbjct: 439 AGLAMHGH---GRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 447 -GIKKGA 452
G+ G+
Sbjct: 496 YGVVPGS 502
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/560 (42%), Positives = 328/560 (58%), Gaps = 10/560 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYISNAVL 88
KQLH +K+G + + YSK D+A K+F N+ TW A I V
Sbjct: 326 KQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQ 385
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
K A+D F + R G P+ T+ L A SLL QLH ++++ ++ SV
Sbjct: 386 NNNNKKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLS---QLHAQIIKAYYEKVPSV 441
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y K V + VF I K+ V+W +ML Q + E ++F+ +EGV
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 209 EPKDFMISSVLSACARIAG-LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P ++ SSV++AC+ A +E G+ +HA AVK+ + V SAL+ MY K G+I+ AE
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACS 326
F + ER++V WN++I GY G A AL F+ M + + +P + VT + VL+AC+
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQN---QGLPLDDVTFIGVLTACT 618
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VE+G K F M Y I EHY+C+VDL RAG+ D+A +II MP + ++W
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIW 678
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL ACRV+ ELG++AA+ L L PND+ +VLLSN+ A G WEE VRK M +
Sbjct: 679 RTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+KK AGCSWI +KNRI F A D SH + + A L +L ++K GY PDTN+ +DV
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EEE K + HSE++A+A+GLIA+PPG PI+I KNLRICGDCH+ + IS I R +IV
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+NRFH F G CSC YW
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 177/382 (46%), Gaps = 9/382 (2%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
T C K L V G+Q+H +LKSG + DV VG S DMY KT +D +FDE
Sbjct: 105 LTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDE 164
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M +N+ +W + +S G I ++ G P+ TF L A +D S+++ G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H +V++GF+ VCN L+ Y K VG A+ VFD ++ ++ V+W M+ Y
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
G QMF R GV+ + + L C++ L + +H VK E +
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 251 SALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+AL+ Y KC S+ +A F+ N+V W A+IGG+ + A+ F +M+ R
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMS--RE 402
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN+ T VL AG + ++ +K + ++D + G V
Sbjct: 403 GVRPNHFTYSTVL-----AGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVE 457
Query: 370 AYEIIKEMPMRPTISVWGALLN 391
+ + +P + ++ W A+L
Sbjct: 458 SARVFYSIPAKDIVA-WSAMLT 478
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 20/404 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E ++PN FTF + A + I G Q+HA+ +K+G FV + MY K+ +
Sbjct: 196 MQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEM 255
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +FD M R+ TWN I G F +R G + FC L
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-GIIDKNDVS 179
CS L +QLH +V++G++ + L+ Y KC+ V A +F N V+
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +VQN + +F REGV P F S+VL+ L +HA +
Sbjct: 376 WTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQII 431
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA E V +AL+D Y K G++ ++ F +P +++V W+A++ G A ++ A+
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAME 491
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGA-VEKGMKIFYSMTLKYGIKPGAEHYACV 357
F ++ E V PN T V++ACS + A VE G +I + +K G + CV
Sbjct: 492 VFIQLVK---EGVKPNEYTFSSVINACSSSAATVEHGKQIHAT-----AVKSGKSNALCV 543
Query: 358 ----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + + G ++ A ++ R +S W +++ +G
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVS-WNSMITGYGQHG 586
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 5/328 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE P ++++ +N + + + A+ F +L +G D +T L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+GRQ+H ++SGF +VSV LVD Y K + + +FD + KN VSW S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y +N + + + EGV P F ++VL A A + +E G VHA+ VK
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E FV +AL+ MY K + DAE F+ M R+ V WN +IGGYA G L F+
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIG---FYLEGFQM 293
Query: 304 MTSMRCEAVPNYVTLVCV-LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
MR V T+ C L CS+ + K + +K G + + ++
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQREL-NFTKQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ VD A+++ + W A++
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMI 380
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+E + PN++TF + A S+ V GKQ+HA A+KSG+ + + V + MYSK G
Sbjct: 498 KEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI 557
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A+K+F ER++ +WN+ I+ G K A++ F ++ G D +TF L AC
Sbjct: 558 ESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTAC 617
Query: 122 SDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L++ G + +++ D + +VD Y + A + +G+
Sbjct: 618 THAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGM 669
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/590 (37%), Positives = 352/590 (59%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR P+ + AS+ + G Q+HA A+K+G D+ VG S DMY+K
Sbjct: 374 MRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 433
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D +FD+MP++++ +W I+ G A++ F ++ G + D++ + L A
Sbjct: 434 MKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 493
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ +++H +++R G ++ + NG+VD YG+C V A +F+ I K+ VSW
Sbjct: 494 CSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 552
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YV N ++F + GVEP + S+LSA A ++ L+ G+ +H ++
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 612
Query: 241 A--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+EG++ S LVDMY +CG+++ + FN + ++LV W ++I Y G A+
Sbjct: 613 KGFVLEGSL--ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 670
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M E++ P+++ V VL ACS +G + +G + SM +Y ++P EHYAC+
Sbjct: 671 DLFRRMED---ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACL 727
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRA ++ AY+ +K M + PT VW ALL AC+++ ELG IAA L ++DP +
Sbjct: 728 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 787
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+VL+SN+++A RW++ + VR MK G+KK GCSWI V N++H F A+D SH ++
Sbjct: 788 GNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSY 847
Query: 478 EIQAMLTKLREEM-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI + L+++ E++ K GY+ T F L++ +EEEK+ + HSE++A+A+G++ P G
Sbjct: 848 EIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGAS 907
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RITKNLR+CGDCH+ K IS RE+++RD NRFH F G CSC D W
Sbjct: 908 LRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 208/403 (51%), Gaps = 19/403 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I + TFPC+ KA L G ++H LA+K G + VFV S MY+K
Sbjct: 171 MRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 230
Query: 61 KDDADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A ++FD MPE+ ++ +WN+ IS G+ A+ F +++ P+ TF A L
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 290
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC D S ++ G +H +++S + NV V N L+ Y + ++G A +F + D + +S
Sbjct: 291 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 350
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SML +VQN Q + R G +P + S+++A AR G +HA A+
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAM 410
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++ ++ VG++LVDMY K S++ + F+KMP++++V W II G+A G AL
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 470
Query: 300 SFEEMTSMRCEAVPNYVTLV-CVLSACSRAGAVEKGMKIFYSM--TLKYGIKPGAEHYAC 356
F E ++ E + V ++ +L ACS G+K+ S+ Y I+ G
Sbjct: 471 LFRE---VQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLSDLVL 520
Query: 357 ---VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+VD+ G G VD A + + + + +S W +++ +C V+
Sbjct: 521 QNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI-SCYVH 561
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 185/364 (50%), Gaps = 6/364 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+Q+HA + S + + VF+ MY K G DA+K+FD MP + + TWNA I V
Sbjct: 97 GQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYV 156
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G P +++ + +R +G D TF L AC + G ++HG ++ G+ V
Sbjct: 157 TNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVF 216
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N +V Y KCN++ A+ +FD + +K D VSW SM+ Y N + ++F ++
Sbjct: 217 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 276
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ P + + L AC + ++ G +HA +K+ N+FV +AL+ MY + G + +A
Sbjct: 277 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 336
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M + + + WN+++ G+ G AL + EM + P+ V ++ +++A +
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK--PDLVAVISIIAASA 394
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
R+G GM+I ++ +K G+ + +VD+ + + I +MP + +S W
Sbjct: 395 RSGNTLHGMQI-HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVS-W 452
Query: 387 GALL 390
++
Sbjct: 453 TTII 456
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 40/338 (11%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + L C L G+Q+H ++ S +V + LV YGKC + A+ +FDG+
Sbjct: 81 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 140
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
K +W +M+ YV N E +++ R G+ +L AC + G
Sbjct: 141 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGA 200
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQ 291
VH +A+K +FV +++V MY KC + A F++MPE+ ++V WN++I Y+
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + AL F EM + PN T V L AC + +++GM I ++ LK
Sbjct: 261 GQSIEALRLFGEMQ--KASLAPNTYTFVAALQACEDSSFIKQGMFI-HATVLKSSYYINV 317
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
++ + R G + A I M TIS W ++L+
Sbjct: 318 FVANALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG------------------- 357
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
F G + EA EM+D G K
Sbjct: 358 ---------------FVQNGLYHEALQFYHEMRDAGQK 380
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
D SSVL C L G+ VHA + + + ++F+ + LV MYGKCG + DAE F
Sbjct: 78 DEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLF 137
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAG 329
+ MP + + WNA+IG Y G L S E MR +P + T C+L AC
Sbjct: 138 DGMPHKTIFTWNAMIGAYVTNGE---PLGSLELYREMRVSGIPLDACTFPCILKACGLLK 194
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
G ++ + + +K G +V + + ++ A ++ MP + + W ++
Sbjct: 195 DRRYGAEV-HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 253
Query: 390 LNACRVYGK 398
++A G+
Sbjct: 254 ISAYSSNGQ 262
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 356/671 (53%), Gaps = 96/671 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQ----LHALALKSGQIHDVFVGC------- 49
MRR+ P+DFTF + SAL + V +Q +H +K+G +GC
Sbjct: 138 MRRDDFRPDDFTFTSVL---SALVLFVGNEQQCGQMHCAVVKTG------MGCVSSSVLN 188
Query: 50 SAFDMYSKTGLK--------DDADKMFDEMPER--------------------------- 74
+ +Y K + A K+FDEMP+R
Sbjct: 189 ALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA 248
Query: 75 ---NL-ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
NL A WNA IS V G + A+ +R G + D IT+ ++AC++ Q+G
Sbjct: 249 MVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG 308
Query: 131 RQLHGFLVRSGFDGNVSVC----NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+Q+H +++++ + N S C N L+ Y K N+V A+ +F + +N ++W ++L
Sbjct: 309 KQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368
Query: 187 YV-------------------------------QNYEEENGCQMFLTARREGVEPKDFMI 215
YV QN + G ++F R +G EP DF
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+ L+AC+ + LE GR +HA V E ++ VG+A++ MY KCG ++ AE F MP
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+LV WN++I GH A+ F++M ++ P+ +T + VL+ACS AG VEKG
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQM--LKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F SM YGI P +HYA +VDL RAG+ A +I MP +P VW ALL CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G +LG AA+ LFKL P + G +VLLSN++A GRW E VRK M+D ++K CS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACS 666
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
WI V+N++H+F D H + L +L EMK GYIPDT F L+D+E E+K +
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+ FG++ +PPG +R+ KN+RICGDCH+AFKF+S + RE+IVRD RFH F
Sbjct: 727 STHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 576 WDGYCSCSDYW 586
+G CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 144/365 (39%), Gaps = 88/365 (24%)
Query: 118 LNACS--DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID- 174
L CS D + L R +H ++ SGF N L++ Y K + + A+ +F+ I +
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP 77
Query: 175 --------------------------------KNDVSWCSMLVVYVQNYEEENGCQMFLT 202
++ V + +M+ Y N + + ++F
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKA---CVEGNIFVGSALVDMYG 258
RR+ P DF +SVLSA G E +H VK CV ++ +AL+ +Y
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYV 195
Query: 259 K--------CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT----- 305
K C ++ A F++MP+R+ + W +I GY + A FE M
Sbjct: 196 KRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGA 255
Query: 306 -----------------------SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSM 341
MR + + +T ++SAC+ G+ + G ++ ++
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQV-HAY 314
Query: 342 TLKYGIKPGAEHYAC------VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
LK + P H C ++ L + VD A +I MP+R I+ W A+L+
Sbjct: 315 ILKNELNPN--HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT-WNAILSGYVN 371
Query: 396 YGKPE 400
G+ E
Sbjct: 372 AGRME 376
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/588 (38%), Positives = 342/588 (58%), Gaps = 4/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + + T + + + V G +H +K G DVFV + +MYSK G
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R+L +WN+ I+ P A+ F + G PDL+T + +
Sbjct: 299 LQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASI 358
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
S ++GR +HGF+VR + ++ + N LV+ Y K + A+ VF+ + ++ +S
Sbjct: 359 FGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418
Query: 180 WCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W +++ Y QN + + + P S+L A + + L+ G +H
Sbjct: 419 WNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K C+ ++FV + L+DMYGKCG ++DA F ++P+ V WNAII GH + AL
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKAL 538
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F++M + +A +++T V +LSACS +G V++ F +M +Y IKP +HY C+V
Sbjct: 539 QLFKDMRADGVKA--DHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMV 596
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DL GRAG +++AY ++ MP++ S+WG LL ACR++G ELG A+D L ++D + G
Sbjct: 597 DLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVG 656
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN++A G+WE A VR +D G++K G S + V + + +F A + SH + E
Sbjct: 657 YYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAE 716
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L L +MK+ GY+PD +F L DVEE+EK + HSE++A+ FG+I+ PP PIR
Sbjct: 717 IYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIR 776
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCH+A K+IS I RE+IVRD+NRFH F DG CSC DYW
Sbjct: 777 IFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 236/459 (51%), Gaps = 20/459 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFP + KA +L G+++H LK G HDV+V S +YS+ G + A
Sbjct: 146 VRPDFYTFPPVLKACLSL---ADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAH 202
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F +MP R++ +WNA IS G A+ ++ + D +T + L C+ +
Sbjct: 203 KVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSN 262
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ G +H ++++ G + +V V N L++ Y K + A+ VFDG+ ++ VSW S++
Sbjct: 263 DVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIA 322
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVE 244
Y QN + F G+ P + S+ S +++ +GR+VH V+ +E
Sbjct: 323 AYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLE 382
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I +G+ALV+MY K GSI A F ++P R+++ WN +I GYA G A A+ ++ M
Sbjct: 383 VDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMM 442
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
R VPN T V +L A S GA+++GMKI + +K + C++D+ G+
Sbjct: 443 EEGRT-IVPNQGTWVSILPAYSHVGALQQGMKI-HGRLIKNCLFLDVFVATCLIDMYGKC 500
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND--SGNHVL 422
G ++ A + E+P ++ W A++++ ++G E A LFK D +H+
Sbjct: 501 GRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGHGE----KALQLFKDMRADGVKADHIT 555
Query: 423 LSNMFAA---TGRWEEA----DLVRKEMKDVGIKKGAGC 454
++ +A +G +EA D ++KE + K GC
Sbjct: 556 FVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGC 594
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 187/387 (48%), Gaps = 24/387 (6%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F +F++ + +++ KQLHAL L G+ DV + +Y+ G + F +
Sbjct: 54 FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGR 131
+N+ +WN+ +S V GR ++++D L G PD TF L AC L G
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGE 167
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++++ GF+ +V V L+ Y + V +A VF + ++ SW +M+ + QN
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
++ + E V+ +SS+L CA+ + G VH +K +E ++FV +
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--TSMRC 309
AL++MY K G +QDA+ F+ M R+LV WN+II Y AL F+EM MR
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMR- 346
Query: 310 EAVPNYVTLVCVLS-----ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
P+ +T+V + S + R G G + L+ I G +V++ +
Sbjct: 347 ---PDLLTVVSLASIFGQLSDRRIGRAVHGF-VVRCRWLEVDIVIG----NALVNMYAKL 398
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLN 391
G +D A + +++P R IS W L+
Sbjct: 399 GSIDCARAVFEQLPSRDVIS-WNTLIT 424
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/558 (39%), Positives = 326/558 (58%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLHA + G + + ++Y +A +FD + +RNL WN I
Sbjct: 20 GKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAW 79
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + AI + +R G PD TF L ACS S ++ G+++H ++RSG + +V V
Sbjct: 80 NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y KC V A+ VFD I +++ V W SML Y QN + + + G+
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGL 199
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P + ++A A L G+ +H + + E N V +AL+DMY K GS+ A
Sbjct: 200 KPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARS 259
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F + E+ +V WNA+I GYA GHA+ AL F+EM + + +P+++T V VL+ACS
Sbjct: 260 LFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM---KGKVLPDHITFVGVLAACSHG 316
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + +G F SM + I P +HY C++DLLG G ++ AY++I EM + P VWGA
Sbjct: 317 GLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGA 376
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL++C+++G E+G +A + L +L+P+D GN+V+LSNM+A G+W+ +R M + G+
Sbjct: 377 LLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGL 436
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSWI V N++H F ++DTSH ++ I A L + + MK AGY P +DVE+
Sbjct: 437 KKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVED 496
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+EK+ V HSE++A+AFGLI+ G + I KNLRIC DCH A KFIS I RE+ +RD
Sbjct: 497 DEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRD 556
Query: 569 NNRFHRFWDGYCSCSDYW 586
NR+H F DG CSC D+W
Sbjct: 557 VNRYHHFKDGVCSCGDFW 574
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 3/349 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ FTFP + KA SAL GK++H ++SG DVFVG + DMY+K G
Sbjct: 93 MRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGC 152
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD++ ER++ WN+ ++ G+P ++ + G +P TF + A
Sbjct: 153 VESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAA 212
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D LL G++LHG+ R GF+ N V L+D Y K V +A+ +F+ + +K VSW
Sbjct: 213 SADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSW 272
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR-SVHAVAV 239
+M+ Y + +F + + V P VL+AC+ L G+ ++
Sbjct: 273 NAMITGYAMHGHANEALDLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEGKMHFRSMIS 331
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ + + ++D+ G CG +++A +M E + W A++ G+ +M
Sbjct: 332 DFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGE 391
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+ E++ + + NYV L + + + V + + + LK I
Sbjct: 392 LALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSI 440
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 147/284 (51%), Gaps = 4/284 (1%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ + L +C ++ G+QLH + + G N + LV+ Y CN + A ++FD I
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+N W M+ Y N E ++ R G+ P F VL AC+ ++ +E G+
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H +++ +E ++FVG+AL+DMY KCG ++ A F+K+ ER++VCWN+++ Y+ G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D +L+ M + P T V ++A + G + +G K + + ++G + +
Sbjct: 184 PDESLALCRVMAFNGLK--PTEGTFVISIAASADNGLLPQG-KELHGYSWRHGFESNDKV 240
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ ++G V+ A + + + + +S W A++ ++G
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVS-WNAMITGYAMHG 283
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/590 (37%), Positives = 351/590 (59%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR P+ + AS+ + G Q+HA A+K+G D+ VG S DMY+K
Sbjct: 410 MRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 469
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D +FD+MP++++ +W I+ G A++ F ++ G + D++ + L A
Sbjct: 470 MKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 529
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ +++H +++R G ++ + NG+VD YG+C V A +F+ I K+ VSW
Sbjct: 530 CSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 588
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YV N ++F + GVEP + S+LSA A ++ L+ G+ +H ++
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 648
Query: 241 A--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+EG++ S LVDMY +CG+++ + FN + ++LV W ++I Y G A+
Sbjct: 649 KGFVLEGSL--ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 706
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M E++ P+++ V VL ACS +G + +G + SM +Y ++P EHY C+
Sbjct: 707 DLFRRMED---ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCL 763
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRA ++ AY+ +K M + PT VW ALL AC+++ ELG IAA L ++DP +
Sbjct: 764 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 823
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+VL+SN++AA RW++ + VR MK G+KK GCSWI V N++H F A+D SH ++
Sbjct: 824 GNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSY 883
Query: 478 EIQAMLTKLREEM-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI + L+++ E++ K GY+ T F L++ +EEEK+ + HSE++A+A+G++ P G
Sbjct: 884 EIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGAS 943
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RITKNLR+CGDCH+ K IS RE+++RD NRFH F G CSC D W
Sbjct: 944 LRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 208/403 (51%), Gaps = 19/403 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I + TFPC+ KA L G ++H LA+K G + VFV S MY+K
Sbjct: 207 MRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCND 266
Query: 61 KDDADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A ++FD MPE+ ++ +WN+ IS G+ A+ F +++ P+ TF A L
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQ 326
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC D S ++ G +H +++S + NV V N L+ Y + ++G A +F + D + +S
Sbjct: 327 ACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS 386
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SML +VQN Q + R G +P + S+++A AR G +HA A+
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAM 446
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++ ++ VG++LVDMY K S++ + F+KMP++++V W II G+A G AL
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 506
Query: 300 SFEEMTSMRCEAVPNYVTLV-CVLSACSRAGAVEKGMKIFYSM--TLKYGIKPGAEHYAC 356
F E ++ E + V ++ +L ACS G+K+ S+ Y I+ G
Sbjct: 507 LFRE---VQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLSDLVL 556
Query: 357 ---VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+VD+ G G VD A + + + + +S W +++ +C V+
Sbjct: 557 QNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI-SCYVH 597
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 184/364 (50%), Gaps = 6/364 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+Q+HA + S + + VF+ MY K G DA+K+FD MP + + TWNA I V
Sbjct: 133 GQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYV 192
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G P +++ + +R +G D TF L AC + G ++HG ++ G+ V
Sbjct: 193 TNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVF 252
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N +V Y KCN++ A+ +FD + +K D VSW SM+ Y N + ++F ++
Sbjct: 253 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 312
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ P + + L AC + ++ G +HA +K+ N+FV +AL+ MY + G + +A
Sbjct: 313 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 372
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M + + + WN+++ G+ G AL + EM P+ V ++ +++A +
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRD--AGQKPDLVAVISIIAASA 430
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
R+G GM+I ++ +K G+ + +VD+ + + I +MP + +S W
Sbjct: 431 RSGNTLNGMQI-HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVS-W 488
Query: 387 GALL 390
++
Sbjct: 489 TTII 492
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 40/338 (11%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + L C L G+Q+H ++ S +V + LV YGKC + A+ +FDG+
Sbjct: 117 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 176
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
K +W +M+ YV N E +++ R G+ +L AC + G
Sbjct: 177 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGA 236
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQ 291
VH +A+K +FV +++V MY KC + A F++MPE+ ++V WN++I Y+
Sbjct: 237 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + AL F EM + PN T V L AC + +++GM I ++ LK
Sbjct: 297 GQSIEALRLFGEMQ--KASLAPNTYTFVAALQACEDSSFIKQGMFI-HATVLKSSYYINV 353
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
++ + R G + A I M TIS W ++L+
Sbjct: 354 FVANALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSG------------------- 393
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
F G + EA EM+D G K
Sbjct: 394 ---------------FVQNGLYHEALQFYHEMRDAGQK 416
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
D SSVL C L G+ VHA + + + ++F+ + LV MYGKCG + DAE F
Sbjct: 114 DEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLF 173
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAG 329
+ MP + + WNA+IG Y G L S E MR +P + T C+L AC
Sbjct: 174 DGMPHKTIFTWNAMIGAYVTNGE---PLGSLELYREMRVSGIPLDACTFPCILKACGLLK 230
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
G ++ + + +K G +V + + ++ A ++ MP + + W ++
Sbjct: 231 DRRCGAEV-HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 289
Query: 390 LNACRVYGK 398
++A G+
Sbjct: 290 ISAYSSNGQ 298
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/509 (40%), Positives = 319/509 (62%), Gaps = 2/509 (0%)
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+WN+ I V G ++A+ F +R + D T + LN+ + ++Q +H +
Sbjct: 8 SWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
+++GF+ V N L+D Y K ++ A +VF ++DK+ VSW S++ Y N E
Sbjct: 68 IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
++F R GV P ++SVLSACA + ++ G+ +HA VK+ +E ++ V ++LV MY
Sbjct: 128 KLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMY 187
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KCGSI DA AF+ MP R+++ W A+I GYA G +L +++M + + P+Y+T
Sbjct: 188 AKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK--PDYIT 245
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ +L ACS G + G F +M YGIKPG EHYAC++DLLGR+G + A ++ +M
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM 305
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
+ P VW ALL ACRV+ + ELG +AA NLF+L+P +S +V+LSNM++A G+WE+A
Sbjct: 306 VVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAA 365
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
+R+ M+ GI K G SWI +++ F ++D +H EI + + ++ +K AGY+P
Sbjct: 366 RIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVP 425
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
D +FAL+D ++E K + +HSEK+A+AFGL+ +P G PIRI KNLR+CGDCH+A K+ S
Sbjct: 426 DMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTS 485
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ R +I+RD+N FH F +G CSC DYW
Sbjct: 486 KVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 163/339 (48%), Gaps = 5/339 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + +++T P + + +++ + +H L +K+G V + DMY+K G
Sbjct: 32 MRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGK 91
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +F +M ++++ +W + ++ G + AI F +R +G PD I + L+A
Sbjct: 92 LDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSA 151
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ +++ G+Q+H LV+SG + ++SV N LV Y KC + A FD + ++ +SW
Sbjct: 152 CAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISW 211
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V Y QN ++ Q + G +P +L AC+ L GR+ K
Sbjct: 212 TALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDK 271
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMAL 298
++ + ++D+ G+ G + +A+ N+M + V W A++ A + H ++ L
Sbjct: 272 VYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLA--ACRVHKELEL 329
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
E + N + V + + S AG E +I
Sbjct: 330 GEMAAKNLFELEPM-NSMPYVMLSNMYSAAGKWEDAARI 367
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 6/216 (2%)
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
++VSW S+++ V+ EE+ F R ++ ++ + SVL++ A + ++ SVH
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ +K E V +AL+DMY K G + A + F+KM ++++V W +++ GY+H G +
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ F MR V P+ + + VLSAC+ ++ G +I ++ +K G++
Sbjct: 125 EAIKLF---CKMRISGVYPDQIAVASVLSACAELTVMDFGQQI-HATLVKSGLESSLSVD 180
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+V + + G + A MP R IS W AL+
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVIS-WTALI 215
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 326/589 (55%), Gaps = 6/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I+P + A + G+ + L +G + V + MY K G
Sbjct: 52 MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGH 111
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F M R++ W+A ++ G P+ A+ F + G P+ +T + L+A
Sbjct: 112 CTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 171
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G +H + G V V LV+ YGKC + A F I++KN V+W
Sbjct: 172 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAW 231
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH--AVA 238
++ Y +N + ++ EG+ P SVL ACA IA L+ GR +H
Sbjct: 232 SAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQV 291
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ +E +++V +ALV+MY KCG++ A F+K+ +LV WN++I A G + AL
Sbjct: 292 LGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 351
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
FE M R E + P +T VL ACS AG +++G K F S +GI P AEH+ C+
Sbjct: 352 ELFERM---RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 408
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG + + +++ MP P W A L ACR Y + AA+NLF+LDP
Sbjct: 409 VDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKR 468
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VLLSNM+A GRW + +R+ M+ K AG SWI VK+R+H F + D H R
Sbjct: 469 APYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIG 528
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI A L +L + MK AGY+PDT L+DV++E K VG+HSEK+A+AF L+ P G PI
Sbjct: 529 EIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPI 588
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+A KFIS +V RE++VRD NRFHRF +G CSC DYW
Sbjct: 589 RVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 8/349 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLIT 113
YS+ G K FDEMP ++ +WNA I+ A +G R + F + G P +
Sbjct: 5 YSQIGNIPAVRKAFDEMPVADIVSWNALIA-AYIGNRDFDRCWLFFRGMLLQGINPGEVG 63
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
FL+AC+D + +GR + ++ +G + V LV YGK A VF +
Sbjct: 64 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ V+W +M+ Y +N +F +GV P + S L ACA + L G
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H ++ + VG+ALV++YGKCG I+ A AF ++ E+N+V W+AI YA
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARN-- 241
Query: 294 ADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGA 351
D + + M E VPN T V VL AC+ A+++G +I + L G++
Sbjct: 242 -DRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+V++ + G + A ++ ++ + +W +L+ +G+ E
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLV-LWNSLIATNAQHGQTE 348
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
++ Y + + + FD + + VSW +++ Y+ N + + F +G+ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ IS LSAC + +GRS+ + +E V +ALV MYGK G DA F
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGA 330
+M R++V W+A++ YA GH AL F +M + V PN VTLV L AC+ G
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMD---LDGVAPNKVTLVSGLDACASLGD 177
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G + + GI+ G +V+L G+ G ++ A E ++ + + W A+
Sbjct: 178 LRSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAWSAIS 235
Query: 391 NACRVYGKPELGRIAADNLFKLD 413
A Y + + R A L ++D
Sbjct: 236 AA---YARNDRNRDAIRVLHRMD 255
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 347/652 (53%), Gaps = 73/652 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD- 62
+ P+D++F L A +H QLH LKSG + V + +Y K +
Sbjct: 159 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEA 218
Query: 63 --DADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
DA K+ DEMP+++ TW + NA++ G ++
Sbjct: 219 SWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 278
Query: 95 AI--DAFINLRRTGGEP---DLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGF--DGN 145
+ DAF RR E D TF + L+AC++ G+ +HG ++R F +
Sbjct: 279 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 338
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFD---------------GIID---------------- 174
+ V N LV Y K ++ +AK +FD G ID
Sbjct: 339 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 398
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
KND+SW M+ YV E+ ++F R E V+P D+ + ++AC + L+ GR +
Sbjct: 399 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 458
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA V+ E + G+AL+ MY KCG++ DA + F MP + V WNA+I GH
Sbjct: 459 HAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHG 518
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F++M + + P+ ++ + +L+AC+ AG V++G F SM +GI PG +HY
Sbjct: 519 REALELFDQMVAEGID--PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 576
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
A ++DLLGR+G + A ++IK MP PT S+W A+L+ CR G E G AAD LF++ P
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 636
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
G ++LLSN ++A GRW +A VRK M+D G+KK GCSWI V ++IH+F DT H
Sbjct: 637 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 696
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
E+ L + M+ GY+PDT F L+D+E EK + HSEK+A+ FGL+ +PPG
Sbjct: 697 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 756
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ + KNLRICGDCH+A F+S VGRE++VRD RFH F DG CSC +YW
Sbjct: 757 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 173/415 (41%), Gaps = 74/415 (17%)
Query: 55 YSKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDL 111
++ G DA FD +P R+ NA +S A+ F L +G PD
Sbjct: 104 HAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDD 163
Query: 112 ITFCAFLNACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---AK 166
+F A ++A L QLH +++SG +SV N L+ Y KC+ A+
Sbjct: 164 YSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDAR 223
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQN---------YEEENG--------------------- 196
V D + DK+D++W +M+V YV+ +EE +G
Sbjct: 224 KVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCAD 283
Query: 197 -CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA----CVEGNIFVGS 251
++F E V +F +SVLSACA G+SVH ++ E + V +
Sbjct: 284 AFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNN 343
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------- 304
ALV +Y K G I A+ F+ M +++V WN I+ GY G D A+ F+ M
Sbjct: 344 ALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLS 403
Query: 305 ---------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
MR E V P T ++AC GA++ G ++ ++
Sbjct: 404 WMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL-HAHL 462
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ G + ++ + + G V+ A + MP ++S W A+++A +G
Sbjct: 463 VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS-WNAMISALGQHG 516
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P D+T+ A L G+QLHA ++ G G + MY+K G
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F MP + +WNA IS G + A++ F + G +PD I+F L A
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK 166
C+ L+ G + R G L+D G+ +G A+
Sbjct: 547 CNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEAR 593
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/656 (37%), Positives = 354/656 (53%), Gaps = 74/656 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGK--QLHALALKSGQIHDVFVGCSAFDMYSK- 57
M+ E P++FTF + A AL + Q HA ALKSG + V + +YSK
Sbjct: 139 MKHEGFKPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 58 ---TGLKDDADKMFDEMPERNLATW--------------------------------NAY 82
L A K+FDE+ E++ +W NA
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
IS V G + A++ + +G E D T+ + + AC+ LLQLG+Q+H +++R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE- 316
Query: 143 DGNVSVCNGLVDFYGKCNE-------------------------------VGLAKVVFDG 171
D + N LV Y KC + +G AK++F
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ +KN +SW M+ +N E G ++F +REG EP D+ S + +CA + G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ HA +K + ++ G+AL+ MY KCG +++A F MP + V WNA+I
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GH A+ +EEM ++ P+ +TL+ VL+ACS AG V++G K F SM Y I PGA
Sbjct: 497 GHGAEAVDVYEEM--LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HYA ++DLL R+G A +I+ +P +PT +W ALL+ CRV+G ELG IAAD LF
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L P G ++LLSNM AATG+WEE VRK M+D G+KK CSWI ++ ++H F DT
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDT 674
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE-EKMTEVGHHSEKIALAFGLIA 530
SH + L L +EM+ GY+PDT+F L+DVE + K + HSEKIA+AFGL+
Sbjct: 675 SHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK 734
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+PPG IRI KNLR CGDCH+ F+F+S +V R++I+RD RFH F +G CSC ++W
Sbjct: 735 LPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 87/419 (20%)
Query: 55 YSKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
Y +G A +F++ P R+ +NA I+ +AI+ F ++ G +PD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 113 TFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE----VGLAKV 167
TF + L + + + Q H ++SG SV N LV Y KC + A+
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 168 VFDGIIDKNDVSWCSMLVVYVQN----------------------------------YEE 193
VFD I++K++ SW +M+ YV+N Y+E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+M G+E +F SV+ ACA L+LG+ VHA ++ + + ++L
Sbjct: 270 --ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSL 326
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
V +Y KCG +A F KMP ++LV WNA++ GY GH A F+EM
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE------K 380
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP--------------------GAEH 353
N ++ + ++S + G E+G+K+F M + G +P G ++
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMK-REGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 354 YA---------------CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+A ++ + + G+V+ A ++ + MP ++S W AL+ A +G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHG 497
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 84/361 (23%)
Query: 109 PDLIT-----FCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
PDL+ + A L C + LQL R +HG ++ GF + N L+D Y K +E
Sbjct: 5 PDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE 64
Query: 162 VGLAKVVFD---------------------------GIIDK------NDVSWCSMLVVYV 188
+ A+ +FD G+ +K + V + +M+ +
Sbjct: 65 LNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFS 124
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNI 247
N + + +F + EG +P +F +SVL+ A +A E HA A+K+
Sbjct: 125 HNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 248 FVGSALVDMYGKCGS----IQDAEIAFNKMPERN-------------------------- 277
V +ALV +Y KC S + A F+++ E++
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 278 ------LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
LV +NA+I GY ++G AL M S E + T V+ AC+ AG +
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL--DEFTYPSVIRACATAGLL 302
Query: 332 EKGMKIFYSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G ++ ++ L+ + + H+ +V L + G D A I ++MP + +S W ALL
Sbjct: 303 QLGKQV-HAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALL 358
Query: 391 N 391
+
Sbjct: 359 S 359
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/626 (36%), Positives = 351/626 (56%), Gaps = 49/626 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++ T + ++L GKQLH A+ S I ++FVG DMY+K G+ D+A+ +
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR----------------------- 104
F M +++ +WNA ++ GR ++A+ F ++
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 105 ------------TGGEPDLITFCAFLNACSDCSLLQLGRQLHGF-------LVRSGFDGN 145
+G +P+ +T + L+ C+ L G+++H + L ++G
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
V N L+D Y KC +V A+ +FD + +++ V+W M+ Y Q+ + ++
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 204 RREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-NIFVGSALVDMYGKC 260
E + P F IS L ACA +A L +G+ +HA A++ +FV + L+DMY KC
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
GSI DA + F+ M +N V W +++ GY G+ + AL F+EM R + VTL+
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR--RIGFKLDGVTLLV 584
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL ACS +G +++GM+ F M +G+ PG EHYAC+VDLLGRAG ++ A +I+EMPM
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
P VW A L+ CR++GK ELG AA+ + +L N G++ LLSN++A GRW++ +R
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIR 704
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN 500
M+ G+KK GCSW+ F D +H EI +L + +K GY+P+T
Sbjct: 705 SLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETG 764
Query: 501 FALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
FAL+DV++EEK + HSEK+ALA+G++ P G IRITKNLR+CGDCH+AF ++S I+
Sbjct: 765 FALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRII 824
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
++I+RD++RFH F +G CSC YW
Sbjct: 825 DHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 212/457 (46%), Gaps = 52/457 (11%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+++TFP +FKA + G+ HAL+L +G I +VFVG + MYS+ DA K
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCS 125
+FDEM ++ +WN+ I + G+PK A++ F + G PD IT L C+
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LG+QLH F V S N+ V N LVD Y KC + A VF + K+ VSW +M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 186 VYVQNYEEENGCQMFLTARRE-----------------------------------GVEP 210
Y Q E+ ++F + E G++P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVE-------GNIFVGSALVDMYGKCGSI 263
+ + SVLS CA + L G+ +H A+K ++ V + L+DMY KC +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 264 QDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
A F+ + ER++V W +IGGY+ G A+ AL EM C+ PN T+ C
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 322 LSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
L AC+ A+ G +I Y++ + P C++D+ + G + A + M +
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNL----FKLD 413
++ W +L+ ++G E D + FKLD
Sbjct: 543 NEVT-WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 191/462 (41%), Gaps = 50/462 (10%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
S + T P + K + + + ++L + + + + + Y G A
Sbjct: 26 SAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLI-----STYISVGCLSHAVS 80
Query: 67 MFDEMPERNLAT--WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ P + WN+ I + G + F + PD TF AC +
Sbjct: 81 LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
S ++ G H + +GF NV V N LV Y +C + A+ VFD + + VSW S++
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 185 VVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
Y + + + +MF E G P + + +VL CA + LG+ +H AV + +
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N+FVG+ LVDMY KCG + +A F+ M +++V WNA++ GY+ G + A+ FE+
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 304 MTSMRC---------------------EAV------------PNYVTLVCVLSACSRAGA 330
M + EA+ PN VTL+ VLS C+ GA
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 331 VEKGMKIFYSMTLKYGIK-----PGAEHYAC--VVDLLGRAGLVDRAYEIIKEM-PMRPT 382
+ G +I + +KY I G E+ ++D+ + VD A + + P
Sbjct: 381 LMHGKEI-HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERD 439
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
+ W ++ +G +F+ D N +S
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 22/331 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALAL-------KSGQIHDVFVGCSAFDMYSKT 58
I PN+ T + +++ + GK++H A+ K+G + V DMY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 59 GLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITF 114
D A MFD + ER++ TW I G A++ + + P+ T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L AC+ + L++G+Q+H + +R+ + + V N L+D Y KC + A++VFD ++
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-- 231
KN+V+W S++ Y + E +F RR G + + VL AC+ ++ G
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 232 ---RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
R V E + LVD+ G+ G + A +MP E V W A +
Sbjct: 601 YFNRMKTVFGVSPGPEHY----ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
G ++ + E++T + +Y L
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLL 687
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/560 (39%), Positives = 335/560 (59%), Gaps = 10/560 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K + +++ + G I D VGC Y + G A+K+FDEMPER+L +WN+ IS
Sbjct: 56 KVVKSVSYRHGFIGDQLVGC-----YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 90 GRPKNAIDAF--INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G + + + G P+ +TF + ++AC + GR +HG +++ G V
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N +++YGK ++ + +F+ + KN VSW +M+V+++QN E G F +RR G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
EP +VL +C + + L + +H + + GN + +AL+D+Y K G ++D+
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+++ + + W A++ YA G A+ FE M P++VT +L+ACS
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS--PDHVTFTHLLNACSH 348
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+G VE+G F +M+ +Y I P +HY+C+VDLLGR+GL+ AY +IKEMPM P+ VWG
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL ACRVY +LG AA+ LF+L+P D N+V+LSN+++A+G W++A +R MK G
Sbjct: 409 ALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG 468
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA-GYIPDTNFALYDV 506
+ + +GCS+I N+IH F D SH + +IQ L ++R++MK+ GY T F L+DV
Sbjct: 469 LVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDV 528
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
E+ K + HSEKIA+AFGL+ + P PI I KNLRICGDCH K IS I R +I+
Sbjct: 529 GEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIII 588
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+ RFH F DG CSCSDYW
Sbjct: 589 RDSKRFHHFLDGSCSCSDYW 608
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 2/319 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+ TF + A G+ +H L +K G + +V V + + Y KTG + K+
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+++ +NL +WN I + G + + F RR G EPD TF A L +C D ++
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+L + +HG ++ GF GN + L+D Y K + + VF I + ++W +ML Y
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGN 246
+ + + F G+ P + +L+AC+ +E G+ ++ + ++
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ S +VD+ G+ G +QDA +MP E + W A++G + + E +
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF 431
Query: 306 SMRCEAVPNYVTLVCVLSA 324
+ NYV L + SA
Sbjct: 432 ELEPRDGRNYVMLSNIYSA 450
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 200 FLTARR-----EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
FL RR V D +SS+++A +EL R +H VK+ + F+G LV
Sbjct: 14 FLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV 73
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
Y + G AE F++MPER+LV WN++I GY+ +G+ M PN
Sbjct: 74 GCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPN 133
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
VT + ++SAC G+ E+G + + + +K+G+ + ++ G+ G + + ++
Sbjct: 134 EVTFLSMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF 192
Query: 375 KEMPMRPTISVWGALL 390
+++ ++ +S W ++
Sbjct: 193 EDLSIKNLVS-WNTMI 207
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ + A C ++L R LH +V+S + + + LV Y + A+ +FD + ++
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER 95
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+ VSW S++ Y ++ + G P + S++SAC E GR
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H + +K V + V +A ++ YGK G + + F + +NLV WN +I + G
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A+ L+ F S R P+ T + VL +C G V I + + + G
Sbjct: 216 AEKGLAYFN--MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI-HGLIMFGGFSGNKCI 272
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL-FKL 412
++DL + G ++ + + E+ P W A+L A +G GR A + +
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG---FGRDAIKHFELMV 328
Query: 413 DPNDSGNHVLLSNMFAA 429
S +HV +++ A
Sbjct: 329 HYGISPDHVTFTHLLNA 345
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RR P+ TF + ++ + + + +H L + G + + + D+YSK G
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRL 286
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+D+ +F E+ + W A ++ G ++AI F + G PD +TF LNAC
Sbjct: 287 EDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNAC 346
Query: 122 SDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGK 158
S L++ G+ R D + + +VD G+
Sbjct: 347 SHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/621 (37%), Positives = 343/621 (55%), Gaps = 37/621 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R I P++ F + KA A K++H A++ G + D F+G + Y K
Sbjct: 123 LRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC 182
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD++ +++ +W + S V G P+ + F + G +P+ +T + L A
Sbjct: 183 VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPA 242
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ L+ GR +HGF VR G NV VC+ LV Y +C V A++VFD + ++ VSW
Sbjct: 243 CSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSW 302
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVE------------------------------- 209
+L Y N E + G +F +GVE
Sbjct: 303 NGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQN 362
Query: 210 ----PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
P ISS L AC+ + L +G+ VH + + G++ +ALV MY KCG +
Sbjct: 363 LGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNL 422
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ + +++V WN +I A G+ L FE M ++ PN VT VLS C
Sbjct: 423 SRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESM--LQSGIKPNSVTFTGVLSGC 480
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S + VE+G++IF SM + ++P A HYAC+VD+ RAG + AYE I+ MPM PT S
Sbjct: 481 SHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASA 540
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL ACRVY EL +I+A+ LF+++PN+ GN+V L N+ W EA R MK+
Sbjct: 541 WGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKE 600
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
GI K GCSW+ V +R+H F D ++ + +I L +L E+MK+AGY PDT++ L D
Sbjct: 601 RGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQD 660
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+++EEK + HSEK+A+AFG++ + IR+ KNLRICGDCH+A K++S +VG +I
Sbjct: 661 IDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTII 720
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+ RFH F +G CSC D W
Sbjct: 721 VRDSLRFHHFRNGNCSCQDLW 741
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 157/341 (46%), Gaps = 5/341 (1%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDV--FVGCSAFDMYSKTGLKDDADKMF 68
F P F + + KQL + + ++ +G G A ++F
Sbjct: 30 FVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQLF 89
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D +P+ + T + IS G P AI + +LR G +P F AC
Sbjct: 90 DNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDAS 149
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
+++H +R G + + N L+ YGKC V A+ VFD ++ K+ VSW SM YV
Sbjct: 150 RVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYV 209
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
G +F GV+P +SS+L AC+ + L+ GR++H AV+ + N+F
Sbjct: 210 NCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVF 269
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V SALV +Y +C S++ A + F+ MP R++V WN ++ Y D L+ F +M+S
Sbjct: 270 VCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKG 329
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
EA + T V+ C G EK +++ M G KP
Sbjct: 330 VEA--DEATWNAVIGGCMENGQTEKAVEMLRKMQ-NLGFKP 367
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/564 (41%), Positives = 333/564 (59%), Gaps = 11/564 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVLG 89
QLH++A+ SG V V + Y K G DDA ++F M R+ +WN+ I
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
A+ F + R G D+ T + L A + L G Q HG L+++GF N V
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 150 NGLVDFYGKCNEVGLA--KVVFDGIIDKNDVSWCSMLVVYVQNYE-EENGCQMFLTARRE 206
+GL+D Y KC G++ + VF+ I + + V W +M+ Y QN E E+ + F +
Sbjct: 279 SGLIDLYSKCGG-GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSIQD 265
G P D V+SAC+ ++ G+ +H++A+K+ + N I V +AL+ MY KCG++QD
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F++M E N V N++I GYA G +L F+ M + + P +T + VLSAC
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWM--LERQIAPTSITFISVLSAC 455
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ G VE+G F M K+ I+P AEHY+C++DLLGRAG + A +I MP P
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL ACR +G EL AA+ + +L+P+++ +V+LSNM+A+ GRWEE VRK M+D
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK GCSWI VK RIH+F A+D+SH EI L ++ +MK AGY+PD +AL
Sbjct: 576 RGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVK 635
Query: 506 ---VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
EK +GHHSEK+A+AFGLI+ G P+ + KNLRICGDCH+A KFIS I GR
Sbjct: 636 DDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGR 695
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
E+ VRD +RFH F +G CSC DYW
Sbjct: 696 EITVRDAHRFHCFKEGQCSCGDYW 719
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 186/408 (45%), Gaps = 40/408 (9%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG--------LKDDA 64
F L K A TGK LH+L +KS + +YSK G +D +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 65 D-----------------------KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
D ++FD++PE +L ++N IS G A+ F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+R G + D T A + AC C + L QLH V SGFD VSV N L+ +YGK +
Sbjct: 131 MREMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 162 VGLAKVVFDGIID-KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ AK VF G+ +++VSW SM+V Y Q+ E +F R G+ F ++SVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLV 279
A + L G H +K N VGS L+D+Y KC G + D F ++ E +LV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 280 CWNAIIGGYAH-QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
WN ++ GY+ + + AL F +M + PN + VCV+SACS + +G +I
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYR--PNDCSFVCVISACSNLSSPSQGKQI- 365
Query: 339 YSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+S+ LK I ++ + + G + A + M T+S+
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSL 413
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 162/355 (45%), Gaps = 7/355 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT-G 59
M R ++ + FT + A + L G Q H +K+G + VG D+YSK G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFL 118
D K+F+E+ E +L WN +S ++A++ F ++ G P+ +F +
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ACS+ S G+Q+H ++S N +SV N L+ Y KC + A+ +FD + + N
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNT 410
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHA 236
VS SM+ Y Q+ E +F + P SVLSACA +E G + +
Sbjct: 411 VSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM 470
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ K +E S ++D+ G+ G + +AE +MP + W +++G G+ +
Sbjct: 471 MKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIE 530
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+A+ + ++ + YV L + ++ R V K +K KPG
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKK--KPG 583
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
D NV N ++ Y K + +A +FD I + + VS+ +++ Y E +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R G++ F +S+V++AC GL +G+ +H+VAV + + + V +AL+ YGK G
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 263 IQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+ DA+ F M R+ V WN++I Y AL F+EM +R + TL V
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEM--VRRGLNVDMFTLASV 246
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR--AGLVD--RAYEIIKEM 377
L+A + + G++ F+ +K G + + ++DL + G+ D + +E I E
Sbjct: 247 LTAFTCLEDLSGGLQ-FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE- 304
Query: 378 PMRPTISVWGALLN 391
P + +W +++
Sbjct: 305 ---PDLVLWNTMVS 315
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 335/559 (59%), Gaps = 4/559 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAF-DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K+LH +LK +H+ + +AF Y+K G A ++F + + + +WNA I
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P+ ++DA+ ++ +G PDL T C+ L+ACS L+LG+++HG ++R+ + + V
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV 531
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+ Y C E+ A V+FD + DK VSW +M+ Y+QN E +F GV
Sbjct: 532 YISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGV 591
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P + + SV AC+ + L LGR H A+K +E N F+ +++DMY K GS+ ++
Sbjct: 592 QPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFK 651
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN + ER++ WNA++ GY G A A+ FEEM R P+ +T + VL+AC+ +
Sbjct: 652 VFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEM--QRTGHCPDELTFLGVLTACNHS 709
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI-IKEMPMRPTISVWG 387
G V +G+ M +G+ P +HYACV+D+L RAG +D A +I +EM P + +W
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL++CR++ E+G A LF +P N+VLLSN++A +G+W+E VR+ MK++
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMS 829
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K AGCSWI + ++ F A ++S + EI+++ + L E+ GY PDT+ +D+
Sbjct: 830 LRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLS 889
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EEEK ++ HSEK+A+ +GLI G +R+ KNLRIC DCH+A K IS ++ RE++VR
Sbjct: 890 EEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVR 949
Query: 568 DNNRFHRFWDGYCSCSDYW 586
DN RFH F +G+CSC DYW
Sbjct: 950 DNKRFHHFKNGFCSCGDYW 968
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 192/392 (48%), Gaps = 14/392 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+++H L +S ++ + V C+ MYS G DD+ +FD + ++NL WNA IS+
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 88 LGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
N ++ F+ + +G PD TF + AC+ S +Q+G +HG +V++ +V
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N LV FYG V A VF + ++N VSW SM+ V+ N E C + L E
Sbjct: 220 FVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE-CFLLLGQMME 278
Query: 207 -----GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
P +++VL CAR + +G+ VH +A+K ++ + V +AL+DMY KCG
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
I DA++ F +N+V WN ++GG++ G +M + + + VT++
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNA 398
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAYEIIKEMPMR 380
+ C +V +K + +LK E A V + G + A+ + + +
Sbjct: 399 VPVCFEE-SVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSK 457
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKL 412
T++ W AL+ Y + R++ D F++
Sbjct: 458 -TVNSWNALIGG---YSQSSDPRLSLDAYFQM 485
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 186/400 (46%), Gaps = 11/400 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FTFPC+ KA + + G +H L +K+ + DVFV + Y G DA ++
Sbjct: 182 PDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRV 241
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----PDLITFCAFLNACSD 123
F MPERNL +WN+ I G + + E PD+ T L C+
Sbjct: 242 FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCAR 301
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ +G+ +HG ++ D V V N L+D Y KC + A+V+F +KN VSW +M
Sbjct: 302 DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTM 361
Query: 184 LVVYVQNYEEENGCQMFLTARREG--VEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+ + + + G + + I + + C + L + +H ++K
Sbjct: 362 VGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ 421
Query: 242 -CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V N V +A V Y KCGS+ A F + + + WNA+IGGY+ ++L +
Sbjct: 422 EFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDA 481
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ +M S +P+ T+ +LSACS+ +++ G ++ + + ++ ++ + Y ++ L
Sbjct: 482 YFQMKS--SGLLPDLFTVCSLLSACSQIKSLKLGKEV-HGLIIRNRLERDSFVYISLLSL 538
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G + A+ + M + +S W ++N G PE
Sbjct: 539 YIHCGELSTAHVLFDAMEDKTLVS-WNTMVNGYLQNGFPE 577
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 5/348 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ FT L A S + GK++H L +++ D FV S +Y G
Sbjct: 485 MKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGE 544
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M ++ L +WN ++ + G P+ A+ F + G +P I+ + A
Sbjct: 545 LSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGA 604
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+LGR+ HG+ ++ + N + ++D Y K V + VF+G+ +++ SW
Sbjct: 605 CSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASW 664
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M++ Y + + ++F +R G P + VL+AC +GL + +K
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH-SGLVHEGLTYLDQMK 723
Query: 241 ACVEGNIFVG--SALVDMYGKCGSIQDA-EIAFNKMPERNLV-CWNAIIGGYAHQGHADM 296
N + + ++DM + G + +A +IA +M E V WN ++ + +M
Sbjct: 724 TLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEM 783
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ E NYV L + + + V K + M+L+
Sbjct: 784 GEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLR 831
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 325/580 (56%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN++TF KAS L K +H LK+ D VG +Y++ G DA K+
Sbjct: 245 PNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+EMP+ ++ W+ I+ G A+D FI +R P+ T + LN C+
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCS 364
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG QLHG +V+ GFD +V V N L+D Y KC ++ A +F + KN VSW +++V Y
Sbjct: 365 GLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY 424
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
E MF A R V + SS L ACA +A +ELG VH +A+K +
Sbjct: 425 ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRV 484
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++L+DMY KCG I+ A+ FN+M ++ WNA+I GY+ G AL F+ M
Sbjct: 485 AVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGS 544
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
C+ PN +T + VLS CS AG +++G F SM +GI+P EHY C+V L GR+G +
Sbjct: 545 DCK--PNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQL 602
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D+A +I+ +P P++ +W A+L+A E R +A+ + K++P D +VLLSNM+
Sbjct: 603 DKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMY 662
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A +W +RK MK+ G+KK G SWI + +H F + H I ML L
Sbjct: 663 AGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLN 722
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP-IRITKNLRIC 546
+ AGY+PD N L D+++EEK + HSE++ALA+GL+ +P I I KNLRIC
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSA K IS IV R++++RD NRFH F G CSC D+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 172/390 (44%), Gaps = 23/390 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R CI ND V+ K +H LK G D+F + Y K G
Sbjct: 55 MLRRCIRKND---------------SVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FDEMPERN N G ++ + + L R G E + F +FL
Sbjct: 100 DKDALNLFDEMPERN----NVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKL 155
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ LH +V+ G+D N V L++ Y C V A+ VF+GI+ K+ V W
Sbjct: 156 FVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVW 215
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ YV+N E+ Q+ +G P ++ + L A + +SVH +K
Sbjct: 216 AGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILK 275
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
C E + VG L+ +Y + G + DA FN+MP+ ++V W+ +I + G + A+
Sbjct: 276 TCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDI 335
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M VPN TL +L+ C+ G ++ + + +K G ++D+
Sbjct: 336 FIRMR--EGFVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDVYVSNALIDV 392
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ +D A ++ E+ + +S W ++
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNVVS-WNTVI 421
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 185/405 (45%), Gaps = 7/405 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE N F K +L LH+ +K G + FVG + + YS G
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +F+ + +++ W +S V G ++++ + G P+ TF L A
Sbjct: 197 VDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA 256
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +HG ++++ ++ + V GL+ Y + ++ A VF+ + + V W
Sbjct: 257 SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ + QN +F+ R V P +F +SS+L+ CA LG +H + VK
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +++V +AL+D+Y KC + A F ++ +N+V WN +I GY + G AL+
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNM 436
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F E ++R + VT L AC+ ++E G+++ + + +K ++D+
Sbjct: 437 FRE--ALRNQVSVTEVTFSSALGACASLASMELGVQV-HGLAIKTNNAKRVAVSNSLIDM 493
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ G + A + EM ++ W AL++ +G LGR A
Sbjct: 494 YAKCGDIKVAQTVFNEMET-IDVASWNALISGYSTHG---LGRQA 534
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 158/345 (45%), Gaps = 13/345 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + PN+FT + + G+QLH L +K G DV+V + D+Y+K
Sbjct: 339 MREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEK 398
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+F E+ +N+ +WN I G A++ F R +TF + L A
Sbjct: 399 MDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGA 458
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++LG Q+HG +++ V+V N L+D Y KC ++ +A+ VF+ + + SW
Sbjct: 459 CASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASW 518
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV--- 237
+++ Y + ++F + +P VLS C+ ++ G+
Sbjct: 519 NALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMIC 578
Query: 238 --AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
++ C+E + +V ++G+ G + A +P E +++ W A++ +Q +
Sbjct: 579 DHGIEPCLEHY----TCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNE 634
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ A S EE+ + + YV L + + + ++ K MK
Sbjct: 635 EFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMK 679
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/594 (38%), Positives = 334/594 (56%), Gaps = 35/594 (5%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P+ K++HA +KSG + + D Y K L DA +FDEMP+R+ +W + ++
Sbjct: 18 PLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTA 77
Query: 86 AVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P + F + T +PD + L AC+ L+LG+Q+H V S F
Sbjct: 78 YNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVD 137
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE---------- 194
+ V + LVD Y KC +A+ VFD I+ K VSW +ML Y ++ ++
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197
Query: 195 ---------------------NGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGR 232
+GC MF+ RREGV+ D ++SSV+ ACA +A L LG+
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H + + + E +F+ +ALVDMY KC I A FN+M R++V W +II G A G
Sbjct: 258 QIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHG 317
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A AL +++M + E PN VT V ++ ACS AG V KG K+F +M Y I P +
Sbjct: 318 RAKEALDLYDQM--VLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQ 375
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ C +DLL R+G ++ A ++IK MP +P W ALL+AC+ +G E+G AD L L
Sbjct: 376 LFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSL 435
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+ ++ +VLLSN++A G+WE+ VRK M D+ +K+ G S I + +F A +T
Sbjct: 436 NMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETC 495
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H EI +L +L EM+ GYIPDT++ L+D+EE+EK E+ HSE+ A+A+GL+
Sbjct: 496 HPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAV 555
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG IRI KNLRICGDCH+ K S IV +E+IVRD R+H F DG CSC+D+W
Sbjct: 556 PGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 36/379 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-------- 57
+ P+ F + L KA ++L GKQ+HA + S + D V S DMY+K
Sbjct: 100 LQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIAR 159
Query: 58 -----------------------TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
+GLKD+A ++F P RNL +W A IS V G +
Sbjct: 160 SVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCID 219
Query: 95 AIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
FI +RR G + D + + + AC++ ++L LG+Q+HG ++ SG++ + + N LV
Sbjct: 220 GCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALV 279
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
D Y KC+++ A+ VF+ ++ ++ VSW S++V Q+ + ++ ++P +
Sbjct: 280 DMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEV 339
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
++ AC+ + GR + ++ + ++ + + +D+ + G + +AE
Sbjct: 340 TFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKT 399
Query: 273 MPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
MP + + W A++ H G+ +M + + + S+ YV L V + + +
Sbjct: 400 MPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQM 459
Query: 332 EKGMKIFYSMTLKYGIKPG 350
+ K+ M +K KPG
Sbjct: 460 SRVRKLMTDMEVKR--KPG 476
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L C + + +HA VK+ + + + L+D YGKC +QDA F++MP+R+
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEM-TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
V W +I+ Y + LS F M T+ R + P++ +L AC+ ++ G ++
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQ--PDHFVYATLLKACASLCSLRLGKQV 126
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
L + + +VD+ + GL A + + ++ ++S W A+L+
Sbjct: 127 HARFVLSPFVDDDVVK-SSLVDMYAKCGLPSIARSVFDSILVKTSVS-WTAMLS 178
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 333/589 (56%), Gaps = 5/589 (0%)
Query: 1 MRRECISPN--DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+R C+ PN T P K++S L P+ G+QLHA +LK + V S +Y+K
Sbjct: 514 LRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAK 573
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL A ++FDEMP + W A I+ + G + A+ N G PD T
Sbjct: 574 CGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 633
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ + L G + + G +V V VD Y KC E+ A+ VFD + K+
Sbjct: 634 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 693
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y N +FL + EG++P + ++ LSAC R+ L+LGR +
Sbjct: 694 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 753
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N +G+AL+DMY KCGS +A + F +M +++++ WNA+I G GH +A
Sbjct: 754 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 813
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +M + N T + +L +C+ G ++ G + F++MT Y I P EHY C+
Sbjct: 814 FALVGQMEKSGVKLNDN--TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCM 871
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A++++ +MPM + GALL C+++ EL L L+P +S
Sbjct: 872 VDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNS 931
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+V+LSN+++ GRWE+A +R +MK G++K CSW+ + ++H F+ D SH +
Sbjct: 932 GNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 991
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L EMK GY P T ++DVE+EEK + HHSEK+A+AF L+ PG I
Sbjct: 992 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETI 1051
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+TKNLR+C DCH+A K +S I RE+IVRDNNRFH F DG CSC+DYW
Sbjct: 1052 RVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/653 (37%), Positives = 359/653 (54%), Gaps = 70/653 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--- 57
M +E I P FT + + +A TGK++H+ +K G +V V S +MY+K
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 58 ----------------------------TGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
G D A F++M ER++ TWN+ IS
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 90 GRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+D F LR + PD T + L+AC++ L +G+Q+H +V +GFD + V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 149 CNGLVDFYGKC---------------------------------NEVGLAKVVFDGIIDK 175
N L+ Y +C ++ AK +F + D+
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V Y Q+ +F + G P + ++++LS + +A L G+ +H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
AVK+ ++ V +AL+ MY K G+I A AF+ + ER+ V W ++I A GHA
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 295 DMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ AL FE +M E + P+++T V V SAC+ AG V +G + F M I P H
Sbjct: 497 EEALELFE---TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC+VDL GRAGL+ A E I++MP+ P + WG+LL+ACRV+ +LG++AA+ L L+
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE 613
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P +SG + L+N+++A G+WEEA +RK MKD +KK G SWI VK+++H+F +D +H
Sbjct: 614 PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
EI + K+ +E+K GY+PDT L+D+EEE K + HHSEK+A+AFGLI+ P
Sbjct: 674 PEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPD 733
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCH+A KFIS +VGRE+IVRD RFH F DG+CSC DYW
Sbjct: 734 KTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 201/472 (42%), Gaps = 105/472 (22%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS--- 84
T + +H +KSG + V++ + ++YSKTG A K+FDEMP R +WN +S
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 85 ------------------------NAVLG----GRPKNAIDAFINLRRTGGEPDLITFCA 116
++G G+ AI ++ + G EP T
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L + + ++ G+++H F+V+ G GNVSV N L++ Y KC + +AK VFD ++ ++
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 177 DVSWCSMLVVYVQ---------NYEEE----------------------NGCQMFLTARR 205
SW +M+ +++Q +E+ +F R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 206 EG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ + P F ++SVLSACA + L +G+ +H+ V + + V +AL+ MY +CG ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 265 ---------------------------------DAEIAFNKMPERNLVCWNAIIGGYAHQ 291
A+ F + +R++V W A+I GY
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A++ F M PN TL +LS S ++ G +I S +K G
Sbjct: 392 GSYGEAINLFRSMVG--GGQRPNSYTLAAMLSVASSLASLSHGKQIHGS-AVKSGEIYSV 448
Query: 352 EHYACVVDLLGRAGLV---DRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + +AG + RA+++I+ R T+S W +++ A +G E
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIR--CERDTVS-WTSMIIALAQHGHAE 497
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 210 PKDFMISSVLSACARIAGLELGRS--------VHAVAVKACVEGNIFVGSALVDMYGKCG 261
P +S++L C + + +S VH +K+ + ++++ + L+++Y K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
A F++MP R WN ++ Y+ +G D F+++ + V+ +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ------RDSVSWTTM 117
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD---RAYEIIKEMP 378
+ G K +++ M +K GI+P V+ + ++ + + I ++
Sbjct: 118 IVGYKNIGQYHKAIRVMGDM-VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+R +SV +LLN G P + + D + D
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/587 (38%), Positives = 331/587 (56%), Gaps = 38/587 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE P ++T + AS+ L GKQ+H + + +VF+ + DMY+K G
Sbjct: 146 MQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD + ++NL +WN IS G+P+ I +R +G PD +T + A
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
Y +C V A+ VF +K+ V W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y +N EE+ +F E +EP + +SSV+S+CA++A L G++VH ++
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + N+ V SAL+DMY KCG I DA FN MP RN+V WNA+I G A GH AL
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + + P+ VT + +LSAC +E+G + F S++ ++G+ P +HYAC+V+L
Sbjct: 411 FENMLQQKFK--PDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNL 468
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G +++A +IK M P +W LL+ C G +AA +LF+LDP + +
Sbjct: 469 LGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPY 528
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
++LSNM+A+ GRW++ VR MK +KK AG SWI + N +H F ++D +H + +I
Sbjct: 529 IMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIY 588
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV-PIRI 539
L L +++ G+ P+TN L+DV E+EK + HSEK+ALAFGLI P G+ PIRI
Sbjct: 589 EKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRI 648
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+RIC DCH KF S I+GR++I+RD+NRFH F G CSC+D W
Sbjct: 649 IKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 163/354 (46%), Gaps = 39/354 (11%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D F + Y+K+G + FD MP R+ ++N I+ P+ +++ F ++
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R G EP T + LNA + L+ G+Q+HG ++ F GNV + N L D Y KC E+
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ +FD + KN VSW M+ Y +N + E + R G P +S++++A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
Y +CG + +A F++ E+++VCW A
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
++ GYA G + AL F EM E P+ TL V+S+C++ ++ G + + ++
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIE--PDSYTLSSVVSSCAKLASLHHGQAV-HGKSI 349
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G+ + ++D+ + G +D A + MP R +S W A++ C G
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS-WNAMIVGCAQNG 402
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+ + L+ +Y K G ++DA+ F+KM +R+ WNA++ YA G ++F+ M
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRM--- 115
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ V+ ++ S ++ +++F M + G +P Y V L A L+
Sbjct: 116 ---PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ-REGFEP--TEYTIVSILNASAQLL 169
Query: 368 DRAY--EIIKEMPMRP---TISVWGALLNACRVYGKPELGRIAADNLFK 411
D Y +I + +R + +W AL + G+ E R D L K
Sbjct: 170 DLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK 218
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/564 (41%), Positives = 333/564 (59%), Gaps = 11/564 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVLG 89
QLH++A+ SG V V + Y K G DDA ++F M R+ +WN+ I
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
A+ F + R G D+ T + L A + L G Q HG L+++GF N V
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 150 NGLVDFYGKCNEVGLA--KVVFDGIIDKNDVSWCSMLVVYVQNYE-EENGCQMFLTARRE 206
+GL+D Y KC G++ + VF+ I + + V W +M+ Y QN E E+ + F +
Sbjct: 279 SGLIDLYSKCGG-GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSIQD 265
G P D V+SAC+ ++ G+ +H++A+K+ + N I V +AL+ MY KCG++QD
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F++M E N V N++I GYA G +L F+ M + + P +T + VLSAC
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWM--LERQIAPTSITFISVLSAC 455
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ G VE+G F M K+ I+P AEHY+C++DLLGRAG + A +I MP P
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL ACR +G EL AA+ + +L+P+++ +V+LSNM+A+ GRWEE VRK M+D
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK GCSWI VK RIH+F A+D+SH EI L ++ +MK AGY+PD +AL
Sbjct: 576 RGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVK 635
Query: 506 ---VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
EK +GHHSEK+A+AFGLI+ G P+ + KNLRICGDCH+A KFIS I GR
Sbjct: 636 DDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGR 695
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
E+ VRD +RFH F +G CSC DYW
Sbjct: 696 EITVRDAHRFHCFKEGQCSCGDYW 719
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 186/408 (45%), Gaps = 40/408 (9%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG--------LKDDA 64
F L K A TGK LH+L +KS + +YSK G +D +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 65 D-----------------------KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
D ++FD++PE +L ++N IS G A+ F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+R G + D T A + AC C + L QLH V SGFD VSV N L+ +YGK +
Sbjct: 131 MREMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 162 VGLAKVVFDGIID-KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ AK VF G+ +++VSW SM+V Y Q+ E +F R G+ F ++SVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLV 279
A + L G H +K N VGS L+D+Y KC G + D F ++ E +LV
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 280 CWNAIIGGYAH-QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
WN ++ GY+ + + AL F +M + PN + VCV+SACS + +G +I
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYR--PNDCSFVCVISACSNLSSPSQGKQI- 365
Query: 339 YSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+S+ LK I ++ + + G + A + M T+S+
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSL 413
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 162/355 (45%), Gaps = 7/355 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT-G 59
M R ++ + FT + A + L G Q H +K+G + VG D+YSK G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFL 118
D K+F+E+ E +L WN +S ++A++ F ++ G P+ +F +
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ACS+ S G+Q+H ++S N +SV N L+ Y KC + A+ +FD + + N
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNT 410
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHA 236
VS SM+ Y Q+ E +F + P SVLSACA +E G + +
Sbjct: 411 VSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM 470
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ K +E S ++D+ G+ G + +AE +MP + W +++G G+ +
Sbjct: 471 MKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIE 530
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+A+ + ++ + YV L + ++ R V K +K KPG
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKK--KPG 583
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 14/254 (5%)
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
D NV N ++ Y K + +A +FD I + + VS+ +++ Y E +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R G++ F +S+V++AC GL +G+ +H+VAV + + + V +AL+ YGK G
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 263 IQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+ DA+ F M R+ V WN++I Y AL F+EM +R + TL V
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEM--VRRGLNVDMFTLASV 246
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR--AGLVD--RAYEIIKEM 377
L+A + + G++ F+ +K G + + ++DL + G+ D + +E I E
Sbjct: 247 LTAFTCLEDLSGGLQ-FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE- 304
Query: 378 PMRPTISVWGALLN 391
P + +W +++
Sbjct: 305 ---PDLVLWNTMVS 315
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L C L G+S+H++ +K+ + + + + + +Y KCG + A AF + + N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ +NAII YA + +A F+++ P+ V+ ++SA + G + +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE------PDLVSYNTLISAYADCGETAPALGL 127
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
F M G A + GL+ + + + +SV ALL YG
Sbjct: 128 FSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLT---YYG 184
Query: 398 K 398
K
Sbjct: 185 K 185
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 333/589 (56%), Gaps = 5/589 (0%)
Query: 1 MRRECISPN--DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
+R C+ PN T P K++S L P+ G+QLHA +LK + V S +Y+K
Sbjct: 538 LRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAK 597
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL A ++FDEMP + W A I+ + G + A+ N G PD T
Sbjct: 598 CGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRV 657
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ + L G + + G +V V VD Y KC E+ A+ VFD + K+
Sbjct: 658 LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDA 717
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +M+ Y N +FL + EG++P + ++ LSAC R+ L+LGR +
Sbjct: 718 VAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRM 777
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N +G+AL+DMY KCGS +A + F +M +++++ WNA+I G GH +A
Sbjct: 778 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIA 837
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +M + N T + +L +C+ G ++ G + F++MT Y I P EHY C+
Sbjct: 838 FALVGQMEKSGVKLNDN--TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCM 895
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A++++ +MPM + GALL C+++ EL L L+P +S
Sbjct: 896 VDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNS 955
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
GN+V+LSN+++ GRWE+A +R +MK G++K CSW+ + ++H F+ D SH +
Sbjct: 956 GNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSD 1015
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L EMK GY P T ++DVE+EEK + HHSEK+A+AF L+ PG I
Sbjct: 1016 QIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETI 1075
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+TKNLR+C DCH+A K +S I RE+IVRDNNRFH F DG CSC+DYW
Sbjct: 1076 RVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 339/586 (57%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ ++P+ FT PC+ KA S + + GK++H + G DVFV +Y+K G
Sbjct: 160 MQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGR 219
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + +RN+ +W + IS G P A+ F +R+ +PD I + L A
Sbjct: 220 VEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRA 279
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L+ G+ +HG +V+ G + + L Y KC +V +A+ FD + N + W
Sbjct: 280 YTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMW 339
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y +N +F + + + S + ACA++ L+L + + K
Sbjct: 340 NAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINK 399
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++FV +AL+DM+ KCGS+ A F++ ++++V W+A+I GY G A+
Sbjct: 400 TEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDL 459
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + PN VT V +L+AC+ +G VE+G ++F+SM YGI+ +HYACVVDL
Sbjct: 460 FYAMK--QAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDL 516
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G ++ AY+ I MP+ P +SVWGALL AC++Y LG AA+ LF LDP ++G++
Sbjct: 517 LGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHY 576
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++A++ W+ VR M++ G+ K G S I + ++ F+ D SH R EI
Sbjct: 577 VQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIF 636
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L +K AG+IP L+D+ +EEK + +HSE++A+A+GLI+ PG +RIT
Sbjct: 637 EELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRIT 696
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C +CHSA K IS +V RE++VRD NRFH F +G CSC DYW
Sbjct: 697 KNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 196/391 (50%), Gaps = 12/391 (3%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA + SG + F+ + G A K+FDE PE ++ WNA I
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+AI+ + ++ +G PD T L ACS +L++G+++HG + R GF+ +V V N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
GLV Y KC V A++VF+G+ D+N VSW SM+ Y QN ++F R+ V+P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ SVL A + LE G+S+H VK +E + +L MY KCG + A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
++M N++ WNA+I GYA G+ + A+ F+EM S + +T+ + AC++ G+
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRT--DSITVRSAILACAQVGS 386
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ K K + ++D+ + G VD A E+ + + + VW A++
Sbjct: 387 LDLA-KWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVF-DRTLDKDVVVWSAMI 444
Query: 391 NACRVYGKPELGRIAADNLFKLD-----PND 416
++G+ G+ A D + + PND
Sbjct: 445 VGYGLHGR---GQDAIDLFYAMKQAGVCPND 472
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 333/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + + FTF + KA S + G+Q+HAL LKSG + FV + MY+ G
Sbjct: 112 MHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQ 171
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD MPER++ WN+ +S G + F + E D +T + L A
Sbjct: 172 IGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMA 231
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + L++G + ++V G N ++ L+D Y KC +V A+ +FD + ++ V+W
Sbjct: 232 CGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAW 291
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q + +F ++ V P + + SVL +CA + E G+ VH K
Sbjct: 292 SAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKK 351
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + +G+ L+D Y KCG I + F +M +N+ W A+I G A+ G MAL
Sbjct: 352 KKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEF 411
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + + PN VT + VLSACS A V++G +F SM + I+P EHY C+VD+
Sbjct: 412 FSSM--LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDI 469
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ AY+ I MP P VW LL +CR + E+ + +++ +L+P SG++
Sbjct: 470 LGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDY 529
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN +A GR E+A VR +K+ IKK GCS I + +H F ++D H+ + EI
Sbjct: 530 ILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIH 589
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L K+ +++K GY+P+T+ A + EEE K T V HHSEK+A+A+GLI P IRI+
Sbjct: 590 DALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRIS 649
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS + R +IVRD NRFH F DG CSC+DYW
Sbjct: 650 KNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 16/399 (4%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD---KMFDEMPERNLATWNAY 82
P +Q+HA LK+ ++ D + + + + L D D +F+ + + + +N
Sbjct: 34 PKDLQQVHAHLLKTRRLLDPIITEAVLE-SAALLLPDTIDYALSIFNHIDKPESSAYNVM 92
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
I P NA+ F + + D TF + L ACS L+ G Q+H +++SGF
Sbjct: 93 IRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGF 152
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
N V N L+ Y C ++G+A+ VFDG+ +++ V+W SML Y +N + ++F
Sbjct: 153 KSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRK 212
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+E D + SVL AC R+A LE+G + V + N + ++L+DMY KCG
Sbjct: 213 ILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQ 272
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F++M +R++V W+A+I GYA AL+ F EM + PN VT+V VL
Sbjct: 273 VDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEM--QKGNVYPNEVTMVSVL 330
Query: 323 SACSRAGAVEKGMKIFYSM---TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+C+ GA E G + + + +K + G + ++D + G +DR+ E+ KEM
Sbjct: 331 YSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ----LIDFYAKCGYIDRSVEVFKEMSF 386
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLD--PND 416
+ + W AL+ G+ ++ ++ + D PND
Sbjct: 387 K-NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPND 424
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/533 (38%), Positives = 328/533 (61%), Gaps = 3/533 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLIT 113
Y++ GL ++A K+FDEM E++ +W A ++ V +P+ A+ + ++R P++ T
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ A + ++ G+++HG +VR+G D + + + L+D YGKC + A+ +FD I+
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+K+ VSW SM+ Y ++ G +F P ++ + VL+ACA + ELG+
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + + F S+LVDMY KCG+I+ A+ + P+ +LV W ++IGG A G
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQ 400
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D AL F+ + ++ P++VT V VLSAC+ AG VEKG++ FYS+T K+ + ++H
Sbjct: 401 PDEALKYFDLL--LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y C+VDLL R+G ++ +I EMPM+P+ +W ++L C YG +L AA LFK++
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + +V ++N++AA G+WEE +RK M+++G+ K G SW +K + H+F A DTSH
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSH 578
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+I L +LR++MK GY+P T+ L+DVE+E+K + +HSEK+A+AF +++
Sbjct: 579 PMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEE 638
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G I++ KNLR C DCH A KFIS I R++ VRD+ RFH F +G CSC DYW
Sbjct: 639 GTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 5/334 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FT A++A+ GK++H +++G D + S DMY K G D+A +
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++ E+++ +W + I R + F L + P+ TF LNAC+D +
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE 335
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+LG+Q+HG++ R GFD + LVD Y KC + AK V DG + VSW S++
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGN 246
QN + + + F + G +P +VLSAC +E G +++ K +
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ LVD+ + G + + ++MP + + W +++GG + G+ D+A + +E+
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 306 SMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ E YVT+ + +A + G + K M+
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 38/362 (10%)
Query: 100 INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
+ L +P T+C + CS L+ G+++H + SGF + + N L+ Y KC
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 160 N----------------------------EVGL---AKVVFDGIIDKNDVSWCSMLVVYV 188
EVGL A+ +FD + +K+ SW +M+ YV
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 189 QNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + E ++ L R P F +S ++A A + + G+ +H V+A ++ +
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ S+L+DMYGKCG I +A F+K+ E+++V W ++I Y S F E+
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG- 312
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
CE PN T VL+AC+ E G ++ MT + G P + + +VD+ + G +
Sbjct: 313 SCER-PNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNI 370
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A ++ P +P + W +L+ C G+P+ D L K +HV N+
Sbjct: 371 ESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK--SGTKPDHVTFVNVL 427
Query: 428 AA 429
+A
Sbjct: 428 SA 429
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C PN++TF + A + L GKQ+H + G F S DMY+K G + A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ D P+ +L +W + I G+P A+ F L ++G +PD +TF L+AC+
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 125 SLLQLGRQL 133
L++ G +
Sbjct: 434 GLVEKGLEF 442
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/560 (42%), Positives = 328/560 (58%), Gaps = 10/560 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYISNAVL 88
KQLH +K+G + + YSK D+A K+F N+ TW A I V
Sbjct: 326 KQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQ 385
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ A+D F + R G P+ T+ L A SLL QLH ++++ ++ SV
Sbjct: 386 NNNNEKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLS---QLHAQIIKAYYEKVPSV 441
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y K V + VF I K+ V+W +ML Q + E ++F+ +EGV
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 209 EPKDFMISSVLSACARIAG-LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P ++ SSV++AC+ A +E G+ +HA AVK+ + V SAL+ MY K G+I+ AE
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACS 326
F + ER++V WN++I GY G A AL F+ M+ + +P + VT + VL+AC+
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ---IMQNQGLPLDDVTFIGVLTACT 618
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VE+G K F M Y I EHY+C+VDL RAG+ D+A +II MP + ++W
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIW 678
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL ACRV+ ELG++AA+ L L PND+ +VLLSN+ A G WEE VRK M +
Sbjct: 679 RTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+KK AGCSWI +KNRI F A D SH + + A L +L ++K GY PDTN+ +DV
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EEE K + HSE++A+A+GLIA+PPG PI+I KNLRICGDCH+ + IS I R +IV
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+NRFH F G CSC YW
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
T C K L V G+Q+H +LKSG + DV VG S DMY KT +D +FDE
Sbjct: 105 LTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDE 164
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M +N+ +W + +S G I ++ G P+ TF L A +D S+++ G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H +V++GF+ VCN L+ Y K VG A+ VFD ++ ++ V+W M+ Y
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
G QMF R GV+ + + L C++ L + +H VK E +
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 251 SALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+AL+ Y KC S+ +A F+ N+V W A+IGG+ + + A+ F +M+ R
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMS--RE 402
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN+ T VL AG + ++ +K + ++D + G V
Sbjct: 403 GVRPNHFTYSTVL-----AGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVE 457
Query: 370 AYEIIKEMPMRPTISVWGALLN 391
+ + +P + ++ W A+L
Sbjct: 458 SARVFYSIPAKDIVA-WSAMLT 478
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 189/404 (46%), Gaps = 20/404 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E ++PN FTF + A + I G Q+HA+ +K+G FV + MY K+ +
Sbjct: 196 MQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEM 255
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +FD M R+ TWN I G F +R G + FC L
Sbjct: 256 VGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKL 315
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-GIIDKNDVS 179
CS L +QLH +V++G++ + L+ Y KC+ V A +F N V+
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +VQN E +F REGV P F S+VL+ L +HA +
Sbjct: 376 WTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQII 431
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA E V +AL+D Y K G++ ++ F +P +++V W+A++ G A ++ A+
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAME 491
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGA-VEKGMKIFYSMTLKYGIKPGAEHYACV 357
F ++ E V PN T V++ACS + A VE G +I + +K G + CV
Sbjct: 492 VFIQLVK---EGVKPNEYTFSSVINACSSSAATVEHGKQIHAT-----AVKSGKSNALCV 543
Query: 358 ----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + + G ++ A ++ R +S W +++ +G
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVS-WNSMITGYGQHG 586
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 5/328 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDE P ++++ +N + + + A+ F +L +G D +T L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+GRQ+H ++SGF +VSV LVD Y K + + +FD + KN VSW S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y +N + + + EGV P F ++VL A A + +E G VHA+ VK
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E FV +AL+ MY K + DAE F+ M R+ V WN +IGGYA G L F+
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIG---FYLEGFQM 293
Query: 304 MTSMRCEAVPNYVTLVCV-LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
MR V T+ C L CS+ + K + +K G + + ++
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQREL-NFTKQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ VD A+++ + W A++
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMI 380
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+E + PN++TF + A S+ V GKQ+HA A+KSG+ + + V + MYSK G
Sbjct: 498 KEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI 557
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A+K+F ER++ +WN+ I+ G K A++ F ++ G D +TF L AC
Sbjct: 558 ESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTAC 617
Query: 122 SDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L++ G + +++ D + + +VD Y + A + +G+
Sbjct: 618 THAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGM 669
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/589 (38%), Positives = 329/589 (55%), Gaps = 7/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E F + +A ++L G Q+H L +K G ++FVG + DMYSK G
Sbjct: 167 MRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGE 226
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K F+EMP ++ W + I V G K A+ A++ + D C+ L+A
Sbjct: 227 LSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSA 286
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS G+ LH +++ GF+ + N L D Y K ++ A VF I + +S
Sbjct: 287 CSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ--IHSDCISI 344
Query: 181 CSMLVV---YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
S+ + YV+ + E F+ RR G+EP +F +S++ ACA A LE G +H
Sbjct: 345 VSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQ 404
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + + FV S LVDMYGKCG + F+++ + + WN ++G ++ G A
Sbjct: 405 VVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNA 464
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ +F M + PN VT V +L CS AG VE G+ F SM YG+ P EHY+CV
Sbjct: 465 IETFNGMIHRGLK--PNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCV 522
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DLLGRAG + A + I MP P + W + L AC+++G E + AAD L KL+P +S
Sbjct: 523 IDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENS 582
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G HVLLSN++A +WE+ +RK +KD + K G SW+ ++N+ H+F +D SH +
Sbjct: 583 GAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKK 642
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI L L +++K GY+P T L D+++ K + +HSE+IA+AF L+ P G+PI
Sbjct: 643 EIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPI 702
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ KNLR+C DCHSA KFIS + R +IVRD +RFH F +G CSC DYW
Sbjct: 703 IVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 187/382 (48%), Gaps = 8/382 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLHA+ ++ G + + F+ ++YSK G D K+FD+M +RN+ +W + I+
Sbjct: 94 GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R + A+ +F +R G + L AC+ +Q G Q+H +V+ GF + V
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L D Y KC E+ A F+ + K+ V W SM+ +V+N + + ++ + V
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
++ S LSAC+ + G+S+HA +K E F+G+AL DMY K G + A
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333
Query: 269 AFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F + ++V AII GY + ALS+F ++ E PN T ++ AC+
Sbjct: 334 VFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIE--PNEFTFTSLIKACAN 391
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+E G ++ + +K+ K + +VD+ G+ GL D + ++ E+ P W
Sbjct: 392 QAKLEHGSQL-HGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWN 449
Query: 388 ALLNACRVYGKPELGRIAADNL 409
L+ V+ + LGR A +
Sbjct: 450 TLVG---VFSQHGLGRNAIETF 468
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L G+QLH L+R G N + N ++ Y KC E+ +FD + +N VSW S++
Sbjct: 91 LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITG 150
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ N + F R EG F +SSVL AC + ++ G VH + VK
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+FVGS L DMY KCG + DA AF +MP ++ V W ++I G+ G AL+++ +M +
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + L LSACS A G K ++ LK G + + D+ ++G
Sbjct: 271 D--DVFIDQHVLCSTLSACSALKASSFG-KSLHATILKLGFEYETFIGNALTDMYSKSG 326
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ ++ AR L G+ +HA+ ++ N F+ + +++Y KCG + F+KM
Sbjct: 78 VAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMS 137
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEK 333
+RN+V W +II G+AH ALSSF MR E + L VL AC+ GA++
Sbjct: 138 QRNMVSWTSIITGFAHNSRFQEALSSF---CQMRIEGEIATQFALSSVLQACTSLGAIQF 194
Query: 334 GMKIFYSMTLKYGIKPGAEHY--ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G ++ + + +K G G E + + + D+ + G + A + +EMP + + +W ++++
Sbjct: 195 GTQV-HCLVVKCGF--GCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAV-LWTSMID 250
Query: 392 A 392
Sbjct: 251 G 251
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/567 (40%), Positives = 335/567 (59%), Gaps = 13/567 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE---RNLATWNAYISNA 86
+QLH + G V + YS+ G ++A ++F EM E R+ +WNA I
Sbjct: 159 RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVAC 218
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
A++ F + R G + D+ T + L A + L G Q HG +++SGF GN
Sbjct: 219 GQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNS 278
Query: 147 SVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE--ENGCQMFLTA 203
V +GL+D Y KC + + VF+ I + V W +M+ + Q YE+ E+G F
Sbjct: 279 HVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQ-YEDLSEDGIWCFREM 337
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGS 262
+ G P D V SAC+ ++ +G+ VHA+A+K+ + N + V +ALV MY KCG+
Sbjct: 338 QHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGN 397
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ DA F+ MPE N+V N++I GYA G +L FE M ++ + PN +T + VL
Sbjct: 398 VHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELM--LQKDIAPNTITFIAVL 455
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SAC G VE+G K F M ++ I+P AEHY+C++DLLGRAG + A II+ MP P
Sbjct: 456 SACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPG 515
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
W LL ACR +G EL AA+ +L+P ++ +V+LSNM+A+ RWEEA V++
Sbjct: 516 SIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRL 575
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
M++ G+KK GCSWI + ++H+F A+DTSH EI + ++ +MK AGY+PD +A
Sbjct: 576 MRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWA 635
Query: 503 LY---DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
L +VE +EK + +HSEK+A+AFGLI+ VPI + KNLRICGDCH+A K IS I
Sbjct: 636 LVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAI 695
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
GRE+ VRD +RFH F +G+CSC DYW
Sbjct: 696 TGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 230/515 (44%), Gaps = 81/515 (15%)
Query: 4 ECISPNDF-TFPCLFKASSALHIPVTGKQLHALALKS-------------------GQIH 43
+C P TF L KA A +TGK LHAL KS G +H
Sbjct: 2 QCTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLH 61
Query: 44 D------------VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+ VF + + Y+K L A ++FDE+P+ ++ ++N I+ G
Sbjct: 62 NAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGE 121
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+ A+ F +R D T + AC D + L RQLH F+V G+D SV N
Sbjct: 122 CRPALRLFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNA 179
Query: 152 LVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++ Y + + A+ VF + + +++VSW +M+V Q+ E ++F R G+
Sbjct: 180 VLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGL 239
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAE 267
+ F ++SVL+A + L G H + +K+ GN VGS L+D+Y KC G + +
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECR 299
Query: 268 IAFNKMPERNLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F ++ +LV WN +I G++ ++ ++ + F EM P+ + VCV SACS
Sbjct: 300 KVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFH--PDDCSFVCVTSACS 357
Query: 327 RAGAVEKGMKIFYSMTLKYGI----------------KPGAEHYA-CVVDLLGRAGLVD- 368
+ G ++ +++ +K I K G H A V D + +V
Sbjct: 358 NLSSPSVGKQV-HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL 416
Query: 369 -----------------RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL-- 409
R +E++ + + P + A+L+AC GK E G+ + +
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 410 -FKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
F+++P ++ ++ + ++ G+ +EA+ + + M
Sbjct: 477 RFRIEP-EAEHYSCMIDLLGRAGKLKEAERIIETM 510
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 8/344 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TG 59
M R + + FT + A + + V G Q H + +KSG + VG D+YSK G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 60 LKDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+ K+F+E+ +L WN IS + ++ I F ++ G PD +F
Sbjct: 294 GMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVT 353
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ACS+ S +G+Q+H ++S N VSV N LV Y KC V A+ VFD + + N
Sbjct: 354 SACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNM 413
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHA 236
VS SM+ Y Q+ E ++F ++ + P +VLSAC +E G+ +
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ + +E S ++D+ G+ G +++AE MP + W ++G G+ +
Sbjct: 474 MKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVE 533
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+A+ + E + YV L + ++ +R A V++ M+
Sbjct: 534 LAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/500 (42%), Positives = 313/500 (62%), Gaps = 2/500 (0%)
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
++G K A++ F + ++G + D IT AC LL G+Q+H +++GFD ++
Sbjct: 6 IIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 65
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V +G++D Y KC ++ A +VF+ I +DV+W SM+ V N E+ +++ R+
Sbjct: 66 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 125
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
V P ++ ++++ A + + LE GR +HA +K + FVG++LVDMY KCG+I+DA
Sbjct: 126 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 185
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F KM RN+ WNA++ G A G+A+ A++ F+ M S E P+ V+ + +LSACS
Sbjct: 186 YRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE--PDRVSFIGILSACS 243
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG + + +SM YGI+P EHY+C+VD LGRAGLV A ++I+ MP + + S+
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
ALL ACR+ G E G+ A LF L+P DS +VLLSN++AA RW++ RK MK
Sbjct: 304 RALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 363
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+KK G SWI VKN +H+F D SH + I + ++ + ++ GY+PDT F L DV
Sbjct: 364 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDV 423
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
E+EEK + +HSEK+A+A+GLI+ P IR+ KNLR+CGDCH+A K+IS + RE+++
Sbjct: 424 EDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVL 483
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH F DG CSC DYW
Sbjct: 484 RDANRFHHFRDGVCSCGDYW 503
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 4/339 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ T KA L + GKQ+HA A+K+G D+ V DMY K G +A +F
Sbjct: 29 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 88
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ + + W + IS V G A+ + +R++ PD TF + A S + L+
Sbjct: 89 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 148
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
GRQLH +++ + V LVD Y KC + A +F + +N W +MLV
Sbjct: 149 QGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA 208
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVAVKACVEGN 246
Q+ E +F + + G+EP +LSAC+ AGL E +H++ +E
Sbjct: 209 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH-AGLTSEAYEYLHSMPNDYGIEPE 267
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN-AIIGGYAHQGHADMALSSFEEMT 305
I S LVD G+ G +Q+A+ MP + N A++G QG + +
Sbjct: 268 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLF 327
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ YV L + +A +R V K+ +K
Sbjct: 328 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVK 366
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ + P+++TF L KASS + G+QLHA +K + D FVG S DMY+K G
Sbjct: 122 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F +M RN+A WNA + G + A++ F +++ G EPD ++F L+A
Sbjct: 182 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 241
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
CS L + LH G + + + LVD G+ V A V + +
Sbjct: 242 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 8/229 (3%)
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ Y+ + + ++F + G + +++ AC + L+ G+ +HA A+KA
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++ V S ++DMY KCG + +A I FN + + V W ++I G G+ D AL +
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M R +P+ T ++ A S A+E+G ++ ++ +K +VD+
Sbjct: 121 RMRQSR--VMPDEYTFATLIKASSCVTALEQGRQL-HANVIKLDCVSDPFVGTSLVDMYA 177
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ G ++ AY + K+M +R I++W A+L +G E A NLFK
Sbjct: 178 KCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAE----EAVNLFK 221
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/557 (37%), Positives = 329/557 (59%), Gaps = 3/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH + + H V + + Y+K G + A+K+F + ++ +++WNA I
Sbjct: 371 KELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G P+ A+ + +G +PD T + L AC+ LQ G+++HG+++R+G + + V
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+ Y C + A+V+FD + DKN VSW +M+ Y QN +F + EG++
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ I SV AC++++ L LG+ H +KA + FVG +++DMY K G I+++
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKV 609
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ + ++N+ WNAII + GH A+ +E M + +P+ T + +L AC AG
Sbjct: 610 FDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMK--KVGQMPDRFTYIGILMACGHAG 667
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G+K F M I+P EHYAC++D+L RAG +D A ++ EMP +W +L
Sbjct: 668 LVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSL 727
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L +CR +G E+G A L +L+P+ + N+VLLSN++A G+W+ VR+ MK++G++
Sbjct: 728 LRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQ 787
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K AGCSWI V R++ F D+ ++ EI+ + +L E + GY P+T+ L++V EE
Sbjct: 788 KDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEE 847
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK+ + HSEK+A++FGL+ G +RI KNLRIC DCH+A K IS V RE++VRDN
Sbjct: 848 EKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDN 907
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F DG CSC DYW
Sbjct: 908 KRFHHFRDGLCSCCDYW 924
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 185/372 (49%), Gaps = 9/372 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H LA+K G +V V + MYSK G ++A F + +N+ +WN IS L
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326
Query: 89 GGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G A + ++ G E + +T L AC D L+ ++LHG+ R F +V
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HV 385
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+ N + Y KC + A+ VF GI DK SW +++ + QN + +
Sbjct: 386 ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F ISS+L ACA + L+ G+ +H ++ +E + FVG++L+ Y CG A
Sbjct: 446 GQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY-VTLVCVLSAC 325
+ F++M ++NLV WNA+I GY+ G +L+ F + S E + ++ + +V V AC
Sbjct: 506 RVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLS---EGIQSHEIAIVSVFGAC 562
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S+ A+ G K + LK A ++D+ ++G + + ++ + + ++
Sbjct: 563 SQLSALRLG-KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDK-NVAS 620
Query: 386 WGALLNACRVYG 397
W A++ A ++G
Sbjct: 621 WNAIIVAHGIHG 632
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
P++FTFP + KA + G+ +H + +K G + DVFVG + MY K G D+A K
Sbjct: 143 QPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMK 202
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCS 125
+FD MPE NL +WN+ I G +++ D + L G PD++T L C+
Sbjct: 203 VFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEG 262
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+ +G +HG V+ G V V N +V Y KC + A++ F +KN VSW +M+
Sbjct: 263 EVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMIS 322
Query: 186 VYVQNYEEENGCQMFLTARREGVEPK--DFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ + + + +G E K + I +VL AC L + +H + + C
Sbjct: 323 AFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF 382
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ ++ + +A + Y KCG++ AE F+ + ++ + WNA+IGG+A G AL +
Sbjct: 383 Q-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQ 441
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
MT + P++ T+ +L AC+ +++ G +I + L+ G++ ++
Sbjct: 442 MTYSGQQ--PDWFTISSLLLACAHLKSLQYGKEI-HGYVLRNGLETDFFVGTSLLSHYIH 498
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
G A + M + +S W A+++ G P
Sbjct: 499 CGKASSARVLFDRMKDKNLVS-WNAMISGYSQNGLP 533
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 189/388 (48%), Gaps = 9/388 (2%)
Query: 28 TGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
TG++LH S +D + MY+ G D+ +FD M +NL WNA +S
Sbjct: 61 TGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGY 120
Query: 87 VLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G + + F++L T +PD TF + + AC ++LG +HG +++ G +
Sbjct: 121 TRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLD 180
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR- 204
V V N LV YGKC V A VFD + + N VSW SM+ + +N + + +
Sbjct: 181 VFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLG 240
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EG+ P + ++L CA +++G +H +AVK + + V +A+V MY KCG +
Sbjct: 241 EEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLN 300
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+A+++F K +N+V WN +I ++ +G + A + +EM E N VT++ VL A
Sbjct: 301 EAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPA 360
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C + + +K + + ++ + E + + G ++ A ++ + + T+S
Sbjct: 361 CLDKLQL-RSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDK-TVS 417
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKL 412
W AL+ G P R A LF++
Sbjct: 418 SWNALIGGHAQNGDP---RKALHLLFQM 442
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 147/285 (51%), Gaps = 9/285 (3%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG-LVDFYGKCNEVGLAKVVFDGIIDK 175
L AC + ++ GR+LH F+ S N V N L+ Y C +++VFD + K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +++ Y +N + ++F+ + +P +F SV+ AC I + LG +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H + +K + ++FVG+ALV MYGKCG++ +A F+ MPE NLV WN++I ++ G
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG-- 226
Query: 295 DMALSSFEEMTSMRCEA--VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ SF+ + M E +P+ VT+V +L C+ G V+ GM I + + +K G+
Sbjct: 227 -FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGI-HGLAVKLGLSEEVM 284
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+V + + G ++ A + + +S W +++A + G
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVS-WNTMISAFSLEG 328
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 162/359 (45%), Gaps = 7/359 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
P+ FT L A + L GK++H L++G D FVG S Y G A
Sbjct: 448 QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARV 507
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD M ++NL +WNA IS G P ++ F G + I + ACS S
Sbjct: 508 LFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSA 567
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+LG++ HG+++++ + V ++D Y K + ++ VFDG+ DKN SW +++V
Sbjct: 568 LRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVA 627
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEG 245
+ + + +++ ++ G P F +L AC +E G + + +E
Sbjct: 628 HGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEP 687
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ + L+DM + G + DA N+MPE + W++++ G ++ +++
Sbjct: 688 KLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKL 747
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG-----IKPGAEHYACVV 358
+ + NYV L + + + V + ++ + L+ I+ G Y+ VV
Sbjct: 748 LELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVV 806
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E I ++ +F A S L GK+ H LK+ Q D FVGCS DMY+K+G +
Sbjct: 546 EGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE 605
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ K+FD + ++N+A+WNA I + G K AI+ + +++ G PD T+ L AC
Sbjct: 606 SRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGH 665
Query: 124 CSLLQLG 130
L++ G
Sbjct: 666 AGLVEEG 672
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 335/559 (59%), Gaps = 24/559 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H+LA+KS + + DMYSK G D A ++F++M ERN+ +W + I+
Sbjct: 270 GKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR AI + + G + D++ + L+AC+ L G+ +H ++ + + N+ V
Sbjct: 330 DGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+D Y KC + A VF ++ K+ +SW +M+ +
Sbjct: 390 CNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI---------------------GEL 428
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++ +L ACA ++ LE G+ +H ++ + V +ALVD+Y KCG + A +
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P ++LV W +I GY G+ + A+++F EM E P+ V+ + +L ACS +
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIE--PDEVSFISILYACSHS 546
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + FY M + I+P EHYAC+VDLL R G + +AYE I+ +P+ P ++WGA
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR+Y EL A+ +F+L+P ++G +VLL+N++A +WEE +R+++ G+
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGL 666
Query: 449 KKGAGCSWISVKNRIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+K GCSWI +K ++++F ++SH + +I+++L K+R +MK GY P T +AL + +
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E +K + HSEK+A+AFGL+A+PP +R+TKNLR+CGDCH KF+S RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F +GYCSC +W
Sbjct: 787 DSNRFHHFKNGYCSCRGFW 805
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 171/336 (50%), Gaps = 25/336 (7%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ +R++ +WN+ IS V G + ++ + + G + DL T + L C
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGC 261
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ L LG+ +H ++S F+ ++ N L+D Y KC ++ A VF+ + ++N VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + ++ +EGV+ +S+L ACAR L+ G+ VH
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN 381
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N+FV +AL+DMY KCGS+ A F+ M ++++ WN +IG
Sbjct: 382 NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG--------------- 426
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E P+ T+ C+L AC+ A+E+G +I + L+ G +VDL
Sbjct: 427 --------ELKPDSRTMACILPACASLSALERGKEI-HGYILRNGYSSDRHVANALVDLY 477
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G++ A + +P + +S W +++ ++G
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVS-WTVMISGYGMHG 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A ++L GK++H L++G D V + D+Y K G+ A
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P ++L +W IS + G AI F +R G EPD ++F + L ACS
Sbjct: 488 LLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 126 LLQLGRQLHGFLVRSGFD 143
LL+ G + +++++ F+
Sbjct: 548 LLEQGWRFF-YIMKNDFN 564
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 57/269 (21%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
ID+ + + ++ + Q EN ++ ++ +E K + SSVL CA L G+
Sbjct: 62 IDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTY--SSVLQLCAGSKSLTDGK 119
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD--------------------------- 265
VH++ V + +G LV +Y CG +++
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 266 ------------------------AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
A F+K+ +R+++ WN++I GY G + L +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M + + + T++ VL C+ +G + G K +S+ +K + ++D+
Sbjct: 240 KQMMYLGIDV--DLATIISVLVGCANSGTLSLG-KAVHSLAIKSTFERRINFSNTLLDMY 296
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +D A + ++M R +S W +++
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVS-WTSMI 324
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 343/617 (55%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+++T+P L K + G++LH +K G +VFV + +YS +G
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD + ++ TWN IS + ++ F + R P IT + L+A
Sbjct: 170 VSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSA 229
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC--------------------- 159
CS L +G+++H ++ + + N L+D Y C
Sbjct: 230 CSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISW 289
Query: 160 ----------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+VGLA+ FD + +++ VSW +M+ Y+Q + +F + ++
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P +F + S+L+ACA + LELG + A K ++ + FVG+AL+DMY CG+++ A
Sbjct: 350 PDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRI 409
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
FN MP R+ + W A+I G A G+ + AL F +M ++ P+ VT + VL AC+ +G
Sbjct: 410 FNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQM--LKASITPDEVTCIGVLCACTHSG 467
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V+KG K F MT ++GI+P HY C+VDLLGRAG + A+E+IK MP++P VWG+L
Sbjct: 468 MVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSL 527
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACRV+ E+ +AA + +L+P + +VLL N++AA RWE+ VRK M D GIK
Sbjct: 528 LGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIK 587
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCS I + +H F A D H ++ EI + L ++ ++K AGY PDT+ D+ EE
Sbjct: 588 KTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEE 647
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK + V HSEK+A+AFGLI+ PGV IRI KNLR+C DCH K +S + REVIVRD
Sbjct: 648 EKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDR 707
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 708 TRFHHFRHGSCSCKDYW 724
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 181/404 (44%), Gaps = 37/404 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+H+ + +G I + V AF + G + A +FD MP N WN I
Sbjct: 36 KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G P +A+ + + G PD T+ L + + ++ GR+LH +V+ GF NV
Sbjct: 96 RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ Y EV +A+ VFD + V+W M+ Y ++ + + ++F R
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD-- 265
V P + SVLSAC+++ L +G+ VH +E + +AL+DMY CG +
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTAL 275
Query: 266 -----------------------------AEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
A F+KMPER+ V W A+I GY
Sbjct: 276 GIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKE 335
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
LS F EM + + P+ T+V +L+AC+ GA+E G I + K IK +
Sbjct: 336 VLSLFREMQAANIK--PDEFTMVSILTACAHLGALELGEWI-KAYIDKNEIKIDSFVGNA 392
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ G V++A I MP R IS W A++ + G E
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAMPHRDKIS-WTAVIFGLAINGYGE 435
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 17/338 (5%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG---LAKVVFDGIID 174
L+ C + +Q+H + +G N V ++ F K +E+G A++VFD +
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCK-HELGDMEYARMVFDTMPG 81
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N W +M+ Y + + M+ GV P ++ +L R ++ GR +
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK N+FV +AL+ +Y G + A F++ + ++V WN +I GY
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEH 353
D ++ F+EM MR +P+ +TLV VLSACS+ + G ++ Y LK I+P
Sbjct: 202 DESMKLFDEMERMR--VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK--IEPVRVL 257
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLF-K 411
++D+ G +D A I M R IS W A+ V G LG++ A N F K
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVIS-WTAI-----VTGFTNLGQVGLARNYFDK 311
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+ D + + + + R++E + +EM+ IK
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 328/586 (55%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN +T+P + K L G+Q+H+ +K+ + +V DMY+K G
Sbjct: 464 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGK 523
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A + +++ +W I+ A+ F + G D + ++A
Sbjct: 524 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 583
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H SGF ++ N LV Y KC + A + F+ ++++W
Sbjct: 584 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAW 643
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q+ E ++F REG++ +F S + A + A ++ G+ VHAV K
Sbjct: 644 NALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITK 703
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V +A++ MY KCGSI DA+ F ++ +N V WNA+I Y+ G AL S
Sbjct: 704 TGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDS 763
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + PN+VTLV VLSACS G V+KG++ F SM +YG+ P EHY CVVD+
Sbjct: 764 FDQM--IHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDM 821
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAGL+ RA + I EMP+ P VW LL+AC V+ E+G AA +L +L+P DS +
Sbjct: 822 LTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 881
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A +W+ DL R++MK+ G+KK G SWI VKN IH F D +H EI
Sbjct: 882 VLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 941
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L + GY+ D L ++++E+K + HSEK+A++FGL+++P +PI +
Sbjct: 942 EYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVM 1001
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH KF+S + RE+IVRD RFH F G CSC DYW
Sbjct: 1002 KNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 182/395 (46%), Gaps = 4/395 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P + F + A + G+QLH L LK G D +V + +Y G A+
Sbjct: 267 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAE 326
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F M +R+ T+N I+ G + A++ F ++ G EPD T + + ACS
Sbjct: 327 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+QLH + + GF N + L++ Y KC+++ A F +N V W MLV
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + N ++F + E + P + S+L C R+ LELG +H+ +K +
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N +V S L+DMY K G + A + +++V W +I GY D AL++F +M
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + V L +SAC+ A+++G +I ++ G +V L + G
Sbjct: 567 DRGIRS--DEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ AY ++ I+ W AL++ + G E
Sbjct: 624 NIEEAYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 657
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 6/389 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
I PN T L + + + G++LH+ LK G ++ + D Y G D A
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FDEMPER + TWN I F + P+ TF L AC
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 125 SL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S+ + Q+H ++ G + VCN L+D Y + V A+ VFDG+ K+ SW +M
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ +N E ++F G+ P + SSVLSAC +I LE+G +H + +K
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ +V +ALV +Y GS+ AE F+ M +R+ V +N +I G + G+ + A+ F+
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M E P+ TL ++ ACS G + G ++ ++ T K G + +++L +
Sbjct: 363 MQLDGLE--PDSNTLASLVVACSSDGTLFSGQQL-HAYTTKLGFASNDKIEGALLNLYAK 419
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ A E + + +W +L A
Sbjct: 420 CSDIETALNYFLETEVENVV-LWNVMLVA 447
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 14/433 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + P+ T L A S+ +G+QLHA K G + + + ++Y+K
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSD 422
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A F E N+ WN + L +N+ F ++ P+ T+ + L
Sbjct: 423 IETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 482
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+LG Q+H ++++ F N VC+ L+D Y K ++ A + K+ VSW
Sbjct: 483 CIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 542
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q ++ F G+ + +++ +SACA + L+ G+ +HA +
Sbjct: 543 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA---Q 599
Query: 241 ACVEG---NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
ACV G ++ +ALV +Y KCG+I++A +AF + + + WNA++ G+ G+ + A
Sbjct: 600 ACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 659
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M ++ N T + A S +++G ++ +++ K G E +
Sbjct: 660 LRVFARMNREGIDS--NNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAI 716
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DPND 416
+ + + G + A + E+ M+ +S W A++NA Y K G A D+ ++ N
Sbjct: 717 ISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINA---YSKHGFGSEALDSFDQMIHSNV 772
Query: 417 SGNHVLLSNMFAA 429
NHV L + +A
Sbjct: 773 RPNHVTLVGVLSA 785
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 187/398 (46%), Gaps = 7/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E ++PN+ TF + +A + +Q+HA + G V D+YS+ G
Sbjct: 160 MVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNG 219
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++FD + ++ ++W A IS AI F ++ G P F + L+
Sbjct: 220 FVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLS 279
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC L++G QLHG +++ GF + VCN LV Y + A+ +F + ++ V+
Sbjct: 280 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT 339
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ +++ Q E ++F + +G+EP ++S++ AC+ L G+ +HA
Sbjct: 340 YNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTT 399
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K N + AL+++Y KC I+ A F + N+V WN ++ Y G D +
Sbjct: 400 KLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRN 456
Query: 300 SFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
SF M+ E VPN T +L C R G +E G +I +S +K + A + ++
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTSFQLNAYVCSVLI 515
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
D+ + G +D A++I+ + +S W ++ Y
Sbjct: 516 DMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQY 552
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 15/331 (4%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-LLQLGRQLHGFLVRSGFDGNVSVCNG 151
+N ID+ N G P+ T L C + L GR+LH +++ GFD N +
Sbjct: 52 ENGIDSVEN---CGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEK 108
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L+DFY ++ A VFD + ++ +W M+ +F E V P
Sbjct: 109 LLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPN 168
Query: 212 DFMISSVLSAC-ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ S VL AC ++ +HA + + + V + L+D+Y + G + A F
Sbjct: 169 EGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVF 228
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ + ++ W A+I G + A+ F +M + +P VLSAC + +
Sbjct: 229 DGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGI--MPTPYAFSSVLSACKKIES 286
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+E G ++ + + LK G ++ Y C +V L G + A I M R ++ +
Sbjct: 287 LEIGEQL-HGLVLKLGF--SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT-YNT 342
Query: 389 LLNACRV--YGKPELGRIAADNLFKLDPNDS 417
L+N YG+ + L L+P+ +
Sbjct: 343 LINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 329/587 (56%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN +T L A++ G+ +HA K G DV V + MY K G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D K+++ M +R+L +WNAY+S G + F ++ G P++ TF + L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + GRQ+H ++++ D N VC L+D Y KC + A V F+ + ++ +W
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q + E F ++EGV+P +F ++ LS C+ +A LE G+ +H++ K
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++FVGSALVDMY KCG +++AE F + R+ + WN II GYA G + AL++
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + P+ VT +LSACS G VE+G + F SM +GI P +H AC+VD
Sbjct: 706 FRMMLD---EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVD 762
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGR G D + I++M + +W +L A +++ LG AA+ LF+L P + +
Sbjct: 763 ILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESS 822
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN+FA GRW++ VR M G+KK GCSW+ ++H F + D SH + EI
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L +L E+ + Y+P T + L++V E EK + HSE++AL F LI+ IRI
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH K IS I +E++VRD RFH F +G CSC+D+W
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 2/337 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN+FT KA S GKQ+HA A K G + D+FVG + D+Y+K G
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A KMF MPE+N TWN ++ G + F ++ + + T L
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G+ +H +++ G++GN + GLVD Y KC A VF I + V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Q + E ++F R P + I S+LSA L+ G+S+HA K
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E ++ V +ALV MY K G + D + M +R+L+ WNA + G G D L+
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
F M + +PN T + +L +CS V G ++
Sbjct: 504 FYHM--LEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 187/375 (49%), Gaps = 7/375 (1%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
K +H L +K D + S ++Y+K A + +MP+R++ +W A I V
Sbjct: 130 VAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLV 189
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G ++I F ++ G P+ T L ACS C L LG+Q+H + G ++
Sbjct: 190 AEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLF 249
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V + LVD Y KC E+ LA +F G+ ++NDV+W +L Y Q + ++F +
Sbjct: 250 VGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELD 309
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+ +F +++VL CA L+ G+ +H++ +K EGN F+G LVDMY KCG DA
Sbjct: 310 VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAI 369
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F + + ++V W+A+I QG ++ ++ F M + +PN T+ +LSA +
Sbjct: 370 GVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR--LGDTLPNQYTICSLLSAATN 427
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G ++ G I ++ KYG + +V + + G V ++ + M R IS W
Sbjct: 428 TGNLQYGQSI-HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS-WN 485
Query: 388 ALLNA---CRVYGKP 399
A L+ C +Y +P
Sbjct: 486 AYLSGLHDCGMYDRP 500
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 7/321 (2%)
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
L + + L C+ L + + +HG +V+ + + + LV+ Y KC A++V
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ D++ VSW +++ V + +F + EG+ P +F +++ L AC+ L+L
Sbjct: 172 KMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDL 231
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+ +HA A K + ++FVGSALVD+Y KCG I+ A F MPE+N V WN ++ GYA
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+G L F M M + N TL VL C+ + +++G ++ +S+ +K G + G
Sbjct: 292 RGDVTGVLKLFCSM--MELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYE-G 347
Query: 351 AEHYAC-VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
E C +VD+ + GL A + K + +P I VW AL+ G+ E I +L
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE-ESIKLFHL 405
Query: 410 FKLDPNDSGNHVLLSNMFAAT 430
+L + + S + AAT
Sbjct: 406 MRLGDTLPNQYTICSLLSAAT 426
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 331/559 (59%), Gaps = 24/559 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H+LA+KS + + DMYSK G D A ++F++M ERN+ +W + I+
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR AI + + G + D++ + L+AC+ L G+ +H ++ + + N+ V
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+D Y KC + A VF ++ K+ +SW +M+ +
Sbjct: 390 CNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------------GEL 428
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++ VL ACA ++ LE G+ +H ++ + V +ALVD+Y KCG + A +
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P ++LV W +I GY G+ + A+++F EM E P+ V+ + +L ACS +
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE--PDEVSFISILYACSHS 546
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + FY M + I+P EHYAC+VDLL R G + +AYE I+ +P+ P ++WGA
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR Y EL A+ +F+L+P +SG +VLL+N++A +WEE +R+++ G+
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 449 KKGAGCSWISVKNRIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+K GCSWI +K ++++F ++SH + I+++L K+R +MK G+ P T +AL + +
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINAD 726
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E +K + HSEK+A+AFGL+ +PP IR+TKNLR+CGDCH KF+S RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F DGYCSC +W
Sbjct: 787 DPNRFHHFKDGYCSCRGFW 805
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 171/336 (50%), Gaps = 25/336 (7%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ +R++ +WN+ IS V G + + + + G + DL T + L C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ L LG+ +H ++S F+ ++ N L+D Y KC ++ A VF+ + ++N VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + ++ +EGV+ I+S+L ACAR L+ G+ VH
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N+FV +AL+DMY KCGS++ A F+ M ++++ WN +IG
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG--------------- 426
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E P+ T+ CVL AC+ A+E+G +I + L+ G +VDL
Sbjct: 427 --------ELKPDSRTMACVLPACASLSALERGKEI-HGYILRNGYSSDRHVANALVDLY 477
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G++ A + +P + +S W ++ ++G
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVS-WTVMIAGYGMHG 512
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 159/372 (42%), Gaps = 63/372 (16%)
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+ + +NA I + G +NA++ +++ E + T+ + L C+ G++
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKS--ELETKTYSSVLQLCAGLKSFTDGKK 120
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG--------------------- 171
+H + + + ++ LV FY C ++ + VFD
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 172 ------------------------------IIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+ D++ +SW SM+ YV N E G ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
G++ I SVL CA L LG++VH++A+K+ E I + L+DMY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVC 320
+ A F KM ERN+V W ++I GY G +D A+ ++M E V + V +
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK---EGVKLDVVAITS 357
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMP 378
+L AC+R+G+++ G + + + + C ++D+ + G ++ A + M
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 379 MRPTISVWGALL 390
++ IS W ++
Sbjct: 415 VKDIIS-WNTMI 425
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A ++L GK++H L++G D V + D+Y K G+ A
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P ++L +W I+ + G AI F +R G EPD ++F + L ACS
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 126 LLQLGRQLHGFLVRSGFD 143
LL+ G + +++++ F+
Sbjct: 548 LLEQGWRFF-YIMKNDFN 564
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 108/269 (40%), Gaps = 57/269 (21%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
ID + + ++ + Q + EN ++ ++ +E K + SSVL CA + G+
Sbjct: 62 IDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTY--SSVLQLCAGLKSFTDGK 119
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM------------------- 273
VH++ V + +G LV Y CG +++ F+ M
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 274 ---------------------PE-----------RNLVCWNAIIGGYAHQGHADMALSSF 301
PE R+++ WN++I GY G + L +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M + + + T++ VL C+ +G + G K +S+ +K + ++D+
Sbjct: 240 KQMMYLGIDV--DLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +D A + ++M R +S W +++
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVS-WTSMI 324
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 328/586 (55%), Gaps = 36/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+++T+PC+ KA S G Q+H +K G ++++G MY K
Sbjct: 128 MANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKW 187
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++ DEMP R++ +WN+ ++ GR +A+ + +PD T + L A
Sbjct: 188 LDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA 247
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ S C+ V K +F + +K+ +SW
Sbjct: 248 VTNTS---------------------------------CDNVLYVKDMFVKLKEKSLISW 274
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ VYV N ++L + GVEP ISSVL AC ++ LGR +H +
Sbjct: 275 NVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ + +AL+DMY KCG +++A F++M R++V W ++I Y G A++
Sbjct: 335 KKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M P+++ V VL+ACS AG V++G F M +YGI PG EHY C+VDL
Sbjct: 395 FKKMRD--SGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDL 451
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D AY + ++MPM P VWG+LL+ACRVY + +AAD+LF+L P SG +
Sbjct: 452 LGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYY 511
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A GRW++ + VR M GIKK G S + + + ++ F A D SH ++ EI
Sbjct: 512 VLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIY 571
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L MK GY+P+T+ AL+DVEEE+K + HSEK+A+ F ++ PG IRIT
Sbjct: 572 KALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRIT 631
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+R+CGDCH A K IS I RE+I+RD +RFH F DG CSC DYW
Sbjct: 632 KNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 41/353 (11%)
Query: 131 RQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++LH L+ N S+ L+ Y C E + +FD I DKN V + M+ YV
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N ++ +F T +G P ++ VL AC+ L +G +H VK ++ N+++
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+ LV MYGKC + A ++MP R++V WN+++ GYA G + AL EM ++
Sbjct: 175 GNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKL 234
Query: 310 EAVPNYVTLVCVLSACSRAGA-------------VEKGMKIFYSMTLKY----------- 345
+ P+ T+ +L A + EK + + M Y
Sbjct: 235 K--PDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVD 292
Query: 346 --------GIKPGAEHYACVVDL---LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
G++P A + V+ L A L R +E ++ +RP + + AL++
Sbjct: 293 LYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYA 352
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
G + R D + D + + + + +G+ ++A + K+M+D G
Sbjct: 353 KCGCLKEARAVFDQMMF---RDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 333/581 (57%), Gaps = 3/581 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
S N TF A G+ LH L + SG ++ +G + MY K G ++ +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCS 125
+ +MP R++ WNA I P A+ AF +R G + IT + L+AC
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LL+ G+ LH ++V +GF+ + V N L+ Y KC ++ ++ +F+G+ ++N ++W +ML
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ E ++ R GV F S LSA A++A LE G+ +H +AVK E
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ F+ +A DMY KCG I + R+L WN +I G+ + ++F EM
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M + P +VT V +L+ACS G V+KG+ + + +G++P EH CV+DLLGR+G
Sbjct: 659 EMGIK--PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 716
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ A I +MPM+P VW +LL +C+++G + GR AA+NL KL+P D +VL SN
Sbjct: 717 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSN 776
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
MFA TGRWE+ + VRK+M IKK CSW+ +K+++ F D +H + EI A L
Sbjct: 777 MFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED 836
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+++ +K +GY+ DT+ AL D +EE+K + +HSE++ALA+ L++ P G +RI KNLRI
Sbjct: 837 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 896
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHS +KF+S ++GR +++RD RFH F G CSC DYW
Sbjct: 897 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 189/401 (47%), Gaps = 5/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+ + + + L G+Q+ +KSG + V S M G
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A+ +FD+M ER+ +WN+ + G + + F +RR E + T L+
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ GR +HG +V+ GFD V VCN L+ Y A +VF + K+ +SW
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 330
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ +V + + + + G +S L+AC E GR +H + V
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 390
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + N +G+ALV MYGK G + ++ +MP R++V WNA+IGGYA D AL++
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ +MR E V NY+T+V VLSAC G + + K ++ + G + ++
Sbjct: 451 FQ---TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G + + ++ + R I+ W A+L A +G E
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIIT-WNAMLAANAHHGHGE 547
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 188/393 (47%), Gaps = 8/393 (2%)
Query: 2 RREC---ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
R+ C I P+ F L A + + G Q+H KSG + DV+V + +Y
Sbjct: 47 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 106
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL + K+F+EMP+RN+ +W + + G P+ ID + +R G + +
Sbjct: 107 YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 166
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+++C LGRQ+ G +V+SG + ++V N L+ G V A +FD + +++
Sbjct: 167 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 226
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+SW S+ Y QN E ++F RR E +S++LS + + GR +H +
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + + V + L+ MY G +A + F +MP ++L+ WN+++ + + G + A
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L M S NYVT L+AC EKG +I + + + G+ +
Sbjct: 347 LGLLCSMIS--SGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNAL 403
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V + G+ G + + ++ +MP R ++ W AL+
Sbjct: 404 VSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 435
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 13/342 (3%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY+K G A +FD MP RN +WN +S V G ++ F + G +P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 114 FCAFLNACSDC-SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + AC S+ + G Q+HGF+ +SG +V V ++ YG V ++ VF+ +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
D+N VSW S++V Y E E ++ R EGV + +S V+S+C + LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+ VK+ +E + V ++L+ M G G++ A F++M ER+ + WN+I YA G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
H + + F M E N T+ +LS + G I + + +K G +
Sbjct: 241 HIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGI-HGLVVKMGF----D 293
Query: 353 HYACVVDLLGR----AGLVDRAYEIIKEMPMRPTISVWGALL 390
CV + L R AG A + K+MP + IS W +L+
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLM 334
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + F+F A++ L + G+QLH LA+K G HD F+ +A DMYSK G
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 615
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ KM R+L +WN IS G + F + G +P +TF + L A
Sbjct: 616 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 675
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + R G + + C ++D G+ + A+ + + ND+
Sbjct: 676 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 735
Query: 179 SWCSML 184
W S+L
Sbjct: 736 VWRSLL 741
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 330/592 (55%), Gaps = 37/592 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AF--DMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
K +HA +++ I DVF AF D S T L D A ++F ++ NL +NA I
Sbjct: 34 KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
P A ++ +R G PD +TF + +C+ + +G Q HG +++ GF+ +
Sbjct: 94 HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153
Query: 146 VSVCNGLVDFYG-------------------------------KCNEVGLAKVVFDGIID 174
V V N LV Y KC +V A+ +FD + +
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
KN V+W +M+ Y QN + ++F + +GV + ++ SV+S+CA + LELG
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERA 273
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK + N+ +G+ALVDMY +CGSI A F +PER+ + W A+I G A G++
Sbjct: 274 HDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYS 333
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ +L F M + P +T VLSACS G VE+G +IF SM + ++P EHY
Sbjct: 334 ERSLKYFATM--VEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHY 391
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VDLLGRAG ++ A + +MP++P VWGALL ACR++ E+G L +L P
Sbjct: 392 GCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLP 451
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
SG +VLLSN++A WE+ +R+ MK G+KK G S I + R+H F D+SH
Sbjct: 452 QHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHP 511
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+I+ M ++ ++AAGY +T AL+D++EEEK + + HSEK+A+AFG++ G
Sbjct: 512 EMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAG 571
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCH+A K IS + GRE+IVRD NRFH F G CSC DYW
Sbjct: 572 TPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 181/396 (45%), Gaps = 41/396 (10%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS----- 56
+R+ + P++ TFP L K+ + LH G Q H +K G DV+V S MY+
Sbjct: 111 QRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDT 170
Query: 57 --------------------------KTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
K G + A K+FD+MPE+NL TW+ IS
Sbjct: 171 EAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNN 230
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A++ F L+ G + + +++C+ L+LG + H ++V++G N+ +
Sbjct: 231 HFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGT 290
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
LVD Y +C + A VF+ + +++ +SW +++ + E + F T G+ P
Sbjct: 291 ALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTP 350
Query: 211 KDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+D ++VLSAC+ +E G + ++ VE + +VD+ G+ G +++AE
Sbjct: 351 RDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF 410
Query: 270 FNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC-SR 327
KMP + N W A++G +A++ E + + + +P + +LS +
Sbjct: 411 VLKMPVKPNAPVWGALLGACRIHKNAEIG----ERVGKILIQLLPQHSGYYVLLSNIYAN 466
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
A EK ++ M K G+K H +++L GR
Sbjct: 467 AKEWEKVTEMRQMMKAK-GLKKPPGH--SLIELDGR 499
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 339/586 (57%), Gaps = 7/586 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+SPN T + A + ++ GK++H ++ G + DV VG D+Y K D A
Sbjct: 216 VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYAR 275
Query: 66 KMFDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL---ITFCAFLNAC 121
++FD M +N TW+A + V+ + A++ F L + + +T + C
Sbjct: 276 RIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVC 335
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ + L G LH + ++SGF ++ V N L+ Y KC + A F+ + ++ VS+
Sbjct: 336 ANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFT 395
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ YVQN E G +MFL + G+ P+ ++SVL ACA +AGL G H A+
Sbjct: 396 AIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIIC 455
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + +AL+DMY KCG I A F++M +R +V WN +I Y G AL F
Sbjct: 456 GFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLF 515
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+ M S + P+ VT +C++SACS +G V +G F +MT +GI P EHYAC+VDLL
Sbjct: 516 DNMQSEGLK--PDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLL 573
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
RAGL + I++MP+ P + VWGALL+ACRVY ELG + + KL P +GN V
Sbjct: 574 SRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFV 633
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD-TSHERNTEIQ 480
LLSNM++A GRW++A VR K+ G +K GCSWI + +H F SH + T+I
Sbjct: 634 LLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQIS 693
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L EMK GY ++++ DVEEEEK + +HSEK+A+AFG++++ P I +T
Sbjct: 694 NKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVT 753
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH+A KFIS + R++ VRD +RFH F DG C+C D+W
Sbjct: 754 KNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 211/422 (50%), Gaps = 20/422 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I+PN FTFP + KA SAL G+++H + +V+V + D Y+K G DDA
Sbjct: 115 ITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAK 174
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD+M +R++ WN+ IS L + + + + P+ T L A + +
Sbjct: 175 EVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVN 234
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSML 184
L+ G+++HGF VR GF G+V V G++D YGKC + A+ +FD + I KN+V+W +M+
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294
Query: 185 VVYV----QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
YV E CQ+ L + + + +++V+ CA + L G +H A+K
Sbjct: 295 GAYVVCDFMREALELFCQL-LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIK 353
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ VG+ L+ MY KCG I A FN+M R+ V + AII GY G+++ L
Sbjct: 354 SGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRM 413
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG--AEHYAC-- 356
F EM P TL VL AC+ + G S + Y I G A+ C
Sbjct: 414 FLEMQLSGIN--PEKATLASVLPACAHLAGLHYG-----SCSHCYAIICGFTADTMICNA 466
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDP 414
++D+ + G +D A ++ M R +S W ++ A ++G + DN+ L P
Sbjct: 467 LIDMYAKCGKIDTARKVFDRMHKRGIVS-WNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525
Query: 415 ND 416
+D
Sbjct: 526 DD 527
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 14/345 (4%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPER--NLATWNAYISNAVLGGRPKNAIDAFIN 101
D+++ CS + A +FD+MP R N+ WN I G + AID +
Sbjct: 59 DLYIACSELKI---------ARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYK 109
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ G P+ TF L ACS GR++H + R + NV V LVDFY KC
Sbjct: 110 MLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGC 169
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ AK VFD + ++ V+W SM+ + + + L + V P I VL A
Sbjct: 170 LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPA 229
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVC 280
A++ L G+ +H V+ G++ VG+ ++D+YGKC I A F+ M +N V
Sbjct: 230 VAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVT 289
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W+A++G Y AL F ++ ++ + V + VTL V+ C+ + G +
Sbjct: 290 WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG-TCLH 348
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+K G ++ + + G+++ A EM +R +S
Sbjct: 349 CYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVS 393
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y C+E+ +A+ VFD + KN V W ++ Y N E ++ G+
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F VL AC+ + GR +H + +E N++V +ALVD Y KCG + DA+
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 270 FNKMPERNLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+KM +R++V WN++I G++ H+G D + M+ + PN T+V VL A ++
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVA---RLLVQMQNDVSPNSSTIVGVLPAVAQV 233
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
++ G +I + ++ G ++D+ G+ +D A I M + W A
Sbjct: 234 NSLRHGKEI-HGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSA 292
Query: 389 LLNA 392
++ A
Sbjct: 293 MVGA 296
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I+P T + A + L G H A+ G D + + DMY+K G
Sbjct: 417 MQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGK 476
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+FD M +R + +WN I + G A+ F N++ G +PD +TF ++A
Sbjct: 477 IDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISA 536
Query: 121 CSDCSLLQLGR 131
CS L+ G+
Sbjct: 537 CSHSGLVAEGK 547
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 253 LVDMYGKCGSIQDAEIAFNKMPER--NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
LVD+Y C ++ A F+KMP R N+V WN +I YA G + A+ + +M
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY--G 114
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
PN T VL ACS +G +I + + ++ +VD + G +D A
Sbjct: 115 ITPNRFTFPFVLKACSALKEASEGREIHCDIK-RLRLESNVYVSTALVDFYAKCGCLDDA 173
Query: 371 YEIIKEMPMRPTISVWGALLNACRVY--GKPELGRIAADNLFKLDPNDS 417
E+ +M R ++ W ++++ ++ E+ R+ + PN S
Sbjct: 174 KEVFDKMHKRDVVA-WNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSS 221
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 333/581 (57%), Gaps = 3/581 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
S N TF A G+ LH L + SG ++ +G + MY K G ++ +
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 508
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCS 125
+ +MP R++ WNA I P A+ AF +R G + IT + L+AC
Sbjct: 509 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 568
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LL+ G+ LH ++V +GF+ + V N L+ Y KC ++ ++ +F+G+ ++N ++W +ML
Sbjct: 569 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 628
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ E ++ R GV F S LSA A++A LE G+ +H +AVK E
Sbjct: 629 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 688
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ F+ +A DMY KCG I + R+L WN +I G+ + ++F EM
Sbjct: 689 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 748
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M + P +VT V +L+ACS G V+KG+ + + +G++P EH CV+DLLGR+G
Sbjct: 749 EMGIK--PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 806
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ A I +MPM+P VW +LL +C+++G + GR AA+NL KL+P D +VL SN
Sbjct: 807 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSN 866
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
MFA TGRWE+ + VRK+M IKK CSW+ +K+++ F D +H + EI A L
Sbjct: 867 MFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED 926
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+++ +K +GY+ DT+ AL D +EE+K + +HSE++ALA+ L++ P G +RI KNLRI
Sbjct: 927 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 986
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHS +KF+S ++GR +++RD RFH F G CSC DYW
Sbjct: 987 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 11/404 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR N T L + G+ +H L +K G V V + MY+ G
Sbjct: 342 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 401
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A+ +F +MP ++L +WN+ +++ V GR +A+ ++ +G + +TF + L A
Sbjct: 402 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 461
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + GR LHG +V SG N + N LV YGK E+ ++ V + ++ V+W
Sbjct: 462 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 521
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG--LELGRSVHAVA 238
+++ Y ++ + + F T R EGV + SVLSAC + G LE G+ +HA
Sbjct: 522 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYI 580
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V A E + V ++L+ MY KCG + ++ FN + RN++ WNA++ AH GH + L
Sbjct: 581 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 640
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+M S + + LSA ++ +E+G ++ + + +K G + + +
Sbjct: 641 KLVSKMRSFGVSL--DQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAA 697
Query: 359 DLLGRAGLVDRAYEIIKEMP--MRPTISVWGALLNACRVYGKPE 400
D+ + G + E++K +P + ++ W L++A +G E
Sbjct: 698 DMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISALGRHGYFE 738
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 179/373 (47%), Gaps = 5/373 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+ +KSG + V S M G D A+ +FD+M ER+ +WN+ +
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + + F +RR E + T L+ + GR +HG +V+ GFD V V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+ Y A +VF + K+ +SW S++ +V + + + + G
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+S L+AC E GR +H + V + + N +G+ALV MYGK G + ++
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 508
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
+MP R++V WNA+IGGYA D AL++F+ +MR E V NY+T+V VLSAC
Sbjct: 509 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ---TMRVEGVSSNYITVVSVLSACLL 565
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G + + K ++ + G + ++ + + G + + ++ + R I+ W
Sbjct: 566 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT-WN 624
Query: 388 ALLNACRVYGKPE 400
A+L A +G E
Sbjct: 625 AMLAANAHHGHGE 637
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 180/393 (45%), Gaps = 33/393 (8%)
Query: 2 RREC---ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
R+ C I P+ F L A + + G Q+H KSG + DV+V + +Y
Sbjct: 162 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 221
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL + K+F+EMP+RN+ +W + + G P+ ID + +
Sbjct: 222 YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE--------------- 266
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LGRQ+ G +V+SG + ++V N L+ G V A +FD + +++
Sbjct: 267 ----------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 316
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+SW S+ Y QN E ++F RR E +S++LS + + GR +H +
Sbjct: 317 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 376
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + + V + L+ MY G +A + F +MP ++L+ WN+++ + + G + A
Sbjct: 377 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 436
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L M S NYVT L+AC EKG +I + + + G+ +
Sbjct: 437 LGLLCSMIS--SGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNAL 493
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V + G+ G + + ++ +MP R ++ W AL+
Sbjct: 494 VSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 525
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 167/375 (44%), Gaps = 38/375 (10%)
Query: 21 SALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWN 80
S + I TG+ +HAL +K V + +MY+K G A +FD MP RN +WN
Sbjct: 83 SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142
Query: 81 AYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVR 139
+S V G ++ F + G +P + + AC S+ + G Q+HGF+ +
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
SG +V V ++ YG V ++ VF+ + D+N VSW S++V Y E E +
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 262
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
+ KD LGR + VK+ +E + V ++L+ M G
Sbjct: 263 Y----------KD---------------ESLGRQIIGQVVKSGLESKLAVENSLISMLGS 297
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G++ A F++M ER+ + WN+I YA GH + + F M E N T+
Sbjct: 298 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVS 355
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR----AGLVDRAYEIIK 375
+LS + G I + + +K G + CV + L R AG A + K
Sbjct: 356 TLLSVLGHVDHQKWGRGI-HGLVVKMGF----DSVVCVCNTLLRMYAGAGRSVEANLVFK 410
Query: 376 EMPMRPTISVWGALL 390
+MP + IS W +L+
Sbjct: 411 QMPTKDLIS-WNSLM 424
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + F+F A++ L + G+QLH LA+K G HD F+ +A DMYSK G
Sbjct: 646 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 705
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ KM R+L +WN IS G + F + G +P +TF + L A
Sbjct: 706 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 765
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + R G + + C ++D G+ + A+ + + ND+
Sbjct: 766 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 825
Query: 179 SWCSML 184
W S+L
Sbjct: 826 VWRSLL 831
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
GR+VHA+ VK V ++ + L++MY K G ++ A F+ MP RN V WN ++ G
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G + F +M + + P+ + +++AC R+G++ + + K G+
Sbjct: 151 VGLYLEGMEFFRKMCDLGIK--PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 208
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ L G GLV + ++ +EMP R +S W +L+ G+PE
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS-WTSLMVGYSDKGEPE 257
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 355/671 (52%), Gaps = 96/671 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQ----LHALALKSGQIHDVFVGC------- 49
MRR+ P+DFTF + SAL + V +Q +H +K+G +GC
Sbjct: 138 MRRDDFRPDDFTFTSVL---SALVLFVGNEQQCGQMHCAVVKTG------MGCVSSSVLN 188
Query: 50 SAFDMYSKTGLK--------DDADKMFDEMPER--------------------------- 74
+ +Y K + A K+FDEMP+R
Sbjct: 189 ALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA 248
Query: 75 ---NL-ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
NL A WNA IS V G + A+ +R G + D IT+ ++AC++ Q+G
Sbjct: 249 MVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG 308
Query: 131 RQLHGFLVRSGFDGNVSVC----NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+Q+H +++++ + N S C N L+ Y K N+V A+ +F + +N ++W ++L
Sbjct: 309 KQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG 368
Query: 187 YV-------------------------------QNYEEENGCQMFLTARREGVEPKDFMI 215
YV QN + G ++F R +G EP DF
Sbjct: 369 YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAF 428
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+ L+AC+ + LE GR +HA V E ++ VG+A++ MY KCG ++ AE F MP
Sbjct: 429 AGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+LV WN++I GH A+ F++M ++ P+ +T + VL+ACS AG VEKG
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQM--LKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F SM YGI P +HYA +VDL RAG+ A +I MP +P VW ALL CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G +LG AA+ LFKL P + G +VLLSN++A GRW + VRK M+D ++K CS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACS 666
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
WI V+N++H+F D H + L +L EMK GYIPDT F L+D+E E+K +
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+ FG++ +PP +R+ KN+RICGDCH+AFKF+S + RE+IVRD RFH F
Sbjct: 727 STHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 576 WDGYCSCSDYW 586
+G CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 88/365 (24%)
Query: 118 LNACS--DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID- 174
L CS D + L R +H ++ SGF N L++ Y K + V A+ +F+ I +
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP 77
Query: 175 --------------------------------KNDVSWCSMLVVYVQNYEEENGCQMFLT 202
++ V + +M+ Y N + + ++F
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKA---CVEGNIFVGSALVDMYG 258
RR+ P DF +SVLSA G E +H VK CV ++ +AL+ +Y
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYV 195
Query: 259 K--------CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT----- 305
K C ++ A F++MP+R+ + W +I GY + A FE M
Sbjct: 196 KRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGA 255
Query: 306 -----------------------SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSM 341
MR + + +T ++SAC+ G+ + G K ++
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG-KQMHAY 314
Query: 342 TLKYGIKPGAEHYAC------VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
LK + P H C ++ L + VD A +I MP+R I+ W A+L+
Sbjct: 315 ILKNELNPN--HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT-WNAILSGYVN 371
Query: 396 YGKPE 400
G+ E
Sbjct: 372 AGRME 376
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 341/587 (58%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN FT+P + + ++L G+Q+H +K+G +V+V DMY+K G
Sbjct: 454 MQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQ 513
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++ +PE ++ +W A I+ V A+ F + G + D I F + ++A
Sbjct: 514 LALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISA 573
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H +GF ++S+ N L+ Y +C + A + F+ I DKN++SW
Sbjct: 574 CAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Q+ E Q+F+ R E F S +SA A +A ++ G+ +H++ +K
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+ +Y K GSI DA FN M ERN++ WNA+I GY+ G AL
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM C +PN+VT V VLSACS G V++G+ F SM + + P +EHY CVVDL
Sbjct: 754 FEEMKV--CGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDL 811
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +DRA E IKEMP+ +W LL+AC ++ E+G AA +L +L+P DS +
Sbjct: 812 LGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATY 871
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+SN++A + +W D RK MKD G+KK G SWI VKN +H F A D H +I
Sbjct: 872 VLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIY 931
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH-HSEKIALAFGLIAIPPGVPIRI 539
+ L GY+ D+ F+L + E+ + + H HSEK+A+AFGL+++ +PIR+
Sbjct: 932 EYIGHLNRRTSEIGYVQDS-FSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRV 990
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ K++S I R +IVRD +RFH F G CSC D+W
Sbjct: 991 MKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 10/400 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+C+ P+ T L A +++ G QLH+ A+K+G D+ + S D+YSK
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE---PDLITFCAF 117
+ A K F N+ WN + V G+ N D+F R+ E P+ T+ +
Sbjct: 413 VETAHKFFLXTETENIVLWNVML---VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L LG Q+H ++++GF NV VC+ L+D Y K ++ LA + + + +
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ YVQ+ Q+F G++ + +S +SACA I L G+ +HA
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ A ++ + +AL+ +Y +CG IQ+A +AF K+ ++N + WN+++ G A G+ + A
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M +R EA N T +SA + +++G +I +SM LK G E +
Sbjct: 650 LQVFVRM--LRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSL 706
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ L ++G + A+ +M R IS W A++ +G
Sbjct: 707 ISLYAKSGSISDAWREFNDMSERNVIS-WNAMITGYSQHG 745
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P + + AS+ + + G+QLH L +K G + +V +YS++
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F M R+ ++N+ IS V G A++ F ++R +PD IT + L+A
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G QLH +++G ++ + L+D Y KC +V A F +N V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q + ++F + EG+ P F S+L C + L LG +H +K
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N++V S L+DMY K G + A ++PE ++V W A+I GY AL
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM R N + +SAC+ A+ +G +I ++ + G ++ L
Sbjct: 552 FEEM-EYRGIQFDN-IGFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSINNALISL 608
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
R G + AY +++ + IS W +L++ G E
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFE 647
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 193/392 (49%), Gaps = 7/392 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG-KQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E I+PN +TF + KA I KQ+H+ G V D+YSK G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+F+ + +++ TW A IS G + AI F ++ + P + L+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A + L +LG QLH +++ GF VCNGLV Y + ++ A+ +F + ++ VS
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ VQ + ++F +R+ ++P ++S+LSACA + L G +H+ A+
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + +I + +L+D+Y KC ++ A F N+V WN ++ Y G D
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY---GQLDNLSD 446
Query: 300 SFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
SFE M+ E +PN T +L C+ GA+ G +I ++ +K G + + ++
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI-HTHVIKTGFQLNVYVCSVLI 505
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
D+ + G + A I++ +P +S W A++
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVS-WTAMI 536
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 176/372 (47%), Gaps = 14/372 (3%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+LH KSG + + S D Y + G + A K+FDE R++ +WN I V
Sbjct: 79 RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV--- 135
Query: 91 RPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSL-LQLGRQLHGFLVRSGFDGNV 146
K+ F RR E P+ TF L AC + +Q+H GFD +
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N L+D Y K + AK VF+ I K+ V+W +M+ QN EE +F
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ P +++SSVLSA +I ELG +H + +K +V + LV +Y + + A
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISA 315
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F+ M R+ V +N++I G QG +D AL F +M R P+ +T+ +LSAC+
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ--RDCLKPDCITVASLLSACA 373
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
GA+ KGM++ +S +K G+ ++DL + V+ A++ I +W
Sbjct: 374 SVGALHKGMQL-HSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE-NIVLW 431
Query: 387 GALLNACRVYGK 398
+L A YG+
Sbjct: 432 NVMLVA---YGQ 440
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ G + + L C L +LH + +SGFDG + + LVD Y + +
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSV 218
A VFD +++ SW M+ V+V +++ Q+F RR EG+ P + + V
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFV---AQKSNFQVFCLFRRMLAEGITPNGYTFAGV 165
Query: 219 LSAC--ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
L AC IA + VH+ + + V + L+D+Y K G I+ A+ FN + +
Sbjct: 166 LKACVGGDIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W A+I G + G + A+ F +M + E P L VLSA ++ E G +
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHA--SEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 337 IFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ + + +K+G +E Y C +V L R+ + A I M R +S
Sbjct: 283 L-HCLVIKWGFH--SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 5/184 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L C L +H K+ +G + +LVD Y + G A F++ R+
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMK 336
+ WN +I + Q F M + E + PN T VL AC +K
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLA---EGITPNGYTFAGVLKACVGGDIAFNYVK 180
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+S T YG ++DL + G ++ A ++ + M+ ++ W A+++
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT-WVAMISGLSQN 239
Query: 397 GKPE 400
G E
Sbjct: 240 GLEE 243
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 332/561 (59%), Gaps = 6/561 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H+ ++K G ++FV D+Y++ G D K+FD M R+L +WN+ I L
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVS 147
+P AI F +R + +PD +T + + S ++ R + GF +R G F +++
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ N +V Y K V A+ VF+ + + + +SW +++ Y QN +M+ EG
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 208 -VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ SVL AC++ L G +H +K + ++FV ++L DMYGKCG ++DA
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSAC 325
F ++P N V WN +I + GH + A+ F+EM E V P+++T V +LSAC
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD---EGVKPDHITFVTLLSAC 562
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S +G V++G F M YGI P +HY C+VD+ GRAG ++ A + IK M ++P S+
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL+ACRV+G +LG+IA+++LF+++P G HVLLSNM+A+ G+WE D +R
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G++K G S + V N++ +F + +H E+ LT L+ ++K GY+PD F L D
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQD 742
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
VE++EK + HSE++A+AF LIA P IRI KNLR+CGDCHS KFIS I RE+I
Sbjct: 743 VEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREII 802
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+NRFH F +G CSC DYW
Sbjct: 803 VRDSNRFHHFKNGVCSCGDYW 823
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 17/427 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P+ TFP + KA + + G ++H LALK G + DV+V S +YS+ +A
Sbjct: 149 LTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FDEMP R++ +WNA IS G K A+ LR D +T + L+AC++
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 261
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
G +H + ++ G + + V N L+D Y + + + VFD + ++ +SW S++
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVE 244
Y N + +F R ++P + S+ S +++ + RSV + K
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I +G+A+V MY K G + A FN +P +++ WN II GYA G A A+ + M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E N T V VL ACS+AGA+ +GMK+ + LK G+ + D+ G+
Sbjct: 442 EE-EGEIAANQGTWVSVLPACSQAGALRQGMKL-HGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVL 422
G ++ A + ++P ++ W L+ +G E A LFK LD +H+
Sbjct: 500 GRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGE----KAVMLFKEMLDEGVKPDHIT 554
Query: 423 LSNMFAA 429
+ +A
Sbjct: 555 FVTLLSA 561
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 180/383 (46%), Gaps = 26/383 (6%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
LF+ + L + K LHA + S QI +V + ++Y G A FD + R+
Sbjct: 60 LFRYCTNLQ---SAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 76 LATWNAYISNAVLGGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
+ WN IS G I F + + +G PD TF + L AC + G ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIH 173
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
++ GF +V V L+ Y + VG A+++FD + ++ SW +M+ Y Q+ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 195 NGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+ G+ D + S+LSAC G ++H+ ++K +E +FV + L
Sbjct: 234 EALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+D+Y + G ++D + F++M R+L+ WN+II Y A+S F+EM R + P
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--P 346
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG-----IKPGAEHYACVVDLLGRAGLVD 368
+ +TL+ + S S+ G + + + TL+ G I G VV + + GLVD
Sbjct: 347 DCLTLISLASILSQLGDI-RACRSVQGFTLRKGWFLEDITIG----NAVVVMYAKLGLVD 401
Query: 369 RAYEIIKEMPMRPTISVWGALLN 391
A + +P IS W +++
Sbjct: 402 SARAVFNWLPNTDVIS-WNTIIS 423
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 143/279 (51%), Gaps = 16/279 (5%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
C+ LQ + LH LV S NV + LV+ Y V LA+ FD I +++ +W M
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 184 LVVYVQ--NYEEENGC-QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ Y + N E C +F+ + G+ P SVL AC + G +H +A+K
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLS--SGLTPDYRTFPSVLKACRTVID---GNKIHCLALK 178
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+++V ++L+ +Y + ++ +A I F++MP R++ WNA+I GY G+A AL+
Sbjct: 179 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ +M + VT+V +LSAC+ AG +G+ I +S ++K+G++ ++DL
Sbjct: 239 SNGLRAM------DSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDL 291
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
G + ++ M +R IS W +++ A + +P
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELNEQP 329
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I+ N T+ + A S G +LH LK+G DVFV S DMY K G +DA
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F ++P N WN I+ G + A+ F + G +PD ITF L+ACS
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 126 LLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS-WCSM 183
L+ G+ + G ++ +VD YG+ ++ A + + D S W ++
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 184 L 184
L
Sbjct: 627 L 627
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ G E K+ I V + L+ + +HA V + N+ + + LV++Y G++
Sbjct: 46 KNGNESKE--IDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVA 103
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F+ + R++ WN +I GY G++ + F + + P+Y T VL A
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCF-SLFMLSSGLTPDYRTFPSVLKA 162
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C V G KI + + LK+G A ++ L R V A + EMP+R S
Sbjct: 163 CR---TVIDGNKI-HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 385 VWGALLN 391
W A+++
Sbjct: 219 -WNAMIS 224
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 333/582 (57%), Gaps = 7/582 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SPN FTFP FK+ ++L +P+ G QLH +K+G + FV S MY K A K
Sbjct: 53 SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARK 112
Query: 67 MFDE-MPERNLAT-WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+FDE RNLA +NA I+ L R +A+ F +R+ G + +T + C+
Sbjct: 113 VFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGP 172
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L G LH VR G DG++SV N L+ Y +C V A+ +FDG+ +K ++W +M+
Sbjct: 173 IHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMI 232
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN + ++ G+ P + VLS+CA + GR V +
Sbjct: 233 SGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFG 292
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
N F+ +AL++MY +CG++ A F+ M E+N++ W AII GY G ++A+ F+EM
Sbjct: 293 FNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEM 352
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
S + +P+ V VLSACS AG EKG+ F +M YG++PG EHY+CVVDLLGRA
Sbjct: 353 IS--SDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRA 410
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G ++ A ++I M + P +VWGALL AC+++ EL +A + + + +P + G +VLLS
Sbjct: 411 GRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLS 470
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N+F+ G E VR M++ +KK GCS++ + RIH+F A D +H + EI ML
Sbjct: 471 NIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLD 530
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L + +K G D + + EE +T +G HSEK+A+AFGLI PG I + KNLR
Sbjct: 531 GLEDIIKRRGGSNDND---QESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLR 587
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CGDCH K +S IV R+++VRD RFH F +G CSC DYW
Sbjct: 588 VCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 8/344 (2%)
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+ A+WNA + + A++ + + +G P+ TF +C+ SL G Q
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC--SMLVVYVQN 190
LHG ++++G + V L+ Y KC+ + A+ VFD +++ C +++ Y N
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F R+EGV + ++ CA L G S+HA +V+ ++G++ VG
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ L+ MY +CGS+ A F+ MPE+ L+ WNA+I GYA G A L + +M
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI- 256
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK-YGIKPGAEHYACVVDLLGRAGLVDR 369
VP+ VTLV VLS+C+ GA G ++ + L +G P ++ ++++ R G + +
Sbjct: 257 -VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVK 313
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
A I M + IS W A++ ++G+ EL D + D
Sbjct: 314 ARAIFDGMTEKNVIS-WTAIIAGYGMHGQGELAVQLFDEMISSD 356
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ SW + L + + ++ G P F +CA ++ G
Sbjct: 17 LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGS 76
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK-MPERNL-VCWNAIIGGYAH 290
+H +K E FV ++L+ MY KC +I A F++ RNL VC+NA+I GY+
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 291 QGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKI-FYSMTLKYGIK 348
A+ F + MR E V N VT++ ++ C AG + G ++ ++++G+
Sbjct: 137 NSRFSDAVLLFRQ---MRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRFGLD 191
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
C++ + R G VD A ++ MP + I+ W A+++
Sbjct: 192 GDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLIT-WNAMISG 234
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ T + + + L G+++ SG + F+ + +MY++ G A
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKAR 315
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M E+N+ +W A I+ + G+ + A+ F + + PD F + L+ACS
Sbjct: 316 AIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375
Query: 126 LLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L + G + R G + +VD G+ + A+ + + ++ + W ++
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGAL 435
Query: 184 L 184
L
Sbjct: 436 L 436
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 324/567 (57%), Gaps = 37/567 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G D A + D M E+ + WNA IS V G A++ F + G + D T+
Sbjct: 235 YVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTY 294
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRS----GFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
+ L+AC++ G+Q+H +++R+ D ++SV N L Y KC +V A+ VF+
Sbjct: 295 TSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFN 354
Query: 171 GIIDKNDVSWCSMLVVYV-------------------------------QNYEEENGCQM 199
+ K+ VSW ++L YV QN E ++
Sbjct: 355 QMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKL 414
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F + EG EP D+ + + ACA +A L GR +HA V+ + ++ G+AL+ MY K
Sbjct: 415 FNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAK 474
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CG ++ A F MP + V WNA+I GH AL FE M ++ + +P+ +T +
Sbjct: 475 CGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELM--LKEDILPDRITFL 532
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
VLS CS AG VE+G + F SM+ YGI PG +HYA ++DLL RAG A ++I+ MP+
Sbjct: 533 TVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPV 592
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
P +W ALL CR++G +LG AA+ LF+L P G +VLLSNM+A GRW++ V
Sbjct: 593 EPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKV 652
Query: 440 RKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDT 499
RK M+D G+KK GCSWI V+N++H+F D H + L +L +M+ GYIPDT
Sbjct: 653 RKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDT 712
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
F L+D+E E+K + HSEK+A+ FGL+ +P G +R+ KNLRICGDCH+AFKF+S +
Sbjct: 713 KFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKV 772
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
V RE++VRD RFH F +G CSC +YW
Sbjct: 773 VEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 161/359 (44%), Gaps = 66/359 (18%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFIN 101
D+ + +S G + A ++F P R+ +NA I+ AI+ F +
Sbjct: 80 DIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRD 139
Query: 102 LRRTGGEPDLITFCAFLNACS-------DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
L R G PD TF + L A + C +Q+H +V+SG SV N L+
Sbjct: 140 LLRNGFRPDNFTFTSVLGALALIVEDEKQC------QQIHCAVVKSGSGFVTSVLNALLS 193
Query: 155 FYGKC---------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE----------- 194
+ KC + + A+ +FD + +++++SW +M+ YV+N E +
Sbjct: 194 VFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTE 253
Query: 195 --------------------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+MF G++ +F +SVLSACA G+ V
Sbjct: 254 KLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQV 313
Query: 235 HAVAVKA----CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
HA ++ ++ ++ V +AL +Y KCG + +A FN+MP ++LV WNAI+ GY +
Sbjct: 314 HAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVN 373
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G D A S FEEM N +T ++S ++ G E+ +K+F M + G +P
Sbjct: 374 AGRIDEAKSFFEEMPER------NLLTWTVMISGLAQNGFGEESLKLFNRMKSE-GFEP 425
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 178/452 (39%), Gaps = 112/452 (24%)
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQ--LGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
N+RR + + A L C + + + R +H ++ SGF + N L+D Y K
Sbjct: 8 NVRRLANQ-----YAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCK 62
Query: 159 CNEVGLAKVVFDGIID---------------------------------KNDVSWCSMLV 185
+++ A +FD I ++ V + +M+
Sbjct: 63 SSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMIT 122
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
Y N + ++F R G P +F +SVL A A I E + +H VK+
Sbjct: 123 GYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKS--- 179
Query: 245 GNIFVGS---ALVDMYGKC----------------------------------------G 261
G+ FV S AL+ ++ KC G
Sbjct: 180 GSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNG 239
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+ A + M E+ +V WNA+I GY H G AL F +M + + + T V
Sbjct: 240 ELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW--DEFTYTSV 297
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG----RAGLVDRAYEIIKEM 377
LSAC+ AG G ++ ++ L+ +P + V + L + G VD A ++ +M
Sbjct: 298 LSACANAGFFLHGKQV-HAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQM 356
Query: 378 PMRPTISVWGALLNACRVYGKPELGRI-AADNLFKLDP--NDSGNHVLLSNMFAATGRWE 434
P++ +S W A+L+ G GRI A + F+ P N V++S + A G E
Sbjct: 357 PVKDLVS-WNAILS-----GYVNAGRIDEAKSFFEEMPERNLLTWTVMISGL-AQNGFGE 409
Query: 435 EADLVRKEMKDVGIKK------GA--GCSWIS 458
E+ + MK G + GA C+W++
Sbjct: 410 ESLKLFNRMKSEGFEPCDYAFAGAIIACAWLA 441
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P D+ F A + L + G+QLHA ++ G + G + MY+K G+
Sbjct: 418 MKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGV 477
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F MP + +WNA I+ G A++ F + + PD ITF L+
Sbjct: 478 VEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLST 537
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
CS L++ G + F SG G +C G
Sbjct: 538 CSHAGLVEEGHRY--FKSMSGLYG---ICPG 563
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/610 (36%), Positives = 345/610 (56%), Gaps = 55/610 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS----- 84
K++H+ A+++G D FV + D Y+K G +DA K+F+ M +++ +WNA ++
Sbjct: 279 KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQS 338
Query: 85 -------------------------NAVLGGR-----PKNAIDAFINLRRTGGEPDLITF 114
+AV+ G + A+DAF + G EP+ +T
Sbjct: 339 GNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTI 398
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGF------------DGNVSVCNGLVDFYGKCNEV 162
+ L+AC+ L G ++H + ++ ++ V N L+D Y KC
Sbjct: 399 ISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSF 458
Query: 163 GLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSV 218
A+ +FD I ++N V+W M+ Y Q + + ++F + ++ V P + IS +
Sbjct: 459 KAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCI 518
Query: 219 LSACARIAGLELGRSVHAVAVKAC-VEGNI-FVGSALVDMYGKCGSIQDAEIAFNKMPER 276
L ACA +A L +G+ +HA + E ++ FV + L+DMY KCG + A F+ MP+R
Sbjct: 519 LMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
N V W +++ GY G AL F++M + VP+ ++ + +L ACS +G V++G+
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKM--QKAGFVPDDISFLVLLYACSHSGMVDQGLN 636
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
F M Y + AEHYACV+DLL R G +D+A++ I+EMPM P+ +W ALL+ACRV+
Sbjct: 637 YFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH 696
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSW 456
EL A + L + + G++ L+SN++A RW++ +R+ MK GIKK GCSW
Sbjct: 697 SNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSW 756
Query: 457 ISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVG 516
+ K F D SH + EI ++L +L +K GY+P+TNFAL+DV++EEK +
Sbjct: 757 VQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLS 816
Query: 517 HHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFW 576
HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV E+IVRD++RFH F
Sbjct: 817 EHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFK 876
Query: 577 DGYCSCSDYW 586
+G CSC YW
Sbjct: 877 NGSCSCGGYW 886
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 228/487 (46%), Gaps = 68/487 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ FT P KA L G+ LH L +G +VFV + MYS+ G
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGS 199
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
+DA +FDE+ + ++ +WN+ ++ V G P+ A++ F ++ + T D+
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC+ L +++H + +R+G + VCN L+D Y KC + A VF+
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 172 IIDKNDVSWCSMLVVYVQ------------NYEEEN------------------GCQM-- 199
+ K+ VSW +M+ Y Q N +EN GC
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379
Query: 200 ---FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV------------E 244
F +G EP I S+LSACA + L G +HA ++K C+
Sbjct: 380 LDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ V +AL+DMY KC S + A F+ +P ERN+V W +IGGYA G ++ AL F
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLL 361
EM S PN T+ C+L AC+ A+ G +I +T + +P A C++D+
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD-----PND 416
+ G VD A + MP R +S W ++++ ++G+ G+ A D K+ P+D
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKMQKAGFVPDD 615
Query: 417 SGNHVLL 423
VLL
Sbjct: 616 ISFLVLL 622
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 174/408 (42%), Gaps = 60/408 (14%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G Y G DA + + + WN + + G AI + R G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
+PD T L AC + GR LHG + +GF+ NV VCN LV Y +C + A
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 167 VVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMF-----LTARREGVEPKDFM-ISS 217
+VFD I K + +SW S++ +V+ ++F + + E D + I +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L ACA + L + +H+ A++ + FV +AL+D Y KCGS+ DA FN M ++
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 278 LVCWN-----------------------------------AIIGGYAHQGHADMALSSFE 302
+V WN A+I GYA +G + AL +F+
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH--------- 353
+M E PN VT++ +LSAC+ GA+ +GM+I ++ +LK +
Sbjct: 385 QMILDGSE--PNSVTIISLLSACASLGALSQGMEI-HAYSLKKCLLSLDNDFGGDGDGED 441
Query: 354 ---YACVVDLLGRAGLVDRAYEIIKEMPMRP-TISVWGALLNACRVYG 397
Y ++D+ + A I +P R + W ++ YG
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA + + FV DMYSK G D
Sbjct: 508 VAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDT 567
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD MP+RN +W + +S + GR K A+D F +++ G PD I+F L ACS
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 124 CSLLQLGRQLHGF-LVRSGFDGNVSVCNG--LVDFYGKCNEVGLA-KVVFDGIIDKNDVS 179
++ G L+ F ++R +D S + ++D +C + A K + + ++ + V
Sbjct: 628 SGMVDQG--LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVI 685
Query: 180 WCSML 184
W ++L
Sbjct: 686 WVALL 690
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 332/559 (59%), Gaps = 24/559 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H+LA+KS + + DMYSK G D A ++F++M ERN+ +W + I+
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR AI + + G + D++ + L+AC+ L G+ +H ++ + + N+ V
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+D Y KC + A VF ++ K+ +SW +M+ +
Sbjct: 390 CNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------------GEL 428
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++ VL ACA ++ LE G+ +H ++ + V +ALVD+Y KCG + A +
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P ++LV W +I GY G+ + A+++F EM E P+ V+ + +L ACS +
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE--PDEVSFISILYACSHS 546
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + FY M + I+P EHYAC+VDLL R G + +AYE ++ +P+ P ++WGA
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR Y EL A+ +F+L+P ++G +VLL+N++A +WEE +R+++ G+
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 449 KKGAGCSWISVKNRIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+K GCSWI +K ++++F ++SH + I+++L K+R +MK G+ P T +AL + +
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINAD 726
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E +K + HSEK+A+AFGL+ +PP IR+TKNLR+CGDCH KF+S RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DGYCSC +W
Sbjct: 787 DSNRFHHFKDGYCSCRGFW 805
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 171/336 (50%), Gaps = 25/336 (7%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ +R++ +WN+ IS V G + + + + G + DL T + L C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ L LG+ +H ++S F+ ++ N L+D Y KC ++ A VF+ + ++N VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + ++ +EGV+ I+S+L ACAR L+ G+ VH
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N+FV +AL+DMY KCGS++ A F+ M ++++ WN +IG
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG--------------- 426
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E P+ T+ CVL AC+ A+E+G +I + L+ G +VDL
Sbjct: 427 --------ELKPDSRTMACVLPACASLSALERGKEI-HGYILRNGYSSDRHVANALVDLY 477
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G++ A + +P + +S W ++ ++G
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVS-WTVMIAGYGMHG 512
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 161/374 (43%), Gaps = 67/374 (17%)
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+ + +NA I + G +NA++ +++ E + T+ + L C+ G++
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKS--ELETKTYGSVLQLCAGLKSFTDGKK 120
Query: 133 LHGFLVRS--GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG------------------- 171
+H + + G DG + + LV FY C ++ + VFD
Sbjct: 121 VHSIIKSNSVGVDGALGL--KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 172 --------------------------------IIDKNDVSWCSMLVVYVQNYEEENGCQM 199
+ D++ +SW SM+ YV N E G +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
+ G++ I SVL CA L LG++VH++A+K+ E I + L+DMY K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTL 318
CG + A F KM ERN+V W ++I GY G +D A+ ++M E V + V +
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK---EGVKLDVVAI 355
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKE 376
+L AC+R+G+++ G + + + + C ++D+ + G ++ A +
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKAN---NMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 377 MPMRPTISVWGALL 390
M ++ IS W ++
Sbjct: 413 MVVKDIIS-WNTMI 425
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A ++L GK++H L++G D V + D+Y K G+ A
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P ++L +W I+ + G AI F +R G EPD ++F + L ACS
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 126 LLQLGRQLHGFLVRSGFD 143
LL+ G + +++++ F+
Sbjct: 548 LLEQGWRFF-YIMKNDFN 564
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 57/269 (21%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
ID + + ++ + Q + EN ++ ++ +E K + SVL CA + G+
Sbjct: 62 IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTY--GSVLQLCAGLKSFTDGK 119
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM------------------- 273
VH++ V + +G LV Y CG +++ F+ M
Sbjct: 120 KVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 274 ---------------------PE-----------RNLVCWNAIIGGYAHQGHADMALSSF 301
PE R+++ WN++I GY G + L +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M + + + T++ VL C+ +G + G K +S+ +K + ++D+
Sbjct: 240 KQMMYLGIDV--DLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +D A + ++M R +S W +++
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVS-WTSMI 324
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 324/546 (59%), Gaps = 11/546 (2%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ DV + G +A ++FDEMP+RN+ W + IS + N +D
Sbjct: 168 VKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMN----NKVDVARK 223
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
L + + +T+ A L + + +L + V+ CNG++ +G E
Sbjct: 224 LFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK----PVAACNGMIMGFGLNGE 279
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
VG A+ VFD + +K+D +W +++ +Y + E +F +REGV P I S+LS
Sbjct: 280 VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSV 339
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C +A L+ GR VH+ V++ + +I+V S L+ MY KCG + + F++ +++V W
Sbjct: 340 CGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMW 399
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N+II GYA G + AL F EM S A P+ +T + VLSAC G V++G++IF SM
Sbjct: 400 NSIIAGYAQHGFGEKALEVFHEMFS--SGAAPDEITFIGVLSACGYTGKVKEGLEIFESM 457
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
KY + EHYAC+VDLLGRAG ++ A +I+ MP+ VWGALL+ACR + +L
Sbjct: 458 KSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDL 517
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
IAA L +L+P+ +G ++LLSN++A+ RW++ +RK M+ + K GCSWI V N
Sbjct: 518 AEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDN 577
Query: 462 RIHIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
++H+F + SH + I L KL ++ AGY PD +F ++DV+EE+K+ + HHSE
Sbjct: 578 KVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSE 637
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
K+A+A+GL+ +P G PIR+ KNLR+CGDCHSA K I+ + GRE+I+RD NRFH F DG C
Sbjct: 638 KMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLC 697
Query: 581 SCSDYW 586
SC D+W
Sbjct: 698 SCRDFW 703
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 67/341 (19%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
+++ G D A +FD++ + + +WNA ++ RP A F + E + I++
Sbjct: 26 FARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM----PERNTISW 81
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
NGLV Y K + A+ VFD + +
Sbjct: 82 -----------------------------------NGLVSGYVKNGMISEARKVFDKMPE 106
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N VSW SM+ YVQ + +F + V M+ ++ R+ E R
Sbjct: 107 RNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIED-GRVD--EARRLF 163
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKC--GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+ VK V +G G C G + +A F++MP+RN+V W ++I GYA
Sbjct: 164 DMIPVKDVVASTNMIG-------GLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNN 216
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
D+A FE M N VT +L +R+G + + ++F +M +KP A
Sbjct: 217 KVDVARKLFEVMPD------KNEVTWTAMLKGYTRSGRINEAAELFKAMP----VKPVA- 265
Query: 353 HYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
AC ++ G G V +A + +M + W AL+
Sbjct: 266 --ACNGMIMGFGLNGEVGKARWVFDQMKEKDD-GTWSALIK 303
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 18/283 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G+ +A K+FD+MPERN+ +W + + V G A F + E +++++
Sbjct: 88 YVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM----PEKNVVSW 143
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L + + R+L + + ++ GL G+ +E A+ +FD +
Sbjct: 144 TVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCS-EGRLSE---AREIFDEMPQ 199
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N V+W SM+ Y N + + ++F + M+ + EL +++
Sbjct: 200 RNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM 259
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
V AC + ++ +G G + A F++M E++ W+A+I Y +G
Sbjct: 260 PVKPVAAC--------NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFE 311
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
AL+ F M R PN+ +++ +LS C +++ G ++
Sbjct: 312 LEALALFSLMQ--REGVRPNFPSIISILSVCGSLASLDHGRQV 352
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 126/320 (39%), Gaps = 63/320 (19%)
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
RS F + ++ + ++ + ++ A+ +FD + K SW +++ Y N +
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+F E N + LV Y
Sbjct: 69 LF---------------------------------------DKMPERNTISWNGLVSGYV 89
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
K G I +A F+KMPERN+V W +++ GY +G D A F M N V+
Sbjct: 90 KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPE------KNVVSW 143
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+L G V++ ++F + +K + ++ L G + A EI EMP
Sbjct: 144 TVMLGGLIEDGRVDEARRLFDMIPVKDVVAS-----TNMIGGLCSEGRLSEAREIFDEMP 198
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM---FAATGRWEE 435
R ++ W ++++ + K ++ R LF++ P+ N V + M + +GR E
Sbjct: 199 QRNVVA-WTSMISGYAMNNKVDVAR----KLFEVMPDK--NEVTWTAMLKGYTRSGRINE 251
Query: 436 ADLVRKEMKDVGIKKGAGCS 455
A + K M +K A C+
Sbjct: 252 AAELFKAMP---VKPVAACN 268
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE + PN + + +L G+Q+H+ ++S D++V MY K G
Sbjct: 321 MQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGD 380
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++FD +++ WN+ I+ G + A++ F + +G PD ITF L+A
Sbjct: 381 LVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA 440
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C ++ G ++ + D +VD G+ ++ A + + + ++ + +
Sbjct: 441 CGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAI 500
Query: 179 SWCSML 184
W ++L
Sbjct: 501 VWGALL 506
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/578 (38%), Positives = 338/578 (58%), Gaps = 2/578 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N++ A++ + G+Q H A+K+G +V + MY + D+A K+F
Sbjct: 112 NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVF 171
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D + N+ +N+ I+ + G+ + ++ R G+ D +++ A L C+ +
Sbjct: 172 DNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVV 231
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LG Q+H ++ + NV V + LVD YGKC+ A VF+ + +KN VSW +++ Y
Sbjct: 232 LGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYT 291
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN E+ Q+FL EGV P +F + L++CA +A L+ G ++ A +K G +
Sbjct: 292 QNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLP 351
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +AL++MY K GS++DA F MP R++V WN+II GYAH G A A+ +F +M +
Sbjct: 352 VCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDM--LF 409
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E VP+YVT + VLSAC++ G V++G M + G+KPG EHY C+V LL R G +D
Sbjct: 410 AEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLD 469
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
A I+ + + W +LL++C+VY LG A+ +F+L P D G +VLLSNM+A
Sbjct: 470 EAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYA 529
Query: 429 ATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLRE 488
RW+ VR+ M+++G++K G SWI V + +H+F ++D H +I L +L +
Sbjct: 530 KANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELID 589
Query: 489 EMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGD 548
++K GY+P+ AL+DVE+E+K + +HSEK+ALAFGLI P G IRI KN+RIC D
Sbjct: 590 KIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDD 649
Query: 549 CHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CH A K IS GR ++VRD RFH DG CSC DYW
Sbjct: 650 CHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 198/432 (45%), Gaps = 24/432 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +HA +++ + DV + +Y K G A ++FD MP RN + N +S
Sbjct: 35 GKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + DA LR + + + A + +GRQ HG+ +++G + V
Sbjct: 94 SGRHR---DALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C+ ++ Y +C + A VFD + N ++ SM+ ++ + + + + R
Sbjct: 151 CSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG 210
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +VL CA + LG VH A+K +E N++VGSALVDMYGKC +A
Sbjct: 211 QWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANR 270
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSF--EEMTSMRCEAVPNYVTLVCVLSACS 326
F +PE+N+V W AI+ Y + AL F EM +R PN T L++C+
Sbjct: 271 VFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVR----PNEFTYAVALNSCA 326
Query: 327 RAGAVEKGMKIFYSMTLK---YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
++ G + T+K +G+ P ++++ ++G V+ A + MP R +
Sbjct: 327 GLATLKNG-NALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCRDVV 382
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD----LV 439
S W +++ +G+ A ++ L + ++V + +A + D +
Sbjct: 383 S-WNSIIIGYAHHGRAREAMEAFHDM--LFAEEVPSYVTFIGVLSACAQLGLVDEGFYYL 439
Query: 440 RKEMKDVGIKKG 451
MK+VG+K G
Sbjct: 440 NIMMKEVGVKPG 451
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 13/276 (4%)
Query: 127 LQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+ +H +VR+ FD V N L+ Y KC +GLA+ VFD + +N VS ++
Sbjct: 32 LSLGKAVHARVVRAARFD--VVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + + R ++++SS ++A A + ++GR H A+KA +
Sbjct: 90 GYASSGRHRDALALL---RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +V SA++ MY +C + +A F+ + N+ +N++I G+ +G D + S M
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM- 205
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+R ++V+ V VL C+ V G ++ ++ LK ++ + +VD+ G+
Sbjct: 206 -VRNVGQWDHVSYVAVLGHCASTKEVVLGSQV-HTQALKRRLELNVYVGSALVDMYGKCD 263
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
A + + +P + +S W A++ A Y + EL
Sbjct: 264 FPHEANRVFEVLPEKNIVS-WTAIMTA---YTQNEL 295
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN+FT+ + + L G L A +K+G + V + +MYSK+G
Sbjct: 306 MEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGS 365
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F MP R++ +WN+ I GR + A++AF ++ P +TF L+A
Sbjct: 366 VEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 425
Query: 121 CSDCSLLQLG 130
C+ L+ G
Sbjct: 426 CAQLGLVDEG 435
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 336/616 (54%), Gaps = 32/616 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + T + K SS+ GKQ+H +K G + VG MY+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 61 KDDADKMFDEMPERNLA------------------------------TWNAYISNAVLGG 90
DA K+F + +RN +W A I G
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
K AI+ F ++ G + D F + L AC + G+Q+H ++R+ F ++ V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+D Y KC + AK VFD + KN VSW +M+V Y Q E ++FL +R G++P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ + +SACA ++ LE G H A+ + + + V ++LV +YGKCG I D+ F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N+M R+ V W A++ YA G A + F++M + P+ VTL V+SACSRAG
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK--PDGVTLTGVISACSRAGL 487
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VEKG + F MT +YGI P HY+C++DL R+G ++ A I MP P W LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
+ACR G E+G+ AA++L +LDP+ + LLS+++A+ G+W+ +R+ M++ +KK
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
G SWI K ++H F A D S +I A L +L ++ GY PDT+F +DVEE
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAV 667
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K+ + +HSE++A+AFGLI +P G PIR+ KNLR+C DCH+A K IS + GRE++VRD
Sbjct: 668 KVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAV 727
Query: 571 RFHRFWDGYCSCSDYW 586
RFHRF DG CSC D+W
Sbjct: 728 RFHRFKDGTCSCGDFW 743
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 43/379 (11%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT-GGEPDLIT 113
YSK GL + + F+++P+R+ TWN I L G A+ A+ + R +T
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L S + LG+Q+HG +++ GF+ + V + L+ Y + AK VF G+
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 174 DKN------------------------------DVSWCSMLVVYVQNYEEENGCQMFLTA 203
D+N VSW +M+ QN + + F
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ +G++ + SVL AC + + G+ +HA ++ + +I+VGSAL+DMY KC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A+ F++M ++N+V W A++ GY G A+ A+ F +M R P++ TL +S
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM--QRSGIDPDHYTLGQAIS 379
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPM 379
AC+ ++E+G + F+ I G HY V V L G+ G +D + + EM +
Sbjct: 380 ACANVSSLEEGSQ-FHGK----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 380 RPTISVWGALLNACRVYGK 398
R +S W A+++A +G+
Sbjct: 435 RDAVS-WTAMVSAYAQFGR 452
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 25/313 (7%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N+ N L+ Y K + + F+ + D++ V+W ++ Y + + + T
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 205 RE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
R+ + ++L + + LG+ +H +K E + VGS L+ MY G I
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
DA+ F + +RN V +N+++GG G + AL F M + V+ ++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-------DSVSWAAMIK 243
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI---IKEMPMR 380
++ G ++ ++ F M ++ G+K + V+ G G ++ +I I +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 381 PTISVWGALLN-----ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEE 435
I V AL++ C Y K R+ N+ G + TGR EE
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVG--------YGQTGRAEE 354
Query: 436 ADLVRKEMKDVGI 448
A + +M+ GI
Sbjct: 355 AVKIFLDMQRSGI 367
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 341/587 (58%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN FT+P + + ++L G+Q+H +K+G +V+V DMY+K G
Sbjct: 454 MQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQ 513
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++ +PE ++ +W A I+ V A+ F + G + D I F + ++A
Sbjct: 514 LALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISA 573
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ G+Q+H +GF ++S+ N L+ Y +C + A + F+ I DKN++SW
Sbjct: 574 CAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Q+ E Q+F+ R E F S +SA A +A ++ G+ +H++ +K
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+ +Y K GSI DA FN M ERN++ WNA+I GY+ G AL
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM C +PN+VT V VLSACS G V++G+ F SM + + P +EHY CVVDL
Sbjct: 754 FEEMKV--CGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDL 811
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +DRA E IKEMP+ +W LL+AC ++ E+G AA +L +L+P DS +
Sbjct: 812 LGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATY 871
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+SN++A + +W D RK MKD G+KK G SWI VKN +H F A D H +I
Sbjct: 872 VLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIY 931
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH-HSEKIALAFGLIAIPPGVPIRI 539
+ L GY+ D+ F+L + E+ + + H HSEK+A+AFGL+++ +PIR+
Sbjct: 932 EYIGHLNRRTSEIGYVQDS-FSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRV 990
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ K++S I R +IVRD +RFH F G CSC D+W
Sbjct: 991 MKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 10/400 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+C+ P+ T L A +++ G QLH+ A+K+G D+ + S D+YSK
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE---PDLITFCAF 117
+ A K F N+ WN + V G+ N D+F R+ E P+ T+ +
Sbjct: 413 VETAHKFFLTTETENIVLWNVML---VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L LG Q+H ++++GF NV VC+ L+D Y K ++ LA + + + +
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ YVQ+ Q+F G++ + +S +SACA I L G+ +HA
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ A ++ + +AL+ +Y +CG IQ+A +AF K+ ++N + WN+++ G A G+ + A
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M +R EA N T +SA + +++G +I +SM LK G E +
Sbjct: 650 LQVFVRM--LRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSL 706
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ L ++G + A+ +M R IS W A++ +G
Sbjct: 707 ISLYAKSGSISDAWREFNDMSERNVIS-WNAMITGYSQHG 745
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P + + AS+ + + G+QLH L +K G + +V +YS++
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F M R+ ++N+ IS V G A++ F ++R +PD IT + L+A
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G QLH +++G ++ + L+D Y KC +V A F +N V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV Y Q + ++F + EG+ P F S+L C + L LG +H +K
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N++V S L+DMY K G + A ++PE ++V W A+I GY AL
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM R N + +SAC+ A+ +G +I ++ + G ++ L
Sbjct: 552 FEEM-EYRGIQFDN-IGFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSINNALISL 608
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
R G + AY +++ + IS W +L++ G E
Sbjct: 609 YARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFE 647
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 193/392 (49%), Gaps = 7/392 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG-KQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E I+PN +TF + KA I KQ+H+ G V D+YSK G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+F+ + +++ TW A IS G + AI F ++ + P + L+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A + L +LG QLH +++ GF VCNGLV Y + ++ A+ +F + ++ VS
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ VQ + ++F +R+ ++P ++S+LSACA + L G +H+ A+
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
KA + +I + +L+D+Y KC ++ A F N+V WN ++ Y G D
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY---GQLDNLSD 446
Query: 300 SFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
SFE M+ E +PN T +L C+ GA+ G +I ++ +K G + + ++
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI-HTHVIKTGFQLNVYVCSVLI 505
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
D+ + G + A I++ +P +S W A++
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVS-WTAMI 536
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 176/372 (47%), Gaps = 14/372 (3%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+LH KSG + + S D Y + G + A K+FDE R++ +WN I V
Sbjct: 79 RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV--- 135
Query: 91 RPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSL-LQLGRQLHGFLVRSGFDGNV 146
K+ F RR E P+ TF L AC + +Q+H GFD +
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N L+D Y K + AK VF+ I K+ V+W +M+ QN EE +F
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ P +++SSVLSA +I ELG +H + +K +V + LV +Y + + A
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISA 315
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F+ M R+ V +N++I G QG +D AL F +M R P+ +T+ +LSAC+
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ--RDCLKPDCITVASLLSACA 373
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
GA+ KGM++ +S +K G+ ++DL + V+ A++ I +W
Sbjct: 374 SVGALHKGMQL-HSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETE-NIVLW 431
Query: 387 GALLNACRVYGK 398
+L A YG+
Sbjct: 432 NVMLVA---YGQ 440
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ G + + L C L +LH + +SGFDG + + LVD Y + +
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSV 218
A VFD +++ SW M+ V+V +++ Q+F RR EG+ P + + V
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFV---AQKSNFQVFCLFRRMLAEGITPNGYTFAGV 165
Query: 219 LSAC--ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
L AC IA + VH+ + + V + L+D+Y K G I+ A+ FN + +
Sbjct: 166 LKACVGGDIA-FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W A+I G + G + A+ F +M + E P L VLSA ++ E G +
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMHA--SEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 337 IFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ + + +K+G +E Y C +V L R+ + A I M R +S
Sbjct: 283 L-HCLVIKWGFH--SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 5/184 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L C L +H K+ +G + +LVD Y + G A F++ R+
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMK 336
+ WN +I + Q F M + E + PN T VL AC +K
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLA---EGITPNGYTFAGVLKACVGGDIAFNYVK 180
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+S T YG ++DL + G ++ A ++ + M+ ++ W A+++
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT-WVAMISGLSQN 239
Query: 397 GKPE 400
G E
Sbjct: 240 GLEE 243
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 340/613 (55%), Gaps = 37/613 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD-- 65
PN ++FP L K+ + + G+Q+H LK G D++V S MY++ G +DA
Sbjct: 63 PNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
Query: 66 -----------------------------KMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
K+FDE+ +++ +WNA IS V K A+
Sbjct: 123 FDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEAL 182
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ + ++ +T +PD T ++AC+ ++LGRQLH ++ GF N+ + N L+D Y
Sbjct: 183 ELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY 242
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F G+ K+ +SW +++ + + +F R G P D +
Sbjct: 243 SKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTML 302
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SVL ACA + +++GR +H K V + ++L+DMY KCG I+ A+ F+ M
Sbjct: 303 SVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSML 362
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEK 333
R+L WNA+I G+A G A+ A F+ + MR + P+ +T V +LSACS +G ++
Sbjct: 363 TRSLSSWNAMIFGFAMHGKANAA---FDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDL 419
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G IF SM+ Y I P EHY C++DLLG GL A E+I+ MPM P +W +LL AC
Sbjct: 420 GRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
+++ ELG A NL K++P + G++VLLSN++A GRW++ +R + D GIKK G
Sbjct: 480 KMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPG 539
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + + +H F D H RN EI ML ++ M+ G++PDT+ L ++EEE K
Sbjct: 540 CSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEG 599
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD R H
Sbjct: 600 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLH 659
Query: 574 RFWDGYCSCSDYW 586
DG SC DYW
Sbjct: 660 LLKDGVWSCHDYW 672
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 47/392 (11%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E NL WN L A+ ++ + G P+ +F L +C+
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE---------------------- 161
L G+Q+HG +++ G+D ++ V L+ Y +
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 162 ---------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+ A+ +FD I K+ VSW +M+ YV+ + +++ + V+P +
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+SACA+ +ELGR +H+ NI + + L+D+Y KCG ++ A F
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +++++ WN +IGG+ H AL F+EM +R PN VT++ VL AC+ GA++
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEM--LRSGESPNDVTMLSVLPACAHLGAID 315
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ + LK G+ + ++D+ + G ++ A ++ M R ++S W A++
Sbjct: 316 IGRWIHVYINKRLK-GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR-SLSSWNAMI 373
Query: 391 NACRVYGKPELGRIAADNLFK------LDPND 416
++GK AA +LF +DP+D
Sbjct: 374 FGFAMHGKAN----AAFDLFSKMRKNGIDPDD 401
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 156/337 (46%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+QLH+ G ++ + D+YSK G
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F + ++++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ AK VFD ++ ++
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + + +F R+ G++P D +LSAC+ L+LGR + ++
Sbjct: 368 SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 427
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + + ++D+ G CG ++A+ MP E + V W +++ + ++
Sbjct: 428 SQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVEL 487
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
S + + + E +YV L + + R V K
Sbjct: 488 GESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAK 524
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/557 (40%), Positives = 318/557 (57%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+ HA G +D + MY D A +F+++P WN I
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
GR ++++ + + G +PD F L +C+ S LQ G+ +H LV G ++ V
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y KC ++ A++VFD + ++ VSW SM+ Y N F R GV
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P I SVL AC + L G H+ ++ E +I V +A++DMY KCGS+ A
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++ ++LVCW+A+I Y GH A+ F++M ++ P++VT CVLSACS +G
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQM--VKAGVRPSHVTFTCVLSACSHSG 1034
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E+G F MT ++ I +YAC+VDLLGRAG + A ++I+ MP+ P S+WG+L
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++ +L AD+LF LDP +G HVLLSN++AA RW E + VRK M G
Sbjct: 1095 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGAN 1154
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G S + N++H F D SH + ++ A L +L MK GY+P T+F L+D+EEE
Sbjct: 1155 KIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEE 1214
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
K + +HSE++A+AFGLI PG +RITKNLRICGDCH+A K IS IV R ++VRD
Sbjct: 1215 AKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDM 1274
Query: 570 NRFHRFWDGYCSCSDYW 586
+RFHRF DG CSC DYW
Sbjct: 1275 HRFHRFEDGVCSCGDYW 1291
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 274/503 (54%), Gaps = 1/503 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+C+ + T + A + L G +H L ++ D+ + S ++Y+KTG +
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F +MPE+++ +W+ I+ A++ F + EP+ +T + L AC+
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ G+++H V GF+ + SV L+D Y KC+ A +F + K+ VSW ++
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
L Y QN +F +G++P + +L+A + + + +H V++
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N+FVG++L+++Y KCGS+ DA F M R++V W+++I Y G AL F++
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M PN VT + +LSACS AG VE+G+KIF M Y ++P +EH+ +VDLLGR
Sbjct: 500 MVK-NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGR 558
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
G + +A +II MP+ VWGALL ACR++ E+G AA NLF LDP+ +G ++LL
Sbjct: 559 IGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILL 618
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++A G+W+ +R +K+ G+KK G S + V+ +H F A D H + +I +L
Sbjct: 619 SNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELL 678
Query: 484 TKLREEMKAAGYIPDTNFALYDV 506
KL +M YIPD +F L+D
Sbjct: 679 RKLEAQMGKEVYIPDLDFLLHDT 701
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 192/364 (52%), Gaps = 7/364 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
QLH+ K+G +HD F +Y+K A K+FDE P N+ WN+ + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 91 RPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSV 148
+ + + F + T GE PD T L AC+ +L+LG+ +HGF ++ G ++ V
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREG 207
+ LV+ Y KC ++G A VF+ + V W SM+ Y QN + E +F +
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + SV+SACA++ ++ G VH + ++ +G++ + ++L+++Y K G + A
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAA 261
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+KMPE++++ W+ +I YA+ A+ AL+ F EM R E PN VT+V L AC+
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE--PNSVTVVSALQACAV 319
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ +E+G KI + + + G + ++D+ + D A ++ + +P + +S W
Sbjct: 320 SRNLEEGKKI-HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVS-WV 377
Query: 388 ALLN 391
ALL+
Sbjct: 378 ALLS 381
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 2/339 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ F FP K+ + L GK +H + G +D+FV + DMY+K G
Sbjct: 809 MMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGD 868
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD+M R+L +W + IS G + F +R +G P+ ++ + L A
Sbjct: 869 IEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLA 928
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + L+ G H +++++GF+ ++ V ++D Y KC + LA+ +FD K+ V W
Sbjct: 929 CGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCW 988
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y + +F + GV P + VLSAC+ LE G+ + +
Sbjct: 989 SAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTE 1048
Query: 241 ACVEGNIFVGSA-LVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
V A +VD+ G+ G + +A MP E + W +++G + D+A
Sbjct: 1049 EFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAE 1108
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ + + +V L + +A SR VEK K+
Sbjct: 1109 KIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKM 1147
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH + ++G + L Y KC + A+ VFD N W S L Y +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 192 EEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFV 249
+ E ++F L G P +F I L ACA + LELG+ +H A K + ++FV
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
GSALV++Y KCG + +A F + + V W +++ GY + AL+ F +M M C
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
V + VTLV V+SAC++ V+ G + + + ++ +++L + G
Sbjct: 202 -VVLDPVTLVSVVSACAQLLNVKAGSCV-HGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF------KLDPN 415
A + +MP + IS W ++ AC Y E A NLF + +PN
Sbjct: 260 AANLFSKMPEKDVIS-WSTMI-AC--YANNEAAN-EALNLFHEMIEKRFEPN 306
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ + ASS L I LH ++SG +VFVG S ++YSK G
Sbjct: 399 MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGS 458
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLN 119
DA K+F M R++ W++ I+ + GR A++ F + + + P+ +TF + L+
Sbjct: 459 LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518
Query: 120 ACSDCSLLQLG-----RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
ACS L++ G R +H + +R + +VD G+ ++G A
Sbjct: 519 ACSHAGLVEEGLKIFDRMVHDYQLRP----DSEHFGIMVDLLGRIGQLGKA 565
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 361/653 (55%), Gaps = 70/653 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ FT + + +A G+++H+ +K G V V S +MY+K G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
A +FD M +N++TWNA IS N+++ G +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 95 A--IDAFINLRRTGGEPDL----ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
++A + + EP L T + L+AC++ L +G+Q+H +++R+ + + +V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 149 CNGLVDFYGKCNEVGLAKVV---------------------------------FDGIIDK 175
N L+ Y K V +A+++ F+ + D+
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V YVQN + ++F EG EP + ++++LS + + LE G+ +H
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGH 293
A A+KA V +AL+ MY K G+I A+ F+ +P ++ +V W ++I A G
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGL 491
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A++ FE M S+ + P+++T V VLSAC+ G VE+G K + MT + I+P H
Sbjct: 492 GKEAINLFERMLSVGMK--PDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC++DL GRAGL+ AY I+ MP+ P WG+LL +C+++ +L ++AA+ L +D
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P +SG ++ L+N+++A G+WE A RK MKD G++K G SWI +KN +H F +D H
Sbjct: 610 PGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIH 669
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ EI ++ ++ EE+K G+IPDT L+D+EEE K + +HSEK+A+AFGL+ P
Sbjct: 670 PQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPE 729
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCHSA KFIS +VGRE+IVRD RFH F DG CSC DYW
Sbjct: 730 NTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 207/495 (41%), Gaps = 103/495 (20%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F + + S + P G+ +H +K G V++ + Y+KTG A +FDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 73 ERNLATWNAYIS--------------------------NAVLGGRPK-----NAIDAFIN 101
++ +WN IS A++ G + NAI F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ P T L++C+ L +GR++H F+V+ G V V L++ Y KC +
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--------------------- 200
+AKVVFD + KN +W +++ +Y+Q+ + E F
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 201 ---LTA--------RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
L A ++P +F ++S+LSACA + L +G+ +HA ++A E + V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 250 GSALVDMYGKCGSIQDAEI---------------------------------AFNKMPER 276
G+AL+ MY K G ++ A + FNK+ +R
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W A+I GY G + AL F M + E PN TL +LS S +E G +
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE--PNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I ++ +K G ++ + + G ++ A + + I W +++ A +
Sbjct: 431 I-HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
Query: 397 GKPELGRIAADNLFK 411
G LG+ A NLF+
Sbjct: 490 G---LGK-EAINLFE 500
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L RI GRSVH +K + +++ + L+ Y K GS++ A F++MP ++
Sbjct: 16 ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75
Query: 278 LVCWNAIIGGYAHQGH-------------------------------ADMALSSFEEMTS 306
WN +I GYA QG+ D A+ F +M S
Sbjct: 76 TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R P+ T+ VLS+C+ ++ G KI +S +K G+ ++++ + G
Sbjct: 136 ERVP--PSQFTVSNVLSSCAANQTLDIGRKI-HSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
A + M ++ IS W AL++ G+ EL AA K+ D
Sbjct: 193 PVIAKVVFDRMTVK-NISTWNALISLYMQSGQFEL---AASQFEKMPDRD 238
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 315/543 (58%), Gaps = 3/543 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D ++ M+ K G+ DA ++FDEMPERNL +WN IS V G A F+N+
Sbjct: 9 DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMW 68
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ TF + A + L+ +GRQLH ++ G ++ V L+D Y KC +
Sbjct: 69 EEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIE 128
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ VF+ + +K V W +++ Y + E M+ R GV+ F S ++ CA
Sbjct: 129 DARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICA 188
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
R+A +E + HA ++ +I +ALVD Y K G I+DA F+KM +N++ WNA
Sbjct: 189 RLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNA 248
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+IGGY + G A+ FE+M R PN++T + VLSACS +G E+G +IF SM
Sbjct: 249 LIGGYGNHGRGSEAVELFEQMIQERMN--PNHITFLAVLSACSHSGLSERGWEIFQSMGR 306
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
IKP A HYAC+++L+GR GL+D A +I+ P +PT ++W ALL ACRV ELG+
Sbjct: 307 DNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGK 366
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AA+ L+ ++P+ N+++L N++ + G +EA V +K G++ CSWI VK R
Sbjct: 367 FAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRP 426
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H+F + D H + EI + KL E+ GY+P+ L DV+E+E+ + +HSEK+A
Sbjct: 427 HVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRL-YHSEKLA 485
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+AFGLI+ P P++I + RICGDCH A K I+ + GRE+++RD RFH F G+CSC
Sbjct: 486 IAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCE 545
Query: 584 DYW 586
DYW
Sbjct: 546 DYW 548
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 5/346 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E FTF + +AS+ L + G+QLHA LK G D+FV C+ DMYSK G
Sbjct: 67 MWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGS 126
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+EMPE+ WN I+ L G + A+D + +R +G + D TF +
Sbjct: 127 IEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRI 186
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++ +Q H L+R GF ++ LVDFY K + A+ VFD + KN +SW
Sbjct: 187 CARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISW 246
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAV 239
+++ Y + ++F +E + P +VLSAC+ E G + ++
Sbjct: 247 NALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGR 306
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV-CWNAIIGGYAHQGHADMAL 298
++ + ++++ G+ G + +A P + W A++ + ++
Sbjct: 307 DNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGK 366
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ E++ M + + NY+ L+ + ++ AG +++ + +++ K
Sbjct: 367 FAAEKLYGMEPDKLNNYIVLLNIYNS---AGNLKEAADVVHTLKRK 409
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENG 196
++ +GF+ + + N ++ + KC + A+ +FD + ++N VSW +++ V +
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
++FL E + F + ++ A A + + +GR +HA +K + +IFV AL+DM
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCGSI+DA F +MPE+ V WN II GYA G+++ AL + EM + ++
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKM--DHF 178
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T ++ C+R +VE K ++ +++G +VD + G ++ A + +
Sbjct: 179 TFSMIVRICARLASVEHA-KQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDK 237
Query: 377 MPMRPTISVWGALLNACRVYGK 398
M + IS W AL+ +G+
Sbjct: 238 MASKNVIS-WNALIGGYGNHGR 258
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/591 (39%), Positives = 349/591 (59%), Gaps = 15/591 (2%)
Query: 6 ISPNDFTFPC--------LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
++ + F PC L +S+ + G QLH +KSG V + + YSK
Sbjct: 3 LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
+ L D+ + F++ P+++ TW++ IS P +++ + PD +
Sbjct: 63 SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+C+ S +GR +H +++G+D +V V + LVD Y KC E+ A+ +FD + +N
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W M+ Y Q E E +F A E + D+ SSV+S CA LELGR +H +
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++K+ + + FVGS+LV +Y KCG + A FN++P +NL WNA++ YA H
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 298 LSSFEEM--TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
+ F+ M + M+ PN++T + VL+ACS AG V++G F M + I+P +HYA
Sbjct: 303 IELFKRMKLSGMK----PNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYA 357
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+VD+LGRAG + A E+I MP+ PT SVWGALL +C V+ EL AAD +F+L P
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
SG H+ LSN +AA GR+E+A RK ++D G KK G SW+ +N++H F A + HE+
Sbjct: 418 SSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEK 477
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ EI L +L EEM+ AGYI DT++ L +V+ +EK + +HSE++A+AFGLI P
Sbjct: 478 SKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADR 537
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+CGDCH+A KF+S R +IVRDNNRFHRF DG CSC+DYW
Sbjct: 538 PIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E ++ ND++F + + + G+Q+H L++KS FVG S +YSK G+ +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F+E+P +NL WNA + + I+ F ++ +G +P+ ITF LNACS
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSWCS 182
L+ GR + S + LVD G+ + A +V+ + ID + W +
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 183 MLV 185
+L
Sbjct: 391 LLT 393
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 338/584 (57%), Gaps = 15/584 (2%)
Query: 12 TFP-----CLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDD 63
T+P CL K +S + KQ+ A ++K+ +D+ + + ++ T D
Sbjct: 24 TYPSSLLSCLPKCTSLKEL----KQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDY 79
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F+ +P+ ++ +N+ P AI FI PD TF + L AC
Sbjct: 80 AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
Q G+QLH ++ G + N VC L++ Y CN+V A+ VFD I++ VS+ ++
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y ++ +F + ++P D + SVLS+CA + L+LG+ +H K +
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + V +AL+DMY KCGS+ A F M R+ W+A+I YA G +S FEE
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEE 319
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M R + P+ +T + +L ACS G V++G + FYSM+ YGI PG +HY C+VDLLGR
Sbjct: 320 MA--RAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGR 377
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AGL+ AY+ I E+P++PT +W LL++C +G EL + + + +LD + G++V+L
Sbjct: 378 AGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVIL 437
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+ A G+WE+ D +RK M G K GCS I V N +H F + D H +T + L
Sbjct: 438 SNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRAL 497
Query: 484 TKLREEMKAAGYIPDTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
+L +E+K+ GY+PDT+ ++ D+E+EEK + +HSEK+A++FGL+ PPG IR+ KN
Sbjct: 498 DELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKN 557
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+CGDCHSA K IS ++ RE+I+RD RFH F DG CSC DYW
Sbjct: 558 LRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 7/328 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D+TFP L KA GKQLH LA+K G + +V + +MY+ D A ++
Sbjct: 125 PDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRV 184
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDE+ E + ++NA I+ RP A+ F L+ +P+ +T + L++C+ L
Sbjct: 185 FDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGAL 244
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG+ +H ++ ++G D V V L+D Y KC + A VF+ + ++ +W +M+V Y
Sbjct: 245 DLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAY 304
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVA-VKACVEG 245
+ + ++ MF R V+P + +L AC+ ++ G R ++++ V + G
Sbjct: 305 AMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPG 364
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
G +VD+ G+ G + +A +++P + + W ++ + G+ ++A ++
Sbjct: 365 IKHYG-CMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQI 423
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +YV L + C+RAG E
Sbjct: 424 LELDDSHGGDYVILS---NLCARAGKWE 448
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PND T + + + L GK +H K+G V V + DMY+K G D A
Sbjct: 224 LKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAI 283
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ M R+ W+A I + G+ ++ + F + R +PD ITF L ACS
Sbjct: 284 SVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTG 343
Query: 126 LLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L+ G R + G + +VD G+ + A D + I + W ++
Sbjct: 344 LVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTL 403
Query: 184 L 184
L
Sbjct: 404 L 404
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/545 (40%), Positives = 321/545 (58%), Gaps = 10/545 (1%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ DV + Y++ G A ++F+E P R++ TW A +S V G A F
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ + I++ A L + + G L + N+S N ++ YG+
Sbjct: 289 M----PVKNEISYNAMLAGYVQYKKMVIA----GELFEAMPCRNISSWNTMITGYGQNGG 340
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ A+ +FD + ++ VSW +++ Y QN E MF+ +R+G S LS
Sbjct: 341 IAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALST 400
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA IA LELG+ VH VKA E FVG+AL+ MY KCGS +A F + E+++V W
Sbjct: 401 CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSW 460
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N +I GYA G AL FE M + P+ +T+V VLSACS +G +++G + FYSM
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMK--KAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSM 518
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
Y +KP ++HY C++DLLGRAG ++ A +++ MP P + WGALL A R++G EL
Sbjct: 519 DRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTEL 578
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
G AA+ +FK++P +SG +VLLSN++AA+GRW + +R +M++ G++K G SW+ V+N
Sbjct: 579 GEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQN 638
Query: 462 RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+IH F D H I A L +L +M+ GY+ T L+DVEEEEK + +HSEK
Sbjct: 639 KIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 698
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+AFG++ IP G PIR+ KNLR+C DCH+A K IS IVGR +I+RD++RFH F +G CS
Sbjct: 699 LAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICS 758
Query: 582 CSDYW 586
C DYW
Sbjct: 759 CGDYW 763
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ S N TF C + + GKQ+H +K+G FVG + MY K G
Sbjct: 382 MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGS 441
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A+ +F+ + E+++ +WN I+ G + A+ F ++++ G +PD IT L+A
Sbjct: 442 TDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG----LVDFYGKCNEVGLAKVVFDGI-IDK 175
CS L+ G + + R D NV + ++D G+ + A+ + + D
Sbjct: 502 CSHSGLIDRGTEYFYSMDR---DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDP 558
Query: 176 NDVSWCSML 184
SW ++L
Sbjct: 559 GAASWGALL 567
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 162/406 (39%), Gaps = 66/406 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ A + + G D A ++F+ MP R+ ++NA IS + + A D F +
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM- 103
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E DL ++ L L +L + + +V N ++ Y + V
Sbjct: 104 ---PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNGFVD 156
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ VF+ + +N +SW +L YV N + ++F +
Sbjct: 157 EAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQ-------------------- 196
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ EL + N +G Y K + DA F++MP R+++ WN
Sbjct: 197 --SNWEL------------ISWNCLMGG-----YVKRNMLGDARQLFDRMPVRDVISWNT 237
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I GYA G A F E + + T ++S + G V++ K F M +
Sbjct: 238 MISGYAQVGDLSQAKRLFNE------SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV 291
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
K I + A + + +V A E+ + MP R IS W ++ YG+ G
Sbjct: 292 KNEI----SYNAMLAGYVQYKKMVI-AGELFEAMPCR-NISSWNTMITG---YGQN--GG 340
Query: 404 IA-ADNLFKLDPN-DSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
IA A LF + P D + + + +A G +EEA + EMK G
Sbjct: 341 IAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
D + V+W + +++N ++ ++F + R + MIS L R A L R
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYL----RNAKFSLARD 98
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+ E ++F + ++ Y + + +A F+ MP++++V WNA++ GYA G
Sbjct: 99 L----FDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGF 154
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
D A F +M N ++ +L+A G +++ ++F S + I
Sbjct: 155 VDEAREVFNKMPH------RNSISWNGLLAAYVHNGRLKEARRLFESQSNWELIS----- 203
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKL 412
+ C++ + ++ A ++ MP+R IS W +++ G ++G ++ A LF
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDVIS-WNTMIS-----GYAQVGDLSQAKRLFNE 257
Query: 413 DP 414
P
Sbjct: 258 SP 259
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/622 (37%), Positives = 339/622 (54%), Gaps = 38/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--- 57
MR P+ FP + K+ + + G+ +H ++ G D++ G + +MY+K
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 58 TGLKDDADKMFDEMPER---------------------------------NLATWNAYIS 84
G K +FDEMP+R ++ ++N I+
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G ++A+ + T +PD T + L S+ + G+++HG+++R G D
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 275
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V + + LVD Y K + ++ VF + ++ +SW S++ YVQN ++F
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V+P SSV+ ACA +A L LG+ +H ++ NIF+ SALVDMY KCG+I+
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F++M + V W AII G+A GH A+S FEEM R PN V V VL+A
Sbjct: 396 AARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK--RQGVKPNQVAFVAVLTA 453
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS G V++ F SMT YG+ EHYA V DLLGRAG ++ AY I +M + PT S
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VW LL++C V+ EL A+ +F +D + G +VL+ NM+A+ GRW+E +R M+
Sbjct: 514 VWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMR 573
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
G++K CSWI +KN+ H F + D SH +I L + E+M+ GY+ DT+ L+
Sbjct: 574 KKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLH 633
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DV+EE K + HSE++A+AFG+I PG IR+TKN+RIC DCH A KFIS I RE+
Sbjct: 634 DVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREI 693
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
IVRDN+RFH F G CSC DYW
Sbjct: 694 IVRDNSRFHHFNRGNCSCGDYW 715
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 187/428 (43%), Gaps = 41/428 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+S + L K + + KQLHA +++ + +Y+ L +A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEAL 59
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F + + W + I A+ +F+ +R +G PD F + L +C+
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC----NEVGLAKV-------------- 167
L+ G +HGF+VR G D ++ N L++ Y K +++ + V
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 168 ------------------VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
VF+ + K+ VS+ +++ Y Q+ E+ +M ++
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F +SSVL + + G+ +H ++ ++ ++++GS+LVDMY K I+D+E
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+++ R+ + WN+++ GY G + AL F +M + + + P V V+ AC+
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK--PGAVAFSSVIPACAHLA 357
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ G K + L+ G + +VD+ + G + A +I M + +S W A+
Sbjct: 358 TLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAI 415
Query: 390 LNACRVYG 397
+ ++G
Sbjct: 416 IMGHALHG 423
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 336/545 (61%), Gaps = 14/545 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV V + Y + G D+A ++FDEM RN+ TW +S GR +D L
Sbjct: 175 DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGR----VDVARKLF 230
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEV 162
E + +++ A L + Q GR F + + CN ++ +G E+
Sbjct: 231 EVMPERNEVSWTAMLMGYT-----QSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEM 285
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
A+++F+G+ ++++ +W +M+ V+ + + +F +REGV + SVLS C
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVC 345
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
A +A L+ GR VHA V++ + +++V S L+ MY KCG + A+ FN+ +++V WN
Sbjct: 346 ASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWN 405
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
++I GY+ G + AL+ F +M S + P+ VT + VLSACS +G V++G +IF +M
Sbjct: 406 SMITGYSQHGLGEEALNVFHDMCSSGVQ--PDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
Y ++PG EHYAC+VDLLGRAG VD A E++++MPM P VWGALL ACR + K +L
Sbjct: 464 CTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLA 523
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
+A + L KL+P ++G +VLLS+M+A GRW + +++RK++ IK GCSWI V+ +
Sbjct: 524 EVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIK-FPGCSWIEVEKK 582
Query: 463 IHIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+H+F D+ SH I ML KL ++ AGY PD +F L+DV+EEEK +G+HSE+
Sbjct: 583 VHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSER 642
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+A+GL+ +P G+PIR+ KNLR+CGDCHSA K I+ + GRE+I+RD NRFH F DG CS
Sbjct: 643 LAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCS 702
Query: 582 CSDYW 586
C D+W
Sbjct: 703 CKDFW 707
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 65/346 (18%)
Query: 50 SAFDMYSKTGLKDDADKMFDE--MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG 107
SA Y + G +A K+FD +P+R +A+WNA +S +P++A+ F + +
Sbjct: 24 SAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR-- 81
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
N NG++ Y K V A+
Sbjct: 82 -------------------------------------NTVSFNGMISGYVKNGMVADARK 104
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VFD + ++N VSW SM+ YVQ E ++F R V MI +L
Sbjct: 105 VFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDA 164
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+L E ++ V + ++ Y + G + +A F++M RN+ W ++ G
Sbjct: 165 KKL--------FDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSG 216
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
YA G D+A FE M N V+ +L +++G +++ ++F +M +K+ +
Sbjct: 217 YAKNGRVDVARKLFEVMPE------RNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIV 270
Query: 348 KPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
AC ++ G AG + RA + + M R W A++
Sbjct: 271 -------ACNEMILQFGLAGEMHRARMMFEGMKERDE-GTWNAMIK 308
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G+ DA K+FD MPERN+ +W + + V G + A F + R +++++
Sbjct: 93 YVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR----NVVSW 148
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ S + ++L + + +V V ++ Y + + A+ +FD +
Sbjct: 149 TVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFDEMKV 204
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+N +W +M+ Y +N + ++F + R V ++ S + A EL +
Sbjct: 205 RNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEA-FELFEA 263
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+ + AC E ++ +G G + A + F M ER+ WNA+I + +G
Sbjct: 264 MPVKWIVACNE--------MILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGL 315
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
AL F M R N+ +++ VLS C+ +++ G ++
Sbjct: 316 DLEALGLFARMQ--REGVALNFPSMISVLSVCASLASLDHGRQV 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 156 YGKCNEVGLAKVVFDG--IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
YG+ ++ A+ VFD + + SW +M+ Y ++++ + +F + +
Sbjct: 29 YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNG 88
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
MIS + + + R V V E N+ +++V Y + G +++AE F +M
Sbjct: 89 MISGYV----KNGMVADARKVFDVMP----ERNVVSWTSMVRGYVQEGMVEEAEKLFWEM 140
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
P RN+V W +IGG + D A F+ + V N + C + G +++
Sbjct: 141 PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYC------QVGRLDE 194
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
++F M ++ + +V + G VD A ++ + MP R +S W A+L
Sbjct: 195 ARELFDEMKVR-----NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVS-WTAML--- 245
Query: 394 RVYGKPELGRIA-ADNLFKLDPND---SGNHVLLSNMFAATGRWEEADLVRKEMKD 445
G + GR+ A LF+ P + N ++L F G A ++ + MK+
Sbjct: 246 --MGYTQSGRMKEAFELFEAMPVKWIVACNEMILQ--FGLAGEMHRARMMFEGMKE 297
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE ++ N + + ++L G+Q+HA ++S D++V MY K G
Sbjct: 326 MQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGD 385
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F+ +++ WN+ I+ G + A++ F ++ +G +PD +TF L+A
Sbjct: 386 LVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSA 445
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG------LVDFYGKCNEVGLAKVVFDGI-I 173
CS G+ GF + V G +VD G+ V A + + + +
Sbjct: 446 CSYS-----GKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPM 500
Query: 174 DKNDVSWCSML 184
+ + + W ++L
Sbjct: 501 EPDAIVWGALL 511
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/593 (39%), Positives = 344/593 (58%), Gaps = 13/593 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ CISP++F + + L + G+Q+H A+K G D V MY + G
Sbjct: 472 MRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 531
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI-DAFINLRRTGGEPDLITFCAFLN 119
D K+F+ M E + +WN + P + I F N+ R G P+ +TF L
Sbjct: 532 MSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLA 591
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A S S+L+LG+Q+H +++ G + V N L+ Y K ++G + +F + D+ D +
Sbjct: 592 ALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAI 651
Query: 179 SWCSML--VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW SM+ +Y N +E C + + ++ F I +L+ACA +A LE G +HA
Sbjct: 652 SWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSI--ILNACASVAALERGMELHA 709
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+++ +E ++ V SALVDMY KCG + A FN M +RN WN++I GYA G
Sbjct: 710 FGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRK 769
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ FEEM +R P++VT V VLSACS AG VE+G++ ++ M +GI P EHY+C
Sbjct: 770 AIEIFEEM--LRSRESPDHVTFVSVLSACSHAGLVERGLE-YFEMMPDHGILPQIEHYSC 826
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY---GKPELGRIAADNLFKLD 413
V+DLLGRAG +D+ E I+ MP+ P +W +L ACR +LGR A+ L +++
Sbjct: 827 VIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIE 886
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + N+VL SN AATG WE+ R M+ KK AG SW+++ + +H F A D SH
Sbjct: 887 PQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSH 946
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
EI L L + ++ AGY+P T +ALYD+EEE K + +HSEK+A+AF L
Sbjct: 947 PNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSS 1006
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PIRI KNLR+CGDCH AF++IS ++ R++I+RD+ RFH F DG CSC DYW
Sbjct: 1007 G-PIRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 10/367 (2%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+ LKSG D++VG + +++ GL D+A +F + ++N T N I V
Sbjct: 296 QVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQD 355
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL----LQLGRQLHGFLVRSGF-DGN 145
+ A+ F+ R T + + T+ L+A ++ S+ L++GR +HG ++R+G D
Sbjct: 356 FSEEAVKIFVGTRNTV-DVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLK 414
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
++V NGLV+ Y KC + A +F + + +SW +++ QN E + R+
Sbjct: 415 IAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQ 474
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+ P +F + S LS+CA + L G+ VH AVK ++ + V + LV MYG+CG++ D
Sbjct: 475 SCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSD 534
Query: 266 AEIAFNKMPERNLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
FN M E + V WN ++G A Q + F M MR +PN VT + +L+A
Sbjct: 535 YWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNM--MRGGLIPNKVTFINLLAA 592
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
S +E G ++ ++ +K+G+ ++ ++G + + M R
Sbjct: 593 LSPLSVLELGKQV-HAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAI 651
Query: 385 VWGALLN 391
W ++++
Sbjct: 652 SWNSMIS 658
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 180/388 (46%), Gaps = 22/388 (5%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+ LH +K G HD+F+ + Y+K A ++FDEMPERN +W +S VL
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 90 GRPKNAIDAFINLRR---TGGEPDLITFCAFLNACSDCSLLQLG--RQLHGFLVRSGFDG 144
G + A F + R G P TF L AC D +LG Q+HG + ++ +
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 145 NVSVCNGLVDFYGKCNEVG---LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
N +VCN L+ YG C VG LA+ VFDG ++ ++W +++ VY + + + +F
Sbjct: 201 NTTVCNALISMYGSCT-VGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFK 259
Query: 202 TARREG----VEPKDFMISSVLS-ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+R + P + S+++ A + V +K+ +++VGSALV
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
+ + G +A+ F + ++N V N +I G Q ++ A+ F R N
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF---VGTRNTVDVNAD 376
Query: 317 TLVCVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYAC-VVDLLGRAGLVDRAYE 372
T V +LSA + E+G++I + L+ G+ + +V++ + G ++ A +
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK 436
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPE 400
I + M IS W +++A G E
Sbjct: 437 IFQLMEATDRIS-WNTIISALDQNGNCE 463
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 347/624 (55%), Gaps = 55/624 (8%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
+ A ++L K++H+ A+++G D FV + D Y+K G DA +F+ M ++
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRT------------------------------ 105
+ +WNA ++ G+ A + F N+R+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 106 -----GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF------------DGNVSV 148
G EP+ +T + L+AC+ L G + H + ++ ++ V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMF--LTAR 204
N L+D Y KC A+ +F+ I ++N V+W M+ Y Q + + ++F + ++
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNI-FVGSALVDMYGKCGS 262
V P + IS +L ACA ++ L +G+ +HA + E ++ FV + L+DMY KCG
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F+ MP+RN V W +++ GY G AL F++M + VP+ ++ + +L
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM--QKAGFVPDDISFLVLL 622
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
ACS +G V++G+ F M YG+ A+HYACV+DLL R+G +D+A++ I+EMPM P+
Sbjct: 623 YACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPS 682
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
++W ALL+ACRV+ EL A + L + + G++ L+SN++A RW++ +R+
Sbjct: 683 AAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQL 742
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
MK GIKK GCSW+ K F D SH + EI ++L +L +K GY+P+TNFA
Sbjct: 743 MKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFA 802
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
L+DV++EEK + HSEK+ALA+GL+ PG PIRITKNLR+CGDCHSAF +IS IV
Sbjct: 803 LHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDH 862
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
E+IVRD++RFH F +G CSC YW
Sbjct: 863 EIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 226/487 (46%), Gaps = 68/487 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ FT P KA L +G H L +G +VFV + MYS++G
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGS 199
Query: 61 KDDADKMFDEMPER---NLATWNAYISNAVLGGRPKNAIDAF------INLRRTGGEPDL 111
+DA +FDE+ + ++ +WN+ ++ V G P+ A+D F ++ + T D+
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
I+ L AC+ L +++H + +R+G + VCN L+D Y KC + A VF+
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE------------------------- 206
+ K+ VSW +M+ Y Q+ + ++F R+E
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379
Query: 207 ----------GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV------------E 244
G EP I S+LSACA + L G HA ++K C+
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ V +AL+DMY KC S + A FN +P ERN+V W +IGGYA G ++ AL F
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFS 499
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLL 361
EM S PN T+ C+L AC+ ++ G +I +T + + A C++D+
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMY 559
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD-----PND 416
+ G VD A + MP R +S W ++++ ++G+ G+ A D K+ P+D
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKMQKAGFVPDD 615
Query: 417 SGNHVLL 423
VLL
Sbjct: 616 ISFLVLL 622
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G Y G DA + + + WN + + GR AI + R G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
+PD T L AC + + G HG + +GF+ NV VCN LV Y + + A
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 167 VVFDGIIDK---NDVSWCSMLVVYVQNYEEENGCQMF-----LTARREGVEPKDFM-ISS 217
+VFD I K + +SW S++ +V+ +F + + E D + I +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L ACA + L + +H+ A++ + FV +AL+D Y KCGS++DA FN M ++
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 278 LVCWN-----------------------------------AIIGGYAHQGHADMALSSFE 302
+V WN A+I GYA +G+ AL +F+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+M E PN VT++ +LSAC+ GA+ +GM+
Sbjct: 385 QMILYGSE--PNSVTIISLLSACASLGALSQGME 416
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 41/350 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH------------DVFVGCSAFDMY 55
PN T L A ++L G + HA +LK + D+ V + DMY
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452
Query: 56 SKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINL--RRTGGEPDL 111
SK A +F+ +P ERN+ TW I G +A+ F + + P+
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVS-VCNGLVDFYGKCNEVGLAKVVF 169
T L AC+ S L++G+Q+H ++ R ++ +V V N L+D Y KC +V A+ VF
Sbjct: 513 YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVF 572
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + +N+VSW SM+ Y + + +F ++ G P D +L AC+ ++
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632
Query: 230 LG-------RSVHAVAVK----ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERN 277
G RS + V ACV +D+ + G + A +MP E +
Sbjct: 633 QGLDYFDIMRSDYGVIASAQHYACV----------IDLLARSGRLDKAWKTIQEMPMEPS 682
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
W A++ + ++A + ++ SM+ E +Y TL+ + A +R
Sbjct: 683 AAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSY-TLISNIYATAR 731
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
S+ G+V Y C A V + ++ V W ++ +++ + + R
Sbjct: 84 SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F + L AC + G + H + E N+FV +ALV MY + GS++DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203
Query: 267 EIAFNKMPER---NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN----YVTLV 319
+ F+++ + +++ WN+I+ + + AL F EMT++ E N +++V
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPG--AEHYAC--VVDLLGRAGLVDRAYEIIK 375
+L AC+ A+ + +I Y I+ G A+ + C ++D + G + A +
Sbjct: 264 NILPACASLKALPQTKEIH-----SYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRI-AADNLFK 411
M + +S W A+ V G + G+ AA LFK
Sbjct: 319 VMEFKDVVS-WNAM-----VTGYTQSGKFGAAFELFK 349
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKDD 63
++PN +T C+ A + L GKQ+HA + + FV DMYSK G D
Sbjct: 508 VAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDT 567
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD MP+RN +W + +S + GR K A+D F +++ G PD I+F L ACS
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 124 CSLLQLG 130
++ G
Sbjct: 628 SGMVDQG 634
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 333/575 (57%), Gaps = 3/575 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L A L K++ + SG D ++ M+ K G+ DA ++FDEM
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PE+N+ +WN I V G A F+ + + + F + A + L+ GR
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH +++G G+V V L+D Y KC + A+ VFD + +K V W S++ Y +
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E M+ R GV+ +F S ++ CAR+A LE + HA V+ +I +
Sbjct: 313 YSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANT 372
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD+Y K G I+DA+ F+ MP +N++ WNA+I GY + G A+ FE M +
Sbjct: 373 ALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERM--LHEGM 430
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
VPN+VT + VLSACS +G ++G +IF SM+ + IKP A HYAC+++LLGR GL+D A+
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAF 490
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+IK+ P +PT+++W ALL ACRV+ ELG+ AA+ L+ + P N+V+L N++ +G
Sbjct: 491 ALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSG 550
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
R EEA V + +K G++ CSWI +K + + F + D H ++ EI L +L E+
Sbjct: 551 RLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEIS 610
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY+P F L DV+E+E+ + +HSEK+A+AFGLI P++I ++ RICGDCHS
Sbjct: 611 KHGYVPQXKFLLPDVDEQEERVLL-YHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHS 669
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A K I+ + RE++VRD +RFH F DG CSC DYW
Sbjct: 670 AIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 166/317 (52%), Gaps = 5/317 (1%)
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
I V R A++ F L G + D T+ A ++AC ++ +++ +++ SG
Sbjct: 102 IEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSG 161
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
D + + N ++ + KC + A+ +FD + +KN +SW +++ V + ++FL
Sbjct: 162 LDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
+ + M +++ A A + + GR +H+ ++K V G++FV AL+DMY KCG
Sbjct: 222 MMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
SI+DA+ F++MPE+ V WN+II GYA G+++ ALS + EM + + N+ T +
Sbjct: 282 SIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK-IDNF-TFSII 339
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+ C+R ++E K ++ +++G +VDL + G ++ A + MP +
Sbjct: 340 IRICARLASLEHA-KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398
Query: 382 TISVWGALLNACRVYGK 398
IS W AL+ +G+
Sbjct: 399 VIS-WNALIAGYGNHGR 414
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++FTF + + + L KQ HA ++ G D+ + D+YSK G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGR 383
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FD MP +N+ +WNA I+ GR A++ F + G P+ +TF A L+A
Sbjct: 384 IEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSA 443
Query: 121 CSDCSLLQLGRQLHGFLVR 139
CS L G ++ + R
Sbjct: 444 CSYSGLSDRGWEIFESMSR 462
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/558 (41%), Positives = 319/558 (57%), Gaps = 2/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G + LALK G D +V ++SK D A +F + + +L ++NA IS
Sbjct: 223 GMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSC 282
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A+ F L +G T + S L L + GF V+SG SV
Sbjct: 283 NGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSV 342
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L Y + NE+ LA+ +FD +K +W +M+ Y Q+ E +F
Sbjct: 343 STALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEF 402
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P I+S+LSACA++ L G+SVH + +E NI+V +AL+DMY KCG+I +A
Sbjct: 403 TPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ E+N V WN +I GY G+ D AL F EM + + P+ VT + VL ACS A
Sbjct: 463 LFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQ--PSSVTFLSVLYACSHA 520
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V +G +IF++M KY I+P AEHYAC+VD+LGRAG +++A E I++MP+ P +VWG
Sbjct: 521 GLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGT 580
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL AC ++ L R+A++ LF+LDP + G +VLLSN+++ + +A VR+ +K +
Sbjct: 581 LLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNL 640
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K GC+ I V H+F D SH + T I A L +L +M+ GY +T AL+DVEE
Sbjct: 641 SKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEE 700
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK HSEK+A+AFGLI PG IRI KNLR+C DCH+A KFIS I R ++VRD
Sbjct: 701 EEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRD 760
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F DG CSC DYW
Sbjct: 761 ANRFHHFKDGICSCGDYW 778
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 187/398 (46%), Gaps = 9/398 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ +SP++FT+ AS ++ G LHA A+ G ++FV + D+Y K
Sbjct: 97 LKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASALVDLYCKFSR 153
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A K+FD+MP+R+ WN I+ V +++ F ++ G D T L A
Sbjct: 154 VAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPA 213
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VS 179
++ +++G + ++ GF + V GL+ + KC +V A+++F G+I K D VS
Sbjct: 214 VAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLF-GMIRKPDLVS 272
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ +++ + N E E + F G + ++ + L L + V
Sbjct: 273 YNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCV 332
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ V +AL +Y + I A F++ E+ + WNA+I GYA G +MA+S
Sbjct: 333 KSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAIS 392
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+EM M E PN VT+ +LSAC++ GA+ G K + + ++ ++D
Sbjct: 393 LFQEM--MTTEFTPNPVTITSILSACAQLGALSFG-KSVHQLIKSKNLEQNIYVSTALID 449
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G + A ++ + T++ W ++ ++G
Sbjct: 450 MYAKCGNISEASQLFDLTSEKNTVT-WNTMIFGYGLHG 486
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 191/441 (43%), Gaps = 41/441 (9%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+ HA +++G HD+ G A +F +P+ ++ +N I
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKG--FSF 83
Query: 91 RPKNAIDAFIN--LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P + +F L+ T PD T+ ++A D + LG LH V GFD N+ V
Sbjct: 84 SPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDN---LGMCLHAHAVVDGFDSNLFV 140
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y K + V A+ VFD + D++ V W +M+ V+N ++ Q+F +GV
Sbjct: 141 ASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGV 200
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+++VL A A + +++G + +A+K + +V + L+ ++ KC + A +
Sbjct: 201 RLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARL 260
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--------TSMRCEAVP-----NY 315
F + + +LV +NA+I G++ G + A+ F E+ +S +P +
Sbjct: 261 LFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320
Query: 316 VTLVCVLSA-CSRAG-----AVEKGMKIFYSMTLKYGI---------KPGAEHYACVVDL 360
+ L C + C ++G +V + YS + + + + ++
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 361 LGRAGLVDRAYEIIKEM---PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
++GL + A + +EM P ++L+AC G G+ + L K +
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQ 439
Query: 418 GNHV--LLSNMFAATGRWEEA 436
+V L +M+A G EA
Sbjct: 440 NIYVSTALIDMYAKCGNISEA 460
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+PN T + A + L GK +H L +++V + DMY+K G +A +
Sbjct: 403 TPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD E+N TWN I L G A+ F + G +P +TF + L ACS L
Sbjct: 463 LFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGL 522
Query: 127 LQLGRQLHGFLV 138
++ G ++ +V
Sbjct: 523 VREGDEIFHAMV 534
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 322/549 (58%), Gaps = 49/549 (8%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
I DVF + Y++ G+ ++A ++FD MP++N +WNA ++ A++
Sbjct: 321 IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMA-------------AYVQ 367
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG----NVSVCNGLVDFYG 157
R +++ ++L FD NV+ N ++ Y
Sbjct: 368 RR----------------------MMEEAKEL--------FDAMPCRNVASWNTMLTGYA 397
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
+ + A+ +F + K+ VSW +ML Y Q E Q+F R G +
Sbjct: 398 QAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFAC 457
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
VLS CA IA LE G +H+ +KA FVG+AL+ MY KCGS+++A AF +M ER+
Sbjct: 458 VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERD 517
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+V WN +I GYA G AL F+ M + P+ +TLV VL+ACS +G VEKG+
Sbjct: 518 VVSWNTMIAGYARHGFGKEALEVFDTMR--KTSTKPDDITLVGVLAACSHSGLVEKGISY 575
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
FYSM +G+ EHY C++DLLGRAG +D A ++K+MP P ++WGALL A R++
Sbjct: 576 FYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHR 635
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
ELGR AA+ +F+L+P ++G +VLLSN++A++G+W + D +R M + G+KK G SWI
Sbjct: 636 NSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWI 695
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
V+N++H F D+ H +I A L L MK AGY+ T+ L+DVEEEEK + +
Sbjct: 696 EVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKY 755
Query: 518 HSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
HSEK+A+A+G++ IPPG PIR+ KNLR+C DCH+AFK IS I GR +I+RD+NRFH F D
Sbjct: 756 HSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRD 815
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 816 GSCSCGDYW 824
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 50/354 (14%)
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD 110
A + + G DA+++F MP R+ +T+N ++ GR A+ F ++ R PD
Sbjct: 113 AITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PD 168
Query: 111 LITFCAFLNACSDCSLLQLGRQL---------------------HGF--LVRSGFD---- 143
++ L+A S L R L HG L R FD
Sbjct: 169 SFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPE 228
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ NG++ Y + + A+ +FD + + +SW +++ YVQ + E +MF
Sbjct: 229 KDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKM 288
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ V + M+S AR + R + VA ++F +A+V Y + G +
Sbjct: 289 PQRDVVSWNTMVSGY----ARRGDMAEARRLFDVAPIR----DVFTWTAIVSGYAQNGML 340
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
++A+ F+ MP++N V WNA++ Y + + A F+ +M C V ++ T+ L+
Sbjct: 341 EEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFD---AMPCRNVASWNTM---LT 394
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
++AG +++ IF M K + +A ++ + G + ++ KEM
Sbjct: 395 GYAQAGMLDEARAIFGMMPQKDAVS-----WAAMLAAYSQIGFSEETLQLFKEM 443
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F C+ + + G QLH+ +K+G FVG + MY K G ++A F
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAF 510
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER++ +WN I+ G K A++ F +R+T +PD IT L ACS L++
Sbjct: 511 EEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVE 570
Query: 129 LG 130
G
Sbjct: 571 KG 572
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 16/216 (7%)
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN----IFVGSALVDMY 257
+ RR EP+ + S R A + AC+ G + + + +
Sbjct: 58 SGRRHKPEPQFGKPPMLPSRHLRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAH 117
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G + DAE F MP R+ +N ++ GYA G ALS F + P+ +
Sbjct: 118 MRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR------PDSFS 171
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+L A + ++ +F M +K + Y ++ GLV A
Sbjct: 172 YNTLLHALGVSSSLADVRALFDEMPVKDSVS-----YNVMISSHANHGLVSLARHYFDLA 226
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
P + +S W +L A G+ + R D+ + D
Sbjct: 227 PEKDAVS-WNGMLAAYVRNGRIQEARELFDSRTEWD 261
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 107/277 (38%), Gaps = 43/277 (15%)
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
D V N + + + V A+ +F + ++ ++ +ML Y N F +
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGS---------- 251
R P F +++L A + L R++ + VK V N+ + S
Sbjct: 164 IPR----PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLA 219
Query: 252 ----------------ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ Y + G IQ+A F+ E + + WNA++ GY + +
Sbjct: 220 RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIE 279
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A F +M + V+ ++S +R G + + ++F ++ +
Sbjct: 280 EAQKMFNKMPQR------DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFT-----WT 328
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+V + G+++ A + MP + +S W A++ A
Sbjct: 329 AIVSGYAQNGMLEEAKRVFDAMPDKNAVS-WNAMMAA 364
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 337/560 (60%), Gaps = 4/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ + V++ +Y+K A +FDEM ERN+ +W A IS
Sbjct: 29 GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A+ F+ + R+ EP+ TF L++C+ S +LGRQ+H + + ++ ++ V
Sbjct: 89 RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFV 148
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K + A+ VF+ + +++ VS +++ Y Q +E ++F +REG+
Sbjct: 149 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+S+L+A + +A L+ G+ VH+ ++ + + + ++L+DMY KCG++ A
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARK 268
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN MP R ++ WNA++ GY+ G + F+ M + P+ VT + VLS CS
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREEN-KVKPDSVTFLAVLSGCSHG 327
Query: 329 GAVEKGMKIFYSMTLKYG--IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G +KG+++F M + G I+ G EHY CV+DLLGRAG V+ A+E+IK+MP PT ++W
Sbjct: 328 GLEDKGLEMFDEM-MNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIW 386
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
G+LL ACRV+ +G L +++P ++GN+V+LSN++A+ GRWE+ VR+ M +
Sbjct: 387 GSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEK 446
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
+ K G SWI + IH F A D SH R E+ + +L + K +GY+PD + LYDV
Sbjct: 447 AVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDV 506
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+EE+K + HSEK+ALAFGLI+ GVP+R+ KNLRIC DCH+ KF+S + GR+V +
Sbjct: 507 DEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSI 566
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NRFH G CSC DYW
Sbjct: 567 RDKNRFHHVAGGICSCGDYW 586
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 8/307 (2%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G E + LN C + ++ G+++H ++++ + V + L+ Y KC +G A
Sbjct: 5 GPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCA 64
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ VFD + ++N VSW +M+ Y Q +F+ R EP +F ++VLS+C
Sbjct: 65 RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
+G ELGR +H+ K E +IFVGS+L+DMY K G I +A F +PER++V AII
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GYA G + AL F + R NYVT +L+A S A++ G ++ +S L+
Sbjct: 185 SGYAQLGLDEEALELFCRLQ--REGMSSNYVTYASLLTALSGLAALDHGKQV-HSHVLRC 241
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ ++D+ + G ++ A +I MP+R IS W A+L +GK I
Sbjct: 242 ELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVIS-WNAMLVGYSKHGKG----IE 296
Query: 406 ADNLFKL 412
LFKL
Sbjct: 297 VVKLFKL 303
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 162/335 (48%), Gaps = 12/335 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN+FTF + + + G+Q+H+ K + +FVG S DMY+K G
Sbjct: 102 MLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGR 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F+ +PER++ + A IS G + A++ F L+R G + +T+ + L A
Sbjct: 162 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H ++R V + N L+D Y KC + A+ +F+ + + +SW
Sbjct: 222 LSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISW 281
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACAR----IAGLELGRSVH 235
+MLV Y ++ + ++F R E V+P +VLS C+ GLE+ +
Sbjct: 282 NAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
+ +E I ++D+ G+ G +++A KMP E W +++G A + H+
Sbjct: 342 NGGDE--IEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLG--ACRVHS 397
Query: 295 DMALSSFE--EMTSMRCEAVPNYVTLVCVLSACSR 327
+ + F + + E NYV L + ++ R
Sbjct: 398 NTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGR 432
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+G E K + +L+ C + G+ VHA +K C +++ + L+ +Y KC +
Sbjct: 4 QGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC 63
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F++M ERN+V W A+I GY+ +G A AL F +M +R + PN T VLS+C
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQM--LRSDTEPNEFTFATVLSSC 121
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ E G +I +S K + + ++D+ +AG + A + + +P R +S
Sbjct: 122 TGFSGFELGRQI-HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 179
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/612 (37%), Positives = 340/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP + K+ + G+Q+H LK G D++V S MY + G +DA
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
K+FDE+P +++ +WNA IS G K A+
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F ++ +T PD T ++AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC E+ A +F+ + K+ +SW +++ Y + +F R G P D +
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K V + ++L+DMY KCG I+ A FN +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G+A G AD + F M + + P+ +T V +LSACS +G ++ G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ--PDDITFVGLLSACSHSGMLDLG 489
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF +MT Y + P EHY C++DLLG +GL A E+I M M P +W +LL AC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G ELG A+NL K++P + G++VLLSN++A+ GRW E R + D G+KK GC
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 610 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGA 669
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD RFH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 730 FRDGVCSCNDYW 741
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 178/370 (48%), Gaps = 37/370 (10%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F + E NL WN L P +A+ ++ + G P+ TF L +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY---GKCNE------------------- 161
+ G+Q+HG +++ G D ++ V L+ Y G+ +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 162 ---------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+ A+ +FD I K+ VSW +M+ Y + + ++F + V P +
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+SACA+ +ELGR VH N+ + +AL+D+Y KCG ++ A F +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+P ++++ WN +IGGY H AL F+EM +R PN VT++ +L AC+ GA++
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEM--LRSGETPNDVTMLSILPACAHLGAID 384
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK G+ + ++D+ + G ++ A+++ + + ++S W A++
Sbjct: 385 IGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442
Query: 391 NACRVYGKPE 400
++G+ +
Sbjct: 443 FGFAMHGRAD 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 140/305 (45%), Gaps = 34/305 (11%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIID 174
L+ +C LQ R +H +++ G + L++F + A VF I +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N + W +M + + + + ++++ G+ P + VL +CA+ + G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H +K + +++V ++L+ MY + G ++DA F+K P R++V + A+I GYA +G+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 295 DMALSSFEEMT-----------------------------SMRCEAVPNYVTLVCVLSAC 325
+ A F+E+ M+ P+ T+V V+SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+++G++E G ++ + +G + ++DL + G ++ A + + +P + IS
Sbjct: 277 AQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS- 334
Query: 386 WGALL 390
W L+
Sbjct: 335 WNTLI 339
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/575 (38%), Positives = 333/575 (57%), Gaps = 3/575 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L A L K++ + SG D ++ M+ K G+ DA ++FDEM
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PE+N+ +WN I V G A F+ + + + F + A + L+ GR
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH +++G G+V V L+D Y KC + A+ VFD + +K V W S++ Y +
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E M+ R GV+ +F S ++ CAR+A LE + HA V+ +I +
Sbjct: 313 YSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANT 372
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD+Y K G I+DA+ F+ MP +N++ WNA+I GY + G A+ FE M +
Sbjct: 373 ALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERM--LHEGM 430
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
VPN+VT + VLSACS +G ++G +IF SM+ + IKP A HYAC+++LLGR GL+D A+
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAF 490
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+IK+ P +PT+++W ALL ACRV+ ELG+ AA+ L+ + P N+V+L N++ +G
Sbjct: 491 ALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSG 550
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
R EEA V + +K G++ CSWI +K + + F + D H ++ EI L +L E+
Sbjct: 551 RLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEIS 610
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY+P F L DV+E+E+ + +HSEK+A+AFGLI P++I ++ RICGDCHS
Sbjct: 611 KHGYVPQDKFLLPDVDEQEERVLL-YHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHS 669
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A K I+ + RE++VRD +RFH F DG CSC DYW
Sbjct: 670 AIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 5/317 (1%)
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
I V R A++ F L G + D T+ A ++AC ++ +++ +++ SG
Sbjct: 102 IEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSG 161
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
D + + N ++ + KC + A+ +FD + +KN +SW +++ V + ++FL
Sbjct: 162 LDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
++ + M +++ A A + + GR +H+ ++K V G++FV AL+DMY KCG
Sbjct: 222 MMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCG 281
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
SI+DA+ F++MPE+ V WN+II GYA G+++ ALS + EM + + N+ T +
Sbjct: 282 SIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVK-IDNF-TFSII 339
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+ C+R ++E K ++ +++G +VDL + G ++ A + MP +
Sbjct: 340 IRICARLASLEHA-KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398
Query: 382 TISVWGALLNACRVYGK 398
IS W AL+ +G+
Sbjct: 399 VIS-WNALIAGYGNHGR 414
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++FTF + + + L KQ HA ++ G D+ + D+YSK G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGR 383
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FD MP +N+ +WNA I+ GR A++ F + G P+ +TF A L+A
Sbjct: 384 IEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSA 443
Query: 121 CSDCSLLQLGRQLHGFLVR 139
CS L G ++ + R
Sbjct: 444 CSYSGLSDRGWEIFESMSR 462
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 360/653 (55%), Gaps = 70/653 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ FT + + +A G+++H+ +K G V V S +MY+K G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
A +FD M +N++TWNA IS N+++ G +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 95 A--IDAFINLRRTGGEPDL----ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
++A + EP L T + L+AC++ L +G+Q+H +++R+ + + +V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 149 CNGLVDFYGKCNEVGLAKVV---------------------------------FDGIIDK 175
N L+ Y K V +A+++ F+ + D+
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V YVQN + ++F EG EP + ++++LS + + LE G+ +H
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGH 293
A A+KA V +AL+ MY K G+I A+ F+ +P ++ +V W ++I A G
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGL 491
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A++ FE M S+ + P+++T V VLSAC+ G VE+G K + MT + I+P H
Sbjct: 492 GKEAINLFERMLSVGMK--PDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC++DL GRAGL+ AY I+ MP+ P WG+LL +C+++ +L ++AA+ L +D
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P +SG ++ L+N+++A G+WE A RK MKD G++K G SWI +KN +H F +D H
Sbjct: 610 PGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIH 669
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ EI ++ ++ EE+K G+IPDT L+D+EEE K + +HSEK+A+AFGL+ P
Sbjct: 670 PQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPE 729
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCHSA KFIS +VGRE+IVRD RFH F DG CSC DYW
Sbjct: 730 NTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 207/495 (41%), Gaps = 103/495 (20%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F + + S + P G+ +H +K G V++ + Y+KTG A +FDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 73 ERNLATWNAYIS--------------------------NAVLGGRPK-----NAIDAFIN 101
++ +WN IS A++ G + NAI F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ P T L++C+ L +GR++H F+V+ G V V L++ Y KC +
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--------------------- 200
+AKVVFD + KN +W +++ +Y+Q+ + E F
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 201 ---LTA--------RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
L A ++P +F ++S+LSACA + L +G+ +HA ++A E + V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 250 GSALVDMYGKCGSIQDAEI---------------------------------AFNKMPER 276
G+AL+ MY K G ++ A + FNK+ +R
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W A+I GY G + AL F M + E PN TL +LS S +E G +
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE--PNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I ++ +K G ++ + + G ++ A + + I W +++ A +
Sbjct: 431 I-HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489
Query: 397 GKPELGRIAADNLFK 411
G LG+ A NLF+
Sbjct: 490 G---LGK-EAINLFE 500
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L RI GRSVH +K + +++ + L+ Y K GS++ A F++MP ++
Sbjct: 16 ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75
Query: 278 LVCWNAIIGGYAHQGH-------------------------------ADMALSSFEEMTS 306
WN +I GYA QG+ D A+ F +M S
Sbjct: 76 TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R P+ T+ VLS+C+ ++ G KI +S +K G+ ++++ + G
Sbjct: 136 ERVP--PSQFTVSNVLSSCAANQTLDIGRKI-HSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
A + M ++ IS W AL++ G+ EL AA K+ D
Sbjct: 193 PVIAKVVFDRMTVK-NISTWNALISLYMQSGQFEL---AASQFEKMPDRD 238
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/654 (35%), Positives = 348/654 (53%), Gaps = 73/654 (11%)
Query: 4 ECISPNDFTFPCLFKASSALH-IPVTG-KQLHALALKSGQIHDVFVGCSAFDMYSK---T 58
+ + P+D++F L A +H + V+ QLH K G + V + +Y K
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212
Query: 59 GLKDDADKMFDEMPERNLATW-------------------------------NAYISNAV 87
G+ DA K+ DEMPE++ TW NA IS V
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD---- 143
G A + F + PD TF + L+AC++ G+ +HG +R D
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---------YEE- 193
+ V N LV Y K ++ +A +FD + K+ VSW ++L Y+++ ++E
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392
Query: 194 ---------------------ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
E+ ++F R E V+P D+ + ++AC + L+ G+
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+HA V+ E + G+AL+ MY +CG+++DA + F MP + V WNA+I G
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
H AL F++M + P+ ++ + +L+AC+ AG V+ G + F SM +GI PG +
Sbjct: 513 HGREALELFDQMVAQGI--YPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYA ++DLLGRAG + A ++IK MP PT ++W A+L+ CR+ G ELG AAD LFK+
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM 630
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
P G ++LLSN ++A GRW +A VRK M+D G+KK GCSWI V N++H+F DT
Sbjct: 631 VPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTK 690
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H E+ L + +M+ GY+PDT FAL D+ EK + HSE++A++FGL+ +P
Sbjct: 691 HPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLP 750
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G + + KNL+ICGDCH+A F+S VGRE++VRD RFH F DG CSC +YW
Sbjct: 751 AGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 173/416 (41%), Gaps = 75/416 (18%)
Query: 55 YSKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPD 110
Y+ G D+ FD +P R+ NA IS A+ F +L + PD
Sbjct: 99 YAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPD 158
Query: 111 LITFCAFLNACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---A 165
+F + L+A L + QLH + + G +SV N L+ Y KC+ G+ A
Sbjct: 159 DYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDA 218
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQN---------YEEENG-------------------C 197
+ V D + +K++++W +++V +V+ +EE +G
Sbjct: 219 RKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCA 278
Query: 198 QMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA----CVEGNIFVG 250
+ F RR + + P +F +S+LSACA G+SVH ++ E + V
Sbjct: 279 EAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVN 338
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------ 304
+ALV +Y K G I A F+ M +++V WN I+ GY G D A F+EM
Sbjct: 339 NALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSEL 398
Query: 305 ----------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
MR E V P T ++AC GA++ G K ++
Sbjct: 399 SWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG-KQLHAH 457
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ G + ++ + R G V A + MP ++S W A+++A +G
Sbjct: 458 LVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVS-WNAMISALGQHG 512
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P D+T+ A L GKQLHA ++ G G + MY++ G
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F MP + +WNA IS G + A++ F + G PD I+F L A
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTA 542
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK 166
C+ L+ G Q + R G L+D G+ +G A+
Sbjct: 543 CNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEAR 589
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 332/559 (59%), Gaps = 24/559 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H+LA+KS + + DMYSK G D A ++F++M ERN+ +W + I+
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G AI + + G + D++ + L+AC+ L G+ +H ++ + N+ V
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+D Y KC + A VF ++ K+ +SW +M+ +
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GEL 290
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++ +L ACA ++ LE G+ +H ++ + V +ALVD+Y KCG + A +
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P ++LV W +I GY G+ + A+++F EM E P+ V+ + +L ACS +
Sbjct: 351 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE--PDEVSFISILYACSHS 408
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + FY M + I+P EHYAC+VDLL R G + +AY+ I+ +P+ P ++WGA
Sbjct: 409 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 468
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR+Y EL A+ +F+L+P ++G +VLL+N++A +WEE +R+++ G+
Sbjct: 469 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGL 528
Query: 449 KKGAGCSWISVKNRIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+K GCSWI +K R+++F ++SH + +I+++L K+R +MK GY P T +AL + +
Sbjct: 529 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 588
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E +K + HSEK+A+AFGL+ +PP IR+TKNLR+CGDCH KF+S RE+++R
Sbjct: 589 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 648
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DGYCSC +W
Sbjct: 649 DSNRFHHFKDGYCSCRGFW 667
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 168/336 (50%), Gaps = 25/336 (7%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ +R++ +WN+ IS V G + + + + G + DL T + L C
Sbjct: 64 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 123
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L LG+ +H ++S F+ ++ N L+D Y KC ++ A VF+ + ++N VSW
Sbjct: 124 AKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 183
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + + +EGV+ I+S+L ACAR L+ G+ VH
Sbjct: 184 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 243
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ N+FV +AL+DMY KCGS++ A F+ M ++++ WN ++G
Sbjct: 244 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--------------- 288
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E P+ T+ C+L AC+ A+E+G +I + L+ G +VDL
Sbjct: 289 --------ELKPDSRTMACILPACASLSALERGKEI-HGYILRNGYSSDRHVANALVDLY 339
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G++ A + +P + +S W ++ ++G
Sbjct: 340 VKCGVLGLARLLFDMIPSKDLVS-WTVMIAGYGMHG 374
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 61/293 (20%)
Query: 152 LVDFYGKCNEVGLAKVVFDG---------------------------------------- 171
LV FY C ++ + VFD
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 172 -----------IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ D++ +SW SM+ YV N E G ++ G++ I SVL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
CA+ L LG++VH++A+K+ E I + L+DMY KCG + A F KM ERN+V
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFY 339
W ++I GY G +D A+ ++M E V + V + +L AC+R+G+++ G +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEK---EGVKLDVVAITSILHACARSGSLDNGKDVHD 238
Query: 340 SMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ + + C ++D+ + G ++ A + M ++ IS W ++
Sbjct: 239 YIKAN---NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS-WNTMV 287
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A ++L GK++H L++G D V + D+Y K G+ A
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P ++L +W I+ + G AI F +R G EPD ++F + L ACS
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409
Query: 126 LLQLGRQLHGFLVRSGFD 143
LL+ G + +++++ F+
Sbjct: 410 LLEQGWRFF-YIMKNDFN 426
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 335/589 (56%), Gaps = 13/589 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + + T+ L K A GK++H +G F+ +MY K L
Sbjct: 276 MERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNL 335
Query: 61 KDDADKMFDEMPERNLATWNAYIS---NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
++A +FD+MPERN+ +W IS NA L R A+ + R G P++ TF +
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDR---AMRLLAFMFRDGVMPNMFTFSSV 392
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC L +QLH ++++ G + +V V + L+D Y K E+ A VF ++ +
Sbjct: 393 LRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDS 449
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V W S++ + Q+ + + ++ + RR G ++SVL AC ++ LELGR H
Sbjct: 450 VVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVH 509
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K + ++ + +AL+DMY KCGS++DA+ FN+M +++++ W+ +I G A G + A
Sbjct: 510 VLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEA 567
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ FE M + PN++T++ VL ACS AG V +G F SM YGI PG EHY C+
Sbjct: 568 LNLFESMKVQGPK--PNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCM 625
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DLLGRA +D ++I EM P + W LL+ACR +L AA + KLDP D+
Sbjct: 626 LDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDT 685
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VLLSN++A + RW + VR+ MK GI+K GCSWI V +IH F D SH +
Sbjct: 686 GAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQID 745
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI L + + AGY+PDTNF L D+E E++ + +HSEK+A+ FG+++ P I
Sbjct: 746 EINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTI 805
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNL+ICGDCH K I+ + R +++RD R+H F DG CSC DYW
Sbjct: 806 RIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+A+ ++ R G D IT+ + C ++ G+++H + +G+ + N L+
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+ Y K N + A+V+FD + ++N VSW +M+ Y + ++ R+GV P F
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
SSVL AC R+ L + +H+ +K +E ++FV SAL+D+Y K G + +A F +M
Sbjct: 388 TFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVE 332
+ V WN+II +A D AL ++ SMR P + TL VL AC+ +E
Sbjct: 445 MTGDSVVWNSIIAAFAQHSDGDEALHLYK---SMRRVGFPADQSTLTSVLRACTSLSLLE 501
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + + LK+ + ++D+ + G ++ A I M + IS W ++
Sbjct: 502 LGRQA-HVHVLKFDQDLILNN--ALLDMYCKCGSLEDAKFIFNRMAKKDVIS-WSTMI 555
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/612 (37%), Positives = 335/612 (54%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---- 63
PN +TFP L K+ + G+Q+H LK G D++V S MY + +D
Sbjct: 62 PNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKV 121
Query: 64 ---------------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
A K+FDE+P +++ +WNA IS G K A+
Sbjct: 122 FDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEAL 181
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + + PD T+ L+AC+ ++LGRQ+H ++ GFD N+ + N L+D Y
Sbjct: 182 ELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLY 241
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A +F G+ K+ +SW +++ Y + +F R G P D +
Sbjct: 242 SKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 301
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SVL ACA + +++GR +H K V + ++L+DMY KCG I+ A FN M
Sbjct: 302 SVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSML 361
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++L WNA+I G+A G AD + F M + E P+ +T V +LSACS +G ++ G
Sbjct: 362 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE--PDDITFVGLLSACSHSGMLDLG 419
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
IF SMT Y + P EHY C++DLLG +GL A E+I M M P +W +LL AC+
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G EL A NL K++P + +++LLSN++A+ GRWE+ +R + +KK GC
Sbjct: 480 MHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGC 539
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I V + + F D H +N EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 540 SSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 599
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K +S I RE++ RD RFH
Sbjct: 600 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHH 659
Query: 575 FWDGYCSCSDYW 586
F DG CSC+DYW
Sbjct: 660 FRDGVCSCNDYW 671
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 185/392 (47%), Gaps = 47/392 (11%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ + E N WN I L P +++ ++ + G P+ TF L +C+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---------------------------- 155
G+Q+HG +++ GFD ++ V L+
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 156 ---YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
Y ++ A+ +FD I K+ VSW +M+ Y + + ++F + V P +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+VLSACA +ELGR VH+ + N+ + +AL+D+Y KCG ++ A F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F+EM +R PN VT++ VL AC+ GA++
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEM--LRSGETPNDVTMLSVLPACAHLGAID 314
Query: 333 KG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G + ++ LK G+ + ++D+ + G ++ A+++ M + ++S W A++
Sbjct: 315 IGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 372
Query: 391 NACRVYGKPELGRIAADNLFK------LDPND 416
++G+ + A+ +LF ++P+D
Sbjct: 373 FGFAMHGRAD----ASFDLFSRMRKIGIEPDD 400
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 155/331 (46%), Gaps = 4/331 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T+ + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPA 306
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ A VF+ ++ K+
Sbjct: 307 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 366
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + + +F R+ G+EP D +LSAC+ L+LGR + ++
Sbjct: 367 SWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 426
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ G+ ++
Sbjct: 427 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 486
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
A S + + + E +Y+ L + ++ R
Sbjct: 487 AESFAQNLIKIEPENPSSYILLSNIYASAGR 517
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/594 (39%), Positives = 335/594 (56%), Gaps = 39/594 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK--MFDEMPERNLATWNAYISNAV 87
KQ+HA + G FV +K + D +F ++ N W A I
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYA 115
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG-FLVRSGFDGNV 146
L G ++ + ++RR G P TF A L ACS + LGRQ+H ++ GF ++
Sbjct: 116 LQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDL 175
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV------------------ 188
V N L+D Y KC +G VFD ++D++ +SW S++V Y
Sbjct: 176 YVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMK 235
Query: 189 -------------QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
QN ++F + GV+ + + V+SACA++ + V
Sbjct: 236 DMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVR 295
Query: 236 AVAVKACV--EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VA ++ N+ VGSAL+DMY KCGS++DA F +M ERN+ ++++I G+A G
Sbjct: 296 DVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGL 355
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A A+ F+EM ++ E PN VT + VL+ACS AG VE+G ++F M +G+ P +H
Sbjct: 356 AGAAMELFDEM--LKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDH 413
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YAC+VDLLGRAG ++ A ++K MPM P VWGALL ACR++G P++ +IAA +LF+L+
Sbjct: 414 YACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELE 473
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS-VKNRIHIFQAKDTS 472
PN GN++LLSN++A+ GRW++ VRK M+ G+KK GCSW+ K IH F A D S
Sbjct: 474 PNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMS 533
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H ++ EI+ L L + +K GY P+ + YD+ +EEK + HSEK+ALAFGL+
Sbjct: 534 HPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTN 593
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IRI KNLRIC DCHS S I GRE++VRDN RFH F DG CSC ++W
Sbjct: 594 AGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 38/381 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDM----- 54
MRR+ I P FTF L KA SA G+Q+H + G D++VG + DM
Sbjct: 130 MRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCG 189
Query: 55 --------------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
Y+K G + A ++FD +P +++ W A ++
Sbjct: 190 CLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQ 249
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF--DGNV 146
RP+ A++ F ++ G + D +T ++AC+ + + +SGF NV
Sbjct: 250 NARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNV 309
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y KC V A VF+ + ++N S+ SM+V + + ++F +
Sbjct: 310 VVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKT 369
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQ 264
++P VL+AC+ +E G+ + A+ ++ C V + + +VD+ G+ G ++
Sbjct: 370 EIKPNRVTFIGVLTACSHAGMVEQGQQLFAM-MEECHGVAPSEDHYACMVDLLGRAGRLE 428
Query: 265 DAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+A MP + W A++G G+ DMA + + + + NY+ L + +
Sbjct: 429 EALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYA 488
Query: 324 ACSRAGAVEKGMKIFYSMTLK 344
+ R V K K+ + LK
Sbjct: 489 SAGRWDDVSKVRKLMRAKGLK 509
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 352/628 (56%), Gaps = 50/628 (7%)
Query: 7 SPNDFTFPCL--------FKASSALH---IPVTGKQLHALALKSGQIHDVFVGCSAFDMY 55
SPN FP L ++ S LH + KQ+HA +++G +V M
Sbjct: 25 SPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRML 84
Query: 56 SKTGLKDDADKM--FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
+K + + + F ++ N W A I L G + + + +RR G P T
Sbjct: 85 TKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFT 144
Query: 114 FCAFLNACSDCSLLQLGRQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-- 170
F A AC + LG+Q+H ++ GF ++ V N ++D Y KC +G A+ VFD
Sbjct: 145 FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEM 204
Query: 171 -------------------------GIID----KNDVSWCSMLVVYVQNYEEENGCQMFL 201
G+ D K+ V+W +M+ Y QN + + F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV--EGNIFVGSALVDMYGK 259
+ G+E + ++ V+SACA++ ++ + +A ++ GN+ VGSAL+DMY K
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSK 324
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CGS +A F M ERN+ ++++I GYA G A AL F +M ++ E PN VT +
Sbjct: 325 CGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM--LKTEIRPNKVTFI 382
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+LSACS AG VE+G ++F M +G+ P +HYAC+VDLLGRAG ++ A +++K MPM
Sbjct: 383 GILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
P VWGALL ACR++G P++ +IAA+ LFKL+PN GN++LLSN++A+ GRWEE +
Sbjct: 443 EPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKL 502
Query: 440 RKEMKDVGIKKGAGCSWISVKN-RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
RK +++ G KK GCSW KN IH F A DT+H R++EI+ L +L E +++ GY P+
Sbjct: 503 RKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
A YD+ ++EK + HSEK+ALA+GL+ G I+I KN+RIC DCH+ S
Sbjct: 563 LGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASE 622
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I GRE+IVRDN RFH F +G CSC ++W
Sbjct: 623 ITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 169/387 (43%), Gaps = 50/387 (12%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALA-LKSGQIHDVFVGCSAFDMYSKTG 59
MRR+ + P FTF LFKA A GKQ+HA L G D++VG S D+Y K G
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCG 192
Query: 60 LKDDADKMFDEMPERNLAT-------------------------------WNAYISNAVL 88
A K+FDEM ER++ + W A ++
Sbjct: 193 FLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQ 252
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF--DGNV 146
GRPK A++ F ++ G E D +T ++AC+ ++ + RSGF GNV
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y KC A VF+ + ++N S+ SM++ Y + + Q+F +
Sbjct: 313 VVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT 372
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA--------LVDMYG 258
+ P +LSAC+ +E GR + A K F G A +VD+ G
Sbjct: 373 EIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK-------FFGVAPSPDHYACMVDLLG 425
Query: 259 KCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A MP E N W A++G G+ D+A + E+ + + NY+
Sbjct: 426 RAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYIL 485
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLK 344
L + ++ R V K K+ K
Sbjct: 486 LSNIYASAGRWEEVSKLRKVIREKGFK 512
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 352/628 (56%), Gaps = 50/628 (7%)
Query: 7 SPNDFTFPCL--------FKASSALH---IPVTGKQLHALALKSGQIHDVFVGCSAFDMY 55
SPN FP L ++ S LH + KQ+HA +++G +V M
Sbjct: 25 SPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRML 84
Query: 56 SKTGLKDDADKM--FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
+K + + + F ++ N W A I L G + + + +RR G P T
Sbjct: 85 TKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFT 144
Query: 114 FCAFLNACSDCSLLQLGRQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-- 170
F A AC + LG+Q+H ++ GF ++ V N ++D Y KC +G A+ VFD
Sbjct: 145 FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEM 204
Query: 171 -------------------------GIID----KNDVSWCSMLVVYVQNYEEENGCQMFL 201
G+ D K+ V+W +M+ Y QN + + F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV--EGNIFVGSALVDMYGK 259
+ G+E + ++ V+SACA++ ++ + +A ++ GN+ VGSAL+DMY K
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSK 324
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CGS +A F M ERN+ ++++I GYA G A AL F +M ++ E PN VT +
Sbjct: 325 CGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM--LKTEIRPNKVTFI 382
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+LSACS AG VE+G ++F M +G+ P +HYAC+VDLLGRAG ++ A +++K MPM
Sbjct: 383 GILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
P VWGALL ACR++G P++ +IAA+ LFKL+PN GN++LLSN++A+ GRWEE +
Sbjct: 443 EPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKL 502
Query: 440 RKEMKDVGIKKGAGCSWISVKN-RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
RK +++ G KK GCSW KN IH F A DT+H R++EI+ L +L E +++ GY P+
Sbjct: 503 RKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
A YD+ ++EK + HSEK+ALA+GL+ G I+I KN+RIC DCH+ S
Sbjct: 563 LGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASE 622
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I GRE+IVRDN RFH F +G CSC ++W
Sbjct: 623 ITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 169/387 (43%), Gaps = 50/387 (12%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALA-LKSGQIHDVFVGCSAFDMYSKTG 59
MRR+ + P FTF LFKA A GKQ+HA L G D++VG S D+Y K G
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCG 192
Query: 60 LKDDADKMFDEMPERNLAT-------------------------------WNAYISNAVL 88
A K+FDEM ER++ + W A ++
Sbjct: 193 FLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQ 252
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF--DGNV 146
GRPK A++ F ++ G E D +T ++AC+ ++ + RSGF GNV
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y KC A VF+ + ++N S+ SM++ Y + + Q+F +
Sbjct: 313 VVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT 372
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA--------LVDMYG 258
+ P +LSAC+ +E GR + A K F G A +VD+ G
Sbjct: 373 EIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK-------FFGVAPSPDHYACMVDLLG 425
Query: 259 KCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A MP E N W A++G G+ D+A + E+ + + NY+
Sbjct: 426 RAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYIL 485
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLK 344
L + ++ R V K K+ K
Sbjct: 486 LSNIYASAGRWEEVSKLRKVIREKGFK 512
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 339/614 (55%), Gaps = 38/614 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN +TFP L K+ + G+Q+HA +K G D + S MY++ G +DA K+
Sbjct: 81 PNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKV 140
Query: 68 FDE-------------------------------MPERNLATWNAYISNAVLGGRPKNAI 96
FD + ER++ +WNA I+ V + A+
Sbjct: 141 FDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEAL 200
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDF 155
+ F + RT PD T + L+AC+ ++LGR++H + GF ++ + N +
Sbjct: 201 ELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGL 260
Query: 156 YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
Y KC +V +A +F+G+ K+ VSW +++ Y + +F R G P D +
Sbjct: 261 YSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTM 320
Query: 216 SSVLSACARIAGLELGRSVHAVA---VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
SVL ACA + +++GR +H +K G+ + ++L+DMY KCG I+ A FN
Sbjct: 321 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSA-LRTSLIDMYAKCGDIEAAHQVFNS 379
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M ++L WNA+I G+A G A+ A F M E P+ +TLV +LSACS +G ++
Sbjct: 380 MMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIE--PDDITLVGLLSACSHSGLLD 437
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G IF S+T Y I P EHY C++DLLG AGL A EII MPM P +W +LL A
Sbjct: 438 LGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKA 497
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
C+++G EL A L +++P +SG++VLLSN++A GRWE+ +R+ + G+KK
Sbjct: 498 CKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVP 557
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
GCS I + + +H F D H ++ EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 558 GCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKE 617
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
+ HHSEK+A+AFGLI+ PG + + KNLR+C +CH A K IS I RE++ RD RF
Sbjct: 618 GALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRF 677
Query: 573 HRFWDGYCSCSDYW 586
H F DG CSC DYW
Sbjct: 678 HHFRDGVCSCCDYW 691
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 196/423 (46%), Gaps = 52/423 (12%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ E NL WN + + ++ ++ + G P+ TF L +C+
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 124 CSLLQLGRQLHGFLVRSG---------------------------FDG----NVSVCNGL 152
+ GRQ+H +++ G FD +V C L
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+ Y +V A+ VFD I +++ VSW +M+ YV+N E ++F R V P +
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEG-NIFVGSALVDMYGKCGSIQDAEIAFN 271
+ SVLSACA+ +ELGR +H + G ++ + +A + +Y KCG ++ A F
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ +++V WN +IGGY H AL F+EM +R PN VT++ VL AC+ GA+
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM--LRSGESPNDVTMLSVLPACAHLGAI 333
Query: 332 EKG--MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ G + ++ LK G+ G+ ++D+ + G ++ A+++ M M ++S W A+
Sbjct: 334 DIGRWIHVYIDKRLK-GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAM 391
Query: 390 LNACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+ ++G+ AA +LF ++P+D + L + +A DL R
Sbjct: 392 IFGFAMHGRAN----AAFDLFSRMRKNGIEPDD----ITLVGLLSACSHSGLLDLGRHIF 443
Query: 444 KDV 446
K V
Sbjct: 444 KSV 446
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/649 (34%), Positives = 356/649 (54%), Gaps = 68/649 (10%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E ++P+ F + + +A G+++H+ +K G V V S MY K G +
Sbjct: 157 EGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216
Query: 64 ADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKNAID 97
A +F+ M R+ ++WNA +S NA++ G +N +D
Sbjct: 217 ARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLD 276
Query: 98 ----AFIN--LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
F + L + EPD T + L+AC++ +L++G+Q+H +++R+G + + N
Sbjct: 277 DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNA 336
Query: 152 LVDFYGKCNEVGLAKV---------------------------------VFDGIIDKNDV 178
L+ Y K V A+ VFD + +++ +
Sbjct: 337 LISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI 396
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +M+V Y QN + + ++F + R G EP +++VLSACA +A L G+ +H A
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRA 456
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHADMA 297
+++ E ++ V +A++ +Y + GS+ A F+++ R V W ++I A G + A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ FEEM +R P+ VT + V SAC+ AG ++KG + + M ++GI P HYAC+
Sbjct: 517 IVLFEEM--LRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLL RAGL+ A+E I+ MP+ P VWG+LL ACRV +L +AA+ L +DP++S
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G + L+N+++A GRW +A + K KD +KK G SW V++++H+F A D H +
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I ++ EE+K AG++PD N L+DV++E K + HSEK+A+AFGLI+ P +
Sbjct: 695 AICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 754
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+C DCH+A KFIS +V RE+IVRD RFH F DGYCSC DYW
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 188/436 (43%), Gaps = 72/436 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+ F S MY+K+G DA +F +MPER+ +W + GR +A+ F+++
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
G P L++C+ +GR++H F+++ G V V N ++ YGKC +
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYV------------QNYEE--------------ENGC 197
A+ VF+ + +++ SW +M+ +Y +N EE +NG
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275
Query: 198 --------QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
LTA +EP +F ++SVLSACA + L++G+ +H+ ++ + + +
Sbjct: 276 DDMALKFFSRMLTA--SSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333
Query: 250 GSALVDMYGKCGSIQ---------------------------------DAEIAFNKMPER 276
+AL+ Y K GS++ A F+ M R
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+++ W A+I GY G D A+ F M +R PN TL VLSAC+ + G +
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSM--IRSGPEPNSHTLAAVLSACASLAYLGYGKQ 451
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + ++ + ++ + R+G V A + ++ R W +++ A +
Sbjct: 452 I-HCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQH 510
Query: 397 GKPELGRIAADNLFKL 412
G E + + + ++
Sbjct: 511 GLGEQAIVLFEEMLRV 526
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN T + A ++L GKQ+H A++S Q V V + +Y+++G
Sbjct: 421 MIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480
Query: 61 KDDADKMFDEMPERN-LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++FD++ R TW + I G + AI F + R G +PD +T+ +
Sbjct: 481 VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Query: 120 ACSDCSLLQLGRQLH 134
AC+ + G++ +
Sbjct: 541 ACTHAGFIDKGKRYY 555
>gi|242053821|ref|XP_002456056.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
gi|241928031|gb|EES01176.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
Length = 592
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 330/583 (56%), Gaps = 18/583 (3%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQI-----HDVFVGCSAFDMYSKTGLKDDADKMFDE 70
L S+A +P G+QLH LK+G + +G Y++ L D + + F +
Sbjct: 16 LVALSAARALP-KGQQLHGHLLKAGHVPATASSHTLLGHHLLTFYARCALPDLSLRAFLD 74
Query: 71 MP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE------PDLITFCAFLNACSD 123
+P + A W++ IS+ G A D F + G P A S
Sbjct: 75 LPAPPSPAAWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDRNIPSAAKAVAAAETLSR 134
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
LHG ++ F G+V V + ++D Y KC + A+ +FD + ++N VSW ++
Sbjct: 135 PPFAP--HALHGLAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSAL 192
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +F A E V DF +SS++ CA ELG VHA A K +
Sbjct: 193 ICGYADAGMHPAAMGIFRLALEEAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTAL 252
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + FVGS+LV +Y KCG ++ A FN+ PE+NL WNA++ A GH A F E
Sbjct: 253 DASPFVGSSLVSVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFME 312
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN++T +C+++ACS AG V++G K ++S+ YGI+P AEHYA +VDLLGR
Sbjct: 313 MQNAGFR--PNHITFLCLVTACSHAGLVDEG-KRYFSLMKDYGIEPQAEHYASMVDLLGR 369
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
G + A ++I+ MPM P SVWGALL +CR++ + IAA LF+ SG H+LL
Sbjct: 370 VGRIKEALDLIESMPMEPPESVWGALLMSCRIFKDADTAEIAAKRLFETGSRSSGAHMLL 429
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
S+ +AA GR +A L RK M+D G++K G SW+ +H F + H+R+ EI +L
Sbjct: 430 SSTYAAAGRHIDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHQRSEEIYKVL 489
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
K+ E+M+AAGY+ DT+ + DV+ +EK V +HSE++A+ GL+ +P GVPIR+ KNL
Sbjct: 490 EKVGEKMEAAGYVADTSAVVKDVDGDEKRATVRYHSERLAIGLGLLIVPQGVPIRVMKNL 549
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+C DCHSA K+++ GR V++RDN RFHRF DG CSC D+W
Sbjct: 550 RVCDDCHSAIKYLTKCTGRVVVLRDNRRFHRFEDGVCSCGDFW 592
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT + + +A + G Q+HA A K+ FVG S +YSK GL +
Sbjct: 215 EAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTALDASPFVGSSLVSVYSKCGLVEC 274
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F+E PE+NL WNA + + G A + F+ ++ G P+ ITF + ACS
Sbjct: 275 AYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQNAGFRPNHITFLCLVTACSH 334
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + G + +VD G+ + A + + + ++ + W +
Sbjct: 335 AGLVDEGKRYFSLMKDYGIEPQAEHYASMVDLLGRVGRIKEALDLIESMPMEPPESVWGA 394
Query: 183 MLV 185
+L+
Sbjct: 395 LLM 397
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 327/569 (57%), Gaps = 3/569 (0%)
Query: 19 ASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT 78
A SA + T K +HA + G H++ +G + MY K G A ++ MP+R+ T
Sbjct: 368 ALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVT 427
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA-CSDCSLLQLGRQLHGFL 137
WNA I P AI+AF LR G + IT L+A S LL G +H +
Sbjct: 428 WNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHI 487
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
V +GF+ V + L+ Y +C ++ + +FD + +KN +W ++L E
Sbjct: 488 VVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEAL 547
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
++ + R +G+ F S + + L+ G+ +H++ +K E N +V +A +DMY
Sbjct: 548 KLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMY 607
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
GKCG I D + R+ WN +I A G A +F EM + P++VT
Sbjct: 608 GKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLR--PDHVT 665
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
V +LSACS G V++G+ F SM+ K+G+ G EH C++DLLGRAG + A I +M
Sbjct: 666 FVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKM 725
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P+ PT VW +LL AC+++G EL R AAD LF+LD +D +VL SN+ A+T RW + +
Sbjct: 726 PVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVE 785
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
VRK+M+ IKK CSW+ +KN++ F D H +N EI A L +L++ ++ AGY+P
Sbjct: 786 NVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMP 845
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
DT+++L D +EE+K + +HSE+IALAFGLI G P+RI KNLR+CGDCHS FK +S
Sbjct: 846 DTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVS 905
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I+GR++I+RD RFH F G CSCSDYW
Sbjct: 906 QIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 189/399 (47%), Gaps = 9/399 (2%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA +K G DVFVG S Y G + D +F E+ E N+ +W + + G
Sbjct: 80 QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
K + + LRR G + + +C LG Q+ G +++SG D VSV N
Sbjct: 140 CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVAN 199
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ +G C+ + A VFD + +++ +SW S++ V N E + F R +
Sbjct: 200 SLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKT 259
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
IS++L C L GR +H + VK+ +E N+ V ++L+ MY + G +DAE F
Sbjct: 260 DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVF 319
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+KM ER+L+ WN+++ + G+ AL EM R NYVT LSAC
Sbjct: 320 HKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR--KATNYVTFTTALSACYNL-- 375
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ +KI ++ + G+ +V + G+ G + A + K MP R ++ W AL+
Sbjct: 376 --ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVT-WNALI 432
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+P I A NL + + N++ + N+ +A
Sbjct: 433 GGHADNKEPN-AAIEAFNLLR-EEGVPVNYITIVNLLSA 469
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 203/402 (50%), Gaps = 10/402 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR+ + N+ + ++ L + G Q+ +KSG V V S M+
Sbjct: 151 LRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDS 210
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +FD+M ER+ +WN+ I+ +V G + +++ F +R T + D IT A L
Sbjct: 211 IEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPV 270
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+ GR LHG +V+SG + NV VCN L+ Y + + A+ VF + +++ +SW
Sbjct: 271 CGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISW 330
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ +V N ++ + + ++ LSAC + L++ VHA +
Sbjct: 331 NSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVIL 387
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ +G+ALV MYGK GS+ A+ MP+R+ V WNA+IGG+A + A+ +
Sbjct: 388 LGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEA 447
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSA-CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +R E VP NY+T+V +LSA S ++ GM I + + G + + ++
Sbjct: 448 F---NLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVA-GFELETFVQSSLI 503
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G ++ + I + + + S W A+L+A YG E
Sbjct: 504 TMYAQCGDLNTSNYIFDVLANKNS-STWNAILSANAHYGPGE 544
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 5/338 (1%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYSK G + A +FD+MPERN A+WN +S V G + A+ F ++ G P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 114 FCAFLNACSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + AC + G Q+H +++ G +V V L+ FYG V +VF I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ N VSW S++V Y N + ++ RR+GV + +++V+ +C + LG
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
V +K+ ++ + V ++L+ M+G C SI++A F+ M ER+ + WN+II H G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
H + +L F +M A +Y+T+ +L C A + G + + M +K G++
Sbjct: 241 HCEKSLEYFSQMR--YTHAKTDYITISALLPVCGSAQNLRWG-RGLHGMVVKSGLESNVC 297
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ + +AG + A + +M R IS W +++
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLIS-WNSMM 334
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + I + F+F L + G+QLH+L +K G + +V + DMY K G
Sbjct: 553 MRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGE 612
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD ++ + R+ +WN IS G + A +AF + G PD +TF + L+A
Sbjct: 613 IDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSA 672
Query: 121 CSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + G + C ++D G+ ++ A+ + + + D+
Sbjct: 673 CSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDL 732
Query: 179 SWCSML 184
W S+L
Sbjct: 733 VWRSLL 738
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/579 (38%), Positives = 329/579 (56%), Gaps = 42/579 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FT+P LFKA S G+Q+H +K G DV + + MY+ G +DA KM
Sbjct: 130 PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKM 189
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F GE D++ + ++ C +L
Sbjct: 190 F------------------------------------YSGESDVVCWNTMIDGYLKCGVL 213
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ + L + N+ N +++ K +G A+ +FD + +++++SW SM+ Y
Sbjct: 214 EAAKGLFAQMPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + ++F +RE P F++SSVL+AC+ I ++ GR VHA + ++ +
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+AL+DMY KCG + F +M ER + WNA+IGG A G A+ AL F ++
Sbjct: 330 VLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEG 389
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R + PN +TLV VL+AC+ AG V+KG++IF +M YG+ P EHY C+VDLLGR+GL
Sbjct: 390 RMK--PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
A ++I MPM+P +VWGALL ACR++G +L L +L+P +SG +VLLSN++
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A GR+++ +RK MKD GIK G S + + +H F+ D SH + EI L ++
Sbjct: 508 AKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
E ++ AG+ PDT+ L+D++EEEK T V +HSEK+A+AFGLI PG I I KNLR+C
Sbjct: 568 ERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCD 627
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSA K IS I RE+IVRD R+H F +G CSC D+W
Sbjct: 628 DCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 135/339 (39%), Gaps = 72/339 (21%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCSML 184
LQ QLHG ++RSG + V L+ Y + A VF I + N W ++
Sbjct: 46 LQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105
Query: 185 VVYVQNYEEENGC----QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++N + +M + AR P F ++ AC+ ++ GR +H VK
Sbjct: 106 KGCLENNKLFKAIYFYGRMVIDAR-----PNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDA---------------------------EIA---F 270
+ ++ + SA + MY G ++DA E A F
Sbjct: 161 HGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS------------------------ 306
+MP +N+ WN +I G A G+ A F+EM+
Sbjct: 221 AQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 307 -----MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
R E P L VL+ACS GA+++G + ++ + IK A ++D+
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTALLDMY 339
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G +D +E+ +EM R I W A++ ++G+ E
Sbjct: 340 AKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAIHGRAE 377
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE P F + A S + G+ +HA ++ D +G + DMY+K G
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++F+EM ER + TWNA I + GR ++A++ F L+ +P+ IT L A
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C+ + G ++ + G D + +VD G+ A+ + + + + N
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464
Query: 179 SWCSML 184
W ++L
Sbjct: 465 VWGALL 470
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 331/580 (57%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FTFP L K + L GK LH +K D+++ + +MY+ G A +
Sbjct: 77 PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ M RN W + IS + P A+ + + G PD +T ++AC++ L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+G +LH + + + LV+ Y KC ++ A+ VFD + DK+ +W +++ Y
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGY 256
Query: 188 VQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
V+N Q+F A + P + I +V+SACA++ LE GR VH + +
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + ++L+DM+ KCG I A+ F+ M ++L+ WN+++ G+A G AL+ F M +
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQT 376
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ +T + VL+ACS AG V++G K+FY + YG++ +EHY C+VDLL RAGL
Sbjct: 377 TDLQ--PDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGL 434
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A E I+ MP++P ++WG++L ACRVY ELG AA L KL+P + G ++LLSN+
Sbjct: 435 LAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNI 494
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A W E VR+ M + GI+K GCS + + N H F A D SH EI ML ++
Sbjct: 495 YAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQV 554
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
RE++K AGY+ DT+ L ++++ +K V HSEK+AL +GL+ G I I KNLR+C
Sbjct: 555 REKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVC 614
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+ K +S I R++ +RD NRFH F DG CSC DYW
Sbjct: 615 SDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 182/358 (50%), Gaps = 15/358 (4%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACS 122
A +F E ++ TWN+ + V P+ A+ ++ L R+ PD TF + L C+
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
++G+ LHG +V+ ++ + L++ Y C ++ A+ +F+ + +N V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ Y++N+ ++ +G P + +++++SACA + L +G +H+ +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ +GSALV+MY KCG ++ A F+K+ ++++ W+A+I GY + AL F
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 303 EM---TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVV 358
E+ ++MR PN VT++ V+SAC++ G +E G + Y + G + ++
Sbjct: 271 EVAGGSNMR----PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLI 324
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
D+ + G +D A I M + IS W +++N ++G LGR A + D
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLIS-WNSMVNGFALHG---LGREALAQFRLMQTTD 378
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/648 (36%), Positives = 344/648 (53%), Gaps = 73/648 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD- 62
+ P+D++F L A +H QLH LKSG + V + +Y K +
Sbjct: 157 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEA 216
Query: 63 --DADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
DA K+ DEMP+++ TW + NA++ G ++
Sbjct: 217 SWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 276
Query: 95 AI--DAFINLRRTGGEP---DLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGF--DGN 145
+ DAF RR E D TF + L+AC++ G+ +HG ++R F +
Sbjct: 277 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 336
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFD---------------GIID---------------- 174
+ V N LV Y K ++ +AK +FD G ID
Sbjct: 337 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 396
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
KND+SW M+ YV E+ ++F R E V+P D+ + ++AC + L+ GR +
Sbjct: 397 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 456
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA V+ E + G+AL+ MY KCG++ DA + F MP + V WNA+I GH
Sbjct: 457 HAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHG 516
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F++M + + P+ ++ + +L+AC+ AG V++G F SM +GI PG +HY
Sbjct: 517 REALELFDQMVAEGID--PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
A ++DLLGR+G + A ++IK MP PT S+W A+L+ CR G E G AAD LF++ P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
G ++LLSN ++A GRW +A VRK M+D G+KK GCSWI V ++IH+F DT H
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
E+ L + M+ GY+PDT F L+D+E EK + HSEK+A+ FGL+ +PPG
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 754
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
+ + KNLRICGDCH+A F+S VGRE++VRD RFH F DG CSC
Sbjct: 755 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 170/407 (41%), Gaps = 74/407 (18%)
Query: 63 DADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
DA FD +P R+ NA +S A+ F L +G PD +F A ++
Sbjct: 110 DAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALIS 169
Query: 120 ACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---AKVVFDGIID 174
A L QLH +++SG +SV N L+ Y KC+ A+ V D + D
Sbjct: 170 AVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPD 229
Query: 175 KNDVSWCSMLVVYVQN---------YEEENG----------------------CQMFLTA 203
K+D++W +M+V YV+ +EE +G ++F
Sbjct: 230 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 289
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA----CVEGNIFVGSALVDMYGK 259
E V +F +SVLSACA G+SVH ++ E + V +ALV +Y K
Sbjct: 290 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 349
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--------------- 304
G I A+ F+ M +++V WN I+ GY G D A+ F+ M
Sbjct: 350 GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY 409
Query: 305 -------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
MR E V P T ++AC GA++ G ++ ++ ++ G +
Sbjct: 410 VHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL-HAHLVQCGFEAS 468
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ + + G V+ A + MP ++S W A+++A +G
Sbjct: 469 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS-WNAMISALGQHG 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P D+T+ A L G+QLHA ++ G G + MY+K G
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F MP + +WNA IS G + A++ F + G +PD I+F L A
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK 166
C+ L+ G + R G L+D G+ +G A+
Sbjct: 545 CNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEAR 591
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 329/595 (55%), Gaps = 40/595 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K +HA L+ G D ++ G + + ++F + E N+ +N I VL
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
+ +I+ + ++R+ G PD TF L AC+ +LG +LHG +V++G + + V
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146
Query: 150 NGLVDFYGKCN--------------------------EVGLAKV------------VFDG 171
LV YGKC +G+ K VFDG
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+++K+ VSW SM+ Y N + +F EG P + + VL ACAR+ LELG
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ + GN +G+AL+DMY KCG + A F M ++++V WNA I G A
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
GH A F +M E P+ T V +L AC+ AG V++G + F SM + + P
Sbjct: 327 GHVKAAFGLFGQMEKSGIE--PDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEI 384
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGRAG +D A++++K MPM VWGALL CR++ +L L
Sbjct: 385 EHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIA 444
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L+P++SGN+VLLSN+++A+ +WE+A +R M + GIKK G SWI V +H F DT
Sbjct: 445 LEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDT 504
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + +I A L +L +++KA+GY+P T++ L+D+EEEEK +G HSEK+A+AFGLI+
Sbjct: 505 SHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLIST 564
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P IR+ KNLR+CGDCH A K IS GRE+IVRDNNRFH F DG CSC DYW
Sbjct: 565 APNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 156/367 (42%), Gaps = 40/367 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E +SP+ FTFP L KA + L G +LH L +K+G D FV S +Y K G
Sbjct: 99 MRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGF 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGR----------------------------- 91
D+A K+FD++PE+N+A W A IS + G+
Sbjct: 159 IDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSM 218
Query: 92 ---------PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
PK A+D F + G PD L AC+ L+LG + R+ F
Sbjct: 219 IQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEF 278
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
GN + L+D Y KC + A VF G+ K+ V W + + + + +F
Sbjct: 279 LGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQ 338
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCG 261
+ G+EP +L AC ++ GR +++ + I +VD+ G+ G
Sbjct: 339 MEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAG 398
Query: 262 SIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
+ +A MP E N + W A++GG + +++ ++ NYV L
Sbjct: 399 FLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSN 458
Query: 321 VLSACSR 327
+ SA +
Sbjct: 459 IYSASHK 465
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/584 (37%), Positives = 336/584 (57%), Gaps = 8/584 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ + + AS L + GK++HA A+K+G ++ VG + DMY+K
Sbjct: 257 LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGG 316
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ FD M ++L +W + A++ L+ G + D + L AC +
Sbjct: 317 RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLN 376
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +++HG+ +R G V + N ++D YG+C + A +F+ I K+ VSW SM+
Sbjct: 377 CLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMIS 435
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA--CV 243
YV N ++F + + G+EP + S+LSA ++ L+ G+ +H ++ +
Sbjct: 436 CYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFIL 495
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
EG+I + LVDMY +CGS++DA F RNL+ W A+I Y G+ + A+ F
Sbjct: 496 EGSI--SNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMR 553
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + +P+++T + +L ACS +G V +G M +Y ++P EHY C+VDLLGR
Sbjct: 554 MKDEK--IIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGR 611
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
++ AY+I+K M PT VW ALL ACR++ E+G +AA+ L +LD ++ GN+VL+
Sbjct: 612 RNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLV 671
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN+FAA GRW++ + VR MK G+ K GCSWI V N+IH F ++D H +I L
Sbjct: 672 SNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKL 731
Query: 484 TKLREEMK-AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
++ E++K GY+ T F L++V EEEK+ + HSE++A+A+GL+A G PIR+TKN
Sbjct: 732 AQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKN 791
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+CGDCHS +S RE+IVRD +RFH F DG CSC D+W
Sbjct: 792 LRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 11/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + +TFP L KA + G ++H LA+K G VFV S +Y+K
Sbjct: 49 MRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCND 108
Query: 61 KDDADKMFDEMPERN-LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+FD M RN + +WN+ IS G A+ F + + G + TF A L
Sbjct: 109 INGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQ 168
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC D S ++LG Q+H +++SG +V V N LV Y + ++ A V+F + K+ V+
Sbjct: 169 ACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVT 228
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SML ++QN + F + ++P I S++ A R+ L G+ +HA A+
Sbjct: 229 WNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAI 288
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + NI VG+ L+DMY KC + AF+ M ++L+ W GYA L
Sbjct: 289 KNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQN---KCYLQ 345
Query: 300 SFEEMTSMRCEAVPNYVTLV-CVLSACSRAGAVEKGMKIFYSMTLKYGIK-PGAEHYACV 357
+ E + ++ E + T++ +L AC + K +K + T++ G+ P ++ +
Sbjct: 346 ALELLRQLQMEGMDVDATMIGSILLACRGLNCLGK-IKEIHGYTIRGGLSDPVLQN--TI 402
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+D+ G G++D A I + + + +S W +++ +C V+
Sbjct: 403 IDVYGECGIIDYAVRIFESIECKDVVS-WTSMI-SCYVH 439
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 8/298 (2%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY K G DA+ +FD+M ER++ TWNA + V G A++ + +R G D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F L AC L G ++HG ++ G D V V N LV Y KCN++ A+ +FD +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 174 DKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ND VSW S++ Y N +F + GV + ++ L AC + ++LG
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+HA +K+ +++V +ALV MY + G + +A + F + +++V WN+++ G+ G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
AL F ++ + + P+ V+++ ++ A R G + G +I Y IK G
Sbjct: 241 LYSEALEFFYDLQN--ADLKPDQVSIISIIVASGRLGYLLNGKEIH-----AYAIKNG 291
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ T + A +L GK++H ++ G I + + + DMY++ G
Sbjct: 453 MKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGS 512
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+F RNL W A IS + G + A++ F+ ++ PD ITF A L A
Sbjct: 513 VEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYA 572
Query: 121 CSDCSLLQLGRQL 133
CS L+ G+
Sbjct: 573 CSHSGLVNEGKSF 585
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 352/652 (53%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +SP FT + + +A G+++H+ +K G V V S +MY K G
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
+ A +F+ MPER++++WNA +S NAV+ G +N
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272
Query: 95 AIDA----FIN--LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
++A F + L + PD T + L+AC++ ++ +G+Q+H +++RS V
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332
Query: 149 CNGLVDFYGKCNEVGLAKVV---------------------------------FDGIIDK 175
N L+ Y K V A+ V FD + ++
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +M+V Y QN + ++F R G EP + +++VLS CA +A LE G+ +H
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIH 452
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHA 294
A+++ E + V +++V MY + GS+ A F+++ R V W ++I A G
Sbjct: 453 CKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLG 512
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FEEM +R P+ +T V VLSAC+ G V++G + F + K+GI P HY
Sbjct: 513 EDAVGLFEEM--LRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHY 570
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDLL RAGL A E I++MP+ P WG+LL+ACRV+ +L +AA+ L +DP
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDP 630
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+SG + LSN+++A GRW +A + K KD +KK G SW + NR+H+F A D H
Sbjct: 631 GNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHP 690
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ + K+ +++K AG++PD L+DV++E K + HSEK+A+AFGL++ P
Sbjct: 691 QRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEK 750
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCH+A KFIS + RE+I+RD RFH F DG+CSC DYW
Sbjct: 751 TTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 178/422 (42%), Gaps = 68/422 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+VF S +Y+K+G DA +F EMPER+ +W + GR AI F+++
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
G P T L++C+ +GR++H F+V+ G V V N +++ YGKC +
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 164 LAKVV-------------------------------FDGIIDKNDVSWCSMLVVYVQNYE 192
A+ V F+ + D+ VSW +++ Y QN
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 193 EENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
F + P +F I+SVLSACA + + +G+ VHA +++ + V +
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 252 ALVDMYGKCGSIQDAEIA---------------------------------FNKMPERNL 278
AL+ MY K GS+++A F+ M R++
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V W A+I GY GH D A+ F M +R PN T+ VLS C+ +E G +I
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLM--IRSGPEPNSYTVAAVLSVCASLACLEYGKQI- 451
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ ++ + + +V + R+G + A + + R W +++ A +G
Sbjct: 452 HCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGL 511
Query: 399 PE 400
E
Sbjct: 512 GE 513
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS-----IQDAEIAFNK 272
+L C A GR++HA AVKA + + ++ + L+ Y + ++A F++
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 273 MP--ERNLVCWNAIIGGYAHQGHADMALSSFEEM--------TSMRC---------EAV- 312
+P +RN+ WN+++ YA G A + F EM T M EA+
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 313 -----------PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
P TL VLS+C+ A G K+ +S +K G+ V+++
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKV-HSFVVKLGLSSCVPVANSVLNMY 207
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
G+ G + A + + MP R ++S W A+++ G+ +L +N+
Sbjct: 208 GKCGDAETARAVFERMPER-SVSSWNAMVSLDAHLGRMDLALSLFENM 254
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/590 (40%), Positives = 342/590 (57%), Gaps = 19/590 (3%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK---TGLKDDAD 65
+ FT +F A + L GKQLH+ A++SG + DV CS DMY+K G DD
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 66 KMFDEMPERNLATWNAYISNAVLG-GRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSD 123
K+FD M + ++ +W A I+ + AI+ F + G EP+ TF + AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S ++G+Q+ G + G N SV N ++ + K + + A+ F+ + +KN VS+ +
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 184 LVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
L +N E ++ +T R GV F +S+LS A + + G +H+ VK
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSA--FTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ N V +AL+ MY KCGSI A FN M RN++ W ++I G+A G A L +F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 302 EEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+M E V PN VT V +LSACS G V +G + F SM + IKP EHYAC+VDL
Sbjct: 564 NQMIE---EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
L RAGL+ A+E I MP + + VW L ACRV+ ELG++AA + +LDPN+ +
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAY 680
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+ LSN++A G+WEE+ +R++MK+ + K GCSWI V ++IH F DT+H +I
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE----VGHHSEKIALAFGLIAIPPGVP 536
L +L E+K GY+PDT+ L+ +EEE E + HSEKIA+AFGLI+ P
Sbjct: 741 DELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRP 800
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+CGDCH+A K+IS + GRE+++RD NRFH F DG CSC+DYW
Sbjct: 801 VRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 13/397 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSK-TGLKDDAD 65
PND+ + + +A S G+ +K+G DV VGCS DM+ K ++A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD+M E N+ TW I+ + G P+ AI F+++ +G E D T + +AC++
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA---KVVFDGIIDKNDVSWCS 182
L LG+QLH + +RSG +V LVD Y KC+ G + VFD + D + +SW +
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 183 MLVVYVQNYE-EENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y++N +F +G VEP F SS AC ++ +G+ V A K
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N V ++++ M+ K ++DA+ AF + E+NLV +N + G + + A
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
E+T E + T +LS + G++ KG +I +S +K G+ ++ +
Sbjct: 462 LSEITER--ELGVSAFTFASLLSGVANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISM 518
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G +D A + M R IS W +++ +G
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHG 554
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 14/404 (3%)
Query: 1 MRRECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M R+ I P D TF L K+ GK +HA ++ D + S +YSK+G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 60 LKDDADKMFDEMP---ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
A+ +F+ M +R++ +W+A ++ GR +AI F+ G P+ + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKC-NEVGLAKVVFDGIID 174
+ ACS+ + +GR GFL+++G F+ +V V L+D + K N A VFD + +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N V+W M+ +Q + FL G E F +SSV SACA + L LG+ +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKC---GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
H+ A+++ + + V +LVDMY KC GS+ D F++M + +++ W A+I GY
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 292 GH-ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ A A++ F EM + + PN+ T AC G ++ K G+
Sbjct: 350 CNLATEAINLFSEMIT-QGHVEPNHFTFSSAFKACGNLSDPRVGKQVL-GQAFKRGLASN 407
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+ V+ + ++ ++ A + + + +S L CR
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 166/368 (45%), Gaps = 5/368 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTF FKA L P GKQ+ A K G + V S M+ K+ +DA
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ F+ + E+NL ++N ++ + A + TF + L+ ++
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++ G Q+H +V+ G N VCN L+ Y KC + A VF+ + ++N +SW SM+
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVE 244
+ ++ + F EGV+P + ++LSAC+ + + G R +++ ++
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +VD+ + G + DA N MP + +++ W +G + ++ + +
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+ + Y+ L + AC AG E+ ++ M + +K G + V D + +
Sbjct: 669 ILELDPNEPAAYIQLSNIY-AC--AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 364 AGLVDRAY 371
+ D A+
Sbjct: 726 FYVGDTAH 733
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 337/585 (57%), Gaps = 11/585 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN++ F A S G Q H L K G + +V + MYS+ + A ++
Sbjct: 115 PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQV 174
Query: 68 FDEMPER---NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE---PDLITFCAFLNAC 121
D +P ++ ++N+ ++ V GR + A++ LRR E D +T+ + C
Sbjct: 175 LDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEV---LRRMVDECVAWDHVTYVGVMGLC 231
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ LQLG ++H L+R G + V + L+D YGKC EV A+ VFDG+ ++N V W
Sbjct: 232 AQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ Y+QN E +F REG P ++ + +L+ACA IA L G +HA K
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ ++ V +AL++MY K GSI + F M R+++ WNA+I GY+H G AL F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M S E PNYVT + VLSA S G V++G + + I+PG EHY C+V LL
Sbjct: 412 QDMVS--AEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALL 469
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
RAGL+D A +K ++ + W LLNAC V+ +LGR A+++ ++DP+D G +
Sbjct: 470 SRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYT 529
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSNM+A RW+ +RK M++ IKK G SW+ ++N IH+F ++ ++H + +I
Sbjct: 530 LLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYK 589
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ +L +K GY+P+ L+DVE+E+K + +HSEK+ALA+GL+ IP PIRI K
Sbjct: 590 KVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIK 649
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCH+A K IS + R +IVRD NRFH F DG C+C D+W
Sbjct: 650 NLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 178/369 (48%), Gaps = 11/369 (2%)
Query: 29 GKQLHALALKSGQIHD---VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
GK +HA L Q + + S +Y K G A +FD MP RN+ +WN ++
Sbjct: 31 GKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAG 90
Query: 86 AVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
+ GG + F N+ P+ F L+ACS ++ G Q HG L + G
Sbjct: 91 YLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVC 150
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK--NDV-SWCSMLVVYVQNYEEENGCQMFL 201
+ V + LV Y +C+ V LA V D + + ND+ S+ S+L V++ E ++
Sbjct: 151 HQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLR 210
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
E V V+ CA+I L+LG VHA ++ + + FVGS L+DMYGKCG
Sbjct: 211 RMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCG 270
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
+ +A F+ + RN+V W A++ Y G+ + +L+ F M R +PN T +
Sbjct: 271 EVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMD--REGTLPNEYTFAVL 328
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L+AC+ A+ G + ++ K G K ++++ ++G +D +Y + +M R
Sbjct: 329 LNACAGIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRD 387
Query: 382 TISVWGALL 390
I+ W A++
Sbjct: 388 IIT-WNAMI 395
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 6/354 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M EC++ + T+ + + + G ++HA L+ G + D FVG DMY K G
Sbjct: 212 MVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGE 271
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +FD + RN+ W A ++ + G + +++ F + R G P+ TF LNA
Sbjct: 272 VLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNA 331
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L+ G LH + + GF +V V N L++ Y K + + VF +I ++ ++W
Sbjct: 332 CAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITW 391
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ Y + + Q+F P VLSA + + ++ G ++ +
Sbjct: 392 NAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMR 451
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER--NLVCWNAIIGGYAHQGHADMA 297
+E + + +V + + G + +AE F K + ++V W ++ + D+
Sbjct: 452 NFKIEPGLEHYTCMVALLSRAGLLDEAE-NFMKTTQVKWDVVAWRTLLNACHVHRNYDLG 510
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
E + M V Y L + + R V K+ +K +PGA
Sbjct: 511 RRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKK--EPGA 562
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 159/342 (46%), Gaps = 22/342 (6%)
Query: 121 CSDCSLLQLGRQLHG-FLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C+D L G+ +H FL+R + ++S N LV Y KC ++GLA+ +FD + +N
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW ++ Y+ +F + P +++ ++ LSAC+ ++ G H
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER---NLVCWNAIIGGYAHQGH 293
+ K + + +V SALV MY +C ++ A + +P ++ +N+++ G
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ A+ M C A ++VT V V+ C++ ++ G+++ ++ L+ G+
Sbjct: 202 GEEAVEVLRRMVD-ECVA-WDHVTYVGVMGLCAQIRDLQLGLRV-HARLLRGGLMFDEFV 258
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK-L 412
+ ++D+ G+ G V A + + R + VW AL+ A G E + NLF +
Sbjct: 259 GSMLIDMYGKCGEVLNARNVFDGLQNRNVV-VWTALMTAYLQNGYFE----ESLNLFTCM 313
Query: 413 D-----PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
D PN+ VLL N A DL+ ++ +G K
Sbjct: 314 DREGTLPNEYTFAVLL-NACAGIAALRHGDLLHARVEKLGFK 354
>gi|326507562|dbj|BAK03174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 335/586 (57%), Gaps = 15/586 (2%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDV-----FVGCSAFDMYSKTGLKDDADK 66
T L A SA G+QLH LK G + V + Y++ L + + +
Sbjct: 17 TLAELLVALSAARALPKGQQLHGHLLKGGHLPAVASSHALLAHHLLTFYARCSLPELSLR 76
Query: 67 MFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITFCAFLNACS 122
F ++P + A W++ IS+ G P A DAF + G + + + A +
Sbjct: 77 AFLDLPASPSPAAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPPAAKAVAAAA 136
Query: 123 DCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
D S L LHG ++ F G+V V + ++D Y KC + A+ VFD + ++N VSW
Sbjct: 137 DSSRPPLAPHALHGLASKTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVVSWS 196
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ Y + +F +A E V+ DF +S ++ CA ELG VHA ++K
Sbjct: 197 ALIGGYADAGMHPSALCIFRSALEEAVQVNDFTVSCIVRVCAAATLFELGAQVHARSIKT 256
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++ + FVGS+LV +Y KCG + A F+ PERNL WNA++ A GH A F
Sbjct: 257 ALDASPFVGSSLVSLYSKCGLVDCAYRVFSAAPERNLGIWNAVLIASAQHGHTSTA---F 313
Query: 302 EEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
E T M+ PN++T +C+L+ACS AG V++G K ++S+ +Y I+P EHYA +VDL
Sbjct: 314 ERFTKMQHAGFRPNFITFLCLLTACSHAGLVDEG-KRYFSLMKEYRIEPEVEHYAAMVDL 372
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR G + A ++I+ MPM P SVWGALL ACR++ + IAA LF+ SG H
Sbjct: 373 LGRVGRITEALDLIESMPMEPPDSVWGALLMACRMFKDADTAAIAAKRLFETGSRSSGAH 432
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLS+ +AA GR +A L RK M+D GI+K G SW+ +H F + H R+ EI
Sbjct: 433 MLLSSTYAAAGRHVDAALARKAMRDAGIRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIY 492
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+L K+ E+M AGY+ DT+ + DV+ +EK +G+HSE++A+A GL+ +P GVPIR+
Sbjct: 493 NVLEKVGEKMAVAGYVADTSAVVKDVDRDEKCASLGYHSERLAIALGLLIVPEGVPIRVM 552
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K++S GR V++RDN RFHRF DG CSC D+W
Sbjct: 553 KNLRVCDDCHNAVKYLSKCTGRVVVLRDNRRFHRFEDGLCSCGDFW 598
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT C+ + +A + G Q+HA ++K+ FVG S +YSK GL D
Sbjct: 221 EAVQVNDFTVSCIVRVCAAATLFELGAQVHARSIKTALDASPFVGSSLVSLYSKCGLVDC 280
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F PERNL WNA + + G A + F ++ G P+ ITF L ACS
Sbjct: 281 AYRVFSAAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQHAGFRPNFITFLCLLTACSH 340
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + + V +VD G+ + A + + + ++ D W +
Sbjct: 341 AGLVDEGKRYFSLMKEYRIEPEVEHYAAMVDLLGRVGRITEALDLIESMPMEPPDSVWGA 400
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPK 211
+L+ C+MF A + K
Sbjct: 401 LLM----------ACRMFKDADTAAIAAK 419
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 333/582 (57%), Gaps = 4/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+S + T + A + L G + LA K G DV+V +YSK G
Sbjct: 210 LSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGR 269
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD++ + +L ++NA IS ++A+ F L +G + T + +
Sbjct: 270 ILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFN 329
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LQL R + ++ G SV L Y + NEV A+ +FD +K+ SW +M+
Sbjct: 330 HLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMIS 389
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN + +F + + P ++S+LSACA++ L +G+ VH + +E
Sbjct: 390 GYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLES 448
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++V +ALVDMY KCGSI +A F+ M ++N+V WNA+I GY GH AL F EM
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM- 507
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ P VT + +L ACS +G V +G +IF+SM YG +P +EHYAC+VD+LGRAG
Sbjct: 508 -LQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAG 566
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ A E I+ MP+ P +VWGALL AC ++ E+ +A+ LF+LDP + G +VLLSN
Sbjct: 567 QLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSN 626
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+++ + +A VR+ +K + K GC+ I + ++ ++F + D SH + T I ML K
Sbjct: 627 IYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEK 686
Query: 486 LREEMKAAGYIPDT-NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +M+ AGY +T AL+DVE+EEK V HSEK+A+AFGLI+ PG IRI KNLR
Sbjct: 687 LTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLR 746
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+A KFIS I R ++VRD NRFH F +G CSC DYW
Sbjct: 747 VCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 5/396 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
++ + P++FT+ A+S L G LHA ++ G ++FVG + D+Y K
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A K+FD MPER+ WN IS +++I F+++ G D T L A
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ +LG + + G +V V GL+ Y KC + +++FD I + +S+
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ Y N+E E+ +F G + ++ L+L R + +++K
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ V +AL +Y + +Q A F++ PE++L WNA+I GY G D A+S F
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+EM + PN VT+ +LSAC++ GA+ G K + + ++ +VD+
Sbjct: 405 QEMMP---QLSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMY 460
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A ++ M + ++ W A++ ++G
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVT-WNAMITGYGLHG 495
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 180/377 (47%), Gaps = 16/377 (4%)
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSDC 124
++F+++ + +L +N I G PK++I + +LR+ T PD T+ ++A S
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++G LH + G N+ V + +VD Y K LA+ VFD + +++ V W +M+
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
+ +N E+ ++F+ G+ +++VL+A A + LG + +A K +
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH 246
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+++V + L+ +Y KCG I F+++ + +L+ +NA+I GY + A++ F E+
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ N TLV ++ ++ ++ +++LK GI + + R
Sbjct: 307 LASGQRV--NSSTLVGLIPVYLPFNHLQLS-RLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
V A ++ E P + +++ W A+++ Y + L A ++ P S N V ++
Sbjct: 364 NEVQFARQLFDESPEK-SLASWNAMISG---YTQNGLTDRAISLFQEMMPQLSPNPVTVT 419
Query: 425 NMFAA--------TGRW 433
++ +A G+W
Sbjct: 420 SILSACAQLGALSIGKW 436
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 333/582 (57%), Gaps = 4/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+S + T + A + L G + LA K G DV+V +YSK G
Sbjct: 210 LSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGR 269
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD++ + +L ++NA IS ++A+ F L +G + T + +
Sbjct: 270 ILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFN 329
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LQL R + ++ G SV L Y + NEV A+ +FD +K+ SW +M+
Sbjct: 330 HLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMIS 389
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN + +F + + P ++S+LSACA++ L +G+ VH + +E
Sbjct: 390 GYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLES 448
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N++V +ALVDMY KCGSI +A F+ M ++N+V WNA+I GY GH AL F EM
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM- 507
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ P VT + +L ACS +G V +G +IF+SM YG +P +EHYAC+VD+LGRAG
Sbjct: 508 -LQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAG 566
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ A E I+ MP+ P +VWGALL AC ++ E+ +A+ LF+LDP + G +VLLSN
Sbjct: 567 QLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSN 626
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+++ + +A VR+ +K + K GC+ I + ++ ++F + D SH + T I ML K
Sbjct: 627 IYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEK 686
Query: 486 LREEMKAAGYIPDT-NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
L +M+ AGY +T AL+DVE+EEK V HSEK+A+AFGLI+ PG IRI KNLR
Sbjct: 687 LTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLR 746
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+A KFIS I R ++VRD NRFH F +G CSC DYW
Sbjct: 747 VCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 186/392 (47%), Gaps = 5/392 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FT+ A+S L G LHA ++ G ++FVG + D+Y K + A
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD MPER+ WN IS +++I F+++ G D T L A ++
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LG + + G +V V GL+ Y KC + +++FD I + +S+ +M+
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y N+E E+ +F G + ++ L+L R + +++K +
Sbjct: 289 GYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIIL 348
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
V +AL +Y + +Q A F++ PE++L WNA+I GY G D A+S F+EM
Sbjct: 349 QPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM 408
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ PN VT+ +LSAC++ GA+ G K + + ++ +VD+ + G
Sbjct: 409 P---QLSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ A ++ M + ++ W A++ ++G
Sbjct: 465 SIVEARQLFDLMVDKNVVT-WNAMITGYGLHG 495
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 180/377 (47%), Gaps = 16/377 (4%)
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSDC 124
++F+++ + +L +N I G PK++I + +LR+ T PD T+ ++A S
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++G LH + G N+ V + +VD Y K LA+ VFD + +++ V W +M+
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
+ +N E+ ++F+ G+ +++VL+A A + LG + +A K +
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH 246
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+++V + L+ +Y KCG I F+++ + +L+ +NA+I GY + A++ F E+
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ N TLV ++ ++ ++ +++LK GI + + R
Sbjct: 307 LASGQRV--NSSTLVGLIPVYLPFNHLQLS-RLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
V A ++ E P + +++ W A+++ Y + L A ++ P S N V ++
Sbjct: 364 NEVQFARQLFDESPEK-SLASWNAMISG---YTQNGLTDRAISLFQEMMPQLSPNPVTVT 419
Query: 425 NMFAA--------TGRW 433
++ +A G+W
Sbjct: 420 SILSACAQLGALSIGKW 436
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 340/617 (55%), Gaps = 40/617 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ ++ +F+ + + G+Q HA + G + F+ MY+ +G D A +
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNA---IDAFINLRRTGGEPDLITFCAFLNACSDC 124
FD + + +N+ I G ++A+ + G D T L +C+D
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII----------- 173
S + +GR +HG +R G +G+ V L+D Y KC +G A+ +FD +I
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254
Query: 174 --------------------DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PK 211
+N VSW +M+ Y QN E +F ++G E P
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
I SVL ACA+ A LE GR +H A + N V +AL MY KC S+ +A F+
Sbjct: 315 WVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFD 374
Query: 272 KMPE--RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+ + +NL+ WN +I YA G A+S FE M +R P+ VT + +LS CS +G
Sbjct: 375 MIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENM--LRAGVQPDAVTFMGLLSGCSHSG 432
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++ G+ F M + ++P EHYACVVDLLGRAG + A E+I +MPM+ SVWGAL
Sbjct: 433 LIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGAL 492
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR + E+ +AA LF L+P++SGN+VLLSN++A G WEE +R +K G+K
Sbjct: 493 LAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMK 552
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCSWI + + H+F D SH + EI L L E++K AGYIPDT+F L+D+ EE
Sbjct: 553 KSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEE 612
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK + HSEK+A+AFGL+ PGV +R+TKNLRICGDCH+A KFIS I RE+IVRD
Sbjct: 613 EKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDL 672
Query: 570 NRFHRFWDGYCSCSDYW 586
NRFH F DG CSC DYW
Sbjct: 673 NRFHCFKDGSCSCGDYW 689
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 340/579 (58%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + +A L GK +H + SG D +MY+K G + ++
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F M ++ +WN+ I+ + G A+ F + +T +PD +T+ L+ + L
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 432
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG++LH L + GF+ N+ V N LVD Y KC E+G + VF+ + ++ ++W +++
Sbjct: 433 HLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 492
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V + + G +M R EGV P + S+L C+ +A G+ +H K +E ++
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 552
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
VG+ L++MY KCGS++++ F M +++V W A+I G A+ +F EM +
Sbjct: 553 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA- 611
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
VP++V V ++ ACS +G VE+G+ F+ M Y I+P EHYACVVDLL R+ L+
Sbjct: 612 -AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 670
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D+A + I MP++P S+WGALL+ACR+ G E+ ++ + +L+P+D+G +VL+SN++
Sbjct: 671 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIY 730
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA G+W++ +RK +K G+KK GCSW+ ++N++++F E+ E+ +L L
Sbjct: 731 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLA 790
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
M GYI + F L+D++E+EK + HSE++A+AFGL+ PG P+++ KNLR+C
Sbjct: 791 GLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCE 850
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+ K+IS IV RE++VRD NRFH F DG CSC DYW
Sbjct: 851 DCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 194/392 (49%), Gaps = 6/392 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+R + P+ +TFP + A + L K +H L G D+++G + DMY +
Sbjct: 107 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDL 166
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A K+F+EMP R++ +WN+ IS G A++ + R G PD T + L AC
Sbjct: 167 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRAC 226
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ G +HG + + G +V V NGL+ Y K N + + +FD ++ ++ VSW
Sbjct: 227 GGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWN 286
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ Y Q E ++F+ + +P I+S+L AC + LE G+ VH + +
Sbjct: 287 TMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITS 345
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
E + + L++MY KCG++ ++ F+ M ++ V WN++I Y G D A+ F
Sbjct: 346 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 405
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+ M+ + P+ VT V +LS ++ G + G ++ + K G +VD+
Sbjct: 406 K---MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA-KMGFNSNIVVSNTLVDMY 461
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ G + + ++ + M R I+ W ++ +C
Sbjct: 462 AKCGEMGDSLKVFENMKARDIIT-WNTIIASC 492
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 196/425 (46%), Gaps = 16/425 (3%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD-EM 71
F + +A ++ +LH+L + G H V Y+ + +F
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P N+ WN+ I G A+ + +R +PD TF + +NAC+ ++ +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+H ++ GF ++ + N L+D Y + N++ A+ VF+ + ++ VSW S++ Y N
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+++ R GV P + +SSVL AC + +E G +H + K ++ ++ V +
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
L+ MY K + D F+KM R+ V WN +I GY+ G + ++ F EM + +
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN---QF 312
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ +T+ +L AC G +E G + Y +T Y A + ++++ + G + +
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLAS 370
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN----DSGNHVLLSNM 426
E+ M + ++S W +++N G + A LFK+ DS +V+L +M
Sbjct: 371 QEVFSGMKCKDSVS-WNSMINVYIQNGSFD----EAMKLFKMMKTDVKPDSVTYVMLLSM 425
Query: 427 FAATG 431
G
Sbjct: 426 STQLG 430
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 2/346 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ T+ L S+ L GK+LH K G ++ V + DMY+K G
Sbjct: 407 MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGE 466
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K+F+ M R++ TWN I++ V + +R G PD+ T + L
Sbjct: 467 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 526
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + + G+++HG + + G + +V V N L++ Y KC + + VF + K+ V+W
Sbjct: 527 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 586
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ E + + F G+ P +++ AC+ +E G + H +
Sbjct: 587 TALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKK 646
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
+E I + +VD+ + + AE MP + + W A++ G ++A
Sbjct: 647 DYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAE 706
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
E + + + YV + + +A + V K + LK
Sbjct: 707 RVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLK 752
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ + SS+ A A A +H++ + + ++ + L+ Y +D +F
Sbjct: 12 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDPTSSF 68
Query: 271 NKM----PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ P N+ WN+II H G ALS + E +R + P+ T V++AC
Sbjct: 69 SVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQ--PDTYTFPSVINAC- 125
Query: 327 RAGAVEKGM-KIFYSMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AG ++ M K + L G G++ Y ++D+ R +D+A ++ +EMP+R +
Sbjct: 126 -AGLLDFEMAKSIHDRVLDMGF--GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV 182
Query: 384 SVWGALL---NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
S W +L+ NA + + NL + + + + VL + G EE D++
Sbjct: 183 S-WNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA--CGGLGSVEEGDIIH 239
Query: 441 KEMKDVGIKK 450
++ +GIKK
Sbjct: 240 GLIEKIGIKK 249
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 329/579 (56%), Gaps = 42/579 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FT+P LFKA S G+Q+H +K G DV + + MY+ G +DA KM
Sbjct: 130 PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKM 189
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F GE D++ + ++ C +L
Sbjct: 190 F------------------------------------YSGESDVVCWNTMIDGYLKCGVL 213
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ + L + N+ N +++ K +G A+ +FD + +++++SW SM+ Y
Sbjct: 214 EAAKGLFAQMPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + ++F +RE P F++SSVL+AC+ I ++ GR VHA + ++ +
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+AL+DMY KCG + F +M ER + WNA+IGG A G A+ AL F ++
Sbjct: 330 VLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEG 389
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R + PN +TLV VL+AC+ AG V+KG++IF +M YG+ P EHY C+VDLLGR+GL
Sbjct: 390 RMK--PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
A ++I MPM+P +VWGALL ACR++G +L L +L+P +SG +VLLSN++
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A GR+++ +RK MK+ GIK G S + + +H F+ D SH + EI L ++
Sbjct: 508 AKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
E ++ AG+ PDT+ L+D++EEEK T V +HSEK+A+AFGLI PG I I KNLR+C
Sbjct: 568 ERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCD 627
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSA K IS I RE+IVRD R+H F +G CSC D+W
Sbjct: 628 DCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 134/339 (39%), Gaps = 72/339 (21%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCSML 184
LQ QLH ++RSG + V L+ Y + A VF I + N W ++
Sbjct: 46 LQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105
Query: 185 VVYVQNYEEENGC----QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++N + +M + AR P F ++ AC+ ++ GR +H VK
Sbjct: 106 KGCLENNKLFKAIYFYGRMVIDAR-----PNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDA---------------------------EIA---F 270
+ ++ + SA + MY G ++DA E A F
Sbjct: 161 HGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS------------------------ 306
+MP +N+ WN +I G A G+ A F+EM+
Sbjct: 221 AQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 307 -----MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
R E P L VL+ACS GA+++G + ++ + IK A ++D+
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTALLDMY 339
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G +D +E+ +EM R I W A++ ++G+ E
Sbjct: 340 AKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAIHGRAE 377
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE P F + A S + G+ +HA ++ D +G + DMY+K G
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++F+EM ER + TWNA I + GR ++A++ F L+ +P+ IT L A
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 121 CSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C+ + G R G D + +VD G+ A+ + + + + N
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464
Query: 179 SWCSML 184
W ++L
Sbjct: 465 VWGALL 470
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/575 (40%), Positives = 325/575 (56%), Gaps = 2/575 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T + A++ L G + LALK G +V +YSK G + A +F +
Sbjct: 211 TVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRI 270
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+L +NA IS G + ++ F L +G T + S L L
Sbjct: 271 NRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC 330
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+HGF V+SG N +V Y K NE+ LA+ +FD +K V+W +M+ Y QN
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E +F + P I+++LSACA++ L G+ VH + +E NI+V +
Sbjct: 391 STETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVST 450
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVDMY KCG+I +A F+ M E+N V WN +I GY G+ AL + EM +
Sbjct: 451 ALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYN- 509
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P+ VT + VL ACS AG V +G +IF++M KY I+P EHYAC+VD+LGR+G +++A
Sbjct: 510 -PSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKAL 568
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
E IK+MP+ P +VWG LL AC ++ ++ R+A++ LF+LDP G +VLLSN+++
Sbjct: 569 EFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVER 628
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+ +A +R+ +K + K GC+ I V H+F + D SH T+I A L KL +M+
Sbjct: 629 NFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMR 688
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY +T AL+DVEEEEK V HSEK+A+AFGLI PG IRI KNLR+C DCH+
Sbjct: 689 EMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHT 748
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A KFIS I R ++VRD NRFH F DG CSC DYW
Sbjct: 749 ATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 190/397 (47%), Gaps = 9/397 (2%)
Query: 2 RRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
R +SP++FT+ A S+ H+ + LHA ++ G +VFVG + D+Y K
Sbjct: 103 RNTNLSPDNFTYAFAVAACSNDKHLML----LHAHSIIDGYGSNVFVGSALVDLYCKFSR 158
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A K+FD MPER+ WN I+ V ++I F + G D T A L A
Sbjct: 159 VVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ L++G + ++ GF V GL+ Y KC +V A+++F I + +++
Sbjct: 219 AAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAY 278
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + N E ++F G I ++ + L L S+H VK
Sbjct: 279 NAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVK 338
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + N V +A +Y K I A F++ PE+ +V WNA+I GY G + A+S
Sbjct: 339 SGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISL 398
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM M+ E PN VT+ +LSAC++ G++ G K + + ++P +VD+
Sbjct: 399 FKEM--MKTEFTPNAVTITTILSACAQLGSLSFG-KWVHHLIKSENLEPNIYVSTALVDM 455
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A+++ M + T++ W ++ ++G
Sbjct: 456 YAKCGNISEAWQLFDSMSEKNTVT-WNTMIFGYGLHG 491
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +PN T + A + L GK +H L +++V + DMY+K G
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGN 461
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++FD M E+N TWN I L G A+ + + G P +TF + L A
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
CS L+ G ++ H + + + + +VD G+ ++
Sbjct: 522 CSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQL 564
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 330/557 (59%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH +LK ++D + + Y+K G A ++F + + L +WNA I
Sbjct: 399 KELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQS 458
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ ++DA + ++ +G PD T C+ L+ACS L+LG+++HGF++R+ + ++ V
Sbjct: 459 SDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 518
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++ Y C E+ +V+FD + D + VSW +++ ++QN E +F G++
Sbjct: 519 LSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQ 578
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + +V AC+ + L LGR HA A+K +E N F+ +++DMY K G+I +
Sbjct: 579 PCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKV 638
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
FN + E++ WNA+I GY G A A+ FEEM R P+ +T + VL+AC+ +G
Sbjct: 639 FNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQ--RTGRNPDDLTFLGVLTACNHSG 696
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ +G++ M +G+KP +HYACV+D+LGRAG +D A + EM P + +W +L
Sbjct: 697 LLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSL 756
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L+ CR++ E+G A LF L+P N+VLLSN++A G+W++ VR+ MK++ ++
Sbjct: 757 LSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLR 816
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K AGCSWI + ++ F + + EI+++ + L ++ GY PDT+ +D+ EE
Sbjct: 817 KDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEE 876
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK+ ++ HSEK+A+ +GLI G +R+ KNLRIC DCH+A K IS ++ RE++VRDN
Sbjct: 877 EKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 936
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F G+CSC DYW
Sbjct: 937 KRFHHFNKGFCSCGDYW 953
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 191/411 (46%), Gaps = 20/411 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FTFPC+ KA + + G +H L +K+G + D+FVG + Y G DA K+
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKL 244
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MPERNL +WN+ I G AF+ PD+ T L C+ +
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGDD----GAFM--------PDVATVVTVLPVCAREREI 292
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+G+ +HG+ V+ D + V N L+D Y K + ++++F +KN VSW +M+ +
Sbjct: 293 GVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF 352
Query: 188 VQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ + + A E V+ + I + + C + L + +H ++K
Sbjct: 353 SAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVY 412
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +A V Y KCGS+ A+ F+ + + L WNA+IGGYA ++L + +M
Sbjct: 413 DELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMK 472
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ +P+ T+ +LSACS+ ++ G ++ + ++ ++ Y V+ L G
Sbjct: 473 N--SGLLPDNFTVCSLLSACSKLKSLRLGKEV-HGFIIRNWLERDLFVYLSVLSLYIHCG 529
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE--LGRIAADNLFKLDP 414
+ + M +S W ++ G PE LG L+ + P
Sbjct: 530 ELCTVQVLFDAMEDNSLVS-WNTVITGHLQNGFPERALGLFRQMVLYGIQP 579
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 180/376 (47%), Gaps = 8/376 (2%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
GK +H A+K ++ V + DMYSK G D+ +F +N+ +WN +
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353
Query: 88 LGGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G D + G E D +T + C D S+L ++LH + ++ F
Sbjct: 354 AEGDIHGTFDLLRQML-AGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVY 412
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ + N V Y KC + A+ VF GI K SW +++ Y Q+ + L +
Sbjct: 413 DELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMK 472
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G+ P +F + S+LSAC+++ L LG+ VH ++ +E ++FV +++ +Y CG +
Sbjct: 473 NSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 532
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
++ F+ M + +LV WN +I G+ G + AL F +M + P ++++ V A
Sbjct: 533 TVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQ--PCGISMMTVFGA 590
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS ++ G + ++ LK+ ++ A ++D+ + G + ++ ++ + + S
Sbjct: 591 CSLLPSLRLGREA-HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS 649
Query: 385 VWGALLNACRVYGKPE 400
W A++ ++G+ +
Sbjct: 650 -WNAMIMGYGMHGRAK 664
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPER 74
L +AS G+++H L S ++ V C+ MY+ G DD+ FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
NL WNA IS+ ++ FI + +T PD TF + AC+ S + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
HG +V++G ++ V N LV FYG V A +FD + ++N VSW SM+ V+ N
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN--G 267
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
++G M P + +VL CAR + +G+ VH AVK ++ + V +AL
Sbjct: 268 DDGAFM----------PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNAL 317
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+DMY K G I D+++ F +N+V WN ++GG++ +G +M + +
Sbjct: 318 MDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKA 377
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ VT++ + C +V +K + +LK V + G + A +
Sbjct: 378 DEVTILNAVPVCFDE-SVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPEL 401
+ + T++ W AL+ P L
Sbjct: 437 FHGIRSK-TLNSWNALIGGYAQSSDPRL 463
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 157/346 (45%), Gaps = 2/346 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P++FT L A S L GK++H +++ D+FV S +Y G
Sbjct: 471 MKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 530
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+FD M + +L +WN I+ + G P+ A+ F + G +P I+ A
Sbjct: 531 LCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGA 590
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+LGR+ H + ++ + N + ++D Y K + + VF+G+ +K+ SW
Sbjct: 591 CSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASW 650
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M++ Y + + ++F +R G P D VL+AC L G R + +
Sbjct: 651 NAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKS 710
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ N+ + ++DM G+ G + +A +A E ++ WN+++ + +M
Sbjct: 711 SFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGE 770
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + E NYV L + + + V + + M+L+
Sbjct: 771 KVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLR 816
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEGNIFVG 250
++E+ +FL R + +L A + +E+GR +H V+ + + +
Sbjct: 72 DDESSSDVFLLVREA--------LGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLC 123
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ ++ MY CGS D+ AF+ + +NL WNA+I Y+ L F +M S +
Sbjct: 124 TRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMIS-KTH 182
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+P+ T CV+ AC+ V G+ + + + +K G+ +V G G V A
Sbjct: 183 LLPDNFTFPCVIKACAGISDVGIGLAV-HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDA 241
Query: 371 YEIIKEMPMRPTISVWGALL 390
++ MP R +S W +++
Sbjct: 242 LKLFDIMPERNLVS-WNSMI 260
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/595 (38%), Positives = 336/595 (56%), Gaps = 38/595 (6%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P P + L KQ+HA +K+ H + + + F +GL A
Sbjct: 72 NPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDF----PSGLSPSAQ- 126
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
WN I++ +P+NA++ + LR+ E D + L AC S
Sbjct: 127 ------------WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSW 174
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
QLG+++HGF+++ G D +V V N L+ YG+C V A++VFD +++++ VSW
Sbjct: 175 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTA 234
Query: 187 YVQNYEEENGCQMFLTARR--EGVEPKDFMI-SSVLSACARIAGLELGRSVH-------- 235
+ Y + C AR+ G+ K + +++++ C R LE G +
Sbjct: 235 LLDMYAK---CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENI 291
Query: 236 -----AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
+ K VE + + +ALVDMY KCG I A F + R++ WNAII G+A
Sbjct: 292 FPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAM 351
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G+ + AL F EM R PN +T + +L ACS AG V +G K+F M +G+ P
Sbjct: 352 HGYGEEALDIFAEME--RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 409
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHY C+VDLLGRAGL+D A+E+IK MP++P VWGAL+ ACR++ P+LG +AA L
Sbjct: 410 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL 469
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+++P + G +VL+SN++AA RW +A VRK MK VG+KK G S I V +H F D
Sbjct: 470 EIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD 529
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH + I ML ++R ++ AGY+PDT+ L +++EEEK T + +HSEK+A+AFGLI+
Sbjct: 530 QSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLIS 589
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
P PIRI KNLR+C DCH+A K +S I GR +IVRD NRFH F +GYCSC DY
Sbjct: 590 TAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 34/362 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ ++F P + KA + GK++H LK G DVFVG + MY +
Sbjct: 150 LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 209
Query: 61 KDDADKMFDEMPERNLATW----NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
+ A +FD+M ER++ +W A + G A F L + ++++ A
Sbjct: 210 VEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGL----TQKTVVSWTA 265
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCN------------GLVDFYGKCNEVG 163
+ C + L+ G +L + F +++ N LVD Y KC ++
Sbjct: 266 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDIN 325
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A +F I ++ W +++ + + E +F R+GV+P D +L AC+
Sbjct: 326 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 385
Query: 224 RIAGLELGRS-----VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERN 277
+ G+ VH + +E +VD+ G+ G + +A MP + N
Sbjct: 386 HAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCMVDLLGRAGLLDEAHEMIKSMPIKPN 441
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKG 334
+ W A++ + + + ++ + E V + + +A +R A V K
Sbjct: 442 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 501
Query: 335 MK 336
MK
Sbjct: 502 MK 503
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/614 (36%), Positives = 335/614 (54%), Gaps = 30/614 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P+ + A + L + + + DV +G + DMY+K G
Sbjct: 250 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 309
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD M E+N+ +W+A I+ G+ + A+D F + +G PD IT + L A
Sbjct: 310 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 369
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +C L RQ+H G N+ V N LV FY + A +FDG+ ++ VSW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 181 CSMLVVYVQ----------------------NY------EEENGCQMFLTARREGVEPKD 212
M+ + + NY +F R EGV P
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +V+ ACA++ + R++ + + ++ +G+A++DM+ KCG ++ A F++
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M E+N++ W+A+I Y + G AL F M +R +PN +TLV +L ACS AG VE
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMM--LRSGILPNKITLVSLLYACSHAGLVE 607
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G++ F M Y ++ +HY CVVDLLGRAG +D A ++I+ M + +WGA L A
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CR + L AA +L +L P + G+++LLSN++A GRWE+ R M +KK
Sbjct: 668 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 727
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
G +WI V N+ H F DT+H R+ EI ML L +++ GY+PDTNF L+DV+EE K+
Sbjct: 728 GWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKI 787
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
+ HSEK+A+AFGLIA P PIRI KNLR+CGDCH+ K +S I GR +IVRD NRF
Sbjct: 788 GILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRF 847
Query: 573 HRFWDGYCSCSDYW 586
H F +G CSC DYW
Sbjct: 848 HHFKEGACSCGDYW 861
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 169/384 (44%), Gaps = 37/384 (9%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
DMY K +DA +FD+M ER+L TW I G+ ++ F +R G PD +
Sbjct: 201 DMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 260
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ AC+ + R + ++ R F +V + ++D Y KC V A+ +FD +
Sbjct: 261 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 320
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+KN +SW +M+ Y + + +F G+ P ++S+L AC L R
Sbjct: 321 EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVR 380
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VHA A + N+ V + LV Y ++ DA F+ M R+ V W+ ++GG+A G
Sbjct: 381 QVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 440
Query: 293 HADMALSSFEEMTSMRCEA----------------------------VPNYVTLVCVLSA 324
+F E+ +RC A VP+ V +V V+ A
Sbjct: 441 DYMNCFGTFREL--IRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 325 CSRAGAVEKGMKI-FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
C++ GA+ K I Y K+ + ++D+ + G V+ A EI M + I
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRMEEKNVI 556
Query: 384 SVWGALLNACRVYGKPELGRIAAD 407
S W A++ A YG GR A D
Sbjct: 557 S-WSAMIAA---YGYHGQGRKALD 576
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA A G + ++ V YS DDA +FD M R+ +W+ +
Sbjct: 98 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G N F L R G PD T + AC D LQ+
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA------------------- 198
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y KC E+ A+ +FD + +++ V+W M+ Y + + +F R EGV
Sbjct: 199 --LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + +V+ ACA++ + R + + + ++ +G+A++DMY KCG ++ A
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F++M E+N++ W+A+I Y + G AL F M S +P+ +TL +L AC
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS--SGMLPDKITLASLLYAC 370
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+++A +C L RQ+H G N+ V N L+ FY + A +FDG+ ++
Sbjct: 84 YISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 143
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW M+ + + + N F R G P ++ + V+ AC + L++
Sbjct: 144 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------ 197
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
ALVDMY KC I+DA F+KM ER+LV W +IGGYA G A+
Sbjct: 198 ---------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANE 242
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
+L FE+M VP+ V +V V+ AC++ GA+ K +I + +
Sbjct: 243 SLVLFEKMREE--GVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTA 299
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++D+ + G V+ A EI M + IS W A++ A YG GR A D LF++
Sbjct: 300 MIDMYAKCGCVESAREIFDRMEEKNVIS-WSAMIAA---YGYHGQGRKALD-LFRM 350
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/668 (33%), Positives = 352/668 (52%), Gaps = 84/668 (12%)
Query: 1 MRRECISPNDFTFPCLFKASS----------ALHIPVTGKQLHALALKSGQIHDVFVGCS 50
M+R P+ FTF + A S LH V + + + +V C+
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNL---------------------------------A 77
+ + + L A K+FDE P+ +
Sbjct: 190 SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDV 249
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS----LLQLGRQL 133
WNA IS V G + A D F + G + D T+ + ++AC C+ + GRQ+
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQV 309
Query: 134 HGFLVRSGFDGN----VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV- 188
HG+++R+ + + +SV N L+ FY K + + A+ VFD + ++ +SW ++L YV
Sbjct: 310 HGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVN 369
Query: 189 -QNYEE-----------------------------ENGCQMFLTARREGVEPKDFMISSV 218
Q EE E G ++F + EG+EP D+ +
Sbjct: 370 AQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGA 429
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
++AC+ + L+ G+ +H+ ++ + + G+AL+ MY +CG ++ AE F MP +
Sbjct: 430 ITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDS 489
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WNA+I A GH A+ FE+M M+ + +P+ +T + +L+AC+ AG +++G F
Sbjct: 490 VSWNAMIAALAQHGHGVKAIELFEQM--MKEDILPDRITFLTILTACNHAGLIKEGRHYF 547
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+M +YGI PG +HYA ++DLL RAG+ +A +IK MP +W ALL CR++G
Sbjct: 548 DTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGN 607
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
ELG AAD L +L P G +++LSNM+AA G+W+E VR M++ G+KK GCSW+
Sbjct: 608 MELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVE 667
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V+N +H+F D H + L +L EMK GY+PDT F L+D+E E K + H
Sbjct: 668 VENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTH 727
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+ +G++ +P G IR+ KNLRICGDCH+AFK+IS +V RE++VRD RFH F +G
Sbjct: 728 SEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNG 787
Query: 579 YCSCSDYW 586
CSC +YW
Sbjct: 788 ECSCGNYW 795
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 180/436 (41%), Gaps = 84/436 (19%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFIN 101
D+ + YS +G A ++F+ P R+ ++NA I+ G A++ F+
Sbjct: 70 DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129
Query: 102 LRRTGGEPDLITFCAFLNACS------------DCSLLQLGRQL---------------- 133
++R G PD TF + L+A S C +++LG L
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189
Query: 134 HGFLVRSG---------FDGNVS------VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
LV+S FD ++ Y + +++ A+ + DG+ DV
Sbjct: 190 SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDV 249
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA----RIAGLELGRSV 234
+W +M+ YV+ E F G++ ++ +S++SAC ++ GR V
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQV 309
Query: 235 HAVAVKACVEGN----IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
H ++ VE + + V +AL+ Y K + +A F+KMP R+++ WNA++ GY +
Sbjct: 310 HGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVN 369
Query: 291 QGHADMALSSFEEM----------------------------TSMRCEAV-PNYVTLVCV 321
+ A S F EM M+ E + P
Sbjct: 370 AQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGA 429
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
++ACS G+++ G +I +S ++ G G ++ + R G+V+ A + MP
Sbjct: 430 ITACSVLGSLDNGQQI-HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVD 488
Query: 382 TISVWGALLNACRVYG 397
++S W A++ A +G
Sbjct: 489 SVS-WNAMIAALAQHG 503
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
+ R+VHA + + + N F+ + L+++Y K +I A F+K+P+ ++V ++ Y+
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G+ +A +++ + + + V+ +++A S + +F M +YG P
Sbjct: 83 SSGNVKLA----QQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMK-RYGFLP 137
Query: 350 GAEHYACVVDLLG 362
++ V+ L
Sbjct: 138 DPFTFSSVLSALS 150
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/594 (39%), Positives = 339/594 (57%), Gaps = 18/594 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+ +T + A + G+QLH+L L+ G + D V C DMY+K +
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299
Query: 61 KDD---ADKMFDEMPERNLATWNAYISNAVL-GGRPKNAIDAFINLRRTGGEPDLITFCA 116
+ A K+F MP N+ +W A IS V GG+ NA++ + EP+ +T+ +
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC-NGLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC++ S GRQ+H ++++ GNV+V N LV Y + + A+ FD + ++
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSI-GNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP--KDFMISSVLSACARIAGLELGRS 233
N +S S + E +++ E ++ F +S+LSA A + G+
Sbjct: 419 NLLSTSS-------DIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQ 471
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQG 292
+HA+++K E + + ++LV MY +CG + DA AF++M + N++ W +II A G
Sbjct: 472 LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHG 531
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
HA+ ALS F +M + PN VT + VLSACS G V++G + F SM + + P E
Sbjct: 532 HAERALSLFHDM--ILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRME 589
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC+VDLL R+GLV A E I EMP + VW LL ACR Y E+G IAA ++ L
Sbjct: 590 HYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDL 649
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P D +VLLSN++A G W+E +R M+ + K G SW+ V N IH F+A DTS
Sbjct: 650 EPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTS 709
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R EI A L L E+K GY+PDT+ L+D+ ++ K + HSEKIA+AFGLI
Sbjct: 710 HPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTL 769
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P PIRI KNLR+C DCHSA K+IS GRE+I+RD+NRFHR DG CSC +YW
Sbjct: 770 PTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 11/365 (3%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNA 86
G+ LH L + + D V S MYSK G A ++FD M R+L +W A
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ-LGRQLHGFLVRSGFDG- 144
G + A+ + +G P+ T CA +AC L + G + GF +++GF G
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+VSV L+D + + ++ A+ VF+G++++ V W M+ YVQ ++FL
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+G EP + +SS++SACA LG+ +H++ ++ + + V LVDMY K Q
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 265 DAEIA---FNKMPERNLVCWNAIIGGYAH-QGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
E A F +MP N++ W A+I GY G + A+ EM + E PN++T
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIE--PNHLTYSS 359
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+L AC+ + G +I ++ +K I +V + +G ++ A + ++ R
Sbjct: 360 LLKACANLSDQDSGRQI-HARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418
Query: 381 PTISV 385
+S
Sbjct: 419 NLLST 423
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 20/324 (6%)
Query: 129 LGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVV 186
LGR LH L+ + D + V N L+ Y KC V A+ VFDG+ D VSW +M
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS----VHAVAVKAC 242
+N E+ + G+ P F + + AC G EL RS V A+K
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC--FPG-ELFRSSGGTVLGFAIKTG 177
Query: 243 VEG-NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
G ++ VG AL+DM+ + G + A FN + ER +V W +I Y G A A+ F
Sbjct: 178 FWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELF 237
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M E P+ T+ ++SAC+ G+ G ++ +S+ L+ G+ +VD+
Sbjct: 238 LGMLEDGFE--PDGYTMSSMVSACAEQGSAGLGQQL-HSLVLRLGLVSDTCVSCGLVDMY 294
Query: 362 GRAGL---VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK-LDPNDS 417
+ + ++ A ++ K MP +S W AL++ G E A + L + L+ +
Sbjct: 295 TKLQMEQSMECARKVFKRMPTHNVMS-WTALISGYVQCGGQE--NNAVELLCEMLNESIE 351
Query: 418 GNHVLLSNMFAATGRWEEADLVRK 441
NH+ S++ A + D R+
Sbjct: 352 PNHLTYSSLLKACANLSDQDSGRQ 375
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/612 (36%), Positives = 347/612 (56%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN +TFP L KA++ + G+ LH +A+KS DVFV S Y G D A K+
Sbjct: 131 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKV 190
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + E+++ +WN+ I+ V G P A++ F + + +T L+AC+ L
Sbjct: 191 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDL 250
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ GR++ ++ + + N+++ N ++D Y KC + AK +FD + +K++V+W +ML Y
Sbjct: 251 EFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 310
Query: 188 V--QNYE------------------------EENG--CQMFLTAR----REGVEPKDFMI 215
++YE E+NG + L ++ ++ +
Sbjct: 311 AISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITL 370
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
S LSACA++ LELGR +H+ K ++ N +V SAL+ MY KCG ++ A FN + +
Sbjct: 371 VSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEK 430
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R++ W+A+IGG A G A+ F +M + PN VT V ACS G V++
Sbjct: 431 RDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVK--PNGVTFTNVFCACSHTGLVDEAE 488
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+FY M YGI P +HYAC+VD+LGR+G +++A + I+ MP+ P+ SVWGALL AC++
Sbjct: 489 SLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 548
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ L +A L +L+P + G HVLLSN++A +G+W+ +RK M+ G+KK GCS
Sbjct: 549 HANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCS 608
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-KMTE 514
I + IH F + D +H + ++ L ++ E++K+ GY P+ + L +EEEE K
Sbjct: 609 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQS 668
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+ +GLI+ IR+ KNLR+CGDCH+ K IS + RE+IVRD RFH
Sbjct: 669 LNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHH 728
Query: 575 FWDGYCSCSDYW 586
F +G CSC+D+W
Sbjct: 729 FRNGQCSCNDFW 740
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 223/454 (49%), Gaps = 45/454 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK--DDADKMFDEMPERNLATWNAYISNAV 87
KQ HA +++G D + F + + + + A K+FDE+P+ N TWN I
Sbjct: 48 KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 88 LGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G P +I AF+++ + + P+ TF + A ++ S L LG+ LHG ++S +
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V N L+ Y C ++ A VF I +K+ VSW SM+ +VQ + ++F
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E V+ + VLSACA+I LE GR V + + V N+ + +A++DMY KCGSI+D
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287
Query: 266 AEIAF-------------------------------NKMPERNLVCWNAIIGGYAHQGHA 294
A+ F N MP++++V WNA+I Y G
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKP 347
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ AL F E+ ++ N +TLV LSAC++ GA+E G I +S K GIK
Sbjct: 348 NEALLVFHEL-QLQKNIKLNQITLVSTLSACAQVGALELGRWI-HSYIKKNGIKMNFYVT 405
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-D 413
+ ++ + + G +++A E+ + R + VW A++ ++G G A D +K+ +
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVEKR-DVFVWSAMIGGLAMHG---CGSEAVDMFYKMQE 461
Query: 414 PNDSGNHVLLSNMFAA---TGRWEEADLVRKEMK 444
N N V +N+F A TG +EA+ + +M+
Sbjct: 462 ANVKPNGVTFTNVFCACSHTGLVDEAESLFYKME 495
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I N T A + + G+ +H+ K+G + +V + MYSK G + A
Sbjct: 363 IKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAR 422
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ + +R++ W+A I + G A+D F ++ +P+ +TF ACS
Sbjct: 423 EVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 482
Query: 126 LLQLGRQL 133
L+ L
Sbjct: 483 LVDEAESL 490
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 333/559 (59%), Gaps = 5/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAF-DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ +H +K+ +H C+ DMY+K G+ D A +FD M R + TW + I+
Sbjct: 17 GRAVHGSGVKAC-VHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYA 75
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G AI F + R G PD+ T L+AC+ L+ G+ +H ++ + N+
Sbjct: 76 REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIF 135
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VCN L+D Y KC + A VF + K+ +SW +M+ Y +N +F E
Sbjct: 136 VCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE- 194
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++P ++ +L ACA +A L+ G+ VH ++ + V +ALVDMY KCG A
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLAR 254
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ F+ +P ++L+ W +I GY G + A+++F EM E P+ V+ + +L ACS
Sbjct: 255 LLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE--PDEVSFISILYACSH 312
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+G +++G + F M + +KP EHYAC+VDLL R+G + AY+ IK MP+ P ++WG
Sbjct: 313 SGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWG 372
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL+ CR++ +L A+++F+L+P ++G +VLL+N +A +WEE +R+++ G
Sbjct: 373 ALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRG 432
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK GCSWI VK+++HIF A ++SH + +I+ +L +LR +MK GY P T +AL + +
Sbjct: 433 LKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINAD 492
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+K T + HSEK+A+AFG++ +PP IR++KNLR+CGDCH KFIS +GRE+++R
Sbjct: 493 SLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLR 552
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DG C C +W
Sbjct: 553 DSNRFHHFKDGVCCCRGFW 571
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 154/282 (54%), Gaps = 5/282 (1%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L AC++C + LGR +HG V++ + CN L+D Y KC + A +VFD + +
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
V+W S++ Y + + ++F REGV P F I++VL ACA LE G+ VH
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ ++ NIFV +AL+DMY KCGS++DA F +MP ++++ WN +IGGY+ +
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
ALS F +M E P+ TL C+L AC+ ++++G ++ + L+ G +
Sbjct: 183 EALSLFGDMV---LEMKPDGTTLACILPACASLASLDRGKEV-HGHILRNGFFSDQQVAN 238
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+VD+ + G+ A + +P + I+ W ++ ++G
Sbjct: 239 ALVDMYVKCGVPVLARLLFDMIPTKDLIT-WTVMIAGYGMHG 279
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 3/335 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE +SP+ FT + A + GK +H ++ ++FV + DMY+K G
Sbjct: 90 MDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGS 149
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+ +F EMP +++ +WN I P A+ F ++ +PD T L A
Sbjct: 150 MEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPA 208
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+++HG ++R+GF + V N LVD Y KC LA+++FD I K+ ++W
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y + N F R+ G+EP + S+L AC+ L+ G V
Sbjct: 269 TVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQD 328
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
C V+ + + +VD+ + G + A MP E + W A++ G +A
Sbjct: 329 ECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAE 388
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E + + E YV L + + V+K
Sbjct: 389 KVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKK 423
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/588 (38%), Positives = 331/588 (56%), Gaps = 8/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SPN FTFP K+ +AL +P+TGKQLH K+G + + FV S MY K L
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 61 KDDADKMFDEMPERNLAT--WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
D+A K+FDE P+ T +N+ +S L R K+ + F +R G E + +T +
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C L LG +HGF V+ G D + SV N L+ Y K E+ + +FD + K +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +M+ Y QN N +++ +G P + VLS+CA + L +G+ V
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
N F+ +ALV+MY +CG+++ A F+ MP +++V W AIIGGY G ++A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM +R P+ V VLSACS AG KG+ F M KYG++PGAEHY+C+V
Sbjct: 301 GLFDEM--IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG ++ A E+I+ M +R ++WGALL AC+++ EL +A + + +L+P ++G
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN++ G E VR M+ +KK GCS++ K R+H+F A D +H + E
Sbjct: 419 YYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNE 478
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L +L +K + EE + +G HSEK+A+AF L+ I
Sbjct: 479 IYKKLNELENLVKDLDGCKKNDHE----RREEYLNSMGVHSEKLAVAFALLNTRKETEII 534
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLRICGDCH K +S IV R+ +VRD RFH F +G+CSC +YW
Sbjct: 535 IIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 333/586 (56%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FTF + KA + GKQ+H K G +VFV S MY+K G
Sbjct: 76 MQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQ 135
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD++ +R + +W + IS V G P A++ F +R+ +PD I + + A
Sbjct: 136 ISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTA 195
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ L G+ +HG + + G + + L Y K V +A+ F+ + N + W
Sbjct: 196 YTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILW 255
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N E ++F + + + S + A A++ LEL R + K
Sbjct: 256 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 315
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + FV + L+DMY KCGSI A F+++ ++++V W+ +I GY GH A+
Sbjct: 316 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 375
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ EM + PN T + +L+AC +G V++G ++F+ M +GI+P +HY+CVVDL
Sbjct: 376 YNEMK--QAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDL 432
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +++AY+ I MP++P +SVWGALL+AC+++ K LG IAA+ LF LDP ++G++
Sbjct: 433 LGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHY 492
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++A+ W VR M G+ K G S I + + FQ D SH ++ EI
Sbjct: 493 VQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIF 552
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L + +KAAGY+P L+D+ EE + HHSE++A+A+G+I+ PG +RIT
Sbjct: 553 EELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRIT 612
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C +CHSA K IS +V RE+I+RD RFH F DG CSC D+W
Sbjct: 613 KNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 145/273 (53%), Gaps = 10/273 (3%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA----FINLRRTGGEPDLITFCAFLN 119
A K F E+ E ++ WNA I G KN +DA +++++ + P+ TF L
Sbjct: 38 AHKAFREVSEPDILLWNAIIK----GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 93
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC S+ +G+Q+HG + GF NV V N LV Y K ++ A++VFD + D+ VS
Sbjct: 94 ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVS 153
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ YVQN + +F R+ V+P + SV++A + L G+S+H +
Sbjct: 154 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT 213
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K +E + +L MY K G ++ A FN+M + NL+ WNA+I GYA+ G+ + A+
Sbjct: 214 KLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 273
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
F EM + + +T+ + A ++ G++E
Sbjct: 274 LFREMITKNIRV--DSITMRSAVLASAQVGSLE 304
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 13/303 (4%)
Query: 152 LVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++ F C +V A F + + + + W +++ Y Q + +M++ + V
Sbjct: 22 MIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQV 81
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P F VL AC + +G+ +H K N+FV ++LV MY K G I A I
Sbjct: 82 HPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARI 141
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+K+ +R +V W +II GY G AL+ F+EM +C P+++ LV V++A +
Sbjct: 142 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR--QCNVKPDWIALVSVMTAYTNV 199
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+ +G I + + K G++ + + + + GLV+ A M +P + +W A
Sbjct: 200 EDLGQGKSI-HGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNA 257
Query: 389 LLN--ACRVYGKP--ELGRIAADNLFKLDPNDSGNHVLLSNMFAA--TGRWEEADLVRKE 442
+++ A YG+ +L R ++D + VL S + RW + + + E
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 317
Query: 443 MKD 445
+D
Sbjct: 318 YRD 320
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 339/584 (58%), Gaps = 18/584 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK---DDA 64
P+ +T + A + L G QLH+LAL+ G D V C DMY+K+ ++ D A
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYA 311
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA-FINLRRTGGEPDLITFCAFLNACSD 123
+K+F+ M + ++ +W A IS V G +N + F + +P+ IT+ + L AC++
Sbjct: 312 NKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACAN 371
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S GRQ+H +++S +V N LV Y + + A+ VF+ + +++ +S +
Sbjct: 372 ISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT- 430
Query: 184 LVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
E + R + G+ F +S++SA A + L G+ +HA+ +KA
Sbjct: 431 --------EGRDAPLDHRIGRMDMGISSSTF--ASLISAAASVGMLTKGQQLHAMTLKAG 480
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ FV ++LV MY +CG ++DA +FN++ +RN++ W ++I G A G+A+ ALS F
Sbjct: 481 FGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFH 540
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M + PN VT + VLSACS G V +G + F SM +G+ P EHYAC+VDLL
Sbjct: 541 DMILTGVK--PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R+GLV A E I EMP++ VW LL ACR + E+G IAA N+ +L+P D +VL
Sbjct: 599 RSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVL 658
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A G W+E +R M+D + K G SW+ V+N H F+A DTSH R +I
Sbjct: 659 LSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGK 718
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L L E+K GY+PDT+ L+D+ +E K + HSEKIA+AFGLI PIRI KN
Sbjct: 719 LDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKN 778
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCHSA K++S RE+I+RD+NRFHR DG CSC +YW
Sbjct: 779 LRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 32/368 (8%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ VG + DM ++ G A K+FD + E+ + W IS V G + A++ F++
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN--- 160
G EPD T + ++AC++ ++LG QLH +R GF + V GLVD Y K N
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ-MFLTARREGVEPKDFMISSVL 219
+ A VF+ + + +SW +++ YVQ+ +EN +F E ++P SS+L
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
ACA I+ + GR VHA +K+ VG+ALV MY + G +++A FN++ ER+++
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI 426
Query: 280 CWNAIIGG----YAHQ-GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ I G H+ G DM +SS T ++SA + G + KG
Sbjct: 427 --SCITEGRDAPLDHRIGRMDMGISS---------------STFASLISAAASVGMLTKG 469
Query: 335 MKIFYSMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ ++MTLK G G++ + +V + R G ++ A E+ R IS W ++++
Sbjct: 470 QQL-HAMTLKAGF--GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-WTSMISG 525
Query: 393 CRVYGKPE 400
+G E
Sbjct: 526 LAKHGYAE 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 172/364 (47%), Gaps = 11/364 (3%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNA 86
G+ LH L+ + D V S +YS+ G A +FD M R++ +W A S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL-QLGRQLHGFLVRSGFDG- 144
G + ++ + +G P+ T CA +AC L +G + G + + G G
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+++V + L+D + ++ A+ VFDG+I+K V W ++ YVQ E ++FL
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+G EP + +SS++SAC + + LG +H++A++ + V LVDMY K Q
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 265 DAEIA---FNKMPERNLVCWNAIIGGYAHQG-HADMALSSFEEMTSMRCEAVPNYVTLVC 320
+ A F +M + +++ W A+I GY G + + F EM + + PN++T
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIK--PNHITYSS 364
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+L AC+ + G ++ ++ +K +V + +G ++ A + ++ R
Sbjct: 365 ILKACANISDHDSGRQV-HAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 381 PTIS 384
IS
Sbjct: 424 SMIS 427
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 20/293 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN T+ + KA + + +G+Q+HA +KS Q VG + MY+++G
Sbjct: 350 MLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGC 409
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL----ITFCA 116
++A ++F+++ ER++ + + GR DA ++ R G D+ TF +
Sbjct: 410 MEEARRVFNQLYERSMIS-------CITEGR-----DAPLDHRI--GRMDMGISSSTFAS 455
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
++A + +L G+QLH +++GF + V N LV Y +C + A F+ + D+N
Sbjct: 456 LISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRN 515
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VH 235
+SW SM+ ++ E +F GV+P D +VLSAC+ + + G+
Sbjct: 516 VISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFR 575
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
++ + + + +VD+ + G +++A N+MP + + + W ++G
Sbjct: 576 SMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGA 628
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 22/327 (6%)
Query: 127 LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSML 184
L+LGR LH L+R D + V N L+ Y +C V A+ VFDG+ D VSW +M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR-----IAGLELGRSVHAVAV 239
+N E + G+ P + + +V AC + G + VH + +
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+I VGSAL+DM + G + A F+ + E+ +V W +I Y A+ A+
Sbjct: 184 WGT---DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + E P+ T+ ++SAC+ G+V G+++ +S+ L+ G A +VD
Sbjct: 241 IFLDFLEDGFE--PDRYTMSSMISACTELGSVRLGLQL-HSLALRMGFASDACVSCGLVD 297
Query: 360 LLGRAGL---VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+ ++ + +D A ++ + M IS W AL++ G E + LF N+
Sbjct: 298 MYAKSNIEQAMDYANKVFERMRKNDVIS-WTALISGYVQSGVQENKVMV---LFGEMLNE 353
Query: 417 S--GNHVLLSNMFAATGRWEEADLVRK 441
S NH+ S++ A + D R+
Sbjct: 354 SIKPNHITYSSILKACANISDHDSGRQ 380
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/582 (38%), Positives = 321/582 (55%), Gaps = 5/582 (0%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C + T + A + L G Q+H+LA K+G +V +YSK G
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F E + ++ +NA I G + ++ F L +G T + +
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH- 334
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L L +HG+ ++S F + SV L Y K NE+ A+ +FD +K+ SW +M+
Sbjct: 335 --LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN E+ +F ++ P I+ +LSACA++ L LG+ VH + E
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I+V +AL+ MY KCGSI +A F+ M ++N V WN +I GY G AL+ F EM
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ P VT +CVL ACS AG V++G +IF SM +YG +P +HYAC+VD+LGRA
Sbjct: 513 --LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + RA + I+ M + P SVW LL ACR++ L R ++ LF+LDP++ G HVLLS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N+ +A + +A VR+ K + K G + I + H+F + D SH + EI L
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
KL +M+ AGY P+T AL+DVEEEE+ V HSE++A+AFGLIA PG IRI KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+ K IS I R ++VRD NRFH F DG CSC DYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 10/395 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T+ A+S G+ +H A+ G ++ +G + MY K +DA
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDC 124
K+FD MPE++ WN IS +I F +L + D T L A ++
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L+LG Q+H ++G + V G + Y KC ++ + +F + V++ +M+
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG-LELGRSVHAVAVKACV 243
Y N E E +F G + SS L + ++G L L ++H +K+
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLR----SSTLVSLVPVSGHLMLIYAIHGYCLKSNF 350
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ V +AL +Y K I+ A F++ PE++L WNA+I GY G + A+S F E
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + E PN VT+ C+LSAC++ GA+ G K + + + ++ + +
Sbjct: 411 M--QKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
G + A + M + ++ W +++ ++G+
Sbjct: 468 CGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQ 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 202/479 (42%), Gaps = 54/479 (11%)
Query: 6 ISPNDFTFPCLFKASSAL-HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
IS N T+ FK S+++ H+ Q HA + G +D+ + S G A
Sbjct: 18 ISKN--TYLDFFKRSTSISHLA----QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYA 71
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSD 123
+F + ++ +N + + P +++ F +LR+ T +P+ T+ ++A S
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ GR +HG V G D + + + +V Y K V A+ VFD + +K+ + W +M
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFM-ISSVLSACARIAGLELGRSVHAVAVKAC 242
+ Y +N Q+F E D + +L A A + L LG +H++A K
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ +V + + +Y KCG I+ F + + ++V +NA+I GY G +++LS F+
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 303 EM--------TSMRCEAVP------------------NYVTLVCVLSAC----SRAGAVE 332
E+ +S VP N+++ V +A S+ +E
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGAL 389
K+F K + ++ + GL + A + +EM P +
Sbjct: 372 SARKLFDESPEK-----SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHV--LLSNMFAATGRWEEA----DLVRKE 442
L+AC G LG+ D L + +S +V L M+A G EA DL+ K+
Sbjct: 427 LSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ SPN T C+ A + L GK +H L + ++V + MY+K G
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++FD M ++N TWN IS L G+ + A++ F + +G P +TF L A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G ++ ++ R GF+ +V +VD G+ + A + + I+
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 179 SWCSML 184
W ++L
Sbjct: 591 VWETLL 596
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 344/592 (58%), Gaps = 8/592 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
M E N T+ + +A + L G+++HA L G + +V VG S MY K G
Sbjct: 352 MDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCG 411
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A +F+ MP ++ +WNA I+ +V + ++A++ F + G + T + L
Sbjct: 412 QTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLE 471
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC L+L RQ+H GF GN +V N +V+ Y +C + AK FD + +K V
Sbjct: 472 ACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLV 531
Query: 179 SWCSMLVVYVQNYEE--ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+W +L Y Q+ + + F EG++P + S L ACA +A LE GRS+H
Sbjct: 532 AWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHR 591
Query: 237 -VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A VE ++ +G+ +++MYGKCGS DA++ F++MPE+ L+ WN++I YAH GHA
Sbjct: 592 RAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHAL 651
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
ALSS +EM + P+ T V +L S AG +E+G++ F S +G++P +
Sbjct: 652 EALSSLQEMLLQGFD--PDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLK 709
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VDLL R G +D A E+I P + W LL AC+ YG P+ G A+ +F+L+P
Sbjct: 710 CLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEP 769
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
SG+ V+L+N++A+ GRW +A +RK M+ + +KK GCSWI + +H F + ++ H
Sbjct: 770 QHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHP 829
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ EI L KL M+ AGY+PDT ++DVEE +K + HSE++A+ FGL++ PG
Sbjct: 830 KIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPG 889
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+C DCH+A K IS +VGRE++VRD++RFH F G CSC D+W
Sbjct: 890 ETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 178/344 (51%), Gaps = 4/344 (1%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY K DA +FD + +N+ +W ++ G + A++ F ++ G PD +
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F L+AC+ L GRQ+H +V SG N+ + N LV+ YGKC +V A+ VFDG++
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ VSW +ML VY QN + EGV+P +++ CA++ L+LGR
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H + +E + +G+ALV MYG CGS D + F++M + +++ W +I G + G
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ L F +M +A N VT + ++ C AV++G ++ + L+
Sbjct: 241 YEEGLLVFRKMDLEGVKA--NEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLL 297
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ L G+ G++DRA +++ M R ++ W A++ AC G
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVA-WNAMVTACAQNG 340
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 3/392 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ F A +A G+Q+H+ + SG ++ + S +MY K
Sbjct: 49 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQD 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+K+FD M R++ +W A ++ G A++ + G +P+ +TF ++
Sbjct: 109 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDV 168
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LL LGR++H ++ G + + + N LV YG C K VF + + + W
Sbjct: 169 CAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLW 228
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ QN + E G +F EGV+ + S++ C + ++ G + A ++
Sbjct: 229 TTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILE 288
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + ++L+ +YG+CG + A+ M +R++V WNA++ A G A+
Sbjct: 289 SPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHL 348
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
M A N VT + VL AC+ A+ +G +I + L ++ V+ +
Sbjct: 349 LRRMDMEGFGA--NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITM 406
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G+ G + A + + MP + +S W A++NA
Sbjct: 407 YGKCGQTEAAMSVFEAMPRKDDVS-WNAVINA 437
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
YGKC V A +VFDGI KN SW M+ Y QN ++F + EG P +
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
L ACA L+ GR +H+ V + + NI + ++LV+MYGKC + AE F+ M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEK 333
R++V W A++ YA G AL E ++ M E V PN VT V ++ C++ ++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQAL---ECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL 177
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G KI + + + G++P +V + G G D + M + ++ +W ++ C
Sbjct: 178 GRKIHHRI-INEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGC 235
Query: 394 RVYGKPELG 402
G+ E G
Sbjct: 236 SQNGQYEEG 244
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/585 (39%), Positives = 337/585 (57%), Gaps = 20/585 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL---KDDA 64
P+ +T + A + L G QLH+LAL+ G D V C DMY+K+ + D A
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYA 311
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA-FINLRRTGGEPDLITFCAFLNACSD 123
+K+F+ MP+ ++ +W A IS V G +N + A F + +P+ IT+ + L +C+
Sbjct: 312 NKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCAS 371
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
S GRQ+H +++S +V N LV Y + + A+ VF+ + ++ SM
Sbjct: 372 ISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER------SM 425
Query: 184 LVVYVQNYEEENGCQMFLTAR--REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+ + G L R R V +S++SA A + L G+ +HA+++KA
Sbjct: 426 IPCITE------GRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKA 479
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ FV ++LV MY +CG ++DA +FN++ +RN++ W ++I G A G+A+ ALS F
Sbjct: 480 GFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLF 539
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+M + PN VT + VLSACS G V +G + F SM +G+ P EHYAC+VDLL
Sbjct: 540 HDMILTGVK--PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLL 597
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
R+G+V A E I EMP++ VW LL ACR + E+G I A N+ +L+P D +V
Sbjct: 598 ARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYV 657
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN++A G W+E +R M+D + K G SW+ V+N H F+A DTSH R +I
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYG 717
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L L ++K GY+PDT+ L+D+ +E K + HSEKIA+AFGLI PIRI K
Sbjct: 718 KLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFK 777
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCHSA K++S RE+I+RD+NRFHR DG CSC +YW
Sbjct: 778 NLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 22/363 (6%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV VG + DM ++ G A K+FD + E+ + W IS V G + A++ F++
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN--- 160
G EPD T + ++AC++ ++LG QLH +R G + V GLVD Y K N
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ-MFLTARREGVEPKDFMISSVL 219
+ A VF+ + + +SW +++ YVQ+ +EN +F E ++P SS+L
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
+CA I+ + GR VHA +K+ VG+ALV MY + G +++A FN++ ER+++
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI 426
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
I G D L + +R + + T ++SA + G + KG ++ +
Sbjct: 427 --PCITEGR------DFPL----DHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL-H 473
Query: 340 SMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+M+LK G G++ + +V + R G ++ A E+ R IS W ++++ +G
Sbjct: 474 AMSLKAGF--GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-WTSMISGLAKHG 530
Query: 398 KPE 400
E
Sbjct: 531 YAE 533
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 174/363 (47%), Gaps = 11/363 (3%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNA 86
G+ LH L+ + D V S +YS+ G A +FD M R++ +W A S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL-QLGRQLHGFLVRSGFDG- 144
G + ++ + +G P+ T CA +AC L +G + G + + G G
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+V+V + L+D + ++ A+ VFDG+I+K V W ++ YVQ E ++FL
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+G EP + +SS++SAC + + LG +H++A++ + + V LVDMY K Q
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 265 DAEIA---FNKMPERNLVCWNAIIGGYAHQG-HADMALSSFEEMTSMRCEAVPNYVTLVC 320
+ A F +MP+ +++ W A+I GY G + ++ F EM + + PN++T
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIK--PNHITYSS 364
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+L +C+ + G ++ ++ +K +V + +G ++ A + ++ R
Sbjct: 365 ILKSCASISDHDSGRQV-HAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 381 PTI 383
I
Sbjct: 424 SMI 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 141/289 (48%), Gaps = 12/289 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN T+ + K+ +++ +G+Q+HA +KS Q VG + MY+++G
Sbjct: 350 MLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGC 409
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++F+++ ER++ + GR +D I G TF + ++A
Sbjct: 410 MEEARRVFNQLYERSMIP-------CITEGR-DFPLDHRIVRMDVGISSS--TFASLISA 459
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ +L G+QLH +++GF + V N LV Y +C + A F+ + D+N +SW
Sbjct: 460 AASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISW 519
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
SM+ ++ E +F GV+P D +VLSAC+ + + G+ ++
Sbjct: 520 TSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+ + + +VD+ + G +++A N+MP + + + W ++G
Sbjct: 580 DHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGA 628
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 22/327 (6%)
Query: 127 LQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSML 184
L+LGR LH L+R D + V N L+ Y +C V A+ VFDG+ D VSW +M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR-----IAGLELGRSVHAVAV 239
+N E + G+ P + + + AC + G + VH + +
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
++ VGSAL+DM + G + A F+ + E+ +V W +I Y A+ A+
Sbjct: 184 WGT---DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + E P+ T+ ++SAC+ G+V G+++ +S+ L+ G+ A +VD
Sbjct: 241 LFLDFLEDGFE--PDRYTMSSMISACTELGSVRLGLQL-HSLALRMGLASDACVSCGLVD 297
Query: 360 LLGRAGL---VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+ ++ + +D A ++ + MP IS W AL++ G E +A LF N+
Sbjct: 298 MYAKSNIGQAMDYANKVFERMPKNDVIS-WTALISGYVQSGVQENKVMA---LFGEMLNE 353
Query: 417 S--GNHVLLSNMFAATGRWEEADLVRK 441
S NH+ S++ + + D R+
Sbjct: 354 SIKPNHITYSSILKSCASISDHDSGRQ 380
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 336/588 (57%), Gaps = 7/588 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ T + A AL G+++H +K+G + +V V S M+S G
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A+ +F +M ++L +W A IS G P+ A++ + + G PD IT + L+A
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LL G LH F R+G V V N L+D Y KC + A VF I +KN +SW
Sbjct: 407 CAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S+++ NY F ++P + SVLSACARI L G+ +HA A++
Sbjct: 467 TSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + F+ +AL+DMY +CG ++ A FN E+++ WN ++ GYA QG +A+
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVEL 584
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + + P+ +T +L ACSR+G V G++ F SM K+ I P +HYA VVDL
Sbjct: 585 FHKM--IESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ AYE IK+MP+ P ++WGALLNACR+Y ELG +AA ++F++D G +
Sbjct: 643 LGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYY 702
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LL N++A +G+W+E VRK M++ + GCSW+ V ++H F D H + EI
Sbjct: 703 ILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEIN 762
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L E+M+A G + D++ + G HSE++A+AFGLI PG PI +T
Sbjct: 763 AVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVT 821
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD--YW 586
KNL +C +CH+ KFIS +V R + VRD +FH F DG CSC D YW
Sbjct: 822 KNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 10/428 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFPC+ + L G+++H ++ G DV V + MY K G A
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP R+ +WNA IS + F +R +PDL+T + ++AC
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LGR++HG+++++GF VSV N L+ + A++VF + K+ VSW +M+
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y +N E + + EGV P + I+SVLSACA + L+ G +H A + +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V ++L+DMY KC I A F+++P +N++ W +II G + AL F++M
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI 490
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
PN VTLV VLSAC+R GA+ G +I ++ L+ G+ ++D+ R G
Sbjct: 491 ---LSLKPNSVTLVSVLSACARIGALSCGKEI-HAHALRTGLGFDGFLPNALLDMYVRCG 546
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLS 424
++ A+ ++ W LL GK G +A + K+ +D + + + +
Sbjct: 547 RMEPAWNQFNS--CEKDVASWNILLTGYAQQGK---GGLAVELFHKMIESDVNPDEITFT 601
Query: 425 NMFAATGR 432
++ A R
Sbjct: 602 SLLCACSR 609
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 212/438 (48%), Gaps = 19/438 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +S + T+ L + G ++H+ K+ V +G + M+ + G
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F +M ER+L +WN + G A++ + + G PD+ TF L
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L GR++H ++R GF+ +V V N L+ Y KC ++ A++VFD + ++ +SW
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y +N G ++F R V+P ++SV+SAC + LGR VH +K
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+ M+ G +AE+ F+KM ++LV W A+I GY G + A+ +
Sbjct: 325 TGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVET 384
Query: 301 FEEMTSMRCE-AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV-- 357
+ T M E VP+ +T+ VLSAC+ G ++KG+ M ++ + G Y V
Sbjct: 385 Y---TIMEHEGVVPDEITIASVLSACAGLGLLDKGI-----MLHEFADRTGLTSYVIVAN 436
Query: 358 --VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV-YGKPELGRIAADNLFKLDP 414
+D+ + +D+A E+ +P + IS W +++ R+ Y E + L P
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVIS-WTSIILGLRLNYRSFEALFFFQQMILSLKP 495
Query: 415 NDSGNHVLLSNMFAATGR 432
N V L ++ +A R
Sbjct: 496 NS----VTLVSVLSACAR 509
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/627 (37%), Positives = 340/627 (54%), Gaps = 75/627 (11%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
KQ HAL L++G + D ++ S Y+ + + ++FD + + N+ WN I
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF-- 142
+ P AI + + P+ T+ A L ACSD ++ G Q+H LV+ G
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171
Query: 143 DGNV-----------------------------SVC-NGLVDFYGKCNEVGLAKVVFDGI 172
DG++ +VC N ++D Y + EV A+ +F+G+
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231
Query: 173 ID--------------------------------KNDVSWCSMLVVYVQNYEEENGCQMF 200
D ++++SW +M+ Y+Q ++F
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 291
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
++E + P+ F++ SVLSACA + L+ GR +H A + ++ + +G++LVDMY KC
Sbjct: 292 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 351
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G I A F KM + + WNA+IGG A G A+ A+ F +M + PN +T V
Sbjct: 352 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-----DIYPNEITFVG 406
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL+AC+ G V+KG+ IF SM +YG++P EHY C+VDLLGRAGL+ A +++ +P
Sbjct: 407 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 466
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
PT +VWGALL ACR +G ELG L +L+P +SG + LLSN++A GRWEE VR
Sbjct: 467 PTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVR 526
Query: 441 KEMKDVGIKKGAGCSWISV-KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDT 499
K MK+ GIK G S I + + +H F D SH + +I ML K++E ++ GY PD
Sbjct: 527 KLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDP 586
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
+ L+D++EEEK T V HSEK+A+ FGLI PG IRI KNLR+C DCHSA K IS +
Sbjct: 587 SQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQV 646
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
RE+IVRD R+H F +G CSC D+W
Sbjct: 647 YNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E I P F P + A + L G+ +H A ++ D +G S DMY+K G
Sbjct: 294 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 353
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F++M + +++WNA I + GR ++AID F + P+ ITF LNA
Sbjct: 354 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIY---PNEITFVGVLNA 410
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ L+Q G + + + G + + +VD G+ + A+ V I
Sbjct: 411 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI------- 463
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
EP + ++L AC + +ELG V + +
Sbjct: 464 ---------------------------PTEPTPAVWGALLGACRKHGNVELGERVGKILL 496
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
+ + N + L ++Y K G ++ M ER +
Sbjct: 497 ELEPQ-NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 534
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/577 (40%), Positives = 332/577 (57%), Gaps = 8/577 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ + K + L +QLH+ LK G D V + D YSK G DDA +F M
Sbjct: 304 TYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLM 363
Query: 72 P-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
P +N+ +W A I + A F +R +P+ T+ L A S+ L
Sbjct: 364 PGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA----SIPILL 419
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H ++++ + SV L+ Y K A +F I K+ V+W +ML Y Q
Sbjct: 420 PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQA 479
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACAR-IAGLELGRSVHAVAVKACVEGNIFV 249
+ + +F+ +G++P +F ISS + ACA AG++ GR HA+++K + I V
Sbjct: 480 GDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICV 539
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
GSALV MY + GSI A I F + +R+LV WN++I GYA G++ AL +F +M ++
Sbjct: 540 GSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
E + T + V+ C+ AG V++G + F SM + + I P EHY+C+VDL RAG +D
Sbjct: 600 EM--DGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDE 657
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+I+ MP VW LL ACRV+ ELG++AA L L+P+DS +VLLSN++AA
Sbjct: 658 TMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAA 717
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
GRW+E D VRK M +KK AGCSWI +KN++H F A D SH + +I A L +
Sbjct: 718 AGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTR 777
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+K GY P+T+ L+D+ EE+K T + HSE++ALAFGLIA PP P++I KNLR+CGDC
Sbjct: 778 LKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDC 837
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H K +S I RE+I+RD +RFH F G CSC D+W
Sbjct: 838 HMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 203/399 (50%), Gaps = 10/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + PN FTF + A ++ G+++HA ++K G VFV S +MYSK GL
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGL 251
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F +M R++ +WN ++ +L A+ F + R + + T+ +
Sbjct: 252 VEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKL 311
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVS 179
C++ L L RQLH +++ GF + +V ++D Y KC E+ A +F + +N VS
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +QN + +F R + V+P +F S+VL+A I L +HA +
Sbjct: 372 WTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQII 427
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + VG+AL+ Y K G+ ++A F + +++V W+A++ Y+ G D A +
Sbjct: 428 KTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATN 487
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSAC-SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +M+ + PN T+ + AC S +++G + F+++++KY + + +V
Sbjct: 488 VFIKMSMQGMK--PNEFTISSAIDACASPTAGIDQGRQ-FHAISIKYRYQDAICVGSALV 544
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G +D A + + R +S W ++++ +G
Sbjct: 545 TMYARKGSIDSARIVFERQTDRDLVS-WNSMISGYAQHG 582
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 18/371 (4%)
Query: 27 VTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
V+G+QLH L +K G +V VG + DMY K G +D +F+ MP+RN+ TW + ++
Sbjct: 116 VSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTG 175
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V G + + F +R G P+ TF + L+A + + LGR++H V+ G
Sbjct: 176 YVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST 235
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V VCN L++ Y KC V AK VF + ++ VSW +++ + N + Q+F +R
Sbjct: 236 VFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRA 295
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+ S+V+ CA + L L R +H+ +K + V +A++D Y KCG + D
Sbjct: 296 SMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDD 355
Query: 266 AEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F MP +N+V W A+IGG +A + F M + PN T VL+A
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVK--PNEFTYSTVLTA 413
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL----GRAGLVDRAYEIIKEMPMR 380
+ I IK +H V L + G + A I K + +
Sbjct: 414 ---------SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHK 464
Query: 381 PTISVWGALLN 391
++ W A+L+
Sbjct: 465 DVVA-WSAMLS 474
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 333/586 (56%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN FTF + KA + GKQ+H K G +VFV S MY+K G
Sbjct: 91 MQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQ 150
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD++ +R + +W + IS V G P A++ F +R+ +PD I + + A
Sbjct: 151 ISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTA 210
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ L G+ +HG + + G + + L Y K V +A+ F+ + N + W
Sbjct: 211 YTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILW 270
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y N E ++F + + + S + A A++ LEL R + K
Sbjct: 271 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 330
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + FV + L+DMY KCGSI A F+++ ++++V W+ +I GY GH A+
Sbjct: 331 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 390
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ EM + PN T + +L+AC +G V++G ++F+ M +GI+P +HY+CVVDL
Sbjct: 391 YNEMK--QAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDL 447
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +++AY+ I MP++P +SVWGALL+AC+++ K LG IAA+ LF LDP ++G++
Sbjct: 448 LGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHY 507
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++A+ W VR M G+ K G S I + + FQ D SH ++ EI
Sbjct: 508 VQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIF 567
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L + +KAAGY+P L+D+ EE + HHSE++A+A+G+I+ PG +RIT
Sbjct: 568 EELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRIT 627
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C +CHSA K IS +V RE+I+RD RFH F DG CSC D+W
Sbjct: 628 KNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 145/273 (53%), Gaps = 10/273 (3%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA----FINLRRTGGEPDLITFCAFLN 119
A K F E+ E ++ WNA I G KN +DA +++++ + P+ TF L
Sbjct: 53 AHKAFREVSEPDILLWNAIIK----GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 108
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC S+ +G+Q+HG + GF NV V N LV Y K ++ A++VFD + D+ VS
Sbjct: 109 ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVS 168
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ YVQN + +F R+ V+P + SV++A + L G+S+H +
Sbjct: 169 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT 228
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K +E + +L MY K G ++ A FN+M + NL+ WNA+I GYA+ G+ + A+
Sbjct: 229 KLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 288
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
F EM + + +T+ + A ++ G++E
Sbjct: 289 LFREMITKNIRV--DSITMRSAVLASAQVGSLE 319
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 13/303 (4%)
Query: 152 LVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++ F C +V A F + + + + W +++ Y Q + +M++ + V
Sbjct: 37 MIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQV 96
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P F VL AC + +G+ +H K N+FV ++LV MY K G I A I
Sbjct: 97 HPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARI 156
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+K+ +R +V W +II GY G AL+ F+EM +C P+++ LV V++A +
Sbjct: 157 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR--QCNVKPDWIALVSVMTAYTNV 214
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+ +G I + + K G++ + + + + GLV+ A M +P + +W A
Sbjct: 215 EDLGQGKSI-HGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNA 272
Query: 389 LLN--ACRVYGKP--ELGRIAADNLFKLDPNDSGNHVLLSNMFAA--TGRWEEADLVRKE 442
+++ A YG+ +L R ++D + VL S + RW + + + E
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 332
Query: 443 MKD 445
+D
Sbjct: 333 YRD 335
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 330/559 (59%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H +K+ + V++ +Y+K DA +MFDEMP++N+ +W A IS
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A++ F+ + R+ EP+ TF L +C + GRQ+H ++ ++ ++ V
Sbjct: 169 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 228
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K + A VF + +++ V+ +++ Y Q +E ++F + EG+
Sbjct: 229 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 288
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+SVL+A + +A L G+ VH+ +++ + + ++L+DMY KCG++ A
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER + WNA++ GY+ G A L F+ M + P+ +T + VLS CS
Sbjct: 349 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN-KVKPDSITYLAVLSGCSHG 407
Query: 329 GAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ G++IFY+M K GI+P HY CVVDLLGRAG V+ A++ IK+MP PT ++WG
Sbjct: 408 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 467
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL +CRV+ E+G I L +L+P ++GN+V+LSN++A+ G+WE+ +R M++
Sbjct: 468 SLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKA 527
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SW+ + +H F A D +H R E+ + +L + K GY+PD + LYDV+
Sbjct: 528 VTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVD 587
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + HSEK+ALAFGLIA P G IR+ KNLRIC DCHS KF+S + R VI+R
Sbjct: 588 EEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILR 647
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH G CSC DYW
Sbjct: 648 DKNRFHNIVGGVCSCGDYW 666
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 10/317 (3%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+A + + G E + LN C ++ G+++H ++++ + +V + L+ Y
Sbjct: 76 EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 135
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC+ +G A+ +FD + KN VSW +M+ Y Q +F+ R EP F +
Sbjct: 136 NKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 195
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
++L++C G E GR +H++A+K E ++FVGS+L+DMY K G I DA F+ +PER
Sbjct: 196 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 255
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGM 335
++V AII GYA G + AL F + ++ E + N VT VL+A S A+ G
Sbjct: 256 DVVACTAIISGYAQMGLDEEALKLFRQ---LQIEGMNSNSVTYASVLTALSGLAALNHGK 312
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
++ +S L+ G ++D+ + G V A I MP R IS W A+L
Sbjct: 313 QV-HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCIS-WNAMLVG--- 367
Query: 396 YGKPELGRIAADNLFKL 412
Y K + R + LFKL
Sbjct: 368 YSKHGMAREVLE-LFKL 383
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF + + TG+Q+H++A+K +FVG S DMY+K+G
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 241
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F +PER++ A IS G + A+ F L+ G + +T+ + L A
Sbjct: 242 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H ++RSG V + N L+D Y KC V A+ +FD + ++ +SW
Sbjct: 302 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 361
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSV--HAV 237
+MLV Y ++ ++F R E V+P +VLS C+ ++G + + V
Sbjct: 362 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 421
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
K +E +I +VD+ G+ G +++A KMP W +++G ++
Sbjct: 422 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEI 481
Query: 297 ALSSFEEMTSMRCEAVPNYVTL 318
+ +++ + E NYV L
Sbjct: 482 GIIVGQKLLELEPENAGNYVIL 503
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/654 (35%), Positives = 357/654 (54%), Gaps = 71/654 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIP---VTGKQLHALALKSGQIHDV-FVGCSAFDMYS 56
MRR + P+ FTF LFK SS+ P + LHA L++ FV S MY
Sbjct: 94 MRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYI 153
Query: 57 KTGLKDDADKMFDEM-------------------------------PERNLATWNAYISN 85
+ GL DA + FDE+ P R++ +W + I+
Sbjct: 154 RLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAA 213
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
R + A+ F + G PD +T A L+AC+ L+LGR LH + G +
Sbjct: 214 YSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTS 273
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDG------------IID------------------- 174
++ L+D Y KC + G A+ VFD IID
Sbjct: 274 ENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEME 333
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ +++ SM+ Y+ + + +F++ RR + +F + ++L+ACA + L+ GR+
Sbjct: 334 VRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRA 393
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+HA + VE +I++G+AL+DMY KCG + +A I F +M +R++ W A+I G A G
Sbjct: 394 LHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGM 453
Query: 294 ADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL F +M RC+ PN V+ + VL+ACS + + +G F M + Y I P E
Sbjct: 454 GKAALEHFYQM---RCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIE 510
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C++DLLGR+GL+D A +++K MP++P +W ++L+ACRV+ +L + AA++L KL
Sbjct: 511 HYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKL 570
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P++ G +V L N++ + +WE A +R M++ +KK AG S I+V ++H F D S
Sbjct: 571 EPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKS 630
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R EI AML ++ +K+ GY P T+ DV+EEEK + HSEK+A+AFGLI +
Sbjct: 631 HPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLA 690
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P +P+ I KNLR+C DCHSA K IS + RE+IVRD +RFH F +G CSC+D+W
Sbjct: 691 PNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 169/418 (40%), Gaps = 78/418 (18%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD MP A + + G P F +RR G PD TF FL CS
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTF-HFLFKCSS 114
Query: 124 CSL----LQLGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
S L L LH +R+ V N L+ Y + A+ FD I K+ V
Sbjct: 115 SSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAV 174
Query: 179 -------------------------------SWCSMLVVYVQNYEEENGCQMFLTARREG 207
SW S++ Y + F T G
Sbjct: 175 AWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG 234
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + +VLSACA++ LELGRS+H + + + + + AL+DMY KCG A+
Sbjct: 235 IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQ 294
Query: 268 IAFNKM---PERNLVCWNAIIGGYAHQGHADMALSSFEEM-------------------- 304
F+ + P WNAII GY GH D+A S F+EM
Sbjct: 295 QVFDALGRGPRPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQ 352
Query: 305 --------TSMRCE--AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
SMR V N+ T+V +L+AC+ GA+++G + ++ + ++
Sbjct: 353 LREALLLFMSMRRHDLRVDNF-TVVNLLTACASLGALQQG-RALHACIEQRLVEADIYLG 410
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++D+ + G VD A + + M R + W A++ G +G+ A ++ +++
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMGKR-DVHTWTAMIAGLAFNG---MGKAALEHFYQM 464
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 326/559 (58%), Gaps = 34/559 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + + D+A+ +F+ MP RN +W I+ GR + A+ + L R G P L +
Sbjct: 362 YMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSL 421
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ ACS+ L+ G+Q+H V++G N VCN L+ YGK +G + +FD +
Sbjct: 422 TSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTV 481
Query: 175 KNDVSWCSMLVVYVQN--YEE-----------------------------ENGCQMFLTA 203
K+ VS+ S + VQN ++E ++F +
Sbjct: 482 KDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
E P +++ +L + +LG+ +H +A+K ++ + V +ALV MY KC S
Sbjct: 542 LHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS- 600
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
D+ F+ M ER++ WN II GYA G A+ ++ M S +PN VT V +L
Sbjct: 601 ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVS--AGVLPNEVTFVGLLH 658
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS +G V++G + F SM+ YG+ P EHYAC+VDLLGRAG V A I +MP+ P
Sbjct: 659 ACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDS 718
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W ALL AC+++ E+GR AA+ LF ++P+++GN+V+LSN++++ G W+E VRK M
Sbjct: 719 VIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K+ G+ K GCSW+ +KN++H F D HE+ I A L +L +KA GY+PDT+F L
Sbjct: 779 KERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVL 838
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EE+K + + +HSEK+A+A+GL+ P G+PI+I KNLRICGDCH+ KF+S + RE
Sbjct: 839 HDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKRE 898
Query: 564 VIVRDNNRFHRFWDGYCSC 582
+ VRD NRFH F +G CSC
Sbjct: 899 IDVRDGNRFHHFRNGSCSC 917
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TGLKD 62
E ++P + A L P + +H L K+G DV VG + + Y+K + D
Sbjct: 217 EGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLD 276
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN--LRRTGGEPDLITFCAFLNA 120
A K F+ M RN TW+ I+ GR +A + L+ ++T A
Sbjct: 277 SAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGR 336
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
D +L Q+H + NV N ++ Y + V A+ +F+ + +N +SW
Sbjct: 337 IDDAKIL--FDQIH--------EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISW 386
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N E R+G+ P ++S AC+ I LE G+ VH++AVK
Sbjct: 387 AGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A + N +V +AL+ +YGK SI F++M ++ V +N+ + D A
Sbjct: 447 AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDV 506
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
F M S P+ V+ ++SAC++A + ++IF SM
Sbjct: 507 FNNMPS------PDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 157/359 (43%), Gaps = 42/359 (11%)
Query: 17 FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
F A S + TGKQ+H+LA+K+G + +V + +Y K ++FD M ++
Sbjct: 425 FFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDT 484
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-----------S 125
++N+++S V A D F N+ PD++++ ++AC+ S
Sbjct: 485 VSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRS 540
Query: 126 LL------------------------QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+L QLG+Q+H ++ G D + V N LV Y KC+
Sbjct: 541 MLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS 600
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
K VFD + +++ +W +++ Y Q+ +M+ GV P + +L A
Sbjct: 601 ADSLK-VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHA 659
Query: 222 CARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLV 279
C+ ++ G +++ + + + +VD+ G+ G +Q AE MP E + V
Sbjct: 660 CSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSV 719
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
W+A++G + ++ + E++ S+ NYV L + S+ V K K+
Sbjct: 720 IWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 161/392 (41%), Gaps = 64/392 (16%)
Query: 25 IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+P G+ L A A+ G + G Y++ G DA ++FD M RN WNA ++
Sbjct: 79 MPDAGRSL-ADAISGGNLR---TGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVT 134
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
V G + L R+L FD
Sbjct: 135 CYVQNGD-----------------------------------ITLARKL--------FDA 151
Query: 145 ----NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
+VS N ++ Y + A+ +F+ + ++N VSW M+ YV + MF
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
T EG+ P+ + SVLSA + + S+H + K E ++ VG+A+++ Y K
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKD 271
Query: 261 GSIQDAEIA-FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
++ D+ + F M RN W+ II + G D A + ++ ++VP+ ++
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDP---LKSVPSRTSM- 327
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
L+ +R G ++ +F + +P + ++ + +VD A ++ MP
Sbjct: 328 --LTGLARYGRIDDAKILFDQIH-----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPF 380
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFK 411
R TIS W ++ G+ E ++ L +
Sbjct: 381 RNTIS-WAGMIAGYARNGRSEQALVSLQALHR 411
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN L S L P G+Q+H +A+K G + V + MY K D+ K+
Sbjct: 548 PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCS-SADSLKV 606
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M ER++ TWN I+ G + AI + + G P+ +TF L+ACS L+
Sbjct: 607 FDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLV 666
Query: 128 QLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV-GLAKVVFDGIIDKNDVSWCSML 184
G Q + G + +VD G+ +V G ++D I+ + V W ++L
Sbjct: 667 DEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALL 725
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 22/240 (9%)
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
G+ + A+ VFD + ++ ++W SM+ Y N + G + + + +
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL-----ADAISGGNLRTG 98
Query: 217 SV-LSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ LS AR + R V + V+ V N A+V Y + G I A F+ MP
Sbjct: 99 TILLSGYARAGRVRDARRVFDGMGVRNTVAWN-----AMVTCYVQNGDITLARKLFDAMP 153
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R++ WN ++ GY H + A + FE M N V+ ++S +
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPER------NGVSWTVMISGYVLIEQHGRA 207
Query: 335 MKIFYSMTLKYGIKPGAEHYACV---VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+F +M L G+ P + V V LG+ G+++ + ++ + + V A+LN
Sbjct: 208 WDMFRTM-LCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILN 266
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
SA + G+ G + +A F+ MP R+++ WN++I Y + G D S + ++
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG---- 92
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
N T +LS +RAG V ++F M ++ + + +V + G + A
Sbjct: 93 --GNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVA-----WNAMVTCYVQNGDITLA 145
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
++ MP R +S W +L Y +L A NLF+ P +G
Sbjct: 146 RKLFDAMPSR-DVSSWNTMLTG---YCHSQLME-EARNLFERMPERNG 188
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 341/589 (57%), Gaps = 38/589 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R + N+FT+P + K ++ V G+ +H +++G D+FV + DMY+K G
Sbjct: 123 MQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R++ W A I+ RP A+ F ++ G D IT + +A
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
QLG DG +++ A++VFD + ++N +SW
Sbjct: 243 VG-----QLG------------DGRMAISR--------------ARLVFDRMEERNGISW 271
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML Y QN + +F + +P ++SAC+ + LGR +H +
Sbjct: 272 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 331
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFN--KMPERNLVCWNAIIGGYAHQGHADMAL 298
+ ++ + + +A++DMY KCG + A FN ++ ER++ WN +I GY GH AL
Sbjct: 332 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 391
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F + M+ E V PN +T +LSACS AG +++G K F MT K ++P +HYAC+
Sbjct: 392 ELF---SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACM 447
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VD+LGRAG ++ A+ +IK++P RP+ VWGALL ACR++G ELG IAA+NLF+L+P +
Sbjct: 448 VDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHT 507
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VL+SN++AA+ +W+E ++VR+ MK G+KK A S I +H F D S
Sbjct: 508 GYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYR 567
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ + L EMK GY+PD + L+DVE E+K + +HSEK+A+AFG++ + G+PI
Sbjct: 568 EVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPI 627
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++TKNLR+C DCH AFKFIS I GR++IVRD NRFH F G CSC DYW
Sbjct: 628 QVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 194/439 (44%), Gaps = 56/439 (12%)
Query: 27 VTGKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATW---NAY 82
T K +H+ L+ + +H +YSK G A +FD + N++
Sbjct: 39 TTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSF 98
Query: 83 ISNAVL-----GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+ N +L GR AID +I ++R G + T+ L C+ G +HG +
Sbjct: 99 LCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQV 158
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
VR+GF ++ V LVD Y KC E+G A VFD ++ ++ V W +M+ +Y Q
Sbjct: 159 VRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKAL 218
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F + EG LG + A++V + V G + G
Sbjct: 219 MLFRKMQEEGF---------------------LGDEITAISVASAV-GQLGDGRM----- 251
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+I A + F++M ERN + WN+++ GY G ALS F +M + C+ PN VT
Sbjct: 252 ----AISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD--PNPVT 305
Query: 318 LVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
+ ++SACS G+ G K+ + ++ K I + ++D+ + G +D A E+
Sbjct: 306 ALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNN 363
Query: 377 MPM-RPTISVWGALLNACRV--YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA---- 429
+ +S W L++ V +GK L + + ++PND +LS A
Sbjct: 364 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 423
Query: 430 TGRWEEADL----VRKEMK 444
GR AD+ VR EMK
Sbjct: 424 EGRKCFADMTKLSVRPEMK 442
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 337/582 (57%), Gaps = 27/582 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++HA +K+ + VF+ +Y+K DA +FDEMPERN+ +W A IS
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321
Query: 89 GGRPKNAIDAF---INLRRTG------------------GEPDLITFCAFLNACSDCSLL 127
G A++ F + + TG EP+ TF L +C+
Sbjct: 322 RGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGF 381
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LGRQ+H +++ ++ +V V + L+D Y K ++ A+ VF+ + +++ VS +++ Y
Sbjct: 382 ILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY 441
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q +E ++F + EG++ + VL+A + +A L+LG+ VH +++ + +
Sbjct: 442 AQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFV 501
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ ++L+DMY KCG++ + F+ M ER ++ WNA++ GY+ G L F T M
Sbjct: 502 VLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLF---TLM 558
Query: 308 RCEAV--PNYVTLVCVLSACSRAGAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRA 364
R E P+ VT++ VLS CS G +KG+ IF M+ K ++P EHY CVVDLLGR+
Sbjct: 559 REETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRS 618
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G V+ A+E IK+MP PT ++WG+LL ACRV+ ++G A L +++P ++GN+V+LS
Sbjct: 619 GRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILS 678
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A+ GRWE+ +R M + K G S I + +H F A D SH R EI +
Sbjct: 679 NLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVK 738
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L K GY+PD + L+DV+EE+K + HSEK+AL+FGLIA P VPIR+ KNLR
Sbjct: 739 ELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLR 798
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IC DCH+ K+IS + GREV +RD NRFHR G CSC DYW
Sbjct: 799 ICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 165/328 (50%), Gaps = 6/328 (1%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C PN+FTF + + ++ + G+Q+H+L +K VFVG S DMY+K G +A
Sbjct: 360 CTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEA 419
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F+ +PER++ + A IS G + A++ F L+ G + + +T+ L A S
Sbjct: 420 RTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGL 479
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ L LG+Q+H ++RS V + N L+D Y KC + ++ +FD + ++ +SW +ML
Sbjct: 480 AALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAML 539
Query: 185 VVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLE---LGRSVHAVAVK 240
V Y ++ E ++F R E V+P I +VLS C+ GLE L + K
Sbjct: 540 VGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSH-GGLEDKGLNIFNDMSSGK 598
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
VE + +VD+ G+ G +++A KMP E W +++G + D+
Sbjct: 599 IEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEF 658
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ +++ + NYV L + ++ R
Sbjct: 659 AGQQLLEIEPGNAGNYVILSNLYASAGR 686
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ A LN C + + G+++H ++++ + +V + L+ Y KC+ +G A VFD +
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARR---EGV------------------EPKD 212
++N VSW +M+ Y Q +F + GV EP +
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
F ++VL++C G LGR +H++ +K E ++FVGS+L+DMY K G I +A F
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFEC 425
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+PER++V AII GYA G + AL F + ++ NYVT VL+A S A++
Sbjct: 426 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKS--NYVTYTGVLTALSGLAALD 483
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G ++ ++ L+ I ++D+ + G + + I M R IS W A+L
Sbjct: 484 LGKQV-HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVIS-WNAMLVG 541
Query: 393 CRVYGK 398
+G+
Sbjct: 542 YSKHGE 547
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ E + N T+ + A S L GKQ+H L+S V + S DMYSK G
Sbjct: 457 LQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGN 516
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAFLN 119
+ ++FD M ER + +WNA + G + + F +R T +PD +T A L+
Sbjct: 517 LTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLS 576
Query: 120 ACS 122
CS
Sbjct: 577 GCS 579
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/583 (38%), Positives = 339/583 (58%), Gaps = 5/583 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDA 64
I P++FTF +FKA S L + G++ H ++ G + +VFVG + DMY+K G DA
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ D++ +++ + A I G ++ F N+ + G E + T + L C +
Sbjct: 232 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L GR +HG +V++G + V+ L+ Y +C V + VF I+ N V+W S++
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
V VQN EE F R + P F +SSVL AC+ +A LE G+ +HA+ +K ++
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ +VG+AL+D YGKCGS + A FN + E ++V N++I YA G AL F M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E PN VT + VLSAC+ AG +E+G IF S I+ +HYAC+VDLLGRA
Sbjct: 472 KDTGLE--PNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 529
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A +I ++ + + +W LL+ACR++G E+ + + + L P D G HVLLS
Sbjct: 530 GRLKEAEMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLS 588
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A+TG W + ++ M+++ +KK SW+ V+ IH F A D SH +I+ L
Sbjct: 589 NLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLE 648
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI-AIPPGVPIRITKNL 543
+L E++K GY+PDT F L D++EE+K+ + +HSEK+A+AF L + IRI KNL
Sbjct: 649 ELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNL 708
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+CGDCH+ KF+S IVGR++I RD RFH F +G CSC DYW
Sbjct: 709 RVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 197/388 (50%), Gaps = 7/388 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++ + ALK G H + G D Y K G A K+FDE+P R++ WN+ I++ + G
Sbjct: 98 KIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 155
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVC 149
R K AID + + G PD TF + A SD L+ G++ HG V G NV V
Sbjct: 156 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 215
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y K ++ A++V D ++ K+ V + +++V Y + E+ Q+F ++G+E
Sbjct: 216 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 275
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
++ +SSVL C + L GR +H + VKA +E + ++L+ MY +CG + D+
Sbjct: 276 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKV 335
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F + N V W ++I G G ++AL F +M +R PN TL VL ACS
Sbjct: 336 FKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQM--LRSSITPNSFTLSSVLRACSSLA 393
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E+G +I +++ +K+G+ A ++D G+ G + A + + +SV +
Sbjct: 394 MLEQGKQI-HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 452
Query: 390 LN-ACRVYGKPELGRIAADNLFKLDPND 416
+ A +G L + L+PN+
Sbjct: 453 YSYAQNGFGHEALQLFSGMKDTGLEPNN 480
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 152/301 (50%), Gaps = 7/301 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ I N++T + L +G+ +H L +K+G V S MY + GL
Sbjct: 269 MTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGL 328
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD+ K+F + N TW + I V GR + A+ F + R+ P+ T + L A
Sbjct: 329 VDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRA 388
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS ++L+ G+Q+H +++ G D + V L+DFYGKC +A+ VF+G+++ + VS
Sbjct: 389 CSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSV 448
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y QN Q+F + G+EP + VLSAC LE G + + A
Sbjct: 449 NSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARN 508
Query: 241 ACVEGNIFVG----SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ GNI + + +VD+ G+ G +++AE+ N++ ++V W ++ G +M
Sbjct: 509 S---GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEM 565
Query: 297 A 297
A
Sbjct: 566 A 566
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/612 (36%), Positives = 343/612 (56%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN +TFP L KA++ + G+ LH +A+KS DVFV S Y G D A K+
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + E+++ +WN+ I+ V G P A++ F + + +T L+AC+ L
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ GRQ+ ++ + + N+++ N ++D Y KC + AK +FD + +K++V+W +ML Y
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 188 V--QNYEEEN------------GCQMFLTARREGVEPKDFMIS----------------- 216
++YE ++A + +P + +I
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 217 -SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
S LSACA++ LELGR +H+ K + N V SAL+ MY KCG ++ + FN + +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R++ W+A+IGG A G + A+ F +M + PN VT V ACS G V++
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK--PNGVTFTNVFCACSHTGLVDEAE 486
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+F+ M YGI P +HYAC+VD+LGR+G +++A + I+ MP+ P+ SVWGALL AC++
Sbjct: 487 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 546
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ L +A L +L+P + G HVLLSN++A G+WE +RK M+ G+KK GCS
Sbjct: 547 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-KMTE 514
I + IH F + D +H + ++ L ++ E++K+ GY P+ + L +EEEE K
Sbjct: 607 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQS 666
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+ +GLI+ IR+ KNLR+CGDCHS K IS + RE+IVRD RFH
Sbjct: 667 LNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHH 726
Query: 575 FWDGYCSCSDYW 586
F +G CSC+D+W
Sbjct: 727 FRNGQCSCNDFW 738
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 221/453 (48%), Gaps = 44/453 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK--DDADKMFDEMPERNLATWNAYISNAV 87
KQ H +++G D + F M + + + A K+FDE+P+ N WN I
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 88 LGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G P +I AF+++ + P+ TF + A ++ S L LG+ LHG V+S +V
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N L+ Y C ++ A VF I +K+ VSW SM+ +VQ + ++F E
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
V+ + VLSACA+I LE GR V + + V N+ + +A++DMY KCGSI+DA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 267 EIAF-------------------------------NKMPERNLVCWNAIIGGYAHQGHAD 295
+ F N MP++++V WNA+I Y G +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F E+ + + N +TLV LSAC++ GA+E G + +S K+GI+ +
Sbjct: 347 EALIVFHELQLQKNMKL-NQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTS 404
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-DP 414
++ + + G ++++ E+ + R + VW A++ ++G G A D +K+ +
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEA 460
Query: 415 NDSGNHVLLSNMFAA---TGRWEEADLVRKEMK 444
N N V +N+F A TG +EA+ + +M+
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/583 (37%), Positives = 325/583 (55%), Gaps = 4/583 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN +T L A++ G+ +HA K G DV V + MY K G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D K+++ M +R+L +WNAY+S G + F ++ G P++ TF + L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + GRQ+H ++++ D N VC L+D Y KC + A V F+ + ++ +W
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y Q + E F ++EGV+P +F ++ LS C+ +A LE G+ +H++ K
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++FVGSALVDMY KCG +++AE F + R+ + WN II GYA G + AL++
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E + P+ VT +LSACS G VE+G + F SM +GI P +H AC+VD
Sbjct: 706 FRMMLD---EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVD 762
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGR G D + I++M + +W +L A +++ LG AA+ LF+L P + +
Sbjct: 763 ILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESS 822
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN+FA GRW++ VR M G+KK GCSW+ ++H F + D SH + EI
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L +L E+ + Y+P T + L++V E EK + HSE++AL F LI+ IRI
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
KNLRIC DCH K IS I +E++VRD RFH F +G CSC
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 2/337 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I PN+FT KA S GKQ+HA A K G + D+FVG + D+Y+K G
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A KMF MPE+N TWN ++ G + F ++ + + T L
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L+ G+ +H +++ G++GN + GLVD Y KC A VF I + V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Q + E ++F R P + I S+LSA L+ G+S+HA K
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E ++ V +ALV MY K G + D + M +R+L+ WNA + G G D L+
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
F M + +PN T + +L +CS V G ++
Sbjct: 504 FYHM--LEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 187/374 (50%), Gaps = 7/374 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K +H L +K D + S ++Y+K A + +MP+R++ +W A I V
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G ++I F ++ G P+ T L ACS C L LG+Q+H + G ++ V
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LVD Y KC E+ LA +F G+ ++NDV+W +L Y Q + ++F + V
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +F +++VL CA L+ G+ +H++ +K EGN F+G LVDMY KCG DA
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F + + ++V W+A+I QG ++ ++ F M + +PN T+ +LSA +
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR--LGDTLPNQYTICSLLSAATNT 428
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G ++ G I ++ KYG + +V + + G V ++ + M R IS W A
Sbjct: 429 GNLQYGQSI-HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS-WNA 486
Query: 389 LLNA---CRVYGKP 399
L+ C +Y +P
Sbjct: 487 YLSGLHDCGMYDRP 500
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 7/321 (2%)
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
L + + L C+ L + + +HG +V+ + + + LV+ Y KC A++V
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ D++ VSW +++ V + +F + EG+ P +F +++ L AC+ L+L
Sbjct: 172 KMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDL 231
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+ +HA A K + ++FVGSALVD+Y KCG I+ A F MPE+N V WN ++ GYA
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+G L F M M + N TL VL C+ + +++G ++ +S+ +K G + G
Sbjct: 292 RGDVTGVLKLFCSM--MELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYE-G 347
Query: 351 AEHYAC-VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
E C +VD+ + GL A + K + +P I VW AL+ G+ E I +L
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE-ESIKLFHL 405
Query: 410 FKLDPNDSGNHVLLSNMFAAT 430
+L + + S + AAT
Sbjct: 406 MRLGDTLPNQYTICSLLSAAT 426
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/614 (36%), Positives = 341/614 (55%), Gaps = 36/614 (5%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+PN F + + + + +GK++H L++G DV + + DMY+K G + A +
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 67 MFDEMPERNLATWNAYIS--------------------------NAVLGG--RPKNAIDA 98
+F M ER+ +WN I N ++ G R +A DA
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLL---QLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
+LRR + + A +L LGRQLHG ++ + +G+ V + L+D
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288
Query: 156 YGKCNEVGLAKVVFDG---IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
Y KC + A VFD + + +W +M+ YVQN EE +F REGV
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
F ++SV +ACA + +E GR VH K + + + SA+VDMY KCG+++DA F++
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+N+ W +++ YA G +A+ FE MT+ + PN +TLV VLSACS G V
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK--MTPNEITLVGVLSACSHVGLVS 466
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G F M +YGI P EHY C+VDL GR+GL+D+A I+E + VW LL+A
Sbjct: 467 EGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSA 526
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CR++ E ++A++ L +L+ D+G++V+LSN++A +W + +R M++ ++K
Sbjct: 527 CRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQP 586
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
G SWI +KN +H F A D SH ++ EI A L KL E +K GY T+ ++DVE+E++
Sbjct: 587 GRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRE 646
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
T + HSEK+A+AFG+I+ P G P+RI KNLR+C DCH A K+IS GRE++VRD RF
Sbjct: 647 TALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRF 706
Query: 573 HRFWDGYCSCSDYW 586
H F D CSC D+W
Sbjct: 707 HHFKDASCSCEDFW 720
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 193/422 (45%), Gaps = 46/422 (10%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNAC 121
DA +FDE P R W IS GR + + AF + G P+ A + C
Sbjct: 63 DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ ++ G+++HG+++R+G +V +CN ++D Y KC + A+ VF + +++ VSW
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWN 182
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL---------------------- 219
+ +Q+ + Q+F + + +IS ++
Sbjct: 183 IAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVF 242
Query: 220 -----SACARIAGL----ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
S +AG+ +LGR +H + A +EG+ FV S+L+DMY KCG ++ A F
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVF 302
Query: 271 NKMP--ERNL-VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ R++ W+ ++ GY G + AL F M +R + TL V +AC+
Sbjct: 303 DHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRM--LREGVAADRFTLTSVAAACAN 360
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G VE+G ++ + K K A + +VD+ + G ++ A I + I+VW
Sbjct: 361 VGMVEQGRQV-HGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTK-NIAVWT 418
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA---TGRWEEADLVRKEM 443
++L + +G+ GRIA + ++ + N + L + +A G E +L K+M
Sbjct: 419 SMLCSYASHGQ---GRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQM 475
Query: 444 KD 445
++
Sbjct: 476 QE 477
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE ++ + FT + A + + + G+Q+H K D + + DMY+K G
Sbjct: 339 MLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGN 398
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FD +N+A W + + + G+ + AI+ F + P+ IT L+A
Sbjct: 399 LEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSA 458
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK-VVFDGIIDKNDV 178
CS L+ G + G ++ N +VD YG+ + AK + + I+ +
Sbjct: 459 CSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAI 518
Query: 179 SWCSML 184
W ++L
Sbjct: 519 VWKTLL 524
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 313/526 (59%), Gaps = 3/526 (0%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +MFD++P+ ++ +N P AI + +G PD TF + L AC
Sbjct: 86 DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L+ G+QLH V+ G N+ VC L++ Y CN+V A+ VFD I + V++
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ +N +F + G++P D + LS+CA + L+LGR +H K
Sbjct: 206 AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN 265
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + V +AL+DMY KCGS+ DA F MP R+ W+A+I YA GH A+S
Sbjct: 266 GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISML 325
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + + P+ +T + +L ACS G VE+G + F+SMT +YGI P +HY C++DLL
Sbjct: 326 REMKKAKVQ--PDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLL 383
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GRAG ++ A + I E+P++PT +W LL++C +G E+ ++ +F+LD + G++V
Sbjct: 384 GRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYV 443
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
+LSN+ A GRW++ + +RK M D G K GCS I V N +H F + D H +T +
Sbjct: 444 ILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHH 503
Query: 482 MLTKLREEMKAAGYIPDTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L +E+K AGY+PDT+ Y D+E+EEK + +HSEK+A+ +GL+ PPG IR+
Sbjct: 504 ALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVV 563
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS I GR++I+RD RFH F DG CSC DYW
Sbjct: 564 KNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 5/324 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D+TF L KA + L GKQLH LA+K G +++V + +MY+ D A ++
Sbjct: 133 PDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRV 192
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD++ E + +NA I++ RP A+ F L+ +G +P +T L++C+ L
Sbjct: 193 FDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGAL 252
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LGR +H ++ ++GFD V V L+D Y KC + A VF + ++ +W +M+V Y
Sbjct: 253 DLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAY 312
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGN 246
+ M ++ V+P + +L AC+ +E G H++ + + +
Sbjct: 313 ATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPS 372
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
I ++D+ G+ G +++A +++P + + W ++ + G+ +MA + +
Sbjct: 373 IKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIF 432
Query: 306 SMRCEAVPNYVTLVCVLSACSRAG 329
+ +YV L + C+R G
Sbjct: 433 ELDDSHGGDYVILS---NLCARNG 453
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ + P D T + + L G+ +H K+G V V + DMY+K G
Sbjct: 227 LQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGS 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F +MP R+ W+A I G AI +++ +PD ITF L A
Sbjct: 287 LDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYA 346
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G + H G ++ ++D G+ + A D + I +
Sbjct: 347 CSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPI 406
Query: 179 SWCSML 184
W ++L
Sbjct: 407 LWRTLL 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM---YGKCGSIQDAEIAFNK 272
SS+LS + L + + A +K + N V + L++ S+ A F+K
Sbjct: 36 SSILSLIPKCTSLRELKQIQAYTIKT-HQNNPTVLTKLINFCTSNPTIASMDHAHRMFDK 94
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAV 331
+P+ ++V +N + GYA D L + + + C +P+ T +L AC+R A+
Sbjct: 95 IPQPDIVLFNTMARGYA---RFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKAL 151
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
E+G K + + +K G+ G Y C ++++ VD A + ++ P + + A+
Sbjct: 152 EEG-KQLHCLAVKLGV--GDNMYVCPTLINMYTACNDVDAARRVFDKIG-EPCVVAYNAI 207
Query: 390 LNACRVYGKPELGRIAADNLFK------LDPNDSGNHVLLSN--MFAA--TGRW 433
+ +C +P A LF+ L P D V LS+ + A GRW
Sbjct: 208 ITSCARNSRPN----EALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRW 257
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 329/559 (58%), Gaps = 2/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H +K+ + V++ +Y+K DA MFDEMP+RN+ +W A IS
Sbjct: 81 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G A++ F+ + R+ EP+ TF L +C + GRQ+H ++ ++ ++ V
Sbjct: 141 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 200
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K + A VF + +++ V+ +++ Y Q +E ++F + EG+
Sbjct: 201 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 260
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+SVL+A + +A L G+ VH+ +++ + + ++L+DMY KCG++ A
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPER + WNA++ GY+ G A L F+ M + P+ +T + VLS CS
Sbjct: 321 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN-KVKPDSITYLAVLSGCSHG 379
Query: 329 GAVEKGMKIFYSMTL-KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ G++IFY+M K GI+P HY CVVDLLGRAG V+ A++ IK+MP PT ++WG
Sbjct: 380 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 439
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL +CRV+ E+G I L +L+P ++GN+V+LSN++A+ G+WE+ +R M++
Sbjct: 440 SLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKA 499
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K G SW+ + +H F A D +H R E+ + +L + K GY+PD + LYDV+
Sbjct: 500 VTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVD 559
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + HSEK+ALAFGLIA P G IR+ KNLRIC DCHS KF+S + R VI+R
Sbjct: 560 EEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILR 619
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH G CSC DYW
Sbjct: 620 DKNRFHNIVGGVCSCGDYW 638
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 163/317 (51%), Gaps = 10/317 (3%)
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+A + + G E + + LN C ++ G+++H ++++ + +V + L+ Y
Sbjct: 48 EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 107
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC+ +G A+ +FD + +N VSW +M+ Y Q +F+ R EP F +
Sbjct: 108 NKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 167
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
++L++C G E GR +H++A+K E ++FVGS+L+DMY K G I DA F+ +PER
Sbjct: 168 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 227
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGM 335
++V AII GYA G + AL F + ++ E + N VT VL+A S A+ G
Sbjct: 228 DVVACTAIISGYAQMGLDEEALKLFRQ---LQIEGMNSNSVTYASVLTALSGLAALNHGK 284
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
++ +S L+ G ++D+ + G V A I MP R IS W A+L
Sbjct: 285 QV-HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCIS-WNAMLVG--- 339
Query: 396 YGKPELGRIAADNLFKL 412
Y K + R + LFKL
Sbjct: 340 YSKHGMAREVLE-LFKL 355
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTF + + TG+Q+H++A+K +FVG S DMY+K+G
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 213
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F +PER++ A IS G + A+ F L+ G + +T+ + L A
Sbjct: 214 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H ++RSG V + N L+D Y KC V A+ +FD + ++ +SW
Sbjct: 274 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 333
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSV--HAV 237
+MLV Y ++ ++F R E V+P +VLS C+ ++G + + V
Sbjct: 334 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 393
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
K +E +I +VD+ G+ G +++A KMP W +++G ++
Sbjct: 394 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEI 453
Query: 297 ALSSFEEMTSMRCEAVPNYVTL 318
+ +++ + E NYV L
Sbjct: 454 GIIVGQKLLELEPENAGNYVIL 475
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 326/566 (57%), Gaps = 12/566 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ HA ++ G D+ +MYSK L K DEM ++L N I
Sbjct: 69 GRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQ 128
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ I ++R + T + L C+ C++L+ QLH F +++ D N
Sbjct: 129 NAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILEC-MQLHAFSIKAAIDSNCF 187
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+ Y KC+ + A +F+ + +KN V+W SM+ YVQN + +F A+ G
Sbjct: 188 VXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMG 247
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ F ISS +SACA +A L G+ VHA++ K+ NI+V S+L+DMY KCG I++A
Sbjct: 248 FDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAY 307
Query: 268 IAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F E R++V WNA+I G+A A A+ FE+M P+ VT V VL+ACS
Sbjct: 308 LVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQR--GFFPDDVTYVSVLNACS 365
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G E+G K F M ++ + P HY+C++D+LGRAGLV +AY++I M T S+W
Sbjct: 366 HMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMW 425
Query: 387 GALLN-------ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLV 439
G++ +CR+YG E IAA +LF+++PN++GNH+LL+N++AA + +E
Sbjct: 426 GSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARA 485
Query: 440 RKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDT 499
RK +++ ++K G SWI +KN+IH F + +H + + A L L E+K Y DT
Sbjct: 486 RKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDT 545
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
N L+DVEE K +GHHSEK+A+ FGL+ +P +PIRI KNLRICGDCH+ K +S
Sbjct: 546 NNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKF 605
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDY 585
RE+IVRD NRFH F DG CSC ++
Sbjct: 606 ASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 135/275 (49%), Gaps = 3/275 (1%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L C+ GR H ++R G + ++ L++ Y KC+ V + D ++ K+
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ + + QN E+ ++ + +RE +F ISSVL CA + +HA
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHA 175
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
++KA ++ N FV +AL+ +Y KC SI+DA F MPE+N V W++++ GY G D
Sbjct: 176 FSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDE 235
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F M + P ++ +SAC+ + +G ++ ++M+ K G +
Sbjct: 236 ALLLFHNAQLMGFDQDPFNIS--SAVSACAGLATLVEGKQV-HAMSHKSGFGSNIYVASS 292
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
++D+ + G + AY + + +I +W A+++
Sbjct: 293 LIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMIS 327
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
F A + L V GKQ+HA++ KSG +++V S DMY+K G +A +F+
Sbjct: 253 FNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEG 312
Query: 71 MPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
E R++ WNA IS + A+ F +++ G PD +T+ + LNACS L +
Sbjct: 313 FVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEE 372
Query: 130 GRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
G++ +VR +V + ++D G+ GL + +D I
Sbjct: 373 GQKYFDLMVRQHNLSPSVLHYSCMIDILGR---AGLVQKAYDLI 413
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/679 (34%), Positives = 353/679 (51%), Gaps = 95/679 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDM------ 54
M + + P+++T+P + +A + + GK++H LK G DV+V + +M
Sbjct: 132 MVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 191
Query: 55 -------------------------YSKTGLKDDADKMFDEMPERN-------------- 75
Y K G ++A +FD+MP+RN
Sbjct: 192 MRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKM 251
Query: 76 -----------------LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+ +W+A IS G + A+ FI + G D + + L
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 311
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG--------------------- 157
+AC+ S+++ G+ +HG ++R G + V++ N L+ Y
Sbjct: 312 SACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQI 371
Query: 158 ----------KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
KC V A+ +FD + +K+ VSW +++ Y Q+ +F +
Sbjct: 372 SWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ 431
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + ++ SV+SAC +A L+ G+ VHA K ++ N+ +G+ L+DMY KCG +++A
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
FN M E+ + WNA+I G A G + +L F EM + +PN +T + VL AC
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN--NGVIPNEITFMGVLGACRH 549
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++G F SM K+GI+P +HY C+VDLLGRAGL++ A ++I+ MPM P ++ WG
Sbjct: 550 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 609
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL AC+ +G E+G L +L P+ G HVLLSN+FA+ G WE+ VR MK G
Sbjct: 610 ALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 669
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K GCS I +H F A D +H +++ ML ++ + +K GY PDTN D++
Sbjct: 670 VVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDID 729
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EEEK T + HSEK+A+AFGL+ I P PIRI KNLRIC DCH+A K IS RE++VR
Sbjct: 730 EEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVR 789
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D +RFH F +G CSC DYW
Sbjct: 790 DRHRFHYFKEGACSCMDYW 808
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 161/375 (42%), Gaps = 53/375 (14%)
Query: 39 SGQIHDVFVGCSAFDMYSKT---GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNA 95
+G I D F + + GL D + ++FD + N WN + + + A
Sbjct: 67 TGFISDTFAASRLLKFSTDSPFIGL-DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKA 125
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVD 154
+ + + + PD T+ + AC+ LL+ G +++H +++ GFD +V V N L++
Sbjct: 126 LLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLIN 184
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y C + A+ +FD + VSW S+L YV+ + E +F
Sbjct: 185 MYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIF-------------- 230
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ NI ++++ + GK G + +A FN+M
Sbjct: 231 -------------------------DQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMD 265
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVE 332
E+++V W+A+I GY G + AL F EM + MR + V +V VLSAC+ V+
Sbjct: 266 EKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE----VVVVSVLSACAHLSIVK 321
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G K+ + + ++ GI+ ++ + +G + A ++ IS W ++++
Sbjct: 322 TG-KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS-WNSMISG 379
Query: 393 CRVYGKPELGRIAAD 407
C G E R D
Sbjct: 380 CMKCGSVEKARALFD 394
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 18/288 (6%)
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL--AKVVF 169
IT +C L+ ++ ++ +GF + + L+ F +GL + +F
Sbjct: 39 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 98
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D I + N W +M+ Y+Q+ E ++ + V P ++ V+ ACA + LE
Sbjct: 99 DRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLE 157
Query: 230 LG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
G + +H +K + +++V + L++MY CG+++DA F++ P + V WN+I+ GY
Sbjct: 158 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 217
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+G + A F++M A + + L+ + G V + K+F M K +
Sbjct: 218 VKKGDVEEAKLIFDQMPQRNIVASNSMIVLL------GKMGQVMEAWKLFNEMDEKDMVS 271
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNAC 393
++ ++ + G+ + A + EM MR V ++L+AC
Sbjct: 272 -----WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 314
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 340/579 (58%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + +A L GK +H + SG D +MY+K G + ++
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F M ++ +WN+ I+ + G A+ F + +T +PD +T+ L+ + L
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDL 491
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG++LH L + GF+ N+ V N LVD Y KC E+G + VF+ + ++ ++W +++
Sbjct: 492 XLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 551
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V + + G +M R EGV P + S+L C+ +A G+ +H K +E ++
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 611
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
VG+ L++MY KCGS++++ F M +++V W A+I G A+ +F EM +
Sbjct: 612 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA- 670
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
VP++V V ++ ACS +G VE+G+ F+ M Y I+P EHYACVVDLL R+ L+
Sbjct: 671 -AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 729
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D+A + I MP++P S+WGALL+ACR+ G E+ + ++ + +L+P+D+G +VL+SN++
Sbjct: 730 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVY 789
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA G+W++ +RK +K G+KK GCSW+ ++N++++F E+ E+ +L L
Sbjct: 790 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLA 849
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
M GYI + F L+D++E+EK + HSE++A+AFGL+ PG P+++ KNLR+C
Sbjct: 850 GLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCE 909
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+ K+IS I RE++VRD NRFH F DG CSC DYW
Sbjct: 910 DCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 194/392 (49%), Gaps = 6/392 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+R + P+ +TFP + A + L K +H L G D+++G + DMY +
Sbjct: 166 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDL 225
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A K+F+EMP R++ +WN+ IS G A++ + R G PD T + L AC
Sbjct: 226 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRAC 285
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ G +HG + + G +V V NGL+ Y K N + + +FD ++ ++ VSW
Sbjct: 286 GGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWN 345
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ Y Q E ++F+ + +P I+S+L AC + LE G+ VH + +
Sbjct: 346 TMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITS 404
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
E + + L++MY KCG++ ++ F+ M ++ V WN++I Y G D A+ F
Sbjct: 405 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 464
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+ M+ + P+ VT V +LS ++ G + G ++ + K G +VD+
Sbjct: 465 K---MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA-KMGFNSNIVVSNTLVDMY 520
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ G + + ++ + M R I+ W ++ +C
Sbjct: 521 AKCGEMGDSLKVFENMKARDIIT-WNTIIASC 551
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 196/425 (46%), Gaps = 16/425 (3%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD-EM 71
F + +A ++ +LH+L + G H V Y+ + +F
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P N+ WN+ I G A+ + +R +PD TF + +NAC+ ++ +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
+H ++ GF ++ + N L+D Y + N++ A+ VF+ + ++ VSW S++ Y N
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+++ R GV P + +SSVL AC + +E G +H + K ++ ++ V +
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
L+ MY K + D F+KM R+ V WN +I GY+ G + ++ F EM + +
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN---QF 371
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ +T+ +L AC G +E G + Y +T Y A + ++++ + G + +
Sbjct: 372 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLAS 429
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN----DSGNHVLLSNM 426
E+ M + ++S W +++N G + A LFK+ DS +V+L +M
Sbjct: 430 QEVFSGMKCKDSVS-WNSMINVYIQNGSFD----EAMKLFKMMKTDVKPDSVTYVMLLSM 484
Query: 427 FAATG 431
G
Sbjct: 485 STQLG 489
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 2/346 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ T+ L S+ L GK+LH K G ++ V + DMY+K G
Sbjct: 466 MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGE 525
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K+F+ M R++ TWN I++ V + +R G PD+ T + L
Sbjct: 526 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 585
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + + G+++HG + + G + +V V N L++ Y KC + + VF + K+ V+W
Sbjct: 586 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 645
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ E + + F G+ P +++ AC+ +E G + H +
Sbjct: 646 TALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKK 705
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
+E I + +VD+ + + AE MP + + W A++ G ++A
Sbjct: 706 DYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQ 765
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
E + + + YV + V +A + V K + LK
Sbjct: 766 RVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLK 811
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ + SS+ A A A +H++ + + ++ + L+ Y +D +F
Sbjct: 71 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDPTSSF 127
Query: 271 NKM----PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ P N+ WN+II H G ALS + E +R + P+ T V++AC
Sbjct: 128 SVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQ--PDTYTFPSVINAC- 184
Query: 327 RAGAVEKGM-KIFYSMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AG ++ M K + L G G++ Y ++D+ R +D+A ++ +EMP+R +
Sbjct: 185 -AGLLDFEMAKSIHDRVLXMGF--GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV 241
Query: 384 SVWGALL---NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
S W +L+ NA + + NL + + + + VL + G EE D++
Sbjct: 242 S-WNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA--CGGLGSVEEGDIIH 298
Query: 441 KEMKDVGIKK 450
++ +GIKK
Sbjct: 299 GLIEKIGIKK 308
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 331/582 (56%), Gaps = 3/582 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T L KA + G H+ L G +DVFV S DMYS G A
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA 301
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD M R+L +WNA IS V G + F L ++G D T + + CS S
Sbjct: 302 LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTS 361
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ GR LH ++R + ++ + +VD Y KC + A +VF + KN ++W +MLV
Sbjct: 362 DLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLV 421
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
QN E+ ++F + E V + S++ CA + L GR+VHA ++
Sbjct: 422 GLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFN-KMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ + SAL+DMY KCG I AE FN + ++++ N++I GY GH AL + M
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRM 541
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
R + PN T V +L+ACS +G VE+G +F+SM + ++P +HYAC+VDL RA
Sbjct: 542 IEERLK--PNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRA 599
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G ++ A E++K+MP +P+ V ALL+ CR + +G AD L LD +SG +V+LS
Sbjct: 600 GRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLS 659
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A +WE + +R M+ G+KK G S I V N+++ F A D SH +I +L
Sbjct: 660 NIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLE 719
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
LR E++A GYIPDT+ L DV E K+ + HSE++A+AFGL++ P G I+ITKNLR
Sbjct: 720 NLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLR 779
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+C DCH+ K+IS IV RE+IVRD NRFH F +G CSC+D+W
Sbjct: 780 VCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 225/472 (47%), Gaps = 44/472 (9%)
Query: 12 TFPCLF--KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
++ C+F KA + L G ++ A++ G ++VG S + K G DA K+FD
Sbjct: 145 SYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFD 204
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
MPE+++ WN+ I V G +I F+ + G P +T L AC L ++
Sbjct: 205 GMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKV 264
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G H +++ G +V V LVD Y + G A +VFD + ++ +SW +M+ YVQ
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N +F + G + S++ C++ + LE GR +H+ ++ +E ++ +
Sbjct: 325 NGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVL 384
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+A+VDMY KCG+I+ A I F +M ++N++ W A++ G + G+A+ AL F +M +
Sbjct: 385 STAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKV 444
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
A N VTLV ++ C+ G++ KG + ++ +++G A + ++D+ + G +
Sbjct: 445 AA--NSVTLVSLVHCCAHLGSLTKG-RTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHS 501
Query: 370 A-----------------------------------YEIIKEMPMRPTISVWGALLNACR 394
A Y + E ++P + + +LL AC
Sbjct: 502 AEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACS 561
Query: 395 VYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
G E G+ ++ + + P ++ L ++ + GR EEAD + K+M
Sbjct: 562 HSGLVEEGKALFHSMERDHDVRPQHK-HYACLVDLHSRAGRLEEADELVKQM 612
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 184/388 (47%), Gaps = 24/388 (6%)
Query: 14 PCLFKASSALH----IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
P +F SS LH + K +HA +K+ + F+ +YS G A +FD
Sbjct: 46 PSVF--SSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFD 103
Query: 70 E--MPERNLATWNAYISNAVLGGRPKNAIDAFI-NLRRTGGEPDL---ITFCAF-LNACS 122
+ +PE + NA++ G +N + L R G D+ C F L AC+
Sbjct: 104 QCSLPE-------TAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACT 156
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
D ++G ++ VR GF ++ V + +V+F K + A+ VFDG+ +K+ V W S
Sbjct: 157 DLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNS 216
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ YVQ QMFL G+ P ++++L AC + ++G H+ +
Sbjct: 217 IIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALG 276
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++FV ++LVDMY G A + F+ M R+L+ WNA+I GY G + + F
Sbjct: 277 MGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFR 336
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+ ++ + + TLV ++ CS+ +E G +I +S ++ ++ +VD+
Sbjct: 337 RL--VQSGSGFDSGTLVSLIRGCSQTSDLENG-RILHSCIIRKELESHLVLSTAIVDMYS 393
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G + +A + M + I+ W A+L
Sbjct: 394 KCGAIKQATIVFGRMGKKNVIT-WTAML 420
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
+ +H ++++ + L+ Y +G A+ VFD +M+ +++N
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ ++F +E + L AC + E+G + AV+ +++VG
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
S++V+ K G + DA+ F+ MPE+++VCWN+IIGGY +G ++ F EM
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ VT+ +L AC ++G + GM +S L G+ +VD+ G A
Sbjct: 244 --PSPVTMANLLKACGQSGLKKVGM-CAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300
Query: 371 YEIIKEMPMRPTISVWGALLN 391
+ M R IS W A+++
Sbjct: 301 ALVFDSMCSRSLIS-WNAMIS 320
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E ++ N T L + L G+ +HA ++ G D + + DMY+K G
Sbjct: 439 MQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGK 498
Query: 61 KDDADKMF-DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A+K+F +E +++ N+ I + G + A+ + + +P+ TF + L
Sbjct: 499 IHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLT 558
Query: 120 ACSDCSLLQLGRQL 133
ACS L++ G+ L
Sbjct: 559 ACSHSGLVEEGKAL 572
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/481 (43%), Positives = 294/481 (61%), Gaps = 6/481 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P + + L +C ++ G+QLH + +GF + + LV+ Y C+ + A+++
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
FD I N W ++ Y N E Q++ G+ P +F VL ACA ++ +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN---LVCWNAII 285
E GR +H V+ E ++FVG+AL+DMY KCG + A F+K+ R+ +V WNA+I
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMI 252
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GYA GHA AL FEEM + A P+++T V VLSACS G +E+G F +M Y
Sbjct: 253 TGYAMHGHATEALDLFEEMNRV---AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
I P +HY C+VDLLG +G +D AY +I +M + P VWGALLN+C+++ ELG IA
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIA 369
Query: 406 ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHI 465
+ L +L+P+D+GN+V+LSN++A G+WE +RK M D +KK CSWI VKN++H
Sbjct: 370 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHA 429
Query: 466 FQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALA 525
F + DTSH + EI + L ++ MK AGY P T +DVE++EK V HSE++A+A
Sbjct: 430 FLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIA 489
Query: 526 FGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
FGLI+ PPG + ITKNLRIC DCH A KFIS I RE+ VRD NR+H F DG CSC DY
Sbjct: 490 FGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDY 549
Query: 586 W 586
W
Sbjct: 550 W 550
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 10/350 (2%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C++P + L ++ A GKQLHA +G D + ++Y A
Sbjct: 70 CLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSA 129
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+FD +P+ N+ WN I G + A+ + + G PD TF L AC+
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND---VSWC 181
S ++ GR++H +V++G++ +V V L+D Y KC VG A+ VFD I+ ++ VSW
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ Y + +F R +P VLSAC+ LE G ++
Sbjct: 250 AMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 308
Query: 242 C-VEGNIFVGSALVDMYGKCGSIQDAE---IAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ + + +VD+ G G + +A + +P+ + W A++ + ++
Sbjct: 309 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGV--WGALLNSCKIHANVELG 366
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+ E + + + NYV L + + + V K K+ LK I
Sbjct: 367 EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSI 416
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/593 (39%), Positives = 344/593 (58%), Gaps = 12/593 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ I P++F + + L + G+QLH A+K G D V + MY + G
Sbjct: 475 MRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGR 534
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
+ ++F+ M ++ +WN+ + P ++ F N+ ++G P+ +TF FL
Sbjct: 535 MSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLA 594
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
A + S+L+LG+Q+H +++ G + +V N L+ Y K +V + +F + + D +
Sbjct: 595 ALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAI 654
Query: 179 SWCSMLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW SM+ Y+ N +E C + + ++ F I VL+ACA +A LE G +HA
Sbjct: 655 SWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSI--VLNACASVAALERGMEMHA 712
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+++ +E ++ V SALVDMY KCG I A F+ M ++N WN++I GYA G
Sbjct: 713 FGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRK 772
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL FEEM P++VT V VLSACS AG VE+G+ F M YGI P EHY+C
Sbjct: 773 ALEIFEEM--QESGESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSC 829
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV---YGKPELGRIAADNLFKLD 413
V+DLLGRAG +D+ E +K MPM+P +W +L AC+ K +LG A+ L +L+
Sbjct: 830 VIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELE 889
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + N+VL S AA GRWE+ R MK +KK AG SW+++ + +H F A D SH
Sbjct: 890 PQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSH 949
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
EI L L ++++ AGY+P T + L+D+EEE K + +HSEK+A+AF L
Sbjct: 950 PNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSS 1009
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PIRI KNLR+CGDCH+AF++IS IVGR++I+RD+ RFH F DG CSC DYW
Sbjct: 1010 GGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 194/394 (49%), Gaps = 13/394 (3%)
Query: 6 ISPNDFTFPCLFKAS--SALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+ P + TF L A+ S+ + + QL LKSG D++VG + +++ G+ D+
Sbjct: 273 LRPTEHTFGSLITATYLSSCSLGLL-DQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDE 331
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++ + ERN T N I+ V + A + F+ R + ++ T+ L+A ++
Sbjct: 332 AKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA-VNVDTYVVLLSAIAE 390
Query: 124 CSL----LQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
S L+ GR++H ++R+G ++V NGLV+ Y KC + A VF + ++ +
Sbjct: 391 FSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRI 450
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +++ QN E + R+ + P +F S LS+CA + L G+ +H A
Sbjct: 451 SWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDA 510
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA-HQGHADMA 297
VK + + V +ALV MYG+CG + + FN M ++V WN+I+G A Q +
Sbjct: 511 VKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITES 570
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F M M+ VPN VT V L+A + +E G +I +S+ LK+G+ +
Sbjct: 571 VQVFSNM--MKSGLVPNKVTFVNFLAALTPLSVLELGKQI-HSVMLKHGVTEDNAVDNAL 627
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ ++G VD + M R W ++++
Sbjct: 628 MSCYAKSGDVDSCERLFSRMSGRRDAISWNSMIS 661
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 29/383 (7%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+ LH +K G HD+F+ + Y+K D A ++FD MP RN +W IS VL
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 90 GRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQLG--RQLHGFLVRSGFDGN 145
G P++A F + R G P TF + L AC D +LG Q+HG + ++ F N
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 146 VSVCNGLVDFYGKCNEVG---LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
+VCN L+ YG C+ VG LA+ VFD ++ ++W +++ VY + + +F
Sbjct: 205 TTVCNALISMYGSCS-VGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRA 263
Query: 203 ARRE--GVEPK-------DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+ + G+E + + ++ LS+C+ L L + +K+ +++VGSAL
Sbjct: 264 MQYDDSGIELRPTEHTFGSLITATYLSSCS----LGLLDQLFVRVLKSGCSSDLYVGSAL 319
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
V + + G + +A+ + + ERN V N +I G Q H + A F R A
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF---MGARDSAAV 376
Query: 314 NYVTLVCVLSACSRAGAVEKGMKI---FYSMTLKYG-IKPGAEHYACVVDLLGRAGLVDR 369
N T V +LSA + E+G++ ++ L+ G I +V++ + G +D+
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436
Query: 370 AYEIIKEMPMRPTISVWGALLNA 392
A + + M R IS W ++ A
Sbjct: 437 ACRVFQLMEARDRIS-WNTIITA 458
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/627 (37%), Positives = 340/627 (54%), Gaps = 75/627 (11%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
KQ HAL L++G + D ++ S Y+ + + ++FD + + N+ WN I
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF-- 142
+ P AI + + P+ T+ A L ACSD ++ G Q+H LV+ G
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170
Query: 143 DGNV-----------------------------SVC-NGLVDFYGKCNEVGLAKVVFDGI 172
DG++ +VC N ++D Y + EV A+ +F+G+
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230
Query: 173 ID--------------------------------KNDVSWCSMLVVYVQNYEEENGCQMF 200
D ++++SW +M+ Y+Q ++F
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
++E + P+ F++ SVLSACA + L+ GR +H A + ++ + +G++LVDMY KC
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 350
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G I A F KM + + WNA+IGG A G A+ A+ F +M + PN +T V
Sbjct: 351 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-----DINPNEITFVG 405
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL+AC+ G V+KG+ IF SM +YG++P EHY C+VDLLGRAGL+ A +++ +P
Sbjct: 406 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 465
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
PT +VWGALL ACR +G ELG L +L+P +SG + LLSN++A GRWEE VR
Sbjct: 466 PTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVR 525
Query: 441 KEMKDVGIKKGAGCSWISV-KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDT 499
K MK+ GIK G S I + + +H F D SH + +I ML K++E ++ GY PD
Sbjct: 526 KLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDP 585
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
+ L+D++EEEK T V HSEK+A+ FGLI PG IRI KNLR+C DCHSA K IS +
Sbjct: 586 SQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQV 645
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
RE+IVRD R+H F +G CSC D+W
Sbjct: 646 YNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 164/398 (41%), Gaps = 72/398 (18%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG-------L 60
PN +T+P + KA S + G Q+HA +K G D + SA MY+ G +
Sbjct: 135 PNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 194
Query: 61 KDD-------------------------ADKMFDEMPERNL-ATWNAYIS---------- 84
DD A ++F+ MP+R++ +TWNA IS
Sbjct: 195 LDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEV 254
Query: 85 ----------------NAVLGGRPK-----NAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+A++ G + A++ F +++ P + L+AC++
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L GR +H + R+ + + LVD Y KC + LA VF+ + +K SW +M
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKAC 242
+ + E+ +F + + P + VL+ACA ++ G ++ +++ +
Sbjct: 375 IGGLAMHGRAEDAIDLF---SKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF 301
VE I +VD+ G+ G + +AE + +P E W A++G G+ ++
Sbjct: 432 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 491
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + + + Y L + + R G V K MK
Sbjct: 492 KILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMK 529
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E I P F P + A + L G+ +H A ++ D +G S DMY+K G
Sbjct: 293 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 352
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F++M + +++WNA I + GR ++AID F + P+ ITF LNA
Sbjct: 353 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF---SKMDINPNEITFVGVLNA 409
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ L+Q G + + + G + + +VD G+ + A+ V I
Sbjct: 410 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI------- 462
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
EP + ++L AC + +ELG V + +
Sbjct: 463 ---------------------------PTEPTPAVWGALLGACRKHGNVELGERVGKILL 495
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
+ + N + L ++Y K G ++ M ER +
Sbjct: 496 ELEPQ-NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 533
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/543 (40%), Positives = 321/543 (59%), Gaps = 8/543 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLR 103
+FV S MY+K GL DDA +MFD MP RN+ TW ++ A GR + A+ + +R
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMR 163
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R G P+ TF + L AC+ +L +H V++G D +V V + L+D Y K ++
Sbjct: 164 RDGVAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLD 220
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
+ VFD ++ ++ V W S++ + Q+ + ++F+ + G ++SVL AC
Sbjct: 221 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACT 280
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ LE GR VHA +K + ++ + +AL+DMY KCGS++DA+ F++MP+R+++ W+
Sbjct: 281 GMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWST 338
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
++ G A G + AL F+ M S PN+VT+V VL ACS AG VE G F SM
Sbjct: 339 MVSGLAQNGKSVEALRVFDLMKSQ--GVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKR 396
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+GI+P EH+ C+VDLLGRAG +D A E I M + P +W LL ACR++ L
Sbjct: 397 LFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAA 456
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AA + KL+P+D G VLLSN +A +W +A+ K M+D G++K G SWI ++ R+
Sbjct: 457 YAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRV 516
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H+F A D SH + I L +L +K+ GY+P T F L D+ E+K + +HSEK+A
Sbjct: 517 HVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMA 576
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+ FG + G PIRI KNLRICGDCH+ K +S GR +++RD RFH F DG CSC
Sbjct: 577 IVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCG 636
Query: 584 DYW 586
DYW
Sbjct: 637 DYW 639
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 153/313 (48%), Gaps = 15/313 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ ++PN +TF + A + P +HA +K+G DVFV S D Y K G
Sbjct: 162 MRRDGVAPNAYTFSSVLGACTT---PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGD 218
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++FDEM R+L WN+ I+ G AI+ F+ ++ G + T + L A
Sbjct: 219 LDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRA 278
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +L+ GRQ+H +++ +D ++ + N L+D Y KC + A +F + ++ +SW
Sbjct: 279 CTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISW 336
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG----RSVHA 236
+M+ QN + ++F + +GV P + VL AC+ +E G RS+
Sbjct: 337 STMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKR 396
Query: 237 V-AVKACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ ++ E + + +VD+ G+ G + +A E E + V W ++G +A
Sbjct: 397 LFGIQPEREHH----NCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNA 452
Query: 295 DMALSSFEEMTSM 307
+A + E+ +
Sbjct: 453 SLAAYAAREILKL 465
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 293/439 (66%), Gaps = 2/439 (0%)
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N LVD Y K A VF+ + DK+ +SW S++ V N E ++F R G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P +I++VLSACA + LE G+ VHA +K+ + ++ V ++LV MY KCG I+DA
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+ M ++++ W A+I GYA G +L+ + +M + + P+++T + +L ACS
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVK--PDFITFIGLLFACSH 181
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AG VE G F SM YGIKPG EHYAC++DLLGR+G + A E++ +M ++P +VW
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL ACRV+G ELG AA+NLF+L+P ++ +VLLSN+++A G+WEEA R+ MK G
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K GCSWI + +++H F ++D SH R EI + + ++ +K AGY+PD NFAL+D++
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE K + +HSEK+A+AFGL+ +PPG PIRI KNLRICGDCH+A K++SG+ R VI+R
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+N FH F +G CSCSDYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 46 FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT 105
V + DMY+K G D A +F++M ++++ +W + ++ V G + A+ F +R
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G PD I A L+AC++ ++L+ G+Q+H ++SG ++SV N LV Y KC + A
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
VFD + ++ ++W +++V Y QN + GV+P +L AC+
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 226 AGLELGRSV-----HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLV 279
+E GRS +K E + ++D+ G+ G + +A+ N+M + +
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHY----ACMIDLLGRSGKLMEAKELLNQMAVQPDAT 238
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W A++ G+ ++ + + + + YV L + SA AG E+ K
Sbjct: 239 VWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSA---AGKWEEAAKTRR 295
Query: 340 SMTLK 344
M L+
Sbjct: 296 LMKLR 300
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I P+ + A + L + GKQ+HA LKSG + V S MY+K G
Sbjct: 59 MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGC 118
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+K+FD M +++ TW A I GR + +++ + B+ +G +PD ITF L A
Sbjct: 119 IEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFA 178
Query: 121 CSDCSLLQLGRQ 132
CS L++ GR
Sbjct: 179 CSHAGLVEHGRS 190
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/544 (41%), Positives = 321/544 (59%), Gaps = 10/544 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLR 103
+FV S MY+K GL DDA ++FD MPERN+ TW ++ A GR + A+ + +
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R G P+ TF + L AC +L LH V+ G D +V V + L+D Y K ++
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLD 231
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
+ VFD ++ ++ V W S++ + Q+ + ++F+ + G ++SVL AC
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ LE GR VHA +K E ++ + +AL+DMY KCGS++DAE F++MP+R+++ W+
Sbjct: 292 GMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+I G A G + AL F+ M S E V PN +T+V VL ACS AG VE G F SM
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKS---EGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMK 406
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+GI+P EH+ C+VDLLGRAG +D A E I++M + P +W LL ACR++ L
Sbjct: 407 KLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLA 466
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
AA + KL+P+D G VLLSN +A +W +A+ K M+D G+KK G SWI ++
Sbjct: 467 AYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKH 526
Query: 463 IHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
+H+F A D SH + I L +L + A GY+P T F L D+ E+K + +HSEK+
Sbjct: 527 VHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKM 586
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
A+AFG + G PIRI KNLRICGDCH+ K +S GR +I+RD RFH F DG CSC
Sbjct: 587 AIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSC 646
Query: 583 SDYW 586
DYW
Sbjct: 647 GDYW 650
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ S N T + +A + + + G+Q+HA LK + D+ + + DMY K G
Sbjct: 271 MKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYER--DLILHNALLDMYCKCGS 328
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+ +F MP+R++ +W+ IS G+ A+ F ++ G P+ IT L A
Sbjct: 329 LEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFA 388
Query: 121 CSDCSLLQLGRQLHGFLVRS-----GFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIID 174
CS L++ G + RS G N +VD G+ ++ A + + D ++
Sbjct: 389 CSHAGLVEDG----WYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLE 444
Query: 175 KNDVSWCSML 184
+ V W ++L
Sbjct: 445 PDAVIWRTLL 454
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 353/652 (54%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E +P+ FT + + +A+ G+++H +K G V V S MY K G
Sbjct: 338 MVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
+ A +F+ M R++++WN +S N ++ G +N
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457
Query: 95 AIDAFI------NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+D L + EPD T + L+AC++ +L++G+Q+H +++R+G + +
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517
Query: 149 CNGLVDFYGKCNEVGLAKVV---------------------------------FDGIIDK 175
N L+ Y K V A+ + FD + ++
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ ++W +M+V Y QN + + ++F + G EP +++VLSACA +A L+ G+ +H
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHA 294
A+++ E ++ V +A++ +Y + GS+ A F+++ R + W ++I A G
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FEEM +R P+++T V VLSAC+ AG V+KG + + M ++GI P HY
Sbjct: 698 EQAVVLFEEM--VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHY 755
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDL RAGL+ A+E I+ MP+ P VWG+LL ACRV +L +AA L +DP
Sbjct: 756 ACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDP 815
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SG + L+N+++A GRW +A + K KD G+KK G SW V+ ++H+F A D H
Sbjct: 816 HNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHP 875
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ I ++ EE+K AG++PD N L+DV++E K + HSEK+A+AFGLI+ P
Sbjct: 876 QRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 935
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCH+A KFIS V RE+IVRD RFH F DGYCSC DYW
Sbjct: 936 TTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 190/436 (43%), Gaps = 72/436 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+ F S +Y+K+G DA +F EMP+R+ +W I GR +A+ F+++
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
G P T L++C+ +GR++H F+V+ G V V N ++ YGKC +
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 164 LAKVV-------------------------------FDGIIDKNDVSWCSMLVVYVQNYE 192
A+ V F+ +++++ VSW +++ Y QN
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 193 EENGCQMF---LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + F L+A +EP F ++SVLSACA + L++G+ +H+ ++ + + +
Sbjct: 460 DGMALKFFSRMLSA--SSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517
Query: 250 GSALVDMYGKCGSIQDAE-------------IAFNKMPE--------------------R 276
+AL+ Y K GS++ A I+F + E R
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+++ W A+I GY G D A+ F M + E PN TL VLSAC+ ++ G +
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPE--PNSHTLAAVLSACASLAYLDYGKQ 635
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
I + ++ + ++ + R+G V A + ++ R W +++ A +
Sbjct: 636 I-HCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694
Query: 397 GKPELGRIAADNLFKL 412
G E + + + ++
Sbjct: 695 GLGEQAVVLFEEMVRV 710
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACV---------------------------------- 243
+L C GR++HA AVKA +
Sbjct: 215 LLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDI 274
Query: 244 ---EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N F ++L+ +Y K G + DA + F +MP+R+ V W +I G G A+ +
Sbjct: 275 PYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKT 334
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M S P+ TL VLS+C+ A G K+ + +K G+ V+ +
Sbjct: 335 FLDMVSE--GFAPSQFTLTNVLSSCAAMEACGVGRKV-HPFVVKLGLSSCVPVANSVLYM 391
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
G+ G + A + + M +R ++S W +++ G+ EL +N+ +
Sbjct: 392 YGKCGDAETARAVFERMQVR-SVSSWNVMVSLYTHQGRMELAVSMFENMVE 441
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/662 (35%), Positives = 349/662 (52%), Gaps = 78/662 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG-KQLHALALKSG---------QIHDVFVGCS 50
MR P+DFTF + AS+ + Q+H +K G + V+V C+
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCA 197
Query: 51 AFDMYSKTGLKDDADKMFDEMPERN------LAT-------------------------W 79
+ + S + L A K+FDEMP+RN L T W
Sbjct: 198 SSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAW 257
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
NA IS + G ++A+ F +R G + D T+ + ++AC+D LG+Q+H ++++
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317
Query: 140 SGFDGN----VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV------- 188
+ + + +SV N L+ Y K +V A+ +F + K+ ++W ++L YV
Sbjct: 318 NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEE 377
Query: 189 ------------------------QNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
QN E ++F + +G EP D+ + ++AC+
Sbjct: 378 AKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSV 437
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ LE GR +HA V + + VG+A++ MY +CG ++ A F MP + V WN++
Sbjct: 438 LGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSM 497
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I GH A+ +E+M ++ +P+ T + VLSACS AG VE+G + F SM
Sbjct: 498 IAALGQHGHGVKAIELYEQM--LKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLEN 555
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
YGI PG +HYA ++DL RAG A +I MP +W ALL CR +G +LG
Sbjct: 556 YGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIE 615
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA+ LFKL P G +VLLSNM+A+ GRW + RK M+D G+KK CSW V+N++H
Sbjct: 616 AAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVH 675
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
+F DT H I L KL EMK GYIPDT + L+D+E E K + HSEK+A+
Sbjct: 676 VFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAV 735
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
AFGL+ +P G +R+ KNLRICGDCH+A KF+S +VGRE++VRD RFH F +G CSC +
Sbjct: 736 AFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRN 795
Query: 585 YW 586
YW
Sbjct: 796 YW 797
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 189/440 (42%), Gaps = 65/440 (14%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFIN 101
DV + YS G A ++F+E P R+ +NA I+ +AI+ F
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 102 LRRTGGEPDLITFCAFLNACSDCSL--LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
+R +PD TF + L+A + Q G Q+HG +V+ G + +V N L+ Y KC
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKC 196
Query: 160 ---------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE----------------- 193
+ + A+ +FD + +N+ W +++ YV+N +
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256
Query: 194 --------------ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
E+ +F R GV+ + +SV+SACA LG+ VHA +
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316
Query: 240 KACVEGN----IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
K + + + VG+ L+ +Y K G + A F +MP ++++ WN ++ GY + G +
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A S F +M N +T ++S ++ G E+ +K+F M L G +P +A
Sbjct: 377 EAKSFFAQMPE------KNLLTWTVMISGLAQNGFGEQALKLFNQMKLD-GYEPNDYAFA 429
Query: 356 CVVDLLGRAGLVDRAYEI---IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ G ++ ++ I + T+SV A++ G E R + +
Sbjct: 430 GAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFV 489
Query: 413 DPNDSGNHVLLSNMFAATGR 432
DP V ++M AA G+
Sbjct: 490 DP------VSWNSMIAALGQ 503
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 146/367 (39%), Gaps = 84/367 (22%)
Query: 114 FCAFLNAC--SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
+ A LN C + S L R +HG ++ SGF + N L+D Y K ++ A+ +FD
Sbjct: 14 YFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDE 73
Query: 172 IIDKNDVSWCSMLVVY-----------------------------VQNYEEEN----GCQ 198
I + ++ +++ Y + Y N +
Sbjct: 74 IPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIE 133
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMY 257
+F R +P DF +SVLSA I E +H VK +E V +AL+ +Y
Sbjct: 134 LFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVY 193
Query: 258 GKCGS---------IQDAEIAFNKMPERNL------------------------------ 278
KC S + A F++MP+RN
Sbjct: 194 VKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQP 253
Query: 279 -VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+ WNA+I GY H G + AL+ F +M + + + T V+SAC+ G G ++
Sbjct: 254 GIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQV--DESTYTSVISACADGGFFLLGKQV 311
Query: 338 FYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
++ LK + P + V + L + G VD A +I EMP++ I+ W LL+
Sbjct: 312 -HAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIIT-WNTLLSGY 369
Query: 394 RVYGKPE 400
G+ E
Sbjct: 370 VNAGRME 376
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 342/612 (55%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FTFP + KA+S L G +H +A+K D+++ S Y G A+++
Sbjct: 124 PNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERL 183
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + +++ +WN+ IS G P++A++ F+ + R P+ +T L+AC+ L
Sbjct: 184 FKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDL 243
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML--- 184
+ GR + ++ R G ++++CN ++D Y KC V A+ +FD + +++ SW ML
Sbjct: 244 EFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGY 303
Query: 185 ----------------------------VVYVQNYEEENGCQMFLTARREGV-EPKDFMI 215
Y QN + + +F + + +P + +
Sbjct: 304 AKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTL 363
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
S LSACA++ ++LG +H + + N + S+LVDMY KCGS++ A F + E
Sbjct: 364 VSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEE 423
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R++ W+A+I G G A+ F EM + + PN VT VL ACS AG V++G
Sbjct: 424 RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVK--PNSVTFTNVLCACSHAGLVDEGR 481
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F+ M YG+ P +HYAC+VD+LGRAG ++ A E+I EM P+ SVWGALL AC +
Sbjct: 482 VFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSL 541
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ ELG +A+D L KL+P + G VLLSN++A TGRWE+ +RK M+D +KK GCS
Sbjct: 542 HMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCS 601
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-KMTE 514
I +H F D +H ++ I + L ++ ++K+ GY P+ + L +EE++ K
Sbjct: 602 SIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQA 661
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+AFGL+ + P PIR+ KNLRICGDCH+ K +S + R++++RD RFH
Sbjct: 662 LSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHH 721
Query: 575 FWDGYCSCSDYW 586
F DG+CSC DYW
Sbjct: 722 FRDGHCSCMDYW 733
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 225/458 (49%), Gaps = 50/458 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
K++HA L++G D F SA +++ + L D A +FD++P+ NL TWN I
Sbjct: 42 KEVHARMLRTGLFFDPF---SASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIR 98
Query: 85 NAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
P + F++L + P+ TF + A S+ ++G +HG ++ F
Sbjct: 99 AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
++ + N LV FYG C ++ +A+ +F GI K+ VSW SM+ + Q E+ ++FL
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKM 218
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
RE V P + VLSACA+ LE GR V + + ++ ++ + +A++DMY KCGS+
Sbjct: 219 ERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSV 278
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM--------------------------- 296
DA+ F++MPER++ W ++ GYA G D
Sbjct: 279 DDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNG 338
Query: 297 ----ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL+ F E+ + A P+ VTLV LSAC++ GA++ G I + + GI
Sbjct: 339 KPKEALAIFNELQLSKI-AKPDEVTLVSTLSACAQLGAIDLGGWIHVYIK-REGIVLNCH 396
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+ +VD+ + G +++A E+ + R + VW A++ ++G+ G+ A D F++
Sbjct: 397 LISSLVDMYAKCGSLEKALEVFYSVEER-DVYVWSAMIAGLGMHGR---GKAAIDLFFEM 452
Query: 413 -DPNDSGNHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
+ N V +N+ A G +E + EM+ V
Sbjct: 453 QEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV 490
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/563 (39%), Positives = 336/563 (59%), Gaps = 15/563 (2%)
Query: 33 HALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRP 92
H LKSG ++D F + Y + +DA ++F+EM E N+ ++ + ++ + GRP
Sbjct: 50 HTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRP 109
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
K+A+ F + + P+ TF +NACS + L+ G+++H + G N+ VC+ L
Sbjct: 110 KSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSL 169
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE--GV-- 208
+D YGKCN V A+ VFDG+ +N VSW SM+ Y QN E Q+F RE G+
Sbjct: 170 IDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLF----REFNGLPL 225
Query: 209 -EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P FM++SV++ACA + L G+ HA ++ E N V SALVDMY KCG I ++
Sbjct: 226 SSPNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSD 285
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F ++P+ +++ + ++I G A G +L F+EM R + PN VT V VL ACS
Sbjct: 286 KVFRRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIK--PNDVTFVGVLHACSH 343
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS--V 385
+G V+ G++ +SM K+G+ P +HY CVVD+LGR G +D A+++ K + + P +
Sbjct: 344 SGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALL 403
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WG LL+A R+YG+ ++ A+ L + + + +V +SN +A G+WE +R EMK
Sbjct: 404 WGTLLSASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKH 463
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSH-ERNTEIQAMLTKLREEMKAAGYIPDTN-FAL 503
G+ K GCSW+ +++ ++F A D S R +E+ ++L +L MK GY+ +
Sbjct: 464 YGVYKEPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVS 523
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
DVEEE K VG HSE++ALAFGLI+IP GV IR+ KNLR+C DCH AFK IS IV R+
Sbjct: 524 IDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERD 583
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
+VRD NRFH F +G C+C D+W
Sbjct: 584 FVVRDVNRFHHFENGSCTCRDFW 606
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 158/360 (43%), Gaps = 17/360 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN FTF + A S L TG+++H+ G ++ V S DMY K
Sbjct: 119 MLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNN 178
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG----EPDLITFCA 116
DDA ++FD M RN+ +W + I+ + A+ F R G P+ +
Sbjct: 179 VDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLF---REFNGLPLSSPNHFMLAS 235
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+NAC+ L G+ H ++R G + N V + LVD Y KC +G + VF I D +
Sbjct: 236 VINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPS 295
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVH 235
+ + SM+V + + +F ++P D VL AC+ ++ G +H
Sbjct: 296 VIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLH 355
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM---PERNLVCWNAIIGGYAHQG 292
++ K V + + +VDM G+ G + +A + P++ + W ++ G
Sbjct: 356 SMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYG 415
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPG 350
D+A+ + + + + YVT+ + + AG E I Y M YG+ +PG
Sbjct: 416 RVDIAVEASKWLIESNQQVAAAYVTMS---NTYAMAGKWENVHSIRYEMK-HYGVYKEPG 471
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 323/559 (57%), Gaps = 4/559 (0%)
Query: 30 KQLHALALKSG-QIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+HA +++ G +++ +G F + S + A +F + N+ TWN I
Sbjct: 35 KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P A + + + EPD T+ L A S ++ G +H +R+GF+ V
Sbjct: 95 ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVF 154
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ Y C + A VF+ + +++ V+W SM+ + N +F EG
Sbjct: 155 VQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEG 214
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
VEP F + S+LSA A + LELGR VH +K + N V ++L+D+Y KCG+I++A+
Sbjct: 215 VEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQ 274
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M ERN V W ++I G A G + AL F+EM VP+ +T V VL ACS
Sbjct: 275 RVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGL--VPSEITFVGVLYACSH 332
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +++G + F M + GI P EHY C+VDLL RAGLV +AYE I+ MP++P +W
Sbjct: 333 CGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 392
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC ++G LG IA +L L+P SG++VLLSN++A+ RW + ++R+ M G
Sbjct: 393 TLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDG 452
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK G S + + NR++ F D SH ++ ++ A+L K+ E +K GY+P T L D+E
Sbjct: 453 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIE 512
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EEEK + +HSEK+A+AF L+ PPG PIR+ KNLR+C DCH A K I+ I RE+++R
Sbjct: 513 EEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIR 572
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D +RFH F G CSC DYW
Sbjct: 573 DRSRFHHFRGGSCSCKDYW 591
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 168/350 (48%), Gaps = 8/350 (2%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
C+ P+ T+P L KA S G+ +H++ +++G VFV S +Y+ G + A
Sbjct: 113 CVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESA 172
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+F+ M ER+L WN+ I+ L GRP A+ F + G EPD T + L+A ++
Sbjct: 173 YKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAEL 232
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L+LGR++H +L++ G N V N L+D Y KC + A+ VF + ++N VSW S++
Sbjct: 233 GALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLI 292
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-V 243
V N E ++F +G+ P + VL AC+ L+ G + C +
Sbjct: 293 VGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGI 352
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
I +VD+ + G ++ A MP + N V W ++G GH + +
Sbjct: 353 IPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARS 412
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PG 350
+ ++ + +YV L + ++ R V+ + LK G+K PG
Sbjct: 413 HLLNLEPKHSGDYVLLSNLYASERRWSDVQ----VIRRSMLKDGVKKTPG 458
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ FT L AS+ L G+++H LK G + V S D+Y+K G
Sbjct: 210 MSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGA 269
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F EM ERN +W + I + G + A++ F + G P ITF L A
Sbjct: 270 IREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYA 329
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDK 175
CS C +L G + + G + +VD + GL K ++ I +
Sbjct: 330 CSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA---GLVKQAYEYIQNMPVQP 386
Query: 176 NDVSWCSML 184
N V W ++L
Sbjct: 387 NAVIWRTLL 395
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 325/538 (60%), Gaps = 3/538 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+++HA S D F+ S +Y K G +A K+FD+M +++ +W + I+
Sbjct: 70 ARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQ 129
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P AI + + +P+ TF + L A + +G Q+H V+ + +V V
Sbjct: 130 NDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYV 189
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y +C ++ +A VFD + KN VSW +++ + + + E +F +R G
Sbjct: 190 GSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGF 249
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E F SS+ SA A I LE G+ VHA +K+ + FVG+ ++DMY K GS+ DA
Sbjct: 250 EATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARK 309
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ ++LV WN+++ +A G A+S FEEM + N ++ +C+L+ACS
Sbjct: 310 VFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR--KSGIYLNQISFLCILTACSHG 367
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G K ++ M +Y ++P EHY VVDLLGRAGL++ A I +MPM PT +VWGA
Sbjct: 368 GLVKEG-KHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGA 426
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACR++ ++G+ AAD++F+LDP+DSG VLL N++A+TG W+ A VRK MK G+
Sbjct: 427 LLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGV 486
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK CSW+ ++N +H+F A D +H R EI M ++ +++ GY+PD ++ L V+E
Sbjct: 487 KKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDE 546
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+E+ + +HSEKIALAF LI +P G IRI KN+RICGDCHSAFK+IS + RE+++
Sbjct: 547 QEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVI 604
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 4/289 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P + AF+ AC+ L R++H L S F G+ + N L+ Y KC V A V
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
FD + +K+ VSW S++ Y QN + + +P F +S+L A A
Sbjct: 109 FDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+G +HA+AVK +++VGSAL+DMY +CG + A F+K+ +N V WNA+I G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A +G + AL F EM EA + T + SA + GA+E+G K ++ +K K
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEA--THFTYSSIFSALAGIGALEQG-KWVHAHMIKSRQK 285
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
A ++D+ ++G + A ++ + + + + W ++L A YG
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG 333
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 1/288 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN FTF L KA A G Q+HALA+K DV+VG + DMY++ G
Sbjct: 143 MLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++ +N +WNA IS G + A+ F ++R G E T+ + +A
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSA 262
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L+ G+ +H +++S V N ++D Y K + A+ VF+ +++K+ V+W
Sbjct: 263 LAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTW 322
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML + Q + F R+ G+ +L+AC+ ++ G+ + +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE 382
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+E I +VD+ G+ G + A + KMP E W A++
Sbjct: 383 YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + ++ACA+ L+ R +HA + G+ F+ ++L+ +Y KCGS+ +A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+KM +++V W ++I GYA A+ M R + PN T +L A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFK--PNGFTFASLLKAVGA 164
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G +I +++ +K + ++D+ R G +D A + ++ + +S W
Sbjct: 165 YADSGIGGQI-HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WN 222
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA--------TGRWEEADL 438
AL++ + + G A ++ N H S++F+A G+W A +
Sbjct: 223 ALISG---FARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHM 279
Query: 439 VRKEMK 444
++ K
Sbjct: 280 IKSRQK 285
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/584 (38%), Positives = 334/584 (57%), Gaps = 5/584 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ T + A AL G+++H +K+G + +V V S M+S G
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A+ +F +M ++L +W A IS G P+ A++ + + G PD IT + L+A
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LL G LH F R+G V V N L+D Y KC + A VF I +KN +SW
Sbjct: 407 CAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISW 466
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S+++ NY F ++P + SVLSACARI L G+ +HA A++
Sbjct: 467 TSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALR 525
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + F+ +AL+DMY +CG ++ A FN E+++ WN ++ GYA QG +A+
Sbjct: 526 TGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVEL 584
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + + P+ +T +L ACSR+G V G++ F SM K+ I P +HYA VVDL
Sbjct: 585 FHKM--IESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ AYE IK+MP+ P ++WGALLNACR+Y ELG +AA ++F++D G +
Sbjct: 643 LGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYY 702
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LL N++A +G+W+E VRK M++ + GCSW+ V ++H F D H + EI
Sbjct: 703 ILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEIN 762
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L E+M+A G + D++ + G HSE++A+AFGLI PG PI +T
Sbjct: 763 AVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVT 821
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
KNL +C +CH+ KFIS +V R + VRD +FH F DG CSC D
Sbjct: 822 KNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 216/429 (50%), Gaps = 12/429 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFPC+ + L G+++H ++ G DV V + MY K G A
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD MP R+ +WNA IS + F +R +PDL+T + ++AC
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LGR++HG+++++GF VSV N L+ + A++VF + K+ VSW +M+
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y +N E + + EGV P + I+SVLSACA + L+ G +H A + +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V ++L+DMY KC I A F+++P +N++ W +II G + AL F++M
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI 490
Query: 306 -SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
S++ PN VTLV VLSAC+R GA+ G +I ++ L+ G+ ++D+ R
Sbjct: 491 LSLK----PNSVTLVSVLSACARIGALSCGKEI-HAHALRTGLGFDGFLPNALLDMYVRC 545
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLL 423
G ++ A+ ++ W LL GK G +A + K+ +D + + +
Sbjct: 546 GRMEPAWNQFNS--CEKDVASWNILLTGYAQQGK---GGLAVELFHKMIESDVNPDEITF 600
Query: 424 SNMFAATGR 432
+++ A R
Sbjct: 601 TSLLCACSR 609
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 212/438 (48%), Gaps = 19/438 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +S + T+ L + G ++H+ K+ V +G + M+ + G
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F +M ER+L +WN + G A++ + + G PD+ TF L
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L GR++H ++R GF+ +V V N L+ Y KC ++ A++VFD + ++ +SW
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y +N G ++F R V+P ++SV+SAC + LGR VH +K
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V ++L+ M+ G +AE+ F+KM ++LV W A+I GY G + A+ +
Sbjct: 325 TGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVET 384
Query: 301 FEEMTSMRCE-AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV-- 357
+ T M E VP+ +T+ VLSAC+ G ++KG+ M ++ + G Y V
Sbjct: 385 Y---TIMEHEGVVPDEITIASVLSACAGLGLLDKGI-----MLHEFADRTGLTSYVIVAN 436
Query: 358 --VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV-YGKPELGRIAADNLFKLDP 414
+D+ + +D+A E+ +P + IS W +++ R+ Y E + L P
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVIS-WTSIILGLRLNYRSFEALFFFQQMILSLKP 495
Query: 415 NDSGNHVLLSNMFAATGR 432
N V L ++ +A R
Sbjct: 496 NS----VTLVSVLSACAR 509
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 331/559 (59%), Gaps = 24/559 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H+LA+KS + + DMYSK G D A ++F++M ERN+ +W + I+
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G AI + + G + D++ + L+AC+ L G+ +H ++ + N+ V
Sbjct: 330 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 389
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
CN L+D Y KC + A VF ++ K+ +SW +M+ +
Sbjct: 390 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GEL 428
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P ++ +L ACA ++ LE G+ +H ++ + V +ALVD+Y KCG + A +
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P ++LV W +I GY G+ + A+++F EM E P+ V+ + +L ACS +
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE--PDEVSFISILYACSHS 546
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G +E+G + FY M + I+P EHYAC+VDLL R G + +AY+ I+ +P+ P ++WGA
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL CR+Y EL A+ +F+L+P ++G +VLL+N++A + EE +R+++ G+
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGL 666
Query: 449 KKGAGCSWISVKNRIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+K GCSWI +K R+++F ++SH + +I+++L K+R +MK GY P T +AL + +
Sbjct: 667 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E +K + HSEK+A+AFGL+ +PP IR+TKNLR+CGDCH KF+S RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DGYCSC +W
Sbjct: 787 DSNRFHHFKDGYCSCRGFW 805
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 169/336 (50%), Gaps = 25/336 (7%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++ +R++ +WN+ IS V G + + + + G + DL T + L C
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
++ L LG+ +H ++S F+ ++ N L+D Y KC ++ A VF+ + ++N VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + + +EGV+ I+S+L ACAR L+ G+ VH
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ N+FV +AL+DMY KCGS++ A F+ M ++++ WN ++G
Sbjct: 382 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--------------- 426
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E P+ T+ C+L AC+ A+E+G +I + L+ G +VDL
Sbjct: 427 --------ELKPDSRTMACILPACASLSALERGKEI-HGYILRNGYSSDRHVANALVDLY 477
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G++ A + +P + +S W ++ ++G
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVS-WTVMIAGYGMHG 512
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 160/372 (43%), Gaps = 63/372 (16%)
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
+ + +NA I + G +NA++ +++ E + T+ + L C+ L G++
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSLTDGKK 120
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG--------------------- 171
+H + + + ++ LV FY C ++ + VFD
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 172 ------------------------------IIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+ D++ +SW SM+ YV N E G ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
G++ I SVL CA L LG++VH++A+K+ E I + L+DMY KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVC 320
+ A F KM ERN+V W ++I GY G +D A+ ++M E V + V +
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK---EGVKLDVVAITS 357
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMP 378
+L AC+R+G+++ G + + + + C ++D+ + G ++ A + M
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKAN---NMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 414
Query: 379 MRPTISVWGALL 390
++ IS W ++
Sbjct: 415 VKDIIS-WNTMV 425
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T C+ A ++L GK++H L++G D V + D+Y K G+ A
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD +P ++L +W I+ + G AI F +R G EPD ++F + L ACS
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 126 LLQLGRQLHGFLVRSGFD 143
LL+ G + +++++ F+
Sbjct: 548 LLEQGWRFF-YIMKNDFN 564
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 57/269 (21%)
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
ID + + ++ + Q + EN ++ ++ +E K + SVL CA + L G+
Sbjct: 62 IDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTY--GSVLQLCAGLKSLTDGK 119
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD--------------------------- 265
VH++ V + +G LV Y CG +++
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 266 ------------------------AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
A F+K+ +R+++ WN++I GY G + L +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M + + + T++ VL C+ +G + G K +S+ +K + ++D+
Sbjct: 240 KQMMYLGIDV--DLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +D A + ++M R +S W +++
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVS-WTSMI 324
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/538 (39%), Positives = 316/538 (58%), Gaps = 7/538 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR 104
+F+ +MY K L +DA ++FD+MP+RN+ +W IS + A++ + + R
Sbjct: 48 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G P++ T+ + L AC+ S + R LH +++ G + +V V + L+D + K E
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPED 164
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A VFD ++ + + W S++ + QN + ++F +R G + ++SVL AC
Sbjct: 165 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 224
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+A LELG H VK + ++ + +ALVDMY KCGS++DA FN+M ER+++ W+ +
Sbjct: 225 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G A G++ AL FE M S + PNY+T+V VL ACS AG +E G F SM
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTK--PNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 340
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
YGI PG EHY C++DLLG+AG +D A +++ EM P W LL ACRV L
Sbjct: 341 YGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 400
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA + LDP D+G + +LSN++A + +W+ + +RK M+D+GIKK GCSWI V +IH
Sbjct: 401 AAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIH 460
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F D SH + E+ L +L + GY+P+TNF L D+E E+ + HHSEK+AL
Sbjct: 461 AFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 520
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
AFGL+ +P IRI KNLRICGDCH K S + R +++RD R+H F DG CSC
Sbjct: 521 AFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 15/355 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + PN +T+ + +A + + + LH +K G DV+V + D+++K G
Sbjct: 105 MLRDGVRPNVYTYSSVLRACNGMS---DVRMLHCGIIKEGLESDVYVRSALIDVFAKLGE 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FDEM + WN+ I R A++ F ++R G + T + L A
Sbjct: 162 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +LL+LG Q H +V+ +D ++ + N LVD Y KC + A+ VF+ + +++ ++W
Sbjct: 222 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITW 279
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG----RSVHA 236
+M+ QN + ++F + G +P I VL AC+ LE G RS+
Sbjct: 280 STMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 339
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ G G ++D+ GK G + DA N+M E + V W ++G Q +
Sbjct: 340 LY--GINPGREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV 396
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+A + +++ ++ E Y L + + + +VE+ K + +K +PG
Sbjct: 397 LAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKK--EPG 449
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 9/291 (3%)
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
+L+ G D T+ + C + G + L +G + + N L++ Y K N
Sbjct: 3 SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ A +FD + +N +SW +M+ Y + + ++ + R+GV P + SSVL
Sbjct: 63 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
AC G+ R +H +K +E +++V SAL+D++ K G +DA F++M + +
Sbjct: 123 AC---NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
WN+IIGG+A +D+AL F+ M R + TL VL AC+ +E GM+
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMK--RAGFIAEQATLTSVLRACTGLALLELGMQAHVH 237
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ +KY + +VD+ + G ++ A + +M R I+ W +++
Sbjct: 238 I-VKYDQDLILNN--ALVDMYCKCGSLEDARRVFNQMKERDVIT-WSTMIS 284
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 337/587 (57%), Gaps = 16/587 (2%)
Query: 13 FPCLFKASSALHIPVTGKQ---------LHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
PC +A A+HI K HA K G ++D + Y +
Sbjct: 1 MPCYHQAR-AVHIIQQLKNCKDFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQY 59
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FDEM E N+ +W + +S V GRP++A+ + + + P+ T +N+CS
Sbjct: 60 AHHLFDEMHEPNVVSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSI 119
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L+ G+ +H + G GN+ VC+ LVD YGKCN+V A++VFD + +N VSW +M
Sbjct: 120 LADLKTGKMVHAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAM 179
Query: 184 LVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
+ Y QN + ++F +E P FM++SV++ACA + L G+ H ++
Sbjct: 180 IAGYAQNGKGYEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGG 239
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
E N V SALVDMY KCGS +E F ++ +++ + ++I G A G ++L+ FE
Sbjct: 240 YELNDVVASALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFE 299
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
EMT + +PN VT V +L ACS +G V++G+++ SM K+G+ P HY CVVD+L
Sbjct: 300 EMTDRK--VMPNDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLS 357
Query: 363 RAGLVDRAYEIIKEMPMRPT--ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
R G +D AY++ K + + P +WG LL++ R++G+ ++ A+ L + + +G +
Sbjct: 358 RVGRLDEAYKLAKSIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAY 417
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN + G WE A +R EM+ VG+ K GCSWI +K+ I++F A D S ER E+
Sbjct: 418 VTLSNTYTLAGEWENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDLSCERGDEVI 477
Query: 481 AMLTKLREEMKAAGYIP-DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
++L +L M G + T DVE+E K VG HSE++ALAFGLI+IP GV IR+
Sbjct: 478 SLLRELERRMMERGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRV 537
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH AFK IS IV R+ +VRD NRFH F DG C+C D+W
Sbjct: 538 MKNLRICSDCHEAFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 140/328 (42%), Gaps = 15/328 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +SPN FT + + S L TGK +HA G ++ V S DMY K
Sbjct: 98 MSESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILGLQGNLVVCSSLVDMYGKCND 157
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLN 119
D A +FD M RN+ +W A I+ G+ A++ F E P+ + +N
Sbjct: 158 VDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEALEVFREFSSYMMERPNHFMLASVIN 217
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L G+ HG ++R G++ N V + LVD Y KC ++ VF I + + +
Sbjct: 218 ACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDMYAKCGSFLYSEKVFRRIRNPSVIP 277
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA----GLELGRSVH 235
+ SM+V + + +F V P D +L AC+ GL L S+H
Sbjct: 278 YTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPNDVTFVGILHACSHSGLVDEGLRLLNSMH 337
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDA-----EIAFNKMPERNLVCWNAIIGGYAH 290
K V ++ + +VDM + G + +A I N P + W ++
Sbjct: 338 E---KHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIRVN--PNEGALLWGTLLSSSRL 392
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTL 318
G DMA+ + + + + YVTL
Sbjct: 393 HGRVDMAVEASKWLIEYNQQVAGAYVTL 420
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/620 (36%), Positives = 347/620 (55%), Gaps = 37/620 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E +S N TF + + L V G Q+ ++ G V V S M+S
Sbjct: 467 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 526
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +FD M E ++ +WNA IS G + ++ F +R E + T + L+
Sbjct: 527 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 586
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+ GR +HG +V+ G D NV +CN L+ Y + A++VF + +++ +SW
Sbjct: 587 CSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 646
Query: 181 CSMLVVYVQ----------------------------------NYEEENGCQMFLTARRE 206
SM+ YVQ N E + + R +
Sbjct: 647 NSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 706
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ P +++ L+A A +A LE G+ +H + +K E ++ V +A +DMYGKCG + D
Sbjct: 707 GI-PANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDV 765
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ R+ + WN +I +A G A +F EM ++ P++VT V +LSAC+
Sbjct: 766 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEM--LKLGPKPDHVTFVSLLSACN 823
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G V++G+ + SMT ++G+ PG EH C++DLLGR+G + A IKEMP+ P W
Sbjct: 824 HGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAW 883
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
+LL ACR++G EL R A++L +LDP+D +VL SN+ A +G+WE+ + +RKEM
Sbjct: 884 RSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSN 943
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
IKK CSW+ +K+++H F + H + + I A L +L + K AGY+PDT+FAL+D+
Sbjct: 944 NIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDM 1003
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+EE+K + +HSE++ALAFGLI P +RI KNLR+CGDCHS +KF+SGIVGR++++
Sbjct: 1004 DEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVL 1063
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD RFH F G CSC DYW
Sbjct: 1064 RDPYRFHHFSGGKCSCGDYW 1083
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 212/457 (46%), Gaps = 38/457 (8%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
+ PN F L A S + ++ G Q+H +K+G + DV+VG + Y GL +A
Sbjct: 370 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 429
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+F+EMP+ N+ +W + + G P ++ + +R+ G + TF ++C
Sbjct: 430 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 489
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LG Q+ G +++ GF+ +VSV N L+ + + V A VFD + + + +SW +M+
Sbjct: 490 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 549
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y + + F R E +SS+LS C+ + L+ GR +H + VK ++
Sbjct: 550 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 609
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
N+ + + L+ +Y + G +DAE+ F M ER+L+ WN+++ Y G L E+
Sbjct: 610 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 669
Query: 305 TSM-------------------------------RCEAVP-NYVTLVCVLSACSRAGAVE 332
M R + +P NY+T+V L+A + +E
Sbjct: 670 LQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLE 728
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G ++ + + +K G + +D+ G+ G + +++ + R +S W L++A
Sbjct: 729 EGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS-WNILISA 786
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+G + R + KL P +HV ++ +A
Sbjct: 787 FARHGCFQKARETFHEMLKLGPKP--DHVTFVSLLSA 821
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 184/398 (46%), Gaps = 41/398 (10%)
Query: 34 ALALKSGQIHD--VFVGCSAFDMYSKTGLKDDADKMFDEMPERNL--------------- 76
+ AL +G H+ +G + DMY+K+G +DA + FDEM E+N+
Sbjct: 262 STALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGY 321
Query: 77 ------------------ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A+W+ +S V G + A+ F + G EP+ + +
Sbjct: 322 GHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 381
Query: 119 NACSDCSLL-QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
ACS + G Q+HGF+V++G G+V V LV FYG V A+ +F+ + D N
Sbjct: 382 TACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNV 441
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW S++V Y + ++ R+EGV ++V S+C + LG V
Sbjct: 442 VSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGH 501
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ E ++ V ++L+ M+ S+++A F+ M E +++ WNA+I YAH G +
Sbjct: 502 IIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES 561
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M + E N TL +LS CS ++ G I + + +K G+ +
Sbjct: 562 LRCFHWMRHLHNET--NSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKLGLDSNVCICNTL 618
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+ L AG + A + + M R IS W +++ AC V
Sbjct: 619 LTLYSEAGRSEDAELVFQAMTERDLIS-WNSMM-ACYV 654
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 182/431 (42%), Gaps = 95/431 (22%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
D +SK G +DA +F M ER++ +WNA I + G ++ F ++ R G PD
Sbjct: 135 DFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCY 194
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGF------------------------------ 142
T + L A ++ L + Q+HG + + G+
Sbjct: 195 TLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM 254
Query: 143 -----------------DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+G ++ N L+D Y K E+ AK FD + +KN +SW S++
Sbjct: 255 LKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLIS 314
Query: 186 VYVQN-----------------------------------YEEENG--CQMFLTARREGV 208
Y ++ YEE G CQM+ GV
Sbjct: 315 GYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL----GV 370
Query: 209 EPKDFMISSVLSACARIAGL-ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
EP FM++S+++AC+R + + G VH VK + G+++VG+ALV YG G + +A+
Sbjct: 371 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 430
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACS 326
F +MP+ N+V W +++ GY+ G+ L+ ++ MR E V N T V S+C
Sbjct: 431 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQR---MRQEGVSGNQNTFATVTSSCG 487
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G ++ ++YG + ++ + V+ A + M IS W
Sbjct: 488 LLEDQVLGYQVL-GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS-W 545
Query: 387 GALLNACRVYG 397
A+++A +G
Sbjct: 546 NAMISAYAHHG 556
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 148/353 (41%), Gaps = 70/353 (19%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+P L + L C D + G +H L+ +GF ++ + L+ FY K +V A+
Sbjct: 29 DPSL--YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VFDG+ +++ VSW +M+ Y QN E +F R GV+
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH--------------- 131
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
ALVD + KCG ++DA F M ER++V WNA+IGG
Sbjct: 132 ------------------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 167
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT-LKYG 346
YA QG AD + F M +R VP+ TL VL A + G + +I +T L YG
Sbjct: 168 YAVQGFADDSFCMFRSM--LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG 225
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
Y V GL+ AY K +R + +L + A
Sbjct: 226 ------SYDIVT------GLLINAYA--KNGSLRSAKDLRKGMLKKDLFSSTALITGYAH 271
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
+ ++ + GN ++ +M+A +G E+A EM++ + SW S+
Sbjct: 272 EGIYTM-----GNALI--DMYAKSGEIEDAKRAFDEMEEKNV-----ISWTSL 312
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +H + +G D+ + Y K G A +FD MPER++ +W A +S
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + A F ++R G V
Sbjct: 109 NGRFEKAFVLFSDMRHCG---------------------------------------VKA 129
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY-VQNYEEENGCQMFLTARREG 207
+ LVDF+ KC ++ A +F +++++ VSW +M+ Y VQ + +++ C MF + R G
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFC-MFRSMLRGG 188
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + SVL A A GL + +H + + V L++ Y K GS++ A+
Sbjct: 189 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQG 292
M +++L A+I GYAH+G
Sbjct: 249 DLRKGMLKKDLFSSTALITGYAHEG 273
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 322/569 (56%), Gaps = 28/569 (4%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
KQ HAL L++G + D ++ S Y+ + + ++FD + + N+ WN I
Sbjct: 72 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 131
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
+ P AI + + P+ T+ A L ACSD ++ G Q+H LV+ G G
Sbjct: 132 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 191
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFD---GIIDK---NDVSWCSMLVVYVQNYEEENGCQ 198
+ + + + Y + A+ + D G +D D C M +
Sbjct: 192 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFM-----------EALE 240
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+F ++E + P+ F++ SVLSACA + L+ GR +H A + ++ + +G++LVDMY
Sbjct: 241 IFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 300
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG I A F KM + + WNA+IGG A G A+ A+ F +M + PN +T
Sbjct: 301 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-----DINPNEITF 355
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V VL+AC+ G V+KG+ IF SM +YG++P EHY C+VDLLGRAGL+ A +++ +P
Sbjct: 356 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 415
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
PT +VWGALL ACR +G ELG L +L+P +SG + LLSN++A GRWEE
Sbjct: 416 TEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 475
Query: 439 VRKEMKDVGIKKGAGCSWISV-KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
VRK MK+ GIK G S I + + +H F D SH + +I ML K++E ++ GY P
Sbjct: 476 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEP 535
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
D + L+D++EEEK T V HSEK+A+ FGLI PG IRI KNLR+C DCHSA K IS
Sbjct: 536 DPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLIS 595
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ RE+IVRD R+H F +G CSC D+W
Sbjct: 596 QVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 31/343 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN +T+P + KA S + G Q+HA +K G D + SA MY+ G +A ++
Sbjct: 156 PNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 215
Query: 68 FDE---------MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
D+ MP+R G A++ F +++ P + L
Sbjct: 216 LDDKGGEVDAVCMPDRK--------------GCFMEALEIFHQMQKEKIRPRKFVLPSVL 261
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+AC++ L GR +H + R+ + + LVD Y KC + LA VF+ + +K
Sbjct: 262 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 321
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + E+ +F + + P + VL+ACA ++ G ++ +++
Sbjct: 322 SWNAMIGGLAMHGRAEDAIDLF---SKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSM 378
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ VE I +VD+ G+ G + +AE + +P E W A++G G+ ++
Sbjct: 379 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 438
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + + + Y L + + R G V K MK
Sbjct: 439 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMK 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 39/279 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E I P F P + A + L G+ +H A ++ D +G S DMY+K G
Sbjct: 245 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 304
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F++M + +++WNA I + GR ++AID F + P+ ITF LNA
Sbjct: 305 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF---SKMDINPNEITFVGVLNA 361
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ L+Q G + + + G + + +VD G+ + A+ V I
Sbjct: 362 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI------- 414
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
EP + ++L AC + +ELG V + +
Sbjct: 415 ---------------------------PTEPTPAVWGALLGACRKHGNVELGERVGKILL 447
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
+ + N + L ++Y K G ++ M ER +
Sbjct: 448 ELEPQ-NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 485
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/540 (40%), Positives = 317/540 (58%), Gaps = 8/540 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKD----DADKMFDEMPERNLATWNAYISNA 86
Q+ + + VF D+YSK + K+F+ MP+R++ +WN IS
Sbjct: 112 QMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGN 171
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G ++A+ + PD T + L ++ L G+++HG+ +R+G+D +V
Sbjct: 172 AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADV 231
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+ + L+D Y KC V + VF + + +SW S++ VQN + G + F
Sbjct: 232 FIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIA 291
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++P SS++ ACA + L LG+ +H +++ +GN+F+ SALVDMY KCG+I+ A
Sbjct: 292 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTA 351
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSAC 325
F+KM ++V W A+I GYA GHA A+S F+ M E V PNYV + VL+AC
Sbjct: 352 RWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM---EVEGVKPNYVAFMAVLTAC 408
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG V++ K F SMT Y I PG EHYA V DLLGR G ++ AYE I +M + PT SV
Sbjct: 409 SHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSV 468
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W LL ACRV+ EL + LF +DP + G +VLLSN+++A GRW++A +R M+D
Sbjct: 469 WSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRD 528
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK CSWI +KN++H F A D SH I L L E+M+ GY+ DT L+D
Sbjct: 529 KGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHD 588
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
VEEE+K + HSE++A+ FG+I+ P G IR+TKNLR+C DCH+A KFIS IVGRE++
Sbjct: 589 VEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV 648
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 167/325 (51%), Gaps = 4/325 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT + + + GK++H A+++G DVF+G S DMY+K DD+
Sbjct: 192 LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC 251
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +P+ + +WN+ I+ V G + F + +P+ ++F + + AC+ +
Sbjct: 252 RVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 311
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+QLHG+++RS FDGNV + + LVD Y KC + A+ +FD + + VSW +M++
Sbjct: 312 TLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIM 371
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVAVKACV 243
Y + + +F EGV+P +VL+AC+ AGL E + +++ +
Sbjct: 372 GYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH-AGLVDEAWKYFNSMTQDYRI 430
Query: 244 EGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ +A+ D+ G+ G +++A E + E W+ ++ + ++A +
Sbjct: 431 IPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSK 490
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSR 327
++ ++ + + YV L + SA R
Sbjct: 491 KLFTVDPQNIGAYVLLSNIYSAAGR 515
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 135/344 (39%), Gaps = 60/344 (17%)
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
+G PD F + L +C+ L+ G +HG ++R G ++ CN L++ Y K +
Sbjct: 4 SGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSL-- 61
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-- 222
EE G Q F ++ G P+ I ++
Sbjct: 62 ----------------------------EEGGVQRFCDSKMLGGIPEPREIGKCSNSHDL 93
Query: 223 -----ARIAGLELGRSVHAVA---VKACVEGNIFVGSALVDMYGK-------CGSIQDAE 267
R+AG++ ++ ++ + +F D+Y K GS++
Sbjct: 94 PCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK-- 151
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F MP+R++V WN +I G A G + AL EM + + P+ TL VL +
Sbjct: 152 -VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGN--ADLRPDSFTLSSVLPIFAE 208
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ KG +I + ++ G + ++D+ + VD + + +P IS W
Sbjct: 209 YVNLLKGKEI-HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS-WN 266
Query: 388 ALLNACRVYGKPELGRIAADNLF--KLDPNDSGNHVLLSNMFAA 429
+++ C G + G + K+ P NHV S++ A
Sbjct: 267 SIIAGCVQNGMFDEGLKFFQQMLIAKIKP----NHVSFSSIMPA 306
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 324/587 (55%), Gaps = 37/587 (6%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA+ + G H + Y+ G D + +F ++ W A I L G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A++ + + G EP+ TF + L C ++ G+ LH V+ GFD ++ V
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163
Query: 151 GLVDFYG-------------------------------KCNEVGLAKVVFDGIIDKNDVS 179
GL+D Y K E+ A+V+FDG+ +++ V
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W M+ Y QN +F + +P + + SVLSAC ++ LE GR VH+
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
++ N+ VG+ALVDMY KCGS++DA + F+K+ ++++V WN++I GYA G + AL
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M M P +T + +LSAC +G V +G IF M +YGI+P EHY C+V+
Sbjct: 344 LFKSMCRMGLH--PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN 401
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG V++AYE++K M + P +WG LL ACR++GK LG + L + +SG
Sbjct: 402 LLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGT 461
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN++AA G W+ +R MKD G+KK GCS I V N++H F A +H + EI
Sbjct: 462 YILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEI 521
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
ML ++ +K+ GY P T+ L+D+ E EK + HSEK+A+AFGLI PG I+I
Sbjct: 522 YMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKI 581
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH K IS I GR+++VRD NRFH F +G CSC DYW
Sbjct: 582 VKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 39/367 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M + + PN FTF + K P+ GK LH+ A+K G D++V D+Y++ G
Sbjct: 119 MLTQGVEPNAFTFSSILKLC-----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGG 173
Query: 60 LKDDADKMFDEMPERNLAT-------------------------------WNAYISNAVL 88
A ++FD MPE++L + WN I
Sbjct: 174 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 233
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P A+ F + + +P+ +T + L+AC L+ GR +H ++ +G NV V
Sbjct: 234 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 293
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LVD Y KC + A++VFD I DK+ V+W SM+V Y + + Q+F + R G+
Sbjct: 294 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 353
Query: 209 EPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDA- 266
P + +LSAC + G + + + + +E I +V++ G+ G ++ A
Sbjct: 354 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 413
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E+ N E + V W ++G G + E + Y+ L + +A
Sbjct: 414 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 473
Query: 327 RAGAVEK 333
V +
Sbjct: 474 NWDGVAR 480
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 329/580 (56%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FTFP L K + L GK LH +K D+++ + +MY+ G A +
Sbjct: 77 PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ M RN W + IS + P A+ + + G PD +T ++AC++ L
Sbjct: 137 FERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL 196
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+G +LH + + + LV+ Y KC ++ A+ VFD + DK+ +W +++ Y
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGY 256
Query: 188 VQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
V+N Q+F A + P + I +V+SACA++ LE GR VH + +
Sbjct: 257 VKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS 316
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + ++L+DM+ KCG I A+ F+ M ++L+ WN+++ G A G AL+ F M +
Sbjct: 317 VSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQT 376
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ +T + VL+ACS AG V++G K+FY + YG++ +EHY C+VDLL RAGL
Sbjct: 377 TDLQ--PDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGL 434
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ A E I+ MP++P ++WG++L ACRVY ELG AA L +L+P + G ++LLSN+
Sbjct: 435 LAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNI 494
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A W E VR+ M + GI+K GCS + + N H F A D SH EI ML ++
Sbjct: 495 YARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQV 554
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
RE++K GY+ DT+ L ++++ +K V HSEK+AL +GL+ G I I KNLR+C
Sbjct: 555 REKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVC 614
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+ K +S I R++ +RD NRFH F DG CSC DYW
Sbjct: 615 SDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 178/347 (51%), Gaps = 15/347 (4%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
++ TWN+ + V P+ A+ ++ L R+ PD TF + L C+ ++G+ L
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
HG +V+ ++ + L++ Y C ++ A+ +F+ + +N V W SM+ Y++N+
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
++ +G P + +++++SACA + L +G +H+ + ++ +GSAL
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM---TSMRCE 310
V+MY KCG ++ A F+++ ++++ W+A+I GY + AL F E+ ++MR
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR-- 279
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN VT++ V+SAC++ G +E G + Y + G + ++D+ + G +D
Sbjct: 280 --PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGDIDA 335
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
A I M + IS W +++N ++G LGR A + D
Sbjct: 336 AKRIFDSMSYKDLIS-WNSMVNGLALHG---LGREALAQFHLMQTTD 378
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 345/616 (56%), Gaps = 39/616 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+FTFP L + + L G ++H+ +K G D+FV + +YS G + A +
Sbjct: 109 PNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTL 168
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDE R+L ++N I +P++A+ F ++ +G PD TF A + CS +
Sbjct: 169 FDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEP 228
Query: 128 QLGRQLHGFLVRS--GFDGNVSVCNGLVDFYGK--------------------------- 158
+G+Q+H + ++ D N+ + + +VD Y K
Sbjct: 229 NVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMV 288
Query: 159 -----CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
C E+ +A+ +F+ + +++ +SW +M+ Y Q + ++F G++P +
Sbjct: 289 CGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEV 348
Query: 214 MISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ +VLSACAR+ +LG+ + H N + +A++DMY KCGSI A F +
Sbjct: 349 TLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRR 408
Query: 273 MPE--RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ + + +N++I G A G + A++ F E+ S + P+ VT V VL AC +G
Sbjct: 409 VGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLK--PDEVTFVGVLCACGHSGL 466
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+E+G K+F SM YGIKP EHY C+VDLLGR G ++ AY+++++MP +W ALL
Sbjct: 467 IEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALL 526
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
+ACR +G ++G IA L +++ +VLLSN+ A +WEEA VRK M+D GI+K
Sbjct: 527 SACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRK 586
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
G S+I + IH F A D SH + EI+ ML + +K+AGY+P+T ++D++EEE
Sbjct: 587 PPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEE 646
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + V +HSEK+ALAFGL+ P IRI KNLRIC DCH AFK +S I GRE+ VRD
Sbjct: 647 KESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTM 706
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F +G CSC D+W
Sbjct: 707 RFHHFRNGSCSCMDFW 722
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 40/387 (10%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK---MFDEMPERNLATWNAYISN 85
G Q+HA + +G H +F +S G KD D +F ++ NL WN I
Sbjct: 25 GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84
Query: 86 AVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P+ AI ++++ G P+ TF LN+C+ S L+ G ++H +++ GF+
Sbjct: 85 YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
++ V N L+ Y + LA+ +FD + ++ VS+ +M+ Y + + E+ +F +
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK--ACVEGNIFVGSALVDMYGKCGS 262
G+ P +F ++ S C+ + +G+ +HA K ++ NI + SA+VDMY KCG
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264
Query: 263 IQDAEIA--------------------------------FNKMPERNLVCWNAIIGGYAH 290
I AE FN M ER+++ W A+I GY+
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G AL F+EM ++ + P+ VTLV VLSAC+R GA + G ++++
Sbjct: 325 AGQCSEALELFKEMEALGIK--PDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQN 382
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEM 377
A V+D+ + G +D A EI + +
Sbjct: 383 TILTAAVMDMYAKCGSIDSALEIFRRV 409
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 185/430 (43%), Gaps = 57/430 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKT 58
M+ I P++FTF LF S L+ P GKQ+HA K+ + D + + + DMY+K
Sbjct: 203 MQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKC 262
Query: 59 GLKDDAD--------------------------------KMFDEMPERNLATWNAYISNA 86
GL + A+ K+F+ M ER++ +W A IS
Sbjct: 263 GLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGY 322
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGN 145
G+ A++ F + G +PD +T A L+AC+ LG++L+ + +G F+ N
Sbjct: 323 SQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQN 382
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFD--GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ ++D Y KC + A +F G K + SM+ Q+ E +F
Sbjct: 383 TILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFREL 442
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSV-----HAVAVKACVEGNIFVGSALVDMYG 258
G++P + VL AC +E G+ + +A +K +E +VD+ G
Sbjct: 443 ISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHY----GCMVDLLG 498
Query: 259 KCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A KMP E N V W A++ G+ + + +++ M + YV
Sbjct: 499 RYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVL 558
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE----- 372
L +L+ ++ + K+ ++ KP Y + + R D+++
Sbjct: 559 LSNILADANQWEEARQVRKVMEDHGIR---KPPGWSYIELGGAIHRFVASDKSHPQGKEI 615
Query: 373 --IIKEMPMR 380
++K+M MR
Sbjct: 616 ELMLKDMAMR 625
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 333/589 (56%), Gaps = 10/589 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG-------KQLHALALKSGQIHDVFVGCSAFDMYSKT 58
+SP F + SAL ++ + LH +KS + F+G Y +
Sbjct: 27 LSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVEL 86
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAF 117
G DA ++FDE+P+++L +WN+ IS + +R G +P+ +T
Sbjct: 87 GCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPV 146
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
++AC+ L +G+ +HG V+SG V V N L++ YGKC + A +F+G+ ++
Sbjct: 147 VSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSL 206
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW SM+ V+V E G F+ RR G+ + S+L AC + +L +VH
Sbjct: 207 VSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGY 266
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ ++GN+ + +AL+D+Y K G++ D+ F M + V W A++ YA G A
Sbjct: 267 ILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREA 326
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ FE M +R VP++VT +LSACS +G VE+G F M YG++ EHY+C+
Sbjct: 327 IEHFELM--VREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCM 384
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGR+G ++ AY++IK MPM P VWGAL+ ACRV G ELG+ A+ LF LDP+DS
Sbjct: 385 VDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDS 444
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
N++ LSNM++A G+W +A VR MK+ + + GCS+I N+IH F D SH
Sbjct: 445 RNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTE 504
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L +L + + G+ T + L+DV+EE K + HSEK+A+AFGL+ G+P+
Sbjct: 505 QIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPL 564
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
ITKN+RICGDCH K IS I R +I+RD RFH F +G CSC DYW
Sbjct: 565 IITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I+ + T L A L + + +H L G ++ + + D+Y+K G
Sbjct: 232 MRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGT 291
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K+F M + W A +S+ + GR + AI+ F + R G PD +TF L+A
Sbjct: 292 LSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSA 351
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ G+ + G + V + +VD G+ + A K++ ++ N
Sbjct: 352 CSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSG 411
Query: 179 SWCSML 184
W +++
Sbjct: 412 VWGALI 417
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 318/580 (54%), Gaps = 35/580 (6%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ +TFPC+ KA S L G Q+H +K G ++F+G + MY K G +A K
Sbjct: 134 NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ D+MP R++ +WN+ ++ G+ +A L C +
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDA----------------------LEICKEMDS 231
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L L D V Y V +F+ + KN +SW M+ +
Sbjct: 232 LNLNH-----------DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAI 280
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YV N +FL G++P I+S+L AC ++ L LGR +H K ++ N
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPN 340
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMY KCG +++A F+KM R++V W +++ Y G A++ F +M
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM-- 398
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ + V VLSACS G +++G F MT +YGI P EH+AC+VDL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
V+ AY IK+MPM P VWGALL+ACRV+ K ++G +AAD LF+L P SG +VLLSN+
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A G W++ VR MK +GIKK G S + + ++H F A D H + I L L
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVL 578
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+MK GYIP T AL+DVE E+K + HSEK+A+ F ++ G PIRITKNLR+C
Sbjct: 579 VGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVC 638
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH A K IS IV R +IVRD NRFH F +G CSC DYW
Sbjct: 639 GDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 11/298 (3%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L+ Y E +A+ +FD ++KN V + M+ YV N +F P
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ VL AC+ + L +G VH VK ++ N+F+G+ALV MYGKCG +++A +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+MP R++V WN+++ GYA G D AL +EM S+ + + + + V
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGA 388
+ +F MT K I + ++ + + + A + +M M+P +
Sbjct: 257 QYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIAS 311
Query: 389 LLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
LL AC LGR + K L PN + LL +M+A G EEA V +M+
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 151/348 (43%), Gaps = 40/348 (11%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
YS G A +FD E+N+ +N I + V A+ F + PD TF
Sbjct: 81 YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L ACS L++G Q+H +V+ G D N+ + N LV YGKC + A+ V D +
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ VSW SM+ Y Q+ + ++ L C + L L
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDA----------------------LEICKEMDSLNLNHDA 238
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+A + V Y ++Q F +M ++NL+ WN +I Y +
Sbjct: 239 GTMA-----------SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+S F +M C P+ VT+ +L AC A+ G ++ + K ++P
Sbjct: 288 NEAVSLFLQME--ECGMKPDAVTIASLLPACGDLSALFLGRRL-HKYIEKGNLQPNLLLE 344
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
++D+ + G ++ A ++ +M +R +S W ++++A YG+ G
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMMSA---YGRSGQG 388
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 4 EC-ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
EC + P+ T L A L G++LH K ++ + + DMY+K G +
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLE 358
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+A +FD+M R++ +W + +S G+ +A+ F + +G PD I F + L+ACS
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACS 418
Query: 123 DCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSW 180
LL GR + G + +VD +G+ EV A + ++ N+ W
Sbjct: 419 HTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVW 478
Query: 181 CSML 184
++L
Sbjct: 479 GALL 482
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/581 (38%), Positives = 332/581 (57%), Gaps = 8/581 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P TF + K+ ++L + LH LKSG + V + +K DDA +
Sbjct: 302 PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSL 361
Query: 68 FDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F M +++ +W A IS + G A++ F +RR G +P+ T+ L +
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI 421
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
++H ++++ ++ + SV L+D + K + A VF+ I K+ ++W +ML
Sbjct: 422 ----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAG 477
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC-ARIAGLELGRSVHAVAVKACVEG 245
Y Q E E ++F REG++P +F S+++AC A A +E G+ HA A+K +
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNN 537
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V S+LV +Y K G+I+ A F + ER+LV WN++I GYA G A AL FEEM
Sbjct: 538 ALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQ 597
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
E + +T + V+SAC+ AG V KG F M + I P EHY+C++DL RAG
Sbjct: 598 KRNLEV--DAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAG 655
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ +A +II MP P +VW +L A RV+ ELG++AA+ + L+P S +VLLSN
Sbjct: 656 MLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSN 715
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++AA G W E VRK M +KK G SWI VKN+ + F A D SH + I + L++
Sbjct: 716 IYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSE 775
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L ++ GY PDTN+ +D+E+E+K T + HHSE++A+AFGLIA P +P++I KNLR+
Sbjct: 776 LNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRV 835
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCHS K +S + R ++VRD+NRFH F G CSC DYW
Sbjct: 836 CGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 205/404 (50%), Gaps = 14/404 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ +T + A + G Q+HAL +K G + V S M SK+G+
Sbjct: 194 MQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGM 253
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +FD M ++ +WN+ I+ V+ G+ A + F N++ G +P TF + + +
Sbjct: 254 LRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKS 313
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD---GIIDKND 177
C+ L L R LH ++SG N +V L+ KC E+ A +F G+ ++
Sbjct: 314 CASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGV--QSV 371
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ Y+QN + + +F RREGV+P F S++L+ + E +HA
Sbjct: 372 VSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAE 427
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K E + VG+AL+D + K G+I DA F + ++++ W+A++ GYA G + A
Sbjct: 428 VIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEA 487
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA-VEKGMKIFYSMTLKYGIKPGAEHYAC 356
F ++T R PN T +++AC+ A VE+G K F++ +K + +
Sbjct: 488 AKIFHQLT--REGIKPNEFTFCSIINACTAPTASVEQG-KQFHAYAIKLRLNNALCVSSS 544
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+V L + G ++ A+EI K R +S W ++++ +G+ +
Sbjct: 545 LVTLYAKRGNIESAHEIFKRQKERDLVS-WNSMISGYAQHGQAK 587
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 194/402 (48%), Gaps = 11/402 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ R +SP+ +T C+ + G+Q+H +K G +H + VG S DMY+KTG
Sbjct: 93 LYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN 152
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++FDEM +R++ +WN+ ++ + F ++ G PD T + A
Sbjct: 153 VRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAA 212
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ + +G Q+H +V+ GF+ VCN L+ K + A+VVFD + +K+ VSW
Sbjct: 213 LANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSW 272
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ +V N ++ + F + G +P +SV+ +CA + L L R +H +K
Sbjct: 273 NSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLK 332
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ + N V +AL+ KC I DA F+ M +++V W A+I GY G D A++
Sbjct: 333 SGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVN 392
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F + MR E V PN+ T +L+ E ++ +K + + ++
Sbjct: 393 LF---SLMRREGVKPNHFTYSTILTVQHAVFISE-----IHAEVIKTNYEKSSSVGTALL 444
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
D + G + A ++ + + + I+ W A+L G+ E
Sbjct: 445 DAFVKIGNISDAVKVFELIETKDVIA-WSAMLAGYAQAGETE 485
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 191/409 (46%), Gaps = 22/409 (5%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----AD 65
+ T L S+ + + QLH A Q H V + ++T L+D A
Sbjct: 4 NMTLRALTNTSTNPILRIRRYQLHCHANPLLQSHVVALN-------ARTLLRDSDPRFAQ 56
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD+ P R+L N + + + A+ F++L R+G PD T L+ C+
Sbjct: 57 QLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSF 116
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+G Q+H V+ G ++SV N LVD Y K V + VFD + D++ VSW S+L
Sbjct: 117 NGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLT 176
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y N + ++F + EG P + +S+V++A A + +G +HA+ VK E
Sbjct: 177 GYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFET 236
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
V ++L+ M K G ++DA + F+ M ++ V WN++I G+ G L +FE
Sbjct: 237 ERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQ---DLEAFETFN 293
Query: 306 SMRCE-AVPNYVTLVCVLSACSRAGAVEKGM-KIFYSMTLKYGIKPGAEHYACVVDLLGR 363
+M+ A P + T V+ +C A E G+ ++ + TLK G+ ++ L +
Sbjct: 294 NMQLAGAKPTHATFASVIKSC--ASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+D A+ + M ++ W A+++ G + A NLF L
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD----QAVNLFSL 396
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 325/546 (59%), Gaps = 11/546 (2%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ DV + + G D+A +FDEM ERN+ TW I+ G R N +D
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMIT----GYRQNNRVDVARK 224
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
L E +++ + L + ++ + + V CN ++ +G+ E
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP----VIACNAMIVGFGEVGE 280
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ A+ VFD + D+++ +W M+ Y + E +F +++GV P + S+LS
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA +A L+ GR VHA V+ + +++V S L+ MY KCG + A++ F++ ++++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N+II GYA G + AL F EM S +PN VTL+ +L+ACS AG +E+G++IF SM
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPS--SGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
K+ + P EHY+C VD+LGRAG VD+A E+I+ M ++P +VWGALL AC+ + + +L
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDL 518
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
+AA LF+ +P+++G +VLLS++ A+ +W + +VRK M+ + K GCSWI V
Sbjct: 519 AEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGK 578
Query: 462 RIHIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
++H+F + +H I ML K ++ AGY PD + L+DV+EEEK+ + HSE
Sbjct: 579 KVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSE 638
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
++A+A+GL+ +P GVPIR+ KNLR+CGDCH+A K IS + RE+I+RD NRFH F +G C
Sbjct: 639 RLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGEC 698
Query: 581 SCSDYW 586
SC DYW
Sbjct: 699 SCRDYW 704
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 140/360 (38%), Gaps = 62/360 (17%)
Query: 35 LALKSGQIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPK 93
L L+ + V CS S+ G ++A K FD + + + +WN+ +S G PK
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
A F + E +++++ ++ ++ R + + + NV +V
Sbjct: 66 EARQLFDEM----SERNVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAMV 117
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
Y + VG A+ +F + ++N+VSW M + + + +++ D
Sbjct: 118 KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY-----------DM 166
Query: 214 M-ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
M + V+++ I GL C EG + +A + F++
Sbjct: 167 MPVKDVVASTNMIGGL-------------CREGR----------------VDEARLIFDE 197
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M ERN+V W +I GY D+A FE M V+ +L + +G +E
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE------KTEVSWTSMLLGYTLSGRIE 251
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ F M + KP A +V G G + +A + M R + W ++ A
Sbjct: 252 DAEEFFEVMPM----KPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDN-ATWRGMIKA 305
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+++ + P+ + + + L G+Q+HA ++ DV+V MY K G
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD +++ WN+ IS G + A+ F + +G P+ +T A L A
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 121 CSDCSLLQLGRQLHGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CS L+ G ++ + S F V + VD G+ +V A + + + K D
Sbjct: 442 CSYAGKLEEGLEIFESM-ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 179 S-WCSML 184
+ W ++L
Sbjct: 501 TVWGALL 507
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
GK NE A+ FD + K SW S++ Y N + Q+F V + ++S
Sbjct: 31 GKINE---ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+ + R+V + E N+ +A+V Y + G + +AE F +MPER
Sbjct: 88 GYIKNRMIVEA----RNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
N V W + GG G D A ++ M A N + +C R G V++
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLC------REGRVDEARL 193
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
IF M + + + ++ + VD A ++ + MP + +S W ++L +
Sbjct: 194 IFDEMRERNVVT-----WTTMITGYRQNNRVDVARKLFEVMPEKTEVS-WTSMLLGYTLS 247
Query: 397 GKPELGRIAADNLFKLDP 414
G+ E A+ F++ P
Sbjct: 248 GRIE----DAEEFFEVMP 261
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/558 (39%), Positives = 320/558 (57%), Gaps = 2/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G Q+ LA+K G V + ++SK G + A +F E+ +++L + NA IS
Sbjct: 50 GMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTC 109
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G ++++ F L +G T + S L +HGF V+ G + SV
Sbjct: 110 NGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSV 169
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L Y + NE+ A+ +FD +K SW +M+ QN + +F T ++ V
Sbjct: 170 STALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNV 229
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++S+LSACA+I L LG VH++ E N++V +AL+DMY KCGSI A
Sbjct: 230 NPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARE 289
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MPE+N V WNA+I GY GH AL F +M S + P +T + VL ACS A
Sbjct: 290 LFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVK--PTGLTFLSVLYACSHA 347
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G IF++M +G +P AEHYAC+VD+LGRAG + +A E IK MP+ P VWGA
Sbjct: 348 GLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGA 407
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL AC ++ L +A++ LF+LDP + G +VL+SN+++ ++ +A VR+ K +
Sbjct: 408 LLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRL 467
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K GC+ I + H+F + D SH ++ I A L KL +M AG+ +T L+D+EE
Sbjct: 468 AKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEE 527
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK + HSEK+A+AFGLI+ PG IRI KNLR+C DCH+ KF+S I R ++VRD
Sbjct: 528 EEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRD 587
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F DG CSC DYW
Sbjct: 588 ANRFHHFKDGLCSCGDYW 605
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G DL T A L A ++ L+LG Q+ ++ GF +VS+ GL+ + KC EV +A
Sbjct: 26 GPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIA 85
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+++F I K+ +S +M+ + N E E+ ++F G I ++ +
Sbjct: 86 RLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPF 145
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L +H VK + + V +AL +Y + + A F++ E+ L WNA+I
Sbjct: 146 GHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMI 205
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
G G D A+S F+ M + PN VT+ +LSAC++ GA+ G + +S+
Sbjct: 206 SGCTQNGLTDAAISLFQTM--QKNNVNPNPVTVTSILSACAQIGALSLGEWV-HSLIKSN 262
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++D+ + G + A E+ MP + ++ W A+++ ++G
Sbjct: 263 RFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVT-WNAMISGYGLHG 313
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
M++ ++PN T + A + + G+ +H+L +KS + +V+V + DMY+K G
Sbjct: 224 MQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSL-IKSNRFESNVYVSTALIDMYAKCG 282
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++FD MPE+N TWNA IS L G + A+ F ++ + +P +TF + L
Sbjct: 283 SITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLY 342
Query: 120 ACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEV 162
ACS L++ G + +V GF+ +VD G+ ++
Sbjct: 343 ACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQL 386
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 307/536 (57%), Gaps = 5/536 (0%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLI 112
MY+K G D+A +F+ + ER + +W+A I L GR + A+ F +R G EP+ +
Sbjct: 29 MYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAM 88
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSG--FDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
TF NAC L+ GR++H + SG N + N L++ Y +C + A+ VFD
Sbjct: 89 TFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFD 148
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ + SW SM+ +N E ++F EG+ P ++SVL+ACA L++
Sbjct: 149 TMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKV 208
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G+ +H+ + ++ +AL+DMY KCGS++ + F M RN V W A+I A
Sbjct: 209 GKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQ 268
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G D AL F+EM V + T +CVL ACS AG +++ ++ F+SM Y I P
Sbjct: 269 HGQGDEALELFKEMNLE--GMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPT 326
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
HY +D +GRAG + A E+I MP P W LLNACR++ + E A+ L
Sbjct: 327 ETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLS 386
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
KL P DS + LL N++AATGR+ + VRK M D G+KK G S+I VKN++H F A D
Sbjct: 387 KLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGD 446
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
+H EI L KL M+ AGY+P+T L+ V EEEK +G HSEK+A+AFGLIA
Sbjct: 447 RAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIA 506
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PPG P+ I KNLR+C DCH+A K I+ I+ R ++VRD +RFH F DG CSC DYW
Sbjct: 507 TPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 151/338 (44%), Gaps = 9/338 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDD 63
+ PN TF +F A + G+++HALA+ SG++ + + + +MY + G ++
Sbjct: 83 VEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEE 142
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FD M + +W + I+ A++ F + G P +T + LNAC+
Sbjct: 143 ARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACAC 202
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L++G+Q+H L SGF +V L+D Y KC + + VF + +N VSW +M
Sbjct: 203 SGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAM 262
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAVAVKA 241
+ Q+ + + ++F EG+ VL AC+ AGL E H++
Sbjct: 263 IAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH-AGLIKESLEFFHSMVEDY 321
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSS 300
+ +D G+ G +QDAE + MP + W ++ A+ A
Sbjct: 322 AIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKV 381
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAG---AVEKGM 335
E ++ + E Y L V +A R G V KGM
Sbjct: 382 AELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 9/276 (3%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
++ GR++H L GF NGLV Y KC + A+ +F+GI+++ VSW +M+
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 187 YVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKA--CV 243
Y + + +F R +G VEP + V +AC I LE GR +HA+A+ +
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N + +AL++MY +CGS+++A F+ M + W ++I AL F
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180
Query: 304 MTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M E + P VTL VL+AC+ +GA++ G +I +S G ++D+
Sbjct: 181 MN---LEGIPPTSVTLASVLNACACSGALKVGKQI-HSRLDASGFHSSVLAQTALLDMYA 236
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G ++ + ++ M R ++S W A++ A +G+
Sbjct: 237 KCGSLECSSKVFTAMETRNSVS-WTAMIAALAQHGQ 271
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P T + A + GKQ+H+ SG V + DMY+K G
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGS 240
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + K+F M RN +W A I+ G+ A++ F + G D TF L A
Sbjct: 241 LECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300
Query: 121 CSDCSLLQ 128
CS L++
Sbjct: 301 CSHAGLIK 308
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/579 (37%), Positives = 327/579 (56%), Gaps = 6/579 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN TF A + L + + A +G HDVFV + +YS+ G ++A ++
Sbjct: 105 PNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRV 164
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP ++ W+ ++ V GRP A+ + +R G D + + AC
Sbjct: 165 FDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNA 224
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG L+R +V LV Y K + +A VF + +NDV+W +++ +
Sbjct: 225 RIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGF 284
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN +F + +G++P + + S L ACA + L+LG+S+H ++ +E
Sbjct: 285 AQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQC 343
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+A++DMY KCGS++ A FNK+ R+LV WNAII G AL+ F+E+
Sbjct: 344 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNET 403
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P++ T +LSA S +G VE+G F M ++GI+P +HY C+VDLL R+GLV
Sbjct: 404 GIK--PDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLV 461
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A +++ M PTI++W LL+ C K ELG A + +L P D G L+SN++
Sbjct: 462 EEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLY 521
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA +W++ +RK MKD G KK G S I VK H F +D SH ++ EI M+ KL
Sbjct: 522 AAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLN 581
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EM+ GY+P T F +D++E++ ++ +HSE++A+AFGL+ PG + I KNLR+CG
Sbjct: 582 SEMRKLGYVPRTEFVYHDLDEDQLLS---YHSERLAIAFGLLNTSPGTRLVIIKNLRVCG 638
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K+IS IV RE++VRD RFH F DG CSC DYW
Sbjct: 639 DCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 10/321 (3%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN +S G P A+ F L + P+ TF L AC+ L +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALP-SSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+G+ +V VC+ L+ Y +C + A VFDG+ K+ V+W +M+ +V
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
M+ R GV + ++ V+ AC +G SVH ++ C+ ++ ++LV MY
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
K G + A F MP RN V W+A+I G+A G A AL F E+ + + P L
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQ--PCSWAL 312
Query: 319 VCVLSACSRAGAVEKGMKI--FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
V L AC+ G ++ G I F L++ G V+D+ + G ++ A ++ +
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRRLEWQCILG----TAVLDMYSKCGSLESARKLFNK 368
Query: 377 MPMRPTISVWGALLNACRVYG 397
+ R + +W A++ C +G
Sbjct: 369 LSSRDLV-LWNAIIACCGTHG 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 12/333 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S ++ + +A + G +H L+ DV S MY+K G
Sbjct: 199 MREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGH 258
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F MP RN TW+A IS GR A+D F L+ G +P + L A
Sbjct: 259 LDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLA 318
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LG+ +HGF++R + + ++D Y KC + A+ +F+ + ++ V W
Sbjct: 319 CASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLW 377
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-----RSVH 235
+++ + + +F G++P +S+LSA + +E G R +
Sbjct: 378 NAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIK 437
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHA 294
++ + + +VD+ + G +++A M E + W ++ G +
Sbjct: 438 EFGIEPAEKHYV----CIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
++ + +++ +R E + + LV L A ++
Sbjct: 494 ELGETIAKKILELRPEDI-GVLALVSNLYAAAK 525
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/586 (37%), Positives = 332/586 (56%), Gaps = 3/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ FTFP + KA + L +H +K G DVFV +Y+K G
Sbjct: 145 MRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD + R + +W + IS G+ A+ F +R G +PD I + L A
Sbjct: 205 IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRA 264
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+D L+ GR +HGF+++ G + ++ L FY KC V +AK FD + N + W
Sbjct: 265 YTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMW 324
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y +N E +F ++P + S + A A++ LEL + + K
Sbjct: 325 NAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSK 384
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +IFV ++L+DMY KCGS++ A F++ ++++V W+A+I GY G A++
Sbjct: 385 SNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINL 444
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+ M + PN VT + +L+AC+ +G V++G ++F+ M + I P EHY+CVVDL
Sbjct: 445 YHVMK--QAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFEIVPRNEHYSCVVDL 501
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A I ++P+ P +SVWGALL+AC++Y LG AA+ LF LDP ++G++
Sbjct: 502 LGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHY 561
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++A++ W+ VR M++ G+ K G S I + ++ F D SH EI
Sbjct: 562 VQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIF 621
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L +K G++P T L+D+ EEK + HSE+IA+A+GLI+ PG +RIT
Sbjct: 622 DELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRIT 681
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR C +CHSA K IS +V RE+IVRD NRFH F DG CSC DYW
Sbjct: 682 KNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 12/397 (3%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
C + + F + ++ H+ Q+H + SG H+ F+ + S G
Sbjct: 51 HCFNSDSFYASLIDNSTHKRHL----DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICY 106
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FDE ++ WNA I + ++ ++ + +R TG PD TF L AC++
Sbjct: 107 ARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE 166
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L +HG +++ GF +V V NGLV Y KC +G+AKVVFDG+ + VSW S+
Sbjct: 167 LLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSI 226
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y QN + +MF R GV+P + S+L A + LE GRS+H +K +
Sbjct: 227 ISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGL 286
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E + +L Y KCG + A+ F++M N++ WNA+I GYA GHA+ A++ F
Sbjct: 287 EDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHY 346
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVE--KGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M S + P+ VT+ + A ++ G++E + M + S + YG ++D+
Sbjct: 347 MISRNIK--PDSVTVRSAVLASAQVGSLELAQWMDDYVSKS-NYGSDIFVN--TSLIDMY 401
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G V+ A + + + +W A++ ++G+
Sbjct: 402 AKCGSVEFARRVFDRNSDKDVV-MWSAMIMGYGLHGQ 437
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/542 (39%), Positives = 315/542 (58%), Gaps = 7/542 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR 104
+F+ +MY K L +DA ++FD+MP+RN+ +W IS + A++ + + R
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
P++ T+ + L +C+ S + R LH +++ G + +V V + L+D + K E
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A VFD ++ + + W S++ + QN + ++F +R G + ++SVL AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+A LELG H VK + ++ + +ALVDMY KCGS++DA FN+M ER+++ W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G A G++ AL FE M S + PNY+T+V VL ACS AG +E G F SM
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTK--PNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
YGI P EHY C++DLLG+AG +D A +++ EM P W LL ACRV L
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 448
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA + LDP D+G + LLSN++A + +W+ + +R M+D GIKK GCSWI V +IH
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F D SH + E+ L +L + GY+P+TNF L D+E E+ + HHSEK+AL
Sbjct: 509 AFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 568
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
AFGL+ +P IRI KNLRICGDCH K S + R +++RD R+H F DG CSC D
Sbjct: 569 AFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGD 628
Query: 585 YW 586
YW
Sbjct: 629 YW 630
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 163/338 (48%), Gaps = 13/338 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + PN +T+ + ++ + + + LH +K G DVFV + D+++K G
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FDEM + WN+ I R A++ F ++R G + T + L A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +LL+LG Q H +V+ +D ++ + N LVD Y KC + A VF+ + +++ ++W
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG----RSVHA 236
+M+ QN + ++F + G +P I VL AC+ LE G RS+
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ V + ++D+ GK G + DA N+M E + V W ++G Q +
Sbjct: 388 LYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV 444
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+A + +++ ++ E Y L + + + +VE+
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 9/297 (3%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ A +L+ G D T+ + C + G + L +G + + N L++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y K N + A +FD + +N +SW +M+ Y + + ++ + R+ V P +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SSVL +C G+ R +H +K +E ++FV SAL+D++ K G +DA F++M
Sbjct: 165 YSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ + WN+IIGG+A +D+AL F+ M R + TL VL AC+ +E G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMK--RAGFIAEQATLTSVLRACTGLALLELG 279
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
M+ + +KY + +VD+ + G ++ A + +M R I+ W +++
Sbjct: 280 MQAHVHI-VKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKERDVIT-WSTMIS 332
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/533 (41%), Positives = 320/533 (60%), Gaps = 15/533 (2%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP------DLITFCAF 117
A ++FD MP+R+ W+A +S G+P+ A+ + RR EP + T +
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALY---RRMQEEPGNDGADNEFTASSA 170
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFD---GNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L A + + GR+LH +VR G D G+ + + L D Y KC V A+ VFD +
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ VSW +M+ Y G ++FL R GV P +F + VL ACA+ A GR
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH K+ + F SAL+ MY KCG + A F M + +LV W A+I GYA G
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ AL F+ +R P++VT V VLSAC+ AG V+KG++IF+S+ +Y I+ A+H
Sbjct: 351 PEEALRYFDMF--LRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADH 408
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YACV+DLL R+G +RA ++I M ++P +W +LL CR++ L R AA+ LF+++
Sbjct: 409 YACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIE 468
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + +V L+N++A+ G ++E + VR+ M+ GI K SWI V R+H+F D SH
Sbjct: 469 PENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSH 528
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ EI A+L KL +M GY+ D F L+DVE+E+K ++G+HSE++A+AFG+IA P
Sbjct: 529 PKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPE 588
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PI++ KNLRICGDCH+A K IS IV R++IVRD+NRFH F DG CSC DYW
Sbjct: 589 GSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 6/338 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDAD 65
N+FT A++A G++LH ++ G D + + DMY+K G DDA
Sbjct: 163 NEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDAR 222
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
++FD MP R+ +W A + GGR F+++ RT G P+ T+ L AC+
Sbjct: 223 RVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQF 282
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++ GRQ+HG + +SG + + L+ Y KC ++G A VF+ + + VSW +++
Sbjct: 283 AVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVI 342
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACV 243
Y QN + E + F R G++P VLSACA ++ G + H++ + C+
Sbjct: 343 SGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCI 402
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFE 302
E + ++D+ + G + AE M + N W +++GG + +A + E
Sbjct: 403 EHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAE 462
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
+ + E YVTL + ++ VE +I S
Sbjct: 463 ALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R + PN+FT+ + +A + + G+Q+H KSG F + MYSK G
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+ M + +L +W A IS G+P+ A+ F R+G +PD +TF L+A
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
C+ L+ G ++ H + + ++D + + A K++ + + N
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKF 439
Query: 179 SWCSML 184
W S+L
Sbjct: 440 LWASLL 445
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 337/589 (57%), Gaps = 9/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++ +F + K + L +QLH +K G + D + + YSK
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 61 KDDADKMFDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA ++F E+ N+ +W A IS + + A+D F ++R G P+ T+ L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A S ++H +V++ ++ + +V L+D Y K +V A VF GI DK+ V+
Sbjct: 406 ALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVA 238
W +ML Y Q E E +MF + G++P +F SS+L+ CA A + G+ H A
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K+ ++ ++ V SAL+ MY K G+I+ AE F + E++LV WN++I GYA G A AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM + + + VT + V +AC+ AG VE+G K F M I P EH +C+V
Sbjct: 582 DVFKEMKKRKVKM--DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DL RAG +++A ++I+ MP ++W +L ACRV+ K ELGR+AA+ + + P DS
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSNM+A +G W+E VRK M + +KK G SWI VKN+ + F A D SH +
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L L +K GY PDT++ L D+++E K + HSE++A+AFGLIA P G P+
Sbjct: 760 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 819
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF-WDGYCSCSDYW 586
I KNLR+CGDCH K I+ I RE++VRD+NRFH F DG CSC D+W
Sbjct: 820 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 193/399 (48%), Gaps = 8/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN FTF + + G Q+H + +K+G + V S ++Y K G
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD+ +++ TWN+ IS G A+ F ++R +F + +
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVS 179
C++ L+ QLH +V+ GF + ++ L+ Y KC + A +F I N VS
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ ++QN +E +F +R+GV P +F S +L+A I+ E VHA V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVV 420
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E + VG+AL+D Y K G +++A F+ + ++++V W+A++ GYA G + A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F E+T + PN T +L+ C+ A K F+ +K + + ++
Sbjct: 481 MFGELTKGGIK--PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ + G ++ A E+ K + +S W ++++ +G+
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVS-WNSMISGYAQHGQ 576
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 177/389 (45%), Gaps = 9/389 (2%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F + K S+ L + G+QLH +K G + DV VG S D Y K D K+FDEM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
ERN+ TW IS + F+ ++ G +P+ TF A L ++ + G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H +V++G D + V N L++ Y KC V A+++FD K+ V+W SM+ Y N
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ MF + R V + +SV+ CA + L +H VK + + +A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 253 LVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
L+ Y KC ++ DA F ++ N+V W A+I G+ + A+ F EM R
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK--RKGV 393
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PN T +L+A E ++ +K + + ++D + G V+ A
Sbjct: 394 RPNEFTYSVILTALPVISPSE-----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + + ++ W A+L G+ E
Sbjct: 449 KVFSGIDDKDIVA-WSAMLAGYAQTGETE 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 7/256 (2%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+A +FD+ P R+ ++ + + GR + A F+N+ R G E D F + L +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
GRQLH ++ GF +VSV LVD Y K + + VFD + ++N V+W +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ Y +N + +F+ + EG +P F ++ L A G VH V VK
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ I V ++L+++Y KCG+++ A I F+K +++V WN++I GYA G AL F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF- 283
Query: 303 EMTSMRCEAVPNYVTL 318
SMR NYV L
Sbjct: 284 --YSMRL----NYVRL 293
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 317/580 (54%), Gaps = 35/580 (6%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ +TFPC+ KA S L G Q+H +K G ++F+G + MY K G +A K
Sbjct: 134 NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ D+MP R++ +WN+ ++ G+ +A L C +
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDA----------------------LEICKEMDS 231
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L L D V Y V +F+ + KN +SW M+ +
Sbjct: 232 LNLNH-----------DAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAI 280
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YV N +FL G++P I+S+L AC ++ L LGR +H K + N
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPN 340
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMY KCG +++A F+KM R++V W +++ Y G A++ F +M
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM-- 398
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+ + V VLSACS G +++G F MT +YGI P EH+AC+VDL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
V+ AY IK+MPM P VWGALL+ACRV+ K ++G +AAD LF+L P SG +VLLSN+
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A G W++ VR MK +GIKK G S + + ++H F A D H + I L L
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVL 578
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+MK GYIP T AL+DVE E+K + HSEK+A+ F ++ G PIRITKNLR+C
Sbjct: 579 VGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVC 638
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GDCH A K IS IV R +IVRD NRFH F +G CSC DYW
Sbjct: 639 GDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 151/348 (43%), Gaps = 40/348 (11%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
YS G A +FD E+N+ +N I + V A+ F + PD TF
Sbjct: 81 YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L ACS L++G Q+H +V+ G D N+ + N LV YGKC + A+ V D +
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ VSW SM+ Y Q+ + ++ L C + L L
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDA----------------------LEICKEMDSLNLNHDA 238
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+A + V Y ++Q F +M ++NL+ WN +I Y +
Sbjct: 239 GTMA-----------SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+S F +M C P+ VT+ +L AC A+ G ++ + K ++P
Sbjct: 288 NEAVSLFLQME--ECGMKPDAVTIASLLPACGDLSALFLGRRL-HKYIEKGNLRPNLLLE 344
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
++D+ + G ++ A ++ +M +R +S W ++++A YG+ G
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMMSA---YGRSGQG 388
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 11/298 (3%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L+ Y E +A+ +FD ++KN V + M+ YV N +F P
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ VL AC+ + L +G VH VK ++ N+F+G+ALV MYGKCG +++A +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+MP R++V WN+++ GYA G D AL +EM S+ + + + + V
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGA 388
+ +F MT K I + ++ + + + A + +M M+P +
Sbjct: 257 QYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIAS 311
Query: 389 LLNACRVYGKPELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
LL AC LGR + K L PN + LL +M+A G EEA V +M+
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALL-DMYAKCGCLEEARDVFDKMR 368
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 4 EC-ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
EC + P+ T L A L G++LH K ++ + + DMY+K G +
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLE 358
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+A +FD+M R++ +W + +S G+ +A+ F + +G PD I F + L+ACS
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACS 418
Query: 123 DCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSW 180
LL GR + G + +VD +G+ EV A + ++ N+ W
Sbjct: 419 HTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVW 478
Query: 181 CSML 184
++L
Sbjct: 479 GALL 482
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 339/585 (57%), Gaps = 7/585 (1%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + P+ TF A S + G+++ A + SG D V + +MYSK G +
Sbjct: 157 EGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FD + R++ WN IS G A++ F + +P+++TF L AC++
Sbjct: 217 ARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE-VGLAKVVFDGIIDKNDVSWCS 182
L+ GR +H + G++ ++ + N L++ Y KC+ + A+ VF+ + ++ ++W
Sbjct: 277 LEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNI 336
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++V YVQ + ++ +F + E V P + +S+VLSACA + G++VHA+
Sbjct: 337 LIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGR 396
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++ + ++L++MY +CGS+ D F + +++LV W+ +I YA GH+ L F
Sbjct: 397 CKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFW 456
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
E+ A + VT+V LSACS G +++G++ F SM +G+ P H+ C+VDLL
Sbjct: 457 ELLQEGLAA--DDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLS 514
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV- 421
RAG ++ A +I +MP P W +LL+ C+++ + AD LF+L+ D + V
Sbjct: 515 RAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVT 574
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN++A GRW++ VRK +K GCS+I + + +H F A D SH I A
Sbjct: 575 LLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ +L ++MK AGY+PD L++V+EEEK + +HSEK+A+A+GLI+ PPG P+ I K
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR C DCH+A KFIS IVGR+++VRD+ RFH F +G CSC DYW
Sbjct: 692 NLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 198/408 (48%), Gaps = 11/408 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
M E + P+ F S+ G+ LHA+ L++ + D+ +G + MY++
Sbjct: 49 MVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCR 108
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF---INLRRTGGEPDLITFCA 116
+ A K FDEM ++ L TWNA I+ G + A+ + ++ G +PD ITF +
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L ACS + GR++ V SG+ + V N L++ Y KC + A+ VFD + +++
Sbjct: 169 ALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
++W +M+ Y + ++F +P +L+AC + LE GR++H
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHR 288
Query: 237 VAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ E ++ +G+ L++MY KC S+++A F ++ R+++ WN +I Y G A
Sbjct: 289 KVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAK 348
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F++ M+ E V PN +TL VLSAC+ GA +G K +++ K
Sbjct: 349 DALDIFKQ---MQLENVAPNEITLSNVLSACAVLGAKRQG-KAVHALIASGRCKADVVLE 404
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
++++ R G +D + + + +S W L+ A +G G
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 188/383 (49%), Gaps = 15/383 (3%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY K G DA +F + N +W ++ G + A+ + + G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
F + CS L+ G+ LH ++ + + ++ + L+ Y +C ++ LA+ FD +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMF---LTARREGVEPKDFMISSVLSACARIAGLE 229
K V+W +++ Y +N + +++ ++ EG++P SS L AC+ + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
GR + A V + + V +AL++MY KCGS++ A F+++ R+++ WN +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
QG A AL F+ M + PN VT + +L+AC+ +E+G I + ++G +
Sbjct: 241 KQGAATQALELFQRMGPN--DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK-EHGYES 297
Query: 350 GAEHYACVVDLLGR-AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
++++ + + ++ A ++ + + R I+ W L+ A YG+ + A +
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVIT-WNILIVAYVQYGQAK----DALD 352
Query: 409 LFKLDP--NDSGNHVLLSNMFAA 429
+FK N + N + LSN+ +A
Sbjct: 353 IFKQMQLENVAPNEITLSNVLSA 375
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E ++PN+ T + A + L GK +HAL DV + S +MY++ G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD +F + +++L +W+ I+ G + ++ F L + G D +T + L+A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVS-----VCNGLVDFYGKCNEVGLAK-VVFDGIID 174
CS +L+ G Q FL G G +C +VD + + A+ ++ D
Sbjct: 477 CSHGGMLKEGVQ--SFLSMVGDHGLAPDYRHFLC--MVDLLSRAGRLEAAENLIHDMPFL 532
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISS 217
+ V+W S+L +GC++ +R V K F + S
Sbjct: 533 PDAVAWTSLL----------SGCKLHNDTKRAARVADKLFELES 566
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/623 (37%), Positives = 344/623 (55%), Gaps = 69/623 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN FT+ + + S + GKQ+HA A+K+ + FV DMY+K
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188
Query: 61 KDDADKMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+A+ +F+ P+ RN W A ++ G AI+ F ++R G E + TF + L
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC S G Q+HG +VRSGF NV V + LVD Y KC ++ A+ + + + + VS
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS 308
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+V V+ E +F ++ +F S+
Sbjct: 309 WNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL--------------------- 347
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
V +ALVDMY K G A F KM +++++ W +++ G H G + AL
Sbjct: 348 ---------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALR 398
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSAC--------SRAGAVEKGMKIFYSMTLK------- 344
F EM M P+ + + VLSA ++ G +E K+F SM ++
Sbjct: 399 LFCEMRIMGIH--PDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTA 456
Query: 345 ---------------------YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
YGIKPG EHYAC++DLLGR+G + A E++ +M ++P
Sbjct: 457 LIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDA 516
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+VW ALL ACRV+G ELG AA+NLF+L+P ++ +VLLSN+++A G+WEEA R+ M
Sbjct: 517 TVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLM 576
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K G+ K GCSWI + +++H F ++D SH R EI + + ++ +K AGY+PD NFAL
Sbjct: 577 KLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFAL 636
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EE K + +HSEK+A+AFGL+ +PPG PIRI KNLRICGDCH+A K++SG+ R
Sbjct: 637 HDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 696
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
VI+RD+N FH F +G CSCSDYW
Sbjct: 697 VILRDSNCFHHFREGACSCSDYW 719
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 58/438 (13%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ +G ++A K+F E P R+ TW++ IS G A++ F ++ G P+ T+
Sbjct: 82 YANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTW 141
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L CS LL+ G+Q+H +++ FD N V GLVD Y KC + A+ +F+ D
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201
Query: 175 K-NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
K N V W +M+ Y QN + + F R EG+E F S+L+AC I+ G
Sbjct: 202 KRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQ 261
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG------ 287
VH V++ N+FVGSALVDMY KCG + +A M + V WN++I G
Sbjct: 262 VHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGL 321
Query: 288 ----------------------------------YAHQGHADMALSSFEEMTSMRCEAVP 313
YA +G+ D A FE+MT
Sbjct: 322 GEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTD------K 375
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV--------VDLLGRAG 365
+ ++ +++ C G+ E+ +++F M + GI P A V V + + G
Sbjct: 376 DVISWTSLVTGCVHNGSYEEALRLFCEMRI-MGIHPDQIVIAAVLSALDNSLVSMYAKCG 434
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ A ++ M ++ I+ W AL+ G+ + + ++ + P ++ + +
Sbjct: 435 CIEDANKVFDSMEIQDVIT-WTALIVGYAQNGRGRDYFQSMEEVYGIKPGPE-HYACMID 492
Query: 426 MFAATGRWEEADLVRKEM 443
+ +G+ EA + +M
Sbjct: 493 LLGRSGKLMEAKELLNQM 510
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 163/380 (42%), Gaps = 53/380 (13%)
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +L + F+ G + S N ++ KC V A+ +FD + D+++ SW
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 181 CSMLVVYVQN----------YEE----------------ENGC-----QMFLTARREGVE 209
+M+ Y + YE GC ++F + EG
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F SVL C+ LE G+ +HA A+K + N FV + LVDMY KC I +AE
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 270 FNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSR 327
F P+ RN V W A++ GY+ G A+ F + MR E + N T +L+AC
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRD---MRGEGIECNQFTFPSILTACGS 252
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A G ++ + ++ G + +VD+ + G + A +++ M + +S W
Sbjct: 253 ISACGFGAQV-HGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS-WN 310
Query: 388 ALLNACRVYGKPE----LGRIAADNLFKLD----PNDSGNHVLLSNMFAATGRWEEADLV 439
+++ C G E L RI K+D P+ N L +M+A G ++ A V
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNN--ALVDMYAKRGYFDYAFDV 368
Query: 440 RKEMKDVGIKKGAGCSWISV 459
++M D + SW S+
Sbjct: 369 FEKMTDKDV-----ISWTSL 383
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/614 (38%), Positives = 324/614 (52%), Gaps = 74/614 (12%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P ++ +F+ + L++ G Q+HA L G VG Y+ +G D + +
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ G D TF L + + +
Sbjct: 128 FN-------------------------------------GIGDYFTFPFVLKSSVELLSV 150
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD----------------- 170
+G+ +HG ++R G ++ V L+ YGKC E+ A VFD
Sbjct: 151 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 210
Query: 171 ---GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFM 214
G ID +N VSW +M+ Y Q+ + +F + GV P
Sbjct: 211 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 270
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
I SVL ACA+++ LE GR +H +A + + N V AL MY KCGS+ DA F+K+
Sbjct: 271 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 330
Query: 275 --ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
E+NL+ WN +I YA GH A+S+F EM + P+ +T +LS CS +G V+
Sbjct: 331 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ--PDDITFTGLLSGCSHSGLVD 388
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G+K F M+ Y I P EHYACV DLLGRAG + A +++ EMPM S+WG+LL A
Sbjct: 389 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CR + E+ AA LF L+P ++GN+VLLSNM+A GRW+E D +R +K G KK
Sbjct: 449 CRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSP 508
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
GCSWI + + H+F DTSH + EI L L E+MKAAGY PDT++ L+D+ EEEK
Sbjct: 509 GCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKE 568
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
+ HSEK+A+AFG++ P +R+TKNLRICGDCH+A FIS I GREVIVRD NRF
Sbjct: 569 FNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRF 628
Query: 573 HRFWDGYCSCSDYW 586
H F G CSC DYW
Sbjct: 629 HHFKGGCCSCGDYW 642
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T + A + L G+Q+H LA + G + V + MY+K G DA
Sbjct: 264 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 323
Query: 66 KMFDEM--PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
FD++ E+NL WN I+ G A+ F + + G +PD ITF L+ CS
Sbjct: 324 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 383
Query: 124 CSLLQLG 130
L+ +G
Sbjct: 384 SGLVDVG 390
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 339/585 (57%), Gaps = 7/585 (1%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + P+ TF A + + G+++ A + SG D V + +MYSK G +
Sbjct: 157 EGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FD + R++ WN IS G A++ F + +P+++TF L AC++
Sbjct: 217 ARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTN 276
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE-VGLAKVVFDGIIDKNDVSWCS 182
L+ GR +H + G++ ++ + N L++ Y KC+ + A+ VF+ + ++ ++W
Sbjct: 277 LEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNI 336
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++V YVQ + ++ +F + E V P + +S+VLSACA + G++VHA+
Sbjct: 337 LIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGR 396
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ ++ + ++L++MY +CGS+ D F + +++LV W+ +I YA GH+ L F
Sbjct: 397 CKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFW 456
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
E+ A + VT+V LSACS G +++G++ F SM +G+ P H+ C+VDLL
Sbjct: 457 ELLQEGLAA--DDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLS 514
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV- 421
RAG ++ A +I +MP P W +LL+ C+++ + AD LF+L+ D + V
Sbjct: 515 RAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVT 574
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN++A GRW++ VRK +K GCS+I + + +H F A D SH I A
Sbjct: 575 LLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAA 631
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ +L ++MK AGY+PD L++V+EEEK + +HSEK+A+A+GLI+ PPG P+ I K
Sbjct: 632 EIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVK 691
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR C DCH+A KFIS IVGR+++VRD+ RFH F +G CSC DYW
Sbjct: 692 NLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 198/408 (48%), Gaps = 11/408 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
M E + P+ F S+ G+ LHA+ L++ + D+ +G + MY++
Sbjct: 49 MVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCR 108
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF---INLRRTGGEPDLITFCA 116
+ A K FDEM ++ L TWNA I+ G + A+ + ++ G +PD ITF +
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L AC+ + GR++ V SG+ + V N L++ Y KC + A+ VFD + +++
Sbjct: 169 ALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
++W +M+ Y + ++F +P +L+AC + LE GR++H
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHR 288
Query: 237 VAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ E ++ +G+ L++MY KC S+++A F +M R+++ WN +I Y G A
Sbjct: 289 KVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAK 348
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F++ M+ E V PN +TL VLSAC+ GA +G K +++ K
Sbjct: 349 DALDIFKQ---MQLENVAPNEITLSNVLSACAVLGAKRQG-KAVHALIASGRCKADVVLE 404
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
++++ R G +D + + + +S W L+ A +G G
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 23/387 (5%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY K G DA +F + N +W ++ G + A+ + + G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
F + CS L+ G+ LH ++ + + ++ + L+ Y +C ++ LA+ FD +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMF---LTARREGVEPKDFMISSVLSACARIAGLE 229
K V+W +++ Y +N + +++ ++ EG++P SS L AC + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
GR + A V + + V +AL++MY KCGS++ A F+++ R+++ WN +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
QG A AL F+ M + PN VT + +L+AC+ +E+G I + +
Sbjct: 241 KQGAATQALELFQRMGPN--DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVR-----ED 293
Query: 350 GAEHYACVVDLLGR-----AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
G E + ++L + ++ A ++ + M R I+ W L+ A YG+ +
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVIT-WNILIVAYVQYGQAK---- 348
Query: 405 AADNLFKLDP--NDSGNHVLLSNMFAA 429
A ++FK N + N + LSN+ +A
Sbjct: 349 DALDIFKQMQLENVAPNEITLSNVLSA 375
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E ++PN+ T + A + L GK +HAL DV + S +MY++ G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DD +F + +++L +W+ I+ G + ++ F L + G D +T + L+A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVS-----VCNGLVDFYGKCNEVGLAK-VVFDGIID 174
CS +L+ G Q FL G G +C +VD + + A+ ++ D
Sbjct: 477 CSHGGMLKEGVQT--FLSMVGDHGLAPDYRHFLC--MVDLLSRAGRLEAAENLIHDMPFL 532
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISS 217
+ V+W S+L +GC++ +R V K F + S
Sbjct: 533 PDAVAWTSLL----------SGCKLHNDTKRAARVADKLFELES 566
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 331/587 (56%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R S N TF A + G+ LH L + SG + +G + MY K G
Sbjct: 454 MIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGG 513
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ ++ +MP R++ WNA I P A+ AF LR G + IT + L+A
Sbjct: 514 MSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSA 573
Query: 121 C-SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C LL+ G+ LH ++V +GF+ + V N L+ Y KC ++ ++ +F+G+ +++ ++
Sbjct: 574 CLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT 633
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W ++L + E ++ R G+ F S LSA A++A LE G+ +H +AV
Sbjct: 634 WNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 693
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E + F+ +A DMY KCG I + R+L WN +I G+ +
Sbjct: 694 KLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCE 753
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+F EM M + P +VT V +L+ACS G V++G+ + + +G++P EH CV+D
Sbjct: 754 TFHEMLEMGIK--PGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVID 811
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+G + A I +MPM+P VW +LL +C+++ + GR AA+NL KL+P D
Sbjct: 812 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSV 871
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
VL SNMFA TGRWE+ + VRK+M IKK CSW+ +K+++ F D +H + EI
Sbjct: 872 FVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 931
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A L +++ +K +GY+ DT+ AL D +EE+K + +HSE++ALA+ L++ P G +RI
Sbjct: 932 YAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRI 991
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCHS +KF+S ++GR +++RD RFH F G CSC DYW
Sbjct: 992 FKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
I P+ F L A + + G Q+H KSG + DV+V + +Y GL +
Sbjct: 155 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 214
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+F+EMP+RN+ +W + + G P+ ID + ++R G E + + +++C
Sbjct: 215 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLL 274
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LGRQ+ G +++SG + ++V N L+ +G V A +F+ I +++ +SW S++
Sbjct: 275 KDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIV 334
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN E ++F RR E +S++LS + + GR +H + VK +
Sbjct: 335 AAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFD 394
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ V + L+ MY G ++A++ F +MP ++L+ WN+++ + + G + AL M
Sbjct: 395 SVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSM 454
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+R NYVT L+AC +KG +I + + + G+ +V + G+
Sbjct: 455 --IRTGKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQIIGNALVSMYGKI 511
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G + + ++ +MP R ++ W AL+
Sbjct: 512 GGMSTSRRVLLQMPRRDVVA-WNALI 536
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 192/401 (47%), Gaps = 5/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+ + + + L G+Q+ +KSG + V S M+ G
Sbjct: 252 MRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGN 311
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A+ +F+++ ER+ +WN+ ++ G + + F +RR E + T L+
Sbjct: 312 VDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSV 371
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
D + GR +HG +V+ GFD V VCN L+ Y A +VF + K+ +SW
Sbjct: 372 LGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISW 431
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ +V + + + + R G +S L+AC + GR +H + V
Sbjct: 432 NSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVV 491
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + N +G+ALV MYGK G + + +MP R++V WNA+IGGYA D AL++
Sbjct: 492 SGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAA 551
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ ++R E V NY+T+V VLSAC G + + K ++ + G + ++
Sbjct: 552 FQ---TLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 608
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G + + ++ + R I+ W A+L A +G E
Sbjct: 609 MYAKCGDLSSSQDLFNGLDNRSIIT-WNAILAANAHHGHGE 648
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 190/395 (48%), Gaps = 17/395 (4%)
Query: 5 CISPNDFTFPCL--FKAS--SALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
C S +D P L F + S + TG+ LHAL +K V + +MY+K G
Sbjct: 49 CFSLSDHWNPELSCFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGR 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD+MP RN +WN +S V G ++ F + G +P + + A
Sbjct: 109 VKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTA 168
Query: 121 CSDC-SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C S+ + G Q+HGF+ +SG +V V ++ YG V ++ VF+ + D+N VS
Sbjct: 169 CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 228
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++V Y E E ++ + R EGVE + +S V+S+C + LGR + +
Sbjct: 229 WTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVI 288
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ +E + V ++L+ M+G G++ A FN++ ER+ + WN+I+ YA GH + +
Sbjct: 289 KSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSR 348
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M E N T+ +LS + G I + +K G + CV +
Sbjct: 349 IFNLMRRFHDEV--NSTTVSTLLSVLGDVDHQKWGRGIHGLV-----VKMGFDSVVCVCN 401
Query: 360 LLGR----AGLVDRAYEIIKEMPMRPTISVWGALL 390
L R AG + A + K+MP + IS W +L+
Sbjct: 402 TLLRMYAGAGRSEEADLVFKQMPTKDLIS-WNSLM 435
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/555 (38%), Positives = 316/555 (56%), Gaps = 7/555 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+A+ +++ H++ + + + + G D A K+FDEM ERN+ATWNA +S +
Sbjct: 15 FNAMPMRNIMSHNILI-----NGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEF 69
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+N + F + G PD T + L C+ G+Q+H ++++ G++ N+ V +
Sbjct: 70 NENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSS 129
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L Y K +G + V + +N V+W +++ QN E ++ + G+ P
Sbjct: 130 LAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPD 189
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ SV+S+ A +A L G+ +HA A+KA + V S+L+ MY KCG ++D+ A
Sbjct: 190 KITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALL 249
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ V W+++I Y G + A+ FE+M N VT + +L ACS G
Sbjct: 250 DCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGG--NDVTFLSLLYACSHNGLK 307
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
EKGM F M KYG+KP EHY CVVDLLGR+G +D A +I+ MP+ + +W LL+
Sbjct: 308 EKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLS 367
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
ACR++ ++ A+ + +L+P DS +VLLSN+ A+ RW++ VR M+D +KK
Sbjct: 368 ACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKE 427
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
G SW+ VKNR+ F D SH + EI L +L EEMK GY+PDT +D + EEK
Sbjct: 428 PGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEK 487
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ +HSEK+A+AFGL+ IPPG PIR+ KNLRIC DCH A K IS I RE+IVRD +R
Sbjct: 488 ENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSR 547
Query: 572 FHRFWDGYCSCSDYW 586
FH F G CSC DYW
Sbjct: 548 FHHFKHGKCSCGDYW 562
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 8/331 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT + + + L GKQ+HA LK G ++ VG S MY K+G + +K+
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
M RN+ WN I+ G + +D + ++ +G PD IT + +++ ++ + L
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSML 184
G+Q+H +++G + V+V + L+ Y KC G + ++D + V W SM+
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKC---GCLEDSMKALLDCEHPDSVLWSSMI 263
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACV 243
Y + E +F +EG+ D S+L AC+ E G + V K +
Sbjct: 264 AAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGL 323
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + + +VD+ G+ G + +AE MP E ++V W ++ +ADMA + E
Sbjct: 324 KPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAE 383
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
E+ + + YV L + ++ R V K
Sbjct: 384 EILRLNPQDSATYVLLSNIHASAKRWKDVSK 414
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ T + +S+ L G+Q+HA A+K+G V V S MYSK G
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGC 240
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D+ K + + W++ I+ GR + A+ F + + G + +TF + L A
Sbjct: 241 LEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYA 300
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L + G +V + G + +VD G+ + A+ + + ++ + V
Sbjct: 301 CSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVV 360
Query: 179 SWCSML 184
W ++L
Sbjct: 361 IWKTLL 366
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA---- 311
MY K G IQ+A FN MP RN++ N +I G+ G D A+ F+EM
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 312 -------------------------VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
+P+ TL VL C+ A G ++ ++ LKYG
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQV-HAYVLKYG 119
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ + + + ++G + ++IK M +R ++ W L+
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVA-WNTLI 162
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 324/561 (57%), Gaps = 9/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K +HA + H++ +G + MY K GL D+A K+ MPER++ TWNA I
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADD 629
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P I AF +RR G + IT L C S LL+ G +H +V +GF+ + V
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYV 689
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+ Y +C ++ + +FD + +KN +W ++ E + R +GV
Sbjct: 690 QSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGV 749
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ F S L+ + L+ G+ +H+ +K E + +V +A +DMYGKCG I D
Sbjct: 750 DLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDV-- 807
Query: 269 AFNKMPE---RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F +P R+ WN +I A G A +F EM + + P++VT V +LSAC
Sbjct: 808 -FRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLK--PDHVTFVSLLSAC 864
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S G V++G+ F SMT ++G+ EH C++DLLGR+G + A I +MP+ P V
Sbjct: 865 SHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFV 924
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL AC+V+G ELGR AAD LF+L+ +D +VL SN+ A+T RW + + VRK+M+
Sbjct: 925 WRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMES 984
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+KK CSWI +KN++ F D H ++ +I A L +LR+ + G++PDT++AL D
Sbjct: 985 QSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQD 1044
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+EE+K + +HSE+IALAFGLI G P+RI KNLR+CGDCHS FK +S IVGR+++
Sbjct: 1045 TDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIV 1104
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+ RFH F G CSCSDYW
Sbjct: 1105 VRDSYRFHHFHGGKCSCSDYW 1125
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 8/363 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+Q+H +K G + +VFVG S Y G +A+K+F+E+ E N+ +W + +
Sbjct: 268 ARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYAD 327
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVS 147
G K ++ + +LR G T + C +G Q+ G +++SG D +VS
Sbjct: 328 NGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVS 387
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ +G + V A VF+ + +++ +SW S++ N E F RR
Sbjct: 388 VANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTH 447
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ IS++L AC L+ GR +H + K+ +E N+ V ++L+ MY + GS +DAE
Sbjct: 448 PKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAE 507
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ F+ MP R+L+ WN+++ + G A+ EM ++ NYVT LSAC
Sbjct: 508 LVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEM--LKTRKAMNYVTFTTALSACYN 565
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+EK +KI ++ + + + +V + G+ GL+D A ++ K MP R ++ W
Sbjct: 566 ---LEK-LKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVT-WN 620
Query: 388 ALL 390
AL+
Sbjct: 621 ALI 623
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 176/368 (47%), Gaps = 14/368 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK LHAL +K + F + +MYSK G A +FD+M +RN A+WN IS V
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVS 147
G A+ F ++ G P + + AC + G RQ+HG++V+ G NV
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+ FYG V A +F+ I + N VSW S++V Y N + ++ R G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-GNIFVGSALVDMYGKCGSIQDA 266
+ +++V+ C +G + +K+ ++ ++ V ++L+ M+G S+++A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
FN M ER+ + WN+II AH G + +L F M R +Y+T+ +L AC
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMR--RTHPKTDYITISALLPACG 463
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPT 382
A ++ G + +T K G E CV + + +AG + A + MP R
Sbjct: 464 SAQHLKWGRGLHGLIT-----KSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDL 518
Query: 383 ISVWGALL 390
IS W +++
Sbjct: 519 IS-WNSMM 525
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MRR + T L A SA H+ G+ LH L KSG +V V S MY++ G
Sbjct: 443 MRRTHPKTDYITISALLPACGSAQHLK-WGRGLHGLITKSGLESNVCVCNSLLSMYAQAG 501
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+DA+ +F MP R+L +WN+ +++ V G+ +AI + + +T + +TF L+
Sbjct: 502 SSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALS 561
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC + L++ +H F++ N+ + N LV YGK + A+ V + +++ V+
Sbjct: 562 ACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVT 618
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG-LELGRSVHAVA 238
W +++ + + + Q F RREG+ I ++L C L+ G +HA
Sbjct: 619 WNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHI 678
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V A E + +V S+L+ MY +CG + + F+ + +N WNAI AH G + AL
Sbjct: 679 VVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEAL 738
Query: 299 SSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ + MR + V + + L+ +++G ++ +S +K G +
Sbjct: 739 ---KFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQL-HSWIIKLGFELDEYVLNAT 794
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+D+ G+ G +D + I+ +R S W L++A +G
Sbjct: 795 MDMYGKCGEIDDVFRILPIPKIRSKRS-WNILISALARHG 833
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 6/281 (2%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S+ S +G+ LH V+ N N LV+ Y K + A+ VFD + D+ND SW
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVK 240
+M+ +V+ Q F GV P ++I+S+++AC R + G R +H VK
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+FVG++L+ YG GS+ +A F ++ E N+V W +++ YA GH L+
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNI 337
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVD 359
+ + N T+ V+ C G G +I + +K G+ + A ++
Sbjct: 338 YRHLRHNGLICTGN--TMATVIRTCGMFGDKTMGYQILGDV-IKSGLDTSSVSVANSLIS 394
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G V+ A + M R TIS W +++ A G+ E
Sbjct: 395 MFGNYDSVEEASRVFNNMQERDTIS-WNSIITASAHNGRFE 434
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 19/355 (5%)
Query: 1 MRRECISPNDFTFPCLF-KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MRRE + N T L S ++ G +HA + +G D +V S MY++ G
Sbjct: 642 MRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCG 701
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ + +FD + +N +TWNA S G + A+ +R G + D +F L
Sbjct: 702 DLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALA 761
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ ++L G+QLH ++++ GF+ + V N +D YGKC E+ + ++ S
Sbjct: 762 TIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRS 821
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA--- 236
W ++ ++ + F G++P S+LSAC+ ++ G +
Sbjct: 822 WNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMT 881
Query: 237 ------VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYA 289
A++ CV ++D+ G+ G + +AE +KMP N W +++
Sbjct: 882 SEFGVPTAIEHCV--------CIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACK 933
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
G+ ++ + + + + YV V ++ R G VE K S +LK
Sbjct: 934 VHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLK 988
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 334/611 (54%), Gaps = 58/611 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD--ADKMFDEMPERNLATWNAYISNAV 87
KQ+HA +K+GQ HD + + + + +D A +FD++PERN WN I
Sbjct: 32 KQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIR--A 89
Query: 88 LGGRPKNAIDAFI----NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF- 142
L +DA + L EP+ TF + L AC+ + L G+Q+HG L++ G
Sbjct: 90 LAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLV 149
Query: 143 ----------------------------------------------DGNVSVCNGLVDFY 156
+ NV +CN +VD Y
Sbjct: 150 DDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGY 209
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMI 215
+ + A+ +FD + ++ VSW M+ Y QN + ++F + G V P +
Sbjct: 210 ARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTL 269
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
SVL A +R+ LELG+ VH A K + + +GSALVDMY KCGSI+ A F ++P+
Sbjct: 270 VSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQ 329
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
N++ WNA+IGG A G A+ + M +C P+ VT + +LSACS AG V++G
Sbjct: 330 NNVITWNAVIGGLAMHGKANDIFNYLSRME--KCGISPSDVTYIAILSACSHAGLVDEGR 387
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F M G+KP EHY C+VDLLGRAG ++ A E+I MPM+P +W ALL A ++
Sbjct: 388 SFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKM 447
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ ++G AA+ L ++ P+DSG +V LSNM+A++G W+ VR MKD+ I+K GCS
Sbjct: 448 HKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCS 507
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
WI + IH F +D SH R +I +ML ++ ++ G++PDT L ++E+ K + +
Sbjct: 508 WIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVL 567
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
+HSEKIA+AFGLI+ PP P+ I KNLRIC DCHS+ K IS + R++++RD RFH F
Sbjct: 568 HYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHF 627
Query: 576 WDGYCSCSDYW 586
G CSC DYW
Sbjct: 628 EHGSCSCMDYW 638
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 60/329 (18%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN--EVGLAKVVFDGIIDKNDVSWC 181
C ++ +Q+H FLV++G + ++ ++ + ++G A VFD + ++N +W
Sbjct: 25 CKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWN 84
Query: 182 SMLVVYVQNYEEENG-----CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+++ + + CQM A VEP F SVL ACA +A L G+ VH
Sbjct: 85 TVIRALAETQDRHLDALLVFCQMLSEA---TVEPNQFTFPSVLKACAVMARLAEGKQVHG 141
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEI---------------------------- 268
+ +K + + FV + L+ MY CGS++DA +
Sbjct: 142 LLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVL 201
Query: 269 -------------------AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
F++M +R++V WN +I GYA G A+ F M M
Sbjct: 202 CNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQM-G 260
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ +PN VTLV VL A SR G +E G K + K I+ + +VD+ + G +++
Sbjct: 261 DVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEK 319
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGK 398
A ++ + +P I+ W A++ ++GK
Sbjct: 320 AIQVFERLPQNNVIT-WNAVIGGLAMHGK 347
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 58/367 (15%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTFP + KA + + GKQ+H L LK G + D FV + MY G +DA+
Sbjct: 113 VEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDAN 172
Query: 66 -----------------------------------------------KMFDEMPERNLAT 78
++FD M +R++ +
Sbjct: 173 VLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVS 232
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFL 137
WN IS G K AI+ F + + G P+ +T + L A S +L+LG+ +H +
Sbjct: 233 WNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYA 292
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
++ + + + LVD Y KC + A VF+ + N ++W +++ + + +
Sbjct: 293 EKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIF 352
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-----VHAVAVKACVEGNIFVGSA 252
+ G+ P D ++LSAC+ ++ GRS V++V +K +E
Sbjct: 353 NYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHY----GC 408
Query: 253 LVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
+VD+ G+ G +++AE MP + + V W A++G + + + + E + M
Sbjct: 409 MVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHD 468
Query: 312 VPNYVTL 318
YV L
Sbjct: 469 SGAYVAL 475
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 319/560 (56%), Gaps = 3/560 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPER-NLATWNAYISNAV 87
G+QLHA L SG D + D+Y+ GL A ++FDEMP + N+ WN I
Sbjct: 82 GRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141
Query: 88 LGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + AI+ + + G EPD T+ L AC+ L GR++H ++R+ + +V
Sbjct: 142 RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADV 201
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC GL+D Y KC V A VFD ++ V W SM+ QN + E
Sbjct: 202 FVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAE 261
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ P + S +SA A L GR +H + + ++L+DMY K G + A
Sbjct: 262 GIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVA 321
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ F+++ R L+ WNA+I G+ GHAD A F M + + +P+++T V VLSAC+
Sbjct: 322 RVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN-EAQVMPDHITFVGVLSACN 380
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G V++ ++F M Y IKP +HY C+VD+LG +G A ++IK M ++P +W
Sbjct: 381 HGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIW 440
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
GALLN C+++ EL +A L +L+P D+GN+VLLSN++A +G+WEEA VRK M +
Sbjct: 441 GALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNR 500
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G+KK CSWI +K + H F D SH R+ EI L +L + GY+PDT ++V
Sbjct: 501 GLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNV 560
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
E++EK V HSE++A+AFGLI+ PPG + +TKNLR+C DCH K IS I RE+I+
Sbjct: 561 EDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIII 620
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD NR+H F +G CSC D+W
Sbjct: 621 RDVNRYHHFVNGECSCKDHW 640
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 10/342 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++FT+P + KA +AL G+++H +++ DVFV DMY+K G D+A
Sbjct: 162 MEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAW 221
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD R+ WN+ I+ GRP A+ N+ G P ++T + ++A +D
Sbjct: 222 AVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAG 281
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR+LHG+ R GF + L+D Y K V +A+V+FD + + +SW +M+
Sbjct: 282 ALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMIC 341
Query: 186 VYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CV 243
+ + ++ C++F R E V P VLSAC ++ + V + V +
Sbjct: 342 GFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSI 401
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKM---PERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + LVD+ G G ++A M P+ + W A++ G + ++A +
Sbjct: 402 KPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGI--WGALLNGCKIHKNVELAELA 459
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
++ + E NYV L + +++G E+ ++ MT
Sbjct: 460 LHKLIELEPEDAGNYVLLSNIY---AQSGKWEEAARVRKLMT 498
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 8/280 (2%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L +C ++ GRQLH L+ SG + + LVD Y C V +A+ +FD +
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 174 DKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELG 231
++ +V W ++ Y ++ E +++ G +EP +F VL ACA + L G
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAG 185
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R VH ++ ++FV + L+DMY KCG + +A F+ R+ V WN++I
Sbjct: 186 REVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQN 245
Query: 292 GHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G AL+ M + E + P VTLV +SA + AGA+ +G ++ + + G
Sbjct: 246 GRPAEALALCRNMAA---EGIAPTIVTLVSAISAAADAGALPRGREL-HGYGWRRGFGSQ 301
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ ++D+ ++G V A + ++ R IS W A++
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELIS-WNAMI 340
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/577 (39%), Positives = 328/577 (56%), Gaps = 8/577 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ + K + L +QLH+ LK G V + D YSK G DA +F
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 72 P-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
RN+ +W A IS + G A+ F +R P+ T+ A L A SL L
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILP 419
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H ++++ + SV L+ Y K A +F I K+ V+W +ML + Q
Sbjct: 420 PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACA-RIAGLELGRSVHAVAVKACVEGNIFV 249
+ E +F +G++P +F ISSV+ ACA AG++ GR HA+++K I V
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
SALV MY + G+I A+I F + +R+LV WN++I GYA G++ A+ +F +M +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ + VT + V+ C+ G V +G + F SM + I P EHYAC+VDL RAG +D
Sbjct: 600 QM--DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDE 657
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+I++MP VW LL ACRV+ ELG+ +AD L L+P+DS +VLLSN++AA
Sbjct: 658 TMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAA 717
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
G+W+E D VRK M +KK AGCSWI +KN++H F A D SH + +I L +
Sbjct: 718 AGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITR 777
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+K GY P+T+F L+D+ E++K + HSE++ALAFGLIA PPG P++I KNLR+CGDC
Sbjct: 778 LKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDC 837
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H K +S I RE+I+RD +RFH F G CSC D+W
Sbjct: 838 HMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 10/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I PN FTF + A ++ G+++HA ++K G VFV S +MY+K GL
Sbjct: 192 MRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGL 251
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ M R++ +WN ++ L A+ F R T G+ T+ +
Sbjct: 252 VEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKL 311
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVS 179
C++ L L RQLH +++ GF +V L D Y KC E+ A +F +N VS
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ +QN + +F R + V P +F S++L A I L +HA +
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVI 427
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + VG+AL+ Y K GS +DA F + ++++V W+A++ +A G + A
Sbjct: 428 KTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACS-RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +M + PN T+ V+ AC+ + V++G + F+++++KY + +V
Sbjct: 488 LFNKMAIQGIK--PNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALV 544
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G +D A + + R +S W ++++ +G
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVS-WNSMISGYAQHG 582
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 180/398 (45%), Gaps = 22/398 (5%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD---VFVGCSAFDMYSKT 58
RR + + T C+ KA ++ V G+QLH L +K G HD V G S DMY K
Sbjct: 91 RRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG--HDRGEVSAGTSLVDMYMKC 148
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G + ++F+ MP++N+ TW + ++ + F +R G P+ TF + L
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+A + L LG+++H V+ G +V VCN L++ Y KC V AK VF+ + ++ V
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMV 268
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +++ N E Q+F +R + ++V+ CA + L L R +H+
Sbjct: 269 SWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCV 328
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+K V +AL D Y KCG + DA F+ RN+V W AII G G +A
Sbjct: 329 LKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F M R +PN T +L A + I IK +H V
Sbjct: 389 VVLFSRMREDR--VMPNEFTYSAMLKA---------SLSILPPQIHAQVIKTNYQHIPSV 437
Query: 358 VDLL----GRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
L + G + A I K + + ++ W A+L+
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVA-WSAMLS 474
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 146/328 (44%), Gaps = 5/328 (1%)
Query: 68 FDEMPERNLAT-WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
DE+P R+ A N + + G +D F RR G D T L AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 127 LQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LG QLH V+ G D G VS LVD Y KC V VF+G+ KN V+W S+L
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+F R EG+ P F +SVLSA A L+LG+ VHA +VK
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV ++L++MY KCG ++DA+ FN M R++V WN ++ G AL F E
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + + V L A + A+ + + +S LK+G + D + G
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQL---HSCVLKHGFHLTGNVMTALADAYSKCG 351
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ A I + W A+++ C
Sbjct: 352 ELADALNIFSMTTGSRNVVSWTAIISGC 379
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 313/532 (58%), Gaps = 2/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G + A K+FDEMP RN+ATWNA ++ G + ++ F +RR G +PD
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ C+ + GRQ+H ++VRSG D ++ V + L Y +C + + +
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 237
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N VS + + QN + E + F R GVE S +++C+ +A L G+ +
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 297
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+A+K V+ + V ++LV MY +CG + D+E + +LV +A+I Y GH
Sbjct: 298 HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHG 357
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ F++M M A PN VT + +L ACS +G ++GM F MT YG++P +HY
Sbjct: 358 QKAVGLFKQM--MAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHY 415
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VDLLGR+G ++ A ++I MP++P +W LL+AC+ K ++ A+ + +LDP
Sbjct: 416 TCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDP 475
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+DS ++VLLSN+ A + RWE+ VR+ M++ ++K G SW+ +K +IH F D SH
Sbjct: 476 HDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHS 535
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
R EI L ++ ++ GY PD + +D+E+EEK + HHSEK+A+AF +++P G
Sbjct: 536 RQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEG 595
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
VPIR+ KNLR+C DCH A K +S ++GRE++VRD +RFH F DG CSC DYW
Sbjct: 596 VPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 10/339 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + P+++ LF+ + L V+G+Q+HA ++SG D+ VG S MY + G
Sbjct: 165 MRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGF 224
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D + +P N+ + N IS G + A++ F +R G E + +TF + + +
Sbjct: 225 LRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTS 284
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV---FDGIIDKND 177
CSD + L G+Q+H +++G D V V LV Y +C +G ++ V + G D
Sbjct: 285 CSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG----TD 340
Query: 178 VSWCS-MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ CS M+ Y + + +F G EP + ++L AC+ + G +
Sbjct: 341 LVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFE 400
Query: 237 VAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
+ K ++ ++ + +VD+ G+ G + +AE MP + + V W ++ Q
Sbjct: 401 LMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKF 460
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
DMA E + + +YV L + + SR V K
Sbjct: 461 DMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSK 499
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
NV N L+ Y K ++ A+ +FD + +N +W +M+ + E F R
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
REG++P ++ + S+ CA + + GR VHA V++ ++ ++ VGS+L MY +CG ++
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D E A +P N+V N I G G A+ AL F M EA N VT V +++
Sbjct: 227 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEA--NAVTFVSAVTS 284
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
CS A+ +G +I +++ +K G+ +V + R G
Sbjct: 285 CSDLAALAQGQQI-HALAIKTGVDKVVPVMTSLVHMYSRCG 324
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
REG+ + + S + AC L L R +HA A + + F + L+ Y G
Sbjct: 38 REGLWSEPGLFSHIFRACQ---ALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFP 94
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A F ++P+RN++ WN +IGGY G + A F+EM + N T +++
Sbjct: 95 TARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR------NVATWNAMVAG 148
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKP 349
+ +G E+ + F++M + G++P
Sbjct: 149 LTNSGLNEESLGFFFAMR-REGMQP 172
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 313/532 (58%), Gaps = 2/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G + A K+FDEMP RN+ATWNA ++ G + ++ F +RR G +PD
Sbjct: 10 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 69
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ C+ + GRQ+H ++VRSG D ++ V + L Y +C + + +
Sbjct: 70 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 129
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N VS + + QN + E + F R GVE S +++C+ +A L G+ +
Sbjct: 130 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQI 189
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA+A+K V+ + V ++LV MY +CG + D+E + +LV +A+I Y GH
Sbjct: 190 HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHG 249
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ F++M M A PN VT + +L ACS +G ++GM F MT YG++P +HY
Sbjct: 250 QKAVGLFKQM--MAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHY 307
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VDLLGR+G ++ A ++I MP++P +W LL+AC+ K ++ A+ + +LDP
Sbjct: 308 TCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDP 367
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+DS ++VLLSN+ A + RWE+ VR+ M++ ++K G SW+ +K +IH F D SH
Sbjct: 368 HDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHS 427
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
R EI L ++ ++ GY PD + +D+E+EEK + HHSEK+A+AF +++P G
Sbjct: 428 RQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEG 487
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
VPIR+ KNLR+C DCH A K +S ++GRE++VRD +RFH F DG CSC DYW
Sbjct: 488 VPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 10/339 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + P+++ LF+ + L V+G+Q+HA ++SG D+ VG S MY + G
Sbjct: 57 MRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGF 116
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D + +P N+ + N IS G + A++ F +R G E + +TF + + +
Sbjct: 117 LRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTS 176
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV---FDGIIDKND 177
CSD + L G+Q+H +++G D V V LV Y +C +G ++ V + G D
Sbjct: 177 CSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG----TD 232
Query: 178 VSWCS-MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ CS M+ Y + + +F G EP + ++L AC+ + G +
Sbjct: 233 LVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFE 292
Query: 237 VAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
+ K ++ ++ + +VD+ G+ G + +AE MP + + V W ++ Q
Sbjct: 293 LMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKF 352
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
DMA E + + +YV L + + SR V K
Sbjct: 353 DMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSK 391
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+ Y K ++ A+ +FD + +N +W +M+ + E F RREG++
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P ++ + S+ CA + + GR VHA V++ ++ ++ VGS+L MY +CG ++D E A
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+P N+V N I G G A+ AL F M EA N VT V +++CS
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEA--NAVTFVSAVTSCSDLA 181
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
A+ +G +I +++ +K G+ +V + R G
Sbjct: 182 ALAQGQQI-HALAIKTGVDKVVPVMTSLVHMYSRCG 216
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/592 (39%), Positives = 338/592 (57%), Gaps = 14/592 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M P+ +T + A + L G+QLH+LAL+ G D V C DMY+K+
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 61 KD---DADKMFDEMPERNLATWNAYISNAVLGGRPKNAID-AFINLRRTGGEPDLITFCA 116
+A ++F+ MP+ N+ W A +S V G N + F + G P+ IT+ +
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC++ GRQ+H V+S D NV V N LV Y + + A+ FD + +K
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VS+ L N Q + R E + F S++SA A + L G+ +H
Sbjct: 425 NMVSFSGNL----DGDGRSNTYQDYQIERME-LGISTFTFGSLISAAASVGMLTKGQRLH 479
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A+++KA + +G++LV MY +CG + DA F++M + N++ W ++I G A G+A
Sbjct: 480 ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAA 539
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F +M + + PN VT + VLSACS AG V++G + F M +G+ P EHYA
Sbjct: 540 RALELFHDMIAAGVK--PNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYA 597
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VDLLGR+GLV+ A + I EMP + VW LL AC+ + ++G IAA+++ +L+P
Sbjct: 598 CMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQ 657
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
D +VLLSN++A G W++ +R M+D + K G SW+ V N IH F+A DTSH +
Sbjct: 658 DPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQ 717
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
EI L L E+K GY+PDT+ L+D+ +E K + HSEKIA+AFGLI+
Sbjct: 718 AEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSAT 777
Query: 536 -PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCHSA K++S GRE+I+RD+NRFHR DG CSC +YW
Sbjct: 778 KPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 15/400 (3%)
Query: 4 ECISPNDFTFPCLFKASSALHI-PVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLK 61
E + PN FT +A A + + G + L K G DV VGC+ DM++K G
Sbjct: 146 EGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDL 205
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
++FD + ER + W I+ G A++ F+++ G +PD T + L+AC
Sbjct: 206 VAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSAC 265
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN---EVGLAKVVFDGIIDKNDV 178
++ +LG+QLH +R G + + V GLVD Y K + + A+ VF+ + N +
Sbjct: 266 TELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVM 325
Query: 179 SWCSMLVVYVQNYEEENGCQ-MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+W ++L YVQ ++N +F EG+ P SS+L ACA + + GR +H
Sbjct: 326 AWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTH 385
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK+ + VG+ALV MY + GSI++A AF+++ E+N+V ++ + G D
Sbjct: 386 CVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG-------DGR 438
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+++++ R E + T ++SA + G + KG ++ ++++LK G +
Sbjct: 439 SNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRL-HALSLKAGFGSDRAIGNSL 497
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V + R G + A ++ EM IS W ++++ +G
Sbjct: 498 VSMYSRCGYLVDACQVFDEMNDHNVIS-WTSMISGLAKHG 536
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 175/371 (47%), Gaps = 13/371 (3%)
Query: 29 GKQLHALALKSGQI--HDVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYIS 84
G+ L L++G + D V S +YSK A +FD MP R+L +W A S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL-GRQLHGFLVRSGFD 143
G A+ F G P+ T CA AC L L G + G + + GF
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185
Query: 144 G-NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G +VSV L+D + K ++ + VFDG+ ++ V W ++ Y Q+ + ++FL
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC-- 260
G +P + +SS+LSAC + LG+ +H++A++ +E + V LVDMY K
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 261 -GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTL 318
S+ +A FN+MP+ N++ W A++ GY +G D + M E + PN++T
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMIL--FCKMLNEGIRPNHITY 363
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+L AC+ G + G +I ++ +K + +V + +G ++ A ++
Sbjct: 364 SSMLKACANLGDQDSGRQI-HTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLY 422
Query: 379 MRPTISVWGAL 389
+ +S G L
Sbjct: 423 EKNMVSFSGNL 433
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 173/377 (45%), Gaps = 41/377 (10%)
Query: 127 LQLGRQLHGFLVRSG--FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCS 182
+ LGR L G L+R+G + + V N L+ Y KC+ V A+ VFDG+ ++ VSW +
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL-GRSVHAVAVKA 241
M +N E ++F EG+ P F + + AC L G +V + K
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 242 CVEG-NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
G ++ VG AL+DM+ K G + F+ + ER +V W +I YA G++D A+
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ TL +LSAC+ G+ G ++ +S+ L+ G++ + +VD+
Sbjct: 243 FLDMLENGFQ--PDQYTLSSMLSACTELGSFRLGQQL-HSLALRLGLESDSCVSCGLVDM 299
Query: 361 LGRA---GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN----LF--K 411
++ + A E+ MP + + W ALL+ + R + DN LF
Sbjct: 300 YAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSG-------YVQRGSQDNQVMILFCKM 351
Query: 412 LDPNDSGNHVLLSNMFAA--------TGRWEEADLVRKEMKDVGIKKGAGCSWI----SV 459
L+ NH+ S+M A +GR V+ + D+ + A S S+
Sbjct: 352 LNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSI 411
Query: 460 KNRIHIFQAKDTSHERN 476
+ H F D +E+N
Sbjct: 412 EEARHAF---DQLYEKN 425
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/622 (37%), Positives = 333/622 (53%), Gaps = 38/622 (6%)
Query: 1 MRREC--ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
M EC +PN F + + + L +G+++H L+SG DV + + DMY+K
Sbjct: 115 MLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKC 174
Query: 59 G---------------------------LKDD----ADKMFDEMPERNLATWNAYISNAV 87
G L+D A ++FDE R++++WN +S +
Sbjct: 175 GDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLM 234
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A+ + R G T+ S LGRQLHG +V + + +
Sbjct: 235 RHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAF 294
Query: 148 VCNGLVDFYGKCNEVGLAKVVFD---GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
V L+D Y KC E+ A +FD + +W +M+ YVQN EE + F
Sbjct: 295 VGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRML 354
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
REGV F+++SV SACA +E GR VH K + + SA+VDMY K GS++
Sbjct: 355 REGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLE 414
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F +N+ W ++ YA G MAL F M + + +PN +TLV VLSA
Sbjct: 415 DACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKI--MPNEITLVAVLSA 472
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G V G F M +YGI P EHY C+VDL GRAGL+D+A I+E +
Sbjct: 473 CSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAV 532
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
VW LL+ACR++ E ++A++ L +L+ D+G++VL+SNM+A +W + +R MK
Sbjct: 533 VWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMK 592
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
+ ++K G SWI +KN +H F A DTSH R+ EI A L KL E +K GY T+ ++
Sbjct: 593 ERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVH 652
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
D+EEE++ T + HSEK+A+AFG+I+ P G +RI KNLR+C DCH A KFI+ RE+
Sbjct: 653 DIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREI 712
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+VRD RFH F DG CSC D+W
Sbjct: 713 VVRDLYRFHHFKDGQCSCEDFW 734
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 193/439 (43%), Gaps = 55/439 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+SP F F SSA +P G A A K GC GL + A
Sbjct: 29 LSPQTFIFH-----SSARLLPEAG----ACAAKKAIHRQSVRGCVPSSSVIARGLHN-AH 78
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSD 123
++FD P R+L W + IS GR + + AF + G P+ L C+
Sbjct: 79 RVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAG 138
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
++ GR++HG+++RSG +V +CN ++D Y KC + G A+ F + K+ SW +
Sbjct: 139 LGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIV 198
Query: 184 LVVYVQNYEEENGCQMFLTAR-------------------------------REGVEPKD 212
+ +Q+ + Q+F + R GV +
Sbjct: 199 IRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSN 258
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ S V + ++ +LGR +H V A +E + FVG +L+DMY KCG ++ A F++
Sbjct: 259 YTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR 318
Query: 273 ---MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRA 328
E W+ ++ GY G + AL F M E VP L V SAC+ A
Sbjct: 319 WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLR---EGVPAGQFILTSVASACANA 375
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VE+G ++ + K G + A + +VD+ ++G ++ A I + + +++W
Sbjct: 376 GMVEQGRQV-HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTK-NVALWTT 433
Query: 389 LLNACRVYGKPELGRIAAD 407
+L + +G+ GR+A +
Sbjct: 434 MLCSYASHGQ---GRMALE 449
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 328/590 (55%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTFP K+ +AL +P+ G Q H K G + + FV MY K L
Sbjct: 40 MLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSL 99
Query: 61 KDDADKMFDE-MPERNLAT-WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
D+A K+F+E R L +NA +S V + A+ F + G + +T +
Sbjct: 100 VDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLI 159
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC L+LG LH ++ GFD +VSV N + Y KC V A+ +FD + K +
Sbjct: 160 PACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLI 219
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y QN N +++ GV P + VLS+CA + +G V
Sbjct: 220 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI 279
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ N F+ +AL++MY +CG++ A+ F+ MPER LV W AIIGGY GH ++A+
Sbjct: 280 QASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAV 339
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM +R P+ VCVLSACS AG ++G++ F M Y ++PG EHY+C+V
Sbjct: 340 QLFKEM--IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 397
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG + A +I+ MP++P +VWGALL AC+++ EL +A + + +L+P + G
Sbjct: 398 DLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIG 457
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN+++ + +R MK+ +KK GCS++ +K R+H F D +H ++ E
Sbjct: 458 YYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDE 517
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK--MTEVGHHSEKIALAFGLIAIPPGVP 536
I +L +L + P+ + + EE K T VG HSEK+A+AFGL+ G
Sbjct: 518 IYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAE 573
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ I KNLRIC DCH FK +S IV R++ VRD RFH F +G CSC DYW
Sbjct: 574 VVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 153/335 (45%), Gaps = 10/335 (2%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN + + A+ + + R G P+ TF L +C+ SL LG Q HG +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV--YVQNYEEENG 196
+ G V GL+ Y K + V A+ VF+ ++ C +V YV N +
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+F EGV + ++ AC LELG S+H +K + ++ V + + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCGS+ A+ F++MP + L+ WNA++ GYA G A L + M P+ V
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH--PDPV 254
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TLV VLS+C+ GA G ++ + + G ++++ R G + +A +
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQAS-GFTSNPFLNNALINMYARCGNLTKAQAVFDG 313
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
MP R +S W A++ ++G E+ A LFK
Sbjct: 314 MPERTLVS-WTAIIGGYGMHGHGEI----AVQLFK 343
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 327/561 (58%), Gaps = 6/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFD---MYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQ+ A +K+ D+ V + + T D A +FD++ ++++ +N
Sbjct: 46 KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
P A F L +G PD TF + L AC+ L+ G LH F V+ G + N+
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+C L++ Y +CN++ A+ VFD + VS+ +++ Y ++ + +F +
Sbjct: 166 YICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+EP D + SV+ +CA + L+LG+ +H K + + V +AL+DM+ KCGS+ DA
Sbjct: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDA 285
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M R+ W+A+I +A G A+S FEEM R P+ +T + +L ACS
Sbjct: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK--REGVRPDEITFLGLLYACS 343
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG VE+G FYSM+ YGI PG +HY C+VDLLGRAG +D AY + ++ ++ T +W
Sbjct: 344 HAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILW 403
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL+AC +G E+ + + +F+LD G++V+LSN++A GRWE+ + +RK MKD
Sbjct: 404 RTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDR 463
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-D 505
G+ K GCS + V N +H F + D H + E++ L +L +E+K GY+PDT+ + D
Sbjct: 464 GVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHAD 523
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+EEE K + +HSEK+A+AFGL+ PPG IR+ KNLRICGDCH+A K IS I GR+++
Sbjct: 524 MEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIV 583
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD RFHRF DG CSC D+W
Sbjct: 584 IRDVQRFHRFEDGKCSCGDFW 604
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D+TF L KA ++ G LH A+K G H++++ + +MY++ + A +
Sbjct: 128 PDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGV 187
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDEM + + ++NA I+ +P A+ F L+ + EP +T + + +C+ L
Sbjct: 188 FDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGAL 247
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG+ +H ++ + GFD V V L+D + KC + A +F+G+ ++ +W +M+V +
Sbjct: 248 DLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAF 307
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGN 246
+ + MF +REGV P + +L AC+ +E GR ++++ +
Sbjct: 308 ATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPG 367
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
I +VD+ G+ G + +A +K+ + + W ++ + G+ +MA E +
Sbjct: 368 IKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIF 427
Query: 306 SMRCEAVPNYVTL 318
+ +YV L
Sbjct: 428 ELDDAHGGDYVIL 440
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 7/283 (2%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIID 174
L+ S C+ L +Q+ + +++ ++SV L++F + + A +FD I+D
Sbjct: 33 LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ + + M Y ++ +F G+ P D+ SS+L ACA L G +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H AVK + NI++ L++MY +C + A F++M + +V +NAII GYA
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 212
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ ALS F E+ + E P VT++ V+ +C+ GA++ G K + K G +
Sbjct: 213 NEALSLFRELQASNIE--PTDVTMLSVIMSCALLGALDLG-KWIHEYVKKKGFDKYVKVN 269
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ + G + A I + M +R T W A++ A +G
Sbjct: 270 TALIDMFAKCGSLTDAISIFEGMRVRDT-QAWSAMIVAFATHG 311
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P D T + + + L GK +H K G V V + DM++K G DA
Sbjct: 227 IEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAI 286
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ M R+ W+A I G AI F ++R G PD ITF L ACS
Sbjct: 287 SIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAG 346
Query: 126 LLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ GR + ++ G + +VD G+ + A D + I + W ++
Sbjct: 347 LVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTL 406
Query: 184 L 184
L
Sbjct: 407 L 407
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 327/575 (56%), Gaps = 3/575 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L A L K++ + SG D++V M+ K GL DA K+FDEM
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PE+++A+W + V G A F+ + + + TF + A + L+Q+G+
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q+H ++ G + V L+D Y KC + A VFD + +K V W S++ Y +
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E ++ R G F IS V+ CAR+A LE + HA V+ +I +
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD Y K G ++DA FN+M +N++ WNA+I GY + G A+ FE+M ++
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQM--LQEGV 417
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P +VT + VLSACS +G ++G +IFYSM + +KP A HYAC+++LLGR L+D AY
Sbjct: 418 TPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAY 477
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+I+ P +PT ++W ALL ACR++ ELG++AA+ L+ ++P N+++L N++ ++G
Sbjct: 478 ALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSG 537
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+ +EA + + +K G++ CSW+ VK + + F D SH + EI + L E+
Sbjct: 538 KLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEIC 597
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY + L DV+EEE+ + +HSEK+A+AFGLI P P++IT+ R+CGDCHS
Sbjct: 598 KHGYAEENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHS 656
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A K I+ + GRE++VRD +RFH F +G CSC DYW
Sbjct: 657 AIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + FT + + + L KQ HA ++ G D+ + D YSK G
Sbjct: 311 MRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGR 370
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ M +N+ +WNA I+ G+ + A++ F + + G P +TF A L+A
Sbjct: 371 MEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSA 430
Query: 121 CSDCSLLQLGRQL 133
CS L Q G ++
Sbjct: 431 CSYSGLSQRGWEI 443
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/586 (37%), Positives = 327/586 (55%), Gaps = 6/586 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T A +A G++L+ L D V S MY + ++A+
Sbjct: 129 VRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAE 188
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ FD PE+++ W A IS R A++ + G + L T+ + L+AC+
Sbjct: 189 RAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTM 248
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNG-LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L+ G H G D + +V G LV+ YGKC V A+ V D + + VSW +M+
Sbjct: 249 DLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMI 308
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACV 243
Y QN +F EG EP D + SV+ +CA + L LG+ +HA +
Sbjct: 309 AAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSF 368
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQGHADMALSSF 301
++ + +A++ MYGKCG+++ A F +P R++V W A+I YA G + A+ F
Sbjct: 369 SQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELF 428
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+EM + PN VT + VL ACS G +E+ + F SM +G+ P +HY C+VDLL
Sbjct: 429 QEML-IDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLL 487
Query: 362 GRAGLVDRAYEII-KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GRAG + A +++ + + W A L+AC++ G E + AA + +L+P +
Sbjct: 488 GRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGR 547
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++AA GR + +R EMK G+KK AG SWI + NR+H F D SH R EI
Sbjct: 548 VLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIY 607
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
+ L +L E+K AGY+PDT L DV+EE+K+ +G+HSE++A+A G+I+ PPG +R+
Sbjct: 608 SELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVV 667
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS IVGR++IVRD +RFH F DG CSC DYW
Sbjct: 668 KNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 14/415 (3%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
++LHA + F+G D YSK G A F + N +WN ++
Sbjct: 52 RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G P+ A F + G P+ +T L AC+ L LGR+L+ + + + V
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ L+ YG+C E+ A+ FD +K+ V W +M+ Y N+ ++ EG++
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-GNIFVGSALVDMYGKCGSIQDAEI 268
S+L ACA L G + H A ++ + V LV++YGKCG + DA
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
+ MP R V W A+I YA G+A A++ F+ M E P+ +TL+ V+ +C+
Sbjct: 292 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE--PSDITLISVVDSCAVL 349
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP-TISVWG 387
G + G +I + V+ + G+ G ++ A E+ + +P+R ++ W
Sbjct: 350 GTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWT 409
Query: 388 ALLNACRVYGKPELGRIAADNLFK---LDPNDSGNHVLLSNMFAA---TGRWEEA 436
A++ R Y + +G A + LF+ +D N V ++ A G+ E+A
Sbjct: 410 AMI---RAYAQNGVGEEAIE-LFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQA 460
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 13/275 (4%)
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
C L R+LH + D N + N LVD Y K + A++ F I N SW
Sbjct: 44 QCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNI 103
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ Y QN +F +GV P +S+ L AC L LGR ++ +
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+E + V S+L+ MYG+C I++AE AF++ PE+++VCW A+I YAH AL E
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRAL---E 220
Query: 303 EMTSMRCEAV----PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CV 357
+ M E + P YV+L L AC+ + G+ F+ G+ + A +
Sbjct: 221 LVRRMDLEGIKLGLPTYVSL---LDACASTMDLRNGVA-FHQRAAAIGLDRSSTVVAGTL 276
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
V+L G+ G VD A ++ MP+R ++S W A++ A
Sbjct: 277 VNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAA 310
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 329/590 (55%), Gaps = 10/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R PN FTFP K+ +AL +P+ G Q H K G + + FV MY K L
Sbjct: 31 MLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSL 90
Query: 61 KDDADKMFDE-MPERNLAT-WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
D+A K+F+E R L +NA +S V + +A+ F + G + +T +
Sbjct: 91 VDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLI 150
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC L+LG LH ++ GFD +VSV N + Y KC V A+ +FD + K +
Sbjct: 151 PACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLI 210
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ Y QN N +++ GV P + VLS+CA + +G V
Sbjct: 211 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKM 270
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ N F+ +AL++MY +CG++ A+ F+ MPER LV W AIIGGY GH ++A+
Sbjct: 271 QASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAV 330
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM +R P+ VCVLSACS AG ++G++ F M Y ++PG EHY+C+V
Sbjct: 331 QLFKEM--IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 388
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG + A +I+ MP++P +VWGALL AC+++ EL +A + + +L+P + G
Sbjct: 389 DLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIG 448
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN+++ + +R MK+ +KK GCS++ +K R+H F D +H ++ E
Sbjct: 449 YYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDE 508
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK--MTEVGHHSEKIALAFGLIAIPPGVP 536
I +L +L + P+ + + EE K T VG HSEK+A+AFGL+ G
Sbjct: 509 IYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAE 564
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ I KNLRIC DCH FK +S IV R++ VRD RFH F +G CSC DYW
Sbjct: 565 VVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 10/335 (2%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN + + A+ + + R G P+ TF L +C+ SL LG Q HG +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV--YVQNYEEENG 196
+ G V GL+ Y K + V A+ VF+ ++ C +V YV N + +
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+F EGV + ++ AC LELG S+H +K + ++ V + + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCGS+ A+ F++MP + L+ WNA++ GYA G A L + M P+ V
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVH--PDPV 245
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TLV VLS+C+ GA G ++ + M G ++++ R G + +A +
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQAS-GFTSNPFLNNALINMYARCGNLTKAQAVFDG 304
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
MP R +S W A++ ++G E+ A LFK
Sbjct: 305 MPERTLVS-WTAIIGGYGMHGHGEI----AVQLFK 334
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/557 (36%), Positives = 334/557 (59%), Gaps = 5/557 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ LH +K+ +V + DMYSK G + A ++F +M + + +W + I+ V
Sbjct: 590 GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVR 649
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +AI F ++ G PD+ T + ++AC+ S L GR +H +++++G N+ V
Sbjct: 650 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 709
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L++ Y KC V A++VF I K+ VSW +M+ Y QN ++FL +++
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-F 768
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P D ++ VL ACA +A L+ GR +H ++ ++ V ALVDMY KCG + A++
Sbjct: 769 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 828
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P+++L+ W +I GY G + A+S+F EM E P+ + +L+ACS +
Sbjct: 829 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE--PDESSFSVILNACSHS 886
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + +G K F SM + G++P EHYACVVDLL R G + +AY+ I+ MP++P ++WG
Sbjct: 887 GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 946
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+ CR++ +L A+++F+L+P+++ +V+L+N++A +WEE +RK M+ G
Sbjct: 947 LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 1006
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K+ GCSWI V + +IF A ++ H + I +L KL +M+ Y + L + ++
Sbjct: 1007 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDD 1066
Query: 509 EEK-MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EK M + GH SEK A+AFG++ +PPG +R++KN R+CGDCH KF+S RE+++R
Sbjct: 1067 MEKEMIQCGH-SEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLR 1125
Query: 568 DNNRFHRFWDGYCSCSD 584
D+NRFH F DG CSC D
Sbjct: 1126 DSNRFHHFKDGLCSCRD 1142
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 225/427 (52%), Gaps = 9/427 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ + N +TF C+ K +AL K++H LK G + V S Y K G
Sbjct: 461 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 520
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FDE+ E ++ +WN+ I+ V+ G N ++ FI + G E DL T + L A
Sbjct: 521 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 580
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ L LGR LHGF V++ F V N L+D Y KC + A VF + D VSW
Sbjct: 581 WANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 640
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S + YV+ + +F + +GV P + ++S++ ACA + L+ GR VH+ +K
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ V +AL++MY KCGS+++A + F+K+P +++V WN +IGGY+ + AL
Sbjct: 701 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALEL 760
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC-VVD 359
F +M + P+ +T+ CVL AC+ A++KG +I + L+ G H AC +VD
Sbjct: 761 FLDMQK---QFKPDDITMACVLPACAGLAALDKGREI-HGHILRRGYFSDL-HVACALVD 815
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV--YGKPELGRIAADNLFKLDPNDS 417
+ + GL+ A + +P + IS W ++ + +G + + ++P++S
Sbjct: 816 MYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES 874
Query: 418 GNHVLLS 424
V+L+
Sbjct: 875 SFSVILN 881
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 179/362 (49%), Gaps = 4/362 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H++ + +G D +G MY G K+FD++ + WN +S
Sbjct: 388 GKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 447
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + ++ F +++ G + TF L + ++ +++HG++++ GF N +V
Sbjct: 448 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV 507
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y K V A +FD + + + VSW SM+ V N NG ++F+ GV
Sbjct: 508 VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV 567
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E + SVL A A I L LGR++H VKAC + + L+DMY KCG++ A
Sbjct: 568 EVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE 627
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F KM + +V W + I Y +G A+ F+EM S P+ T+ ++ AC+ +
Sbjct: 628 VFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR--PDIYTVTSIVHACACS 685
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+++KG + +S +K G+ ++++ + G V+ A + ++P++ +S W
Sbjct: 686 SSLDKGRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS-WNT 743
Query: 389 LL 390
++
Sbjct: 744 MI 745
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 167/397 (42%), Gaps = 44/397 (11%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
NA I+ G +NAI+ + E L ++C+ L C++ L+ G+++H ++
Sbjct: 340 NAKINKFCEMGDLRNAIELLT--KSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
+G + ++ LV Y C ++ + +FD I++ W ++ Y + +
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F ++ GV + + VL A + ++ + VH +K N V ++L+ Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G ++ A F+++ E ++V WN++I G G + L F +M + E + TLV
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV--DLTTLV 575
Query: 320 CVLSACSRAGAVEKGM-------------KIFYSMTL-----KYGIKPGAEH-------- 353
VL A + G + G ++ +S TL K G GA
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 635
Query: 354 ----YACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAA 406
+ + R GL A + EM +RP I ++++AC + GR
Sbjct: 636 TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 695
Query: 407 DNLFKLDPNDSGNHV----LLSNMFAATGRWEEADLV 439
+ K N G+++ L NM+A G EEA LV
Sbjct: 696 SYVIK---NGMGSNLPVTNALINMYAKCGSVEEARLV 729
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D T C+ A + L G+++H L+ G D+ V C+ DMY+K GL A +
Sbjct: 770 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 829
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD +P+++L +W I+ + G AI F +R G EPD +F LNACS LL
Sbjct: 830 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLL 889
Query: 128 QLG 130
G
Sbjct: 890 NEG 892
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 350/658 (53%), Gaps = 85/658 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG----KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+ P+D++F L A H+P QLH LKSG + V + +Y K
Sbjct: 153 LRPDDYSFTALLSAGG--HLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210
Query: 62 D---DADKMFDEMPERNLATW-------------------------------NAYISNAV 87
+ DA K+ DEMP ++ TW NA IS V
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270
Query: 88 LGGRPKNAIDAFINLRRTGGEP---DLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGF 142
G A++AF RR E D TF + L+AC++ L G+ +HG ++R F
Sbjct: 271 HSGM---AVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327
Query: 143 --DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---------Y 191
+ + V N LV FY KC + +A+ +FD + K+ VSW ++L YV++ +
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 192 EE----------------------ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
EE E+ ++F R E V+P D+ + ++AC + L+
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALK 447
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G+ +H V+ EG+ G+AL+ MY +CG++++A + F MP + V WNA+I
Sbjct: 448 HGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALG 507
Query: 290 HQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
GH AL F+ M + E + P+ ++ + VL+AC+ +G V++G + F SM +GI
Sbjct: 508 QHGHGREALELFDRMVA---EGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGII 564
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
PG +HY ++DLLGRAG + A ++IK MP PT S+W A+L+ CR G ELG AAD
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQ 624
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
LFK+ P G ++LLSN ++A G W +A VRK M+D G+KK GCSWI N++H+F
Sbjct: 625 LFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLV 684
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGL 528
DT H E+ L + +M+ GY+PDT L+D+E +K + HSE++A+ FGL
Sbjct: 685 GDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGL 744
Query: 529 IAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ +PPG + + KNLRIC DCH+A F+S VGRE++VRD RFH F DG CSC +YW
Sbjct: 745 LNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 172/406 (42%), Gaps = 74/406 (18%)
Query: 64 ADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNA 120
A FD +P R+ NA IS A+ F +L +G PD +F A L+A
Sbjct: 107 AVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSA 166
Query: 121 CSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---AKVVFDGIIDK 175
+ + QLH +++SG G +SVCN LV Y KC A+ V D + +K
Sbjct: 167 GGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNK 226
Query: 176 NDVSWCSMLVVYVQN---------YEEENG-------------------CQMFLTARR-- 205
+D++W +M+V YV+ +EE +G + F RR
Sbjct: 227 DDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV 286
Query: 206 -EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA----CVEGNIFVGSALVDMYGKC 260
E V +F +SVLSACA + G+SVH ++ E + V +ALV Y KC
Sbjct: 287 LERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKC 346
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM---------------- 304
G+I A F+ M +++V WN I+ GY D A+ FEEM
Sbjct: 347 GNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406
Query: 305 ------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
MR E V P T ++AC GA++ G K + ++ G +
Sbjct: 407 HGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG-KQLHGHIVQLGFEGSN 465
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ + R G V A+ + MP ++S W A+++A +G
Sbjct: 466 SAGNALITMYARCGAVKEAHLMFLVMPNIDSVS-WNAMISALGQHG 510
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P D+T+ A L GKQLH ++ G G + MY++ G
Sbjct: 421 MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A MF MP + +WNA IS G + A++ F + G PD I+F L A
Sbjct: 481 VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK 166
C+ L+ G + + R G L+D G+ +G A+
Sbjct: 541 CNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/594 (39%), Positives = 328/594 (55%), Gaps = 35/594 (5%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT--WNAYI 83
P +Q+HA +K+ + + + T A ++F + ++ T WN+ +
Sbjct: 41 PFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCL 100
Query: 84 SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G P +AI F LR+ PD T + L AC + L GR LHG + + GF
Sbjct: 101 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV------------------------- 178
N+ + N +V Y C E+G A+++F+ + ++ V
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220
Query: 179 ------SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
SW SM+ YVQ + + +F GV+ + + +VL+ACA + L+LG
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 280
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H + + + N+ + + L+DMY KCG +++A F +M ER +V W+A+IGG A G
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A+ AL F +M+ + E PN VT + +L ACS G + +G + F SMT YGI P E
Sbjct: 341 RAEEALRLFSDMSQVGIE--PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIE 398
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C+VDLL RAGL+ A+E I MPM+P VWGALL ACRV+ E+ A +L +L
Sbjct: 399 HYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLEL 458
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
DP + G +V+LSN++A GRWE+ VRK MKD +KK G S I+V +H F A + S
Sbjct: 459 DPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEES 518
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H +I +L EEM+ GY+P+T+ L D+EE EK+ V HSEK+AL FGL+ P
Sbjct: 519 HPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTP 578
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLRIC DCHSAFK IS IV RE++VRD NRFH F D CSC DYW
Sbjct: 579 AETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 36/372 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R+ + P+ FT + +A L G+ LH + K G ++++ +Y+ G
Sbjct: 119 LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGE 178
Query: 61 KDDADKMFDEMPERNLATWN-------------------------------AYISNAVLG 89
+A +F++MP+R++ TWN + I+ V
Sbjct: 179 MGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQC 238
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+ K AI F + G + + +T A L AC+D L LG ++H + R GF NV +
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+D Y KC + A VF+ + ++ VSW +M+ + E ++F + G+E
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEI 268
P +L AC+ + + GR A + + I +VD+ + G + +A
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 269 AFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
MP + N V W A++G + +MA + + + + YV L + + R
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGR 478
Query: 328 ---AGAVEKGMK 336
V K MK
Sbjct: 479 WEDTARVRKFMK 490
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/543 (41%), Positives = 322/543 (59%), Gaps = 4/543 (0%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L ++S+ + G HA ++ G D +MYSK GL + A K+FDEMP R+
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCSLLQLGRQLH 134
L +WN + + G + A+ F+ +++ G T + + AC+ C + + +QLH
Sbjct: 113 LVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFEC-KQLH 171
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
GF +++ D NV V L+D Y KC V A +VF+ + +++DV+W SM+ YVQN E
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYE 231
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+F A+ G+E F ISS LSACA A L G+ V AV K + NIFV S+L+
Sbjct: 232 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLI 291
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
DMY KCG I++A I F+ + E+N+V WNA++ G++ + A+ FE+M M PN
Sbjct: 292 DMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGI--CPN 349
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
+T + VL+ACS G VEKG K F M + + P HY+C+VD+LGRAGL+ A ++I
Sbjct: 350 EITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLI 409
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
MP T S+WG+LL +CR+Y E +AA +LF+++P+++GNHVLLSN++AA RWE
Sbjct: 410 DRMPFDATASMWGSLLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWE 469
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
E R +K+ KK G SWI +K+++H F + +H R EI L L EMK G
Sbjct: 470 EVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIG 529
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y T L+DVEE K + HHSEK+AL FG++ +P G PIRI KNLRICGDCHS K
Sbjct: 530 YKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMK 589
Query: 555 FIS 557
S
Sbjct: 590 LAS 592
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 145/275 (52%), Gaps = 1/275 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E IS ++FT + A +A KQLH ALK+ +VFVG + D+Y+K GL
Sbjct: 139 MQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL 198
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F+ MPER+ TW++ ++ V + A+ F + G E + T + L+A
Sbjct: 199 VKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 258
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+Q+ L ++G N+ V + L+D Y KC + A +VF + +KN V W
Sbjct: 259 CAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLW 318
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML + ++ F ++ G+ P + SVL+AC+ + +E GR + ++
Sbjct: 319 NAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIR 378
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
V N+ S +VD+ G+ G + +A+ ++MP
Sbjct: 379 VHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMP 413
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ +L + AR G + HA ++ + + + L++MY KCG ++ A F++MP
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEK 333
R+LV WN ++G + G ++ AL F +M E + + T+ V+ AC+ V +
Sbjct: 110 VRSLVSWNTMVGSHTQNGDSEKALVLFMQMQK---EGISCSEFTVSSVVCACAAKCCVFE 166
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
K + LK + ++D+ + GLV A + + MP R ++ W +++
Sbjct: 167 -CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVT-WSSMV 221
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/588 (36%), Positives = 343/588 (58%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
M E + P+ +TF + KA S L + G++ H LA+ G ++ D FV + DMY+K
Sbjct: 92 MLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFD 151
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +F + E+++ + A I G A+ F ++ G +P+ T L
Sbjct: 152 KMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILI 211
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C + L G+ +HG +V+SG + V+ L+ Y +CN + + VF+ + N V+
Sbjct: 212 NCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVT 271
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S +V VQN EE +F R + P F +SS+L AC+ +A LE+G +HA+ +
Sbjct: 272 WTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITM 331
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++GN + G+AL+++YGKCG++ A F+ + E ++V N++I YA G AL
Sbjct: 332 KLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALE 391
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE + +M VPN VT + +L AC+ AG VE+G +IF S+ + I+ +H+ C++D
Sbjct: 392 LFERLKNMGL--VPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMID 449
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+ ++ A +I+E+ P + +W LLN+C+++G+ E+ + +L P D G
Sbjct: 450 LLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGT 508
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
H+LL+N++A+ G+W + ++ ++D+ +KK SW+ V +H F A D SH R+ EI
Sbjct: 509 HILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEI 568
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI-AIPPGVPIR 538
ML L +++K GY P+T F L D++EE+K++ + +HSEK+A+A+ L I IR
Sbjct: 569 FEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIR 628
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCHS KF+S + GR++I RD+ RFH F G CSC DYW
Sbjct: 629 IFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 200/371 (53%), Gaps = 12/371 (3%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
+ L S+ T + +H +KSG + F+G D Y K G +A K+FDE+P
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELP 62
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
R++ TWN+ IS+ + G+ K A++ + N+ G PD TF A A S L++ G++
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122
Query: 133 LHGFLVRSG---FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
HG V G DG V+ + LVD Y K +++ A +VF +++K+ V + +++V Y Q
Sbjct: 123 AHGLAVVLGLEVLDGFVA--SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ 180
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + ++F GV+P ++ ++ +L C + L G+ +H + VK+ +E +
Sbjct: 181 HGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
++L+ MY +C I+D+ FN++ N V W + + G G ++A+S F EM +RC
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREM--IRC 298
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN TL +L ACS +E G +I +++T+K G+ A +++L G+ G +D+
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQI-HAITMKLGLDGNKYAGAALINLYGKCGNMDK 357
Query: 370 A---YEIIKEM 377
A ++++ E+
Sbjct: 358 ARSVFDVLTEL 368
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 316/536 (58%), Gaps = 6/536 (1%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLI 112
MY+K GL D K+FDEM ++L W A I+ +P+ A+ F +++ G D I
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ +A ++ +HG+ R + V N ++ + KC A++VFD +
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++++ +SW SML Y QN + +F R +P ++SACA + LGR
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAH 290
H V + +E + + +AL+DMY KCG ++ A FN +P ERN WN +I GY
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
GH AL F M E PN+ T +LSACS AG +++G K F M + +
Sbjct: 241 HGHGKEALELFSRMQEEGVE--PNHFTFTSILSACSHAGLIDEGRKCFAEMK-RLSVTLE 297
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+H+ACVVD+LGRAGL+ A+++IKEMP P+ VWGALL AC+++G ELG+ AA NL
Sbjct: 298 DKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLL 357
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+L+PN +G +VL+SN++AA+ +W+E +R++MK+ G+KK A S I I F D
Sbjct: 358 QLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTAD 417
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
+ E+ + L EMK AGY+PD + AL+DVEEE+K + +HSEK+A+AFG++
Sbjct: 418 QENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLK 477
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I PG+ IR+TKNLR+C DCHSAFK+IS I R++IVRD NRFH F G CSC DYW
Sbjct: 478 IDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 6/323 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H A + I ++ VG S M++K G + A +FD M ER++ +WN+ +S G+
Sbjct: 81 VHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQ 140
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
A+ F +R + +P +T ++AC+ LGR+ H F+V S + + ++ N
Sbjct: 141 ATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNA 200
Query: 152 LVDFYGKCNEVGLAKVVFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+D Y KC ++ A +F+GI ++N SW ++ Y + + ++F + EGVE
Sbjct: 201 LMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVE 260
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P F +S+LSAC+ ++ GR A + V + +VDM G+ G +Q+A
Sbjct: 261 PNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDL 320
Query: 270 FNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
+MP + W A++ G+ ++ ++ + + YV + + +A ++
Sbjct: 321 IKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKW 380
Query: 329 GAVEKGMKIFYSMTLKYGIKPGA 351
V K + + LK KP A
Sbjct: 381 KEVWKLRQDMKNKGLK---KPAA 400
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR P T + A + L G++ H + S D + + DMY+K G
Sbjct: 151 MRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGD 210
Query: 61 KDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+ A +F+ +P ERN +WN IS + G K A++ F ++ G EP+ TF + L
Sbjct: 211 LEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSIL 270
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID---- 174
+ACS L+ GR+ + R +VD G+ GL + FD I +
Sbjct: 271 SACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGR---AGLLQEAFDLIKEMPSP 327
Query: 175 KNDVSWCSMLV 185
+D W ++L+
Sbjct: 328 PSDGVWGALLL 338
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/587 (38%), Positives = 331/587 (56%), Gaps = 40/587 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P ++ +A S L GKQ+H + + + FV + DMY+K G
Sbjct: 146 MQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGD 205
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD M ++N+ +WN IS V G P I F ++ +G +PDL+T LNA
Sbjct: 206 IDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA 265
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
Y +C V A+ +F + K+++ W
Sbjct: 266 -----------------------------------YFRCGRVDDARNLFIKLPKKDEICW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y QN EE+ +F R V+P + ISS++S+CA++A L G+ VH V
Sbjct: 291 TTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVV 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++ V SALVDMY KCG DA + F MP RN++ WNA+I GYA G AL+
Sbjct: 351 MGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+E M + P+ +T V VLSAC A V++G K F S++ ++GI P +HYAC++ L
Sbjct: 411 YERMQQENFK--PDNITFVGVLSACINADMVKEGQKYFDSIS-EHGIAPTLDHYACMITL 467
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G VD+A ++I+ MP P +W LL+ C G + +AA +LF+LDP ++G +
Sbjct: 468 LGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPY 526
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
++LSN++AA GRW++ +VR MK+ KK A SW+ V N++H F ++D H +I
Sbjct: 527 IMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIY 586
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV-PIRI 539
L +L ++ GY PDTN L++V EEEK + +HSEK+ALAF LI P GV PIRI
Sbjct: 587 GELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRI 646
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+R+C DCH KF S + R +I+RD+NRFH F+ G CSC+D W
Sbjct: 647 IKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 164/347 (47%), Gaps = 39/347 (11%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV+ + Y+K G+ ++ +FD+MP R+ ++N I+ G A+ + ++
Sbjct: 88 DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
G +P + L ACS L+ G+Q+HG +V + N V N + D Y KC ++
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+++FDG+IDKN VSW M+ YV+ +F + G++P +S+VL+A
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA-- 265
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
Y +CG + DA F K+P+++ +CW
Sbjct: 266 ---------------------------------YFRCGRVDDARNLFIKLPKKDEICWTT 292
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I GYA G + A F +M +R P+ T+ ++S+C++ ++ G ++ + +
Sbjct: 293 MIVGYAQNGREEDAWMLFGDM--LRRNVKPDSYTISSMVSSCAKLASLYHG-QVVHGKVV 349
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
GI + +VD+ + G+ A I + MP+R I+ W A++
Sbjct: 350 VMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVIT-WNAMI 395
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 209 EPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+PKD F+ + +L A+ L ++V K +++ + L+ Y K G +++
Sbjct: 54 QPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKR----DVYSWNTLLSAYAKMGMVENLH 109
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ F++MP R+ V +N +I +A GH+ AL M + P + V L ACS+
Sbjct: 110 VVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQ--PTQYSHVNALQACSQ 167
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ G +I + + + + D+ + G +D+A + M + +S W
Sbjct: 168 LLDLRHGKQIHGRIVVA-DLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVS-WN 225
Query: 388 ALLNACRVYGKP 399
+++ G P
Sbjct: 226 LMISGYVKMGNP 237
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/610 (37%), Positives = 335/610 (54%), Gaps = 39/610 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
P+ +TFP L K+ + I G+Q+H LK G D++V S MY++ G +DA
Sbjct: 87 PDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKV 146
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
K+FDE+P +++ +WNA IS V G K A+
Sbjct: 147 FDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEAL 206
Query: 97 DAFINLRR-TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
+ F + T PD T ++AC+ ++LGR +H ++ GF N+ + N L+D
Sbjct: 207 ELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDL 266
Query: 156 YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
Y K EV A +FDG+ +K+ +SW +++ Y + +F R G P D +
Sbjct: 267 YSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 326
Query: 216 SSVLSACARIAGLELGRSVHAV---AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
S+L ACA + +++GR +H +K V + ++L+DMY KCG I A+ F+
Sbjct: 327 LSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDS 386
Query: 273 -MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
M R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G +
Sbjct: 387 SMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE--PDDITFVGLLSACSHSGML 444
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G IF SMT Y I P EHY C++DLLG +GL A E+I MPM P +W +LL
Sbjct: 445 DLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 504
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
AC+++G ELG A L K++P +SG++VLLSN++AA GRW E +R + D G+KK
Sbjct: 505 ACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKK 564
Query: 452 A-GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS I + + +H F D H +N EI ML ++ ++ AG++PDT+ L ++EEE
Sbjct: 565 VPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEW 624
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
+ + HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD
Sbjct: 625 REGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRT 684
Query: 571 RFHRFWDGYC 580
RF F DG C
Sbjct: 685 RFXHFRDGVC 694
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 191/407 (46%), Gaps = 41/407 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKMFDEMPERNLATWNAYISN 85
+ +HA +K+G +H+ S + D A +FD + E NL WN
Sbjct: 5 RXIHAQMIKTG-LHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L P +A+ ++ + G PD TF L +C+ + + G+Q+HG +++ GFD +
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFD--------------------GIID----------- 174
+ V L+ Y + + A+ VFD G I+
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRS 233
K+ VSW +M+ YV+ + ++F V P + + +V+SACA+ +ELGR
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH+ N+ + +AL+D+Y K G ++ A F+ + ++++ WN +IGGY H
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPGA 351
AL F+EM +R PN VT++ +L AC+ GA++ G + ++ + LK + +
Sbjct: 304 YKEALLLFQEM--LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
++D+ + G +D A ++ ++S W A+++ ++G+
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGR 408
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 6/339 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P++ T + A + G+ +H+ G ++ + + D+YSK G
Sbjct: 213 MMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGE 272
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++FD + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 273 VETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 332
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNV-SVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C+ + +GR +H ++ + G NV S+ L+D Y KC ++ A+ VFD +
Sbjct: 333 CAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRS 392
Query: 178 VS-WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+S W +M+ + + +F R G+EP D +LSAC+ L+LGR++
Sbjct: 393 LSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR 452
Query: 237 VAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
+ + + ++D+ G G ++AE N MP E + V W +++ G+
Sbjct: 453 SMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNL 512
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++ S +++ + +YV L + +A R V K
Sbjct: 513 ELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAK 551
>gi|357135729|ref|XP_003569461.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Brachypodium distachyon]
Length = 595
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/577 (38%), Positives = 328/577 (56%), Gaps = 14/577 (2%)
Query: 20 SSALHIPVTGKQLHALALKSGQIHDV-----FVGCSAFDMYSKTGLKDDADKMF-DEMPE 73
S+A +P G+QLH LK G + + + Y++ L + + F D
Sbjct: 23 SAARALP-KGQQLHGFLLKGGHLPAIASSHALLSHHLLTFYARCALPELCLRAFLDLPAP 81
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITFCAFLNACSDCSLLQLG 130
A W++ IS+ G P A DAF + G + + + + A +D L
Sbjct: 82 PPAAAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPSAAKAVAAAADSLRPPLA 141
Query: 131 -RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
LHG ++ F +V V + ++D Y KC + A+ +FD + ++N VSW +++ Y
Sbjct: 142 PHALHGLASKTPFAEDVFVGSAVLDMYAKCGNLLDARRLFDEMPERNVVSWSALIGGYAD 201
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+F +A E VE DF +S ++ CA +LG VHA ++K ++ + FV
Sbjct: 202 AGMHPAALWIFRSALEEAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKTALDASPFV 261
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
GS+LV +Y KCG + A F+ PERNL WNA++ A GH A F EM +
Sbjct: 262 GSSLVSLYSKCGLVDRAYRIFSAAPERNLGIWNAVLNASAQHGHTATAFERFMEMQNDGF 321
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PNY+T +C+L+ACS AG V++G K ++S+ +Y I+P AEHYA +VDLLGR G +
Sbjct: 322 R--PNYITFLCLLTACSHAGLVDEG-KRYFSLMKEYTIEPQAEHYAAMVDLLGRVGRITE 378
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A E+I+ MPM P SVWGALL ACR++ + IAA LF+ SG H+LLS+ +AA
Sbjct: 379 ALELIESMPMEPPESVWGALLMACRMFKDADTAAIAAKRLFQTGSRSSGAHMLLSSTYAA 438
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
GR +A L RK M+D G++K G SW+ +H F + H R+ EI +L K+ E+
Sbjct: 439 AGRHVDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSDEIYNVLEKVGEK 498
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
M+ AGY+ DT+ + DV EEK +G+HSE++A+ GL+ +P GVPIR+ KNLR+C DC
Sbjct: 499 MEGAGYVADTSAVVKDVAREEKCETLGYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDC 558
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H+A K++S GR VI+RDN RFHRF DG CSC D+W
Sbjct: 559 HNAIKYLSKCTGRVVILRDNRRFHRFEDGLCSCGDFW 595
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT C+ + + + G Q+HA ++K+ FVG S +YSK GL D
Sbjct: 218 EAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKTALDASPFVGSSLVSLYSKCGLVDR 277
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F PERNL WNA ++ + G A + F+ ++ G P+ ITF L ACS
Sbjct: 278 AYRIFSAAPERNLGIWNAVLNASAQHGHTATAFERFMEMQNDGFRPNYITFLCLLTACSH 337
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + + +VD G+ + A + + + ++ + W +
Sbjct: 338 AGLVDEGKRYFSLMKEYTIEPQAEHYAAMVDLLGRVGRITEALELIESMPMEPPESVWGA 397
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+L+ C+MF A + K + S+ A +
Sbjct: 398 LLM----------ACRMFKDADTAAIAAKRLFQTGSRSSGAHM 430
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 328/587 (55%), Gaps = 3/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + F KA L + K H+LA+K D +V + ++Y++ G
Sbjct: 104 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGS 163
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A K+F+E+P +N W I + + F +RR+G E D + A
Sbjct: 164 LEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQA 223
Query: 121 CSDCSLLQLGRQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C + + G+ HG ++ F D N + LVD Y KC + A +F+ I ++ V
Sbjct: 224 CGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVV 283
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ + +N MF + V P +S++ AC+ + L+ GRSVH +
Sbjct: 284 WSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI 343
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ VE ++ ++ +DMY KCG I A F ++PE+N+ W+ +I G+ G AL+
Sbjct: 344 RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALN 403
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F EM S+ +PN VT V VLSACS +G +E+G F SM+ YGI P EHYAC+VD
Sbjct: 404 LFYEMRSV--NQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVD 461
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG +D A I MP P S WGALL ACR++ + EL A L L+ + SG
Sbjct: 462 LLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGV 521
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V+LSN++A G WE R +M + GI K G + I ++ ++++F ++D +NT+I
Sbjct: 522 YVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQI 581
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+++ L+E M+ GY+PD F L+DV++E K + HSEK+A+ FGL+ G+PIRI
Sbjct: 582 ESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRI 641
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
TKN+R+CGDCH+A KFIS I R++I+RD RFH DG CSC DYW
Sbjct: 642 TKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 20/445 (4%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T LF+ + L + QL+A L + + G F Y + G A K F+ +
Sbjct: 17 TLLSLFRFTKTL---ASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHI 73
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
NL +WN +++ + + F + + G D + AC SL Q +
Sbjct: 74 TFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAK 133
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
H ++ +G+ V L++ Y + + A VF+ + KN V W M+ ++ N+
Sbjct: 134 LFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHL-NF 192
Query: 192 EEENGC-QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFV 249
EE G ++F RR G E F++ ++ AC + + G++ H + +K ++ N F+
Sbjct: 193 SEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFL 252
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
++LVDMY KCG + A F ++ R++V W+AII G+A G A ++S F +M +
Sbjct: 253 QTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQM--LAD 310
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN VT ++ ACS G++++G + + ++ G++ ++Y +D+ + G +
Sbjct: 311 SVTPNSVTFASIVLACSSLGSLKQGRSV-HGYMIRNGVELDVKNYTSFIDMYAKCGCIVT 369
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF--KLDPNDSGNHVLLSNMF 427
AY + ++P + S W ++N ++G A NLF N N V ++
Sbjct: 370 AYRVFCQIPEKNVFS-WSTMINGFGMHGLCA----EALNLFYEMRSVNQLPNSVTFVSVL 424
Query: 428 AA---TGRWEEADLVRKEM-KDVGI 448
+A +GR EE K M +D GI
Sbjct: 425 SACSHSGRIEEGWSHFKSMSRDYGI 449
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/525 (40%), Positives = 307/525 (58%), Gaps = 4/525 (0%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FDEM + WN + V G P A+ + +R G PD TF + AC++
Sbjct: 88 ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAE 147
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L G +HG +V+ G + +V L+ Y K E+G A+ +F +++++ V+W ++
Sbjct: 148 LAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNAL 207
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ V VQ Q F G++P I S LSAC + LE G ++ A + +
Sbjct: 208 IAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGI 267
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ NI V +A +DM KCG + A F++MP+RN++ W+ +IGGYA G ++ AL+ F
Sbjct: 268 DSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSR 327
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK--YGIKPGAEHYACVVDLL 361
M + + PNYVT + VLSACS G V +G + F M I+P EHYAC+VDLL
Sbjct: 328 MKNQGVQ--PNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLL 385
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GR+G ++ AY IK MP+ +WGALL AC ++ +LG+ AD LF+L P + HV
Sbjct: 386 GRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHV 445
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSNM+AA GRW + VR+ MK G +K A S + IHI D SH ++ I A
Sbjct: 446 LLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILA 505
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L L ++MK+ GYIP+T+ +DVE+EEK + + HSEK+A+AF LI P PIR+ K
Sbjct: 506 KLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMK 565
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLRICGDCH+ K +S I RE+I+RD NRFH F +G CSC D+W
Sbjct: 566 NLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 4/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ FTFP + KA + L G +H +K G V MY K G
Sbjct: 126 MRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGE 185
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M ER+L WNA I+ V G A+ +F + G +PD +T + L+A
Sbjct: 186 LGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSA 245
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+ G +++ F G D N+ V N +D KC ++ A +FD + +N +SW
Sbjct: 246 CGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISW 305
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y N E E +F + +GV+P +VLSAC+ + G +
Sbjct: 306 STVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQ 365
Query: 241 A---CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ ++ + +VD+ G+ G +++A MP E + W A++G A + +
Sbjct: 366 SDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKL 425
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ + + E +V L + +A R VEK
Sbjct: 426 GQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEK 462
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 314/542 (57%), Gaps = 7/542 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR 104
+F+ +MY K L +DA ++FD+MP+RN+ +W IS + A++ + + R
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
P++ T+ + L +C+ S + R LH +++ G + +V V + L+D + K E
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A VFD ++ + + W S++ + QN + ++F +R G + ++SVL AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+A LELG H VK + ++ + +ALVDMY KCGS++DA FN+M ER+++ W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G A G++ AL FE M S + PNY+T+V VL ACS AG +E G F SM
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTK--PNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
YGI P EHY C++DLLG+AG +D A +++ EM P W LL ACRV L
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 448
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA + LDP D+G + LLSN++A + +W+ + +R M+D GIKK GCSWI V +IH
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F D SH + E+ L +L + GY+P+TNF L D+E E+ + HHSEK+AL
Sbjct: 509 AFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 568
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
AFGL+ +P IRI KNLRICGDCH K S + R +++R R+H F DG CSC D
Sbjct: 569 AFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGD 628
Query: 585 YW 586
YW
Sbjct: 629 YW 630
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 163/338 (48%), Gaps = 13/338 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + PN +T+ + ++ + + + LH +K G DVFV + D+++K G
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FDEM + WN+ I R A++ F ++R G + T + L A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +LL+LG Q H +V+ +D ++ + N LVD Y KC + A VF+ + +++ ++W
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG----RSVHA 236
+M+ QN + ++F + G +P I VL AC+ LE G RS+
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ V + ++D+ GK G + DA N+M E + V W ++G Q +
Sbjct: 388 LYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV 444
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+A + +++ ++ E Y L + + + +VE+
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 9/297 (3%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ A +L+ G D T+ + C + G + L +G + + N L++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y K N + A +FD + +N +SW +M+ Y + + ++ + R+ V P +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SSVL +C G+ R +H +K +E ++FV SAL+D++ K G +DA F++M
Sbjct: 165 YSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+ + WN+IIGG+A +D+AL F+ M R + TL VL AC+ +E G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMK--RAGFIAEQATLTSVLRACTGLALLELG 279
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
M+ + +KY + +VD+ + G ++ A + +M R I+ W +++
Sbjct: 280 MQAHVHI-VKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKERDVIT-WSTMIS 332
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 333/588 (56%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
M E + P+ +TF +FKA S + + G++ H LA+ G ++ D FV DMY+K G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +FD + ++++ + A I G A++ F ++ + +P+ T + L
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+C + L G+ +HG +V+SG + V+ L+ Y KCN V + VF+ + + V+
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S +V VQN EE MF R + P F SS+L AC+ +A LE G +HAV V
Sbjct: 272 WTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTV 331
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K V+GN +V +AL+ +YGKCG+++ A F + E ++V N +I YA G AL
Sbjct: 332 KLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALE 391
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE M + + PN VT + +L AC+ AG VE+G +IF + + I+ +HY C++D
Sbjct: 392 LFERMKKLGHK--PNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMID 449
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRA + A +I+E P + W LLNAC+++G+ E+ + P D G
Sbjct: 450 LLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGT 508
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
H+LL+N++A+ G+W+ ++ +D+ +KK SW+ + +H F A D SH R EI
Sbjct: 509 HILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI-PPGVPIR 538
ML +L E++ GY PDT F L D+EEE+K++ + +HSEK+A+AF L IR
Sbjct: 569 SEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIR 628
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCHS KF+S + GR++I RD RFH F G CSC DYW
Sbjct: 629 IFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 193/360 (53%), Gaps = 5/360 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
T K LH LKSG + F G D Y K + +A K+FDEMP R++ TWN+ IS+
Sbjct: 18 TTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSH 76
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GN 145
V G+ K AI+ + N+ G PD TF A A S+ + + G++ HG V GF+ +
Sbjct: 77 VSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSD 136
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V G+VD Y K ++ A+ VFD ++DK+ V + +++V Y Q + ++F
Sbjct: 137 GFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVG 196
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
++P ++ ++SVL +C + L G+ +H + VK+ +E + ++L+ MY KC ++D
Sbjct: 197 SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVED 256
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ FN + + V W + I G G ++ALS F EM +RC PN+ T +L AC
Sbjct: 257 SIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREM--IRCSISPNHFTFSSILHAC 314
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S +E G +I +++T+K G+ A ++ L G+ G V++A + + + +S+
Sbjct: 315 SSLAMLEAGEQI-HAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSI 373
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/583 (37%), Positives = 334/583 (57%), Gaps = 4/583 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ +++T+P + A + L G++ H LK+G D+FV + Y G A
Sbjct: 107 VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCAC 166
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
+FDE R++ TWN I+ + G + A D + + PD +T + + AC+
Sbjct: 167 DVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQL 226
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L+ G+ LH + G D N+ V N ++D Y KC+++ A+ VF+ I +K+ +SW SML
Sbjct: 227 GNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSML 286
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
++ + +F + +E + + VLSACA+ L+ G+ +H + K +
Sbjct: 287 SGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEIN 346
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ + +ALVDMY KCGSI A F +M RN+ WNA+IGG A GH + A+S F++M
Sbjct: 347 CDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQM 406
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ +P+ VT + +L ACS AG V++G+ +F +M K+ I+P EHY CVVDLL RA
Sbjct: 407 EHDK--LMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 464
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
VD A I+ MP++ +W LL ACR G +L + +L+P+ G +V+LS
Sbjct: 465 RKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLS 524
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A +W+ A +RK+MK+ GI+K GCSWI + IH F A D SH + +I AM+
Sbjct: 525 NLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584
Query: 485 KLREEMKA-AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
++ + G++P T L+D+EEEEK + HSEK+A+A GLI+ P G PIRI KNL
Sbjct: 585 EMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNL 644
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+C DCHS K S + RE++ RD +RFH F +G CSC D+W
Sbjct: 645 RVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 199/392 (50%), Gaps = 9/392 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ HAL L++ +H+ +F S +G + A K+F +M + N I
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P A+ + + G D T+ L AC+ ++LGR+ H ++++GF ++
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARRE 206
V N L+ FY C G A VFD ++ V+W M+ ++ E + + +
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ P + + S++ ACA++ LE G+ +H+ + + ++ N+ V +A++DMY KC I+ A
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+ FN++ E++++ W +++ G A G+ AL+ F++M + E + +TLV VLSAC+
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIEL--DEITLVGVLSACA 325
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+ GA+++G K + + K+ I +VD+ + G +D A ++ + M +R + W
Sbjct: 326 QTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTW 383
Query: 387 GALLNACRVYGKPELGRIAADNLF--KLDPND 416
AL+ ++G E D + KL P+D
Sbjct: 384 NALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG--KCNEVGLAKVVFDGIIDKNDVS 179
+ C+ + +Q H L+R+ N + L+ F ++ A+ +F + + +
Sbjct: 19 THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+M+ Y ++ ++ GV ++ VL+ACAR+ ++LGR H +
Sbjct: 79 CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVL 138
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++FV +AL+ Y CGS A F++ R++V WN +I + ++G ++ A
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+EMT + P+ VT+V ++ AC++ G +E+G K +S + + G+ ++D
Sbjct: 199 LLDEMTKLD-NLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILD 256
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLN----------ACRVYGKPELGRIAADNL 409
+ + ++ A E+ + + +S W ++L+ A ++ K +L +I D +
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLS-WTSMLSGLAKSGYFQEALALFQKMQLNKIELDEI 315
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/574 (38%), Positives = 321/574 (55%), Gaps = 33/574 (5%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+V S ++ K G ++A K+F+EM +++L +W+A IS + A+ F +
Sbjct: 222 NVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMN 281
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG------ 157
G D + + L+ACS ++ G+ +HG +V+ G + V++ N L+ Y
Sbjct: 282 ANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVV 341
Query: 158 -------------------------KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
KC E+ A+ +FD + DK++VSW +M+ Y Q
Sbjct: 342 TAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDR 401
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+F + EG +P + ++ SV+SAC +A L+ G+ +HA K ++ NI +G+
Sbjct: 402 FTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTT 461
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L++MY K G ++DA F + E+ + WNA+I G A G D +L +F EM
Sbjct: 462 LINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG--VT 519
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN +T V VL AC G V++G + F SM ++ I P +HY C+VDLLGRAG++ A E
Sbjct: 520 PNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEE 579
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+I+ MPM P +S WGALL AC+ YG E G L +L P+ G +VLLSN++A+ G
Sbjct: 580 LIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGN 639
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W + VR M+ G+ K GCS I R+H F A D +H +N I+ ML ++ +++K
Sbjct: 640 WVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKL 699
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
GY PDT D++EEEK T + HSEK+A+AFGLIAI P PIRI KNLRIC DCH+A
Sbjct: 700 EGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTA 759
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K IS RE++VRD +RFH F G CSC DYW
Sbjct: 760 AKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P++ + A + L GK +HA K+G ++ +G + +MY K G
Sbjct: 412 MQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGC 471
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F + E+ ++TWNA I + G ++ F ++ G P+ ITF A L A
Sbjct: 472 VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGA 531
Query: 121 CSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C L+ G R + + N+ +VD G+ + A+ + + + DVS
Sbjct: 532 CRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVS 591
Query: 180 -WCSML 184
W ++L
Sbjct: 592 TWGALL 597
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/596 (39%), Positives = 336/596 (56%), Gaps = 14/596 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQ--LHALALKSGQIHDVFVGCSAFDMYSKT 58
M++E PN TF KA+ + G+ LH +G DV VG + MY T
Sbjct: 325 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 384
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G D A FD +P +N+ +WNA ++ GR + A++ F ++R P+ +++ A L
Sbjct: 385 GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 444
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C D S R +H +V +G F S+ NG+V + + + A FD + K+
Sbjct: 445 GCCEDVSE---ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDS 501
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW + + + F T + EG P F + SV+ CA + LELGRS+
Sbjct: 502 VSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQ 561
Query: 238 AVKAC-VEGNIFVGSALVDMYGKCGS-IQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGH 293
A VE ++ V SA+++M KCGS + + E F +MP+ ++LV WN +I YA GH
Sbjct: 562 LSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 621
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI-KPGAE 352
AL F M R P+ T V VLS CS AG VE G+ F+ GI + E
Sbjct: 622 GRKALKLFRIM-QQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE 680
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC+VD+LGR G + A + I++MP+ VW +LL AC YG E G AA +L
Sbjct: 681 HYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 740
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA-GCSWISVKNRIHIFQAKDT 471
+DS +V+LSN++AA GRWE++ VR++M + +KK A G S I VKNR+H F A+D
Sbjct: 741 YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDR 800
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH ++ EI A L +L+ ++ AGY+PDT L+DVEEE+K + +HSEK+A+AFGLI++
Sbjct: 801 SHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISV 860
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFW-DGYCSCSDYW 586
P IR+ KNLR+C DCH+A KFI+ + RE+ VRD NRFH F DG CSC DYW
Sbjct: 861 PHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 186/415 (44%), Gaps = 16/415 (3%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + PN +F + + + +HA + G + DV V + MY + G D+
Sbjct: 227 EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDE 286
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ +F+ M RN +WNA I+ G A + +++ G P+ ITF L A
Sbjct: 287 SIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 346
Query: 124 CSLLQLGRQ--LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S LG LHG++ +G +G+V V LV YG + A+ FD I KN VSW
Sbjct: 347 SSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWN 406
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-K 240
+ML Y N ++F +R+ + P +VL C ++ RS+HA V
Sbjct: 407 AMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHAEVVGN 463
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +V M+ + GS+++A AF+ ++ V WN + + + A+++
Sbjct: 464 GLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITA 523
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M+ E P+ TLV V+ C+ G +E G I ++ ++ + V++
Sbjct: 524 F---YTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMN 580
Query: 360 LLGRAG-LVDRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++ + G VD + MP R + W ++ A Y + GR A LF++
Sbjct: 581 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---YAQHGHGRKAL-KLFRI 631
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 167/377 (44%), Gaps = 21/377 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+QLH +K G + +G MYSK DDA+ F + R +ATWN I+
Sbjct: 43 GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQ-- 100
Query: 89 GGRPKNAIDAFINLR---RTGGEPDLITFCAFLNACSD------CSLLQLGRQLHGFLVR 139
P D + ++ R P+ +T A L A + S R +H +
Sbjct: 101 -SSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRG 159
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
S + ++ V L+D YGKC V A VF I + + W + ++ N E + +
Sbjct: 160 SDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPD--RA 217
Query: 200 FLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
L RR EG+ P ++LS+C + L L RS+HA + G++ V +ALV M
Sbjct: 218 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 277
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
YG+CGS+ ++ F M RN V WNA+I +A GH A + + M PN +
Sbjct: 278 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFR--PNKI 335
Query: 317 TLVCVL-SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
T V L +ACS + + G++ +V + G G +DRA
Sbjct: 336 TFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFD 395
Query: 376 EMPMRPTISVWGALLNA 392
+P + +S W A+L A
Sbjct: 396 AIPAKNIVS-WNAMLTA 411
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 16/301 (5%)
Query: 103 RRTGGEPDLI---TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
R T D I T L C + L GRQLH +V+ G N + N LV Y KC
Sbjct: 13 RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFLTARREGVEPKDFMISSV 218
+ A F + + +W +++ + +M L R E P I +V
Sbjct: 73 RSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAEN-RPNRLTIIAV 131
Query: 219 LSACAR------IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
L A A + R VH + +E ++FV +AL+D YGKCG ++ A F++
Sbjct: 132 LGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSR 191
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSRAGAV 331
+ +L+CWNA I A G+ + + + M E +PN + V +LS+C ++
Sbjct: 192 IQVPDLICWNAAIMACA--GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSL 249
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
I ++ + G +V + GR G VD + + + M +R +S W A++
Sbjct: 250 PLARSI-HARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS-WNAMIA 307
Query: 392 A 392
A
Sbjct: 308 A 308
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 16/188 (8%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ +L C A L GR +H VK + N +G+ LV MY KC S+ DA AF+ +
Sbjct: 27 LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALR 86
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM----RCEAVPNYVTLVCVLSACSRAG- 329
R + WN +I + + F+ T M R E PN +T++ VL A +
Sbjct: 87 SRGIATWNTLIAAQSSPA------AVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDP 140
Query: 330 ----AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +I + ++ ++D G+ G V+ A E+ + + P +
Sbjct: 141 SSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLIC 199
Query: 386 WGALLNAC 393
W A + AC
Sbjct: 200 WNAAIMAC 207
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/626 (37%), Positives = 339/626 (54%), Gaps = 60/626 (9%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLKDDADKMFDEMPE 73
L K ++ P KQLHA+ +K+GQI D F +S + D A +F +MPE
Sbjct: 22 LSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDI-DYARAVFRQMPE 80
Query: 74 RNLATWN------AYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
N WN A ++ L A + R +P+ TF + L AC+ S L
Sbjct: 81 PNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRV--KPNRFTFPSVLKACARASRL 138
Query: 128 QLGRQLHGFLVRSGF--------------------------------------------- 142
+ G+Q+HG +V+ GF
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKR 198
Query: 143 --DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
DGNV + N ++D + ++ AK +FD + ++ VSW M+ Y QN +F
Sbjct: 199 KQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLF 258
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ ++P + SVL A ARI LELG+ +H A K +E + +GSALVDMY KC
Sbjct: 259 QEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKC 318
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
GSI +A F +P+RN + W+AIIG +A G A+ A+ F M + PN V +
Sbjct: 319 GSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMG--KAGVTPNDVAYIG 376
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+LSACS AG VE+G F M G++P EHY C+VDLLGRAG ++ A E+I+ MP+
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
P +W ALL AC+++ ++G A+ L +L P+DSG++V LSN++A+ G WE VR
Sbjct: 437 PDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVR 496
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN 500
+MK + I+K GCSWI + IH F +D SH + EIQAML ++ ++++ GY P+T
Sbjct: 497 LKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Query: 501 FALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
+ +E+E+ + +HSEKIA+AFGLI+ P P++I KNLRIC DCH++ K IS I
Sbjct: 557 EVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIY 616
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
R++IVRD RFH+F G CSC DYW
Sbjct: 617 KRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA- 64
+ PN FTFP + KA + GKQ+H L +K G D FV + MY + +DA
Sbjct: 118 VKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAY 177
Query: 65 ------------------DK----------------------------MFDEMPERNLAT 78
DK +FDEMP+R++ +
Sbjct: 178 SLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVS 237
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN IS G AI+ F ++ + +P+ +T + L A + L+LG+ +H +
Sbjct: 238 WNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAG 297
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
++ + + + + LVD Y KC + A VF+ + +N ++W +++ + + E+
Sbjct: 298 KNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAII 357
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMY 257
F + GV P D +LSAC+ +E GRS + VK ++ I +VD+
Sbjct: 358 HFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLL 417
Query: 258 GKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
G+ G +++AE MP E + V W A++G + M E + + +YV
Sbjct: 418 GRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYV 477
Query: 317 TLVCVLS------ACSRAGAVEKGMKI 337
L + + A +R KGM I
Sbjct: 478 ALSNLYASLGNWEAVARVRLKMKGMDI 504
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN T + A + + GK +H A K+ D +G + DMYSK G
Sbjct: 261 MQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGS 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A ++F+ +P+RN TW+A I + GR ++AI F + + G P+ + + L+A
Sbjct: 321 IDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ GR +V+ G + +VD G+ + A+ + + I+ +DV
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440
Query: 179 SWCSML 184
W ++L
Sbjct: 441 IWKALL 446
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/587 (37%), Positives = 338/587 (57%), Gaps = 11/587 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD----VFVGCSAFDMYSKTGLKD 62
+PN T L + G+ +HA ++++ +HD V VG + DMY+K G
Sbjct: 226 APNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLV 285
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG---EPDLITFCAFLN 119
A ++F+ M RN TW+A + VL GR A F ++ G P + + L
Sbjct: 286 YASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVASALR 343
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC++ S L LG+QLH L +SG +++ N L+ Y K + A +FD ++ K+ VS
Sbjct: 344 ACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVS 403
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ +++ YVQN + + ++F + V+P + S++ AC+ +A L+ G+ H +
Sbjct: 404 YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI 463
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + +AL+DMY KCG I + F+ MP R++V WN +I GY G A +
Sbjct: 464 VRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATA 523
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M CE P+ VT +C++SACS +G V +G + F+ M KYGI P EHY +VD
Sbjct: 524 LFLDMKHQACE--PDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVD 581
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LL R G +D AY+ I+ MP++ + VWGALL ACRV+ +LG+ + + +L P +GN
Sbjct: 582 LLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGN 641
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
VLLSN+F+A GR++EA VR K+ G KK GCSWI + +H F D SH +++EI
Sbjct: 642 FVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEI 701
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L + ++ GY DT+F L DVEEEEK + +HSEK+A+AFG++ + I +
Sbjct: 702 YQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFV 761
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
TKNLR+CGDCH+ K+++ + R +IVRD NRFH F +G CSC D+W
Sbjct: 762 TKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 196/398 (49%), Gaps = 14/398 (3%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
PN++TFP + KA SAL + + +H A ++G D+FV + D+Y+K A
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAAT 185
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F MP R++ WNA ++ L G+ + I A + L + P+ T A L +
Sbjct: 186 VFRRMPARDVVAWNAMLAGYALHGKYSDTI-ACLLLMQDDHAPNASTLVALLPLLAQHGA 244
Query: 127 LQLGRQLHGFLVRS----GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
L GR +H + VR+ V V L+D Y KC + A VF+ + +N+V+W +
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSA 304
Query: 183 MLVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
++ +V +F +G + P ++S L ACA ++ L LG+ +HA+
Sbjct: 305 LVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS--VASALRACANLSDLCLGKQLHALLA 362
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ + ++ G++L+ MY K G I A F++M ++ V ++A++ GY G AD A
Sbjct: 363 KSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFR 422
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M + C P+ T+V ++ ACS A++ G K + + GI ++D
Sbjct: 423 VFRKMQA--CNVQPDVATMVSLIPACSHLAALQHG-KCGHGSVIVRGIASETSICNALID 479
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G +D + +I MP R +S W ++ ++G
Sbjct: 480 MYAKCGRIDLSRQIFDVMPARDIVS-WNTMIAGYGIHG 516
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 11/256 (4%)
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
C ++ LA+ +FD I + +++ Y RR +P ++ V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L AC+ + L R+VH A +A + ++FV +ALVD+Y KC S + A F +MP R++
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WNA++ GYA G ++ + M+ + PN TLV +L ++ GA+ +G +
Sbjct: 196 VAWNAMLAGYALHGKYSDTIAC---LLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVH 252
Query: 339 -YSMTL--KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
YS+ + K G ++D+ + G + A + + M +R ++ W AL+ +
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-WSALVGGFVL 311
Query: 396 YGKPELGRIAADNLFK 411
G+ + A +LFK
Sbjct: 312 CGR----MLEAFSLFK 323
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T L A S L GK H + G + + + DMY+K G D +
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSR 491
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD MP R++ +WN I+ + G K A F++++ EPD +TF ++ACS
Sbjct: 492 QIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSG 551
Query: 126 LLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS-WCSM 183
L+ G R H + G + G+VD + + A G+ K DV W ++
Sbjct: 552 LVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGAL 611
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKD--FMISSVLSACAR 224
L + + G Q+ ++ G E ++S++ SA R
Sbjct: 612 LGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGR 654
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/577 (39%), Positives = 327/577 (56%), Gaps = 8/577 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ + K + L +QLH+ LK G V + D YSK G DA +F
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 72 P-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
RN+ +W A IS + G A+ F +R P+ T+ A L A SL L
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA----SLSILP 419
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+H ++++ + V L+ Y K A +F I K+ V+W +ML + Q
Sbjct: 420 PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACA-RIAGLELGRSVHAVAVKACVEGNIFV 249
+ E +F +G++P +F ISSV+ ACA AG++ GR HA+++K I V
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
SALV MY + G+I A+I F + +R+LV WN++I GYA G++ A+ +F +M +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ + VT + V+ C+ G V +G + F SM + I P EHYAC+VDL RAG +D
Sbjct: 600 QM--DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDE 657
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+I++MP VW LL ACRV+ ELG+ +AD L L+P+DS +VLLSN++AA
Sbjct: 658 TMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAA 717
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
G+W+E D VRK M +KK AGCSWI +KN++H F A D SH + +I L +
Sbjct: 718 AGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITR 777
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+K GY P+T+F L+D+ E++K + HSE++ALAFGLIA PPG P++I KNLR+CGDC
Sbjct: 778 LKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDC 837
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H K +S I RE+I+RD +RFH F G CSC D+W
Sbjct: 838 HMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 198/399 (49%), Gaps = 10/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I PN FTF + A ++ G+++HA ++K G VFV S +MY+K GL
Sbjct: 192 MRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGL 251
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ M R++ +WN ++ L A+ F R T G+ T+ +
Sbjct: 252 VEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKL 311
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVS 179
C++ L L RQLH +++ GF +V L D Y KC E+ A +F +N VS
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ +QN + +F R + V P +F S++L A I L +HA +
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVI 427
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + FVG+AL+ Y K GS +DA F + ++++V W+A++ +A G + A
Sbjct: 428 KTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACS-RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F +M + PN T+ V+ AC+ + V++G + F+++++KY + +V
Sbjct: 488 LFNKMAIQGIK--PNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALV 544
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G +D A + + R +S W ++++ +G
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVS-WNSMISGYAQHG 582
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 180/398 (45%), Gaps = 22/398 (5%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD---VFVGCSAFDMYSKT 58
RR + + T C+ KA ++ V G+QLH L +K G HD V G S DMY K
Sbjct: 91 RRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG--HDRGEVSAGTSLVDMYMKC 148
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G + ++F+ MP++N+ TW + ++ + F +R G P+ TF + L
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+A + L LG+++H V+ G +V VCN L++ Y KC V AK VF+ + ++ V
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMV 268
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +++ N E Q+F +R + ++V+ CA + L L R +H+
Sbjct: 269 SWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCV 328
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+K V +AL D Y KCG + DA F+ RN+V W AII G G +A
Sbjct: 329 LKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F M R +PN T +L A + I IK +H V
Sbjct: 389 VVLFSRMREDR--VMPNEFTYSAMLKA---------SLSILPPQIHAQVIKTNYQHIPFV 437
Query: 358 VDLL----GRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
L + G + A I K + + ++ W A+L+
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVA-WSAMLS 474
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 146/328 (44%), Gaps = 5/328 (1%)
Query: 68 FDEMPERNLAT-WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
DE+P R+ A N + + G +D F RR G D T L AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 127 LQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LG QLH V+ G D G VS LVD Y KC V VF+G+ KN V+W S+L
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+F R EG+ P F +SVLSA A L+LG+ VHA +VK
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++FV ++L++MY KCG ++DA+ FN M R++V WN ++ G AL F E
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + + V L A + A+ + + +S LK+G + D + G
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQL---HSCVLKHGFHLTGNVMTALADAYSKCG 351
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNAC 393
+ A I + W A+++ C
Sbjct: 352 ELADALNIFSMTTGSRNVVSWTAIISGC 379
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 330/612 (53%), Gaps = 41/612 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ-IHDVFVGCSAFDMYSKTG 59
M + + PN T + A S L + GK++HA L + I + FVGC+ DMY
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCK 337
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAFL 118
+ +FD M R +A WNA I+ V AI+ F+ + G P+ +T + L
Sbjct: 338 QPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVL 397
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC C +H +V+ GF+ + V N L+D Y + + +A+ +F + K+ V
Sbjct: 398 PACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIV 457
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVE------------------PKDFMISSVLS 220
SW +M+ YV ++ + +R E P + +VL
Sbjct: 458 SWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLP 517
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
CA +A L G+ +HA AVK + ++ VGSALVDMY KCG + + F +M RN++
Sbjct: 518 GCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVIT 577
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSM---RCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
WN +I Y G + AL F M E PN VT + + ++ S +G V++G+ +
Sbjct: 578 WNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNL 637
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR-PTISVWGALLNACRVY 396
FY+M K+GI+P ++HYAC+VDLLGR+G ++ AY +IK MP + W +LL AC+++
Sbjct: 638 FYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH 697
Query: 397 GKPELGRIAADNLFKLDPN--DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
E+G IAA NLF LDPN D G + ++ ++MK+ G++K GC
Sbjct: 698 QNLEIGEIAAKNLFVLDPNVLDYGT---------------KQSMLGRKMKEKGVRKEPGC 742
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI + +H F A D SH ++ E+ L L MK GY+PDT+ L++V EEEK T
Sbjct: 743 SWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETM 802
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSE++A+AFGL+ PG IR+ KNLR+C DCH A KFIS IV RE+I+RD RFH
Sbjct: 803 LCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHH 862
Query: 575 FWDGYCSCSDYW 586
F +G CSC DYW
Sbjct: 863 FRNGTCSCGDYW 874
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 188/395 (47%), Gaps = 6/395 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++F FP + KA++ + GKQLHA K GQ V S +MY K G D A
Sbjct: 81 VPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAAR 140
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC- 124
++FDE+ R+ +WN+ I+ A + A+ F + P T + +ACS+
Sbjct: 141 RVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLI 200
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ L LG+Q+H F++R+G D N LV Y K V AK +FD DK+ VSW +++
Sbjct: 201 NGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTII 259
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACV 243
QN E + GV P ++SVL AC+ + L G+ +HA V + +
Sbjct: 260 SSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDL 319
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
N FVG ALVDMY C + + F+ M R + WNA+I GY A+ F E
Sbjct: 320 IENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVE 379
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M PN VTL VL AC R + I +S +K+G + ++D+ R
Sbjct: 380 MV-FELGLSPNSVTLSSVLPACVRCESFLDKEGI-HSCVVKWGFEKDKYVQNALMDMYSR 437
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
G ++ A I M + +S W ++ V G+
Sbjct: 438 MGRIEIARSIFGSMNRKDIVS-WNTMITGYVVCGR 471
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 144/298 (48%), Gaps = 5/298 (1%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
AI + N+ G PD F A L A + L LG+QLH + + G +V N LV
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+ YGKC ++ A+ VFD I +++DVSW SM+ + E E +F E V P F
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 214 MISSVLSACAR-IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ SV AC+ I GL LG+ VHA ++ + F +ALV MY K G + +A+ F+
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+++LV WN II + + AL M ++ PN VTL VL ACS +
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVM--LQSGVRPNGVTLASVLPACSHLEMLG 304
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G +I + + + + +VD+ ++ + M R TI+VW A++
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTIAVWNAMI 361
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 318/557 (57%), Gaps = 2/557 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+Q+HA +G ++ V MY + G +DA ++FD M +R+ +W+ +
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G + F L R+G D + + AC D L+ GR +H ++ G D VC
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y +C V A +F + ++ +W M+ ++ F R +G+
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + +V+ ACA++ + +++HA ++ +G+A++DMY KCGS++ A
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M RN++ W+A+I Y + G + AL F M +R +PN +T V +L ACS AG
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMM--LRSGILPNRITFVSLLYACSHAG 367
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E+G + F SM +YG+ P +HY C+VDLLGRAG +D A E+I+ MP+ +WGAL
Sbjct: 368 LIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGAL 427
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++ +L A +L KL G++VLLSN++A G+WE+ R M G++
Sbjct: 428 LGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLR 487
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G +WI V +++ F D +H R+ EI ML +L E+++ AGY PDTN LYDV+EE
Sbjct: 488 KIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEE 547
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
K + HSEK+A+AFGL+ +P G PIRITKNLR+CGDCH+ KF+S I + +IVRD
Sbjct: 548 VKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDA 607
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F +G CSC DYW
Sbjct: 608 KRFHHFKEGVCSCRDYW 624
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+D++ P + +A L G+ +H + LK G + FV + DMY++ + +DA ++F
Sbjct: 150 DDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIF 209
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+M +R+LATW I G P ++ F +R G PD + + AC+ +
Sbjct: 210 VKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMN 269
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
+ +H ++ +G+ +V + ++D Y KC V A+ +FD + +N ++W +M+ Y
Sbjct: 270 KAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYG 329
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNI 247
+ + E ++F R G+ P S+L AC+ +E G R ++ + V ++
Sbjct: 330 YHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDV 389
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ +VD+ G+ G + +A MP E++ V W A++G H D+A +
Sbjct: 390 KHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLK 449
Query: 307 MRCEAVPNYVTL 318
++ + +YV L
Sbjct: 450 LQSQKPGHYVLL 461
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 18/291 (6%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
F ++ C L RQ+H + +G N++V N L+ Y + + A+ +FDG+ ++
Sbjct: 56 FRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRH 115
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW ++ Y + + MF R G D+ V+ AC + L+ GR +H
Sbjct: 116 PYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHC 175
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ +K ++ FV + LVDMY +C ++DA F KM +R+L W +IG A G
Sbjct: 176 ITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVE 235
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-------YSMTLKYGIKP 349
+L F+ M + VP+ V LV V+ AC++ GA+ K I YS+ + G
Sbjct: 236 SLVFFDRMRNQ--GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILG--- 290
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G V+ A I M +R I+ W A++ A +G+ E
Sbjct: 291 -----TAMIDMYAKCGSVESARWIFDRMQVRNVIT-WSAMIAAYGYHGQGE 335
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + I P+ + A + L K +HA +G DV +G + DMY+K G
Sbjct: 243 MRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGS 302
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD M RN+ TW+A I+ G+ + A++ F + R+G P+ ITF + L A
Sbjct: 303 VESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYA 362
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G++ + G +V +VD G+ + A + +G+ ++K++V
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422
Query: 179 SWCSML 184
W ++L
Sbjct: 423 LWGALL 428
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 330/558 (59%), Gaps = 3/558 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH +LK +++ V + Y+K G A ++F + + + +WNA I
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ ++DA + ++ +G PD T C+ L+ACS L+LG+++HGF++R+ + ++ V
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++ Y C E+ + +FD + DK+ VSW +++ Y+QN + +F G++
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ V AC+ + L LGR HA A+K +E + F+ +L+DMY K GSI +
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
FN + E++ WNA+I GY G A A+ FEEM R P+ +T + VL+AC+ +G
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ--RTGHNPDDLTFLGVLTACNHSG 712
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII-KEMPMRPTISVWGA 388
+ +G++ M +G+KP +HYACV+D+LGRAG +D+A ++ +EM + +W +
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 772
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL++CR++ E+G A LF+L+P N+VLLSN++A G+WE+ VR+ M ++ +
Sbjct: 773 LLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+K AGCSWI + ++ F + + EI+++ + L ++ GY PDT +D+ E
Sbjct: 833 RKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSE 892
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK+ ++ HSEK+AL +GLI G IR+ KNLRIC DCH+A K IS ++ RE++VRD
Sbjct: 893 EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRD 952
Query: 569 NNRFHRFWDGYCSCSDYW 586
N RFH F +G CSC DYW
Sbjct: 953 NKRFHHFKNGVCSCGDYW 970
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 165/336 (49%), Gaps = 8/336 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FT+PC+ KA + + G +H L +K+G + DVFVG + Y G DA ++
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----PDLITFCAFLNACSD 123
FD MPERNL +WN+ I G + + + G+ PD+ T L C+
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ LG+ +HG+ V+ D + + N L+D Y KC + A+++F +KN VSW +M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 184 LVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+ + + + + A E V+ + I + + C + L + +H ++K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
N V +A V Y KCGS+ A+ F+ + + + WNA+IGG+A ++L +
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+M +P+ T+ +LSACS+ ++ G ++
Sbjct: 485 LQMKI--SGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 8/372 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H A+K ++ + + DMYSK G +A +F +N+ +WN +
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 89 GGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G D + GGE D +T + C S L ++LH + ++ F N
Sbjct: 371 EGDTHGTFDVLRQML-AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N V Y KC + A+ VF GI K SW +++ + Q+ + L +
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G+ P F + S+LSAC+++ L LG+ VH ++ +E ++FV +++ +Y CG +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ M +++LV WN +I GY G D AL F +M + ++++ V AC
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG--ISMMPVFGAC 607
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S ++ G + ++ LK+ ++ A ++D+ + G + ++ ++ + + T S
Sbjct: 608 SLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS- 665
Query: 386 WGALLNACRVYG 397
W A++ ++G
Sbjct: 666 WNAMIMGYGIHG 677
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 6/316 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPER 74
L +AS G+++H L S ++ + V C+ MY+ G DD+ +FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQL 133
NL WNA IS+ ++ FI + T PD T+ + AC+ S + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN-YE 192
HG +V++G +V V N LV FYG V A +FD + ++N VSW SM+ V+ N +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 193 EENGCQMFLTARREG---VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
EE+ + G P + +VL CAR + LG+ VH AVK ++ + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+AL+DMY KCG I +A++ F +N+V WN ++GG++ +G +M +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 310 EAVPNYVTLVCVLSAC 325
+ + VT++ + C
Sbjct: 390 DVKADEVTILNAVPVC 405
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 3/347 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ FT L A S L GK++H +++ D+FV S +Y G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+FD M +++L +WN I+ + G P A+ F + G + I+ A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+LGR+ H + ++ + + + L+D Y K + + VF+G+ +K+ SW
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M++ Y + + ++F +R G P D VL+AC + G R + +
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA--EIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ N+ + ++DM G+ G + A +A E ++ W +++ + +M
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 786
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + E NYV L + + + V K + M+L+
Sbjct: 787 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 833
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 143/308 (46%), Gaps = 20/308 (6%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV- 148
G +++ DAF+ +R G L A +++GR++H + S N V
Sbjct: 71 GDDESSSDAFLLVREALG--------LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEE--ENGCQMFLTAR 204
C ++ Y C ++ VFD + KN W +++ Y +N Y+E E +M T
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT- 181
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ P F V+ ACA ++ + +G +VH + VK + ++FVG+ALV YG G +
Sbjct: 182 --DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA--VPNYVTLVCVL 322
DA F+ MPERNLV WN++I ++ G ++ + EM + +P+ TLV VL
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
C+R + G K + +K + ++D+ + G + A I K M
Sbjct: 300 PVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKN 357
Query: 383 ISVWGALL 390
+ W ++
Sbjct: 358 VVSWNTMV 365
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 336/613 (54%), Gaps = 35/613 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQL-HALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
I PN T + A + L G+Q+ + +++ + V + DMY K G D A
Sbjct: 236 IRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVN-ALVDMYMKCGAIDKA 294
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FDE ++NL +N +SN V G + + + + G PD IT + ++ACS+
Sbjct: 295 RKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSEL 354
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ G+ HG+++R+G +G +VCN +++ Y KC + +A VFD +++K VSW S++
Sbjct: 355 DDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLI 414
Query: 185 VVYVQNYEEENG-------------------------------CQMFLTARREGVEPKDF 213
+V+N + E+ ++F + EG+
Sbjct: 415 AGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKV 474
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ V SAC + L+L + +H K + ++ +G+ALVDM+ +CG Q A FNKM
Sbjct: 475 TMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM 534
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+R++ W A IG A +G+ A+ F+EM + P+ V V +L+A S G VE+
Sbjct: 535 VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIK--PDGVVFVALLTALSHGGLVEQ 592
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G IF SM YGI P A HY C+VDLLGRAGL+ A +I M M P +WG+LL AC
Sbjct: 593 GWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAAC 652
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ ++ AA+ + +LDP +G HVLLSN++A+ GRW++ VR +K+ G K G
Sbjct: 653 RVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPG 712
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
S I + +I F D SH T I+ ML ++ ++ GY+PD L DV E+EK
Sbjct: 713 SSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEY 772
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+A+AF LI+ G+PIR+ KNLRIC DCHS K +S RE+IVRDNNRFH
Sbjct: 773 LLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFH 832
Query: 574 RFWDGYCSCSDYW 586
F G+CSC DYW
Sbjct: 833 FFQQGFCSCGDYW 845
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 203/470 (43%), Gaps = 34/470 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FTFP + A + G Q+H +K G D+FV S Y + G D ++
Sbjct: 137 PDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRV 196
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD+M ERN+ +W + I G K A+ F + G P+ +T ++AC+ L
Sbjct: 197 FDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDL 256
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
QLG Q+ + + N + N LVD Y KC + A+ +FD +DKN V + +++ Y
Sbjct: 257 QLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNY 316
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V+ + + G P + S +SAC+ + + G+ H ++ +EG
Sbjct: 317 VRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWD 376
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--- 304
V +A+++MY KCG + A F++M + V WN++I G+ G + A F M
Sbjct: 377 NVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDS 436
Query: 305 --------------TSMRCEAVPNY------------VTLVCVLSACSRAGAVEKGMKIF 338
SM EA+ + VT+V V SAC GA++ K
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWI 495
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ K I +VD+ R G A ++ +M R +S W A + A + G
Sbjct: 496 HGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD-VSAWTAAIGAMAMEGN 554
Query: 399 PELGRIAADNLFK--LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
D + + + P D V L + G E+ + + MKD+
Sbjct: 555 GTGAIELFDEMLQQGIKP-DGVVFVALLTALSHGGLVEQGWHIFRSMKDI 603
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 16/371 (4%)
Query: 30 KQLHALALKSGQIH------DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYI 83
KQLH+ K+G H ++ C+ + A ++F E + + +
Sbjct: 50 KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIE--DNGIMGTHYMF 107
Query: 84 SNAVLG----GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
S+ + G G AI F L G PD TF L+AC+ + L G Q+HG +V+
Sbjct: 108 SSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVK 167
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
GF+ ++ V N L+ FYG+C E+ + VFD + ++N VSW S++ Y + + +
Sbjct: 168 MGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSL 227
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F G+ P + V+SACA++ L+LG V + +E N + +ALVDMY K
Sbjct: 228 FFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMK 287
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CG+I A F++ ++NLV +N I+ Y QG A L+ EM ++ P+ +T++
Sbjct: 288 CGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEM--LKHGPRPDRITML 345
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+SACS V G K + L+ G++ ++++ + G + A + M
Sbjct: 346 SAVSACSELDDVSCG-KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN 404
Query: 380 RPTISVWGALL 390
+ +S W +L+
Sbjct: 405 KTRVS-WNSLI 414
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
M+ E I+ + T + A L K +H +K IH D+ +G + DM+++ G
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGY-IKKKDIHFDMHLGTALVDMFARCG 522
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++F++M +R+++ W A I + G AI+ F + + G +PD + F A L
Sbjct: 523 DPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLT 582
Query: 120 ACSDCSLLQLG-------RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
A S L++ G + ++G ++ G C +VD G+ + A + + +
Sbjct: 583 ALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG----C--MVDLLGRAGLLSEALSLINSM 636
Query: 173 -IDKNDVSWCSML 184
++ NDV W S+L
Sbjct: 637 QMEPNDVIWGSLL 649
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 330/558 (59%), Gaps = 3/558 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH +LK +++ V + Y+K G A ++F + + + +WNA I
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ ++DA + ++ +G PD T C+ L+ACS L+LG+++HGF++R+ + ++ V
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 284
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++ Y C E+ + +FD + DK+ VSW +++ Y+QN + +F G++
Sbjct: 285 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ V AC+ + L LGR HA A+K +E + F+ +L+DMY K GSI +
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 404
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
FN + E++ WNA+I GY G A A+ FEEM R P+ +T + VL+AC+ +G
Sbjct: 405 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ--RTGHNPDDLTFLGVLTACNHSG 462
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII-KEMPMRPTISVWGA 388
+ +G++ M +G+KP +HYACV+D+LGRAG +D+A ++ +EM + +W +
Sbjct: 463 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 522
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL++CR++ E+G A LF+L+P N+VLLSN++A G+WE+ VR+ M ++ +
Sbjct: 523 LLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 582
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+K AGCSWI + ++ F + + EI+++ + L ++ GY PDT +D+ E
Sbjct: 583 RKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSE 642
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK+ ++ HSEK+AL +GLI G IR+ KNLRIC DCH+A K IS ++ RE++VRD
Sbjct: 643 EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRD 702
Query: 569 NNRFHRFWDGYCSCSDYW 586
N RFH F +G CSC DYW
Sbjct: 703 NKRFHHFKNGVCSCGDYW 720
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 8/372 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H A+K ++ + + DMYSK G +A +F +N+ +WN +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 89 GGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G D + GGE D +T + C S L ++LH + ++ F N
Sbjct: 121 EGDTHGTFDVLRQML-AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N V Y KC + A+ VF GI K SW +++ + Q+ + L +
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G+ P F + S+LSAC+++ L LG+ VH ++ +E ++FV +++ +Y CG +
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ M +++LV WN +I GY G D AL F +M + ++++ V AC
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG--ISMMPVFGAC 357
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S ++ G + ++ LK+ ++ A ++D+ + G + ++ ++ + + T S
Sbjct: 358 SLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS- 415
Query: 386 WGALLNACRVYG 397
W A++ ++G
Sbjct: 416 WNAMIMGYGIHG 427
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 3/347 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ FT L A S L GK++H +++ D+FV S +Y G
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+FD M +++L +WN I+ + G P A+ F + G + I+ A
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+LGR+ H + ++ + + + L+D Y K + + VF+G+ +K+ SW
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M++ Y + + ++F +R G P D VL+AC + G R + +
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 476
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA--EIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ N+ + ++DM G+ G + A +A E ++ W +++ + +M
Sbjct: 477 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 536
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + E NYV L + + + V K + M+L+
Sbjct: 537 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 583
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----PDLITFCAFLNACSDCSLLQL 129
RN +WN+ I G + + + G+ PD+ T L C+ + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G+ +HG+ V+ D + + N L+D Y KC + A+++F +KN VSW +M+ +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 190 NYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + + A E V+ + I + + C + L + +H ++K N
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V +A V Y KCGS+ A+ F+ + + + WNA+IGG+A ++L + +M
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI- 239
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+P+ T+ +LSACS+ ++ G ++
Sbjct: 240 -SGLLPDSFTVCSLLSACSKLKSLRLGKEV 268
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 327/590 (55%), Gaps = 36/590 (6%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+LH+ +K+G + + D+Y K GL A ++FDEMP R+ +W + ++
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 91 RPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ + + G +PD F + ACS L+LG+Q+H + S F + V
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA------ 203
+ L+D Y KC + A+ VFD I+ KN VSW SM+ Y ++ + +FL A
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203
Query: 204 -------------------------RREGVEPKD-FMISSVLSACARIAGLELGRSVHAV 237
RREG++ D ++SSV+ CA +A LELG+ +H +
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ E +F+ +ALVDMY KC I A+ F +MP ++++ W +II G A G A+ A
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ ++EM R + PN VT V +L ACS AG V +G ++F SMT Y I P +HY C+
Sbjct: 324 LTLYDEMVLSRIK--PNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DLL R+G +D A ++ ++P +P W +LL+AC + E+G AD + L P D
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDP 441
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT-SHERN 476
++LLSN++A W VRK M + ++K G S I +F A ++ H
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI +L L EM+ GY+P+T+F LYD+E++EK ++ HSE++A+A+GL+ PG
Sbjct: 502 NEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTI 561
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLRICGDCH+ KFIS IV RE++VRD R+H F +G CSC+D+W
Sbjct: 562 IRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 36/379 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F F C+ +A S+L GKQ+HA + S D V S DMY+K G D+A
Sbjct: 101 LQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEAR 160
Query: 66 KMFDEM-------------------------------PERNLATWNAYISNAVLGGRPKN 94
+FD + P RNL +W A IS + G
Sbjct: 161 AVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIY 220
Query: 95 AIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+ F +RR G + D + + + C++ +LL+LG+Q+HG ++ GF+ + + N LV
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
D Y KC+++ AK +F + K+ +SW S++V Q+ + E ++ ++P +
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340
Query: 214 MISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+L AC+ + GR + ++ + ++ + L+D+ + G + +AE +K
Sbjct: 341 TFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDK 400
Query: 273 MPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+P + + W +++ + +M + + + ++ E Y+ L V + G+V
Sbjct: 401 IPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSV 460
Query: 332 EKGMKIFYSMTLKYGIKPG 350
K K+ SM ++ +PG
Sbjct: 461 SKVRKLMSSMEVRK--EPG 477
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L CAR +H+ +KA + + + + L+D+YGKCG I A F++MP R+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V W +I+ + LS M + P++ C++ ACS G + G ++
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHD-GLQPDHFVFACIVRACSSLGYLRLGKQVH 128
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
L + ++D+ + G D A + + + ++S W ++++
Sbjct: 129 ARFMLSXFCDDEVVK-SSLIDMYTKCGQPDEARAVFDSILFKNSVS-WTSMIS 179
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 335/557 (60%), Gaps = 5/557 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ LH +K+ +V + DMYSK G + A ++F +M + + +W + I+ V
Sbjct: 315 GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVR 374
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +AI F ++ G PD+ T + ++AC+ S L GR +H +++++G N+ V
Sbjct: 375 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 434
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L++ Y KC V A++VF I K+ VSW +M+ Y QN ++FL +++
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-F 493
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+P D ++ VL ACA +A L+ GR +H ++ ++ V ALVDMY KCG + A++
Sbjct: 494 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 553
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ +P+++L+ W +I GY G + A+S+F EM E P+ + +L+ACS +
Sbjct: 554 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE--PDESSFSAILNACSHS 611
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + +G K F SM + G++P EHYACVVDLL R G + +AY+ I+ MP++P ++WG
Sbjct: 612 GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 671
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+ CR++ +L A+++F+L+P+++ +V+L+N++A +WEE +RK M+ G
Sbjct: 672 LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 731
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K+ GCSWI V + +IF A ++ H + +I +L+KL +M+ Y + L + ++
Sbjct: 732 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDD 791
Query: 509 EEK-MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EK M + GH SEK A+AFG++ +PPG +R++KN R+CGDCH KF+S E+++R
Sbjct: 792 MEKEMIQCGH-SEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLR 850
Query: 568 DNNRFHRFWDGYCSCSD 584
D+NRFH F DG CSC D
Sbjct: 851 DSNRFHHFKDGLCSCRD 867
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 215/398 (54%), Gaps = 7/398 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ + N +TF C+ K +AL K++H LK G + V S Y K G
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 245
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FDE+ E ++ +WN+ I+ V+ G N ++ FI + G E DL T + L A
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 305
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L LGR LHGF V++ F V N L+D Y KC + A VF + D VSW
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YV+ + +F + +GV P + ++S++ ACA + L+ GR VH+ +K
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ V +AL++MY KCGS+++A + F+K+P +++V WN +IGGY+ + AL
Sbjct: 426 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALEL 485
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC-VVD 359
F +M + P+ +T+ CVL AC+ A++KG +I + L+ G H AC +VD
Sbjct: 486 FLDMQK---QFKPDDITMACVLPACAGLAALDKGREI-HGHILRRGYFSDL-HVACALVD 540
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + GL+ A + +P + IS W ++ ++G
Sbjct: 541 MYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYGMHG 577
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 181/362 (50%), Gaps = 4/362 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++H++ + +G D +G MY G K+FD++ + WN +S
Sbjct: 113 GKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 172
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + ++ F +++ G + TF L + ++ +++HG++++ GF N +V
Sbjct: 173 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV 232
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y K V A +FD + + + VSW SM+ V N NG ++F+ GV
Sbjct: 233 VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV 292
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E + SVL ACA I L LGR++H VKAC + + L+DMY KCG++ A
Sbjct: 293 EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE 352
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F KM + +V W +II Y +G A+ F+EM S P+ T+ ++ AC+ +
Sbjct: 353 VFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR--PDIYTVTSIVHACACS 410
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+++KG + +S +K G+ ++++ + G V+ A + ++P++ +S W
Sbjct: 411 SSLDKGRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS-WNT 468
Query: 389 LL 390
++
Sbjct: 469 MI 470
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 169/397 (42%), Gaps = 44/397 (11%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
NA I+ G +NAI+ + E L ++C+ L C++ L+ G+++H ++
Sbjct: 65 NAKINKFCEMGDLRNAIELLT--KSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
+G + ++ LV Y C ++ + +FD I++ W ++ Y + +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F ++ GV + + VL A + ++ + VH +K N V ++L+ Y K
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G ++ A F+++ E ++V WN++I G G + L F +M + E + TLV
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV--DLTTLV 300
Query: 320 CVLSACSRAGAVEKGM-------------KIFYSMTL-----KYGIKPGAEH-------- 353
VL AC+ G + G ++ +S TL K G GA
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 360
Query: 354 ----YACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAA 406
+ ++ R GL A + EM +RP I ++++AC + GR
Sbjct: 361 TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 420
Query: 407 DNLFKLDPNDSGNHV----LLSNMFAATGRWEEADLV 439
+ K N G+++ L NM+A G EEA LV
Sbjct: 421 SYVIK---NGMGSNLPVTNALINMYAKCGSVEEARLV 454
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D T C+ A + L G+++H L+ G D+ V C+ DMY+K GL A +
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 554
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD +P+++L +W I+ + G AI F +R G EPD +F A LNACS LL
Sbjct: 555 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLL 614
Query: 128 QLG 130
G
Sbjct: 615 NEG 617
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 319/545 (58%), Gaps = 10/545 (1%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ D+ + Y++ G A ++F+E P R++ TW A + V G A F
Sbjct: 216 VRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDE 275
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ + +++ + + + +GR+L + N+ N ++ Y + +
Sbjct: 276 M----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFP----NIGSWNIMISGYCQNGD 327
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ A+ +FD + ++ VSW +++ Y QN E M + +R+G LSA
Sbjct: 328 LAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSA 387
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
CA IA LELG+ VH V+ E VG+ALV MY KCG I +A F + +++V W
Sbjct: 388 CADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSW 447
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N ++ GYA G AL+ FE M + + P+ +T+V VLSACS G ++G + F+SM
Sbjct: 448 NTMLAGYARHGFGRQALTVFESMITAGVK--PDEITMVGVLSACSHTGLTDRGTEYFHSM 505
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
YGI P ++HYAC++DLLGRAG ++ A +I+ MP P + WGALL A R++G EL
Sbjct: 506 NKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMEL 565
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
G AA+ +FK++P++SG +VLLSN++AA+GRW + +R +M+ +G++K G SW+ V+N
Sbjct: 566 GEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQN 625
Query: 462 RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+IH F D H I A L +L +MK GY+ T L+DVEEEEK + +HSEK
Sbjct: 626 KIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEK 685
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+AFG++ +P G PIR+ KNLR+C DCH+A K IS IVGR +IVRD++R+H F +G CS
Sbjct: 686 LAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICS 745
Query: 582 CSDYW 586
C DYW
Sbjct: 746 CRDYW 750
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 46/389 (11%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+F Y++ DA +FD MPE+++ +WNA +S V G A D F +
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
I++ L A L+ R+ L S D + CN L+ Y K N +G
Sbjct: 154 HKNS----ISWNGLLAAYVRSGRLEEARR----LFESKSDWELISCNCLMGGYVKRNMLG 205
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQN---------YEEENGCQMFL------------- 201
A+ +FD I ++ +SW +M+ Y Q+ +EE +F
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGM 265
Query: 202 --TARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
ARR E + ++ + +++ A+ +++GR + + NI + ++
Sbjct: 266 LDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGREL----FEEMPFPNIGSWNIMISG 321
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y + G + A F+ MP+R+ V W AII GYA G + A++ EM R N
Sbjct: 322 YCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMK--RDGESLNRS 379
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T C LSAC+ A+E G ++ + ++ G + G +V + + G +D AY++ +
Sbjct: 380 TFCCALSACADIAALELGKQV-HGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQG 438
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIA 405
+ + +S W +L Y + GR A
Sbjct: 439 VQHKDIVS-WNTMLAG---YARHGFGRQA 463
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 164/404 (40%), Gaps = 67/404 (16%)
Query: 47 VGCS-AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT 105
V C+ A + + G D A +FD MP RN ++NA IS + + A D F +
Sbjct: 34 VKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM--- 90
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
DL ++ L + L+ R L S + +V N ++ Y + V A
Sbjct: 91 -PHKDLFSWNLMLTGYARNRRLRDAR----MLFDSMPEKDVVSWNAMLSGYVRSGHVDEA 145
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ VFD + KN +SW +L YV++ E ARR D+ + S
Sbjct: 146 RDVFDRMPHKNSISWNGLLAAYVRSGRLEE-------ARRLFESKSDWELISC------- 191
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
C+ G Y K + DA F+++P R+L+ WN +I
Sbjct: 192 ---------------NCLMGG----------YVKRNMLGDARQLFDQIPVRDLISWNTMI 226
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GYA G A FEE V + T ++ A + G +++ ++F M K
Sbjct: 227 SGYAQDGDLSQARRLFEE------SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR 280
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ Y ++ + +D E+ +EMP P I W +++ G + G +A
Sbjct: 281 EMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMIS-----GYCQNGDLA 329
Query: 406 -ADNLFKLDPN-DSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
A NLF + P DS + + +A G +EEA + EMK G
Sbjct: 330 QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ S N TF C A + + GKQ+H +++G VG + MY K G
Sbjct: 369 MKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGC 428
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +F + +++ +WN ++ G + A+ F ++ G +PD IT L+A
Sbjct: 429 IDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSA 488
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGK 158
CS L G + H G N ++D G+
Sbjct: 489 CSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 329/601 (54%), Gaps = 36/601 (5%)
Query: 20 SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATW 79
S+A P+ K+LHA +K+G + + + Y K GL DA ++FD +P R+ W
Sbjct: 13 SAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAW 72
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL--GRQLHGFL 137
+ ++ L RP A+ +L TG PD F + + AC++ +L + G+Q+H
Sbjct: 73 ASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARF 132
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY---------- 187
S F + V + L+D Y K + VFD I N +SW +M+ Y
Sbjct: 133 FLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAF 192
Query: 188 ---------------------VQNYEEENGCQMFLTARREGVEPKD-FMISSVLSACARI 225
VQ+ + +F+ R EG+ D ++SSV+ ACA +
Sbjct: 193 RLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANL 252
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
A ELG+ +H V + E +F+ +AL+DMY KC + A+ F +M +++V W +II
Sbjct: 253 ALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSII 312
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
G A G A+ AL+ ++EM + PN VT V ++ ACS AG V KG +F +M +
Sbjct: 313 VGTAQHGQAEEALALYDEMVLAGVK--PNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDH 370
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
GI P +HY C++DL R+G +D A +I+ MP+ P W ALL++C+ +G ++
Sbjct: 371 GISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRI 430
Query: 406 ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHI 465
AD+L L P D +++LLSN++A G WE+ VRK M + KK G S I + H+
Sbjct: 431 ADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHV 490
Query: 466 FQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALA 525
F A +TSH EI ++ +L EEM+ GY PDT+ L+D++++EK ++ HSE++A+A
Sbjct: 491 FYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVA 550
Query: 526 FGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
+GL+ PG IRI KNLR+CGDCH+ K IS I RE+ VRD R+H F DG CSC+D+
Sbjct: 551 YGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDF 610
Query: 586 W 586
W
Sbjct: 611 W 611
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 1 MRRECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR E IS D + A + L + GKQ+H + + G +F+ + DMY+K
Sbjct: 229 MRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCS 288
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A +F EM +++ +W + I G+ + A+ + + G +P+ +TF ++
Sbjct: 289 DLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIH 348
Query: 120 ACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKND 177
ACS L+ GR L +V G ++ L+D + + + A+ + + ++ ++
Sbjct: 349 ACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDE 408
Query: 178 VSWCSML 184
+W ++L
Sbjct: 409 PTWAALL 415
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/372 (52%), Positives = 258/372 (69%), Gaps = 2/372 (0%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ +L ACA +A LE G+ VHA +K E ++ V + LVDMYGKCG I+DA+ F+K+
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
E ++ WNA+I G A G A+ FE+M ++ PN +T V VLS CS AG V++G
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQM--LQTGVKPNQITFVVVLSGCSHAGLVDEG 118
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F SMT +GI P AEHY+C+VDL GRAG +D A I +MP+ P SVWG+LL ACR
Sbjct: 119 RNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACR 178
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
V+G EL A + L +L P + G +VLLSN++AA GRW++A VRK MKD +KK GC
Sbjct: 179 VHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGC 238
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI V+N++H F D+SH + EI L L +MKAAGYIP+TNF L+DVEEE+K
Sbjct: 239 SWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWI 298
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+GHHSEK+A+AFG+I+ PPG IR+ KNLR+CGDCH+A KFIS IV RE+++RD +RFH
Sbjct: 299 LGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHH 358
Query: 575 FWDGYCSCSDYW 586
F DG CSC DYW
Sbjct: 359 FKDGQCSCGDYW 370
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC+ + L+ G+Q+H +++ GF+ +VSV NGLVD YGKC + A+ VF +++
Sbjct: 3 GILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEP 62
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV- 234
+ SW +M+ Q+ + +F + GV+P VLS C+ ++ GR+
Sbjct: 63 DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122
Query: 235 ------HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
H ++ KA S +VD++G+ G + +A N+MP E N W +++G
Sbjct: 123 DSMTRDHGISPKA------EHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGA 176
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
G+ ++A + E++ + E YV L + +A R AG V K MK
Sbjct: 177 CRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMK 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
+ +A +++ GKQ+HA +K G DV V DMY K G +DA ++F ++ E +
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+A+WNA IS G K A+ F + +TG +P+ ITF L+ CS L+ GR
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 136 FLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSML 184
+ R G + +VD +G+ + A + + ++ N W S+L
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL 174
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 335/580 (57%), Gaps = 2/580 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
S N++ A++ + G+Q H A+KSG +V + MY + +DA K
Sbjct: 105 SLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVK 164
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F+ + ++ +N+ I+ + G +I ++ + D +++ A L C+
Sbjct: 165 VFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKE 224
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L LG Q+H ++ + NV V + LVD YGKC+ A F+ + +KN VSW +++
Sbjct: 225 LLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTA 284
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y QN E+ Q+FL EGV P +F + L++CA +A L+ G ++ A A+K G
Sbjct: 285 YTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGA 344
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ V +AL++MY K GSI DA F MP R++V WN++I GYAH G A A+ F +M
Sbjct: 345 LSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDM-- 402
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ E VP+YVT V VL AC++ G V++G+ M + GIKPG EHY C+V LL RAG
Sbjct: 403 LLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGR 462
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+D A + I + + W +LL++C+VY LG A+ + +L PND G +VLLSNM
Sbjct: 463 LDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNM 522
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A RW+ VRK M++ G++K G SWI V + +H+F ++D +H+ +I L +L
Sbjct: 523 YAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKEL 582
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++K GY+P+ L+DVE E+K + +HSEK+ALAFGLI P G IRI KNLRIC
Sbjct: 583 IGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRIC 642
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K IS + R+++VRD RFH DG CSC DYW
Sbjct: 643 DDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 10/364 (2%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
TGK +HA +++ DV Y K G A +MFD MP RN + N +S
Sbjct: 29 TGKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYA 87
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
GR DA L+ + L+A + +GRQ HG+ V+SG +
Sbjct: 88 SAGRHS---DALALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPY 144
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VCN ++ Y +C V A VF+ + + ++ SM+ ++ E + ++ + E
Sbjct: 145 VCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEV 204
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ +VL CA L LG VHA A+K +E N++VGSALVDMYGKC +DA
Sbjct: 205 EQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAH 264
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 326
AF +PE+N+V W A++ Y + AL F + + E V PN T L++C+
Sbjct: 265 SAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLD---LEIEGVRPNEFTYAVALNSCA 321
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
A++ G + S +K G ++++ ++G + A+ + MP R +S W
Sbjct: 322 GLAALKNGNALSAS-AMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVS-W 379
Query: 387 GALL 390
+++
Sbjct: 380 NSVI 383
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 130 GRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+ +H ++R+ FD V N L+ FYGKC +GLA+ +FD + +N VS ++ Y
Sbjct: 30 GKAIHAQMIRAAHFD--VIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYA 87
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ + A ++++S+ LSA A + +GR H AVK+ ++ + +
Sbjct: 88 SAGRHSDALALLKAA---DFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPY 144
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +A++ MY +C ++DA F + ++ +N++I G+ G D S + SM
Sbjct: 145 VCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFD---GSIRIVRSMV 201
Query: 309 CEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
E ++V+ V VL C+ + G ++ ++ LK ++ + +VD+ G+
Sbjct: 202 GEVEQWDHVSYVAVLGHCASTKELLLGCQV-HAQALKRRLEQNVYVGSALVDMYGKCDCA 260
Query: 368 DRAYEIIKEMPMRPTISVWGALLNA 392
A+ + +P + +S W A++ A
Sbjct: 261 RDAHSAFEVLPEKNVVS-WTAVMTA 284
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + PN+FT+ + + L G L A A+K+G + V + +MYSK+G D
Sbjct: 304 EGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHD 363
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F MP R++ +WN+ I G + A+ F ++ P +TF L AC+
Sbjct: 364 AWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQ 423
Query: 124 CSLLQLG 130
L+ G
Sbjct: 424 LGLVDEG 430
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/626 (37%), Positives = 338/626 (53%), Gaps = 60/626 (9%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLKDDADKMFDEMPE 73
L K ++ P KQLHA+ +K+GQI D F +S + D A +F +MPE
Sbjct: 22 LSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDI-DYARAVFRQMPE 80
Query: 74 RNLATWN------AYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
N WN A ++ L A + R +P+ TF + L AC+ S L
Sbjct: 81 PNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRV--KPNRFTFPSVLKACARASRL 138
Query: 128 QLGRQLHGFLVRSGF--------------------------------------------- 142
+ G+Q+HG +V+ GF
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKR 198
Query: 143 --DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
DGNV + N ++D + ++ AK +FD + ++ VSW M+ Y QN +F
Sbjct: 199 KQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLF 258
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ ++P + SVL A ARI LELG+ +H A K VE + +GSALVDMY KC
Sbjct: 259 QEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKC 318
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
GSI A F +P+RN + W+AIIG +A G A+ A+ F M + PN V +
Sbjct: 319 GSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMG--KAGVTPNDVAYIG 376
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+LSACS AG VE+G F M G++P EHY C+VDLLGRAG ++ A E+I+ MP+
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 381 PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
P +W ALL AC+++ ++G A+ L +L P+DSG++V LSN++A+ G WE VR
Sbjct: 437 PDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVR 496
Query: 441 KEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN 500
+MK + I+K GCSWI + IH F +D SH + EIQAML ++ ++++ GY P+T
Sbjct: 497 LKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Query: 501 FALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
+ +E+E+ + +HSEKIA+AFGLI+ P P++I KNLRIC DCH++ K IS I
Sbjct: 557 EVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIY 616
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
R++IVRD RFH+F G CSC DYW
Sbjct: 617 KRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 164/387 (42%), Gaps = 55/387 (14%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA- 64
+ PN FTFP + KA + GKQ+H L +K G D FV + MY + +DA
Sbjct: 118 VKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAY 177
Query: 65 ------------------DK----------------------------MFDEMPERNLAT 78
DK +FDEMP R++ +
Sbjct: 178 SLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVS 237
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN IS G AI+ F ++ + +P+ +T + L A + L+LG+ +H +
Sbjct: 238 WNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAG 297
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
++ + + + + LVD Y KC + A VF+ + +N ++W +++ + + E+
Sbjct: 298 KNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAII 357
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMY 257
F + GV P D +LSAC+ +E GRS + VK ++ I +VD+
Sbjct: 358 HFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLL 417
Query: 258 GKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
G+ G +++AE MP E + V W A++G + M E + + +YV
Sbjct: 418 GRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYV 477
Query: 317 TLVCVLS------ACSRAGAVEKGMKI 337
L + + A +R KGM I
Sbjct: 478 ALSNLYASLGNWEAVARVRLKMKGMDI 504
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN T + A + + GK +H A K+ D +G + DMYSK G
Sbjct: 261 MQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGS 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F+ +P+RN TW+A I + GR ++AI F + + G P+ + + L+A
Sbjct: 321 IDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ GR +V+ G + +VD G+ + A+ + + I+ +DV
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440
Query: 179 SWCSML 184
W ++L
Sbjct: 441 IWKALL 446
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 348/619 (56%), Gaps = 41/619 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T+ + S + G+++HA + +G D+ V + +MY K G +A
Sbjct: 203 VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAR 262
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD+M +R++ +WN I VL G A++ + L G + TF + L ACS
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR +H ++ G D V+V LV+ Y KC + A+ VF+ + +++ V+W +++
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 186 VYVQN-YEE----------------------------ENGCQMF-LTARRE-----GVEP 210
Y N Y + +NGC + + RE G++P
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKP 442
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+VL ACA + L +++HA ++ +E N+ V + L++MY +CGS+++AE F
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
E+ +V W A++ ++ G AL F+EM E V P+ VT +L C+ G
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD---LEGVKPDDVTYTSILFVCTHGG 559
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++E+G + F M + + P A+H+A +VDLLGR+G + A E+++ MP P W
Sbjct: 560 SLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTF 619
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++GK ELG AA+ +++LDP+ + ++ +SN++AA G WE+ VRK+M++ G+K
Sbjct: 620 LTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G S+I V ++H F + H R EI LT+L M+AAGY+PDT L+DV E
Sbjct: 680 KLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEG 739
Query: 510 EKMTEVGHHSEKIALAFGLIAIP-PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EK T + +HSEK+A+AFGL++ G PIR+ KNLR+C DCH+A KFI+ I GR++IVRD
Sbjct: 740 EKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRD 799
Query: 569 NNRFHRF-WDGYCSCSDYW 586
NRFHRF DG CSC DYW
Sbjct: 800 CNRFHRFSSDGKCSCGDYW 818
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 212/456 (46%), Gaps = 21/456 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + + TF + A S+L G+++H SG + + MY++ G
Sbjct: 101 MNLQGLGTDHVTFVSVLGACSSL---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGS 157
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +MF + R+ +WNA I G A+ F ++ +P+ T+ ++
Sbjct: 158 VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISG 216
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S +L GR++H +V +GFD ++ V L++ YGKC A+ VFD + ++ VSW
Sbjct: 217 FSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ YV N + +++ EG + S+L AC+ + L GR VH+ ++
Sbjct: 277 NVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH---ADMA 297
++ + V +ALV+MY KCGS+++A FN M R+ V W+ +IG YA G+ A A
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKA 396
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F+ + S R N + V + C+ A MKIF MT G+KP A + V
Sbjct: 397 RKVFDRLGS-RDTISWNAMITTYVQNGCAVA-----AMKIFREMTGAAGLKPDAVTFIAV 450
Query: 358 VDL---LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
++ LGR V + I E + + V L+N G E A+ LF
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE----EAERLFAAAK 506
Query: 415 NDS-GNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+ + + F+ GR+ EA + +EM G+K
Sbjct: 507 EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 240/512 (46%), Gaps = 22/512 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++ TF + + S+ V G+ LH S D VG + MY K DA +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 68 FDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
F+ M +RN+ +WNA I+ G A+ + + G D +TF + L ACS S
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--S 122
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L Q GR++H + SG D S+ N LV Y + VG AK +F + +++ SW ++++
Sbjct: 123 LAQ-GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ Q+ + ++F + + V+P +V+S + L GR +HA V +
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ V +AL++MYGKCGS +A F+KM +R++V WN +IG Y G AL ++++
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ T V +L ACS A+ +G ++ +S L+ G+ +V++ + G
Sbjct: 301 MEGFKRTK--ATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ A ++ M R ++ W L+ A G + R A +L D+ + +
Sbjct: 358 SLEEARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+ G A + +EM K ++I+V S R +E++A+ +
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC-------ASLGRLSEVKALHAQ 469
Query: 486 LRE-EMKAAGYIPDTNFALY----DVEEEEKM 512
+ E E+++ + +T +Y +EE E++
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERL 501
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 10/285 (3%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+PD +TF L +CS C + GR LH + S F+ + V N L+ YGKC+ + A+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 168 VFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
VF+ + +N VSW +M+ Y QN ++ +G+ SVL AC+ +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
A GR +H + ++ + +ALV MY + GS+ DA+ F + R+ WNA+I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
++ G AL F+E M+C+ PN T + V+S S + +G KI ++ +
Sbjct: 181 LAHSQSGDWSGALRIFKE---MKCDVKPNSTTYINVISGFSTPEVLPEGRKI-HAEIVAN 236
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G ++++ G+ G A E+ +M R +S W ++
Sbjct: 237 GFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-WNVMI 280
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 327/590 (55%), Gaps = 36/590 (6%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
+LH+ +K+G + + D+Y K GL A ++FDEMP R+ +W + ++
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 91 RPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ + + G +PD F + ACS L+LG+Q+H + S F + V
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA------ 203
+ L+D Y KC + A+ VFD I+ KN VSW SM+ Y ++ + +FL A
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203
Query: 204 -------------------------RREGVEPKD-FMISSVLSACARIAGLELGRSVHAV 237
RREG++ D ++SSV+ CA +A LELG+ +H +
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ E +F+ +ALVDMY KC I A+ F +MP ++++ W +II G A G A+ A
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ ++EM R + PN VT V +L ACS AG V +G ++F SMT Y I P +HY C+
Sbjct: 324 LTLYDEMVLSRIK--PNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DLL R+G +D A ++ ++P +P W +LL+AC + E+G AD + L P D
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDP 441
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT-SHERN 476
++LLSN++A W VRK M + ++K G S I +F A ++ H
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI +L L EM+ GY+P+T+F LYD+E++EK ++ HSE++A+A+GL+ PG
Sbjct: 502 NEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTI 561
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLRICGDCH+ KFIS IV RE++VRD R+H F +G CSC+D+W
Sbjct: 562 IRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 36/379 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F F C+ +A S+L GKQ+HA + S D V S DMY+K G DDA
Sbjct: 101 LQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDAR 160
Query: 66 KMFDEM-------------------------------PERNLATWNAYISNAVLGGRPKN 94
+FD + P RNL +W A IS + G
Sbjct: 161 AVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIY 220
Query: 95 AIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+ F +RR G + D + + + C++ +LL+LG+Q+HG ++ GF+ + + N LV
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
D Y KC+++ AK +F + K+ +SW S++V Q+ + E ++ ++P +
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340
Query: 214 MISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+L AC+ + GR + ++ + ++ + L+D+ + G + +AE +K
Sbjct: 341 TFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDK 400
Query: 273 MPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+P + + W +++ + +M + + + ++ E Y+ L V + G+V
Sbjct: 401 IPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSV 460
Query: 332 EKGMKIFYSMTLKYGIKPG 350
K K+ SM ++ +PG
Sbjct: 461 SKVRKLMSSMEVRK--EPG 477
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L CAR +H+ +KA + + + + L+D+YGKCG I A F++MP R+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V W +I+ + LS M + P++ C++ ACS G + G ++
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHD-GLQPDHFVFACIVRACSSLGYLRLGKQVH 128
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
L + + ++D+ + G D A + + + ++S W ++++
Sbjct: 129 ARFMLSFFCDDEVVK-SSLIDMYTKCGQPDDARAVFDSILFKNSVS-WTSMIS 179
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/587 (37%), Positives = 332/587 (56%), Gaps = 8/587 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RRE IS T+ L K + + GK++H+ +K G D + +MY K G
Sbjct: 20 RREEIS----TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGI 75
Query: 62 DDADKMFDEMPERN--LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+A +FD++ E+N + +WN I G K A+ F + G + +T ++
Sbjct: 76 AEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAID 135
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ + GR +H V + + V LV+ +GKC V A+ VFD + KN V+
Sbjct: 136 ACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVT 195
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ VY QN++ + Q+F EGV+P +++ ACA +A GR VH
Sbjct: 196 WNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDIT 255
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + ++ +G+A++ YGKCG + +A F+ + ++N V W+AI+ YA G+ A+
Sbjct: 256 ASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIE 315
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+ EM E N +T + +L ACS AG G+ F SM +G+ P EHY ++D
Sbjct: 316 LYHEMVQGGLEV--NGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLID 373
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR+G + + ++I MP P S W ALL ACR++G + G A+ +++LDP DSG
Sbjct: 374 LLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGP 433
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LLSN++++TGR +EA RK M+ GI K G S I VK+R+H F A H + I
Sbjct: 434 YILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRI 493
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
A + +L+ +K AGY+ D L DVEEEEK + +HSE++A+AFGLI+ PPG + I
Sbjct: 494 HAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHI 553
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A K IS +VGR+++VRD RFH F +G CSC DYW
Sbjct: 554 VKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 171/392 (43%), Gaps = 28/392 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N T A ++L G+ +HA+A+ D VG S +M+ K
Sbjct: 118 MDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKN 177
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD +P +NL TWN ++ + K AI F + G +PD +TF ++A
Sbjct: 178 VDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDA 237
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + GR +H + SG +V++ ++ FYGKC + A+ +FD + KN V+W
Sbjct: 238 CAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTW 297
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++L Y QN E +++ + G+E +L AC+ GRS+ V
Sbjct: 298 SAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHA-----GRSMDGVDYF 352
Query: 241 ACVEGNIFVGSA------LVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGH 293
+ + V L+D+ G+ G +Q +E N MP E + W A++G G
Sbjct: 353 VSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGD 412
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI--KPGA 351
D E + + E Y+ L + S+ R + K +M L+ GI +PG
Sbjct: 413 VDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRK---AMRLR-GITKQPG- 467
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
L + DR +E + + P +
Sbjct: 468 ---------LSSIEVKDRVHEFMAAQKLHPQL 490
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 334/581 (57%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN++ F + + S V G Q H ALKSG + +V + MYS+ A
Sbjct: 125 MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 184
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++ E+P ++ ++N I+ + G P A++ + D +T+ CS
Sbjct: 185 SVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLK 244
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG Q+H + R+G + + V + ++D YGKC + A+ VF+ + KN VSW ++L
Sbjct: 245 DLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILA 304
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN E F +G+ P ++ + +L++CA I+ L G+ +H K+ E
Sbjct: 305 AYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFED 364
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+I VG+AL++MY K GSI+ A F +M R+ + W+A+I G +H G AL F+EM
Sbjct: 365 HIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEML 424
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ + P+YVT V VLSAC+ G+V++G + + GI+PG EHY C+V LL +AG
Sbjct: 425 AAK--ECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAG 482
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+D A +K P++ + W LL+AC V+ LG+ A+ + ++DP D G ++LLSN
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSN 542
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
M+A RW+ +RK M++ +KK G SWI ++N IH+F ++ +H + +I + +
Sbjct: 543 MYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQE 602
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L ++ GY+PD +DVE+E+K V +HSEK+A+A+GL+ P G PIR+ KNLR+
Sbjct: 603 LLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRM 662
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHSA K IS + R +IVRD NRFH F DG CSC+DYW
Sbjct: 663 CVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 10/393 (2%)
Query: 16 LFKASSALHIPVTGKQLHA-LALKSGQIHDVFVGC-SAFDMYSKTGLKDDADKMFDEMPE 73
L K S+ GK +HA L + + D V S ++Y+K A +FD M +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQ 132
RN+ +W A ++ G + F + P+ F +++CSD + G Q
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
HG+ ++SG + V N L+ Y + ++V A V+ + + S+ ++ ++N
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
++ E + + + C+ + L LG VH + E + FV SA
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
++DMYGKCG+I +A FN++ +N+V W AI+ Y+ G + AL+ F EM +
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVD--GLL 328
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN T +L++C+ A+ G K+ ++ K G + ++++ ++G ++ A++
Sbjct: 329 PNEYTFAVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
+ EM R +I+ W A++ +G LGR A
Sbjct: 388 VFLEMICRDSIT-WSAMICGLSHHG---LGREA 416
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 6/354 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ECI ++ T+ F S L G Q+H ++G +D FV + DMY K G
Sbjct: 221 MVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGN 280
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K+F+ + +N+ +W A ++ G + A++ F + G P+ TF LN+
Sbjct: 281 ILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ S L G+ LH + +SGF+ ++ V N L++ Y K + A VF +I ++ ++W
Sbjct: 341 CAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITW 400
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ + +F P VLSACA + ++ G ++ +
Sbjct: 401 SAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMK 460
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG-YAHQGHADMA 297
+ +E + + +V + K G + +AE P + ++V W ++ + HQ + +
Sbjct: 461 QTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYG-LG 519
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
E + M V Y+ L + + R V K K+ +K +PGA
Sbjct: 520 KKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKK--EPGA 571
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 347/652 (53%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +P FT + + + G+++H+ +K G V V S +MY K G
Sbjct: 49 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 108
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
+ A +F+ MP R++++WNA +S NA++ G +N
Sbjct: 109 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 168
Query: 95 AIDAFI------NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+DA L + PD T + L+AC++ +++G+Q+H +++R+ N V
Sbjct: 169 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 228
Query: 149 CNGLVDFYGKCNEVGLAKVVFD--------------------------------GIIDKN 176
N L+ Y K V A+ + D G+++
Sbjct: 229 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 288
Query: 177 DV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
DV +W +M+V Y QN + +F + G EP + +++VLS CA +A L+ G+ +H
Sbjct: 289 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 348
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHA 294
A+++ +E + V +A++ MY + GS A F+++ R + W ++I A G
Sbjct: 349 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 408
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FEEM +R P+ +T V VLSACS AG V +G + + + ++ I P HY
Sbjct: 409 EEAVGLFEEM--LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 466
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDLL RAGL A E I+ MP+ P WG+LL+ACRV+ EL +AA+ L +DP
Sbjct: 467 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 526
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
N+SG + ++N+++A GRW +A + K K+ ++K G SW ++++IH+F A D H
Sbjct: 527 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 586
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ + AM ++ EE+K AG++PD L+DV++E K + HSEK+A+AFGLI+ P
Sbjct: 587 QRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 646
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+C DCH+A K IS + RE+IVRD RFH F DG CSC DYW
Sbjct: 647 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 182/412 (44%), Gaps = 68/412 (16%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
M++K+G DA +F EMPER+ +W + GR AI +++ G P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------ 161
L++C+ +GR++H F+V+ G V V N +++ YGKC +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 162 -------------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
+ LA+ +F+ + D++ VSW +M+ Y QN + ++F
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 203 ARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
E + P +F I+SVLSACA + + +G+ VHA ++ + N V +AL+ Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 262 SIQDAE-------------IAFNKMPE--------------------RNLVCWNAIIGGY 288
S+++A I+F + E R++V W A+I GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
G D A+ F M + C PN TL VLS C+ ++ G +I + ++ ++
Sbjct: 301 EQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQI-HCRAIRSLLE 357
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++ + R+G A + ++ R W +++ A +G+ E
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 409
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
+ K + A+ VF + +++ VSW M+V + + L +G P F
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+++VLS+CA +GR VH+ VK + + V +++++MYGKCG + A F +MP
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
R++ WNA++ H G D+A S FE M + V+ +++ ++ G K
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDR------SIVSWNAMIAGYNQNGLDAKA 174
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDL---LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+K+F M + + P V+ LG + + + I M V AL++
Sbjct: 175 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 234
Query: 392 ACRVYGKPELGRIAADNLFKLDPN 415
G E R D + D N
Sbjct: 235 TYAKSGSVENARRIMDQSMETDLN 258
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/607 (36%), Positives = 329/607 (54%), Gaps = 78/607 (12%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ P LFK + L GKQ+H ++ SG D FV S F MY + G DA K+
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 68 FDEMPER-----------------------------------NLATWNAYISNAVLGGRP 92
FD M ++ N+ +WN +S G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
K A+ F + G PD +T + L + D +L +GR +HG++++ G + V + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 153 VDFYGKCNEV-----------------------GLAKVVFDGIIDK-------------- 175
+D YGK V GL++ +G++DK
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR---NGLVDKALEMFELFKEQTME 350
Query: 176 -NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
N VSW S++ QN ++ ++F + GV+P I S+L AC IA L GRS
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H AV+ + N+ VGSAL+DMY KCG I ++I FN MP +NLVCWN+++ G++ G A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+S FE + MR P++++ +LSAC + G ++G K F M+ +YGIKP EHY
Sbjct: 471 KEVMSIFESL--MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
+C+V+LLGRAG + AY++IKEMP P VWGALLN+CR+ +L IAA+ LF L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+ G +VLLSN++AA G W E D +R +M+ +G+KK GCSWI VKNR++ A D SH
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ +I + ++ +EM+ +G+ P+ +FAL+DVEE+E+ + HSEK+A+ FGL+ P G
Sbjct: 649 QIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDG 708
Query: 535 VPIRITK 541
P+++ +
Sbjct: 709 TPLQVER 715
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 171/439 (38%), Gaps = 76/439 (17%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q HA LKSG +D ++ YS +DAD + +P+ + ++++ I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+I F + G PD C++ S ++G+Q+H SG D + V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML------------VVYVQNYEEENGCQ 198
+ Y +C +G A+ VFD + DK DV CS L VV + + E +G +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDK-DVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 199 ------------------------MFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
MF G P +SSVL + L +GR +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-------------------- 274
H +K + + V SA++DMYGK G + FN+
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 275 ---------------ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
E N+V W +II G A G AL F EM + PN+VT+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNHVTIP 392
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+L AC A+ G + + ++ + + ++D+ + G ++ + + MP
Sbjct: 393 SMLPACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 380 RPTISVWGALLNACRVYGK 398
+ + W +L+N ++GK
Sbjct: 452 K-NLVCWNSLMNGFSMHGK 469
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 149/371 (40%), Gaps = 78/371 (21%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q H +++SG + + L+ Y N A +V I D S+ S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+F G+ P ++ ++ CA ++ ++G+ +H V+ + ++ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
++ MY +CG + DA F++M ++++V +A++ YA +G + + EM S EA
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYS------------------------------M 341
N V+ +LS +R+G ++ + +F +
Sbjct: 216 --NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 342 TLKYGIKPGAEHYACV----VDLLGRA-------------------------------GL 366
Y IK G CV +D+ G++ GL
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 367 VDRA---YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG---NH 420
VD+A +E+ KE M + W +++ C GK I A LF+ + +G NH
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD----IEALELFR-EMQVAGVKPNH 388
Query: 421 VLLSNMFAATG 431
V + +M A G
Sbjct: 389 VTIPSMLPACG 399
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN T P + A + G+ H A++ + +V VG + DMY+K G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + +F+ MP +NL WN+ ++ + G+ K + F +L RT +PD I+F + L+A
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 121 CSDCSLLQLG 130
C L G
Sbjct: 499 CGQVGLTDEG 508
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/559 (36%), Positives = 331/559 (59%), Gaps = 5/559 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ LH +K+ +V + DMYSK G +DA + F++M ++ + +W + I+ V
Sbjct: 673 GRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVR 732
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +AI F + G PD+ + + L+AC+ + L GR +H ++ ++ + V
Sbjct: 733 EGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPV 792
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+D Y KC + A +VF I K+ VSW +M+ Y +N ++F ++E
Sbjct: 793 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES- 851
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ +L AC +A LE+GR +H ++ + V +AL+DMY KCGS+ A +
Sbjct: 852 RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARL 911
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
F+ +PE++L+ W +I G G + A+++F++M R + P+ +T +L ACS
Sbjct: 912 LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKM---RIAGIKPDEITFTSILYACSH 968
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+G + +G F SM + ++P EHYAC+VDLL R G + +AY +I+ MP++P ++WG
Sbjct: 969 SGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWG 1028
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL CR++ EL A+++F+L+P+++G +VLL+N++A +WEE +R+ + G
Sbjct: 1029 ALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRG 1088
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK GCSWI V+ + F + DT+H + I ++L LR +MK G+ P +AL +
Sbjct: 1089 LKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAG 1148
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+ EK + HSEK+A+AFG++ +P G IR+ KNLR+C DCH KF+S RE+I+R
Sbjct: 1149 DMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILR 1208
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D+NRFH F DG+CSC D+W
Sbjct: 1209 DSNRFHHFKDGFCSCRDFW 1227
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 206/397 (51%), Gaps = 5/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ I+ N +TF C+ K + L K++H K G V S Y K+G
Sbjct: 544 MQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGE 603
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A K+FDE+ +R++ +WN+ IS V+ G +A++ F+ + DL T + A
Sbjct: 604 VDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAA 663
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L LGR LHG V++ F V N L+D Y KC + A F+ + K VSW
Sbjct: 664 CANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ YV+ ++ ++F +GV P + ++SVL ACA L+ GR VH K
Sbjct: 724 TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK 783
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + V +AL+DMY KCGS+++A + F+++P +++V WN +IGGY+ + AL
Sbjct: 784 NNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKL 843
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM E+ P+ +T+ C+L AC A+E G I + L+ G ++D+
Sbjct: 844 FAEMQK---ESRPDGITMACLLPACGSLAALEIGRGI-HGCILRNGYSSELHVANALIDM 899
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + A + +P + I+ W +++ C ++G
Sbjct: 900 YVKCGSLVHARLLFDMIPEKDLIT-WTVMISGCGMHG 935
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 194/415 (46%), Gaps = 12/415 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN-LATWNAYISNAV 87
GK +H++ +G + +G MY G + ++FD + N + WN +S
Sbjct: 470 GKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYA 529
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G + +I F +++ G + TF L + + +++HG + + GF +
Sbjct: 530 KIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNT 589
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARR 205
V N L+ Y K EV A +FD + D++ VSW SM+ V N + + F + R
Sbjct: 590 VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
GV+ + S ++ACA + L LGR++H VKAC + + L+DMY KCG++ D
Sbjct: 650 VGVDLATLVNS--VAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLND 707
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A AF KM ++ +V W ++I Y +G D A+ F EM S P+ ++ VL AC
Sbjct: 708 AIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS--PDVYSMTSVLHAC 765
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ +++KG + ++ K + ++D+ + G ++ AY + ++P++ +S
Sbjct: 766 ACGNSLDKGRDV-HNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVS- 823
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVR 440
W ++ Y K L A ++ + + ++ + A G ++ R
Sbjct: 824 WNTMIGG---YSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGR 875
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E P+ T CL A +L G+ +H L++G ++ V + DMY K G
Sbjct: 847 MQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGS 905
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD +PE++L TW IS + G AI F +R G +PD ITF + L A
Sbjct: 906 LVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYA 965
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
CS LL G GF F+ +S CN
Sbjct: 966 CSHSGLLNEG---WGF-----FNSMISECN 987
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
SS+L CA L+ G+ VH+V + +G+ LV MY CG++++ F+ +
Sbjct: 455 SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILS 514
Query: 276 RNLV-CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
N V WN ++ YA G ++ F++M + N T C+L + G V +
Sbjct: 515 DNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG--NSYTFSCILKCFATLGRVGEC 572
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
+I + K G ++ ++G VD A+++ E+ R +S W ++++ C
Sbjct: 573 KRI-HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVS-WNSMISGCV 630
Query: 395 VYG 397
+ G
Sbjct: 631 MNG 633
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 323/595 (54%), Gaps = 36/595 (6%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P K+LHA +KSG H + D Y K GL DA K+FD +P+++ W +S
Sbjct: 24 PFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSA 83
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL--QLGRQLHGFLVRSGFD 143
L P A + + G +PD F + + AC++ + +LG+QLH + S F
Sbjct: 84 CNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFF 143
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY---------------- 187
+ V + LVD Y K + VFD I + + +SW +M+ Y
Sbjct: 144 EDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRES 203
Query: 188 ---------------VQNYEEENGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELG 231
VQ+ + +F+ RREGV D ++SSV+ ACA A ELG
Sbjct: 204 PFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG 263
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ VH V + E +F+ +ALVDMY KC + A+ F +M +++V W +II G A
Sbjct: 264 KQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQH 323
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A+ AL+ +++M + PN VT V ++ ACS G V KG +F SM +GI+P
Sbjct: 324 GLAEEALTLYDDMVLAGVK--PNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSL 381
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HY C++DL R+G +D A +I+ MP++P W ALL+AC+ +G ++ AD+L
Sbjct: 382 QHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLD 441
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L P D +++LLSN++A G WE +VRK M +KK G S + + +F A +
Sbjct: 442 LKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEA 501
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
S EI ++TKL EM+ GY+PDT+ L D++++EK ++ HSE++ALA+GL+
Sbjct: 502 SQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKA 561
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG IRI KNLR+CGDCH+ K IS I RE+ VRD R+H F DG CSC+D+W
Sbjct: 562 VPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 193/419 (46%), Gaps = 49/419 (11%)
Query: 3 RECISPNDFTFPCLFKASSAL---HIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-- 57
E + P+ F F L KA + L H+ + GKQLHA L S D V S DMY+K
Sbjct: 102 HEGLQPDHFVFSSLIKACANLGSVHVKL-GKQLHARFLLSPFFEDDVVKSSLVDMYAKFE 160
Query: 58 -----------------------------TGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+G K +A ++F E P +NL W A IS V
Sbjct: 161 LPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQ 220
Query: 89 GGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G +A+ F+ +RR G D + + + AC++ ++ +LG+Q+H ++ G++ +
Sbjct: 221 SGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLF 280
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ N LVD Y KC++V AK +F + K+ VSW S++V Q+ E ++ G
Sbjct: 281 ISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAG 340
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDA 266
V+P + ++ AC+ + + GR++ V+ + ++ + L+D++ + G + +A
Sbjct: 341 VKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEA 400
Query: 267 EIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
E MP + + W A++ H G+ MA+ + + ++ E +Y+ L + +
Sbjct: 401 ENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAG- 459
Query: 326 SRAGAVEKGMKIFYSMTLKYGIK-PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AG E + M +K K PG Y+CV LGR V A E PM+ I
Sbjct: 460 --AGMWENVSMVRKLMAVKEVKKVPG---YSCVD--LGREFQVFHAGE--ASQPMKDEI 509
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/529 (40%), Positives = 309/529 (58%), Gaps = 4/529 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + + YSK G + A ++FD M ER+L +WN I A+D F+ +R
Sbjct: 87 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 146
Query: 104 RTGGEPDLITFCAFLNACS-DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
G + T + L+AC +C L+ ++LH V++ D N+ V L+D Y KC +
Sbjct: 147 NEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 205
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
A VF+ + DK+ V+W SM+ YVQN E ++ A+R +E F +SSV+ AC
Sbjct: 206 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 265
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ +A L G+ +HAV K+ N+FV S+ VDMY KCGS++++ I F+++ E+NL WN
Sbjct: 266 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 325
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
II G+A + FE+M PN VT +LS C G VE+G + F M
Sbjct: 326 TIISGFAKHARPKEVMILFEKMQQDGMH--PNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 383
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
YG+ P HY+C+VD+LGRAGL+ AYE+IK +P PT S+WG+LL +CRVY EL
Sbjct: 384 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 443
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
+AA+ LF+L+P ++GNHVLLSN++AA +WEE RK ++D +KK G SWI +K++
Sbjct: 444 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 503
Query: 463 IHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
+H F ++ H R EI + L L + + GY P L+DVE +K + HSEK+
Sbjct: 504 VHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKL 563
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
AL FGL+ +P P+RI KNLRIC DCH K S R +IVRD NR
Sbjct: 564 ALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 173/329 (52%), Gaps = 7/329 (2%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ + + HG ++R +G+V++ N L++ Y KC V LA+ VFDG+++++
Sbjct: 60 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 119
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW +M+ +Y +N E +FL R EG + +F ISSVLSAC + +H +
Sbjct: 120 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 179
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+VK C++ N++VG+AL+D+Y KCG I+DA F M +++ V W++++ GY + + A
Sbjct: 180 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 239
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L + M E N TL V+ ACS A+ +G K +++ K G +
Sbjct: 240 LLLYRRAQRMSLEQ--NQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSA 296
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPN 415
VD+ + G + +Y I E+ + + +W +++ + +P+ I + + + + PN
Sbjct: 297 VDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 355
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+ LLS + TG EE K M+
Sbjct: 356 EVTFSSLLS-VCGHTGLVEEGRRFFKLMR 383
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 165/340 (48%), Gaps = 2/340 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E ++FT + A + K+LH L++K+ +++VG + D+Y+K G+
Sbjct: 145 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 204
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+ M +++ TW++ ++ V + A+ + +R E + T + + A
Sbjct: 205 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 264
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ + L G+Q+H + +SGF NV V + VD Y KC + + ++F + +KN W
Sbjct: 265 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 324
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA-V 239
+++ + ++ + +F +++G+ P + SS+LS C +E GR +
Sbjct: 325 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 384
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ N+ S +VD+ G+ G + +A +P + W +++ + ++A
Sbjct: 385 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAE 444
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ E++ + E N+V L + +A + + K K+
Sbjct: 445 VAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 484
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
++ +L CAR + ++ H ++ +EG++ + + L++ Y KCG ++ A F+ M
Sbjct: 55 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 114
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACS-RAGAV 331
ER+LV WN +IG Y AL F E MR E + T+ VLSAC A+
Sbjct: 115 LERSLVSWNTMIGLYTRNRMESEALDIFLE---MRNEGFKFSEFTISSVLSACGVNCDAL 171
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
E K + +++K I ++DL + G++ A ++ + M + +++ W +++
Sbjct: 172 E--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMV 227
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/586 (37%), Positives = 326/586 (55%), Gaps = 36/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P+ +T+PC+ KASS G Q+H LK G +++VG MY K
Sbjct: 111 MYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKS 170
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++ DE+P R++ +WN+ +S GR +A++ + +P+ T + L A
Sbjct: 171 LKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA 230
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ + + V K +F + K+ +SW
Sbjct: 231 VTNTT---------------------------------SDNVLYVKEMFLKLTKKSVISW 257
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ +YV N + ++ GVEP I SVL A ++ L LGR VH A +
Sbjct: 258 NVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAER 317
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+ + +AL+DMY KCG ++DA FN+M R++V W +II Y G A++
Sbjct: 318 KKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAV 377
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + P+ + V VL+ACS AG ++ G + ++++ + GI P EH+ACVVDL
Sbjct: 378 FAEMRNSGLN--PDSIAFVSVLAACSHAGLLDDG-RYYFNLMAECGITPKLEHFACVVDL 434
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D AY I++MP+ P VWG LL+ACRVY +G +AAD L L+P SG +
Sbjct: 435 LGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYY 494
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A GRW + +R M+ GIKK G S + + + +H F A D SH ++ +I
Sbjct: 495 VLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIY 554
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L +MK GY+P+T+ AL+DVEEE+K + HSEK+A+AF +I PG PIR+T
Sbjct: 555 EELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVT 614
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH A K IS I RE+I+RD +RFH F +G CSC DYW
Sbjct: 615 KNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 3/197 (1%)
Query: 131 RQLHGFLVRSGF-DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++LHG ++ + N SV L+ Y C E GLA+ +FD I DKN V + M+ YV
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N+ ++ ++ T +G P + VL A +R L +G +H +K ++ N++V
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+ L+ MYGKC S+++A+ +++P R++V WN+++ YA G + AL EM ++
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNL 217
Query: 310 EAVPNYVTLVCVLSACS 326
+ PN T+ +L A +
Sbjct: 218 K--PNDCTMASLLPAVT 232
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 336/612 (54%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ FTFP L K + GK L A+K G ++FV + M+S L D A
Sbjct: 103 IKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLAR 162
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD + TWN +S + K + FI + + G P+ +T L+ACS
Sbjct: 163 KVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLK 222
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------------ 161
L+ G+ ++ ++ + N+ + N L+D + C E
Sbjct: 223 DLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVT 282
Query: 162 -------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
+ LA+ FD I +++ VSW +M+ Y++ +F + V+P +F
Sbjct: 283 GFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFT 342
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ S+L+ACA + LELG V K ++ + FVG+AL+DMY KCG++ A+ F +M
Sbjct: 343 MVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH 402
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
++ W A+I G A GH + AL+ F M + P+ +T + VL AC+ AG VEKG
Sbjct: 403 HKDKFTWTAMIVGLAINGHGEEALAMFSNM--IEASITPDEITYIGVLCACTHAGMVEKG 460
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
F SMT+++GIKP HY C+VDLLGRAG ++ A+E+I MP++P VWG+LL ACR
Sbjct: 461 QSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACR 520
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
V+ +L +AA + +L+P + +VLL N++AA RWE VRK M + GIKK GC
Sbjct: 521 VHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGC 580
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S + + ++ F A D SH ++ EI A L + +++ AGY PDT+ D+ EE+K T
Sbjct: 581 SLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETA 640
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+A+ LI+ PG+ IRI KNLR+C DCH K +S RE+IVRD RFH
Sbjct: 641 LYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHH 700
Query: 575 FWDGYCSCSDYW 586
F G CSC+++W
Sbjct: 701 FRHGSCSCNNFW 712
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 33/402 (8%)
Query: 30 KQLHALALKSGQIHDVFVG--CSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+H+ +K G D AF ++G A ++FD +P+ L WN I
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+N + ++ + + +PD TF L + LQ G+ L V+ GFD N+
Sbjct: 84 RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V + + C V LA+ VFD V+W ML Y + + + +F+ + G
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P + +LSAC+++ LE G+ ++ VE N+ + + L+DM+ CG + +A+
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--------TSM---------RCE 310
F+ M R+++ W +I+ G+A+ G D+A F+++ T+M E
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323
Query: 311 AV------------PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
A+ P+ T+V +L+AC+ GA+E G + + K IK ++
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALI 382
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
D+ + G V +A ++ KEM + + W A++ + G E
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFT-WTAMIVGLAINGHGE 423
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 41/386 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHA----------LALKSGQIHDVFVGC- 49
M + +SPN T + A S L GK ++ L L++ I D+F C
Sbjct: 199 MEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI-DMFAACG 257
Query: 50 ------SAFDM---------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
S FD ++ G D A K FD++PER+ +W A I +
Sbjct: 258 EMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLR 317
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R A+ F ++ + +PD T + L AC+ L+LG + ++ ++ + V
Sbjct: 318 MNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFV 377
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+D Y KC VG AK VF + K+ +W +M+V N E MF +
Sbjct: 378 GNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASI 437
Query: 209 EPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P + VL AC +E G+S ++ ++ ++ N+ +VD+ G+ G +++A
Sbjct: 438 TPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAH 497
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
MP + N + W +++G + +A + +++ + E YV L + +AC
Sbjct: 498 EVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACK 557
Query: 327 RAGAVEKGMKIFYSMTLKYGIK--PG 350
R + + K+ ++ GIK PG
Sbjct: 558 RWENLRQVRKLM----MERGIKKTPG 579
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 322/579 (55%), Gaps = 36/579 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T+PC+ KA S G +H LK G ++FVG MY K G +A ++
Sbjct: 117 PDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRV 176
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDEM +++ +WN+ ++ R +A++ + G +PD T + + A ++ S
Sbjct: 177 FDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS-- 234
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
V + +F + KN +SW M+ VY
Sbjct: 235 -------------------------------SENVLYVEKIFVNLERKNLISWNVMIRVY 263
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
++N ++L + VEP +SVL AC ++ L LGR +H K + N+
Sbjct: 264 MKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL 323
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ ++L+DMY +CG + DA+ F++M R++ W ++I Y G A++ F EM +
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEM--L 381
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
P+ + V +LSACS +G +++G F MT Y I P EHYAC+VDLLGRAG V
Sbjct: 382 NSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRV 441
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D AY IIK+MP+ P VW LL++CRV+ ++G +AADNL +L P SG +VLLSN++
Sbjct: 442 DEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIY 501
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A GRW+E +R MK I+K G S + + N++H F A DTSH ++ EI L L
Sbjct: 502 AKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLV 561
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+MK GY+P+T+ AL+DVEEE+K + HSEK+A+ F L+ IRITKNLR+CG
Sbjct: 562 AKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCG 620
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K IS IV RE+IVRD NRFH F DG CSC DYW
Sbjct: 621 DCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 24/358 (6%)
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
L +F A ++ ++LH + N S+ L+ Y C E GL + VFD
Sbjct: 18 LTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD 77
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ D+N V + M+ YV N+ ++G +F G P ++ VL AC+ L
Sbjct: 78 EMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY 137
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G +H +K ++ N+FVG+ L+ MYGKCG + +A F++M +++V WN+++ GYAH
Sbjct: 138 GLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAH 197
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA--VEKGMKIFYSMTLKYGIK 348
D AL EM + P+ T+ ++ A + + V KIF ++ K I
Sbjct: 198 NMRFDDALEICREMEDYGQK--PDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLIS 255
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIA 405
+ ++ + + L +A ++ +M + P + ++L AC LGR
Sbjct: 256 -----WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI 310
Query: 406 ADNL--FKLDPNDSGNHVLLSNMFAATGRWEEADLV--RKEMKDVGIKKGAGCSWISV 459
+ + KL PN + L+ +M+A G ++A V R + +DV SW S+
Sbjct: 311 HEYVEKKKLCPNLLLENSLI-DMYARCGCLDDAKRVFDRMKFRDVA-------SWTSL 360
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ TF + A L + G+++H K ++ + S DMY++ G DDA
Sbjct: 284 VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAK 343
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD M R++A+W + IS + G+ NA+ F + +G PD I F A L+ACS
Sbjct: 344 RVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSG 403
Query: 126 LLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
LL GR + + LVD G+ V A + + I+ N+ W ++
Sbjct: 404 LLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATL 463
Query: 184 L 184
L
Sbjct: 464 L 464
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 328/589 (55%), Gaps = 9/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E N TF A GK LH + G ++ +G + Y K
Sbjct: 356 MKKEI---NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHK 412
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP--DLITFCAFL 118
+A K+F MP+ + TWNA I A+ AF L R G D IT L
Sbjct: 413 MAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAF-KLMREGSTSGVDYITIVNIL 471
Query: 119 NAC-SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+C + L++ G +H V +GFD + V + L+ Y KC ++ + +FD ++ K
Sbjct: 472 GSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS 531
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
W +++ + E ++ + R G+E F S+ LS A +A LE G+ +H
Sbjct: 532 SVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGS 591
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+K E + F+ +A +DMYGKCG + DA + +R+ + WN +I A G A
Sbjct: 592 TIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKA 651
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+F +M ++ PN+V+ VC+LSACS G V++G+ + SMT YGI+PG EH C+
Sbjct: 652 KETFHDM--LKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCM 709
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+DLLGR+G + A I EMP+ P VW +LL +CR+Y +LGR AA +L +LDP+D
Sbjct: 710 IDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDD 769
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+VL SN+FA GRWE+ + VR +M I+K SW+ K I IF D +H +
Sbjct: 770 SAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQME 829
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
+I L L + + AGY+PDT+++L D +EE+K + HSE+IALAFGLI IP G +
Sbjct: 830 QINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTV 889
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+CGDCHS FKF+SG++GR++++RD RFH F +G CSCSDYW
Sbjct: 890 RIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 5/386 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVT-GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
I P+ F L A + I G Q H A+K G I+DVFVG S Y+ G+ +A
Sbjct: 54 IKPSGFMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNA 113
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
KMF+EMP+RN+ +W + + + G K I+ + +R G + +++C
Sbjct: 114 QKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFL 173
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ LG QL G ++ G + VS N L+ +G C ++ A +F+ + +++ +SW S++
Sbjct: 174 MDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSII 233
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
QN E + F R E +S +LS C + L+ G+ VH +AVK +E
Sbjct: 234 SANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
NI + + L+ +Y G +DAE+ F +MPER+L+ WN+++ Y G AL F EM
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M+ E NYVT L+AC G KI + + G++ ++ G+
Sbjct: 354 LWMKKEI--NYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKC 410
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
+ A ++ + MP ++ W AL+
Sbjct: 411 HKMAEAKKVFQRMPKLDKVT-WNALI 435
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 8/400 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H LA+K G ++ + + +YS G DA+ +F MPER+L +WN+ ++ V
Sbjct: 280 GKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQ 339
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR A+ F + E + +TF + L AC D G+ LHGF+V G + +
Sbjct: 340 DGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELII 399
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ FYGKC+++ AK VF + + V+W +++ + N E F R
Sbjct: 400 GNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGST 459
Query: 209 EPKDFM-ISSVLSACARIAGL-ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
D++ I ++L +C L + G +HA V + + V S+L+ MY KCG + +
Sbjct: 460 SGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSS 519
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F+++ + WNAII A G + AL M S E + LS +
Sbjct: 520 SYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEF--DQFNFSTALSVAA 577
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+E+G ++ + T+K G + +D+ G+ G +D A I+ + R +S W
Sbjct: 578 DLAMLEEGQQL-HGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLS-W 635
Query: 387 GALLNACRVYGKPELGRIAADNLFKL--DPNDSGNHVLLS 424
L++ +G+ + ++ KL PN LLS
Sbjct: 636 NTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 189/401 (47%), Gaps = 4/401 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E I N+ + + L + G QL ALK G V S M+ G
Sbjct: 151 MRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGD 210
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F+EM ER+ +WN+ IS + + F +R E + T L+
Sbjct: 211 INEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSI 270
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L+ G+ +HG V+ G + N+ +CN L+ Y A+++F + +++ +SW
Sbjct: 271 CGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISW 330
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SML YVQ+ ++F E +S L+AC G+ +H V
Sbjct: 331 NSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVV 390
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + +G+ L+ YGKC + +A+ F +MP+ + V WNA+IGG+A+ + A+++
Sbjct: 391 LGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAA 450
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSAC-SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ M V +Y+T+V +L +C + ++ G+ I ++ T+ G + ++
Sbjct: 451 FKLMREGSTSGV-DYITIVNILGSCLTHEDLIKYGIPI-HAHTVVTGFDLDQHVQSSLIT 508
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G + + I ++ + T SVW A++ A YG E
Sbjct: 509 MYAKCGDLHSSSYIFDQLVFK-TSSVWNAIIAANARYGFGE 548
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 170/343 (49%), Gaps = 6/343 (1%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYSK G + A +FD M ERN A+WN +S V G A+ F ++ G +P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 114 FCAFLNACSDCSLL-QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ + AC+ S++ + G Q HGF ++ G +V V V FY V A+ +F+ +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
D+N VSW S++V Y N ++ + R EG+ + I+ V+S+C + + LG
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+ A+K +E + ++L+ M+G CG I +A FN+M ER+ + WN+II A
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ + F M + E NY TL +LS C ++ G K + + +KYG++
Sbjct: 241 LHEESFRYFHWMRLVHEEI--NYTTLSILLSICGSVDYLKWG-KGVHGLAVKYGLESNIC 297
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
++ + AG A I + MP R IS W ++L AC V
Sbjct: 298 LCNTLLSVYSDAGRSKDAELIFRRMPERDLIS-WNSML-ACYV 338
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/585 (38%), Positives = 331/585 (56%), Gaps = 8/585 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R+C +P L +S I +++HA KS D F+G Y+K G +
Sbjct: 33 RQCATPEAIVSALLIAVNSCPSIS-NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAE 91
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAFLNAC 121
DA K+FD+MP ++L +WN+ IS ++ AF ++ +P+ +T + ++AC
Sbjct: 92 DALKLFDDMPHKDLVSWNSLISG--FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISAC 149
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S L G+ +HGF ++ G V V N L++ YGK ++ A +F+ I D N VSW
Sbjct: 150 SGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWN 207
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
S++ V N G F RR G+E + I ++L AC + +L S+H +
Sbjct: 208 SIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCT 267
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
I + +AL+D Y K G + + F ++ + V W A++ GYA G A+ F
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E M + E P++VT +LSACS +G V +G F M+ YGI+P +HY+C+VDLL
Sbjct: 328 ESMANKGLE--PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLL 385
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GR GL++ AYE+I+ MPM P VWGALL ACRV+G ELG+ A++L ++P D N++
Sbjct: 386 GRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYI 445
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
+LSNM++A+ W++A VR +K+ G+K+ G S I N+ H F D SH +I +
Sbjct: 446 MLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYS 505
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +L +++ AGY T + L DVEEE K + HSEK+A+AFGL+ G + ITK
Sbjct: 506 KLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITK 565
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLRICGDCHS K IS I R +I+RD RFH F DG+CSC+DYW
Sbjct: 566 NLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 40/281 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I ++ T L +A L + + +H L +G + + + D Y+K G
Sbjct: 229 MRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGR 288
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +F E+ + W A ++ G + AI F ++ G EPD +TF L+A
Sbjct: 289 LSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSA 348
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L+ G+ + G + V + +VD G+C GL ++
Sbjct: 349 CSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC---GLLNDAYE--------- 396
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV--HAV 237
+QN +EP + ++L AC +ELG+ V H +
Sbjct: 397 -------VIQNMP---------------MEPNAGVWGALLGACRVHGNIELGKEVAEHLI 434
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
++ N + L +MY S +DA + ER L
Sbjct: 435 NMEPLDPRNYIM---LSNMYSASRSWKDAAKVRALLKERGL 472
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 347/652 (53%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +P FT + + + G+++H+ +K G V V S +MY K G
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
+ A +F+ MP R++++WNA +S NA++ G +N
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274
Query: 95 AIDAFI------NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+DA L + PD T + L+AC++ +++G+Q+H +++R+ N V
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 149 CNGLVDFYGKCNEVGLAKVVFD--------------------------------GIIDKN 176
N L+ Y K V A+ + D G+++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 177 DV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
DV +W +M+V Y QN + +F + G EP + +++VLS CA +A L+ G+ +H
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHA 294
A+++ +E + V +A++ MY + GS A F+++ R + W ++I A G
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FEEM +R P+ +T V VLSACS AG V +G + + + ++ I P HY
Sbjct: 515 EEAVGLFEEM--LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDLL RAGL A E I+ MP+ P WG+LL+ACRV+ EL +AA+ L +DP
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
N+SG + ++N+++A GRW +A + K K+ ++K G SW ++++IH+F A D H
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 692
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ + AM ++ EE+K AG++PD L+DV++E K + HSEK+A+AFGLI+ P
Sbjct: 693 QRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 752
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+C DCH+A K IS + RE+IVRD RFH F DG CSC DYW
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 186/422 (44%), Gaps = 68/422 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+VF S M++K+G DA +F EMPER+ +W + GR AI +++
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE-- 161
G P T L++C+ +GR++H F+V+ G V V N +++ YGKC +
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 162 -----------------------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+ LA+ +F+ + D++ VSW +M+ Y QN
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276
Query: 193 EENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ ++F E + P +F I+SVLSACA + + +G+ VHA ++ + N V +
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336
Query: 252 ALVDMYGKCGSIQDAE-------------IAFNKMPE--------------------RNL 278
AL+ Y K GS+++A I+F + E R++
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V W A+I GY G D A+ F M + C PN TL VLS C+ ++ G +I
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQI- 453
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ ++ ++ + ++ + R+G A + ++ R W +++ A +G+
Sbjct: 454 HCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Query: 399 PE 400
E
Sbjct: 514 GE 515
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 49/239 (20%)
Query: 218 VLSACARIAGLELGRSVHAVAVKA------------------------------------ 241
+L C A GR++HA AVKA
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 242 -CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N+F ++L+ M+ K G + DA F +MPER+ V W ++ G G A+ +
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSAC--SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+MT+ P TL VLS+C ++AGAV G K+ +S +K G+ V+
Sbjct: 152 LLDMTADGF--TPTQFTLTNVLSSCAVTQAGAV--GRKV-HSFVVKLGLGSCVPVANSVL 206
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
++ G+ G + A + + MP+R ++S W A+++ G+ +L A++LF+ P+ S
Sbjct: 207 NMYGKCGDSETATTVFERMPVR-SVSSWNAMVSLNTHLGRMDL----AESLFESMPDRS 260
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 347/652 (53%), Gaps = 68/652 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +P FT + + + G+++H+ +K G V V S +MY K G
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
+ A +F+ MP R++++WNA +S NA++ G +N
Sbjct: 215 AETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQN 274
Query: 95 AIDAFI------NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+DA L + PD T + L+AC++ +++G+Q+H +++R+ N V
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 149 CNGLVDFYGKCNEVGLAKVVFD--------------------------------GIIDKN 176
N L+ Y K V A+ + D G+++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 177 DV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
DV +W +M+V Y QN + +F + G EP + +++VLS CA +A L+ G+ +H
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN-LVCWNAIIGGYAHQGHA 294
A+++ +E + V +A++ MY + GS A F+++ R + W ++I A G
Sbjct: 455 CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ FEEM +R P+ +T V VLSACS AG V +G + + + ++ I P HY
Sbjct: 515 EEAVGLFEEM--LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDLL RAGL A E I+ MP+ P WG+LL+ACRV+ EL +AA+ L +DP
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
N+SG + ++N+++A GRW +A + K K+ ++K G SW ++++IH+F A D H
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 692
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ + AM ++ EE+K AG++PD L+DV++E K + HSEK+A+AFGLI+ P
Sbjct: 693 QRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEK 752
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+C DCH+A K IS + RE+IVRD RFH F DG CSC DYW
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 68/422 (16%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+VF S M++K+G DA +F EMPER+ +W + GR AI +++
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE-- 161
G P T L++C+ +GR++H F+V+ G V V N +++ YGKC +
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 162 -----------------------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+ LA+ +F+ + ++ VSW +M+ Y QN
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276
Query: 193 EENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ ++F E + P +F I+SVLSACA + + +G+ VHA ++ + N V +
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336
Query: 252 ALVDMYGKCGSIQDAE-------------IAFNKMPE--------------------RNL 278
AL+ Y K GS+++A I+F + E R++
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V W A+I GY G D A+ F M + C PN TL VLS C+ ++ G +I
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQI- 453
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ ++ ++ + ++ + R+G A + ++ R W +++ A +G+
Sbjct: 454 HCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Query: 399 PE 400
E
Sbjct: 514 GE 515
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 49/239 (20%)
Query: 218 VLSACARIAGLELGRSVHAVAVKA------------------------------------ 241
+L C A GR++HA AVKA
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 242 -CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N+F ++L+ M+ K G + DA F +MPER+ V W ++ G G A+ +
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSAC--SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+MT+ P TL VLS+C ++AGAV G K+ +S +K G+ V+
Sbjct: 152 LLDMTADGF--TPTQFTLTNVLSSCAVTQAGAV--GRKV-HSFVVKLGLGSCVPVANSVL 206
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
++ G+ G + A + + MP+R ++S W A+++ G+ +L A++LF+ P S
Sbjct: 207 NMYGKCGDAETASTVFERMPVR-SVSSWNAMVSLNTHLGRMDL----AESLFESMPGRS 260
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/655 (35%), Positives = 344/655 (52%), Gaps = 79/655 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTG----KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+ P+D++F L S+A H+P QL LKSG + V + +Y K
Sbjct: 153 LRPDDYSFTALL--SAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 62 D---DADKMFDEMPERNLATW-------------------------------NAYISNAV 87
+ DA K+ DEMP+++ TW NA IS V
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR--SGF--D 143
G A + F + D TF + L+AC++ G+ +HG + R F +
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---------YEE- 193
+ V N LV Y KC + +A+ +FD + K+ VSW ++L YV++ +EE
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390
Query: 194 ---------------------ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
E+ ++F R E V+P D+ + +SAC + L+ G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H V+ EG+ G+AL+ MY +CG++++A + F MP + V WNA+I G
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
H AL F+ M + E + P+ ++ + VL+AC+ +G V++G + F SM +GI PG
Sbjct: 511 HGREALELFDRMVA---EGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGE 567
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HY ++DLLGRAG + A ++IK MP PT S+W A+L+ CR G ELG AAD LFK
Sbjct: 568 DHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
+ P G ++LLSN ++A GRW +A VRK M+D G+KK GCSWI N++H+F DT
Sbjct: 628 MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDT 687
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
H ++ L + M+ GY+PDT L+D+E +K + HSE++A+ FGL+ +
Sbjct: 688 KHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKL 747
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PPG + + KNLRIC DCH+ F+S VGRE++VRD RFH F DG CSC +YW
Sbjct: 748 PPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 166/415 (40%), Gaps = 74/415 (17%)
Query: 55 YSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDL 111
Y+ G A FD +P+ R+ NA IS A+ F +L +G PD
Sbjct: 98 YAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157
Query: 112 ITFCAFLNACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKCN--------- 160
+F A L+A + + QL +++SG G +SV N LV Y KC
Sbjct: 158 YSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDAR 217
Query: 161 -------------------------EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
+VG A+ VF+ + K DV W +M+ YV +
Sbjct: 218 KVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVE 277
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA----CVEGNIFVGS 251
++F E V +F +SVLSACA G+SVH + E + V +
Sbjct: 278 AFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNN 337
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------- 304
ALV +Y KCG+I A F+ M +++V WN I+ GY D A+ FEEM
Sbjct: 338 ALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELS 397
Query: 305 ---------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
MR E V P T +SAC G+++ G K +
Sbjct: 398 WMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG-KQLHGHL 456
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ G + ++ + R G V A + MP ++S W A+++A +G
Sbjct: 457 VQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS-WNAMISALGQHG 510
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P D+T+ A L GKQLH ++ G G + MY++ G
Sbjct: 421 MRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGA 480
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A+ MF MP + +WNA IS G + A++ F + G PD I+F L A
Sbjct: 481 VKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK 166
C+ L+ G Q + R G L+D G+ +G A+
Sbjct: 541 CNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 41/282 (14%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
LV Y + A FD + ++ V +++ Y + +F + G
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 208 -VEPKDFMISSVLSACARIAGLELGR--SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ P D+ +++LSA + + + + +K+ G + V +ALV +Y KC +++
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211
Query: 265 ---DAEIAFNKMPERNLVCWNAIIGGYAHQG----------------------------H 293
DA ++MP+++ + W ++ GY +G H
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271
Query: 294 ADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMT-LKYGIKPGA 351
+ M + +FE M E VP + T VLSAC+ AG G + +T L+ P A
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331
Query: 352 EHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+V L + G + A I M + +S W +L+
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVS-WNTILS 372
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 324/547 (59%), Gaps = 28/547 (5%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +FD+MPER+L +WN ++ V K A F + E D++++ A L+
Sbjct: 12 DLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM----PERDIVSWNAMLSGY 67
Query: 122 SDCSLLQLGRQL-HGFLVRSGFDGN----VSVCNGLVDFYGKCNE--------------- 161
+ + R++ + +++G N V NG ++ + E
Sbjct: 68 AQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMG 127
Query: 162 --VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
V + +FD + ++ +SW +M+ Y QN E F+ +R+ + L
Sbjct: 128 GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCAL 187
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
S C+ IA LELGR +H VKA + +VG+AL+ MY KCGSI +A AF ++ E+++V
Sbjct: 188 STCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVV 247
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
WN +I GYA G + AL+ FE M + P+ T+V VL+ACS AG V++G + FY
Sbjct: 248 SWNTMIHGYARHGFGEEALTVFELMKTTGIR--PDDATMVSVLAACSHAGLVDQGSEYFY 305
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
SM YGI HY C+VDLLGRAG ++ A ++K MP P + WGALL A R++G
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNT 365
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
ELG AA +F+++P++SG ++LLS ++AA+GRW +A +R EM++ G+KK G SW+ V
Sbjct: 366 ELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEV 425
Query: 460 KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHS 519
+N+IH F+ DTSH +I L ++ ++K GYI TN +DVEEEEK+ + +HS
Sbjct: 426 QNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHS 485
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+A+G++ IP G PIR+ KNLR+C DCH+A K+IS IVGR +I+RDN+RFH F G
Sbjct: 486 EKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGS 545
Query: 580 CSCSDYW 586
CSC D+W
Sbjct: 546 CSCRDFW 552
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 28/301 (9%)
Query: 55 YSKTGLKDDADK--------------------------MFDEMPERNLATWNAYISNAVL 88
Y + G +DA + +FD MP+R+ +W+A I+
Sbjct: 98 YVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQ 157
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A+ F+ ++R + +F L+ CS+ + L+LGRQLH LV++G+ V
Sbjct: 158 NGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYV 217
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ Y KC + A+ F I++K+ VSW +M+ Y ++ E +F + G+
Sbjct: 218 GNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGI 277
Query: 209 EPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P D + SVL+AC+ ++ G +++ + + + +VD+ G+ G +++A+
Sbjct: 278 RPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQ 337
Query: 268 IAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
MP E + W A++G G+ ++ + + + M Y+ L + +A
Sbjct: 338 NLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASG 397
Query: 327 R 327
R
Sbjct: 398 R 398
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+C N +F C S + G+QLH +K+G +VG + MY K G
Sbjct: 171 MQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGS 230
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A F E+ E+++ +WN I G + A+ F ++ TG PD T + L A
Sbjct: 231 IDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAA 290
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + R G + +VD G+ ++ A+ + + + +
Sbjct: 291 CSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAA 350
Query: 179 SWCSML 184
+W ++L
Sbjct: 351 TWGALL 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 42/277 (15%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
++ Y + ++ LA+ +FD + +++ SW ML YV+N + + +F E + +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALF-----ERMPER 55
Query: 212 DFM-ISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI- 268
D + +++LS A+ ++ R + + + +K + N L+ Y + G I+DA+
Sbjct: 56 DIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWN-----GLLAAYVQNGRIEDAKRL 110
Query: 269 -------------------------AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
F+ MP+R+ + W+A+I GY+ G ++ AL F E
Sbjct: 111 FESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVE 170
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M CE + N + C LS CS A+E G ++ + +K G + G ++ + +
Sbjct: 171 MQR-DCERL-NRSSFTCALSTCSNIAALELGRQL-HCRLVKAGYQTGWYVGNALLAMYCK 227
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G +D A + +E+ + +S W +++ +G E
Sbjct: 228 CGSIDEARDAFQEILEKDVVS-WNTMIHGYARHGFGE 263
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 324/588 (55%), Gaps = 33/588 (5%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K +HA +++ I DVF + L D A ++F ++ NL +N++I
Sbjct: 32 KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P + ++ +R G PD +T+ + AC+ L +G Q HG ++R GFD +V V
Sbjct: 92 KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQ 151
Query: 150 NGLVDFYG-------------------------------KCNEVGLAKVVFDGIIDKNDV 178
N LV Y K +V A+ +FD + +KN V
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W M+ Y +N + +++ + EGV + ++ SV+++CA + LELG H
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ + N+ +G+ALVDMY +CGSI A F+++P R+ + W +I G+A G+A+ AL
Sbjct: 272 LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKAL 331
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M + P +T VLSACS G VE+G+++F SM Y I+P EHY C+V
Sbjct: 332 EYFSRME--KAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMV 389
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG + A + + EMPM+P +WGALL ACR++ E+ A L +L P SG
Sbjct: 390 DLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSG 449
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSN++A T +WE + +R+ MK+ G+ K G + + ++H F D +H +
Sbjct: 450 YYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQ 509
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I+ M ++ +++ AGY + + AL+D++EEEK + + HSEK+A+A+ ++ PIR
Sbjct: 510 IERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIR 569
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+C DCH+A K IS + RE+IVRD NRFH F G CSC DYW
Sbjct: 570 IVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 164/364 (45%), Gaps = 33/364 (9%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS----- 56
+R + P++ T+P L KA + G Q H ++ G DV+V S MYS
Sbjct: 105 KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDI 164
Query: 57 --------------------------KTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
K+G A K+FD+MPE+NL TW+ IS
Sbjct: 165 KSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNS 224
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
AI+ + L+ G + + + +C+ L+LG + H +++R+ N+ +
Sbjct: 225 FFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGT 284
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
LVD Y +C + A VFD + ++ +SW +++ + + E + F + G+ P
Sbjct: 285 ALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTP 344
Query: 211 KDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
++ ++VLSAC+ +E G + ++ +E + +VD+ G+ G + +AE
Sbjct: 345 REITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKF 404
Query: 270 FNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
N+MP + N W A++G ++++A + + + ++ E YV L + + ++
Sbjct: 405 VNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKW 464
Query: 329 GAVE 332
VE
Sbjct: 465 ENVE 468
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 137/314 (43%), Gaps = 34/314 (10%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+FL +C+ S L++ +H L+R+ +V + L+ N + A VF I +
Sbjct: 20 SFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP 76
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N + S + + + + + ++ ++R G+ P + ++ AC + L++G H
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ + +++V ++LV MY G I+ A F ++ ++V W +++ GY G
Sbjct: 137 GQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVT 196
Query: 296 MALSSFEEMTS----------------------------MRCEAV-PNYVTLVCVLSACS 326
A F++M ++ E V N +V V+++C+
Sbjct: 197 SARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCA 256
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
GA+E G + + L+ + +VD+ R G +D+A + ++P R +S W
Sbjct: 257 HLGALELGERA-HDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALS-W 314
Query: 387 GALLNACRVYGKPE 400
L+ ++G E
Sbjct: 315 TTLIAGFAMHGYAE 328
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ E + N+ + + + L G++ H L++ ++ +G + DMY++ G
Sbjct: 236 LQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGS 295
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++P R+ +W I+ + G + A++ F + + G P ITF A L+A
Sbjct: 296 IDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSA 355
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ G +L + R + + +VD G+ ++ A K V + + N
Sbjct: 356 CSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAP 415
Query: 179 SWCSML 184
W ++L
Sbjct: 416 IWGALL 421
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 326/559 (58%), Gaps = 3/559 (0%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
GK +H + SG D DMY+K G A ++FD ++ TWN+ I+
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G K +++F + + +PD +TF L+ S + + GR +H +++ GF+ +
Sbjct: 400 QSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ N L+D Y KC E+ VF + + +SW +++ V + G QM R EG
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEG 518
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + +L C+ +A G+ +H K+ E N+ +G+AL++MY KCGS+++
Sbjct: 519 LMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCI 578
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F M E+++V W A+I + G AL +F++M +P+ V + + ACS
Sbjct: 579 KVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDME--LSGVLPDSVAFIAFIFACSH 636
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+G V++G++ F M Y ++P EHYACVVDLL R+GL+ +A E I MPM+P S+WG
Sbjct: 637 SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL+ACR G + + + + +L+ +D+G +VL+SN++A G+W++ VR MK G
Sbjct: 697 ALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKG 756
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK G SWI ++ R+++F+ D S E+ +++ +L L M GY+ D FAL+DVE
Sbjct: 757 LKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVE 816
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E++K + HSE++A+AFGL+ PG P+ + KNLR+CGDCH+ K+I+ I+ RE++VR
Sbjct: 817 EDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVR 876
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFHRF DG CSC D+W
Sbjct: 877 DANRFHRFKDGACSCGDHW 895
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 6/390 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P+ FTFP + + + + G +H A++ G D+++G + DMYS+
Sbjct: 112 MREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVD 171
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +F+EM R+ +WN+ IS G ++A+D + R TG PD T + L A
Sbjct: 172 LDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLA 231
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C ++ G +HG + + G G+V + NGL+ Y K + A+ VF + K+ V+W
Sbjct: 232 CGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTW 291
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y Q E ++F+ +G P I+S + AC + L++G+ VH +
Sbjct: 292 NTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIG 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ E + + L+DMY KCG + A+ F+ ++ V WN++I GY G+ L S
Sbjct: 351 SGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLES 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M+ E P+ VT V +LS S+ + +G I + +K+G + ++D+
Sbjct: 411 FK---MMKMERKPDSVTFVLLLSIFSQLADINQGRGI-HCDVIKFGFEAELIIGNSLLDV 466
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +D ++ M IS W ++
Sbjct: 467 YAKCGEMDDLLKVFSYMSAHDIIS-WNTVI 495
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 9 NDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
+F L K SSA + P + +H+L + SG V Y++ + +
Sbjct: 18 QEFLRSSLLKTLSSAKNTPQL-RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSV 76
Query: 68 FDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F + P N+ WN+ I G A+ + +R +PD TF + +N+C+
Sbjct: 77 FRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILD 136
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+LG +H + GF+ ++ + N L+D Y + ++ A+ VF+ + +++ VSW S++
Sbjct: 137 LELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISG 196
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y N E+ M+ R G+ P F +SSVL AC + ++ G +VH V K + G+
Sbjct: 197 YCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGD 256
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ +G+ L+ MY K +++A F+KM ++ V WN +I GYA G + ++ F +M
Sbjct: 257 VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID 316
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE--HYAC--VVDLLG 362
VP+ +++ + AC ++G ++ G KY I G E AC ++D+
Sbjct: 317 ---GFVPDMLSITSTIRACGQSGDLQVG-----KFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN-DSGNHV 421
+ G + A E+ + +++ W +L+N G + G + + + K++ DS V
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVT-WNSLINGYTQSGYYKEG-LESFKMMKMERKPDSVTFV 426
Query: 422 LLSNMFA 428
LL ++F+
Sbjct: 427 LLLSIFS 433
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 147/334 (44%), Gaps = 5/334 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF L S L G+ +H +K G ++ +G S D+Y+K G DD K+
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKV 479
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F M ++ +WN I+++V +R G PD T L CS ++
Sbjct: 480 FSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVR 539
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ G+++HG++ +SGF+ NV + N L++ Y KC + VF + +K+ V+W +++ +
Sbjct: 540 RQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAF 599
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGN 246
E + + F GV P + + AC+ ++ G R + +E
Sbjct: 600 GMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPR 659
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +VD+ + G + AE MP + + W A++ +G+ ++A +++
Sbjct: 660 MEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL 719
Query: 306 SMRCEAVPNYV---TLVCVLSACSRAGAVEKGMK 336
+ + YV + L + V MK
Sbjct: 720 ELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMK 753
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + P++ T + S L + GK++H KSG +V +G + +MYSK G
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ K+F M E+++ TW A IS + G K A+ AF ++ +G PD + F AF+ A
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633
Query: 121 CSDCSLLQLG 130
CS +++ G
Sbjct: 634 CSHSGMVKEG 643
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 331/617 (53%), Gaps = 33/617 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++ + F+FP L KA S + V G ++H LA K G D FV MY+ G
Sbjct: 113 MRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGR 172
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A MFD+M R++ TW+ I G +A+ F ++ EPD + L+A
Sbjct: 173 IAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSA 232
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---------------- 164
C L G+ +H F++ + + + + LV Y C + L
Sbjct: 233 CGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVAS 292
Query: 165 ---------------AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
A+ VF+ ++ K+ V W +M+ Y ++ + +F + G++
Sbjct: 293 TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P + SV++ACA + L+ + +H K G + + +AL++MY KCGS++ A
Sbjct: 353 PDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRI 412
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+KMP +N++ W +I +A G A AL F +M E PN +T V VL ACS AG
Sbjct: 413 FDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE--PNGITFVGVLYACSHAG 470
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G KIFYSM ++ I P HY C+VDL GRA L+ A E+++ MP+ P + +WG+L
Sbjct: 471 LVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSL 530
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+ ACRV+G+ ELG AA L +LDP+ G HV LSN++A RWE+ VRK MK GI
Sbjct: 531 MAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGIS 590
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCS + N IH F D SH+ EI L ++ ++K GY P+T L D+EEE
Sbjct: 591 KERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEE 650
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK V HSEK+AL +GL+ G IRI KNLR+C DCH+ K S + RE++VRD
Sbjct: 651 EKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDR 710
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH + DG CSC DYW
Sbjct: 711 TRFHHYKDGVCSCKDYW 727
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 44/419 (10%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD---KMFD 69
F L A+S H+ KQ+HA L+S D + S L D +F+
Sbjct: 27 FSALSSATSLTHL----KQVHAQILRSKL--DRSTSLLVKLVISSCALSSSLDYALSVFN 80
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+P+ N ++ P+ + + +R G D +F L A S L
Sbjct: 81 LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G ++HG + GFD + V GLV Y C + A+++FD + ++ V+W M+ Y Q
Sbjct: 141 GLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQ 200
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + +F + VEP + M+S+VLSAC R L G+ +H ++ + + +
Sbjct: 201 SGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHL 260
Query: 250 GSALVDMYGKCGS-------------------------------IQDAEIAFNKMPERNL 278
SALV MY CGS I++A FN+M +++L
Sbjct: 261 QSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL 320
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
VCW+A+I GYA AL+ F EM S+ + P+ VT++ V++AC+ GA+++ K
Sbjct: 321 VCWSAMISGYAESDSPQEALNLFNEMQSLGIK--PDQVTMLSVITACAHLGALDQA-KWI 377
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ K G ++++ + G ++RA I +MP + IS W +++A ++G
Sbjct: 378 HLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVIS-WTCMISAFAMHG 435
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 320/566 (56%), Gaps = 2/566 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR PN F + KA+ L V GK +H A+K+ + VG + DMY+K G
Sbjct: 254 MRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA F+ +P ++ + IS + + A + F+ L R+ P+ + + L A
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L G+Q+H ++ G + ++ V N L+DFY KCN++ + +F + D N+VSW
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V + Q+ E +F + + SSVL ACA A + +H K
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +G++L+D Y KCG I+DA F + ER+++ WNAII GYA G A AL
Sbjct: 494 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 553
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M E+ N +T V +LS CS G V G+ +F SM + +GIKP EHY C+V L
Sbjct: 554 FDRMNKSNVES--NDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A + I ++P P+ VW ALL++C ++ LGR +A+ + +++P D +
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 671
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSNM+AA G ++ L+RK M+++G++K G SW+ +K IH F H I
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVIN 731
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
AML L + GYIPD N L+DV++E+K + HSE++ALA+GL+ PPG PIRI
Sbjct: 732 AMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRIL 791
Query: 541 KNLRICGDCHSAFKFISGIVGREVIV 566
KNLR C DCH+AF IS IV RE+IV
Sbjct: 792 KNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 16/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E N F + K + A+ +H+ A K G H+ FVG D YS L
Sbjct: 153 LRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F+ + ++ W A +S P+NA F +R +G +P+ + L A
Sbjct: 213 VSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ LG+ +HG +++ D V L+D Y KC ++ A++ F+ +I +DV
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE-MIPYDDVIL 331
Query: 181 CSMLVV-YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
S ++ Y Q+ + E ++FL R V P ++ +SSVL AC + L+ G+ +H A+
Sbjct: 332 LSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI 391
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E ++FVG+AL+D Y KC + + F+ + + N V WN I+ G++ G + ALS
Sbjct: 392 KIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALS 451
Query: 300 SFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F EM + M C VT VL AC+ ++ +I S+ K +
Sbjct: 452 VFCEMQAAQMPC----TQVTYSSVLRACASTASIRHAGQIHCSIE-KSTFNNDTVIGNSL 506
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
+D + G + A ++ + + R IS W A+++ ++G+ AAD L D +
Sbjct: 507 IDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISGYALHGQ------AADALELFDRMNK 559
Query: 418 GN 419
N
Sbjct: 560 SN 561
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 156/326 (47%), Gaps = 9/326 (2%)
Query: 29 GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
G+ +H ++ G + D+F +MY K G A ++FD MPERN+ ++ +
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + A F LR G E + L L +H + G D N
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V +GL+D Y C+ V A+ VF+GI+ K+ V W +M+ Y +N EN ++F R
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G +P F ++SVL A + + LG+ +H A+K + VG AL+DMY KCG I+DA
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+AF +P +++ + +I YA + A F + MR +PN +L VL AC+
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL--MRSSVLPNEYSLSSVLQACT 375
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAE 352
++ G +I + IK G E
Sbjct: 376 NMVQLDFGKQIH-----NHAIKIGHE 396
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/579 (37%), Positives = 322/579 (55%), Gaps = 3/579 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A + L + + A +G DVFV + +YS+ G DA ++
Sbjct: 109 PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRV 168
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD MP ++ W+ ++ V GRP A+ + +R G D + + AC+
Sbjct: 169 FDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT 228
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
++G +HG +R G +V + LVD Y K +A+ VF + +N VSW +++ +
Sbjct: 229 RMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGF 288
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
QN + +F G++P + S L ACA + L+LG+S+H ++ +E
Sbjct: 289 AQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQC 347
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+A++DMY KCGS++ A FNK+ R+LV WNA+I G AL+ F+E+
Sbjct: 348 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNET 407
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P++ T +LSA S +G VE+G F M ++GI+P +H CVVDLL R+GLV
Sbjct: 408 GIK--PDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLV 465
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
+ A E++ M PTI +W ALL+ C K ELG A + + P D G L+SN++
Sbjct: 466 EEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLY 525
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AA +W++ +RK MKD G KK G S I V H F +D SH ++ EI M++KL
Sbjct: 526 AAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLS 585
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
EM+ GY+P T F +D++E+ K + +HSE++A+AFGL+ PG + I KNLR+CG
Sbjct: 586 FEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCG 645
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K+IS IV RE++VRD RFH F DG CSC DYW
Sbjct: 646 DCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 174/371 (46%), Gaps = 15/371 (4%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN--LATWNAYISNAVL 88
+LHAL + S ++F +A Y++ G D A+ P + WNA ++
Sbjct: 33 RLHALLVVSSS-QNLFPSLAA--AYARVGALDAAESTLAASPSSRSCIPAWNALLAARSR 89
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P A+ F L + PD TF L AC+ L + +G+ +V V
Sbjct: 90 AGSPGAALRVFRALP-SSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFV 148
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C+ L+ Y +C +G A VFDG+ K+ V+W +M+ +V M+ R GV
Sbjct: 149 CSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGV 208
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ ++ V+ AC +G SVH ++ + ++ + ++LVDMY K G A
Sbjct: 209 AEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQ 268
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F MP RN V WNA+I G+A GHAD AL F EM++ + P+ LV L AC+
Sbjct: 269 VFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQ--PDSGALVSALLACADV 326
Query: 329 GAVEKGMKI--FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G ++ G I F L++ G V+D+ + G ++ A ++ ++ R + +W
Sbjct: 327 GFLKLGKSIHGFILRRLEFQCILG----TAVLDMYSKCGSLESARKLFNKLSSRDLV-LW 381
Query: 387 GALLNACRVYG 397
A++ C +G
Sbjct: 382 NAMIACCGTHG 392
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 11/293 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++ ++ + +A + G +H L+ G DV + S DMY+K G
Sbjct: 203 MREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGH 262
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F MP RN +WNA IS G A+D F + +G +PD + L A
Sbjct: 263 FDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLA 322
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D L+LG+ +HGF++R + + ++D Y KC + A+ +F+ + ++ V W
Sbjct: 323 CADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLW 381
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-----RSVH 235
+M+ + + +F G++P +S+LSA + +E G R +
Sbjct: 382 NAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIT 441
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGG 287
++ + + V VD+ + G +++A E+ + E + W A++ G
Sbjct: 442 EFGIEPTEKHCVCV----VDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/596 (39%), Positives = 334/596 (56%), Gaps = 14/596 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQ--LHALALKSGQIHDVFVGCSAFDMYSKT 58
M++E PN TF KA+ + G+ LH +G DV VG + MY T
Sbjct: 329 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 388
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G D A FD +P +N+ +WNA ++ GR + A++ F ++R P+ +++ A L
Sbjct: 389 GAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 448
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C D S R +H +V +G F S+ NG+V + + + A FD + K+
Sbjct: 449 GCCEDVSE---ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDS 505
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW + + + F T + EG P F + SV+ CA + LELGRS+
Sbjct: 506 VSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQ 565
Query: 238 AVKAC-VEGNIFVGSALVDMYGKCGS-IQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGH 293
A VE ++ V SA+++M KCGS + + E F +MP+ ++LV WN +I YA GH
Sbjct: 566 LSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 625
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI-KPGAE 352
AL F M R P+ T V VLS CS AG VE G+ F+ GI + E
Sbjct: 626 GRKALKLFRIM-QQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE 684
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC+VD+LGR G + A + I++MP+ VW +LL AC YG E G AA +L
Sbjct: 685 HYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 744
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA-GCSWISVKNRIHIFQAKDT 471
+DS +V+LSN++AA GRWE++ VR++M + +KK G S I VKNR+H F A+D
Sbjct: 745 YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDR 804
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH ++ I A L +L+ ++ AGY+PDT L+DVEEE+K + +HSEK+A+AFGLI++
Sbjct: 805 SHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISV 864
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFW-DGYCSCSDYW 586
P IR+ KNLR+C DCH+A KFI+ + RE+ VRD NRFH F DG CSC DYW
Sbjct: 865 PHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 186/415 (44%), Gaps = 16/415 (3%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + PN +F + + + +HA + G + DV V + MY + G D+
Sbjct: 231 EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDE 290
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ +F+ M RN +WNA I+ G A + +++ G P+ ITF L A
Sbjct: 291 SIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 350
Query: 124 CSLLQLGRQ--LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S LG LHG++ +G +G+V V LV YG + A+ FD I KN VSW
Sbjct: 351 SSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWN 410
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-K 240
+ML Y N ++F +R+ + P +VL C ++ RS+HA V
Sbjct: 411 AMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHAEVVGN 467
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + +V M+ + GS+++A AF+ ++ V WN + + + A+++
Sbjct: 468 GLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITA 527
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M+ E P+ TLV V+ C+ G +E G I ++ ++ + V++
Sbjct: 528 F---YTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMN 584
Query: 360 LLGRAG-LVDRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++ + G VD + MP R + W ++ A Y + GR A LF++
Sbjct: 585 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA---YAQHGHGRKAL-KLFRI 635
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 167/381 (43%), Gaps = 25/381 (6%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+QLH +K G + +G MYSK DDA+ F + R +ATWN I+
Sbjct: 43 GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQ-- 100
Query: 89 GGRPKNAIDAFINLR---RTGGEPDLITFCAFLNACSD----------CSLLQLGRQLHG 135
P D + ++ R P+ +T A L A + + R +H
Sbjct: 101 -SSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHD 159
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
+ S + ++ V L+D YGKC V A VF I + + W + ++ N E +
Sbjct: 160 DIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPD 219
Query: 196 GCQMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ L RR EG+ P ++LS+C + L L RS+HA + G++ V +A
Sbjct: 220 --RALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATA 277
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
LV MYG+CGS+ ++ F M RN V WNA+I +A GH A + + M
Sbjct: 278 LVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFR-- 335
Query: 313 PNYVTLVCVL-SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PN +T V L +ACS + + G++ +V + G G +DRA
Sbjct: 336 PNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRAR 395
Query: 372 EIIKEMPMRPTISVWGALLNA 392
+P + +S W A+L A
Sbjct: 396 AAFDAIPAKNIVS-WNAMLTA 415
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 132/305 (43%), Gaps = 20/305 (6%)
Query: 103 RRTGGEPDLI---TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
R T D I T L C + L GRQLH +V+ G N + N LV Y KC
Sbjct: 13 RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFLTARREGVEPKDFMISSV 218
+ A F + + +W +++ + +M L R E P I +V
Sbjct: 73 RSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAEN-RPNKLTIIAV 131
Query: 219 LSACA----------RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
L A A R + R VH + +E ++FV +AL+D YGKCG ++ A
Sbjct: 132 LGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALE 191
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLSACSR 327
F+++ +L+CWNA I A G+ + + + M E +PN + V +LS+C
Sbjct: 192 VFSRIQVPDLICWNAAIMACA--GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGD 249
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
++ I ++ + G +V + GR G VD + + + M +R +S W
Sbjct: 250 HSSLPLARSI-HARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS-WN 307
Query: 388 ALLNA 392
A++ A
Sbjct: 308 AMIAA 312
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ +L C A L GR +H VK + N +G+ LV MY KC S+ DA AF+ +
Sbjct: 27 LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALR 86
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM----RCEAVPNYVTLVCVLSACS---- 326
R + WN +I + + F+ T M R E PN +T++ VL A +
Sbjct: 87 SRGIATWNTLIAAQSSPA------AVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDP 140
Query: 327 ------RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
RA ++ + +I + ++ ++D G+ G V+ A E+ + +
Sbjct: 141 SSSSSSRAPSIAQA-RIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV- 198
Query: 381 PTISVWGALLNAC 393
P + W A + AC
Sbjct: 199 PDLICWNAAIMAC 211
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 352/662 (53%), Gaps = 78/662 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSAL-HIPVTGKQLHALALKSGQ---------IHDVFVGCS 50
M+R+ P+++TF + A + + +QLH +KSG + +V C+
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS-------------------------- 84
A + L +A K+FDEMP R+ +W I+
Sbjct: 198 ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAW 257
Query: 85 NAVLGGRPKNAI--DAFINLRR---TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
NA++ G + +AF R+ + + D TF + ++ C++ +LG+++H + ++
Sbjct: 258 NAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK 317
Query: 140 S----GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV------- 188
+ D + V N L+ FY KC +V +A+ +F+ + +++ VSW +L YV
Sbjct: 318 TVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDE 377
Query: 189 ------------------------QNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
Q E + F + +G EP D+ + + +C+
Sbjct: 378 AKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSV 437
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ L+ GR +HA V+ E ++ G+AL+ MY +CG + A F MP + + WNA+
Sbjct: 438 LGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAM 497
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G A+ FEEM ++ +P+ ++ + V+SACS AG V++G K F SM
Sbjct: 498 IAALGQHGQGTQAIELFEEM--LKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV 555
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
YG+ P EHYA ++DLL RAG A E+++ MP P +W ALL CR++G +LG
Sbjct: 556 YGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIE 615
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA+ LF+L P G +VLLSNM+A G+W + VRK M+D G+KK GCSWI V+N++H
Sbjct: 616 AAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F D +H +I L +L EM+ GY+PDT L+DVE + K E+ HSEK+A+
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAV 735
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
A+G + +P G +R+ KNLRICGDCH+AFKF+S +VGRE++VRD RFH F DG CSC D
Sbjct: 736 AYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGD 795
Query: 585 YW 586
YW
Sbjct: 796 YW 797
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 182/436 (41%), Gaps = 88/436 (20%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFIN 101
D+ + YS G + K+F + P R+ +NA I+ AI+ F +
Sbjct: 78 DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
++R PD TF + L A + + + +QLH +V+SG SV N L+ Y KC
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197
Query: 161 E---------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE------NGC-------- 197
+ A+ +FD + +++++SW +++ YV+N + + NG
Sbjct: 198 ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAW 257
Query: 198 -----------------QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+MF ++ +F +SV+S CA LG+ +HA +K
Sbjct: 258 NAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK 317
Query: 241 ACV----EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ + V +AL+ Y KCG + A+ FNKMPER+LV WN I+ GY + D
Sbjct: 318 TVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDE 377
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL------------- 343
A S F EM N ++ + ++S ++ G E+ +K F M L
Sbjct: 378 AKSFFNEMPE------KNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431
Query: 344 ---------------------KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
+YG + ++ + R G+VD A+ + MP
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDA 491
Query: 383 ISVWGALLNACRVYGK 398
IS W A++ A +G+
Sbjct: 492 IS-WNAMIAALGQHGQ 506
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 133/341 (39%), Gaps = 82/341 (24%)
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-------------- 174
L R +H ++ SGF + N L+D Y K +++ A+ +FD I
Sbjct: 31 LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90
Query: 175 -------------------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
++ V + +M+ Y N++ ++F +R+ P ++
Sbjct: 91 AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150
Query: 216 SSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGS---------IQD 265
+SVL A A +A E + +H VK+ V +AL+ Y KC + + +
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210
Query: 266 AEIAFNKMPERNL-------------------------------VCWNAIIGGYAHQGHA 294
A F++MP R+ V WNA+I GYAH+G
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A F +M + + + T V+S C+ AG G K ++ LK P +
Sbjct: 271 LEAFEMFRKMIMSKIQL--DEFTFTSVISVCANAGCFRLG-KEMHAYFLKTVANPAPDVA 327
Query: 355 ACV----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
V + + G VD A EI +MP R +S W +L+
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVS-WNIILS 367
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 322/546 (58%), Gaps = 6/546 (1%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+FVG + MY++ ++A ++F M ++NL TW+A I+ G A+ F ++
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN--E 161
+ G P+ +TF + LN + S L+ ++H + G D ++ N LV+ YG+C E
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGE 264
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ +A+V+ + ++ +W ++ Y + + + + E + SVL+A
Sbjct: 265 LDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNA 324
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C L G+ +H+ AV+ ++ ++ V +AL +MY KCGS+++A F+ MP R+ V W
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 384
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYS 340
N ++ YA G ++ L +M E V N +T V VLS+CS AG + +G + F+S
Sbjct: 385 NGMLQAYAQHGESEEVLKLIRKMEQ---EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHS 441
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ GI+ EHY C+VDLLGRAG + A + I +MP P I W +LL ACRV+ +
Sbjct: 442 LGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLD 501
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
G++AA L +LDP +S V+LSN+++ G W+ A +R+ M +KK G S I VK
Sbjct: 502 RGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVK 561
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
N++H F+ +DTSH R EI + +L M+ AGY+PDT L+DV+EE+K + + +HSE
Sbjct: 562 NKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSE 621
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
K+A+AFGLI+ P + I KNLR+C DCH+A KFIS I GRE++VRDN+RFH F DG C
Sbjct: 622 KLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSC 681
Query: 581 SCSDYW 586
SC DYW
Sbjct: 682 SCKDYW 687
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 198/403 (49%), Gaps = 8/403 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N TF + + GK +H+ +S DVFV + + Y+K G
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD MP R++ TWN+ IS + R A F ++ G D +TF + L+A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + LQ G+ + + + F+ ++ V L+ Y +C A VF + KN ++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + + + F ++EG+ P S+L+ +GLE +H + +
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240
Query: 241 ACVEGNIFVGSALVDMYGKC--GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ + +ALV++YG+C G + AE+ +M E+ + WN +I GY G + AL
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300
Query: 299 SSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+++ ++ EA+P + VT + VL+AC+ + ++ +G K+ +S ++ G+ +
Sbjct: 301 ETYQR---LQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNAL 356
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + G ++ A I MP+R +S W +L A +G+ E
Sbjct: 357 TNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE 398
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 20/299 (6%)
Query: 1 MRRECISPNDFTF---------PCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA 51
M++E I PN TF P + S +H+ +T L S + +V+ C
Sbjct: 203 MQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRC-- 260
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
+TG D A+ + EM E+ + WN I+ L GR + A++ + L+ D
Sbjct: 261 -----ETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDK 315
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
+TF + LNAC+ + L G+ +H V G D +V V N L + Y KC + A+ +FD
Sbjct: 316 VTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDS 375
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--E 229
+ ++ VSW ML Y Q+ E E ++ +EGV+ SVLS+C+ AGL E
Sbjct: 376 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSH-AGLIAE 434
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+ H++ +E LVD+ G+ G +Q+AE +KMP E +V W +++G
Sbjct: 435 GCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 321/560 (57%), Gaps = 6/560 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+++H + SG + F+ DMY K G +A ++FD M +N+ +W ++ V
Sbjct: 60 GRRIHRW-MDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFV 118
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
GR AI F + + G PD + F+++C L GR++H G D ++
Sbjct: 119 QSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLV 178
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
N +++ YGKC +G A VF + +KN +SW +M+ + QN + F ++EG
Sbjct: 179 TANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEG 238
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+E SVL A + LELG+++H V A ++ +I VG+ LV+MYGKCGS DA
Sbjct: 239 MELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDAR 298
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 326
F+ M E+N+V WNA++ Y G + AL+ F+ SM E V PN +T V +L CS
Sbjct: 299 DVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFD---SMDLEGVRPNDITFVTILYCCS 355
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
+G + + F M +GI P H+ C++D+LGR+G ++ A E+I+ MP+ +W
Sbjct: 356 HSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLW 415
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
+LL AC + + AA+ F+ +P + +++LSN++AA +W+EA VRK M+
Sbjct: 416 TSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQA 475
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G++K AG SWI + ++H F A D+ H + I L +L EM+ GY PD ++ +
Sbjct: 476 GVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSM 535
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
EEEEK + +HSEK+A+AFG+ + PP P+ I KNLR+C DCHSA KFISG+ GR + V
Sbjct: 536 EEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITV 595
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD+NRFH F G CSC DYW
Sbjct: 596 RDSNRFHHFDRGECSCGDYW 615
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 9/326 (2%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
+ A+D GG DL + C+ L+ GR++H ++ D + N L
Sbjct: 26 REAVDLLEQSGAAGGTGDLEQL---IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLL 82
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
VD YGKC + AK VFD + KN SW ++ +VQ+ Q+F +EG P
Sbjct: 83 VDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDR 142
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ + +C L GR +H+ A ++ ++ +A+++MYGKCGSI +A F +
Sbjct: 143 VALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTR 202
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
MPE+N++ W+ +I + AD AL F+ M E + +T V VL A + GA+E
Sbjct: 203 MPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMEL--DRITYVSVLDAYTSVGALE 260
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G K + + G+ +V++ G+ G D A ++ M + +S W A+L A
Sbjct: 261 LG-KALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVS-WNAMLAA 318
Query: 393 CRVYGKPE--LGRIAADNLFKLDPND 416
G+ L + +L + PND
Sbjct: 319 YGQNGRSREALALFDSMDLEGVRPND 344
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + + T+ + A +++ GK LH + +G + VG + +MY K G
Sbjct: 234 MQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGS 293
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD M E+N+ +WNA ++ GR + A+ F ++ G P+ ITF L
Sbjct: 294 PDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYC 353
Query: 121 CSDCSLLQLG-------RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI- 172
CS + RQ G R G C L+D G+ ++ A+ + +
Sbjct: 354 CSHSGKFKDAVSHFVEMRQDFGITPREVHFG----C--LIDMLGRSGKLEEAEELIQAMP 407
Query: 173 IDKNDVSWCSMLVVYVQN 190
+ + V W S+L V +
Sbjct: 408 VPADAVLWTSLLCACVTH 425
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 327/573 (57%), Gaps = 3/573 (0%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
S N TF A G+ LH L + SG ++ +G + MY K G ++ +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS-DCS 125
+ +MP R++ WNA I P A+ AF +R G + IT + L+AC
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LL+ G+ LH ++V +GF+ + V N L+ Y KC ++ ++ +F+G+ ++N ++W +ML
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 521
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ E ++ R GV F S LSA A++A LE G+ +H +AVK E
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ F+ +A DMY KCG I + R+L WN +I G+ + ++F EM
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
M + P +VT V +L+ACS G V+KG+ + + +G++P EH CV+DLLGR+G
Sbjct: 642 EMGIK--PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 699
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
+ A I +MPM+P VW +LL +C+++G + GR AA+NL KL+P D +VL SN
Sbjct: 700 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSN 759
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
MFA TGRWE+ + VRK+M IKK CSW+ +K+++ F D +H + EI A L
Sbjct: 760 MFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED 819
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+++ +K +GY+ DT+ AL D +EE+K + +HSE++ALA+ L++ P G +RI KNLRI
Sbjct: 820 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 879
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
C DCHS +KF+S ++GR +++RD RFH F G
Sbjct: 880 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 189/401 (47%), Gaps = 5/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + N+ + + + L G+Q+ +KSG + V S M G
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A+ +FD+M ER+ +WN+ + G + + F +RR E + T L+
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ GR +HG +V+ GFD V VCN L+ Y A +VF + K+ +SW
Sbjct: 254 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ +V + + + + G +S L+AC E GR +H + V
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + N +G+ALV MYGK G + ++ +MP R++V WNA+IGGYA D AL++
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F+ +MR E V NY+T+V VLSAC G + + K ++ + G + ++
Sbjct: 434 FQ---TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G + + ++ + R I+ W A+L A +G E
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIIT-WNAMLAANAHHGHGE 530
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 188/393 (47%), Gaps = 8/393 (2%)
Query: 2 RREC---ISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
R+ C I P+ F L A + + G Q+H KSG + DV+V + +Y
Sbjct: 30 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 89
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
GL + K+F+EMP+RN+ +W + + G P+ ID + +R G + +
Sbjct: 90 YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+++C LGRQ+ G +V+SG + ++V N L+ G V A +FD + +++
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+SW S+ Y QN E ++F RR E +S++LS + + GR +H +
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK + + V + L+ MY G +A + F +MP ++L+ WN+++ + + G + A
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L M S NYVT L+AC EKG +I + + + G+ +
Sbjct: 330 LGLLCSMIS--SGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNAL 386
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V + G+ G + + ++ +MP R ++ W AL+
Sbjct: 387 VSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 418
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 13/325 (4%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SLLQL 129
MP RN +WN +S V G ++ F + G +P + + AC S+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G Q+HGF+ +SG +V V ++ YG V ++ VF+ + D+N VSW S++V Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
E E ++ R EGV + +S V+S+C + LGR + VK+ +E + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
++L+ M G G++ A F++M ER+ + WN+I YA GH + + F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR----AG 365
E N T+ +LS + G I + + +K G + CV + L R AG
Sbjct: 241 EV--NSTTVSTLLSVLGHVDHQKWGRGI-HGLVVKMGF----DSVVCVCNTLLRMYAGAG 293
Query: 366 LVDRAYEIIKEMPMRPTISVWGALL 390
A + K+MP + IS W +L+
Sbjct: 294 RSVEANLVFKQMPTKDLIS-WNSLM 317
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + F+F A++ L + G+QLH LA+K G HD F+ +A DMYSK G
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ KM R+L +WN IS G + F + G +P +TF + L A
Sbjct: 599 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + R G + + C ++D G+ + A+ + + ND+
Sbjct: 659 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 718
Query: 179 SWCSML 184
W S+L
Sbjct: 719 VWRSLL 724
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 331/585 (56%), Gaps = 8/585 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R+C +P L +S I +++HA KS D F+G Y+K G +
Sbjct: 33 RQCATPEAIVSALLIAVNSCPSIS-NCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAE 91
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR-RTGGEPDLITFCAFLNAC 121
DA K+FD+MP ++L +WN+ IS ++ AF ++ +P+ +T + ++AC
Sbjct: 92 DALKLFDDMPHKDLVSWNSLISG--FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISAC 149
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L G+ +HGF ++ G V V N L++ YGK ++ A +F+ I D N VSW
Sbjct: 150 NGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWN 207
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
S++ V N G F RR G+E + I ++L AC + +L S+H +
Sbjct: 208 SIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCT 267
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
I + +AL+D Y K G + + F ++ + V W A++ GYA G A+ F
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
E M + E P++VT +LSACS +G V +G F M+ YGI+P +HY+C+VDLL
Sbjct: 328 ESMANKGLE--PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLL 385
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GR GL++ AYE+I+ MPM P VWGALL ACRV+G ELG+ A++L ++P D N++
Sbjct: 386 GRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYI 445
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
+LSNM++A+ W++A VR +K+ G+K+ G S I N+ H F D SH +I +
Sbjct: 446 MLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYS 505
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +L +++ AGY T + L DVEEE K + HSEK+A+AFGL+ G + ITK
Sbjct: 506 KLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITK 565
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLRICGDCHS K IS I R +I+RD RFH F DG+CSC+DYW
Sbjct: 566 NLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 40/281 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR I ++ T L +A L + + +H L +G + + + D Y+K G
Sbjct: 229 MRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGR 288
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +F E+ + W A ++ G + AI F ++ G EPD +TF L+A
Sbjct: 289 LSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSA 348
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L+ G+ + G + V + +VD G+C GL ++
Sbjct: 349 CSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC---GLLNDAYE--------- 396
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV--HAV 237
+QN +EP + ++L AC +ELG+ V H +
Sbjct: 397 -------VIQNMP---------------MEPNAGVWGALLGACRVHGNIELGKEVAEHLI 434
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
++ N + L +MY S +DA + ER L
Sbjct: 435 NMEPLDPRNYIM---LSNMYSASRSWKDAAKVRALLKERGL 472
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/527 (40%), Positives = 316/527 (59%), Gaps = 14/527 (2%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A FD+MP ++ A+WN IS G A + F+ + +++ A ++
Sbjct: 85 ESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNS----VSWNAMISGY 140
Query: 122 SDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L L +QL VRS V ++ + K ++ LA+ F+ + KN V+W
Sbjct: 141 VESGDLDLAKQLFEVAPVRS-----VVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTW 195
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y++N + ENG ++F G P +SSVL C+ ++ L+LG+ VH + K
Sbjct: 196 NAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICK 255
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ V NI G++L+ MY KCG ++DA F MP++++V WNA+I GYA G + AL
Sbjct: 256 SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYL 315
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M R E + P+++T V VLSAC+ AG V+ G++ F SM YG++ +HY CVVD
Sbjct: 316 FDKM---RDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVD 372
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGR G + A ++IK+MP +P +++G LL ACR++ EL AA NL LDP +
Sbjct: 373 LLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAG 432
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V L+N++AA RW+ +VR+ MKD + K G SWI VK+ +H F++ D H I
Sbjct: 433 YVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFI 492
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L +L +M+ AGY+PD +AL+DV EE+K + HSEK+A+A+GLI +P G PIR+
Sbjct: 493 HEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRV 552
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHSA K+IS I GR +IVRD RFH F G CSC DYW
Sbjct: 553 FKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 13/315 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
KQL +A + V + + K G + A+K F+EMP +NL TWNA I+ +
Sbjct: 149 AKQLFEVA----PVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIE 204
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ +N + F + +G P+ + + L CS+ S L+LG+Q+H + +S N++
Sbjct: 205 NCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITA 264
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+ Y KC ++ A +F + K+ V+W +M+ Y Q+ E +F R EG+
Sbjct: 265 GTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGM 324
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAE 267
+P +VLSAC ++LG V+ VE + +VD+ G+ G + +A
Sbjct: 325 KPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAV 384
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSF--EEMTSMRCEAVPNYVTLVCVLSA 324
KMP + + + ++G A + H ++ L+ F + + ++ E+ YV L V +A
Sbjct: 385 DLIKKMPFKPHSAIFGTLLG--ACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAA 442
Query: 325 CSR---AGAVEKGMK 336
+R V + MK
Sbjct: 443 MNRWDHVAMVRRSMK 457
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN + + S L GKQ+H L KS ++ G S MY K G +DA K+
Sbjct: 225 PNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKL 284
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F MP++++ TWNA IS G + A+ F +R G +PD ITF A L+AC+ +
Sbjct: 285 FLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFV 344
Query: 128 QLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGK 158
LG + +VR G + +VD G+
Sbjct: 345 DLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGR 376
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 19/261 (7%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFLTA 203
NV N ++ + + ++ A VF+ + K V+W SML Y + + Q+F
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLF--- 60
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEGNIFVGSALVDMYGKCGS 262
EP F + +L+ A +E R + VK N + + + G
Sbjct: 61 -DRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISG-----FSQNGM 114
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A F MP RN V WNA+I GY G D+A FE V + V ++
Sbjct: 115 MDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFE------VAPVRSVVAWTAMI 168
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
+ + G +E K F M +K + A + + GL + ++ + E RP
Sbjct: 169 TGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGL--KLFKRMVESGFRPN 226
Query: 383 ISVWGALLNACRVYGKPELGR 403
S ++L C +LG+
Sbjct: 227 PSSLSSVLLGCSNLSALKLGK 247
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E +IF + ++ Y ++ A + F++MP ++ WN +I G++ G D A F
Sbjct: 65 EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLV 124
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M V N V+ ++S +G ++ ++F ++ + + ++ +
Sbjct: 125 M------PVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVA-----WTAMITGFMK 173
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNA----CRVYGKPELGRIAADNLFKLDPNDSGN 419
G ++ A + +EMPM+ ++ W A++ C+ +L + ++ F+ +P+ S +
Sbjct: 174 FGKIELAEKYFEEMPMKNLVT-WNAMIAGYIENCQAENGLKLFKRMVESGFRPNPS-SLS 231
Query: 420 HVLL--SNMFA 428
VLL SN+ A
Sbjct: 232 SVLLGCSNLSA 242
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-QGHADMALSSFEEM 304
N+ + ++ + + G + A F M + V WN+++ GY++ +G +A F+ +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
P+ + +L+ VE F M +K + ++ +
Sbjct: 64 PE------PDIFSYNIMLACYLHNADVESARLFFDQMPVK-----DTASWNTMISGFSQN 112
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G++D+A E+ MP+R ++S W A+++ G +L A LF++ P S V +
Sbjct: 113 GMMDQARELFLVMPVRNSVS-WNAMISGYVESGDLDL----AKQLFEVAPVRSV--VAWT 165
Query: 425 NMFAATGRWEEADLVRKEMKDVGIK 449
M ++ + +L K +++ +K
Sbjct: 166 AMITGFMKFGKIELAEKYFEEMPMK 190
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 348/619 (56%), Gaps = 41/619 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T+ + S + G+++HA + +G D+ V + +MY K G +A
Sbjct: 203 MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAR 262
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD+M +R++ +WN I V G A++ + L G + TF + L ACS
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR +H ++ G D V+V LV+ Y KC + A+ VF+ + +++ V+W +++
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 186 VYVQN-YEE----------------------------ENGCQMF-LTARRE-----GVEP 210
Y N Y + +NGC + + RE G++P
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKP 442
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+VL ACA + L +++HA ++ +E N+ V + L++MY +CGS+++AE F
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
E+ +V W A++ ++ G AL F+EM E V P+ VT +L C+ G
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD---LEGVKPDDVTYTSILFVCTHGG 559
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++E+G + F M +G+ P A+H+A +VDLLGR+G + A E+++ MP P W
Sbjct: 560 SLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTF 619
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L ACR++GK ELG AA+ +++LDP+ + ++ +SN++AA G WE+ VRK+M++ G+K
Sbjct: 620 LTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K G S+I V ++H F + H R EI LT+L M+AAGY+PDT L+DV E
Sbjct: 680 KLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEG 739
Query: 510 EKMTEVGHHSEKIALAFGLIAIP-PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EK T + +HSEK+A+AFGL++ G PIR+ KNLR+C DCH+A KFI+ I GR++I+RD
Sbjct: 740 EKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRD 799
Query: 569 NNRFHRF-WDGYCSCSDYW 586
NRFHRF DG CSC DYW
Sbjct: 800 CNRFHRFSSDGKCSCGDYW 818
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 213/456 (46%), Gaps = 21/456 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + + TF + A S+L G+++H SG + + MY++ G
Sbjct: 101 MNLQGLGTDHVTFVSVLGACSSL---AQGREIHNRVFYSGLDSFQSLANALVTMYARFGS 157
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +MF + R+ +WNA I G A+ F ++ +P+ T+ ++
Sbjct: 158 VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISG 216
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S +L GR++H +V +GFD ++ V L++ YGKC A+ VFD + ++ VSW
Sbjct: 217 FSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ YVQN + +++ EG + S+L AC+ + L GR VH+ ++
Sbjct: 277 NVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH---ADMA 297
++ + V +ALV+MY KCGS+++A FN M R+ V W+ +IG YA G+ A A
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKA 396
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F+ + S R N + V + C+ A MKIF MT G+KP A + V
Sbjct: 397 RKVFDRLGS-RDTICWNAMITTYVQNGCAVA-----AMKIFREMTGAAGLKPDAVTFIAV 450
Query: 358 VDL---LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
++ LGR V + I E + + V L+N G E A+ LF
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE----EAERLFAAAK 506
Query: 415 NDS-GNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+ + + F+ GR+ EA + +EM G+K
Sbjct: 507 EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 238/512 (46%), Gaps = 22/512 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++ TF + + S+ G+ LH S D VG + MY K DA +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 68 FDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
F+ M +RN+ +WNA I+ G A+ + + G D +TF + L ACS S
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--S 122
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L Q GR++H + SG D S+ N LV Y + VG AK +F + +++ SW ++++
Sbjct: 123 LAQ-GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ Q+ + ++F + + ++P +V+S + L GR +HA V +
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ V +AL++MYGKCGS +A F+KM +R++V WN +IG Y G AL ++++
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ T V +L ACS A+ +G ++ +S L+ G+ +V++ + G
Sbjct: 301 MEGFKRTK--ATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ A ++ M R ++ W L+ A G + R A +L D+ +
Sbjct: 358 SLEEARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMIT 416
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+ G A + +EM K ++I+V S R +E++A+ +
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC-------ASLGRLSEVKALHAQ 469
Query: 486 LRE-EMKAAGYIPDTNFALY----DVEEEEKM 512
+ E E+++ + +T +Y +EE E++
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERL 501
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 10/285 (3%)
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
+PD +TF L +CS C + GR LH + S F+ + V N L+ YGKC+ + A+
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 168 VFDGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
VF+ + +N VSW +M+ Y QN ++ +G+ SVL AC+ +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
A GR +H + ++ + +ALV MY + GS+ DA+ F + R+ WNA+I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
++ G AL F+E M+C+ PN T + V+S S + +G KI ++ +
Sbjct: 181 LAHSQSGDWSGALRIFKE---MKCDMKPNSTTYINVISGFSTPEVLPEGRKI-HAEIVAN 236
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G ++++ G+ G A E+ +M R +S W ++
Sbjct: 237 GFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-WNVMI 280
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/652 (34%), Positives = 350/652 (53%), Gaps = 69/652 (10%)
Query: 1 MRRECISPNDFTFPCLFK--ASSALHIPVTGKQLHALALKSGQIHDV-FVGCSAFDMYSK 57
MRR + + FTF LFK A H+ + + LHA ++ V V MY +
Sbjct: 94 MRRTGVCTDAFTFHFLFKCCARGRAHV-LLCQMLHAACFRTMLPSAVPLVSNPIIHMYVE 152
Query: 58 TGLKDDADKMFDEMP-------------------------------ERNLATWNAYISNA 86
GL DA + FD++P RN+ +W IS
Sbjct: 153 LGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGY 212
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
GR A+D F ++ G EPD +T L+AC+ L GR LH + G +
Sbjct: 213 SRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSG 272
Query: 147 SVCNGLVDFYGKCNEVG--------------------------------LAKVVFDGIID 174
+ L+D Y KC ++G +A+ +FD + D
Sbjct: 273 KLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMED 332
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ V++ S++ Y+ +F+ RR + +F + S+L+ACA + L GR++
Sbjct: 333 RDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRAL 392
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA + VE +I++G+AL+DMY KCG +++A + F M R++ W+A+I G A G
Sbjct: 393 HACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMG 452
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F M + PN VT + +L+ACS + +++G F M L + I+P EHY
Sbjct: 453 KAALEYFFWMKVDGFQ--PNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHY 510
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++DLLGR+GL+D A ++++ MPM+P +W ++L+ACRV+ L R AA++L KL+P
Sbjct: 511 GCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEP 570
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++ +V L N++ + +WE+A +R+ M++ G+KK AG S I+V ++H F D +H
Sbjct: 571 DEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHP 630
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+ EI AM+ ++ +K+ GY P T+ DV+EEEK + HSEKIA+AFGLI++ P
Sbjct: 631 QIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPN 690
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+P+ I KNLR+C DCHSA K IS I RE+IVRD +RFH F DG CSC+D+W
Sbjct: 691 LPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 185/450 (41%), Gaps = 82/450 (18%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-S 125
+FD MP A + P++ + + +RRTG D TF C+ +
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 126 LLQLGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFD-------------- 170
+ L + LH R+ V V N ++ Y + G A+ FD
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178
Query: 171 ------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
G++D +N +SW ++ Y + F + +G+EP +
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEV 238
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSI-------- 263
+ +LSACA++ L GRS+H + + + G + V AL+DMY KCG I
Sbjct: 239 TVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVV--ALIDMYAKCGDIGRAWEVFD 296
Query: 264 ------------------------QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
A F++M +R+LV +N++I GY H G AL
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALL 356
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M R + + T+V +L+AC+ GA+ +G + ++ + ++ ++D
Sbjct: 357 LFMQMR--RHDLRADNFTMVSLLTACASLGALPQG-RALHACIEQRLVEVDIYLGTALLD 413
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF--KLD---P 414
+ + G V+ A + + M +R + W A++ G +G+ A + F K+D P
Sbjct: 414 MYLKCGRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNG---MGKAALEYFFWMKVDGFQP 469
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
N S ++ + + + +E L +EM+
Sbjct: 470 N-SVTYIAILTACSHSCLLDEGRLYFEEMR 498
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 315/563 (55%), Gaps = 37/563 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ G D + +F ++ W A I L G + A++ + + G EP+ TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG----------------- 157
+ L C ++ G+ LH V+ GFD ++ V GL+D Y
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 158 --------------KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
K E+ A+V+FDG+ +++ V W M+ Y QN +F
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ +P + + SVLSAC ++ LE GR VH+ ++ N+ VG+ALVDMY KCGS+
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+DA + F+K+ ++++V WN++I GYA G + AL F+ M M P +T + +LS
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLH--PTNITFIGILS 312
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AC +G V +G IF M +YGI+P EHY C+V+LLGRAG V++AYE++K M + P
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+WG LL ACR++GK LG + L + +SG ++LLSN++AA G W+ +R M
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
KD G+KK GCS I V N++H F A +H + EI ML ++ +K+ GY P T+ L
Sbjct: 433 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVL 492
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D+ E EK + HSEK+A+AFGLI PG I+I KNLR+C DCH K IS I GR+
Sbjct: 493 HDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRK 552
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
++VRD NRFH F +G CSC DYW
Sbjct: 553 IVVRDRNRFHHFVNGSCSCGDYW 575
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 39/367 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M + + PN FTF + K P+ GK LH+ A+K G D++V D+Y++ G
Sbjct: 66 MLTQGVEPNAFTFSSILKLC-----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGG 120
Query: 60 LKDDADKMFDEMPERNLAT-------------------------------WNAYISNAVL 88
A ++FD MPE++L + WN I
Sbjct: 121 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 180
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P A+ F + + +P+ +T + L+AC L+ GR +H ++ +G NV V
Sbjct: 181 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 240
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LVD Y KC + A++VFD I DK+ V+W SM+V Y + Q+F + R G+
Sbjct: 241 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGL 300
Query: 209 EPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDA- 266
P + +LSAC + G + + + + +E I +V++ G+ G ++ A
Sbjct: 301 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 360
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E+ N E + V W ++G G + E + Y+ L + +A
Sbjct: 361 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 420
Query: 327 RAGAVEK 333
V +
Sbjct: 421 NWDGVAR 427
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/587 (37%), Positives = 333/587 (56%), Gaps = 38/587 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + P ++T + A + L GKQ+H + +VFV + D+Y++ G
Sbjct: 146 MQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGE 205
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++FD M RN+ TWN IS + +P+ ID F ++ + +PD +T + L
Sbjct: 206 IDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL-- 263
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
G +++G+ + A+ VF I +K++V W
Sbjct: 264 --------------GAYIQAGY-------------------IDEARKVFGEIREKDEVCW 290
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+V QN +EE+ +F E P + ISSV+S+CA++A L G+ VH A
Sbjct: 291 TIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
V ++ V SALVDMY KCG +DA F+ M RN+V WN++IGGYA G ALS
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSL 410
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
+E M + P+ VT V VLSAC AG VE+G + F SM+ ++G++P +HYAC+V+L
Sbjct: 411 YENMLEENLK--PDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNL 468
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
GR+G +D+A ++I M P +W +L+ C + G + G +AA L +L+P ++ +
Sbjct: 469 FGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPY 528
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
++LSNM+AA GRW++ +R MK +KK + SWI + N +H F A D +H I
Sbjct: 529 IMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIH 588
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV-PIRI 539
L +L +++ AG+ P+TN L+D E+EK+ + +HSEK+ALA+GLI P GV PIRI
Sbjct: 589 VQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRI 648
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+R C DCH KF+S I R VI+RD+NRFH F +G CSC DYW
Sbjct: 649 IKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 183/412 (44%), Gaps = 56/412 (13%)
Query: 4 ECISPNDFTFPCLFKASSALHI-----PVTGKQLHALALKSGQI------------HDVF 46
EC +D K+ LH+ +L L KSG+I D F
Sbjct: 31 ECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNF 90
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+ +Y+K+GL +D +FD MP R+ ++N IS GR A+ F+ +++ G
Sbjct: 91 SWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEG 150
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
+P T + LNAC+ L+ G+Q+HG ++ GNV VCN L D Y +C E+ A+
Sbjct: 151 LKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQAR 210
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
+FD ++ +N V+W M+ Y++N + E +F + ++P SSVL A
Sbjct: 211 RLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA----- 265
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
Y + G I +A F ++ E++ VCW +I
Sbjct: 266 ------------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIV 295
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
G A G + AL F EM + A P+ T+ V+S+C++ ++ G ++ + G
Sbjct: 296 GCAQNGKEEDALLLFSEM--LLENARPDGYTISSVVSSCAKLASLYHG-QVVHGKAFLMG 352
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ + +VD+ + G+ A+ I M R +S W +++ + G+
Sbjct: 353 VNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVS-WNSMIGGYALNGQ 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F +A++ +Y K G ++D + F+ MP R+ V +N +I G+A G AL F M
Sbjct: 90 FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE 149
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAG 365
+ P T V VL+AC++ + +G +I + + G + C + DL R G
Sbjct: 150 GLK--PTEYTHVSVLNACTQLLDLRRGKQIHGRIII---CNLGGNVFVCNALTDLYARCG 204
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+D+A + M +R ++ W +++ +PE
Sbjct: 205 EIDQARRLFDRMVIRNVVT-WNLMISGYLKNRQPE 238
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 335/590 (56%), Gaps = 9/590 (1%)
Query: 1 MRRECISPNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M++ ++PN T + ++ALH GK +HA +++ +V + + DMY+K
Sbjct: 201 MQQAGVTPNSSTLVSILPTIGQANALH---QGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCA 116
L A K+F+ + ++N W+A I VL +A+ + ++ G P T
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L AC+ + L+ G++LH +++SG D + +V N L+ Y KC + A D +I K+
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKD 377
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VS+ +++ VQN E +F + G+ P + ++L AC+ +A L+ G H
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
V + + +A++DMY KCG I + F++M R+++ WN +I GY G
Sbjct: 438 YTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVE 497
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
ALS F+E+ ++ + P+ VTL+ VLSACS +G V +G F SM+ + IKP HY C
Sbjct: 498 ALSLFQELQALGLK--PDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYIC 555
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLL RAG +D AY I+ MP P + +WGALL ACR + E+G + + L P
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEG 615
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+GN VL+SN++++ GRW++A +R + G KK GCSW+ + IH+F SH ++
Sbjct: 616 TGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQS 675
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
I L +L +MK GY D++F L+DVEEEEK + +HSEK+A+AFG++ P
Sbjct: 676 ASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSR 735
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I +TKNLRIC DCHSA KFI+ + RE+ VRD +RFH F DG C+C D+W
Sbjct: 736 ILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 195/395 (49%), Gaps = 7/395 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P +FTFP L KA S+L G+ +H A G D++V + MY+K G A
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162
Query: 66 KMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+F+ + +R++ WNA I+ I + +++ G P+ T + L
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L G+ +H + +R+ F NV + L+D Y KC+ + A+ +F+ + KNDV W +M
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAM 282
Query: 184 LVVYVQNYEEENGCQMFLTAR-REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
+ YV + + ++ G+ P ++++L ACA++ L+ G+ +H +K+
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ + VG++L+ MY KCG + +A ++M ++ V ++AII G G+A+ AL F
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFR 402
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M S P T++ +L ACS A++ G + T+ G ++D+
Sbjct: 403 QMQS--SGIAPYLETMIALLPACSHLAALQHG-TCCHGYTVVRGFTNDTSICNAIIDMYS 459
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G + + EI M R IS W ++ ++G
Sbjct: 460 KCGKITISREIFDRMQNRDIIS-WNTMIIGYGIHG 493
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD++P+ ++ WN I G + +I ++++ + G P TF L ACS
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWC 181
LQLGR +H G ++ V L+ Y KC + A+ +F+ I D++ V+W
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ + + ++ GV P + S+L + L G+++HA ++
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
N+ + +AL+DMY KC + A FN + ++N VCW+A+IGGY AL+ +
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALY 299
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M + P TL +L AC++ +++G K+ M +K G+ ++ +
Sbjct: 300 DDMLCIY-GLNPTPATLATMLRACAQLTDLKRGKKLHCHM-IKSGMDLDTTVGNSLISMY 357
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G++D A + EM + T+S + A+++ C G E
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVS-YSAIISGCVQNGYAE 395
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L ++ NE+ LA+ VFD I + V W M+ Y + + ++L + GV P
Sbjct: 47 LARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPT 106
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+F +L AC+ + L+LGR +H A + +++V +AL+ MY KCG + A+ FN
Sbjct: 107 NFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFN 166
Query: 272 KMP--ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+ +R++V WNA+I ++ + S +M + PN TLV +L +A
Sbjct: 167 SISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQM--QQAGVTPNSSTLVSILPTIGQAN 224
Query: 330 AVEKGMKI 337
A+ +G I
Sbjct: 225 ALHQGKAI 232
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 330/586 (56%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P TF L + + G +H + SG D ++ +MY G D A K
Sbjct: 71 NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDC 124
+FDE E+ + WNA + R ++ + + + G + T+ L AC S+
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190
Query: 125 SL--LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
S+ L+ G+++H ++R G++G+V V L+D Y + V A VF + DKN VSW +
Sbjct: 191 SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSA 250
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N ++F E + P + SVL ACA +A LE G+ VHA ++
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR 310
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V + L+ MYG+CG I + F+ M +R+++ WN++I Y G A+
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M + P+Y+T + VL ACS AG VE+ +F SM KY I P EHYAC+VD+
Sbjct: 371 FENMINRGVS--PSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDI 428
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA +D A E+I+ M +P +VWG+LL +CR++ EL A+ LF+L+P ++GN+
Sbjct: 429 LGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNY 488
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLS+++A + W + VRK+++ G++K CSWI VK +I+ + + + + E+
Sbjct: 489 VLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELC 548
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A L L E+K GY+P TN YD++EEEK V HS K+A+AFGLI G IRI+
Sbjct: 549 AFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRIS 608
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCH+ KF+S RE+++RD NRFH F DG CSC DYW
Sbjct: 609 NNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 332/587 (56%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E I PN TF L + ++H L + G + + ++Y +
Sbjct: 353 MQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCES 412
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +FD++ NL +WN+ I V R +A+ F +++ G +PD + F L A
Sbjct: 413 PDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGA 472
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ S + + +H + SG G+ V LV+ Y K E+ +A+V+ + ++ +W
Sbjct: 473 CTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ Y + + + + E + SVL+AC L G+ +H+ AV+
Sbjct: 533 NVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 592
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ ++ V +AL +MY KCGS+++A F+ MP R+ V WN ++ YA G ++ L
Sbjct: 593 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 652
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+M E V N +T V VLS+CS AG + +G + F+S+ GI+ EHY C+VD
Sbjct: 653 IRKMEQ---EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 709
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG + A + I +MP+ P I W +LL ACRV + G++AA L +LDP +S
Sbjct: 710 LLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSA 769
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
V+LSN+++ G W+ A +R+ M +KK G S I VKN++H F+ +DTSH R EI
Sbjct: 770 SVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEI 829
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ +L M+ AGY+PDT L+DV+EE+K + + +HSEK+A+AFGLI+ P + I
Sbjct: 830 YDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHI 889
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+A KFIS I GRE++VRDN+RFH F DG CSC DYW
Sbjct: 890 FKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 192/358 (53%), Gaps = 6/358 (1%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+FVG + MY++ +DA ++F M + NL TW+A I+ G A+ F ++
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ G P+ +TF + LN + S L+ ++H + G D ++ N LV+ YG+C
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ VFD + N +SW SM+ +YVQ ++ Q+F T +++G++P ++L AC
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ + VH ++ + G+ V ++LV+MY K G + AE+ +M E+ + WN
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNV 534
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+I GYA G + AL ++++ ++ EA+P + VT + VL+AC+ + ++ +G K+ +S
Sbjct: 535 LINGYALHGRSREALEAYQK---LQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNA 590
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ G+ + ++ + G ++ A I MP+R +S W +L A +G+ E
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE 647
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 193/393 (49%), Gaps = 9/393 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ++PN T + + + G +HAL+L+ G + V + +MY K G
Sbjct: 49 MLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGT 108
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +F+EM E+N+ TWNA + L G K A++ F + G + ++ITF LN
Sbjct: 109 LLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLN 168
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ D L+ G+ +H + S +V V LV+ Y KC + A+ VFDG+ ++ +
Sbjct: 169 SVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGT 228
Query: 180 WCSMLVVYVQNYEEENGCQMFLTAR--REGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
W SM+ Y + E +G F+ R +EG S+L AC L+ G+ V
Sbjct: 229 WNSMISAY--SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRES 286
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ E ++FVG+AL+ MY +C S +DA F +M + NL+ W+AII +A GH A
Sbjct: 287 ISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEA 346
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F M +PN VT + +L+ + +E+ +I +T ++G+ +
Sbjct: 347 LRYFRMMQQEGI--LPNRVTFISLLNGFTTPSGLEELSRIHLLIT-EHGLDDTTTMRNAL 403
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V++ GR D A + ++ + P + W +++
Sbjct: 404 VNVYGRCESPDDARTVFDQLEL-PNLISWNSMI 435
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 205/449 (45%), Gaps = 5/449 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N TF + + GK +H+ +S DVFV + + Y+K G
Sbjct: 151 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 210
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD MP R++ TWN+ IS + R A F +++ G D +TF + L+A
Sbjct: 211 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDA 270
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C + LQ G+ + + + F+ ++ V L+ Y +C A VF + N ++W
Sbjct: 271 CVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITW 330
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + + + F ++EG+ P S+L+ +GLE +H + +
Sbjct: 331 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 390
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + +ALV++YG+C S DA F+++ NL+ WN++IG Y D AL
Sbjct: 391 HGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQL 450
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + P+ V + +L AC+ G+ + K+ + + G+ +V++
Sbjct: 451 FRTMQQQGIQ--PDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNM 507
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL-FKLDPNDSGN 419
+AG +D A I++EM I+ W L+N ++G+ A L + P D
Sbjct: 508 YAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVT 566
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGI 448
+ + N ++ E ++ + G+
Sbjct: 567 FISVLNACTSSTSLAEGKMIHSNAVECGL 595
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 7/292 (2%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MYS+ G DA F ++ RN+ +WN IS + A+ F + G P+ IT
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
A LN+C L+ G +H + GF N V L++ YGKC + A+ VF+ +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 174 DKNDVSWCSMLVVY-VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+KN V+W +ML VY +Q + ++F EGV+ +VL++ L G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H+ ++ ++FV +ALV+ Y KCGS+ DA F+ MP R++ WN++I Y+
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 293 HADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+ A F+ M RC+ VT + +L AC ++ G + S++
Sbjct: 241 RSGEAFFIFQRMQQEGERCDR----VTFLSILDACVNPETLQHGKHVRESIS 288
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y +C +G A F I +N VSW M+ Y + +F EGV P
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ +VL++C L G VHA++++ N V +AL++MYGKCG++ DA+ F +M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 275 ERNLVCWNAIIGGYAHQGHA-DMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVE 332
E+N+V WNA++G Y+ QG +A+ F T M E V N +T + VL++ A+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELF---TRMLLEGVKANVITFLNVLNSVVDPDALR 177
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
KG K +S + +V+ + G + A ++ MP R ++ W ++++A
Sbjct: 178 KG-KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSMISA 235
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/656 (35%), Positives = 343/656 (52%), Gaps = 73/656 (11%)
Query: 1 MRRECISPND--FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT 58
+R+ +SP + L K T K +H+ + +G Y+
Sbjct: 21 IRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAAR 80
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G A +FD +PERN+ +N I + + +A+ F ++ G PD T+ L
Sbjct: 81 GEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVL 140
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
ACS L++G QLHG + + G D N+ V NGL+ YGKC + A+ V D + K+ V
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVV 200
Query: 179 SWCSMLVVYVQNY----------------EEENGC---------------------QMFL 201
SW SM+ Y QN ++ + C +MF+
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFM 260
Query: 202 TARREGVEPKDFMIS-------------------------------SVLSACARIAGLEL 230
++ + + MIS SVL AC ++ L L
Sbjct: 261 NLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLL 320
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
GR +H + + N+ + ++L+DMY +CG ++DA+ F++M R++ W ++I Y
Sbjct: 321 GRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGM 380
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G A++ F EM + P+ + V +LSACS +G + +G F MT Y I P
Sbjct: 381 TGQGYNAVALFTEMQN--SGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPI 438
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EH+AC+VDLLGR+G VD AY IIK+MPM+P VWGALL++CRVY ++G +AAD L
Sbjct: 439 IEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLL 498
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+L P +SG +VLLSN++A GRW E +R MK I+K G S + + N++H F A D
Sbjct: 499 QLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGD 558
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
T H ++ EI L+ L +MK GY+P T+ AL+DVEEE+K + HSEK+A+ F ++
Sbjct: 559 TYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILN 618
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRITKNLR+CGDCH A K IS IV RE+++RD NRFH F DG CSC DYW
Sbjct: 619 TQES-PIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 333/589 (56%), Gaps = 9/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + ++ +F + K + L +QLH +K G + D + + YSK
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349
Query: 61 KDDADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA ++F E N+ +W A IS + + A+ F ++R G P+ T+ L
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILT 409
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A S ++H +V++ ++ + +V L+D Y K +V A VF GI +K+ V+
Sbjct: 410 ALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVA 465
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA-RIAGLELGRSVHAVA 238
W +ML Y Q E E ++F + GV+P +F SS+L+ CA A + G+ H A
Sbjct: 466 WSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFA 525
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K+ ++ ++ V SAL+ MY K G I+ AE F + E++LV WN++I GYA G A AL
Sbjct: 526 IKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 585
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+EM + + + VT + V +AC+ AG VE+G K F M I P EH +C+V
Sbjct: 586 DVFKEMKKRKVKM--DSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 643
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DL RAG +++A ++I MP ++W +L ACRV+ K ELGR+AA+ + + P DS
Sbjct: 644 DLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSA 703
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VLLSNM+A +G W+E VRK M + +KK G SWI VKN+ + F A D SH +
Sbjct: 704 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQ 763
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L L +K GY PDT++ L D+++E K + HSE++A+AFGLIA P G P+
Sbjct: 764 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 823
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF-WDGYCSCSDYW 586
I KNLR+CGDCH K I+ I RE++VRD+NRFH F DG CSC D+W
Sbjct: 824 IIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 10/400 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN FTF + + G Q+H + +K+G + V S ++Y K G
Sbjct: 189 MQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 248
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD+ +++ TWN+ IS G A+ F ++R +F + +
Sbjct: 249 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKL 308
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDKNDV 178
C++ L+ QLH +V+ GF + ++ L+ Y KC + A +F G + N V
Sbjct: 309 CANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLG-NVV 367
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ ++QN +E +F +R+GV P +F S +L+A I+ E VHA
Sbjct: 368 SWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQV 423
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
VK E + VG+AL+D Y K G + +A F+ + +++V W+A++ GYA G + A+
Sbjct: 424 VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAI 483
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F E+T + PN T +L+ C+ A K F+ +K + + ++
Sbjct: 484 KIFSELT--KGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALL 541
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ + G ++ A E+ K + +S W ++++ +G+
Sbjct: 542 TMYAKKGHIESAEEVFKRQREKDLVS-WNSMISGYAQHGQ 580
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 176/389 (45%), Gaps = 9/389 (2%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F + K S+ L + G+QLH +K G + DV VG S D Y K D +FDEM
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
ERN+ TW IS + + F+ ++ G +P+ TF A L ++ + G Q
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H +V++G D + V N L++ Y KC V A+++FD K+ V+W SM+ Y N
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ MF + R V + +S++ CA + L +H VK + + +A
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 253 LVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
L+ Y KC ++ DA F + N+V W A+I G+ + A+ F EM R
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMK--RKGV 397
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PN T +L+A E ++ +K + + ++D + G VD A
Sbjct: 398 RPNEFTYSVILTALPVISPSE-----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAA 452
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + + ++ W A+L G+ E
Sbjct: 453 KVFSGIDNKDIVA-WSAMLAGYAQAGETE 480
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 124/241 (51%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD+ P+R+ ++ + + GR + A F+N++ G E D F + L +
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
GRQLH ++ GF +VSV LVD Y K + + VFD + ++N V+W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y +N E +F+ + EG +P F ++ L A G VH V VK +
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ I V ++L+++Y KCG+++ A I F+K +++V WN++I GYA G AL F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 304 M 304
M
Sbjct: 290 M 290
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 330/618 (53%), Gaps = 34/618 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
+RR + F+FP L KA S L G ++H LA K G H D F+ + MY+ G
Sbjct: 106 LRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACG 165
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +FD+M R++ TWN I + + + ++ +G EPD I C L+
Sbjct: 166 RIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLS 225
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK------------- 166
AC+ L G+ +H F+ +GF + LV+ Y C + LA+
Sbjct: 226 ACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVV 285
Query: 167 ------------------VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+FD +++K+ V W +M+ Y ++Y+ Q+F +R +
Sbjct: 286 STAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRI 345
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + SV+SACA + L + +H A K + + +AL+DMY KCG++ A
Sbjct: 346 VPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKARE 405
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F MP +N++ W+++I +A G AD A++ F M E PN VT + VL ACS A
Sbjct: 406 VFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIE--PNGVTFIGVLYACSHA 463
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VE+G K F SM ++ I P EHY C+VDL RA + +A E+I+ MP P + +WG+
Sbjct: 464 GLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGS 523
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
L++AC+ +G+ ELG AA L +L+P+ G V+LSN++A RW++ LVRK MK G+
Sbjct: 524 LMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGV 583
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K CS I V N +H+F D H+++ EI L + ++K GY P T+ L D+EE
Sbjct: 584 SKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEE 643
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK V HSEK+AL +GLI IRI KNLRIC DCHS K +S + E+++RD
Sbjct: 644 EEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRD 703
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 704 RTRFHHFNGGICSCRDYW 721
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 172/368 (46%), Gaps = 36/368 (9%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +F +P N + G P+N + +++LRR G D +F L A
Sbjct: 66 DYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAV 125
Query: 122 SDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S S L LG ++HG + G F + + + L+ Y C + A+ +FD + ++ V+W
Sbjct: 126 SKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTW 185
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y QN ++ +++ + G EP ++ +VLSACA L G+++H
Sbjct: 186 NIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKD 245
Query: 241 ACVEGNIFVGSALVDMYGKCGS-------------------------------IQDAEIA 269
+ ++LV+MY CG+ +QDA
Sbjct: 246 NGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFI 305
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M E++LVCW+A+I GYA AL F EM R VP+ +T++ V+SAC+ G
Sbjct: 306 FDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRI--VPDQITMLSVISACANVG 363
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+ + K ++ K G ++D+ + G + +A E+ + MP + IS W ++
Sbjct: 364 ALVQA-KWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVIS-WSSM 421
Query: 390 LNACRVYG 397
+NA ++G
Sbjct: 422 INAFAMHG 429
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/579 (39%), Positives = 325/579 (56%), Gaps = 41/579 (7%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FT+P LFKA +A G Q+HA +K G DV + + MY G + A +M
Sbjct: 128 PNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRM 187
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
E G D+I F A ++ C +
Sbjct: 188 LGE-----------------------------------DGNSDVICFNAMIDGYLKCGEV 212
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ ++L S D NV N +V KC + A+ +F+ + +KN++SW +M+ Y
Sbjct: 213 EAAKEL----FWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGY 268
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
++ + ++F +RE + P+ F++SSVL+ACA + L+ GR +HA +
Sbjct: 269 IKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDA 328
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+G+ALVDMY KCG + A F KM ++ + WNA+I G G A+ A+ F +M
Sbjct: 329 VLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQ 388
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ PN +TL+ VLSAC+ +G V++G++IF SM YGI+PG EHY CVVDLLGRAGL+
Sbjct: 389 KFR--PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLL 446
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
A E++ MPM P+ +VWGALL ACR +G ELG L +L+P +SG + LLSN++
Sbjct: 447 GEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIY 506
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A GRW++ VRK MK+ G+K G S I +H F+ D SH + I ML +
Sbjct: 507 ARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMI 566
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+ +K G+ P+T+ L+D+EEEEK E+ +HSEK+A+AFGLI PG I + KNLR+C
Sbjct: 567 KRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCE 626
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCHSAFK IS + RE+IVRD R+H F G CSC D+W
Sbjct: 627 DCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 22/340 (6%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFD 170
T LN S SL L +Q+H +R+G + V LV Y + + A VF+
Sbjct: 30 TILDLLNTKSSTSLHHL-KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFE 88
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ + N + ++ +QN E + P F ++ AC E
Sbjct: 89 YVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEE 148
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G VHA +K + G++ + SA + MYG G ++ A + +++C+NA+I GY
Sbjct: 149 GVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLK 208
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G + A F SM + V ++ +V ++ C G +E+ ++F M K I
Sbjct: 209 CGEVEAAKELF---WSMEDKNVGSWNVMVSGMAKC---GMIEEARELFNEMKEKNEIS-- 260
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAAD 407
++ ++D + G A E+ M +RP V ++L AC G + GR
Sbjct: 261 ---WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWI-- 315
Query: 408 NLFKLDPNDSGNHVL---LSNMFAATGRWEEADLVRKEMK 444
+ + + ++S + VL L +M+A GR + A V ++M+
Sbjct: 316 HAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKME 355
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE I P F + A + L G+ +HA + D +G + DMY+K G
Sbjct: 284 MQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGR 343
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +F++M ++ + TWNA I + GR ++AI+ F +++ P+ IT L+A
Sbjct: 344 LDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
C+ ++ G ++ + G + + +VD G+ +G A +V++ ++ +
Sbjct: 404 CAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAA 463
Query: 179 SWCSML 184
W ++L
Sbjct: 464 VWGALL 469
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/564 (39%), Positives = 326/564 (57%), Gaps = 8/564 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H A SG + +V VG + MY K G DDA F+E+ +N TWNA ++N L
Sbjct: 50 GREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKL 109
Query: 89 GGRPKNAIDAFINL--RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG--FDG 144
GR + A++ F + R PD +F + ACS+ L+ GR++H L R G
Sbjct: 110 DGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHK 169
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+V V L++ Y KC ++ A+ VFD I D + V W +M+ Y Q+ + ++ +
Sbjct: 170 DVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 229
Query: 204 R-REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ PK +V+ CA ++ L+ GR++HA + N+ V +ALV MYGKCG
Sbjct: 230 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 289
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ +A F+ M ++ + WN II YA+ GH+D AL ++EM + P VT V +L
Sbjct: 290 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVK--PTEVTFVGLL 347
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SACS G V G+ FY M + IKP H+ C++DLLGR G + A ++K MP++
Sbjct: 348 SACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 407
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
W +LL AC+ +G + G AAD + P SG +VLLSN++AA GRW++ + +RK
Sbjct: 408 AVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKI 467
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
M G+KK G SWI + + +H F + D SH + EI L K+ EEMK GY+PDT+
Sbjct: 468 MAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSV 527
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
+D+EEEEK + HSEK+A+ +G + +P +RI KNLR+C DCH+A KF+S I GR
Sbjct: 528 FHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGR 587
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
+++VRD RFH F +G CSC DYW
Sbjct: 588 KIVVRDAARFHLFENGSCSCRDYW 611
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 168/349 (48%), Gaps = 6/349 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIH-DVFVGCSAFDMYSKTG 59
R P+ F+F +A S L G+++H + + G ++H DV VG + +MYSK G
Sbjct: 126 RSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCG 185
Query: 60 LKDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAF 117
++A K+FD + + + WNA I+ GR K A+D + ++ T P TF
Sbjct: 186 DLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTV 245
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
++ C++ S L+ GR +H + + FD N+ V N LV YGKC + A VF + K++
Sbjct: 246 IDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 305
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHA 236
+SW +++ Y + + ++ +GV+P + +LSAC+ + G +
Sbjct: 306 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 365
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ ++ ++ ++D+ G+ G + +AE+ MP + N V W +++G G
Sbjct: 366 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 425
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ + +++ YV L + +A R VEK KI + +K
Sbjct: 426 RGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVK 474
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 10/314 (3%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL--GRQLHGFLVRSGFDGNVSVCNG 151
A+ F + ++G PD +TF L A + + GR++H + SG NV V
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVE 209
++ YGKC + A+ F+ + KN V+W +M+ Y + + ++F + R
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVE--GNIFVGSALVDMYGKCGSIQDAE 267
P F S + AC+ + LE GR +H + + E ++ VG+AL++MY KCG +++A
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191
Query: 268 IAFNKM-PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F+ + + + VCWNA+I YA G AL + M + P T V V+ C+
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDT-TDLAPKQGTFVTVIDVCA 250
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
A+++G I ++ +V + G+ G +D A ++ M ++ IS W
Sbjct: 251 ELSALKQGRAI-HARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEIS-W 308
Query: 387 GALLNACRVYGKPE 400
++++ +G +
Sbjct: 309 NTIISSYAYHGHSD 322
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 352/633 (55%), Gaps = 70/633 (11%)
Query: 4 ECISPNDFTFPCLFKASSALH--IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
C PND F LF+ + + +P T ++ L + SG + FVG + DMY+K G
Sbjct: 35 HCFVPNDAVF--LFREMTVGYGILPDTVGVVNILPV-SGFL-GFFVGNALVDMYAKCGKM 90
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE------------- 108
+DA K+F+ M +++ TWNA ++ GR ++A+ F +R E
Sbjct: 91 EDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGY 150
Query: 109 ----------------------PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-- 144
P+++T + L+AC+ L G++ H + V+ G
Sbjct: 151 AQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEH 210
Query: 145 -----NVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGC 197
+++V N L+D Y KC + +A+ +FD I D++ V+W M+ Y Q+ + +
Sbjct: 211 NDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHAL 270
Query: 198 QMFLTARR--EGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNI-FVGSAL 253
Q+F + + P DF IS VL ACAR+A L+ G+ +HA V ++ ++ ++ FV + L
Sbjct: 271 QLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCL 330
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+DMY K G + A++ F+ M +RN V W +++ GY G A V
Sbjct: 331 IDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAA----------------LVL 374
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ +T + VL ACS +G V++G+ +FY M+ + + PG EHYAC+ DL GRAG + A +
Sbjct: 375 DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRL 434
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRW 433
I +M M PT VW ALL+ACR + EL AA L +L ++ G + LLSN++A RW
Sbjct: 435 INDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRW 494
Query: 434 EEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA 493
++ +R MK GIKK G SW+ + + F D +H ++ +I L L + +KA
Sbjct: 495 KDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKAI 554
Query: 494 GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAF 553
GY+P TNF+L+DV++EEK ++ HSEK+ALA+ ++ +PPG PIRITKNLRICGD HSA
Sbjct: 555 GYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAI 614
Query: 554 KFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+IS IV E+I+RD++RFH+F +G CSC YW
Sbjct: 615 TYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 328/578 (56%), Gaps = 2/578 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N++ A++ + G+Q H A+K+G +V + MY + +DA K+F
Sbjct: 107 NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVF 166
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ + + +N+ I+ + G+ ++ N+ + D +++ A L C+
Sbjct: 167 ESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSV 226
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LG Q+H ++ + NV V + LVD YGKC+ V A F+ + +KN VSW +++ Y
Sbjct: 227 LGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYT 286
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN E+ Q+FL EGV+P +F + L++CA +A L G ++ A +K ++
Sbjct: 287 QNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLL 346
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +AL++MY K GSI+DA F MP R++V WN II GYAH G A + +F M S
Sbjct: 347 VSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLS-- 404
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
+P+YVT V VLSAC++ G V++ +M + GI PG EHY C+V LL R G +D
Sbjct: 405 AAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLD 464
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
A I + + W +LLN+C+VY LG A+ + +L+P+D G +VLLSNM+A
Sbjct: 465 EAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYA 524
Query: 429 ATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLRE 488
RW+ VRK M++ ++K G SWI V + +H+F +++ H + +I L +L +
Sbjct: 525 KANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELID 584
Query: 489 EMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGD 548
++KA GY+P+ L+D+++E K + +HSEK+ALAFGLI P G I I KNLRIC D
Sbjct: 585 QIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDD 644
Query: 549 CHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CH A K IS + R+++VRD RFH G CSC+DYW
Sbjct: 645 CHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 194/428 (45%), Gaps = 16/428 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK LHA + + DV + + Y+K G A +FD MP RN + N +S
Sbjct: 30 GKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYAS 88
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR K ++ LR + A ++A ++ +GRQ HG+ V++GF V
Sbjct: 89 SGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYV 145
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N ++ Y +C + A VF+ + + ++ SM+ Y+ + + + E
Sbjct: 146 FNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAE 205
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +VL CA + LG VHA A+K +E N++VGSALVDMYGKC + DA
Sbjct: 206 KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANR 265
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
AF +PE+N+V W A++ Y + AL F + M E V PN T L++C+
Sbjct: 266 AFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLD---MEMEGVQPNEFTYAVALNSCAG 322
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A+ G + +K G ++++ ++G ++ A+ + MP+R +S W
Sbjct: 323 LAALRTG-NALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVS-WN 380
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD----LVRKEM 443
++ +G G A ++ L ++V + +A + D + M
Sbjct: 381 LIITGYAHHGLAREGMEAFHSM--LSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMM 438
Query: 444 KDVGIKKG 451
K+VGI G
Sbjct: 439 KEVGITPG 446
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 15/277 (5%)
Query: 127 LQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+ LH L+ + FD V + N L+ FY KC VGLA+ VFD + +N VS ++
Sbjct: 27 LSKGKALHARLITAAHFD--VVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + Q+ R ++++S+ +SA A + ++GR H AVKA
Sbjct: 85 GYASSGRHKESLQLL---RVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+V +A++ MY +C ++DA F + + +N++I GY +G D +L MT
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201
Query: 306 SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
EA +YV+ V VL C+ G ++ ++ LK ++ + +VD+ G+
Sbjct: 202 G---EAEKWDYVSYVAVLGHCASMKDSVLGAQV-HAQALKKRLELNVYVGSALVDMYGKC 257
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
V A + +P + +S W A++ A Y + EL
Sbjct: 258 DHVHDANRAFEVLPEKNVVS-WTAVMTA---YTQNEL 290
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN+FT+ + + L TG L A +K+G + V + +MYSK+G
Sbjct: 301 MEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGS 360
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F MP R++ +WN I+ G + ++AF ++ P +TF L+A
Sbjct: 361 IEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSA 420
Query: 121 CSDCSLLQ-----LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
C+ L+ L + + G + + + GL+ G+ +E + + + I
Sbjct: 421 CAQLGLVDEAFYYLNTMMKEVGITPGKE-HYTCMVGLLCRVGRLDEA--ERFIVNNCIGT 477
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMF 200
+ V+W S+L N CQ++
Sbjct: 478 DVVAWRSLL----------NSCQVY 492
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 322/545 (59%), Gaps = 13/545 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + Y + G +A +FDEMP+RN+ +W A IS G A F
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF---- 228
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E + +++ A L ++ +L + + V+ CN ++ +G+ V
Sbjct: 229 EVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP----EHPVAACNAMMVGFGQRGMVD 284
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
AK VF+ + +++D +W +M+ Y QN F GV P + S+L+ CA
Sbjct: 285 AAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A L+ GR VHA ++ + ++F SAL+ MY KCG++ A+ F+ +++V WN+
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+I GYA G + AL F +M R + P+ +T + L+ACS G V++G +IF SMT
Sbjct: 405 MITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ I+PGAEHY+C+VDLLGR+GLV+ A+++IK MP+ P +WGAL+ ACR++ E+
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
+AA L +L+P ++G +VLLS+++ + GRWE+A +RK + + K GCSWI R
Sbjct: 522 EVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 463 IHIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+H+F + D +H + I +L KL + +GY D +F L+D++EE+K + +HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
A+A+GL+ IP G+PIR+ KNLR+CGDCHSA K I+ I RE+++RD NRFH F DG+CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCS 701
Query: 582 CSDYW 586
C DYW
Sbjct: 702 CRDYW 706
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 147/343 (42%), Gaps = 51/343 (14%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + GL DA ++F +MPERN ++ + + GR A F + + D++ +
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAW 177
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A L+ + R L + + NV ++ Y + EV LA+ +F+ + +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N+VSW +MLV Y+Q E+ ++F + M ++AC
Sbjct: 234 RNEVSWTAMLVGYIQAGHVEDAAELF-----------NAMPEHPVAAC------------ 270
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+A++ +G+ G + A+ F KM ER+ W+A+I Y
Sbjct: 271 ----------------NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFL 314
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
ALS+F EM PNY +++ +L+ C+ ++ G ++ +M L+
Sbjct: 315 MEALSTFREMLWRGVR--PNYPSVISILTVCAALAVLDYGREVHAAM-LRCSFDMDVFAV 371
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++ + + G +D+A + + I +W +++ +G
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG 413
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + +AL + G+++HA L+ DVF + MY K G D A
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +++ WN+ I+ G + A+ F ++R G PD IT+ L ACS
Sbjct: 389 RVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 126 LLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKNDVSW 180
++ GR++ + V S + +VD G+ GL + FD I ++ + V W
Sbjct: 449 KVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRS---GLVEEAFDLIKNMPVEPDAVIW 505
Query: 181 CSML 184
+++
Sbjct: 506 GALM 509
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT----- 305
+A + + G+I+ A AF MP R +NA++ GY D AL F M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 306 ---------SMRCEAVPN-------------YVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
S+R + +P+ V+ +L R G + +++F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+ + Y ++ L AG V+ A + EMP R ++ W A+L+ G + GR
Sbjct: 141 RNHVS-----YTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLS-----GYCQAGR 189
Query: 404 IA-ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
I A LF P N V + M + + E +L RK
Sbjct: 190 ITEARALFDEMPKR--NVVSWTAMISGYAQNGEVNLARK 226
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 346/618 (55%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + + T+ A + L GKQLHA ++S D +V + ++Y+K G
Sbjct: 251 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 310
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F+ + +RN +W I ++ +++ F +R D ++
Sbjct: 311 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 370
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF----------- 169
C + L LGRQLH ++SG + + V N L+ Y KC ++ A+ VF
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 430
Query: 170 --------------------DGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
DG+ +N ++W +ML Y+Q+ EE+G +M+ ++ V
Sbjct: 431 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 490
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA I +LG + VKA + N+ V +A + MY KCG I +A+
Sbjct: 491 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 550
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A +F++M S A P+Y++ V VLS CS +
Sbjct: 551 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK--GAKPDYISYVAVLSGCSHS 608
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F MT +GI PG EH++C+VDLLGRAG + A ++I +MPM+PT VWGA
Sbjct: 609 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 668
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++LL+ +++ G+ +++ VRK M+D GI
Sbjct: 669 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 728
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V+N++H+F+A D SH + I+ + +L E++ GY V
Sbjct: 729 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY----------VRT 778
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E +E+ HHSEK+A+AFG++++P +PI I KNLRICGDCH+ K IS + RE ++RD
Sbjct: 779 ESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRD 837
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 838 GVRFHHFKSGSCSCGDYW 855
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR 104
+F S Y+K D A + F++M ER++ +WN I+ GR + A+ + + R
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G D T+ + L AC+ L G+QLH ++RS + V + L++ Y KC
Sbjct: 254 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
AK VF+ + D+N VSW ++ +Q ++F R E + F +++++S C
Sbjct: 314 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
L LGR +H++ +K+ I V ++L+ +Y KCG +Q+AE F+ M ER++V W ++
Sbjct: 374 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 433
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I Y+ G+ A F+ M A N +T +L A + GA E G+K++ +M +
Sbjct: 434 ITAYSQIGNIIKAREFFDGM------ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 345 YGIKP 349
+ P
Sbjct: 488 KDVTP 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 154/370 (41%), Gaps = 62/370 (16%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+K G DA+++FD MP R++A+WN +S+ RP +
Sbjct: 97 YAKQGSLSDAEELFDRMPRRDVASWNTLMSDT---SRPAGS------------------- 134
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-- 172
+C +L QL G + F G+ V LVD + +C V A +F I
Sbjct: 135 ---WMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191
Query: 173 -----------------------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+++ VSW M+ Q+ + +
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
R+GV +S L+ACAR+ L G+ +HA +++ + + +V SAL+++Y KCGS
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVL 322
++A+ FN + +RN V W +IGG + S E MR E + + L ++
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQY---ECFSKSVELFNQMRAELMAIDQFALATLI 368
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
S C + G ++ +S+ LK G ++ L + G + A + M R
Sbjct: 369 SGCFNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 427
Query: 383 ISVWGALLNA 392
+S W +++ A
Sbjct: 428 VS-WTSMITA 436
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 45/335 (13%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG-IIDKN 176
L +C L R LHG LV G V + N L+ Y C + A+ + I + N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV------LSACARIAGLEL 230
++ M+ Y + + ++F R V + ++S +C + EL
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
+ + K G+ V +ALVDM+ +CG + A F+++ + C N+++ GYA
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
D A+ FE+M A + V+ +++A S++G V + + + M K G++
Sbjct: 207 LYGIDHAIEYFEDM------AERDVVSWNMMIAALSQSGRVREALGLVVEMHRK-GVRLD 259
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+ Y + R + WG L+A + P++ A L
Sbjct: 260 STTYTSSLTACARLFSLG-----------------WGKQLHAKVIRSLPQIDPYVASALI 302
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
+L +A G ++EA V ++D
Sbjct: 303 EL--------------YAKCGSFKEAKRVFNSLQD 323
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 321/545 (58%), Gaps = 13/545 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + Y + G +A +FDEMP+RN+ +W A IS G A F
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF---- 228
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E + +++ A L ++ +L + + V+ CN ++ +G+ V
Sbjct: 229 EVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP----EHPVAACNAMMVGFGQRGMVD 284
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
AK VF+ + +++D +W +M+ Y QN F GV P + S+L+ CA
Sbjct: 285 AAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A L+ GR VHA ++ + ++F SAL+ MY KCG++ A+ F+ +++V WN+
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+I GYA G + AL F +M R + P+ +T + L+ACS G V++G +IF SMT
Sbjct: 405 MITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ I+PGAEHY+C+VDLLGR+GLV+ A+++IK MP+ P +WGAL+ ACR++ E+
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
AA L +L+P ++G +VLLS+++ + GRWE+A +RK + + K GCSWI R
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 463 IHIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+H+F + D +H + I +L KL + +GY D +F L+D++EE+K + +HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
A+A+GL+ IP G+PIR+ KNLR+CGDCHSA K I+ I RE+I+RD NRFH F DG+CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCS 701
Query: 582 CSDYW 586
C DYW
Sbjct: 702 CRDYW 706
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 51/346 (14%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + GL DA ++F +MPERN ++ + + GR A F + + D++ +
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAW 177
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A L+ + R L + + NV ++ Y + EV LA+ +F+ + +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N+VSW +MLV Y+Q E+ ++F + M ++AC
Sbjct: 234 RNEVSWTAMLVGYIQAGHVEDAAELF-----------NAMPEHPVAAC------------ 270
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+A++ +G+ G + A+ F KM ER+ W+A+I Y
Sbjct: 271 ----------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFL 314
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
ALS+F EM PNY +++ +L+ C+ ++ G ++ +M L+
Sbjct: 315 MEALSTFREMLWRGVR--PNYPSVISILTVCAALAVLDYGREVHAAM-LRCSFDMDVFAV 371
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ ++ + + G +D+A + + I +W +++ +G E
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHGLGE 416
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + +AL + G+++HA L+ DVF + MY K G D A
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +++ WN+ I+ G + A+ F ++R G PD IT+ L ACS
Sbjct: 389 RVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 126 LLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKNDVSW 180
++ GR++ + V S + +VD G+ GL + FD I ++ + V W
Sbjct: 449 KVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRS---GLVEEAFDLIKNMPVEPDAVIW 505
Query: 181 CSML 184
+++
Sbjct: 506 GALM 509
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT----- 305
+A + + G+I+ A AF MP R +NA++ GY D AL F M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 306 ---------SMRCEAVPN-------------YVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
S+R + +P+ V+ +L R G + +++F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+ + Y ++ L AG V+ A + EMP R ++ W A+L+ G + GR
Sbjct: 141 RNHVS-----YTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLS-----GYCQAGR 189
Query: 404 IA-ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
I A LF P N V + M + + E +L RK
Sbjct: 190 ITEARALFDEMPKR--NVVSWTAMISGYAQNGEVNLARK 226
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 326/563 (57%), Gaps = 7/563 (1%)
Query: 30 KQLHALALKSG-QIHDVFVGCS-AFDMYSKTGLK--DDADKMFDEMPER-NLATWNAYIS 84
+Q+HA +++ G I D +G F + S A K+F ++ + N+ WN I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 85 NAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G +A + +R +G EPD T+ + A + + ++LG +H ++RSGF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ V N L+ Y C +V A VFD + +K+ V+W S++ + +N + E ++
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+G++P F I S+LSACA+I L LG+ VH +K + N+ + L+D+Y +CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
++A+ F++M ++N V W ++I G A G A+ F+ M S +P +T V +L
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG-LLPCEITFVGILY 332
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS G V++G + F M +Y I+P EH+ C+VDLL RAG V +AYE IK MPM+P +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W LL AC V+G +L A + +L+PN SG++VLLSNM+A+ RW + +RK+M
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
G+KK G S + V NR+H F D SH ++ I A L ++ +++ GY+P +
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 512
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
DVEEEEK V +HSEKIA+AF LI+ P PI + KNLR+C DCH A K +S + RE
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
++VRD +RFH F +G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 174/353 (49%), Gaps = 15/353 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T+P L KA + + G+ +H++ ++SG ++V S +Y+ G A
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD+MPE++L WN+ I+ G+P+ A+ + + G +PD T + L+AC+
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+++H ++++ G N+ N L+D Y +C V AK +FD ++DKN VSW S++V
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 186 VYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIA----GLELGRSVHAVAVK 240
N + ++F EG+ P + +L AC+ G E R + +
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE---E 353
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+E I +VD+ + G ++ A MP + N+V W ++G G +D+A
Sbjct: 354 YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEF 413
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PG 350
+ ++ + +YV L + ++ R V+K K L+ G+K PG
Sbjct: 414 ARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK----QMLRDGVKKVPG 462
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ FT L A + + GK++H +K G ++ D+Y++ G
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
++A +FDEM ++N +W + I + G K AI+ F + T G P ITF L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 120 ACSDCSLLQLG 130
ACS C +++ G
Sbjct: 333 ACSHCGMVKEG 343
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/519 (40%), Positives = 312/519 (60%), Gaps = 10/519 (1%)
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F++MP +++A+WN IS G+ + A D F + G +++ A ++ + L
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNG----VSWSAMISGYVEHGDL 214
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ +L+ ++ +V V ++ Y K +V LA+ +F + KN V+W SM+ Y
Sbjct: 215 EAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V+N E+G ++F T V P +SSVL C+ ++ L LGR +H + K+ + +
Sbjct: 271 VENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
++L+ MY KCG + A F +MP ++++ WNA+I GYA G AL F++M +
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNG 390
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+++T V V+ AC+ AG V+ G++ F SM ++GI+ HY CV+DLLGRAG +
Sbjct: 391 TMK--PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D A +IKEMP +P +++G LL ACR++ +L AA NL LDP + +V L+N++
Sbjct: 449 DEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIY 508
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AAT +W++ VRK MK+ + K G SWI +K+ H F++ D H T I L +L
Sbjct: 509 AATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELD 568
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+MK AGY+PD FAL+DVEEE K + HSEK+A+AFGL+ PG PIR+ KNLR+CG
Sbjct: 569 GKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCG 628
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A KFIS I RE+IVRD RFH F +G+CSC DYW
Sbjct: 629 DCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 140/302 (46%), Gaps = 2/302 (0%)
Query: 38 KSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAID 97
K+ + V V + Y K G + A+++F M +NL TWN+ I+ V R ++ +
Sbjct: 222 KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLK 281
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
F + + P+ ++ + L CS+ S L LGRQ+H + +S + + C L+ Y
Sbjct: 282 VFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC ++ A +F + K+ +SW +M+ Y Q+ +F R ++P +
Sbjct: 342 KCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVA 401
Query: 218 VLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-E 275
V+ AC ++LG + ++ + +E + ++D+ G+ G + +A +MP +
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+ + ++G + D+A + + ++ + YV L + +A ++ V K
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVR 521
Query: 336 KI 337
K+
Sbjct: 522 KM 523
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T +F+ AC S + ++ VR+ N ++ +G GK E A +FD I
Sbjct: 79 TIASFVRACDLESARNVFEKMS---VRTTVTWN-TMLSGYTKVAGKVKE---AHELFDKI 131
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTA---------------RREGVEPKDFMISS 217
+ + VS+ MLV Y+++Y E F + G K F + S
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 218 VL------SACARIAG------LELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V+ S A I+G LE ++ V +K+ V V +A++ Y K G ++
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVV-----VETAMLTGYMKFGKVE 246
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
AE F +M +NLV WN++I GY A+ L F+ M R PN ++L VL
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR--PNPLSLSSVLLG 304
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS A+ G ++ + + K + ++ + + G +D A+++ EMP + IS
Sbjct: 305 CSNLSALPLGRQM-HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVIS 363
Query: 385 VWGALLNACRVYG 397
W A+++ +G
Sbjct: 364 -WNAMISGYAQHG 375
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + S L G+Q+H L KS D S MY K G D A
Sbjct: 291 VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAW 350
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F EMP +++ +WNA IS G + A+ F +R +PD ITF A + AC+
Sbjct: 351 KLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 126 LLQLGRQ 132
+ LG Q
Sbjct: 411 FVDLGVQ 417
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAH-QGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
++ A F KM R V WN ++ GY G A F+++ ++V + LVC
Sbjct: 89 LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP--EPDSVSYNIMLVCY 146
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L R+ VE + F M +K + ++ + G + +A+++ MP +
Sbjct: 147 L----RSYGVEAALAFFNKMPVK-----DIASWNTLISGFAQNGQMQKAFDLFSVMPEKN 197
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFK 411
+S W A+++ +G E AA+ L+K
Sbjct: 198 GVS-WSAMISGYVEHGDLE----AAEELYK 222
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 328/558 (58%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+HA + + VF+G MY + G DDA + D MPER++ +W IS
Sbjct: 61 GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R A+D FI + R G P+ T L +CS + G+Q+H LV++ F+ ++ V
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K + A+ VFD + +++ VS +++ Y Q +E +F EG+
Sbjct: 181 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 240
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +++++A + +A L+ G+ VHA+ ++ + + + ++L+DMY KCG + +
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 300
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M ER++V WNA++ GY G +S F+++ E P+ VTL+ VLS CS
Sbjct: 301 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK---EVKPDSVTLLAVLSGCSHG 357
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G+ IF ++ + HY C++DLLGR+G +++A +I+ MP T S+WG+
Sbjct: 358 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 417
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACRV+ +G + A L +++P ++GN+V+LSN++AA G W++ VRK M + +
Sbjct: 418 LLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 477
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K G SWI + IH F + + H +I A + ++ ++KAAG++PD + L+DV++
Sbjct: 478 TKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDD 537
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E+K + HSEK+A+ FGL+ PPG+ IR+ KNLRIC DCH+ KF+S + RE+ +RD
Sbjct: 538 EQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRD 597
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH G C+C DYW
Sbjct: 598 KNRFHLLTHGNCTCGDYW 615
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 14/350 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R CI PN++T + + S GKQ+H+L +K+ +FVG S DMY+K+
Sbjct: 135 LRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++FD +PER++ + A IS G + A+D F L G + + +TF + A
Sbjct: 194 IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H ++R V++ N L+D Y KC ++ ++ VFD +++++ VSW
Sbjct: 254 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML+ Y ++ +F +E V+P + +VLS C+ ++ G + VK
Sbjct: 314 NAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 372
Query: 241 ACVEGNIFVGSA----LVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
E + + + ++D+ G+ G ++ A MP E W +++G A + HA+
Sbjct: 373 ---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG--ACRVHAN 427
Query: 296 MALSSF--EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+ + +++ M E NYV L + +A V K K+ T+
Sbjct: 428 VHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 477
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 12/298 (4%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
A + AC + L GRQ+H ++ + + V + LV Y +C + A+ V D + ++
Sbjct: 47 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VSW +M+ Y Q +F+ R G P ++ +++VL++C+ + G+ VH
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ VK E ++FVGS+L+DMY K +IQ+A F+ +PER++V AII GYA +G +
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226
Query: 296 MALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL F ++ S M+C N+VT +++A S +++ G ++ +++ L+ +
Sbjct: 227 EALDLFRQLYSEGMQC----NHVTFTTLVTALSGLASLDYGKQV-HALILRKELPFFVAL 281
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
++D+ + G + + + M R +S W A+L YG+ LG +LFK
Sbjct: 282 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVS-WNAMLMG---YGRHGLGH-EVISLFK 334
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 321/546 (58%), Gaps = 28/546 (5%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G+ +A K+FD+MPERN+ +W A I V G + A F + E +++++
Sbjct: 35 YVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRM----PERNVVSW 90
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL--AKVVFDGI 172
L + + RQL + + ++ +GL C+E L A+ +FD +
Sbjct: 91 TVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGL------CSEGRLIEAREIFDEM 144
Query: 173 IDKNDVSWCSMLV-------------VYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
+N V+W SM+ +Y + E +F +REGV P + SVL
Sbjct: 145 PQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVL 204
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
S C +A L+ GR VH+ V++ + +I+V S L+ MY KCG + A+ F++ +++V
Sbjct: 205 SVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIV 264
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
WN+II GYA G + AL F +M S P+ +T + VLSACS G V++G++IF
Sbjct: 265 MWNSIIAGYAQHGFGEKALEVFHDMFS--SSIAPDEITFIGVLSACSYTGKVKEGLEIFE 322
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
SM KY + P EHYAC+VDLLGRAG ++ A +I+ MP+ VWGALL ACR +
Sbjct: 323 SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNL 382
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
+L IAA L +L+PN++G ++LLSN++++ RW++ +RK M+ ++K GCSWI V
Sbjct: 383 DLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEV 442
Query: 460 KNRIHIFQ-AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
++HIF TSH + I L KL ++ AGY PD +F ++DV+EEEK+ + H
Sbjct: 443 DKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDH 502
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+A+GL+ +P G+PIR+ KNLR+CGD HS K I+ + GRE+I+RD NRFH F DG
Sbjct: 503 SEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDG 562
Query: 579 YCSCSD 584
CSCSD
Sbjct: 563 LCSCSD 568
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 15/318 (4%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR---------- 91
+ DV + D G +A ++FDEMP+RN+ W + IS G
Sbjct: 115 VKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYER 174
Query: 92 ---PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A+ F ++R G P + + L+ C + L GRQ+H LVRS FD ++ V
Sbjct: 175 KGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYV 234
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+ Y KC ++ AK VFD K+ V W S++ Y Q+ E ++F +
Sbjct: 235 SSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSI 294
Query: 209 EPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P + VLSAC+ ++ G + ++ K V+ + +VD+ G+ G + +A
Sbjct: 295 APDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAM 354
Query: 268 IAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
MP E + + W A++G + D+A + +++ + Y+ L + S+ S
Sbjct: 355 NLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQS 414
Query: 327 RAGAVEKGMKIFYSMTLK 344
R V + K + L+
Sbjct: 415 RWKDVVELRKTMRAKNLR 432
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E N + LV Y + G I +A F+KMPERN+V W A+I GY +G + A F
Sbjct: 22 ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M N V+ +L G V++ ++F M +K + ++D L
Sbjct: 82 MPER------NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAS-----TNMIDGLCS 130
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G + A EI EMP R ++ W ++++
Sbjct: 131 EGRLIEAREIFDEMPQRNVVA-WTSMISG 158
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE + P+ + + +L G+Q+H+ ++S D++V MY K G
Sbjct: 188 MQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGD 247
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FD +++ WN+ I+ G + A++ F ++ + PD ITF L+A
Sbjct: 248 LVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSA 307
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS ++ G ++ + D +VD G+ ++ A + + + ++ + +
Sbjct: 308 CSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAI 367
Query: 179 SWCSML 184
W ++L
Sbjct: 368 VWGALL 373
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
++A F+KMPE N + WN ++ GY G A F++M N V+ ++
Sbjct: 11 REARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPER------NVVSWTAMIR 64
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+ G +E+ +F+ M + + + ++ L G VD A ++ MP++ +
Sbjct: 65 GYVQEGLIEEAELLFWRMPERNVVS-----WTVMLGGLIEDGRVDEARQLFDMMPVKDVV 119
Query: 384 S 384
+
Sbjct: 120 A 120
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/635 (36%), Positives = 332/635 (52%), Gaps = 65/635 (10%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPER- 74
L + S++ KQLHA L++ + + +YS L D+ +F+ +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSPP 69
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
W + I G +++ FI + +G PD F + L +C+ L+ G +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGK---CNEVGLAKVVFDG-------------------- 171
G ++R G ++ CN L++ Y K EV K VFD
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189
Query: 172 -----IIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
++ K D VSW +++ QN E+ M + P F +SSVL A
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L G+ +H A++ + ++F+GS+L+DMY KC + D+ F +P+ + + WN+II
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309
Query: 286 GGYAHQGHADMALSSFEEM----------------------TSM-----------RCEAV 312
G G D L F++M T++ R E V
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGV 369
Query: 313 -PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PNYV + VL+ACS AG V++ K F SMT Y I PG EHYA V DLLGR G ++ AY
Sbjct: 370 KPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAY 429
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
E I +M + PT SVW LL ACRV+ EL + LF +DP + G +VLLSN+++A G
Sbjct: 430 EFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAG 489
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
RW++A +R M+D G+KK CSWI +KN++H F A D SH I L L E+M+
Sbjct: 490 RWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQME 549
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY+ DT L+DVEEE+K + HSE++A+ FG+I+ P G IR+TKNLR+C DCH+
Sbjct: 550 REGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHT 609
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A KFIS IVGRE++VRDN+RFH F DG CSC D+W
Sbjct: 610 ATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 74/134 (55%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT + + + GK++H A+++G DVF+G S DMY+K DD+
Sbjct: 232 LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC 291
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +P+ + +WN+ I+ V G + F + +P+ ++F + + AC+ +
Sbjct: 292 RVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 351
Query: 126 LLQLGRQLHGFLVR 139
L LG+QLHG+++R
Sbjct: 352 TLHLGKQLHGYIIR 365
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 346/618 (55%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + + T+ A + L GKQLHA ++S D +V + ++Y+K G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F+ + +RN +W I ++ +++ F +R D ++
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF----------- 169
C + L LGRQLH ++SG + + V N L+ Y KC ++ A+ VF
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 170 --------------------DGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
DG+ +N ++W +ML Y+Q+ EE+G +M+ ++ V
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA I +LG + VKA + N+ V +A + MY KCG I +A+
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A +F++M S A P+Y++ V VLS CS +
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK--GAKPDYISYVAVLSGCSHS 618
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F MT +GI PG EH++C+VDLLGRAG + A ++I +MPM+PT VWGA
Sbjct: 619 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 678
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++LL+ +++ G+ +++ VRK M+D GI
Sbjct: 679 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 738
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V+N++H+F+A D SH + I+ L +L E++ GY V
Sbjct: 739 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGY----------VRT 788
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E +E+ HHSEK+A+AFG++++P +PI I KNLRICGDCH+ K IS + RE ++RD
Sbjct: 789 ESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRD 847
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 848 GVRFHHFKSGSCSCGDYW 865
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 228/533 (42%), Gaps = 76/533 (14%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK---------SGQIHDVFVGCSAFDM---- 54
PN FTF C+ K+ AL QL L K + D+FV C D
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 55 ------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
Y+K D A + F++M ER++ +WN I+ GR + A+
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ + R G D T+ + L AC+ L G+QLH ++RS + V + L++ Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC AK VF+ + D+N VSW ++ +Q ++F R E + F ++
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+++S C L LGR +H++ +K+ I V ++L+ +Y KCG +Q+AE F+ M ER
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435
Query: 277 NLV-------------------------------CWNAIIGGYAHQGHADMALSSFEEMT 305
++V WNA++G Y G + L + M
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
S + + P++VT V + C+ GA + G +I T+K G+ + + + G
Sbjct: 496 SQK-DVTPDWVTYVTLFRGCADIGANKLGDQII-GHTVKAGLILNVSVANAAITMYSKCG 553
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA----DNLFKLDPNDSGNHV 421
+ A ++ + + +S W A++ Y + +G+ AA D L K D ++V
Sbjct: 554 RISEAQKLFDLLNGKDVVS-WNAMITG---YSQHGMGKQAAKTFDDMLSKGAKPDYISYV 609
Query: 422 LLSNMFAATGRWEEADLVRKEMKDV-GIKKGA---GCSWISVKNRIHIFQAKD 470
+ + + +G +E L M V GI G C + H+ +AKD
Sbjct: 610 AVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 183/408 (44%), Gaps = 44/408 (10%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA+++FD MP R++A+WN +S R + ++ F+++ R+G P+ T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV----------- 162
FC + +C +L QL G + F G+ V LVD + +C V
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 163 ------------GLAKV--------VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G AK+ F+ + +++ VSW M+ Q+ + +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R+GV +S L+ACAR+ L G+ +HA +++ + + +V SAL+++Y KCGS
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A+ FN + +RN V W +IGG + S E MR E + + L +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQY---ECFSKSVELFNQMRAELMAIDQFALATL 377
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S C + G ++ +S+ LK G ++ L + G + A + M R
Sbjct: 378 ISGCFNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+S W +++ A ++G I F D D+ N + + M A
Sbjct: 437 IVS-WTSMITA-----YSQIGNIIKAREF-FDGMDTRNAITWNAMLGA 477
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 42/330 (12%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+A C L R+L ++ + NV N +++ Y K + A+ +FD + ++
Sbjct: 45 LLHAYFSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSVH 235
SW +++ Y Q +G + F++ R G P F V+ +C + EL +
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ K G+ V +ALVDM+ +CG + A F+++ + C N+++ GYA D
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ FE+M A + V+ +++A S++G V + + + M K G++ + Y
Sbjct: 222 HAIEYFEDM------AERDVVSWNMMIAALSQSGRVREALGLVVEMHRK-GVRLDSTTYT 274
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+ R + WG L+A + P++ A L +L
Sbjct: 275 SSLTACARLFSLG-----------------WGKQLHAKVIRSLPQIDPYVASALIEL--- 314
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
+A G ++EA V ++D
Sbjct: 315 -----------YAKCGSFKEAKRVFNSLQD 333
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 15/246 (6%)
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ F+ +++L A L R + +K E N+ + +++ Y K GS+ DA
Sbjct: 34 GLASAVFLQNTLLHAYFSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDA 90
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR--CEAVPNYVTLVCVLSA 324
E F++MP R++ WN ++ GY A L E SM +++PN T CV+ +
Sbjct: 91 EELFDRMPRRDVASWNTLMSGYF---QARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKS 147
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C G E ++ + K+ + +VD+ R G VD A + ++ RPTI
Sbjct: 148 CGALGCRELAPQLL-GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE-RPTIF 205
Query: 385 VWGALLNA-CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
++L ++YG A + + D + ++ + +GR EA + EM
Sbjct: 206 CRNSMLAGYAKLYGIDH----AIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261
Query: 444 KDVGIK 449
G++
Sbjct: 262 HRKGVR 267
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 321/545 (58%), Gaps = 13/545 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + Y + G +A +FDEMP+RN+ +W A IS G A F
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF---- 228
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E + +++ A L ++ +L + + V+ CN ++ +G+ V
Sbjct: 229 EVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP----EHPVAACNAMMVGFGQRGMVD 284
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
AK VF+ + +++D +W +M+ Y QN F GV P + S+L+ CA
Sbjct: 285 AAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A L+ GR VHA ++ + ++F SAL+ MY KCG++ A+ F+ +++V WN+
Sbjct: 345 ALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNS 404
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
+I GYA G + AL F +M R + P+ +T + L+ACS G V++G +IF SMT
Sbjct: 405 MITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ I+PGAEHY+C+VDLLGR+GLV+ A+++IK MP+ P +WGAL+ ACR++ E+
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
AA L +L+P ++G +VLLS+++ + GRWE+A +RK + + K GCSWI R
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 463 IHIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
+H+F + D +H + I +L KL + +GY D +F L+D++EE+K + +HSE+
Sbjct: 582 VHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSER 641
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
A+A+GL+ IP G+PIR+ KNLR+CGDCHSA K I+ I RE+I+RD NRFH F DG+CS
Sbjct: 642 QAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCS 701
Query: 582 CSDYW 586
C DYW
Sbjct: 702 CRDYW 706
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 147/343 (42%), Gaps = 51/343 (14%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + GL DA ++F +MPERN ++ + + GR A F + + D++ +
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAW 177
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A L+ + R L + + NV ++ Y + EV LA+ +F+ + +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N+VSW +MLV Y+Q E+ ++F + M ++AC
Sbjct: 234 RNEVSWTAMLVGYIQAGHVEDAAELF-----------NAMPEHPVAAC------------ 270
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+A++ +G+ G + A+ F KM ER+ W+A+I Y
Sbjct: 271 ----------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFL 314
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
ALS+F EM PNY +++ +L+ C+ ++ G ++ +M L+
Sbjct: 315 MEALSTFREMLWRGVR--PNYPSVISILTVCAALAVLDYGREVHAAM-LRCSFDMDVFAV 371
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++ + + G +D+A + + I +W +++ +G
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG 413
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + +AL + G+++HA L+ DVF + MY K G D A
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F +++ WN+ I+ G + A+ F ++R G PD IT+ L ACS
Sbjct: 389 RVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 126 LLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKNDVSW 180
++ GR++ + V S + +VD G+ GL + FD I ++ + V W
Sbjct: 449 KVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRS---GLVEEAFDLIKNMPVEPDAVIW 505
Query: 181 CSML 184
+++
Sbjct: 506 GALM 509
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT----- 305
+A + + G+I+ A AF MP R +NA++ GY D AL F M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 306 ---------SMRCEAVPN-------------YVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
S+R + +P+ V+ +L R G + +++F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+ + Y ++ L AG V+ A + EMP R ++ W A+L+ G + GR
Sbjct: 141 RNHVS-----YTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLS-----GYCQAGR 189
Query: 404 IA-ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
I A LF P N V + M + + E +L RK
Sbjct: 190 ITEARALFDEMPKR--NVVSWTAMISGYAQNGEVNLARK 226
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 346/618 (55%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ + + T+ A + L GKQLHA ++S D +V + ++Y+K G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F+ + +RN +W I ++ +++ F +R D ++
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF----------- 169
C + L LGRQLH ++SG + + V N L+ Y KC ++ A+ VF
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 170 --------------------DGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
DG+ +N ++W +ML Y+Q+ EE+G +M+ ++ V
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA I +LG + VKA + N+ V +A + MY KCG I +A+
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A +F++M S A P+Y++ V VLS CS +
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK--GAKPDYISYVAVLSGCSHS 618
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F MT +GI PG EH++C+VDLLGRAG + A ++I +MPM+PT VWGA
Sbjct: 619 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 678
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++LL+ +++ G+ +++ VRK M+D GI
Sbjct: 679 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 738
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V+N++H+F+A D SH + I+ + +L E++ GY V
Sbjct: 739 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY----------VRT 788
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E +E+ HHSEK+A+AFG++++P +PI I KNLRICGDCH+ K IS + RE ++RD
Sbjct: 789 ESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRD 847
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 848 GVRFHHFKSGSCSCGDYW 865
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 37/373 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK---------SGQIHDVFVGCSAFDM---- 54
PN FTF C+ K+ AL QL L K + D+FV C D
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 55 ------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
Y+K D A + F++M ER++ +WN I+ GR + A+
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ + R G D T+ + L AC+ L G+QLH ++RS + V + L++ Y
Sbjct: 256 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 315
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC AK VF+ + D+N VSW ++ +Q ++F R E + F ++
Sbjct: 316 AKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+++S C L LGR +H++ +K+ I V ++L+ +Y KCG +Q+AE F+ M ER
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W ++I Y+ G+ A F+ M A N +T +L A + GA E G+K
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGM------ATRNAITWNAMLGAYIQHGAEEDGLK 489
Query: 337 IFYSMTLKYGIKP 349
++ +M + + P
Sbjct: 490 MYSAMLSQKDVTP 502
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA+++FD MP R++A+WN +S R + ++ F+++ R+G P+ T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV----------- 162
FC + +C +L QL G + F G+ V LVD + +C V
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 163 ------------GLAKV--------VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
G AK+ F+ + +++ VSW M+ Q+ + +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
R+GV +S L+ACAR+ L G+ +HA +++ + + +V SAL+++Y KCGS
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A+ FN + +RN V W +IGG + S E MR E + + L +
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQY---ECFSKSVELFNQMRAELMAIDQFALATL 377
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S C + G ++ +S+ LK G ++ L + G + A + M R
Sbjct: 378 ISGCFNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436
Query: 382 TISVWGALLNA 392
+S W +++ A
Sbjct: 437 IVS-WTSMITA 446
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 42/330 (12%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+A C L R+L ++ + NV N +++ Y K + A+ +FD + ++
Sbjct: 45 LLHAYLSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSVH 235
SW +++ Y Q +G + F++ R G P F V+ +C + EL +
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ K G+ V +ALVDM+ +CG + A F+++ + C N+++ GYA D
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ FE+M A + V+ +++A S++G V + + + M K G++ + Y
Sbjct: 222 HAIEYFEDM------AERDVVSWNMMIAALSQSGRVREALGLVVEMHRK-GVRLDSTTYT 274
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+ R + WG L+A + P++ A L +L
Sbjct: 275 SSLTACARLFSLG-----------------WGKQLHAKVIRSLPQIDPYVASALIEL--- 314
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
+A G ++EA V ++D
Sbjct: 315 -----------YAKCGSFKEAKRVFNSLQD 333
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 15/246 (6%)
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G+ F+ +++L A L R + +K E N+ + +++ Y K GS+ DA
Sbjct: 34 GLASAVFLQNTLLHAYLSCGALSDARRLLRADIK---EPNVITHNIMMNGYAKQGSLSDA 90
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR--CEAVPNYVTLVCVLSA 324
E F++MP R++ WN ++ GY A L E SM +++PN T CV+ +
Sbjct: 91 EELFDRMPRRDVASWNTLMSGYF---QARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKS 147
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C G E ++ + K+ + +VD+ R G VD A + ++ RPTI
Sbjct: 148 CGALGCRELAPQLL-GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE-RPTIF 205
Query: 385 VWGALLNA-CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
++L ++YG A + + D + ++ + +GR EA + EM
Sbjct: 206 CRNSMLAGYAKLYGIDH----AIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261
Query: 444 KDVGIK 449
G++
Sbjct: 262 HRKGVR 267
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 326/568 (57%), Gaps = 3/568 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+ P+DFTF + KA LH G+QLH L++ +G D VG YSK
Sbjct: 235 MRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDR 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ +F+EMPE + ++N IS+ + + +++ F ++ G + F L+
Sbjct: 295 VLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSI 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
++ S LQ+GRQ+H + + D + V N LVD Y KC A+++F + ++ VSW
Sbjct: 355 AANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ YVQ G ++F R + ++VL A A A L LG+ +HA ++
Sbjct: 415 TALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIR 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N+F GS LVDMY KCGSI+DA F +MP+RN V WNA+I YA G + A+ +
Sbjct: 475 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGA 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ V+++ VL ACS G VE+G + F +M+ YGI P +HYAC++DL
Sbjct: 535 FTKMIQSGLQ--PDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDL 592
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP-NDSGN 419
LGR G A +++ EMP P +W ++LNACR+Y L AA+ LF ++ D+
Sbjct: 593 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAA 652
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+V +SN++AA G+WE V+K M++ GIKK SW+ V ++IH+F + D +H EI
Sbjct: 653 YVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 712
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ +L E++ GY PDT+ + D++E+ K+ + +HSE++A+AF LI+ P G PI +
Sbjct: 713 VKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVV 772
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVR 567
KNLR C DCH+A K IS IV R + +
Sbjct: 773 MKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 198/395 (50%), Gaps = 8/395 (2%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVG-CSAF-DMYSK 57
M R C P+ TF L + A+ G Q+HA A+K G ++F+ C+ Y +
Sbjct: 132 MCRSCTLPDYVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNVLLKSYCE 190
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
D A +F+E+ +++ T+N I+ G AI F+ +R++G +P TF
Sbjct: 191 VRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGV 250
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L A LG+QLHG V +GF + SV N ++ FY K + V + +F+ + + +
Sbjct: 251 LKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDF 310
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VS+ ++ Y Q + E +F + G + ++F +++LS A ++ L++GR VH
Sbjct: 311 VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQ 370
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+ A + + VG++LVDMY KC +AE+ F + +R+ V W A+I GY +G
Sbjct: 371 AIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG 430
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F +M A + T VL A + ++ G K ++ ++ G + +
Sbjct: 431 LKLFTKMRGANLRA--DQSTFATVLKASAGFASLLLG-KQLHAFIIRSGNLENVFSGSGL 487
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
VD+ + G + A ++ +EMP R +S W AL++A
Sbjct: 488 VDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISA 521
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G A +FD MP+R + TW + A F + R+ PD +TF
Sbjct: 85 YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGN--VSVCNGLVDFYGKCNEVGLAKVVFDGI 172
L C+D Q+H F V+ GFD N ++VCN L+ Y + + LA V+F+ I
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI 204
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+DK+ V++ +++ Y ++ +FL R+ G +P DF S VL A + LG+
Sbjct: 205 LDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQ 264
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H ++V + VG+ ++ Y K + + FN+MPE + V +N +I Y+
Sbjct: 265 QLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAE 324
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ +L+ F EM M + +LS + +++ G ++ +
Sbjct: 325 QYEESLNLFREMQCMGFDR--RNFPFATMLSIAANLSSLQVGRQVHCQAIV--ATADSIL 380
Query: 353 HYA-CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
H +VD+ + + D A I K + R T+S W AL++
Sbjct: 381 HVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS-WTALIS 419
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N N ++ Y K ++ A+ +FD + D+ V+W ++ Y N + ++F
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF--VGSALVDMYGKCGS 262
R P +++L C VHA AVK + N+F V + L+ Y +
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ A + F ++ +++ V +N +I GY G A+ F +M
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKM 235
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N + ++ Y K G + A F+ MP+R +V W ++G YA H D A F +M
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 306 SMRCEAVPNYVTLVCVLSACSRA 328
R +P+YVT +L C+ A
Sbjct: 134 --RSCTLPDYVTFTTLLPGCNDA 154
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 330/563 (58%), Gaps = 7/563 (1%)
Query: 30 KQLHALALKSG-QIHDVFVGCS-AFDMYSKTGLK--DDADKMFDEMPER-NLATWNAYIS 84
+Q+HA ++++G I D +G F + S A K+F ++ + N+ WN I
Sbjct: 34 RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 85 NAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G +A+ + +R +G EPD T+ L A + ++LG +H ++RSGF
Sbjct: 94 GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ V N L+ Y C +V A VFD + +K+ V+W S++ + +N + E ++
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+G++P F I S+LSACA+I L LG+ H +K + N+ + L+D+Y +CG +
Sbjct: 214 DLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
++A+ F++M ++N V W ++I G A G A+ F+ M S + +P +T V +L
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMES-KEGLLPCEITFVGILY 332
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS G V++G + F M+ +Y I+P EH+ C+VDLL RAG V +AYE I +MPM+P +
Sbjct: 333 ACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNV 392
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W LL AC V+G +L +A + +L+PN SG++VLLSNM+A+ RW + +RK+M
Sbjct: 393 VIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
G++K G S + V NR+H F D SH +N I A L ++ + ++ GY+P +
Sbjct: 453 LRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVY 512
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
DVEEEEK + +HSEKIA+AF LI+ P PIR+ KNL++C DCH A K +S + RE
Sbjct: 513 VDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNRE 572
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
++VRD +RFH F +G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 3/331 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T+P L KA + G+ +H++ ++SG ++V S +Y+ G A
Sbjct: 117 VEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD+MPE++L WN+ I+ G+P+ A+ + + G +PD T + L+AC+
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG 236
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG++ H ++++ G N+ N L+D Y +C V AK +FD ++DKN VSW S++V
Sbjct: 237 ALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 186 VYVQNYEEENGCQMFLTAR-REGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACV 243
N + ++F +EG+ P + +L AC+ ++ G ++ + +
Sbjct: 297 GLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKI 356
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
E I +VD+ + G ++ A KMP + N+V W ++G G +D+A +
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARM 416
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++ + +YV L + ++ R V+K
Sbjct: 417 KILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 328/558 (58%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+HA + + VF+G MY + G DDA + D MPER++ +W IS
Sbjct: 29 GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R A+D FI + R G P+ T L +CS + G+Q+H LV++ F+ ++ V
Sbjct: 89 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 148
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D Y K + A+ VFD + +++ VS +++ Y Q +E +F EG+
Sbjct: 149 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 208
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +++++A + +A L+ G+ VHA+ ++ + + + ++L+DMY KCG + +
Sbjct: 209 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 268
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M ER++V WNA++ GY G +S F+++ E P+ VTL+ VLS CS
Sbjct: 269 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK---EVKPDSVTLLAVLSGCSHG 325
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G+ IF ++ + HY C++DLLGR+G +++A +I+ MP T S+WG+
Sbjct: 326 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 385
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACRV+ +G + A L +++P ++GN+V+LSN++AA G W++ VRK M + +
Sbjct: 386 LLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 445
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K G SWI + IH F + + H +I A + ++ ++KAAG++PD + L+DV++
Sbjct: 446 TKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDD 505
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E+K + HSEK+A+ FGL+ PPG+ IR+ KNLRIC DCH+ KF+S + RE+ +RD
Sbjct: 506 EQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRD 565
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH G C+C DYW
Sbjct: 566 KNRFHLLTHGNCTCGDYW 583
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 14/350 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R CI PN++T + + S GKQ+H+L +K+ +FVG S DMY+K+
Sbjct: 103 LRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 161
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++FD +PER++ + A IS G + A+D F L G + + +TF + A
Sbjct: 162 IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S + L G+Q+H ++R V++ N L+D Y KC ++ ++ VFD +++++ VSW
Sbjct: 222 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 281
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML+ Y ++ +F +E V+P + +VLS C+ ++ G + VK
Sbjct: 282 NAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 340
Query: 241 ACVEGNIFVGSA----LVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
E + + + ++D+ G+ G ++ A MP E W +++G A + HA+
Sbjct: 341 ---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG--ACRVHAN 395
Query: 296 MALSSF--EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+ + +++ M E NYV L + +A V K K+ T+
Sbjct: 396 VHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 445
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 12/298 (4%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
A + AC + L GRQ+H ++ + + V + LV Y +C + A+ V D + ++
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VSW +M+ Y Q +F+ R G P ++ +++VL++C+ + G+ VH
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ VK E ++FVGS+L+DMY K +IQ+A F+ +PER++V AII GYA +G +
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 296 MALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL F ++ S M+C N+VT +++A S +++ G ++ +++ L+ +
Sbjct: 195 EALDLFRQLYSEGMQC----NHVTFTTLVTALSGLASLDYGKQV-HALILRKELPFFVAL 249
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
++D+ + G + + + M R +S W A+L YG+ LG +LFK
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVS-WNAMLMG---YGRHGLGH-EVISLFK 302
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/636 (36%), Positives = 350/636 (55%), Gaps = 55/636 (8%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M+ + + PN FT + K+ SS ++ GK +H L++G D + S D Y K
Sbjct: 378 MQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCR 437
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL---------------RR 104
A+K+F M E++ +WN +S+ + G + ++D F L R
Sbjct: 438 CFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMR 497
Query: 105 TGGEP----------------DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G E + +TF L S S+L LG+Q+H +++ G + V
Sbjct: 498 NGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFV 557
Query: 149 CNGLVDFYGKCNEVGLAKVVF-----------------DGIIDKNDVSWCSMLVVYVQNY 191
N L+D Y KC E+ A V+F D +++ VSW SM+ YVQN
Sbjct: 558 RNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVE--SVSWSSMVSGYVQNG 615
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E+ + F VE F ++SV+SACA LELGR VH K ++F+GS
Sbjct: 616 RFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGS 675
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
+++DMY KCGS+ DA + FN+ +RN+V W ++I G A G A+ FE M + E
Sbjct: 676 SIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMIN---EG 732
Query: 312 V-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+ PN V+ V VL+ACS AG +E+G K F M YGI+PGAEH+ C+VDL GRAG ++
Sbjct: 733 ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEI 792
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
E I + SVW + L++CRV+ E+G L +L+P D+G ++L S++ A
Sbjct: 793 KEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATE 852
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
RWEEA +R M+ G+KK SWI +KN++H F D SH ++T+I + L +L +
Sbjct: 853 HRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRL 912
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
K GY D + DVE+E++ +G+HSEK+A+A+G+I+ PG PIR+ KNLR+C DCH
Sbjct: 913 KEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCH 972
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ K+ S ++GRE+I+RD +RFH F G+CSC+DYW
Sbjct: 973 NFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 238/504 (47%), Gaps = 70/504 (13%)
Query: 7 SPNDFTFPCLFKASS----ALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
S + + +P L SS +++ P + LHA +K+G + G ++Y+K+ +
Sbjct: 282 SLSSYFYPPLXYFSSTFSDSMNYP-NSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLE 338
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC- 121
A KMF+E+P+ ++ +W IS G + + F ++ G P+ T L +C
Sbjct: 339 QAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S+ + ++G+ +HG+++R+G D + + N ++D+Y KC G A+ +F + +K+ VSW
Sbjct: 399 SNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWN 458
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL-SACARIA-------------- 226
M+ Y+Q + + +F + + MI ++ + C R+A
Sbjct: 459 IMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAF 518
Query: 227 ----------------GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
L LG+ +H +K V + FV ++L+DMY KCG ++ A + F
Sbjct: 519 NKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIF 578
Query: 271 NKMPERN---------------LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
+P+ + V W++++ GY G + AL +F M + E +
Sbjct: 579 KHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEV--DK 636
Query: 316 VTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
TL V+SAC+ AG +E G ++ Y + +G+ + ++D+ + G ++ A+ I
Sbjct: 637 FTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG--SSIIDMYVKCGSLNDAWLIF 694
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND--SGNHVLLSNMFAA--- 429
+ R + +W ++++ C ++G+ GR A LF+L N+ + N V + A
Sbjct: 695 NQAKDRNVV-LWTSMISGCALHGQ---GREAV-RLFELMINEGITPNEVSFVGVLTACSH 749
Query: 430 TGRWEEADLVRKEMKDV-GIKKGA 452
G EE + M++V GI+ GA
Sbjct: 750 AGLLEEGCKYFRLMREVYGIRPGA 773
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/543 (37%), Positives = 320/543 (58%), Gaps = 11/543 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + + G D+A ++FDEM ERN+ TW I+ G +D L
Sbjct: 171 DVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMIT----GYGQNKRVDVARKLF 226
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
E +++ + L + ++ + + V CN ++ G+ E+
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP----VIACNAMIVALGEVGEIV 282
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+ VFD + D+++ +W M+ Y + E ++F +R+GV P + S+LS CA
Sbjct: 283 KARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCA 342
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A L+ GR VHA V+ +G+++V S L+ MY KCG + A++ F++ P ++++ WN+
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNS 402
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
II GYA G + AL F EM +PN VTL+ +L+ACS G +E+G++IF SM
Sbjct: 403 IISGYASHGLGEEALKVFHEMP--LSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMES 460
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
K+ + P EHY+C VD+LGRAG VD+A E+I M ++P +VWGALL AC+ + + +L
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
+AA LF+++P ++G ++LLS++ A+ +W + +RK M+ + K GCSWI V ++
Sbjct: 521 VAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKV 580
Query: 464 HIF-QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
H+F + +H I ML K ++ AGY PD + L+DV+EEEK+ + HSE++
Sbjct: 581 HMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERL 640
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
A+A+GL+ +P GVPIR+ KNLR+CGDCH+A K IS + RE+I+RD NRFH F +G CSC
Sbjct: 641 AVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSC 700
Query: 583 SDY 585
DY
Sbjct: 701 RDY 703
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 157/393 (39%), Gaps = 41/393 (10%)
Query: 56 SKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFC 115
S+ G ++A K FD + + + +WN+ +S G P+ A F + E +++++
Sbjct: 28 SRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM----PERNIVSWN 83
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
++ +++ R + + + NV +V Y + V A+++F + ++
Sbjct: 84 GLVSGYIKNRMIEEARNVFEIMP----ERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER 139
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI-SSVLSACARIAGL-ELGRS 233
N+VSW M + ++ +++ D M V+++ I GL GR
Sbjct: 140 NEVSWTVMFGGLIDGGRIDDARKLY-----------DMMPGKDVVASTNMIGGLCREGRV 188
Query: 234 VHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
A + E N+ + ++ YG+ + A F MPE+ V W +++ GY G
Sbjct: 189 DEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSG 248
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVC--VLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ A FE M P + C ++ A G + K ++F M +
Sbjct: 249 RIEDAEEFFEVM--------PMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNAT-- 298
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAAD 407
+ ++ R G A E+ +M +RP+ ++L+ C + GR
Sbjct: 299 ---WRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 408 NLFKLD-PNDSGNHVLLSNMFAATGRWEEADLV 439
+L + D +L M+ G +A LV
Sbjct: 356 HLVRCQFDGDVYVASVLMTMYVKCGELVKAKLV 388
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+R+ + P+ + + + L G+Q+HA ++ DV+V MY K G
Sbjct: 322 MQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGE 381
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD P +++ WN+ IS G + A+ F + +G P+ +T A L A
Sbjct: 382 LVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTA 441
Query: 121 CSDCSLLQLGRQLHGFLVRSGF--DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CS L+ G ++ + S F V + VD G+ +V A + + + K D
Sbjct: 442 CSYGGKLEEGLEIFESM-ESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDA 500
Query: 179 S-WCSML 184
+ W ++L
Sbjct: 501 TVWGALL 507
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 329/551 (59%), Gaps = 12/551 (2%)
Query: 41 QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFI 100
+ DV + Y + G ++ ++F+EMP R++ +W + I L G+ + A+ F
Sbjct: 132 HVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFK 191
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG--FDGNVSVCNGLVDFYGK 158
+ R+G EP TF L+AC++ LG Q+HG +V+ G F +SV L+ FY
Sbjct: 192 KMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISV--SLITFYAN 249
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
C ++ A +F+ + KN V W ++L YV N + ++ ++F + G P S
Sbjct: 250 CMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSIT 309
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L AC + L+ G+ +H +A+K +E ++FVG++LV MY +CG++ A F + E+++
Sbjct: 310 LKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDI 369
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WN+II G A G AL F +M +R PN +T +LSACSR+G + KG + F
Sbjct: 370 VSWNSIIVGSAQHGFGLWALIFFNQM--IRRGVDPNEITFTGLLSACSRSGMLLKG-RCF 426
Query: 339 YSMTLKYG---IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+ +Y ++P +HYAC+VD+LGR G +D A E+++ MP++ +W ALL+ACRV
Sbjct: 427 FEYISRYKSNVLRP--QHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRV 484
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ E+ AA ++ L+PN S +VLLSN++A+ GRW + +R +MK G+ K G S
Sbjct: 485 HSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSS 544
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
W+ ++ + H F + D SH + I L L +++K GY+PD FAL+DVE+E+K +
Sbjct: 545 WVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEML 604
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSE++A+AFGL++ G I + KNLR+CGDCHS K +S IVGR+++VRD+ RFH F
Sbjct: 605 SFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHF 664
Query: 576 WDGYCSCSDYW 586
+G CSCSDYW
Sbjct: 665 KNGICSCSDYW 675
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 6/337 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P TF C+ A + G Q+H +K G F+ S Y+
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A K+F+E +N+ W A ++ V + ++A+ F ++ + G P+ TF L A
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L G+++H ++ G + +V V N LV Y +C V A VF I +K+ VSW
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW 372
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++V Q+ F R GV+P + + +LSAC+R L GR +
Sbjct: 373 NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR 432
Query: 241 ACVEGNIFVG---SALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADM 296
+ N+ + +VD+ G+CG + +AE MP + N + W A++ + ++
Sbjct: 433 --YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEV 490
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
A + + + + YV L + ++ R V +
Sbjct: 491 AERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSR 527
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 166/373 (44%), Gaps = 16/373 (4%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ DA K+FD M R++ +WN+ I + G A F + E ++I++
Sbjct: 53 YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEM----PEKNVISW 108
Query: 115 CAFLNACSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+N L+ GR +L L +V+ N +V Y + V +F+ +
Sbjct: 109 TTMVNG-----YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMP 163
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ +SW SM+ N + E +F R GVEP + VLSACA LG
Sbjct: 164 VRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQ 223
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH VK + F+ +L+ Y C I+ A FN+ +N+V W A++ Y
Sbjct: 224 VHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNK 283
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL F +MT M A+PN T L AC A++KG +I ++M +K G++
Sbjct: 284 HQDALRVFGDMTKM--GALPNQSTFSITLKACCGLEALDKGKEI-HTMAIKLGLETDVFV 340
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK-- 411
+V + G V+ A + + + + +S W +++ +G I + + +
Sbjct: 341 GNSLVVMYTECGNVNSAVAVFRNINEKDIVS-WNSIIVGSAQHGFGLWALIFFNQMIRRG 399
Query: 412 LDPNDSGNHVLLS 424
+DPN+ LLS
Sbjct: 400 VDPNEITFTGLLS 412
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + + ++ Y + + DA F++M R++V WN++I G G+ MA F+EM
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
N ++ +++ + G VE ++F M +K + +V G
Sbjct: 102 E------KNVISWTTMVNGYLKFGRVELAQRLFLDMHVK-----DVAAWNAMVHGYFENG 150
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
V+ + +EMP+R IS W +++ + GK E
Sbjct: 151 RVEEGVRLFEEMPVRDVIS-WTSMIGGLDLNGKSE 184
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 333/564 (59%), Gaps = 7/564 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR P++FT + ++L + G+Q+H LK G DV V + +Y++TG
Sbjct: 479 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 538
Query: 61 KDDADKMFDEMPERNLATWNAYI-SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ K+F MPE + +WN+ I + + A+ F+ + R G +TF L+
Sbjct: 539 FTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILS 598
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID-KNDV 178
A S SL ++ Q+H +++ + ++ N L+ YGKC E+ + +F + + +++V
Sbjct: 599 AVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEV 658
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW SM+ Y+ N + ++G F +++LSACA +A LE G VHA
Sbjct: 659 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACG 718
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++AC+E ++ VGSALVDMY KCG I A F MP RN+ WN++I GYA GH + AL
Sbjct: 719 IRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKAL 778
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F M M P++VT V VLSACS G VE+G + F SM+ Y + P EH++C+V
Sbjct: 779 KLFTRM--MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 836
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC-RVYGK-PELGRIAADNLFKLDPND 416
DLLGRAG +D + I MPM+P + +W +L AC R G+ ELGR AA+ L +L+P +
Sbjct: 837 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 896
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+ N+VLL+NM+A+ +WE+ R MK+ +KK AGCSW+++K+ +H+F A D H
Sbjct: 897 AVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 956
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
I L +L +M+ AGYIP T +AL+D+E E K + +HSEKIA+AF ++ +P
Sbjct: 957 DLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALP 1015
Query: 537 IRITKNLRICGDCHSAFKFISGIV 560
IRI KNLR+CGDCHSAF +IS I+
Sbjct: 1016 IRIMKNLRVCGDCHSAFGYISKII 1039
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 22/413 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
++LH ++K G + ++F+ + ++Y + G A K+FDEM RNL TW IS
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC--SLLQLGRQLHGFLVRSGFDGNV 146
G+P A F ++ R G P+ F + L AC + S +LG Q+HG + ++ + +V
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 147 SVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
VCN L+ YG C + A+ VFDGI +N +SW S++ VY + + + +F + ++
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 206 EGV----EPKDFMISSVL-SACARIA-GLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
EG+ +P ++ S++ +AC+ + GL + + A K+ +++V SALV + +
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G DA+ F +M RN+V N ++ G Q + A F EM + +YV L
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL- 388
Query: 320 CVLSACSRAGAVEKGMKI---FYSMTLKYGIKPGAEHYAC-VVDLLGRAGLVDRAYEIIK 375
LSA S +E+G + ++ ++ G+ +V++ ++G + A + +
Sbjct: 389 --LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 446
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS--GNHVLLSNM 426
M + ++S W +L++ + E AA++ ++ S N L+S +
Sbjct: 447 LMVEKDSVS-WNSLISGL---DQNECSEDAAESFHRMRRTGSMPSNFTLISTL 495
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 199/392 (50%), Gaps = 12/392 (3%)
Query: 8 PNDFTFPCLFK-ASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
PN++TF L A S++ + +Q+ A KSG + D++V + +++ GL DDA
Sbjct: 278 PNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAK 337
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++M RN+ + N + V + + A F ++ G + ++ L+A S+ S
Sbjct: 338 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG-INSDSYVVLLSAFSEFS 396
Query: 126 LLQ----LGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+L+ GR++H ++R+G + N V++ NGLV+ Y K + A VF+ +++K+ VSW
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ QN E+ + F RR G P +F + S LS+CA + + LG +H +K
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 516
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA-HQGHADMALS 299
++ ++ V +AL+ +Y + G + F+ MPE + V WN++IG + + A+
Sbjct: 517 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 576
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M MR + VT + +LSA S E +I +++ LKY + ++
Sbjct: 577 YFLQM--MRGGWGLSRVTFINILSAVSSLSLHEVSHQI-HALVLKYCLSDDTAIGNALLS 633
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G+ G ++ +I M W ++++
Sbjct: 634 CYGKCGEMNECEKIFARMSETRDEVSWNSMIS 665
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 172/364 (47%), Gaps = 25/364 (6%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
TF + +N + R+LH ++ GF GN+ + N L++ Y + ++G A+ +FD +
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI--AGLEL 230
++N V+W ++ Y QN + + C F R G P + S L AC +G +L
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G +H + K ++ V + L+ MYG C S DA F+ + RN + WN+II Y+
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252
Query: 290 HQGHADMALSSFEEMTSMRCEAV-----PNYVTL-VCVLSACSRAGAVEKGMKIFYSMTL 343
+G A+S+++ +SM+ E + PN T + +ACS +V+ G+ + M
Sbjct: 253 RRGD---AVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACS---SVDFGLCVLEQMLA 306
Query: 344 ---KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
K G + +V R GL D A I ++M +R +S+ G ++ K +
Sbjct: 307 RVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLV----KQK 362
Query: 401 LGRIAADNLFKLDP---NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
G AA ++ +S ++V+L + F+ EE +E+ I+ G + +
Sbjct: 363 QGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 422
Query: 458 SVKN 461
++ N
Sbjct: 423 AIGN 426
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/589 (37%), Positives = 336/589 (57%), Gaps = 9/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ T + A L G+ +H +KS D+ + S MYS G
Sbjct: 290 MRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+ +F M +++ +W A I++ V P A++ + + G PD IT + L+A
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L LG +LH +++G +V V N L+D Y KC V A VF I KN VSW
Sbjct: 410 CACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469
Query: 181 CSMLV-VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
S+++ + + N E +F +E ++P + SVLSACARI L G+ +HA A+
Sbjct: 470 TSLILGLRINNRSFE--ALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ V + F+ +A++DMY +CG A FN ++++ WN ++ GYA QG A +A+
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVE 586
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M + E P+ +T + +L ACS++G V +G++ F M KY + P +HYACVVD
Sbjct: 587 LFDKM--LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVD 644
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGRAG +D AY+ I++MP+RP ++WGALLNACR++ ELG IAA +F+ D G
Sbjct: 645 ILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGY 704
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LL N++A G W++ VR M++ G+ GCSW+ +K ++H F + D SH ++ EI
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEI 764
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+L +MK G+ + ++E G HSE+ A+AFGLI PG+PI +
Sbjct: 765 NGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQAIAFGLINTAPGMPIWV 823
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD--YW 586
TKNL +C CH+ KFIS IV RE+ VRD +H F DG CSC D YW
Sbjct: 824 TKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 211/410 (51%), Gaps = 10/410 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN +TFP + K + + GK++HA ++ G DV VG + MY K G +A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP+R+ +WNA IS G ++ F +R +PDLIT +AC
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LGR +HG++V+S F G++S+ N L+ Y + A+ VF + K+ VSW +M+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
V + + + EG+ P + + SVLSACA I L+LG +H +A+K +
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ V ++L+DMY KC + +A F + +N+V W ++I G + AL F +M
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493
Query: 306 -SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
SM+ PN VTL+ VLSAC+R GA+ +G +I ++ L+ G+ ++D+ R
Sbjct: 494 ESMK----PNSVTLISVLSACARIGALMRGKEI-HAHALRTGVGFDGFLPNAILDMYVRC 548
Query: 365 GLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
G R + + + ++ W LL G+ +L D + +L+
Sbjct: 549 G---RKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 190/371 (51%), Gaps = 6/371 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P G +++ L S V +G + M+ + G DA +F +M ER++ +WN +
Sbjct: 113 PDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGG 172
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G A++ + + P++ TF + L C+ S + G+++H ++R GF+ +
Sbjct: 173 YAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD 232
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V N L+ Y KC ++ A+++FD + ++ +SW +M+ Y +N G ++F R
Sbjct: 233 VDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRE 292
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
V+P +++V SAC + LGR VH VK+ G+I + ++L+ MY G +++
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSA 324
AE F++M +++V W A+I + + E M E + P+ +TLV VLSA
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSH---KLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ G ++ G+++ + + +K G+ ++D+ + VD A E+ + + + +S
Sbjct: 410 CACIGHLDLGIRL-HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 385 VWGALLNACRV 395
W +L+ R+
Sbjct: 469 -WTSLILGLRI 478
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 317/575 (55%), Gaps = 33/575 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R E + P T + +SAL G +H L+ G FVG DMY+K GL
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGL 196
Query: 61 KDDADKMFDEMP-------------------------------ERNLATWNAYISNAVLG 89
DA ++F EM +R+ TW ++
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G A+D F +R G D TF + L AC + L+ G+Q+H ++ R+ ++ NV V
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG 316
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y KC + LA+ VF + +N +SW +M+V Y QN E + F + +G++
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P DF + SV+S+CA +A LE G H +A+ + + I V +ALV +YGKCGSI+DA
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F++M + V W A++ GYA G A + FE+M + + P+ VT + VLSACSRAG
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLK--PDGVTFIGVLSACSRAG 494
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VEKG F SM +GI P +HY C++DL R+G A E IK+MP P W L
Sbjct: 495 LVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATL 554
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L++CR+ G E+G+ AA+NL + DP + ++VLL +M AA G+W E +R+ M+D +K
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVK 614
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCSWI KN++HIF A D SH ++ I L L +M GY PD + L+DV +
Sbjct: 615 KEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADA 674
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+K+ + HHSEK+A+AFGLI +P +PIRI KNLR
Sbjct: 675 DKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 194/433 (44%), Gaps = 68/433 (15%)
Query: 32 LHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS------ 84
+H L LK+ Q F+ Y+K+G A ++FDEMP+ NL T NA +S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 85 --------------------NAVL-----GGRPKNAIDAFIN-LRRTGGEPDLITFCAFL 118
NA++ G P ++ + LR P IT A +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK-------------------- 158
S S LG +H ++R GF V + LVD Y K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 159 -----------CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
C + AK +F ++D++ ++W +M+ QN + +F R EG
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + S+L+AC +A LE G+ +HA + E N+FVGSALVDMY KC SI+ AE
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M RN++ W A+I GY ++ A+ +F EM + P+ TL V+S+C+
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK--PDDFTLGSVISSCAN 391
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
++E+G + F+ + L G+ +V L G+ G ++ A+ + EM +S W
Sbjct: 392 LASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 449
Query: 388 ALLNACRVYGKPE 400
AL+ +GK +
Sbjct: 450 ALVTGYAQFGKAK 462
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 320/552 (57%), Gaps = 13/552 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D F+ + Y+ A ++FDE P +N+ WNA + L + A+ ++
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLG-----RQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
R G D ++ L AC S L R++H +R G+ + V L+D Y K
Sbjct: 343 RLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAK 402
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMIS 216
V A+ VF + D+N VSW +M+ Y +N + Q+F + A + P I
Sbjct: 403 LGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIV 462
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PE 275
SVL ACA + L G+ +HA ++ + + V +AL+ MY KCG ++ FN +
Sbjct: 463 SVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR 522
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKG 334
RN+V WN++I GY G +L FEEM E + PN +T V VL ACS G VE+G
Sbjct: 523 RNVVSWNSLISGYGMHGFGRESLQVFEEMIE---EGISPNIITFVSVLGACSHVGLVEQG 579
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
K+F SM ++Y + P AEHYAC+VDLLGRAG +D A E+I+ M ++P+ VWG+LL ACR
Sbjct: 580 KKLFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
++G E +A +LF L+P ++GN+VLL++++A + D++++ +++ ++K GC
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SWI VK +++ F + D + + E+QA++ + +MK GY+PDT LYD+EEEEK
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERI 758
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+AFGLI G IRITKNLR+C DCHS KFIS RE++VRD NRFH
Sbjct: 759 LLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHH 818
Query: 575 FWDGYCSCSDYW 586
F +G CSC DYW
Sbjct: 819 FRNGVCSCRDYW 830
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 6/306 (1%)
Query: 19 ASSALHIPVTGK--QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
A+SA H+P + + ++HA A++ G V + D Y+K G+ A+++F MP+RNL
Sbjct: 362 AASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNL 421
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSDCSLLQLGRQLH 134
+W+A I RP +AI F + + + P+ IT + L+AC+ + L G+ LH
Sbjct: 422 VSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLH 481
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSMLVVYVQNYEE 193
+++R GFD VSV N L+ Y KC + + +F+ I +N VSW S++ Y +
Sbjct: 482 AYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFG 541
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
Q+F EG+ P SVL AC+ + +E G+ + V+ V + +
Sbjct: 542 RESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACM 601
Query: 254 VDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
VD+ G+ G + +A E+ + + + W +++G GH + A + + +
Sbjct: 602 VDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNA 661
Query: 313 PNYVTL 318
NYV L
Sbjct: 662 GNYVLL 667
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T + A + ++ GK LHA L+ G V V + MY K G +
Sbjct: 454 LVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGR 513
Query: 66 KMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F+ + RN+ +WN+ IS + G + ++ F + G P++ITF + L ACS
Sbjct: 514 YIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHV 573
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G++L +V +VD G+ + A + + I + W S+
Sbjct: 574 GLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSL 633
Query: 184 L 184
L
Sbjct: 634 L 634
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/519 (40%), Positives = 311/519 (59%), Gaps = 10/519 (1%)
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F++MP +++A+WN IS G+ + A D F + G +++ A ++ + L
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNG----VSWSAMISGYVEHGDL 214
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ +L+ ++ +V V ++ Y K +V LA+ +F + KN V+W SM+ Y
Sbjct: 215 EAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V+N E+G ++F T V P +SSVL C+ ++ L LGR +H + K+ + +
Sbjct: 271 VENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
++L+ MY KCG + A F +MP ++++ WNA+I GYA G AL F++M +
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNG 390
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+++T V V+ AC+ AG V+ G++ F SM ++GI+ HY CV+DLLGRAG +
Sbjct: 391 TMK--PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D A +IKEMP P +++G LL ACR++ +L AA NL LDP + +V L+N++
Sbjct: 449 DEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIY 508
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
AAT +W++ VRK MK+ + K G SWI +K+ H F++ D H T I L +L
Sbjct: 509 AATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELD 568
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+MK AGY+PD FAL+DVEEE K + HSEK+A+AFGL+ PG PIR+ KNLR+CG
Sbjct: 569 GKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCG 628
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A KFIS I RE+IVRD RFH F +G+CSC DYW
Sbjct: 629 DCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 139/302 (46%), Gaps = 2/302 (0%)
Query: 38 KSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAID 97
K+ + V V + Y K G + A+++F M +NL TWN+ I+ V R ++ +
Sbjct: 222 KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLK 281
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
F + + P+ ++ + L CS+ S L LGRQ+H + +S + + C L+ Y
Sbjct: 282 VFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC ++ A +F + K+ ++W +M+ Y Q+ +F R ++P +
Sbjct: 342 KCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVA 401
Query: 218 VLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-E 275
V+ AC ++LG + ++ + +E + ++D+ G+ G + +A +MP
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFT 461
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+ + ++G + D+A + + ++ + YV L + +A ++ V K
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVR 521
Query: 336 KI 337
K+
Sbjct: 522 KM 523
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T +F+ AC S + ++ VR+ N ++ +G GK E A +FD I
Sbjct: 79 TIASFVRACDLESARNVFEKMS---VRTTVTWN-TMLSGYTKVAGKVKE---AHELFDKI 131
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTA---------------RREGVEPKDFMISS 217
+ + VS+ MLV Y+++Y + F + G K F + S
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 218 VL------SACARIAG------LELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQ 264
V+ S A I+G LE ++ V +K+ V V +A++ Y K G ++
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVV-----VETAMLTGYMKFGKVE 246
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
AE F +M +NLV WN++I GY A+ L F+ M R PN ++L VL
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR--PNPLSLSSVLLG 304
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS A+ G ++ + + K + ++ + + G +D A+++ EMP + I+
Sbjct: 305 CSNLSALPLGRQM-HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVIT 363
Query: 385 VWGALLNACRVYG 397
W A+++ +G
Sbjct: 364 -WNAMISGYAQHG 375
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + S L G+Q+H L KS D S MY K G D A
Sbjct: 291 VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAW 350
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F EMP +++ TWNA IS G + A+ F +R +PD ITF A + AC+
Sbjct: 351 KLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 126 LLQLGRQ 132
+ LG Q
Sbjct: 411 FVDLGVQ 417
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAH-QGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
++ A F KM R V WN ++ GY G A F+++ ++V + LVC
Sbjct: 89 LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP--EPDSVSYNIMLVCY 146
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L R+ V+ + F M +K + ++ + G + +A+++ MP +
Sbjct: 147 L----RSYGVKAALAFFNKMPVK-----DIASWNTLISGFAQNGQMQKAFDLFSVMPEKN 197
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFK 411
+S W A+++ +G E AA+ L+K
Sbjct: 198 GVS-WSAMISGYVEHGDLE----AAEELYK 222
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/594 (36%), Positives = 330/594 (55%), Gaps = 35/594 (5%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P GK+LH +K+G + + +MY K GL DA +F+++P R+ +W + ++
Sbjct: 19 PPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTA 78
Query: 86 AVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P + F + ++ G +PD F + AC+ ++ G+Q+H + S
Sbjct: 79 NNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSD 138
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF---- 200
+ V + LVD Y KC + +VVFD I KN +SW +M+ Y Q+ + + Q+F
Sbjct: 139 DDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP 198
Query: 201 ---------------------------LTARREGVEPKD-FMISSVLSACARIAGLELGR 232
+ R +G++ D F++SS++ A A +A L LG+
Sbjct: 199 VKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGK 258
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H + + E ++FV +ALVDMY KC + A+ F +M +R++V W +II G A G
Sbjct: 259 QIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHG 318
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A+ ALS + M S + PN VT V ++ ACS G V KG F SM YGI P +
Sbjct: 319 LAEEALSLYNRMLSTGLK--PNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQ 376
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C++DLL R+G ++ A +IK MP +P + W ALL+AC + +G AD+L L
Sbjct: 377 HYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSL 436
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
P D ++LLSN++A+ WE VR+ M + +KK G S I + +F A +TS
Sbjct: 437 KPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETS 496
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H EI +L +L EMK GYIPDT+ L+D+E++EK ++ HSE++A+A+GL+
Sbjct: 497 HPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGI 556
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG+ + I KNLR+CGDCH+ KFIS IV RE++VRD NR+H F DG CSC+++W
Sbjct: 557 PGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 191/405 (47%), Gaps = 41/405 (10%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+++ + P+ + F CL KA + L GKQ+HA + S D V S DMY+K GL
Sbjct: 97 KQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLP 156
Query: 62 D-------------------------------DADKMFDEMPERNLATWNAYISNAVLGG 90
D DA ++F +MP +NL +W A IS V G
Sbjct: 157 DIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSG 216
Query: 91 RPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
++ F+ +R G + D + + A ++ ++L LG+Q+H ++ G++ ++ V
Sbjct: 217 NWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVS 276
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N LVD Y KC++V AK +F ++ ++ VSW S++V Q+ E ++ G++
Sbjct: 277 NALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLK 336
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEI 268
P + ++ AC+ + + GR +K + ++ + L+D+ + G +++AE
Sbjct: 337 PNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAEN 396
Query: 269 AFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
MP + + W A++ H + + + + + S++ E Y+ L + ++ +
Sbjct: 397 LIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAM 456
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
+V K ++ +M +K +PG Y+C+V LG+ V A E
Sbjct: 457 WESVSKVRRLMAAMEVKK--EPG---YSCIV--LGKESQVFLAGE 494
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 7/228 (3%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L AC+ +G++LH ++++G D S+ N L++ YGKC + A +F+ + ++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTA-RREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S+L Q MF +++G++P ++ + ++ ACA + ++ G+ VHA
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ + V + V S+LVDMY KCG + F+ + +N + W A+I GYA G
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
A+ F++M V N ++ ++S ++G +F M K
Sbjct: 190 AIQLFQKM------PVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSK 231
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 1 MRRECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR + I D F + AS+ L + GKQ+H L + G +FV + DMY+K
Sbjct: 228 MRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCS 287
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A K+F M +R++ +W + I G + A+ + + TG +P+ +TF +
Sbjct: 288 DVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIY 347
Query: 120 ACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND- 177
ACS L+ GR +++ G + ++ L+D + + A+ + + K D
Sbjct: 348 ACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDE 407
Query: 178 VSWCSML 184
+W ++L
Sbjct: 408 ATWAALL 414
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/664 (34%), Positives = 352/664 (53%), Gaps = 80/664 (12%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTG-KQLHALALKSGQIH---------DVFVGCS 50
M+R P+ FTF + A S + T +QLH K G + +V C+
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 51 AFDMYSKTGLKDDADKMFDEMPE----------------RN-----------------LA 77
+ + + L A K+FDE P RN
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
WNA IS V G + A D + G + D T+ + ++A S+ L +GRQ+H ++
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300
Query: 138 VRSGFDGN----VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML--VVYVQNY 191
+R+ + +SV N L+ Y +C ++ A+ VFD + K+ VSW ++L V +
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRI 360
Query: 192 EE-----------------------------ENGCQMFLTARREGVEPKDFMISSVLSAC 222
EE E G ++F + EG+EP D+ + +++C
Sbjct: 361 EEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ + L+ G+ +H+ ++ + ++ VG+AL+ MY +CG ++ A+ F MP + V WN
Sbjct: 421 SVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWN 480
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
A+I A GH A+ +E+M ++ + +P+ +T + +LSACS AG V++G F +M
Sbjct: 481 AMIAALAQHGHGVQAIQLYEKM--LKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMR 538
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ YGI P +HY+ ++DLL RAG+ A + + MP P +W ALL C ++G ELG
Sbjct: 539 VCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELG 598
Query: 403 RIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNR 462
AAD L +L P G ++ LSNM+AA G+W+E VRK M++ G+KK GCSWI V+N
Sbjct: 599 IQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENM 658
Query: 463 IHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
+H+F D H + L +L EM+ GY+PDT F L+D+E E+K + HSEK+
Sbjct: 659 VHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKL 718
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
A+ +G++ +P G IR+ KNLRICGDCH+AFK+IS +V RE+IVRD RFH F +G CSC
Sbjct: 719 AVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSC 778
Query: 583 SDYW 586
S+YW
Sbjct: 779 SNYW 782
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 181/423 (42%), Gaps = 63/423 (14%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFIN 101
D+ + YS G A ++F+ P R+ ++NA I+ A+ F+
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKC- 159
++R G PD TF + L A S + + +QLH + + G SV N L+ Y C
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 160 -----------------------------------------NEVGLAKVVFDGIIDKNDV 178
+++ A+ + +G+ D V
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +M+ YV E + G++ ++ +SV+SA + +GR VHA
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300
Query: 239 VKACVEGN----IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
++ V+ + + V +AL+ +Y +CG + +A F+KMP ++LV WNAI+ G +
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRI 360
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A S F EM V + +T ++S ++ G E+G+K+F M L+ G++P Y
Sbjct: 361 EEANSIFREM------PVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLE-GLEPCDYAY 413
Query: 355 ACVVDLLGRAGLVDRAYEI---IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
A + G +D ++ I ++ ++SV AL+ G E AAD +F
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVE----AADTVFL 469
Query: 412 LDP 414
P
Sbjct: 470 TMP 472
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 131/352 (37%), Gaps = 84/352 (23%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID------- 174
+ S R +H ++ SGF + N L+D Y K + A+ +FD I
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 175 --------------------------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++ VS+ +M+ + +++ Q+F+ +R G
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 209 EPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGS----- 262
P F SSVL A + IA E + +H K V +AL+ Y C S
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186
Query: 263 ----IQDAEIAFNKMPE----------------RN-----------------LVCWNAII 285
+ A F++ P RN V WNA+I
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY H+G + A M S+ + + T V+SA S AG G ++ ++ L+
Sbjct: 247 SGYVHRGFYEEAFDLLRRMHSLGIQL--DEYTYTSVISAASNAGLFNIGRQV-HAYVLRT 303
Query: 346 GIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
++P V + L R G + A + +MP++ +S W A+L+ C
Sbjct: 304 VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVS-WNAILSGC 354
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 310/525 (59%), Gaps = 12/525 (2%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA FD MP +++A+WN IS G A F + E + +++ A ++
Sbjct: 122 DARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAM----PEKNCVSWSAMVSGYV 177
Query: 123 DCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
C L + + +RS V ++ Y K V LA+ +F + + V+W
Sbjct: 178 ACGDLDAAVECFYAAPMRS-----VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWN 232
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ YV+N E+G ++F T GV+P ++SVL C+ ++ L+LG+ VH + K
Sbjct: 233 AMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC 292
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + G++LV MY KCG ++DA F ++P +++VCWNA+I GYA G AL F
Sbjct: 293 PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLF 352
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
+EM + P+++T V VL AC+ AG V+ G++ F +M +GI+ EHYAC+VDLL
Sbjct: 353 DEMKKEGLK--PDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GRAG + A ++IK MP +P +++G LL ACR++ L AA NL +LDP + +V
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYV 470
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
L+N++AA RW+ +R+ MKD + K G SWI + + +H F++ D H I
Sbjct: 471 QLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHE 530
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L L ++MK AGY+PD F L+DV EE K + HSEK+A+AFGL+ +P GVPIR+ K
Sbjct: 531 KLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFK 590
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+CGDCHSA K+IS I GRE+IVRD RFH F DG+CSC DYW
Sbjct: 591 NLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 9/289 (3%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G + A+++F EM R L TWNA I+ V GR ++ + F + TG +P+ ++
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L CS+ S LQLG+Q+H + + + + LV Y KC ++ A +F I
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR 326
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RS 233
K+ V W +M+ Y Q+ + ++F ++EG++P +VL AC ++LG +
Sbjct: 327 KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQY 386
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQG 292
+ + +E + +VD+ G+ G + +A MP + + + ++G A +
Sbjct: 387 FNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLG--ACRI 444
Query: 293 HADMALSSF--EEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
H ++ L+ F + + + YV L V +A +R ++ + MK
Sbjct: 445 HKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMK 493
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN + + S L GKQ+H L K D G S MYSK G DA
Sbjct: 259 VKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAW 318
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F ++P +++ WNA IS G K A+ F +++ G +PD ITF A L AC+
Sbjct: 319 ELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
Query: 126 LLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA 165
L+ LG Q + R G + +VD G+ ++ A
Sbjct: 379 LVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEA 419
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 59/310 (19%)
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFL 201
+ NV N L+ Y +C ++ A VF+ + K+ V+W S+L + + E Q+F
Sbjct: 38 NNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFE 97
Query: 202 TARREGVEPKDFMIS---------------------------SVLSACARIAGL-ELGRS 233
+ + M++ +++SA A++ + E R
Sbjct: 98 KIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRL 157
Query: 234 VHAVAVKACVEGNIFVG--------------------------SALVDMYGKCGSIQDAE 267
A+ K CV + V +A++ Y K G ++ AE
Sbjct: 158 FSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAE 217
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F +M R LV WNA+I GY G A+ L F M + PN ++L VL CS
Sbjct: 218 RLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTM--LETGVKPNALSLTSVLLGCSN 275
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
A++ G ++ + + K + +V + + G + A+E+ ++P R + W
Sbjct: 276 LSALQLGKQV-HQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP-RKDVVCWN 333
Query: 388 ALLNACRVYG 397
A+++ +G
Sbjct: 334 AMISGYAQHG 343
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 11/591 (1%)
Query: 1 MRRECISPNDFT----FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS 56
M+ E I PN T P + +A + H GK LH ++ + V VG DMY+
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGH----GKALHGYCVRRSFDNGVVVGTGLLDMYA 256
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFC 115
K A K+FD M RN +W+A I V K A++ F + + +P +T
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L AC+ + L GR+LH ++++ G ++ + N L+ Y KC + A FD + K
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK 376
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VS+ +++ VQN +F + G++P + VL AC+ +A L+ G H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ + + +AL+DMY KCG I A FN+M ++V WNA+I GY G
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F ++ ++ + P+ +T +C+LS+CS +G V +G F +M+ + I P EH
Sbjct: 497 EALGLFHDLLALGLK--PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VD+LGRAGL+D A+ I+ MP P + +W ALL+ACR++ ELG + + L P
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+GN VLLSN+++A GRW++A +R KD G+KK GCSWI + +H F D SH +
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
++I L +L EMK GY + +F DVEEEEK + +HSEK+A+AFG++ + G
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGR 734
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI +TKNLR+CGDCH+A KF++ I RE+ VRD NRFH F +G C+C D+W
Sbjct: 735 PILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 7/423 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN +T+P + KA S L G ++H+ A G DVFV + D Y+K G+ +A
Sbjct: 105 VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ 164
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F M R++ WNA I+ L G +A+ + ++ G P+ T L +
Sbjct: 165 RLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAK 224
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+ LHG+ VR FD V V GL+D Y KC + A+ +FD + +N+VSW +M+
Sbjct: 225 ALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIG 284
Query: 186 VYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV + + ++F ++ ++P + SVL ACA++ L GR +H +K
Sbjct: 285 GYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXV 344
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I +G+ L+ MY KCG I DA F+ M ++ V ++AI+ G G+A +ALS F M
Sbjct: 345 LDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMM 404
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ P+ T++ VL ACS A++ G + + G ++D+ +
Sbjct: 405 QLSGID--PDLTTMLGVLPACSHLAALQHGF-CSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVY--GKPELGRIAADNLFKLDPNDSGNHVL 422
G + A E+ M R I W A++ ++ G LG L P+D L
Sbjct: 462 GKISFAREVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 520
Query: 423 LSN 425
LS+
Sbjct: 521 LSS 523
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 169/365 (46%), Gaps = 3/365 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K++H LK+ D V +Y A ++FDE+P ++ WN I
Sbjct: 27 AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G AID + ++ G P+ T+ L ACS ++ G ++H G + +V V
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C LVDFY KC + A+ +F + ++ V+W +M+ ++ Q+ + + EG+
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P I VL L G+++H V+ + + VG+ L+DMY KC + A
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M RN V W+A+IGGY AL F++M ++ P VTL VL AC++
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMI-LKDAMDPTPVTLGSVLRACAKL 325
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+ +G K+ + +K G ++ + + G++D A M + ++S + A
Sbjct: 326 TDLSRGRKL-HCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVS-FSA 383
Query: 389 LLNAC 393
+++ C
Sbjct: 384 IVSGC 388
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 6/279 (2%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L AC L +++H +++ + + SV + L Y CN+V LA+ +FD I
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ + + W ++ Y N + ++ + GV P + VL AC+ + +E G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H+ A +E ++FV +ALVD Y KCG + +A+ F+ M R++V WNA+I G + G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
D A+ +M E + PN T+V VL A A+ G K + ++ G
Sbjct: 190 LCDDAVQLIMQMQE---EGICPNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGV 245
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++D+ + + A +I M +R +S W A++
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS-WSAMI 283
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + L + +H +K + V L +Y C + A F+++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
++ WN II YA G D A+ + M + PN T VL ACS A+E G++I
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVR--PNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+S +G++ +VD + G++ A + M R ++ W A++ C +YG
Sbjct: 132 -HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLYG 189
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 325/605 (53%), Gaps = 36/605 (5%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA--------------------- 51
F LF+A AL P+ +QLHA A SG D F
Sbjct: 109 FSHLFRACRALR-PL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 52 ----------FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
F Y K G A K+FDEMPERN+ATWNA ++ G + ++ F++
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+RR G PD + C+ + GRQ+H ++VRSG D ++ V + L Y +C
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ + V + + VS +++ QN + E + F R GV S +S+
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C+ +A L G+ +H +KA V+ + V + LV MY +CG + D+E F +
Sbjct: 346 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 405
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
+A+I Y GH A+ F++M M A P+ VT + +L ACS +G E+GM F M
Sbjct: 406 SAMISAYGFHGHGQKAIELFKQM--MNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 463
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
T YG++P +HY CVVDLLGR+G +D A +I MP+ P +W LL+AC+ ++
Sbjct: 464 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDM 523
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
A + +LDP+DS ++VLLSN+ A + RW + VRK M+D ++K G SW+ +K
Sbjct: 524 AERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKG 583
Query: 462 RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
IH F D SH R EI L ++ +++ GY PD + L+D+E+EEK + HHSEK
Sbjct: 584 HIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEK 643
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+AF +++P GVPIR+ KNLR+C DCH A K +S + GRE++VRD +RFH F DG CS
Sbjct: 644 LAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCS 703
Query: 582 CSDYW 586
C DYW
Sbjct: 704 CRDYW 708
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 2/338 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + P++F +F+ + L VTG+Q+HA ++SG D+ VG S MY + G
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + + +P ++ + N I+ G + A++ F +R G D++TF + +++
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD + L G+Q+HG ++++G D V V LV Y +C +G ++ VF G +
Sbjct: 346 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 405
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y + + ++F G EP D ++L AC+ E G + K
Sbjct: 406 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 465
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
++ ++ + +VD+ G+ G + +AE MP + V W ++ Q + DMA
Sbjct: 466 TYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAE 525
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+ + + +YV L + + R G V + K
Sbjct: 526 RIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRK 563
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 156/335 (46%), Gaps = 16/335 (4%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTG-LKDDADKMFDEMPERNLATWNAYISNAVLGG 90
L AL+L + D FV A TG L+D + F + + A +++ A
Sbjct: 66 LVALSLDTVATKDEFVRLCA------TGRLRDALRRPFRGVLWSDAARLFSHLFRACRAL 119
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
RP + AF +G D T + A +D L R+L + R NV N
Sbjct: 120 RPLRQLHAFAAT--SGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 173
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L Y K ++G A+ +FD + ++N +W +M+ +E FL RREG+ P
Sbjct: 174 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 233
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+F + SV CA + + GR VHA V++ ++ ++ VGS+L MY +CG +Q+ E
Sbjct: 234 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 293
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+P ++V N II G G ++ AL F M S+ A + VT V +S+CS A
Sbjct: 294 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA--DVVTFVSAISSCSDLAA 351
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ +G +I + +K G+ C+V + R G
Sbjct: 352 LAQGQQI-HGQVMKAGVDKVVPVMTCLVHMYSRCG 385
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 318/531 (59%), Gaps = 10/531 (1%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K G D+A ++FDEM ER++ TW ++ G N +D + E +++ +
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVT----GYGQNNRVDDARKIFDVMPEKTEVSWTS 239
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L ++ +L + V CN ++ G+ E+ A+ VFD + ++N
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPVKP----VIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
D SW +++ ++ +N E +F+ +++GV P + S+LS CA +A L G+ VHA
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
V+ + +++V S L+ MY KCG + +++ F++ P ++++ WN+II GYA G +
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F EM + PN VT V LSACS AG VE+G+KI+ SM +G+KP HYAC
Sbjct: 416 ALKVFCEM-PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC 474
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VD+LGRAG + A E+I M + P +VWG+LL ACR + + ++ A L +++P +
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF-QAKDTSHER 475
SG ++LLSNM+A+ GRW + +RK MK ++K GCSW V+N++H F + SH
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
I +L +L ++ AGY PD ++AL+DV+EEEK+ + +HSE++A+A+ L+ + G+
Sbjct: 595 QESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGI 654
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+C DCH+A K IS + RE+I+RD NRFH F +G CSC DYW
Sbjct: 655 PIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 173/442 (39%), Gaps = 102/442 (23%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y K G D+A K+FD MPERN+ +W A + V G+ A F + +
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 115 CAFL------NACS------DCSLLQLGRQLHGFL-------VRSGFDG----NVSVCNG 151
FL +AC D + +HG R FD +V
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
+V YG+ N V A+ +FD + +K +VSW SML+ YVQN E+ ++F V P
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF------EVMP- 261
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ V++ A I+GL G+ G I A F+
Sbjct: 262 ---VKPVIACNAMISGL-----------------------------GQKGEIAKARRVFD 289
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
M ERN W +I + G AL F M P + TL+ +LS C+ ++
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR--PTFPTLISILSVCASLASL 347
Query: 332 EKGMK------------------IFYSMTLKYG--IK--------PGAE--HYACVVDLL 361
G + + +M +K G +K P + + ++
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 362 GRAGLVDRAYEIIKEMPM----RPTISVWGALLNACRVYGKPELG-RI--AADNLFKLDP 414
GL + A ++ EMP+ +P + A L+AC G E G +I + +++F + P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 415 NDSGNHVLLSNMFAATGRWEEA 436
+ ++ + +M GR+ EA
Sbjct: 468 I-TAHYACMVDMLGRAGRFNEA 488
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 153/345 (44%), Gaps = 38/345 (11%)
Query: 56 SKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD--LIT 113
S+ G +A K+FD +++++WN+ ++ P++A F + PD +I+
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS 81
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ ++ + R++ + + NV LV Y +V +A+ +F +
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGR 232
+KN VSW ML+ ++Q+ ++ C+++ E + KD ++ + I GL + GR
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLY-----EMIPDKDN-----IARTSMIHGLCKEGR 187
Query: 233 SVHAVAV-KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
A + E ++ + +V YG+ + DA F+ MPE+ V W +++ GY
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQN 247
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + A FE M V + ++S + G + K ++F SM +
Sbjct: 248 GRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKER-----ND 296
Query: 352 EHYACVVDLLGRAGLVDRAYE---IIKEMPMRPTISVWGALLNAC 393
+ V+ + R G A + ++++ +RPT ++L+ C
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 1 MRRECISPNDFTFPCLFKASS------ALHIPVTGKQLHALALKSGQIHDVFVGCSAFDM 54
M+++ + P TFP L S +LH GKQ+HA ++ DV+V M
Sbjct: 322 MQKQGVRP---TFPTLISILSVCASLASLH---HGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLIT 113
Y K G + +FD P +++ WN+ IS G + A+ F + +G +P+ +T
Sbjct: 376 YIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
F A L+ACS +++ G +++ + G + +VD G+ A + D +
Sbjct: 436 FVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Query: 173 IDKNDVS-WCSML 184
+ D + W S+L
Sbjct: 496 TVEPDAAVWGSLL 508
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 32/284 (11%)
Query: 136 FLVRSGFDGNVS--VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
L+R + + N + + ++ A+ +FD K+ SW SM+ Y N
Sbjct: 5 ILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP 64
Query: 194 ENGCQMFLTARREGVEPKDFMIS--SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ ++F P +IS ++S + ++ R V + E N+ +
Sbjct: 65 RDARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWT 114
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALV Y G + AE F KMPE+N V W ++ G+ G D A +E + A
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA 174
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
+ + +C + G V++ +IF M+ + I + +V G+ VD A
Sbjct: 175 RTSMIHGLC------KEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDAR 223
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDP 414
+I MP + +S W ++L G + GRI A+ LF++ P
Sbjct: 224 KIFDVMPEKTEVS-WTSML-----MGYVQNGRIEDAEELFEVMP 261
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 325/605 (53%), Gaps = 36/605 (5%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA--------------------- 51
F LF+A AL P+ +QLHA A SG D F
Sbjct: 47 FSHLFRACRALR-PL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 52 ----------FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
F Y K G A K+FDEMPERN+ATWNA ++ G + ++ F++
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+RR G PD + C+ + GRQ+H ++VRSG D ++ V + L Y +C
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ + V + + VS +++ QN + E + F R GV S +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C+ +A L G+ +H +KA V+ + V + LV MY +CG + D+E F +
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 343
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
+A+I Y GH A+ F++M M A P+ VT + +L ACS +G E+GM F M
Sbjct: 344 SAMISAYGFHGHGQKAIELFKQM--MNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 401
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
T YG++P +HY CVVDLLGR+G +D A +I MP+ P +W LL+AC+ ++
Sbjct: 402 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDM 461
Query: 402 GRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
A + +LDP+DS ++VLLSN+ A + RW + VRK M+D ++K G SW+ +K
Sbjct: 462 AERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKG 521
Query: 462 RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEK 521
IH F D SH R EI L ++ +++ GY PD + L+D+E+EEK + HHSEK
Sbjct: 522 HIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEK 581
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+A+AF +++P GVPIR+ KNLR+C DCH A K +S + GRE++VRD +RFH F DG CS
Sbjct: 582 LAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCS 641
Query: 582 CSDYW 586
C DYW
Sbjct: 642 CRDYW 646
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 2/338 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + P++F +F+ + L VTG+Q+HA ++SG D+ VG S MY + G
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + + +P ++ + N I+ G + A++ F +R G D++TF + +++
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD + L G+Q+HG ++++G D V V LV Y +C +G ++ VF G +
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 343
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ Y + + ++F G EP D ++L AC+ E G + K
Sbjct: 344 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 403
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
++ ++ + +VD+ G+ G + +AE MP + V W ++ Q + DMA
Sbjct: 404 TYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAE 463
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+ + + +YV L + + R G V + K
Sbjct: 464 RIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRK 501
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 156/335 (46%), Gaps = 16/335 (4%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTG-LKDDADKMFDEMPERNLATWNAYISNAVLGG 90
L AL+L + D FV A TG L+D + F + + A +++ A
Sbjct: 4 LVALSLDTVATKDEFVRLCA------TGRLRDALRRPFRGVLWSDAARLFSHLFRACRAL 57
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
RP + AF +G D T + A +D L R+L + R NV N
Sbjct: 58 RPLRQLHAFAAT--SGAATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWN 111
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L Y K ++G A+ +FD + ++N +W +M+ +E FL RREG+ P
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 171
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+F + SV CA + + GR VHA V++ ++ ++ VGS+L MY +CG +Q+ E
Sbjct: 172 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 231
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+P ++V N II G G ++ AL F M S+ A + VT V +S+CS A
Sbjct: 232 RMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAA--DVVTFVSAISSCSDLAA 289
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ +G +I + +K G+ C+V + R G
Sbjct: 290 LAQGQQI-HGQVMKAGVDKVVPVMTCLVHMYSRCG 323
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 320/567 (56%), Gaps = 36/567 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T+P K+ +A V G+Q+H+ + G +VFV SA MY++ G DDA +M
Sbjct: 120 PDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQM 179
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSL 126
F+EM R++ +WNA IS G A+D F L +PD T + L +
Sbjct: 180 FEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS------ 233
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+G+ + ++ L K VFD + K +SW +ML V
Sbjct: 234 --MGK-------------------------ARVEDIALLKGVFDEMRFKGLISWNAMLAV 266
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y N ++F+ +++G+EP +++VL +C ++ L LG+ +H V + + +
Sbjct: 267 YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSS 326
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMY CG +++A F+ M R++V W +II Y GH A+ FE+M
Sbjct: 327 MLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCG 386
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E P+ + V +L+ACS AG ++ G FYSMT ++ I P EHYAC+VDLLGRAG
Sbjct: 387 QGLE--PDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 444
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ AY+ I MP++P VWGALL ACR++ ++G +AAD+L +L P +G +VLLSN+
Sbjct: 445 IREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNI 504
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A GRW + +VR M+ GIKK G S + +R+H F DTSH ++ I L++L
Sbjct: 505 YARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSEL 564
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++ GY P+ L+DVEEE+K + HSEK+A+AF LI PG PIRIT NLR C
Sbjct: 565 LRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTC 624
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFH 573
DCH A K IS I GRE+I++D NR H
Sbjct: 625 SDCHHAAKLISTIAGREIILKDVNRIH 651
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARI 225
V D D+ V + +L + +F + R +G P + L +CA
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
GL LGR +H+ + ++GN+FV + + MY +CG DA F +M R++V WNA+I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
G+AH G A+ F E+ +++C P+ T+ +L + +A
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPK-PDAGTMASILPSMGKA 237
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 148/355 (41%), Gaps = 55/355 (15%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSDC 124
+ D P+R +N + ++A+ F ++R G PD T+ L +C+
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L LGRQ+H R G DGNV V + + Y +C A +F+ + ++ VSW +M+
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV---HAVAVKA 241
+ AGL GR++ +
Sbjct: 196 SGFAH------------------------------------AGL-FGRAMDVFRELVALQ 218
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEI---AFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
C + + ++++ GK ++D + F++M + L+ WNA++ Y + +M +
Sbjct: 219 CPKPDAGTMASILPSMGK-ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNN---EMHV 274
Query: 299 SSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ E M+ + + P+ VTL VL +C A+ G +I + + + + +
Sbjct: 275 EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRI-HEVIKRRRMCSSMLLENAL 333
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
+D+ G + A ++ M R +S W ++++A YG+ GR A D K+
Sbjct: 334 MDMYANCGCLKEARDVFDSMGTRDVVS-WTSIISA---YGRHGHGREAIDLFEKM 384
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+++ I P+ T + + + GK++H + + + + + DMY+ G
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +FD M R++ +W + IS G + AID F + G EPD I F A L A
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 402
Query: 121 CSDCSLLQLGRQ 132
CS LL +G+
Sbjct: 403 CSHAGLLDMGKH 414
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 330/563 (58%), Gaps = 10/563 (1%)
Query: 31 QLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
QLH LAL+SG D + + MY DA + FDE+P+ N A S V
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG--RQLHGFLVRSGFDGNVS 147
++++ F + + + A + + + G LH + + GF+ N
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233
Query: 148 VCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEEENGCQMFLTA 203
V N ++D Y K ++ +A+ VFD ++++ VSW SM+ +Y QN E G +
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
G++ +S+VL ACA ++ G+ +H V+ +E N++VG+++VDMY KCG +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+ A AF K+ E+N++ W+A+I GY G AL F EM R PNY+T + VL+
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMK--RSGLRPNYITFISVLA 410
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS AG +++G + +M ++GI+ G EHY C+VDLLGRAG +D AY +IKEM ++P
Sbjct: 411 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 470
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
++WGALL+ACR++ EL ++ LF+LD ++SG +VLLSN++A W++ + +R +
Sbjct: 471 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLV 530
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K I+K G S +K +I++F D SH ++ EI + L KL E M+ AGY+P+T L
Sbjct: 531 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVL 590
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+D++EEEK + + HSEK+A+AF L+ P I I KNLR+C DCH+A KFI+ I RE
Sbjct: 591 HDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITERE 650
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
+I+RD RFH F DG CSC DYW
Sbjct: 651 IIIRDLQRFHHFKDGLCSCRDYW 673
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 347/619 (56%), Gaps = 36/619 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
+R E ++PN T C+ A + L TG++++A SG +++D+ V + DMY K
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCN 285
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++FDE NL NA SN V G + A+ F + +G PD I+ + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+CS + G+ HG+++R+GF+ ++CN L+D Y KC+ A +FD + +K V+
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 180 WCSMLVVYVQNYEEENGCQMFLT--------------------------------ARREG 207
W S++ YV+N E + + F T +EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + S+ SAC + L+L + ++ K ++ ++ +G+ LVDM+ +CG + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
FN + R++ W A IG A G+A+ A+ F++M + P+ V V L+ACS
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK--PDGVAFVGALTACSH 583
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++G +IFYSM +G+ P HY C+VDLLGRAGL++ A ++I++MPM P +W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV G E+ AA+ + L P +G++VLLSN++A+ GRW + VR MK+ G
Sbjct: 644 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K G S I ++ + H F + D SH I+AML ++ + G++PD + L DV+
Sbjct: 704 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 763
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E+EK+ + HSEK+A+A+GLI+ G IRI KNLR+C DCHS KF S + RE+I+R
Sbjct: 764 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 568 DNNRFHRFWDGYCSCSDYW 586
DNNRFH G CSC D+W
Sbjct: 824 DNNRFHYIRQGKCSCGDFW 842
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 10/404 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ISP+ +TFP A + G Q+H L +K G D+FV S Y++ G
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLN 119
D A K+FDEM ERN+ +W + I K+A+D F + R P+ +T ++
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L+ G +++ F+ SG + N + + LVD Y KCN + +AK +FD N
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+M YV+ +F GV P + S +S+C+++ + G+S H +
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ E + +AL+DMY KC A F++M + +V WN+I+ GY G D A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+FE M N V+ ++S + E+ +++F SM + G+ +
Sbjct: 425 TFETMPE------KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 360 LLGRAGLVDRA---YEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G G +D A Y I++ ++ + + L++ G PE
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 5/313 (1%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
+N+ I G AI F+ + +G PD TF L+AC+ G Q+HG +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+ G+ ++ V N LV FY +C E+ A+ VFD + ++N VSW SM+ Y + ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 199 MFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F R E V P + V+SACA++ LE G V+A + +E N + SALVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KC +I A+ F++ NL NA+ Y QG AL F M M P+ ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM--MDSGVRPDRIS 339
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
++ +S+CS+ + G K + L+ G + ++D+ + D A+ I M
Sbjct: 340 MLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 378 PMRPTISVWGALL 390
+ T+ W +++
Sbjct: 399 SNK-TVVTWNSIV 410
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/615 (35%), Positives = 344/615 (55%), Gaps = 38/615 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FTFP L KA + + GK +H +A+K+ DVFV S Y+ G D A +
Sbjct: 238 PNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLV 297
Query: 68 FD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
F+ E +++ +WN+ ++ V GG P A+D F +R G P+ +T + ++AC+
Sbjct: 298 FEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTM 357
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LGR++ ++ R+ N++VCN +D + KC EV +A+ +FD + ++ VSW +++
Sbjct: 358 NLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIID 417
Query: 186 VY---------------------------VQNYEEENGCQMFLTARRE------GVEPKD 212
Y + YE+ + L RE G P
Sbjct: 418 GYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQ 477
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ S LSACA++ +++G +H K ++ N + ++L+DMY K G ++ A F+
Sbjct: 478 VTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHS 537
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ +++ W+A+I G A G + A+ F +M + + PN VT +L ACS +G V+
Sbjct: 538 IGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK--PNSVTFTNLLCACSHSGLVD 595
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G ++F M YG+ P +HY+C+VD+LGRAG ++ A + I+ MP+ P+ SVWGALL A
Sbjct: 596 EGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGA 655
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
C ++G EL A L +++P + G +VLLSN++A TG WE +R++M+D G+KK
Sbjct: 656 CCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKET 715
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE-K 511
GCS I + +H F D +H + +I A L ++ +++ GY+ +T L VEEEE K
Sbjct: 716 GCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMK 775
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSEK+A+AFGLI IRI KNLR+C DCH+ K +S + GR++++RD R
Sbjct: 776 EKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYR 835
Query: 572 FHRFWDGYCSCSDYW 586
FH F G+CSC DYW
Sbjct: 836 FHHFSGGHCSCQDYW 850
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 220/459 (47%), Gaps = 49/459 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDM--YSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+HA L++ ++HD + F +S D A K+FD++P+ NL +WN I
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215
Query: 88 LGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
P ++ FI L + P+ TF + A ++ +G+ +HG +++ F +V
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
V N L+ FY C + LA +VF+ I +K+ VSW SM+ +VQ + +F R
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
EGV P + SV+SACA+ L LGR V + + N+ V +A +DM+ KCG ++
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395
Query: 265 DAE----------------------------IA---FNKMPERNLVCWNAIIGGYAHQGH 293
A IA F+ MP +++ WN +I GY G
Sbjct: 396 IARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR 455
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
AL+ F E+ + A P+ VTL+ LSAC++ GA++ G I + K I+
Sbjct: 456 PKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWI-HGYIKKERIQLNRNL 514
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
++D+ ++G V++A E+ + + + VW A++ ++G+ E AA LF LD
Sbjct: 515 ATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMHGRGE----AAIELF-LD 568
Query: 414 PNDSG---NHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
++ N V +N+ A +G +E + EM+ V
Sbjct: 569 MQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERV 607
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 35/332 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + PN T + A + G+++ ++ + ++ V + DM+ K G
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393
Query: 61 KDDADKMFDEMPERNLAT-------------------------------WNAYISNAVLG 89
+ A +FD M +R++ + WN IS
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 90 GRPKNAIDAF--INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
GRPK A+ F + L ++G PD +T + L+AC+ + +G +HG++ + N +
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+ L+D Y K +V A VF I +K+ W +M+ + E ++FL +
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDA 266
V+P +++L AC+ ++ G+ + + V S +VD+ G+ G +++A
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 267 EIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
MP + W A++G G+ ++A
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELA 665
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 321/586 (54%), Gaps = 37/586 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I P+ T P + K+ +AL G+ LH +K G D FV S DMY K G
Sbjct: 129 MLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGE 188
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++FDE P+RN A ++ + +N
Sbjct: 189 LGFGLQLFDESPQRNKAE-------------------------------SILLWNVLING 217
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C C + L + L + + N N L++ + + ++ A+ +F + +KN VSW
Sbjct: 218 C--CKVGDLSKA--ASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSW 273
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + QN + E MF EGV P D + S L AC +I L++G +H
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSS 333
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ N +G+ALVDMY KCG+I+ A F + ++L+ W+ +I G+A G D AL
Sbjct: 334 NGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQC 393
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M S P+ V + +L+ACS +G V++G+ F SM L Y I+P +HY +VDL
Sbjct: 394 FVKMKSAGIN--PDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDL 451
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A I+ MP+ P +WGAL ACR + E+ + A+ L +L+P G++
Sbjct: 452 LGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSY 511
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V LSN++AA GRWE+ + VR MK+ G++K G S+I V+ ++H F A D +H R EI
Sbjct: 512 VFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEIS 571
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L ++ K GY+P+T + L+++EEEEK +G HSEK+ALAFGLI+ PG IRI
Sbjct: 572 LKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIV 631
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCHS K+ S + RE+I+RD RFH F DG CSC DYW
Sbjct: 632 KNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 43/260 (16%)
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+L QL Q+H + N V L+ + A +F N + +++
Sbjct: 52 TLPQL-HQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALI 110
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
+N E F+ R + P + VL + A + + LGR +H +K +E
Sbjct: 111 RGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 245 GNIFVGSALVDMYG-----------------------------------KCGSIQDAEIA 269
+ FV +LVDMY K G + A
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASL 230
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F MPERN WN++I G+ G D A F +M N V+ +++ S+ G
Sbjct: 231 FEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPE------KNVVSWTTMINGFSQNG 284
Query: 330 AVEKGMKIFYSMTLKYGIKP 349
EK + +F+ M L+ G++P
Sbjct: 285 DHEKALSMFWRM-LEEGVRP 303
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 11/591 (1%)
Query: 1 MRRECISPNDFT----FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS 56
M+ E I PN T P + +A + H GK LH ++ + V VG DMY+
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGH----GKALHGYCVRRSFDNGVVVGTGLLDMYA 256
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFC 115
K A K+FD M RN +W+A I V K A++ F + + +P +T
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L AC+ + L GR+LH ++++ G ++ + N L+ Y KC + A FD + K
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK 376
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ VS+ +++ VQN +F + G++P + VL AC+ +A L+ G H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ + + +AL+DMY KCG I A FN+M ++V WNA+I GY G
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F ++ ++ + P+ +T +C+LS+CS +G V +G F +M+ + I P EH
Sbjct: 497 EALGLFHDLLALGLK--PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VD+LGRAGL+D A+ I+ MP P + +W ALL+ACR++ ELG + + L P
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+GN VLLSN+++A GRW++A +R KD G+KK GCSWI + +H F D SH +
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
++I L +L EMK GY + +F DVEEEEK + +HSEK+A+AFG++ + G
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGR 734
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI +TKNLR+CGDCH+A KF++ I RE+ VRD NRFH F +G C+C D+W
Sbjct: 735 PILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 207/423 (48%), Gaps = 7/423 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN +T+P + KA S L G ++H+ A G DVFV + D Y+K G+ +A
Sbjct: 105 VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ 164
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F M R++ WNA I+ L G +A+ + ++ G P+ T L +
Sbjct: 165 RLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAK 224
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+ LHG+ VR FD V V GL+D Y KC + A+ +FD + +N+VSW +M+
Sbjct: 225 ALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIG 284
Query: 186 VYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YV + + ++F ++ ++P + SVL ACA++ L GR +H +K
Sbjct: 285 GYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSV 344
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+I +G+ L+ MY KCG I DA F++M ++ V ++AI+ G G+A +ALS F M
Sbjct: 345 LDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMM 404
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ P+ T++ VL ACS A++ G + + G ++D+ +
Sbjct: 405 QLSGID--PDLTTMLGVLPACSHLAALQHGF-CSHGYLIVRGFATDTLICNALIDMYSKC 461
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVY--GKPELGRIAADNLFKLDPNDSGNHVL 422
G + A E+ M R I W A++ ++ G LG L P+D L
Sbjct: 462 GKISFAREVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 520
Query: 423 LSN 425
LS+
Sbjct: 521 LSS 523
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 170/365 (46%), Gaps = 3/365 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
K++H LK+ D V +Y A ++FDE+P ++ WN I
Sbjct: 27 AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G AID + ++ G P+ T+ L ACS ++ G ++H G + +V V
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C LVDFY KC + A+ +F + ++ V+W +M+ ++ Q+ + + EG+
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P I VL L G+++H V+ + + VG+ L+DMY KC + A
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ M RN V W+A+IGGY AL F++M ++ P VTL VL AC++
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMI-LKDAMDPTPVTLGSVLRACAKL 325
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
+ +G K+ + +K G ++ + + G++D A EM + ++S + A
Sbjct: 326 TDLSRGRKL-HCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVS-FSA 383
Query: 389 LLNAC 393
+++ C
Sbjct: 384 IVSGC 388
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 6/279 (2%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L AC L +++H +++ + + SV + L Y CN+V LA+ +FD I
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ + + W ++ Y N + ++ + GV P + VL AC+ + +E G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H+ A +E ++FV +ALVD Y KCG + +A+ F+ M R++V WNA+I G + G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
D A+ +M E + PN T+V VL A A+ G K + ++ G
Sbjct: 190 LCDDAVQLIMQMQE---EGICPNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGV 245
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++D+ + + A +I M +R +S W A++
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS-WSAMI 283
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + L + +H +K + V L +Y C + A F+++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
++ WN II YA G D A+ + M + PN T VL ACS A+E G++I
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVR--PNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+S +G++ +VD + G++ A + M R ++ W A++ C +YG
Sbjct: 132 -HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLYG 189
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 337/612 (55%), Gaps = 33/612 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T C+ A + L GK++ + + G + + DMY K G A
Sbjct: 227 VEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAAR 286
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FDE +NL +N +SN V + + + + G PD +T + + AC+
Sbjct: 287 QIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLG 346
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN------------------------- 160
L +G+ H +++R+G +G ++ N ++D Y KC
Sbjct: 347 DLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIA 406
Query: 161 ------EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
++ LA +FD +++++ VSW +M+ VQ E ++F + +G+
Sbjct: 407 GLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVT 466
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ + SAC + L+L + V K + ++ +G+ALVDM+ +CG A F +M
Sbjct: 467 MVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME 526
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
+R++ W A IG A +G+ + A+ F EM + + P+ V V +L+ACS G+V++G
Sbjct: 527 KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK--PDDVVFVALLTACSHGGSVDQG 584
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
++F+SM +GI+P HY C+VDLLGRAGL++ A ++I+ MP+ P VWG+LL ACR
Sbjct: 585 RQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACR 644
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+ EL AA+ L +L P G HVLLSN++A+ G+W + VR +MK+ G++K G
Sbjct: 645 KHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGS 704
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
S I V+ IH F + D SH NT I ML ++ + AGY+PDT L DV+E+EK
Sbjct: 705 SSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHL 764
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+A+GLI G+PIR+ KNLR+C DCHS K +S + RE+ VRDNNR+H
Sbjct: 765 LSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHF 824
Query: 575 FWDGYCSCSDYW 586
F +G+CSC DYW
Sbjct: 825 FKEGFCSCRDYW 836
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 206/443 (46%), Gaps = 35/443 (7%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFP L A S + G Q+H LK G D+FV S Y++ G D
Sbjct: 126 IVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGR 185
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD M ERN+ +W + I+ K A+ F + G EP+ +T ++AC+
Sbjct: 186 KLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLK 245
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG+++ ++ G + + + N LVD Y KC ++ A+ +FD +KN V + +++
Sbjct: 246 DLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMS 305
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV + + + ++G P + S ++ACA++ L +G+S HA ++ +EG
Sbjct: 306 NYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEG 365
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +A++DMY KCG + A F MP + +V WN++I G G ++A F+EM
Sbjct: 366 WDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEML 425
Query: 306 ----------------------------SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMK 336
M+ + +P + VT+V + SAC GA++ K
Sbjct: 426 ERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLA-K 484
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ K I + +VD+ R G A + K M R +S W A + +
Sbjct: 485 WVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRD-VSAWTAAIGVMAME 543
Query: 397 GKPELGRIAADNLF---KLDPND 416
G E G I N K+ P+D
Sbjct: 544 GNTE-GAIELFNEMLEQKVKPDD 565
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 26/432 (6%)
Query: 30 KQLHALALKSGQI-------------HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
KQLH +K G + V +G Y++ DD M +L
Sbjct: 42 KQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNM------ASL 95
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+N I G AI ++ + G PD TF L+ACS L G Q+HG
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGA 155
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENG 196
+++ G +G++ V N L+ FY +C +V L + +FDG++++N VSW S++ Y +
Sbjct: 156 VLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEA 215
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+F GVEP + V+SACA++ LELG+ V + + +E + + +ALVDM
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDM 275
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCG I A F++ +NLV +N I+ Y H A L +EM ++ P+ V
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEM--LQKGPRPDKV 333
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T++ ++AC++ G + G K ++ L+ G++ ++D+ + G + A ++ +
Sbjct: 334 TMLSTIAACAQLGDLSVG-KSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEH 392
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
MP + T+ W +L+ G EL D + + D + +EEA
Sbjct: 393 MPNK-TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMI---GALVQVSMFEEA 448
Query: 437 DLVRKEMKDVGI 448
+ +EM++ GI
Sbjct: 449 IELFREMQNQGI 460
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/600 (39%), Positives = 321/600 (53%), Gaps = 21/600 (3%)
Query: 3 RECISPNDFTFPCLFK--ASSALHIP----VTGKQLHALALKSGQIHDVFVGCSAFDMYS 56
RE I+P T P L A LH+P KQ+HA AL++ + + ++
Sbjct: 2 REAIAPAPSTHPALRHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHPLLAKHLLFH 61
Query: 57 KTGLKDDADKMFDE-------MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
L+ + +P+ + + N + A P+ A+ RR P
Sbjct: 62 LASLRAGPPPLLYAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALH---RRRLAPP 118
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D T+ L AC+ L+ G LH ++G V V N LV YG C A VF
Sbjct: 119 DTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVF 178
Query: 170 DGI--IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
D I +++N VSW S++ + N +F + P F I SVL+ACA I
Sbjct: 179 DEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGA 238
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIG 286
L LGR VH A K + GN VG+AL+D+Y KCG ++DA F +M R +V W ++I
Sbjct: 239 LTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIV 298
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
G A G AL F M R +P +T+V VL ACS G V+ G + F M KYG
Sbjct: 299 GLAGNGFGKDALELFGLMERERL--IPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYG 356
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
I PG EH C+VDLLGRAG V+ A+ I MP+ P VW LL AC ++ K ELG A
Sbjct: 357 IAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAW 416
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
L +LDP SG++VLLSN++AA GRW +A ++RK M G++K G S + ++N ++ F
Sbjct: 417 ARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEF 476
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
D SH + +I L ++ E ++ GY+P T+ L D+EEEEK T + +HSE++A+AF
Sbjct: 477 VMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAF 536
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
L+ PG PIRI KNLR+CGDCH K IS + RE+IVRD +RFH F G CSC DYW
Sbjct: 537 ALLKSLPGSPIRIVKNLRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 159/331 (48%), Gaps = 5/331 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RR P+ T+P L +A + L G+ LHA A K+G + VFV S Y GL
Sbjct: 112 RRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLF 171
Query: 62 DDADKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A ++FDE+P ERNL +WN+ ++ GRP + F PD T + L
Sbjct: 172 ESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLT 231
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
AC++ L LGR++H F + G GN V N L+D Y KC V A VF+ + + + V
Sbjct: 232 ACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVV 291
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAV 237
SW S++V N ++ ++F RE + P D + VL AC+ ++ G R + +
Sbjct: 292 SWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEM 351
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
K + I +VD+ G+ G +++A MP E N V W ++G A ++
Sbjct: 352 QDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLEL 411
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+++ + + +YV L + +A R
Sbjct: 412 GEAAWARLVELDPGHSGDYVLLSNLYAAVGR 442
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 341/628 (54%), Gaps = 60/628 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLKDDAD 65
P+ F FPC K L KQLHA +K+ QI D F S D A
Sbjct: 15 PSSF-FPC--KTMQDL------KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYAR 65
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDC 124
K+F M N ++N I P +A+ FI + EP+ TF + AC
Sbjct: 66 KIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRA 125
Query: 125 SLLQLGRQLHGFLVRSGFD----------------------------------------- 143
L+ GRQ+HG V+ G D
Sbjct: 126 ERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDK 185
Query: 144 -----GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
G+V + N ++D Y + E+ +A+ +FD + ++ VSW M+ Y Q+ + +
Sbjct: 186 KRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVE 245
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+F + V P + SVL A +R+ LELG+ VH AV+ + + +GSAL+DMY
Sbjct: 246 VFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYA 305
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCGSI+ A F +P+RN+V W+ II G A G A L FE+M R +P+ VT
Sbjct: 306 KCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDME--RAGVMPSDVTY 363
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ +LSACS AG V +G F M G++P EHY C+VDLLGRAGL++ + E+I MP
Sbjct: 364 IGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMP 423
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
++P +W ALL AC+++G E+G+ A++L +L P+DSG++V LSN++A+ G WE
Sbjct: 424 IKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAK 483
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
VR MK++ ++K GCSWI + IH F +D SH ++ +I +ML ++ + GY P+
Sbjct: 484 VRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPN 543
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
T L +++EE+K + + +HSEKIA+AFGLI+ P P+RITKNLRIC DCHS+ K IS
Sbjct: 544 TTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISK 603
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I R++IVRD RFH F +G CSC DYW
Sbjct: 604 IYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 168/394 (42%), Gaps = 51/394 (12%)
Query: 1 MRREC-ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M +C + PN FTFP +FKA G+Q+H LA+K G D FV + MY G
Sbjct: 102 MVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCG 161
Query: 60 LKDDADK----------------------------------------------MFDEMPE 73
+ +DA + +FDEMP+
Sbjct: 162 VMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQ 221
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R++ +WN I+ G K A++ F ++ P+ +T + L A S L+LG+ +
Sbjct: 222 RSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWV 281
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H + VR+ + + + L+D Y KC + A VF+G+ +N V+W +++ +
Sbjct: 282 HLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRA 341
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV--HAVAVKACVEGNIFVGS 251
++ F R GV P D +LSAC+ + GR H V V +E I
Sbjct: 342 KDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSG-LEPRIEHYG 400
Query: 252 ALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+VD+ G+ G ++++E MP + + V W A++G G+ +M E + +
Sbjct: 401 CMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPH 460
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+YV L + ++ V K + M ++
Sbjct: 461 DSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 494
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 335/589 (56%), Gaps = 9/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ T + A L G+ +H +KS D+ + S MYS G
Sbjct: 290 MRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A+ +F M +++ +W A I++ V P A++ + + G PD IT + L+A
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L LG +LH +++G +V V N L+D Y KC V A VF I KN VSW
Sbjct: 410 CACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469
Query: 181 CSMLV-VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
S+++ + + N E +F +E ++P + SVLSACARI L G+ +HA A+
Sbjct: 470 TSLILGLRINNRSFE--ALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ V + F+ +A++DMY +CG A FN ++++ WN ++ GYA QG A +A+
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVE 586
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M + E P+ +T + +L ACS++G V +G++ F M KY + P +HYACVVD
Sbjct: 587 LFDKM--LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVD 644
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+LGRAG +D AY+ I++MP+RP ++WGALLNACR++ ELG IAA +F+ D G
Sbjct: 645 ILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGY 704
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
++LL N++A G W++ VR M++ G+ GCSW+ +K ++H F + D SH ++ EI
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEI 764
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+L +MK G+ + ++E G HSE+ A+AFGLI PG+PI +
Sbjct: 765 NGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQAIAFGLINTAPGMPIWV 823
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD--YW 586
KNL +C CH+ KFIS IV RE+ VRD +H F DG CSC D YW
Sbjct: 824 XKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 211/410 (51%), Gaps = 10/410 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN +TFP + K + + GK++HA ++ G DV VG + MY K G +A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP+R+ +WNA IS G ++ F +R +PDLIT +AC
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LGR +HG++V+S F G++S+ N L+ Y + A+ VF + K+ VSW +M+
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
V + + + EG+ P + + SVLSACA I L+LG +H +A+K +
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ V ++L+DMY KC + +A F + +N+V W ++I G + AL F +M
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493
Query: 306 -SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
SM+ PN VTL+ VLSAC+R GA+ +G +I ++ L+ G+ ++D+ R
Sbjct: 494 ESMK----PNSVTLISVLSACARIGALMRGKEI-HAHALRTGVGFDGFLPNAILDMYVRC 548
Query: 365 GLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
G R + + + ++ W LL G+ +L D + +L+
Sbjct: 549 G---RKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 190/371 (51%), Gaps = 6/371 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P G +++ L S V +G + M+ + G DA +F +M ER++ +WN +
Sbjct: 113 PDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGG 172
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G A++ + + P++ TF + L C+ S + G+++H ++R GF+ +
Sbjct: 173 YAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD 232
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V N L+ Y KC ++ A+++FD + ++ +SW +M+ Y +N G ++F R
Sbjct: 233 VDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRE 292
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
V+P +++V SAC + LGR VH VK+ G+I + ++L+ MY G +++
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSA 324
AE F++M +++V W A+I + + E M E + P+ +TLV VLSA
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSH---KLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ G ++ G+++ + + +K G+ ++D+ + VD A E+ + + + +S
Sbjct: 410 CACIGHLDLGIRL-HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468
Query: 385 VWGALLNACRV 395
W +L+ R+
Sbjct: 469 -WTSLILGLRI 478
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/630 (35%), Positives = 351/630 (55%), Gaps = 72/630 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ + L + + G+Q+H ++SG + DVFVG + DMY+K G +DA+
Sbjct: 227 ILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDAN 286
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----------------- 108
K+F+ M +++ TWNA ++ GR ++A+ F +R E
Sbjct: 287 KVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRG 346
Query: 109 ------------------PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG------ 144
P+++T + L+AC+ L G++ H + V+ G
Sbjct: 347 FGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDT 406
Query: 145 -NVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFL 201
+++V N L+D Y KC + +A+ +FD I D++ V+W M+ Y Q+ + + Q+F
Sbjct: 407 DDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFS 466
Query: 202 TARR--EGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNI-FVGSALVDMY 257
+ + P DF IS VL ACAR+A L+ G+ +HA V ++ ++ ++ FV + L+DMY
Sbjct: 467 EMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMY 526
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYV 316
K G + A++ F+ M +RN V W +++ GY G ++ A F+EM R EA V + +
Sbjct: 527 SKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEM---RKEALVLDGI 583
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T + VL ACS +G + +G+ PG EHYAC+VDLLGRAG + A +I +
Sbjct: 584 TFLVVLYACSHSG-------------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLIND 630
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
MP+ PT VW ALL+ACR++ EL AA L +L ++ G + LLSN++A RW++
Sbjct: 631 MPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDV 690
Query: 437 DLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYI 496
+ MK GIKK G SW+ + + F D +H ++ +I L L + +KA
Sbjct: 691 ARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA---- 746
Query: 497 PDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
NF+L+DV++EEK ++ HSEK+ALA+ ++ +PPG PIRITKNLRICGD HSA +I
Sbjct: 747 ---NFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYI 803
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S IV E+I+RD++RFH+F +G CSC YW
Sbjct: 804 SMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 208/443 (46%), Gaps = 50/443 (11%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ +TFP +FKA + G +H ++ G +VFV + MY K A K
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182
Query: 67 MFDEMPERNL---ATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACS 122
+FDE+ R + TWN+ +S P A+ F + G PD + L C
Sbjct: 183 VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 242
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
L GRQ+HGF VRSG +V V N LVD Y KC ++ A VF+ + K+ V+W +
Sbjct: 243 YLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNA 302
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVE--------------------------------- 209
M+ Y QN E+ +F R E +E
Sbjct: 303 MVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCR 362
Query: 210 --PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG-------NIFVGSALVDMYGKC 260
P + S+LSACA + L G+ H +VK ++G ++ V +AL+DMY KC
Sbjct: 363 CRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC 422
Query: 261 GSIQDAEIAFNKM--PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
S++ A F+++ +R++V W +IGGYA G A+ AL F EM + VPN T+
Sbjct: 423 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 482
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAYEIIKEM 377
CVL AC+R A++ G +I + + I A C++D+ ++G VD A + M
Sbjct: 483 SCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 542
Query: 378 PMRPTISVWGALLNACRVYGKPE 400
R +S W +LL ++G+ E
Sbjct: 543 SKRNAVS-WTSLLTGYGMHGRSE 564
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 66/395 (16%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN I +A+ P A+ F ++ PD TF AC + S +LG +HG ++
Sbjct: 94 WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-----GIIDKNDVSWCSMLVVYVQNYEE 193
R GF+ NV VCN ++ YGKC V A+ VFD GI D V+W S++ VY +
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDS--VTWNSIVSVYSHCFVP 211
Query: 194 ENGCQMFLTARRE-----GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+F RE G+ P + ++L C + GR VH V++ + ++F
Sbjct: 212 NVAVSLF----REMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVF 267
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
VG+ALVDMY KCG ++DA F +M +++V WNA++ GY+ G + ALS F +M +
Sbjct: 268 VGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEK 327
Query: 309 ---------------------CEAV------------PNYVTLVCVLSACSRAGAVEKGM 335
CEA+ PN VTL+ +LSAC+ GA+ G
Sbjct: 328 IESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHG- 386
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD-----RAYEIIKEM-----PMRPTISV 385
K + ++K+ +K EH DL L+D ++ E+ + M P +
Sbjct: 387 KETHCYSVKFILK--GEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVT 444
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLD----PND 416
W ++ +G +FK+D PND
Sbjct: 445 WTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPND 479
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 5 CISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD--VFVGCSAFDMYSKTGLKD 62
CI PNDFT C+ A + L GKQ+HA L+ +I +FV DMYSK+G D
Sbjct: 474 CIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVD 533
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A +FD M +RN +W + ++ + GR ++A F +R+ D ITF L ACS
Sbjct: 534 TAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS 593
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSWC 181
+ G D V +VD G+ +G A +++ D I+ V W
Sbjct: 594 HSGM------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWI 641
Query: 182 SML 184
++L
Sbjct: 642 ALL 644
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 318/561 (56%), Gaps = 10/561 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP-ERNLATWNAYISNAV 87
+QLH+ LK G V + D Y+K G D A +F M +N+ +W A I +
Sbjct: 277 ARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCI 336
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A F +R G P+ +T+ L S Q+H ++++ ++ +
Sbjct: 337 QNGDIPLAAALFSRMREDGVAPNDLTYSTILTV----SEASFPPQIHAQVIKTNYECTPT 392
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V L+ Y K A +F I K+ VSW +ML Y Q + F+ G
Sbjct: 393 VGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHG 452
Query: 208 VEPKDFMISSVLSACAR-IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++P +F ISS + ACA AG++LGR HA+++K + V SALV MY + GSI++A
Sbjct: 453 LKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSAC 325
+ F + +R+L+ WN+++ GYA G++ AL F +M E + + +T + V+ C
Sbjct: 513 QCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQM---EVEGIDMDGLTFLSVIMGC 569
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ AG VE+G + F M YGI P +HYAC+VDL RAG +D +I+ MP ++
Sbjct: 570 AHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTI 629
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W ALL ACRV+ ELG++AA+ L L+P DS +VLLSN+++A G+W+E D VRK M
Sbjct: 630 WRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDT 689
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
++K AGCSWI +KN++H F A D SH + +I A L + ++K GY PDT+F +D
Sbjct: 690 KKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHD 749
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V E++K + HSE++ALAFGLIA PP P+ I KNLR+ GD H+ K +S I RE++
Sbjct: 750 VAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIV 809
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD RFH F G CSC D+W
Sbjct: 810 MRDCCRFHHFKSGVCSCGDFW 830
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 10/402 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E + PN FTF + ++ + G+ +HA ++K G VFV S +MY+K GL
Sbjct: 148 MRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGL 207
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F M R++ +WN ++ VL GR A+ F + R + T+ +N
Sbjct: 208 VEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINL 267
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DKNDVS 179
C++ L L RQLH +++ GF +V L+D Y K ++ A VF + +N VS
Sbjct: 268 CANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVS 327
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ +QN + +F R +GV P D S++L+ ++ +HA +
Sbjct: 328 WTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVI 383
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K E VG+AL+ Y K S ++A F + ++++V W+A++ YA G + A +
Sbjct: 384 KTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATN 443
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSAC-SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+F +MT + PN T+ + AC S A V+ G + F+++++K+ + +V
Sbjct: 444 AFIKMTMHGLK--PNEFTISSAIDACASPAAGVDLGRQ-FHAISIKHRCHDALCVSSALV 500
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ R G ++ A + + R +S W ++L+ +G +
Sbjct: 501 SMYARKGSIENAQCVFERQTDRDLLS-WNSMLSGYAQHGYSQ 541
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 150/300 (50%), Gaps = 6/300 (2%)
Query: 27 VTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
V GKQLHAL ++ G H D+ VG S DMY D K+F+ M +RN+ TW + ++
Sbjct: 72 VLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTG 131
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ G + + F +R G P+ TF + L+ + ++ LG+ +H ++ G
Sbjct: 132 YIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCST 191
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V VCN L++ Y KC V A+VVF + ++ VSW +++ V N + Q+F +R
Sbjct: 192 VFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRS 251
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
+ S+V++ CA + L L R +H+ +K V +AL+D Y K G +
Sbjct: 252 SITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDK 311
Query: 266 AEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLS 323
A F M +N+V W A+I G G +A + F + MR + V PN +T +L+
Sbjct: 312 ALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALF---SRMREDGVAPNDLTYSTILT 368
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 200 FLTA-RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE-GNIFVGSALVDMY 257
FL A RR+G + ++ C + LG+ +HA+ V+ + G+I VG++LVDMY
Sbjct: 42 FLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMY 101
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYV 316
S+ D F M +RN+V W +++ GY G + L MR E V PN
Sbjct: 102 MNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAG---VLLDVMSLFFRMRAEGVWPNPF 158
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T VLS + G V+ G + ++ ++K+G ++++ + GLV+ A +
Sbjct: 159 TFSSVLSMVASQGMVDLGQHV-HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCR 217
Query: 377 MPMRPTISVWGALLNACRVYGK 398
M R +S W L+ + G+
Sbjct: 218 METRDMVS-WNTLMAGLVLNGR 238
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAF-DMYSKT 58
M + PN+FT A ++ V G+Q HA+++K + HD SA MY++
Sbjct: 448 MTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKH-RCHDALCVSSALVSMYARK 506
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
G ++A +F+ +R+L +WN+ +S G + A+D F + G + D +TF + +
Sbjct: 507 GSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVI 566
Query: 119 NACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
C+ L++ G+Q +VR G + +VD Y + ++ + +G+
Sbjct: 567 MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGM 621
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 331/594 (55%), Gaps = 15/594 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ T L AS+ G+ +H AL+ G D+ +G + DMY++ G
Sbjct: 317 MLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGS 373
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F +P N +WN I+ + G+ K A++ F ++ G P T+ L A
Sbjct: 374 PEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Query: 121 CS----DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIID 174
+ + + GR+LH +V G+ ++ +V Y C + A F + D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492
Query: 175 KNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++DV SW +++ Q+ + F GV P +VL ACA A L G
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI 552
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
VH + +E N+FV +AL MYG+CGS++ A F K+ ER++V +NA+I Y+ G
Sbjct: 553 VHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A AL F M P+ + V VLSACS G ++G +IF SM YGI P +
Sbjct: 613 LAGEALKLFWRMQQEGSR--PDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC VD+LGRAG + A E+I+ M ++PT+ VW LL ACR Y + GR+A + +L
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
DP D +V+LSN+ A G+W+EA VR EM+ G++K AG SWI +K+R+H F A D S
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRS 790
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R+ EI L +L E++ GY+PDT L V+E EK + HSE++A+A G+++
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS 850
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+C DCH+A KFIS IV +E++VRD +RFH F DG CSC DYW
Sbjct: 851 TDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 18/366 (4%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +A+ + G+++HA + G ++ G +Y K D +++F + R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
A+W I+ G+ K AI F +++ G D +TF A L AC+ L GR +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
++V SG G + N L+ YG C V A ++F+ ++++ VSW + + Q+ +
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEK-MERDLVSWNAAIAANAQSGDLGI 211
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
++F + EGV P + L+ CA I +++H + ++ +E + V +AL
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQTLVVSTALAS 268
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PN 314
Y + G + A+ F++ ER++V WNA++G YA GH A F M E + P+
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH---EGISPS 325
Query: 315 YVTLVCVLSACS--RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
VTLV + CS R G ++ + L+ G+ ++D+ R G + A
Sbjct: 326 KVTLVNASTGCSSLRFG------RMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARH 379
Query: 373 IIKEMP 378
+ K +P
Sbjct: 380 LFKRIP 385
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 15/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + + TF + KA + L G+ +HA ++SG + +Y G
Sbjct: 119 MQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGC 178
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F++M ER+L +WNA I+ G A++ F ++ G P IT L
Sbjct: 179 VASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTV 237
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++ + +H + SG + + V L Y + + AK VFD +++ VSW
Sbjct: 238 CAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSW 294
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y Q+ +F EG+ P + + + C + L GR +H A++
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMIHGCALE 351
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ +I +G+AL+DMY +CGS ++A F ++P N V WN +I G + +G A+
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVEL 410
Query: 301 FEEMTSMRCEAV-PNYVTLV-CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ M V Y+ L+ V S A A+ +G K+ +S + G VV
Sbjct: 411 FQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL-HSRIVSCGYASEPAIGTAVV 469
Query: 359 DLLGRAGLVDRAYEIIKEMPM--RPTISVWGALLNACRV--YGKPELGRIAADNLFKLDP 414
+ G +D A + M R + W A++++ +GK LG +L + P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 415 ND 416
N
Sbjct: 530 NQ 531
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 12/282 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L A D LL GR++H +V G + + N L+ Y KC +G + VF + ++
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ SW +++ Y ++ + + MF ++EGV +VL ACAR+ L GRS+HA
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
V++ ++G + + L+ +YG CG + A + F KM ER+LV WNA I A G +
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGI 211
Query: 297 ALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F+ M+ E V P +TLV L+ C A + + + + + G++
Sbjct: 212 ALELFQR---MQLEGVRPARITLVIALTVC----ATIRQAQAIHFIVRESGLEQTLVVST 264
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ R G + +A E+ R +S W A+L A +G
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAAERDVVS-WNAMLGAYAQHG 305
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 323/598 (54%), Gaps = 45/598 (7%)
Query: 26 PVTGKQLHALALKSGQ------IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATW 79
P KQLHA LK+ + V C+ +S L +F + + W
Sbjct: 28 PFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKL------IFQLLDASEVTHW 81
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
N + + G P +AI F LR PD T L ACS ++ G+ +HG++ +
Sbjct: 82 NTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEK 141
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-------------------------- 173
G N+ + N +V Y C E+G+A+ VFD +
Sbjct: 142 LGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKL 201
Query: 174 -----DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
++N SW SM+ Y Q + + +FL G+ P + + +VL ACA + L
Sbjct: 202 FAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNL 261
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
LGR +H + ++ E NI V + L+DMY KCG ++DA F+ M ER +V W+A+I G
Sbjct: 262 VLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGL 321
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A G A+ AL+ F +M + + PN VT + +L ACS G VEKG K F SMT YGI
Sbjct: 322 AAHGRAEDALALFNKMINTGVK--PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIV 379
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
P EHY C+VDL RAGL+ A+E I MP+ P VWGALL C+V+ +L A +
Sbjct: 380 PRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRH 439
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
L KLDP + G +V+LSN++A GRWE+ VRK M+D G+KK G S I V+ ++ F A
Sbjct: 440 LSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVA 499
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGL 528
D +H + EI KL + MK GY+P+T+ L D+EE++K + HSEK+A+ FGL
Sbjct: 500 GDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGL 559
Query: 529 IAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I PG IRI KNLR+C DCH+A K IS + RE++VRD NRFH F +G CSC DYW
Sbjct: 560 IKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 168/377 (44%), Gaps = 33/377 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R ISP+ +T + KA S L GK +H K G ++F+ +Y+ G
Sbjct: 104 LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGE 163
Query: 61 KDDADKMFDEMPERNLATWNAYISNAV-LG------------------------------ 89
A K+FD+MP+R++ TWN I+ V +G
Sbjct: 164 IGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQC 223
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+ K AID F+ + G P+ +T A L AC+D L LGR++H F RSG++ N+ VC
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+D Y KC + A +FD + ++ VSW +M+ + E+ +F GV+
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEI 268
P +L AC+ + +E GR A + + I +VD++ + G +Q+A
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 269 AFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
MP N V W A++GG + +A + ++ + YV L + + R
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGR 463
Query: 328 AGAVEKGMKIFYSMTLK 344
V + K+ +K
Sbjct: 464 WEDVARVRKLMRDRGVK 480
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 332/594 (55%), Gaps = 15/594 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P+ T L AS+ G+ +HA AL+ G D+ +G + DMY++ G
Sbjct: 317 MLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGS 373
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A +F+ +P N +WN I+ + G+ K A++ F ++ G P T+ L A
Sbjct: 374 PEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Query: 121 CS----DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIID 174
+ + + GR+LH +V G+ ++ +V Y C + A F + D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492
Query: 175 KNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++DV SW +++ Q+ + F GV P +VL ACA A L G
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
VH + +E N+FV +AL MYG+CGS++ A F K+ ER++V +NA+I Y+ G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A AL F M P+ + V VLSACS G ++G +IF SM YGI P +
Sbjct: 613 LAGEALKLFWRMQQEGSR--PDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC VD+LGRAG + A E+I+ M ++PT+ VW LL ACR Y + GR+A + +L
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
DP D +V+LSN+ A G+W+EA VR EM+ G++K AG SWI +K+R+H F A D S
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRS 790
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R+ EI L +L E++ GY+PDT L V+E EK + HSE++A+A G+++
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS 850
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+C DCH+A KFIS IV +E++VRD +RFH F DG CSC DYW
Sbjct: 851 TDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 194/422 (45%), Gaps = 41/422 (9%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +A+ + G+++HA + G ++ G +Y K D +++F + R+
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
A+W I+ G+ K AI F +++ G D +TF A L AC+ L GR +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
++V SG +G + N L+ YG C V A ++F+ ++++ VSW + + Q+ + +
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFER-MERDLVSWNAAIAANAQSGDLDM 211
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
++F + EGV P + LS CA+I R++H++ ++ +E + V +AL
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVSTALAS 268
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PN 314
Y + G + A+ F++ ER++V WNA++G YA GH A F M E + P+
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH---EGIPPS 325
Query: 315 YVTLVCVLSACS--------RAGAVEKGM-------KIFYSMTLKYGIKPGAEH------ 353
VTLV + CS A A+EKG+ M + G A H
Sbjct: 326 KVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP 385
Query: 354 -----YACVVDLLGRAGLVDRAYEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIA 405
+ ++ + G + RA E+ + M M P + + LL A V PE R
Sbjct: 386 GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA--VASNPEEARAM 443
Query: 406 AD 407
A+
Sbjct: 444 AE 445
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 191/422 (45%), Gaps = 15/422 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + + TF + KA + L G+ +HA ++SG + +Y G
Sbjct: 119 MQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGC 178
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F+ M ER+L +WNA I+ G A++ F ++ G P IT L+
Sbjct: 179 VASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSV 237
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ ++ R +H + SG + + V L Y + + AK VFD +++ VSW
Sbjct: 238 CAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSW 294
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y Q+ +F EG+ P + + + C + L GR +HA A++
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFGRMIHACALE 351
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ +I +G+AL+DMY +CGS ++A F +P N V WN +I G + +G AL
Sbjct: 352 KGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALEL 410
Query: 301 FEEMTSMRCEAV-PNYVTLV-CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ M V Y+ L+ V S A A+ +G K+ +S + G VV
Sbjct: 411 FQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL-HSRIVSCGYASEPAIGTAVV 469
Query: 359 DLLGRAGLVDRAYEIIKEMPM--RPTISVWGALLNACRV--YGKPELGRIAADNLFKLDP 414
+ G +D A + M R + W A++++ +GK LG +L + P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 415 ND 416
N
Sbjct: 530 NQ 531
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/537 (40%), Positives = 310/537 (57%), Gaps = 44/537 (8%)
Query: 54 MYSK---TGLKDDADKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEP 109
MY+K G DD+ K+F++MPE N+ +W A I+ V G K AI+
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE------------ 48
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
FC ++A +C V N L+ Y + + A+ F
Sbjct: 49 ---LFCKMISASVNC-----------------------VGNSLISMYARSGRMEDARKAF 82
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + +KN VS+ +++ Y +N + E +F G+ F +S+LS A I +
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G +H +K + N + +AL+ MY +CG+I+ A FN+M +RN++ W ++I G+A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G A AL F +M + PN +T V VLSACS G + +G K F SM ++GI P
Sbjct: 203 KHGFATRALEMFHKM--LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 260
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
EHYAC+VDLLGR+GL+ A E I MP+ VW LL ACRV+G ELGR AA+ +
Sbjct: 261 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI 320
Query: 410 FKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAK 469
+ +P+D ++LLSN+ A+ G+W++ +RK MK+ + K AGCSWI V+NR+H F
Sbjct: 321 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVG 380
Query: 470 DTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI 529
+TSH + +I L +L ++K GYIPDT+F L+D+EEE+K + HSEKIA+AFGLI
Sbjct: 381 ETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLI 440
Query: 530 AIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ PIRI KNLR+CGDCH+A K+IS GRE++VRD+NRFH +G CSC+DYW
Sbjct: 441 STSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 5/304 (1%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
VG S MY+++G +DA K FD + E+NL ++NA + + + A F + TG
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
TF + L+ + + G Q+HG L++ G+ N +CN L+ Y +C + A
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
VF+ + D+N +SW SM+ + ++ +MF G +P + +VLSAC+ +
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240
Query: 227 GLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAI 284
+ G + +++ + + + + +VD+ G+ G + +A N MP + + W +
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+G G+ ++ + E + + Y+ L + ++ AG + +KI SM +
Sbjct: 301 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS---AGQWKDVVKIRKSMKER 357
Query: 345 YGIK 348
IK
Sbjct: 358 NLIK 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I + FTF L ++++ G+Q+H LK G + + + MYS+ G + A
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+EM +RN+ +W + I+ G A++ F + TG +P+ IT+ A L+ACS
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240
Query: 126 LLQLGRQ 132
++ G++
Sbjct: 241 MISEGQK 247
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/566 (39%), Positives = 331/566 (58%), Gaps = 12/566 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVL 88
+QLHAL++ +G V VG + YSK G +A ++F + E R+ +WN+ + +
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A++ ++ + G D+ T + L A ++ L G Q H L++SG+ N V
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV 277
Query: 149 CNGLVDFYGKCNEVGL-AKVVFDGIIDKNDVSWCSMLVVYVQNYEE--ENGCQMFLTARR 205
+GL+D Y KC L + VFD I + + V W +M+ Y YE+ + + F +
Sbjct: 278 GSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGY-SLYEDLSDEALECFRQLQV 336
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSIQ 264
G P D + V+SAC+ ++ GR VH +A+K + N I V +AL+ MY KCG+++
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLR 396
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA+ F+ MPE N V +N++I GYA G +L F+ M M P +T + VL+A
Sbjct: 397 DAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM--GFTPTNITFISVLAA 454
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ G VE G F M K+GI+P A H++C++DLLGRAG + A +I+ +P P
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
W ALL ACR++G EL AA+ L +LDP ++ +V+L+N+++ GR ++A VRK M+
Sbjct: 515 FWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK GCSWI V RIHIF A+DT H +IQ L ++ ++K GY P+ AL
Sbjct: 575 DRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALV 634
Query: 505 ----DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
V + E+ +GHHSEK+A++FGL++ G PI + KNLRIC DCH+A K+IS +V
Sbjct: 635 GGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVV 694
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
RE+ VRD++RFH F DG CSC YW
Sbjct: 695 KREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 217/467 (46%), Gaps = 51/467 (10%)
Query: 28 TGKQLHALALKS-----------------------------GQIHD--VFVGCSAFDMYS 56
TGK LHAL +KS HD VF + Y+
Sbjct: 26 TGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYA 85
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K + A ++FDEMP+ + ++N I+ G + A F+ +R + D T
Sbjct: 86 KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DK 175
+ AC + L RQLH V +G D VSV N L+ Y K + A+ +F + D+
Sbjct: 146 IITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
++VSW SM+V Y+Q+ E +++L G+ F ++SVL+A + L G H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGS-IQDAEIAFNKMPERNLVCWNAIIGGYA-HQGH 293
A +K+ N VGS L+D+Y KCG + D F+++ +LV WN +I GY+ ++
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+D AL F ++ + P+ +LVCV+SACS + +G ++ + + LK I
Sbjct: 324 SDEALECFRQLQVVGHR--PDDCSLVCVISACSNMSSPSQGRQV-HGLALKLDIPSNRIS 380
Query: 354 Y-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK- 411
++ + + G + A + MP T+S + +++ Y + +G + +LF+
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAG---YAQHGMG-FQSLHLFQR 435
Query: 412 -LDPNDSGNHVLLSNMFAA---TGRWEEADLVRKEMKD-VGIKKGAG 453
L+ + ++ ++ AA TGR E+ + MK GI+ AG
Sbjct: 436 MLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 8/334 (2%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT-GLKDDADKMFD 69
FT + A + + + G Q HA +KSG + VG D+YSK G D K+FD
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD 300
Query: 70 EMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
E+ +L WN IS ++ A++ F L+ G PD + ++ACS+ S
Sbjct: 301 EISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPS 360
Query: 129 LGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
GRQ+HG ++ N +SV N L+ Y KC + AK +FD + + N VS+ SM+ Y
Sbjct: 361 QGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR-SVHAVAVKACVEGN 246
Q+ +F G P + SVL+ACA +E G+ + + K +E
Sbjct: 421 AQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPE 480
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
S ++D+ G+ G + +AE +P + W+A++G G+ ++A+ + +
Sbjct: 481 AGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLL 540
Query: 306 SMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ YV L + S R A +V K M+
Sbjct: 541 QLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADK 66
P+D + C+ A S + P G+Q+H LALK + + V + MYSK G DA
Sbjct: 341 PDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD MPE N ++N+ I+ G ++ F + G P ITF + L AC+
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGR 460
Query: 127 LQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSML 184
++ G+ + + G + + ++D G+ ++ A+ + + I D W ++L
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALL 520
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L C L G+S+HA+ +K+ V + ++ + + +Y KC + A F+ + N+
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+N +I YA + + ++A F+EM P+ V+ +++A +R G + ++F
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQ------PDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 339 YSM 341
M
Sbjct: 129 LEM 131
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 329/581 (56%), Gaps = 2/581 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+SPN++ + G+Q H L LK+G +V + MYSK + DA
Sbjct: 129 VSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAM 188
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+++E+P ++ +N+ +S+ V G + ++ ++ + D +TF + C+
Sbjct: 189 GVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLK 248
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG +HG ++ S + + V + +++ YGKC + +A+ VFDG+ +N V W +++
Sbjct: 249 DLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMA 308
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
QN E +F +E V+ +F + +L+ACA ++ G +H + K+ +
Sbjct: 309 SCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKH 368
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ VG+AL++MY K G I+ A+ F+ M R+++ WNA+I G++H G AL F++M
Sbjct: 369 HVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDM- 427
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ E PNYVT VLSAC G V++G + + ++G++PG EHY C+V LL + G
Sbjct: 428 -LAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTG 486
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
++ A ++ P++ + W LLNAC V+ LGR A+ + ++DPND G + LLSN
Sbjct: 487 QLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSN 546
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A RW+ VRK M+D IKK G SWI + N HIF ++D H + + +
Sbjct: 547 IYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKE 606
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L +K GY PD L+DVE+E+K + +HSEK+A+A+GL+ +P I + KNLRI
Sbjct: 607 LLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRI 666
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCHSA + IS + R ++VRD NRFH F DG CSC DYW
Sbjct: 667 CDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 213/463 (46%), Gaps = 22/463 (4%)
Query: 1 MRRECISPND-FTFPCLFKASSALHIPVTGKQLHA-LALKSGQIHDVFVGC-SAFDMYSK 57
+R +SP+ L K S+ GK +H+ L + S + + S + Y+K
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCA 116
A +FD MPERN+ +W+A ++ +L G I ++ G P+
Sbjct: 79 VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAI 138
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+++C D ++ GRQ HG L+++GF + V N LV Y KC+ V A V++ + +
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND 198
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V++ S+L V+N G ++ + E V+ + S CA + L LG VH
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHG 258
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ + VE + +V SA+++MYGKCG A F+ + RN+V W A++ G +
Sbjct: 259 KMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEE 318
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL+ F +M ++ N T +L+AC+ A G S+ + K G +H+
Sbjct: 319 ALNLFSKMEQENVKS--NEFTYAVLLNACAGLSARRNG-----SLLHGHSEKSGFKHHVM 371
Query: 357 V----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
V +++ ++G ++ A ++ +M R I+ W A++ +G + + ++ L
Sbjct: 372 VGNALINMYAKSGDIEAAKKVFSDMMHRDIIT-WNAMICGFSHHGLGKKALLVFQDM--L 428
Query: 413 DPNDSGNHVLLSNMFAATGRW----EEADLVRKEMKDVGIKKG 451
+ N+V + + +A G E + MK G++ G
Sbjct: 429 AAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPG 471
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 3/296 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + + TF F ++L G +H L S D +V + +MY K G
Sbjct: 225 MVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGK 284
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD + RN+ W A +++ G + A++ F + + + + T+ LNA
Sbjct: 285 SLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNA 344
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ S + G LHG +SGF +V V N L++ Y K ++ AK VF ++ ++ ++W
Sbjct: 345 CAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITW 404
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ + + + +F P + VLSAC + ++ G +H +
Sbjct: 405 NAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMK 464
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG-YAHQGH 293
+ V+ + + +V + K G + +A P + ++V W ++ + HQ +
Sbjct: 465 QFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNY 520
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/510 (41%), Positives = 307/510 (60%), Gaps = 34/510 (6%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CN------ 160
PD TF + L AC+ + + G+++H F+ + G + N+ V N LVD Y K CN
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 161 -----------------------EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
V A++VFDG+++KN VSW +M+ Y +N + +
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAI 244
Query: 198 QMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
++F + EG + P D + SVLSACA + L+LG+ +H + +E +F+G+AL DM
Sbjct: 245 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 304
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCG + +A+ F++M ER+++ W+ II G A G+A+ A + F EM E PN +
Sbjct: 305 YAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLE--PNDI 362
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
+ + +L+AC+ AG V+KG++ F M YGI P EHY CVVDLL RAG +D+A +I
Sbjct: 363 SFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINS 422
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
MPM+P + VWGALL CR+Y E G + +LD N SG+ V L+N++A+ GR ++A
Sbjct: 423 MPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDA 482
Query: 437 DLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYI 496
R M+D K GCSWI + N ++ F D+SH ++ I +M+ +L+ +MK AGY
Sbjct: 483 ASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYK 542
Query: 497 PDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
P T+ +++++EEEK + HSEK+ALAFGLI G IRI KNLR+C DCH A K I
Sbjct: 543 PKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKII 602
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S IV RE++VRD +RFH F DG CSC+DYW
Sbjct: 603 SKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 149/316 (47%), Gaps = 36/316 (11%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+++TF + KA + L + G+++H K G ++FV S D+Y K G A K
Sbjct: 124 NPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQK 183
Query: 67 MFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN-----A 95
+FDEM R++ +WN IS + ++ G +N A
Sbjct: 184 LFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADA 243
Query: 96 IDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
I+ F ++ GG P+ +T + L+AC+ L LG+ +H F+ R+ + + + N L D
Sbjct: 244 IELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALAD 303
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN-GCQMFLTARREGVEPKDF 213
Y KC V AK VF + +++ +SW S++++ + Y N F +G+EP D
Sbjct: 304 MYAKCGCVLEAKGVFHEMHERDVISW-SIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDI 362
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+L+AC ++ G + + + I +VD+ + G + AE N
Sbjct: 363 SFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINS 422
Query: 273 MP-ERNLVCWNAIIGG 287
MP + N++ W A++GG
Sbjct: 423 MPMQPNVIVWGALLGG 438
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PND T + A + L GK +H ++ +F+G + DMY+K G +A
Sbjct: 256 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 315
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F EM ER++ +W+ I + G A + F + G EP+ I+F L AC+
Sbjct: 316 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 375
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L+ G + + + G + +VD + + A+ + + + + N + W ++
Sbjct: 376 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 435
Query: 184 LVVYVQNYEEENGCQMFLTARR 205
L GC+++ A R
Sbjct: 436 L----------GGCRIYKDAER 447
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
Query: 261 GSIQDAEIAFNK-MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G+++ + + FN + N+ +NA++ ++ +S F + P+ T
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
VL AC+ V +G K+ + KYG + +VDL + G A ++ EM +
Sbjct: 132 SVLKACAGLAQVLEGQKV-HCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVV 190
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEE-ADL 438
R +S W L++ G + R+ D + + N V S M + R E+ AD
Sbjct: 191 RDVVS-WNTLISGYCFSGMVDKARMVFDGMME------KNLVSWSTMISGYARNEKYADA 243
Query: 439 VR--KEMKDVG 447
+ ++M+ G
Sbjct: 244 IELFRQMQHEG 254
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 315/561 (56%), Gaps = 8/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKT--GLKDDADKMFDEMPERNLATWNAYISNAV 87
K + A +++ D F+ + + T G A ++F NL WN I
Sbjct: 24 KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL--GRQLHGFLVRSGFDGN 145
+ P AI + ++ G P+ TF L AC C LL+L G++LH +V+ G D
Sbjct: 84 ISDSPITAIALYRDMFLCGISPNSYTFGFVLKAC--CKLLRLCEGQELHSQIVKVGLDFE 141
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ NGL+ Y C + A V+FD + + + SW +M+ Y QN + ++F +
Sbjct: 142 TPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQA 201
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E V F ++SV+ C + L+LG+ VH+ K V+ ++ +G+ALV MY KCGS+ +
Sbjct: 202 ENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDN 261
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F M ER++ W+ +I GYA GH + AL F+ M R + +PN VT VLSAC
Sbjct: 262 ALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMK--RSKTIPNCVTFTSVLSAC 319
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S +G VEKG +IF +M +Y I P +HY C+VDL RAG+V A++ I+ MP+ P + +
Sbjct: 320 SHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVL 379
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W LL AC+ +G +LG + + KLDP+ N+VL+SN++A+ GRW VR MKD
Sbjct: 380 WRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKD 439
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
KK G S I + +H F D SH +I ML ++ ++K G++ T L+D
Sbjct: 440 KAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHD 499
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
++EEEK +G HSE++A+A+GL+ P G PIRI KNLR+C DCH K IS + RE+I
Sbjct: 500 IDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREII 559
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD RFH F + CSC+DYW
Sbjct: 560 VRDRVRFHHFRERGCSCNDYW 580
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 2/328 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
ISPN +TF + KA L G++LH+ +K G + + +Y+ G D A
Sbjct: 103 ISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYAC 162
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
MFDEMPE + A+W+ +S G+ A+ F ++ D T + + C D
Sbjct: 163 VMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG 222
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+ +H ++ + G +V + LV Y KC + A VF G+ +++ +W +M+
Sbjct: 223 ALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIA 282
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVE 244
Y + E Q+F +R P +SVLSAC+ +E G + + + +
Sbjct: 283 GYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKIT 342
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
I +VD++ + G + A MP E N+V W ++G G+ D+ +
Sbjct: 343 PQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRK 402
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ + + NYV + V ++ R +V
Sbjct: 403 ILKLDPSSPENYVLVSNVYASLGRWSSV 430
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E +S + FT + L GK +H+ K G DV +G + MYSK G
Sbjct: 199 MQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGS 258
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A K+F M ER++ W+ I+ + G + A+ F ++R+ P+ +TF + L+A
Sbjct: 259 LDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSA 318
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS L++ G Q+ + +VD + + VG A K + I+ N V
Sbjct: 319 CSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVV 378
Query: 179 SWCSML 184
W ++L
Sbjct: 379 LWRTLL 384
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/615 (37%), Positives = 328/615 (53%), Gaps = 40/615 (6%)
Query: 8 PNDFTFPCLFKA----SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
P+ +TFP L KA + + +HA ++ G + V S Y+ G
Sbjct: 17 PDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAA 76
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A + E WNA IS GGR + +F+++ R G P +T+ + L+AC
Sbjct: 77 ARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGK 134
Query: 124 CSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--------- 173
+ + LG Q+HG +V SG ++ V N LVD Y +C ++G A VFDG+
Sbjct: 135 GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTS 194
Query: 174 ----------------------DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
+++ VSW +M+ YV +MF + V
Sbjct: 195 LLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSAD 254
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+F + SV++ACA++ LE+G V + ++ + FVG+AL+DMY KCGSI+ A F
Sbjct: 255 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFK 314
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
M R+ W AII G A G+ + A+ F M +R P+ VT + VL+AC+ AG V
Sbjct: 315 GMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRM--IRVSETPDEVTFIGVLTACTHAGLV 372
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+KG + F SM Y I P HY C++DLLGRAG + A + I +MPM P ++WG LL
Sbjct: 373 DKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLA 432
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
ACRV+G E+G + A+ L +LDP +S ++LLSN++A RWE+ +R + + GIKK
Sbjct: 433 ACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKE 492
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
GCS I + IH F A D SH + EI + L + ++ GY PD +V E+EK
Sbjct: 493 PGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEK 552
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSEK+A+AF L++ P IRI KNLR+C DCH+A K IS + GREV+VRD R
Sbjct: 553 KKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTR 612
Query: 572 FHRFWDGYCSCSDYW 586
FH F G+CSC DYW
Sbjct: 613 FHHFRHGFCSCKDYW 627
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 149/344 (43%), Gaps = 42/344 (12%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCS----LLQLGRQLHGFLVRSGFDGNVSV 148
++A+ + + GG PD TF A L A + + R +H +VR G N V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV Y + A+ + G D V+W +++ + + C F+ R G
Sbjct: 61 ASSLVAAYTAGGDGAAARALV-GECD-TPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 209 EPKDFMISSVLSACAR-IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC------- 260
P SVLSAC + + LG VH V + V ++ V +ALVDMY +C
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178
Query: 261 ------------------------GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
G + +A F++MPER+ V W A+I GY
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F EM A + T+V V++AC++ GA+E G + M+ + GIK A
Sbjct: 239 ALEMFREMQYSNVSA--DEFTMVSVITACAQLGALEMGEWVRVYMS-RQGIKMDAFVGNA 295
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G ++RA ++ K M R + W A++ V G E
Sbjct: 296 LIDMYSKCGSIERALDVFKGMHHRDKFT-WTAIILGLAVNGYEE 338
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +S ++FT + A + L G+ + + G D FVG + DMYSK G
Sbjct: 246 MQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGS 305
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F M R+ TW A I + G + AI+ F + R PD +TF L A
Sbjct: 306 IERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTA 365
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
C+ L+ GR+ ++ + NV ++D G+ ++ A D + + N
Sbjct: 366 CTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNST 425
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
W ++L + E G + R ++P++ M+ +LS
Sbjct: 426 IWGTLLAACRVHGNSEIG--ELVAERLLELDPENSMVYILLS 465
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 331/586 (56%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P T+ L + + + G LH + G D F+ +MYS+ D+A K
Sbjct: 75 NPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARK 134
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC----S 122
+FD+ +R + WNA L G + +D + + R G D T+ L AC +
Sbjct: 135 VFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEA 194
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
SLL GR++HG ++R GF+G+V + L+D Y + V A VFD + KN VSW +
Sbjct: 195 FVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSA 254
Query: 183 MLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N + ++F + + + P + SVL ACA +A LE G+ +H ++
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V SALV +Y +CG+++ F +M +R++V WN++I Y G A+
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQI 374
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM P ++ V VL ACS AG VE+G +F SM + I P EHYAC+VDL
Sbjct: 375 FKEMIDQGLSPSP--ISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDL 432
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA +D A +II +M + P VWG+LL +CR++ EL A LF+L+P ++GN+
Sbjct: 433 LGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNY 492
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL++++A W E V+ ++ G++K G S I ++ +I+ F + D + + ++
Sbjct: 493 VLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLH 552
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL EMK GY+PDT LYD++ EEK V HSEK+ALAFGLI G IRIT
Sbjct: 553 ALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRIT 612
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHS KFIS RE++VRD NRFH F DG CSC DYW
Sbjct: 613 KNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+Q+ ++ L + P ++ +C R L G +H + + +
Sbjct: 54 IQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDP 113
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+ + L++MY + SI +A F+K +R + WNA+ G+ L + M +
Sbjct: 114 FLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRI 173
Query: 308 RCEAVP-NYVTLVCVLSACSRAGA----VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
VP + T VL AC + A + G +I + L++G + ++D+
Sbjct: 174 ---GVPSDRFTYTYVLKACVASEAFVSLLLNGREI-HGHILRHGFEGHVHIMTTLLDMYA 229
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
R G V A + +MP++ +S W A++ GKP
Sbjct: 230 RFGCVLNASRVFDQMPVKNVVS-WSAMIACYSKNGKP 265
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 330/565 (58%), Gaps = 10/565 (1%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+QLH LAL+SG D + + MY DA + FDE+P N A S +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 88 LGGRPKNAIDAFINLRRTG--GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ F ++ +G G D L+A + + +H + + G DG
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 146 VSVCNGLVDFYGKC--NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
V N ++D Y K +++G A+ +FD ++D++ VSW +M+ +Y QN ++
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285
Query: 204 RREG--VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
G V +S+VL ACA ++ G+ +H V+ +E N++VG+++VDMY KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
++ A AF K+ +N++ W+A+I GY G+ AL F +M + PNY+T + V
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLK--PNYITFITV 403
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L+ACS AG + +G + +M ++GI+PG EHY C+VDLLGRAG +D AY +IKEM ++P
Sbjct: 404 LAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 463
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
++WGALL+ACR+Y EL +I A+ LF+LD +SG +VLLSN++A G W+E + +R
Sbjct: 464 DAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRV 523
Query: 442 EMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNF 501
+K GI+K G S + +K + H+F D SH + EI A L KL E + AGY+P+T
Sbjct: 524 LVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGS 583
Query: 502 ALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVG 561
L+D++ EE+ + + HSEK+A+AF L+ G I + KNLR+C DCH+A K I+ + G
Sbjct: 584 VLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTG 643
Query: 562 REVIVRDNNRFHRFWDGYCSCSDYW 586
RE+I+RD RFH F DG CSC DYW
Sbjct: 644 REIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 329/576 (57%), Gaps = 4/576 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L A L K+L + +G D ++ M+ K G+ DA ++FDEM
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
P RN +W IS V G A FI +R + TF + A + ++ GR
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
QLH +++G ++ V L+D Y KC + A VFD + DK V W S++ Y +
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E ++ R GV+ F S ++ C+R+A + + VHA V+ ++ +
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANT 373
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD Y K G + DA F++M RN++ WNA+I GY + GH + A+ FE+M +R
Sbjct: 374 ALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKM--LREGM 431
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
+PN+VT + VLSACS +G E+G +IF SMT + +KP A H+AC+++LLGR GL+D AY
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAY 491
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+I++ P +PT ++W ALL ACRV+G ELG+ AA+ L+ ++P N+++L N++ ++G
Sbjct: 492 ALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSG 551
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+ +EA V + +K G++ CSWI V N+ H F + D H + ++ + +L +
Sbjct: 552 KLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNIS 611
Query: 492 AAGYIPD-TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
GY+P+ NF L DV+E E+ + +HSEK+A+A+GL+ P++I ++ RIC DCH
Sbjct: 612 KLGYVPEEQNFMLPDVDENEEKIRM-YHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCH 670
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S K I+ I RE+++RD +RFH F DG CSC DYW
Sbjct: 671 SVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 177/346 (51%), Gaps = 5/346 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E TF + +AS+ L I G+QLH+ A+K+G D+FV C+ DMYSK G
Sbjct: 224 MREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGS 283
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FDEMP++ + WN+ I+ L G + A+D + +R +G + D TF +
Sbjct: 284 LEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRI 343
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + + +Q+H LVR+GF +V LVDFY K +V A+ VFD + +N +SW
Sbjct: 344 CSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISW 403
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAV 239
+++ Y + E MF REG+ P +VLSAC+ E G + ++
Sbjct: 404 NALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTR 463
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
V+ + ++++ G+ G + +A K P + W A++ G+ ++
Sbjct: 464 DHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGK 523
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ E++ M E + NY+ L+ + ++ +G +++ +F ++ K
Sbjct: 524 FAAEKLYGMEPEKLSNYIVLLNIYNS---SGKLKEAADVFQTLKRK 566
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 339/586 (57%), Gaps = 8/586 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P T+ L + + + + +++H L++G D F+ +MYS D+A K
Sbjct: 67 NPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARK 126
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDC 124
+FD+ R + +NA L G + ++ + + G D T+ L AC S+C
Sbjct: 127 VFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASEC 186
Query: 125 --SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
SLL GR++H ++R G+DG V + LVD Y K V A VF+ + KN VSW +
Sbjct: 187 FVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSA 246
Query: 183 MLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+ Y +N + ++F L + + P + SVL ACA +A LE GR +H ++
Sbjct: 247 MIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR 306
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ + V SALV MY +CG ++ + F++M +R++V WN++I Y G A+
Sbjct: 307 KGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGI 366
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEMT E P+ ++ V VL ACS AG V++G +F SM + +GI P EHYAC+VDL
Sbjct: 367 FEEMTYNGVE--PSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDL 424
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRA ++ A +II+ M + P VWG+LL +CR++ EL A+ LF L+P ++GN+
Sbjct: 425 LGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNY 484
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLL++++A G W+ V+K ++ G++K G SWI VK +I+ F + D + R ++
Sbjct: 485 VLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLH 544
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
A+L KL E+K GY+P T LYD++ EK V HSEK+A+AFGLI G IRIT
Sbjct: 545 ALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRIT 604
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K+LR+C DCHS KFIS +E++VRD NRFH F DG CSC DYW
Sbjct: 605 KSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T + +A +AL G+ +H L+ G + V + MY++ G +
Sbjct: 274 LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ 333
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++FD+M +R++ +WN+ IS+ + G K AI F + G EP I+F + L ACS
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAG 393
Query: 126 LLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEV-GLAKVVFDGIIDKNDVSWCSM 183
L+ G+ L + V G +V +VD G+ N + AK++ + I+ W S+
Sbjct: 394 LVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSL 453
Query: 184 L 184
L
Sbjct: 454 L 454
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 325/558 (58%), Gaps = 3/558 (0%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+HA +K+ V++ +Y + G DDA + D MPERN+ +W A IS
Sbjct: 60 GRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQ 119
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR A++ FI + R G + + T L +C +Q Q+H +V++ F+ ++ V
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFV 179
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ L+D YGK + A+ VFD + +++ VS +++ Y Q ++ +F G+
Sbjct: 180 GSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM 239
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ +++L++ + +A L G+ VH + ++ + I + ++L+DMY KCG + +
Sbjct: 240 QCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRR 299
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ MP+R+ + WNA++ GY G + F MT E P+ VTL+ VLS CS
Sbjct: 300 VFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE---EVKPDSVTLLAVLSGCSHG 356
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G+ IF + + HY CV+DLLGR+G + +A ++I+ MP PT ++WG+
Sbjct: 357 GLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGS 416
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACRV+ +G + A L ++P ++GN+V+LSN++AA G W++ VRK M + +
Sbjct: 417 LLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTV 476
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K SWI + IH F + + H R +I A + ++ ++KAAG++PD + L+DV++
Sbjct: 477 TKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDD 536
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E+K + HSEK+A+ FGL+ PPG+ I++ KNLRIC DCH+ KF+S + GRE+ +RD
Sbjct: 537 EQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRD 596
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH DG C+C DYW
Sbjct: 597 KNRFHLLKDGACTCGDYW 614
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 159/300 (53%), Gaps = 11/300 (3%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G + + A + AC + L GRQ+H +V++ + V + L+ Y +C + A
Sbjct: 36 GADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDA 95
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+ V DG+ ++N VSW +M+ Y Q+ ++F+ R G + +F +++VL++C
Sbjct: 96 RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
++ VH++ VK E ++FVGS+L+DMYGK G+IQ+A F+ +PER+ V AII
Sbjct: 156 QSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAII 215
Query: 286 GGYAHQGHADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
GYA G D AL F ++ S M+C NYVT +L++ S ++ G ++ + + L
Sbjct: 216 SGYAQLGLDDEALDLFRQLYSSGMQC----NYVTFTTLLTSLSGLASLNYGKQV-HGLIL 270
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+ + ++D+ + G + + + MP R IS W A+L YG+ +G+
Sbjct: 271 RKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAIS-WNAMLMG---YGRHGIGQ 326
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N TF L + S L GKQ+H L L+ + + S DMYSK G + ++F
Sbjct: 242 NYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVF 301
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAI-DAFINLRRTGGE---PDLITFCAFLNACSDC 124
D MP+R+ +W NA+L G ++ I + L RT E PD +T A L+ CS
Sbjct: 302 DNMPQRSAISW-----NAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHG 356
Query: 125 SLLQLGRQLHGFLVR 139
L+ G + +V+
Sbjct: 357 GLVDEGLDIFDLIVK 371
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/611 (36%), Positives = 333/611 (54%), Gaps = 60/611 (9%)
Query: 31 QLHALALKSGQIHDVFVG------CSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
Q+HA+ +KSGQ+ D C+ D++ + D A K+F++MP+RN +WN I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 85 NAVLGGRPKN--AIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
K AI F + EP+ TF + L AC+ +Q G+Q+HG ++ G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 142 F---------------------------------------------DGNVSVCNGLVDFY 156
F DG + + N ++D Y
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
+ + A+++FD + ++ VSW +M+ Y N ++ ++F ++ + P +
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
SVL A +R+ LELG +H A + + + +GSAL+DMY KCG I+ A F ++P
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGM 335
N++ W+A+I G+A G A A+ F MR V P+ V + +L+ACS G VE+G
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCF---CKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+ F M G++P EHY C+VDLLGR+GL+D A E I MP++P +W ALL ACR+
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
G E+G+ A+ L + P+DSG +V LSNM+A+ G W E +R MK+ I+K GCS
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
I + +H F +D SH + EI +ML ++ ++++ AGY P T L ++EEE+K +
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVL 575
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
+HSEKIA AFGLI+ PG PIRI KNLRIC DCHS+ K IS + R++ VRD RFH F
Sbjct: 576 HYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHF 635
Query: 576 WDGYCSCSDYW 586
DG CSC DYW
Sbjct: 636 QDGSCSCMDYW 646
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 152/344 (44%), Gaps = 47/344 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN FTFP + KA + GKQ+H LALK G D FV + MY G
Sbjct: 119 MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGF 178
Query: 61 KDDA-----------------DK----------------------------MFDEMPERN 75
DA D+ +FD+M +R+
Sbjct: 179 MKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 238
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+ +WN IS L G K+A++ F +++ P+ +T + L A S L+LG LH
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL 298
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
+ SG + + + L+D Y KC + A VF+ + +N ++W +M+ + + + +
Sbjct: 299 YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGD 358
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALV 254
F R+ GV P D ++L+AC+ +E GR + V +E I +V
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV 418
Query: 255 DMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMA 297
D+ G+ G + +AE MP + + V W A++G QG+ +M
Sbjct: 419 DLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 56/329 (17%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN----EVGLAKVVFDGIIDKND 177
++C ++ Q+H ++SG + ++ F + ++ A +F+ + +N
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 178 VSWCSMLVVYVQNYEEENGCQMFL---TARREGVEPKDFMISSVLSACARIAGLELGRSV 234
SW +++ + ++ E++ + L E VEP F SVL ACA+ ++ G+ +
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI-------------------------- 268
H +A+K G+ FV S LV MY CG ++DA +
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 269 -------------------AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
F+KM +R++V WN +I GY+ G A+ F EM +
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK--KG 268
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ PNYVTLV VL A SR G++E G + + GI+ + ++D+ + G++++
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGK 398
A + + +P R + W A++N ++G+
Sbjct: 328 AIHVFERLP-RENVITWSAMINGFAIHGQ 355
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/532 (38%), Positives = 318/532 (59%), Gaps = 10/532 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + + A F++MP ++ +WN I+ + A D F+ + +++T+
Sbjct: 48 YVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTK----NVVTW 103
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A ++ +C L +L ++ F +V ++ Y K +GLA+ +F+ + +
Sbjct: 104 NAMISGYVECGDLDSALKL---FEKAPFK-SVVAWTAMITGYMKLGRIGLAERLFEKMPE 159
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
KN V+W +M+ Y++N+ E+G ++F T G++P +SS L C+ ++ L+LGR V
Sbjct: 160 KNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQV 219
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H + K+ + + G++L+ MY KCG ++D F ++P R++V WNA+I GYA G
Sbjct: 220 HQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEG 279
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F+EM + P+++T V VL AC+ AG + G+K F+SM YG+ +HY
Sbjct: 280 KKALGLFDEMIEKGMK--PDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHY 337
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VDLLGRAG + A ++I++MP +P +V+G LL ACR++ E+ A+ L LDP
Sbjct: 338 TCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDP 397
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+ +V L+N++AAT RW+ VRK MK + K G SWI VK+ H F++ D H
Sbjct: 398 ASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHP 457
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
I L +L ++MK AGY+PD FAL+DV EE+K + HSEK+A+A+GLI +PPG
Sbjct: 458 ELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPG 517
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIR+ KNLR+CGDCH A K+IS I RE+IVRD RFH F DG+CSC+DYW
Sbjct: 518 TPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN T S L G+Q+H L KS D G S MY K G+ +D
Sbjct: 193 IQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGW 252
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F ++P R++ TWNA IS G K A+ F + G +PD ITF A L AC+
Sbjct: 253 KLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAG 312
Query: 126 LLQLG-RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV 162
LG + H G +VD G+ ++
Sbjct: 313 FTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKL 350
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 12/249 (4%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N ++ Y + + + A+ F+ + K+ SW +M+ + QN + + +FL + V
Sbjct: 42 NTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVV 101
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ MIS + + L+L +V A +A++ Y K G I AE
Sbjct: 102 TWNAMISGYVECGDLDSALKLFEKAPFKSVVAW--------TAMITGYMKLGRIGLAERL 153
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F KMPE+NLV WNA+I GY A+ + F M + PN TL L CS
Sbjct: 154 FEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQ--PNSSTLSSALLGCSELS 211
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A++ G ++ + + K + ++ + + G+++ +++ ++P R ++ W A+
Sbjct: 212 ALQLGRQV-HQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVT-WNAM 269
Query: 390 LNACRVYGK 398
++ +G+
Sbjct: 270 ISGYAQHGE 278
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
S L M K G +++A+ F K+PE + V +N ++ Y + + A + FE+M +
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMP---IK 67
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P++ T++ + ++ ++K +F M K + + ++ G +D A
Sbjct: 68 DTPSWNTMI---TGFAQNQQMDKARDLFLIMPTKNVVT-----WNAMISGYVECGDLDSA 119
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDPNDSGNHVLLSNMFAA 429
++ ++ P + ++ W A++ G +LGRI A+ LF+ P N V + M A
Sbjct: 120 LKLFEKAPFKSVVA-WTAMIT-----GYMKLGRIGLAERLFEKMPEK--NLVTWNAMIAG 171
Query: 430 ---TGRWEEADLVRKEMKDVGIKKGA--------GCSWIS 458
R E+ + + M GI+ + GCS +S
Sbjct: 172 YIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELS 211
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/568 (38%), Positives = 318/568 (55%), Gaps = 37/568 (6%)
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD 110
AF +G A +F+++P T N+ I P+ AI + + G +PD
Sbjct: 18 AFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPD 77
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
TF + +C +L G+QLH + GF + + N L++ Y C + A+ VFD
Sbjct: 78 RFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD 134
Query: 171 GIIDKNDVSWCSMLVVY--------------------------------VQNYEEENGCQ 198
+++K+ VSW +M+ Y V++ + E
Sbjct: 135 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALS 194
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+F + GV+ ++S+L AC + LELG+ +H K +E ++ +G+ALVDMY
Sbjct: 195 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 254
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCGSI+ A F +MPE++++ W A+I G A G AL F EM E P+ +T
Sbjct: 255 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQ--MSEVKPDAITF 312
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V VL+ACS AG V +G+ F SM KYGI+P EHY C+VD+LGRAG + A ++I+ MP
Sbjct: 313 VGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
M P V LL+ACR++G + AA L +LDP + G +VLLSN++++ WE A
Sbjct: 373 MAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKK 432
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+R+ M + IKK GCS I V +H F D SH +++EI L + +K+AGY+PD
Sbjct: 433 MRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPD 492
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
+ L+D++E+EK E+ HSEK+A+AFGL++ PG PIR+ KNLR+C DCHSA KFIS
Sbjct: 493 KSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISE 552
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ RE+IVRD NRFH F G CSC D+W
Sbjct: 553 VYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 36/307 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ FTFP LFK+ L GKQLH + K G D ++ + +MYS G
Sbjct: 69 MMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125
Query: 61 KDDADKMFDEMPER--------------------------------NLATWNAYISNAVL 88
A K+FD+M + NL WN I+ V
Sbjct: 126 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVE 185
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ A+ F ++ +G + D +T + L AC+ L+LG+ LH ++ + + +V++
Sbjct: 186 DSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 245
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
LVD Y KC + A VF + +K+ ++W +++V + ++F + V
Sbjct: 246 GTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 305
Query: 209 EPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P VL+AC+ + G + +++ K ++ +I +VDM G+ G I +AE
Sbjct: 306 KPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE 365
Query: 268 IAFNKMP 274
MP
Sbjct: 366 DLIQNMP 372
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 326/607 (53%), Gaps = 52/607 (8%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDEMPERNLATWNAYISNAV 87
KQ+H+ +K+G I + + D A ++FD +PE ++ +WN
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
PK + ++ + +PD T+ + LQLGR+LH +V+ G D NV
Sbjct: 91 RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVF 150
Query: 148 VCNGLVDFYGKCNEVGLAKVVFD------------------------------------- 170
N L++ Y C + +A+ +FD
Sbjct: 151 AHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNT 210
Query: 171 GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
G +D ++ VSW +M+ Y++ + +F + ++P +F + SVL
Sbjct: 211 GQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVL 270
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
+ACA++ LELG + K V+ + FVG+AL+DMY KCG+++ A FN +P+R+
Sbjct: 271 TACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKF 330
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W A++ G A G + AL+ F +M ++ P+ VT V VLSAC+ G V++G K F
Sbjct: 331 TWTAMVVGLAINGCGEEALNMFSQM--LKASVTPDEVTYVGVLSACTHTGMVDEGKKFFA 388
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
SMT ++GI+P HY C+VDLLG+AG + A+EIIK MPM+P VWGALL ACR++
Sbjct: 389 SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDA 448
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
E+ A + + +L+PN+ +VL N++AA +W++ +R+ M D GIKK GCS I +
Sbjct: 449 EMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEM 508
Query: 460 KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHS 519
+H F A D SH + EI L K+ ++K AGY P+T+ D+ EE+K V HS
Sbjct: 509 NGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHS 568
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+AFGLI PGV IRI KNLR+C DCH K +S + REVIVRD RFH F G
Sbjct: 569 EKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGS 628
Query: 580 CSCSDYW 586
CSC DYW
Sbjct: 629 CSCKDYW 635
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 159/380 (41%), Gaps = 56/380 (14%)
Query: 1 MRRECISPNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS- 56
M + P+ +T+P LFK S AL + G++LH +K G +VF + +MYS
Sbjct: 105 MLERNVKPDCYTYPFLFKGFTRSVALQL---GRELHCHVVKYGLDSNVFAHNALINMYSL 161
Query: 57 -----------------------------------------------KTGLKDDADKMFD 69
TG D A K F
Sbjct: 162 CGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFH 221
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+MPER+ +W A I + K A+ F ++ + +PD T + L AC+ L+L
Sbjct: 222 KMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALEL 281
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G + ++ ++ + V N L+D Y KC V +A +F+ + ++ +W +M+V
Sbjct: 282 GEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAI 341
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIF 248
N E MF + V P + VLSAC ++ G+ A + + +E NI
Sbjct: 342 NGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIA 401
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+VD+ GK G +++A MP + N + W A++G A+MA + E++ +
Sbjct: 402 HYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILEL 461
Query: 308 RCEAVPNYVTLVCVLSACSR 327
YV + +AC++
Sbjct: 462 EPNNGAVYVLQCNIYAACNK 481
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 53/328 (16%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF--YGKCNEVGLAKVVFDGIIDK 175
L+ C + +Q+H +++G N + N ++ F + ++ A+ +FD I +
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEP 77
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ SW M Y + + G ++L V+P + + R L+LGR +H
Sbjct: 78 SVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELH 137
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY------- 288
VK ++ N+F +AL++MY CG I A F+ + ++V WNA+I GY
Sbjct: 138 CHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDV 197
Query: 289 ----------AHQGHADMALSSFEEMTS---------------MRC--EAV--------- 312
+ G D A F +M + C EA+
Sbjct: 198 ISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 313 ---PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ T+V VL+AC++ GA+E G I + K +K ++D+ + G V+
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEWI-RTYIDKNKVKNDTFVGNALIDMYFKCGNVEM 316
Query: 370 AYEIIKEMPMRP----TISVWGALLNAC 393
A I +P R T V G +N C
Sbjct: 317 ALSIFNTLPQRDKFTWTAMVVGLAINGC 344
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/481 (41%), Positives = 296/481 (61%), Gaps = 6/481 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
P +F L +C+ QLG H +++ GF+ ++ + GL+DFY K V A+ +
Sbjct: 28 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNL 87
Query: 169 FDGIIDKND--VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
FD + ++N V+W +M+ YVQ E MF + E V+P + + S+LSACA +
Sbjct: 88 FDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLG 147
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
L++G +H ++ ++ +G+AL+DMY KCG+++ A F+ + +N+ CWN+II
Sbjct: 148 ALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIV 207
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
G G + A+++F M E + P+ VT V +LS CS +G + G + F M Y
Sbjct: 208 GLGMNGRGEEAIAAF---IVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVY 264
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G++PG EHY C+VDLLGRAG + A E+I+ MPM+P V G+LL AC+++ +LG
Sbjct: 265 GLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQV 324
Query: 406 ADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHI 465
L +LDP D GN+V LSN++A+ RW++ + RK M G+ K GCS I V N +H
Sbjct: 325 TQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHE 384
Query: 466 FQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALA 525
F A DTSH + T+I A L ++ +E+K G++P+T L+D+EEEEK + +HSE+IA+A
Sbjct: 385 FVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVA 444
Query: 526 FGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
FGL++ PPG IR+ KNLR C DCHSA K IS RE+IVRD RFH F +G CSC+DY
Sbjct: 445 FGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDY 504
Query: 586 W 586
W
Sbjct: 505 W 505
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ +F + ++ + G+ H +K G +D+ + D Y+K G
Sbjct: 21 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGY 80
Query: 61 KDDADKMFDEMPERNL--ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
++A +FD M ERN TWN IS V G AI F ++ +P +T + L
Sbjct: 81 VEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLL 140
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+AC+ L +G +HG++ +V + N L+D Y KC + A VF G+ KN
Sbjct: 141 SACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIF 200
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
W S++V N E F+ +EG++P +LS C+ L G+ +
Sbjct: 201 CWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEM 260
Query: 239 VKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG---YAHQGHA 294
+ +E + +VD+ G+ G +++A MP + N+++ G A Q H
Sbjct: 261 LGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLGSLLRACQIHK 316
Query: 295 DMALSSFEEMTSMRCEAVP----NYVTLVCVLSACSR 327
D L E++T E P NYV L + ++ SR
Sbjct: 317 DTKLG--EQVTQQLLELDPCDGGNYVFLSNLYASLSR 351
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/613 (37%), Positives = 338/613 (55%), Gaps = 36/613 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDA 64
I P+ T C+ A + L G+++ A + G +++ V V + DMY K G D A
Sbjct: 228 IRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN-ALVDMYMKCGAIDAA 286
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
++FDE +RNL +N +SN G + A+ + + G PD +T + ++A +
Sbjct: 287 KRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQL 346
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L G+ HG+++R+G +G S+ N ++D Y KC + +A VFD + +K VSW S+
Sbjct: 347 VDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLT 406
Query: 185 VVYVQNYEEE-------------------------------NGCQMFLTARREGVEPKDF 213
+++N + E + ++F + EG++
Sbjct: 407 AGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRV 466
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ + SAC + EL + VH K + ++ + +ALVDM+ +CG Q A FNKM
Sbjct: 467 TMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM 526
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
ER++ W A IG A +G+ + A F +M + P+ V V VL+ACS G VE+
Sbjct: 527 TERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK--PDVVLFVQVLTACSHGGQVEQ 584
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G+ IF S+ +GI P EHY C+VDLLGRAGL+ A+++IK MPM P VWG+LL AC
Sbjct: 585 GLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAAC 643
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
RV+ E+ AA+ + +L P +G HVLLSN++A+ G+W + VR +++ G++K G
Sbjct: 644 RVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPG 703
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
S + V IH F + D SH T I ML ++ AG+IPD + L DV+E+EK
Sbjct: 704 SSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEY 763
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ HSEK+A+AFGLIA +PIR+ KNLR+C DCHS K S I RE+IVRDNNRFH
Sbjct: 764 LLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFH 823
Query: 574 RFWDGYCSCSDYW 586
F G CSC DYW
Sbjct: 824 FFRQGLCSCCDYW 836
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 188/426 (44%), Gaps = 35/426 (8%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PN +TFP + + + G Q+H +K G DVF+ Y++ G D
Sbjct: 127 VTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGH 186
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F+ M ERN+ +W + I G RPK A+ F + G P +T ++AC+
Sbjct: 187 KVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLR 246
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +G ++ ++ G N + N LVD Y KC + AK +FD +D+N V + ++L
Sbjct: 247 DLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILS 306
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + ++G P + S +SA A++ L G+ H ++ +EG
Sbjct: 307 NYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEG 366
Query: 246 NIFVGSALVDMYGKCGS-------------------------------IQDAEIAFNKMP 274
+G+ ++DMY KCG ++ A FN++P
Sbjct: 367 WDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP 426
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
ERN V WN +I G + + A+ F EM +A + VT++ + SAC GA E
Sbjct: 427 ERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKA--DRVTMMGIASACGYLGAPELA 484
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
K ++ K GI +VD+ R G A ++ +M R +S W A +
Sbjct: 485 -KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER-DVSAWTAAIGTMA 542
Query: 395 VYGKPE 400
+ G E
Sbjct: 543 MEGNGE 548
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 194/402 (48%), Gaps = 24/402 (5%)
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPD 110
AF+++ + DDA L N+ I G + AI ++ + G P+
Sbjct: 82 AFELFKEDVRSDDA-----------LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPN 130
Query: 111 LITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD 170
TF L+ C+ + G Q+HG +V+ G + +V + N L+ FY +C + VF+
Sbjct: 131 HYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFE 190
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
G+ ++N VSW S++ Y + + +F G+ P + V+SACA++ L++
Sbjct: 191 GMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDM 250
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
G V A + ++ N + +ALVDMY KCG+I A+ F++ +RNLV +N I+ YA
Sbjct: 251 GERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR 310
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
QG A AL+ +EM ++ P+ VT++ +SA ++ + G K+ + ++ G++
Sbjct: 311 QGLAREALAILDEM--LQQGPRPDRVTMLSAISASAQLVDLFYG-KVCHGYVIRNGLEGW 367
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
++D+ + G + A + M + +S W +L G E +A +F
Sbjct: 368 DSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS-WNSLTAGFIRNGDVE----SAWEVF 422
Query: 411 KLDPNDSGNHVLLSNMFAATGR---WEEADLVRKEMKDVGIK 449
P N V + M + + +E+A + +EM+ GIK
Sbjct: 423 NQIPER--NAVFWNTMISGLVQKSLFEDAIELFREMQGEGIK 462
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I + T + A L P K +H K+G D+ + + DM+++ G
Sbjct: 456 MQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGD 515
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F++M ER+++ W A I + G + A F + G +PD++ F L A
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKN 176
CS ++ G + + G + +VD G+ GL + FD I ++ N
Sbjct: 576 CSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGR---AGLLREAFDLIKSMPMEPN 632
Query: 177 DVSWCSML 184
DV W S+L
Sbjct: 633 DVVWGSLL 640
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/585 (37%), Positives = 324/585 (55%), Gaps = 4/585 (0%)
Query: 5 CISP-NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
C SP N + + ++ G+QLHA L SG D + D+Y+ G
Sbjct: 62 CPSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSL 121
Query: 64 ADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
A ++FDEMP + N+ WN I G + AI+ + + G +PD T+ L AC
Sbjct: 122 ARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKAC 181
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ L GR++H ++R+ + +V VC GL+D Y KC + A VF+ ++ W
Sbjct: 182 AALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWN 241
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ QN + EG+ P + S +SA A + L GR +H +
Sbjct: 242 SMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRR 301
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ ++L+DMY K G + A + F ++ R L+ WNA+I G+ GHAD A F
Sbjct: 302 GFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELF 361
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M S + +P+++T V VLSAC+ G V++ ++F M Y IKP +HY C+VD+L
Sbjct: 362 SRMRS-EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVL 420
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
G +G A ++IK M ++P +WGALLN C+++ EL +A L +L+P D+GN+V
Sbjct: 421 GHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYV 480
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN++A +G+WEEA VRK M + G+KK CSWI +K + H F D SH R+ +I
Sbjct: 481 LLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYE 540
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +L + GY+PDT ++VE++EK V HSE++A+AFGLI+ PP + +TK
Sbjct: 541 ELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTK 600
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCH K IS I RE+I+RD NR+H F +G CSC D+W
Sbjct: 601 NLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/616 (35%), Positives = 348/616 (56%), Gaps = 39/616 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F + KA +A V K++H A++ G D+ +G + DM+ K + A
Sbjct: 73 VRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGAR 132
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+M +++ +W + V G + I F + G + +T + L AC+D
Sbjct: 133 CVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD-- 190
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
++LGR++HGF++R+ +GNV V + LV+ Y + A++VFD + ++ VSW ML
Sbjct: 191 YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLT 250
Query: 186 VYVQNYEEENGCQMFLTARREGVE-----------------------------------P 210
Y N E E G +F R+EG++ P
Sbjct: 251 AYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKP 310
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
I S L C + L G+ +H + ++ + +ALV +Y KCG ++ + F
Sbjct: 311 NRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVF 370
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N MP +++V WN +I + G +L F +M E PN VT + VLS CS +
Sbjct: 371 NTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVE--PNSVTFIGVLSGCSHSQL 428
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++G+ +F SM+ ++ I P A+HY+C+VD+L RAG ++ AY+ I++MP+ PT + WGALL
Sbjct: 429 ADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALL 488
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACRVY ELG +AA LF+++P+++GN+VLLSN+ +W EA +RK M+D G+ K
Sbjct: 489 GACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAK 548
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
G SW+ VKN+++ F D S+E+ I L ++ E+M+ GY P+T+F L +V++E+
Sbjct: 549 TPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQ 608
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
+ + HSE++A+AFG++ +R+ KNLRICGDCH+A K I+ IVG ++IVRD+
Sbjct: 609 REETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSL 668
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F DGYC+C+D+W
Sbjct: 669 RFHHFRDGYCTCNDFW 684
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 43/368 (11%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD++PE +L TW IS G PK AID + L PD + AC+
Sbjct: 33 LFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGD 92
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L + +++H ++ GF+ ++ + N L+D +GKC V A+ VFD ++ K+ VSW SM
Sbjct: 93 LVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYC 152
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YV G +F G+ +SS+L ACA ++LGR VH ++ +EGN
Sbjct: 153 YVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGN 210
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
++V SALV+MY ++ A + F+ M R++V WN ++ Y + L F +
Sbjct: 211 VYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQ--- 267
Query: 307 MRCEAV------------------------------------PNYVTLVCVLSACSRAGA 330
MR E + PN +T+V L C+ +
Sbjct: 268 MRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLES 327
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +I + ++ +V L + G ++ + + MP R + W ++
Sbjct: 328 LRGGKEI-HGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP-RKDVVAWNTMI 385
Query: 391 NACRVYGK 398
A ++GK
Sbjct: 386 MANSMHGK 393
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A +FD I + + +W ++ + Q+ + ++ T V P F++ SV ACA
Sbjct: 30 ALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAA 89
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
L + + +H A++ ++ +G+AL+DM+GKC + A F+ M +++V W ++
Sbjct: 90 SGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSM 149
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
Y + G + F EM A N +T+ +L AC A ++ G ++ + L+
Sbjct: 150 TYCYVNCGMCRQGILLFREMGLNGIRA--NSLTVSSILPAC--ADYIKLGREV-HGFILR 204
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ + +V++ + + +A + M R +S W +L A
Sbjct: 205 NEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVS-WNVMLTA 251
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN T + L GK++H + I DV + + +Y+K G
Sbjct: 303 MQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGD 362
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + +F+ MP +++ WN I + G+ ++ F + +G EP+ +TF L+
Sbjct: 363 LELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSG 422
Query: 121 CSDCSLLQLG 130
CS L G
Sbjct: 423 CSHSQLADEG 432
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G ++ A F+K+PE +L W +I G+ G A+ + + S P+ L+
Sbjct: 25 GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR--PDKFVLLS 82
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
V AC+ +G + KI + +++G ++D+ G+ V+ A + +M ++
Sbjct: 83 VAKACAASGDLVVAKKI-HDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVK 141
Query: 381 PTISVWGAL 389
+S W ++
Sbjct: 142 DVVS-WTSM 149
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 331/566 (58%), Gaps = 12/566 (2%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVL 88
+QLHAL++ +G V VG + YSK G +A ++F + E R+ +WN+ + +
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A++ ++ + G D+ T + L A ++ L G Q H L++SG+ N V
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV 277
Query: 149 CNGLVDFYGKCNEVGL-AKVVFDGIIDKNDVSWCSMLVVYVQNYEE--ENGCQMFLTARR 205
+GL+D Y KC L + VFD I + + V W +M+ Y YE+ + + F +
Sbjct: 278 GSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGY-SLYEDLSDEALECFRQLQG 336
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSIQ 264
G P D + V+SAC+ ++ GR VH +A+K + N I V +AL+ MY KCG+++
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLR 396
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA+ F+ MPE N V +N++I GYA G +L F+ M M + P +T + VL+A
Sbjct: 397 DAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM--DFTPTNITFISVLAA 454
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C+ G VE G F M K+GI+P A H++C++DLLGRAG + A +I+ +P P
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
W ALL ACR++G EL AA+ L +LDP ++ +V+L+N+++ GR ++A VRK M+
Sbjct: 515 XWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
D G+KK GCSWI V RIHIF A+DT H +IQ L ++ ++K GY P+ A
Sbjct: 575 DRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASV 634
Query: 505 ----DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
V + E+ +GHHSEK+A++FGL++ G PI + KNLRIC DCH+A K+IS +V
Sbjct: 635 GGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVV 694
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
RE+ VRD++RFH F DG CSC YW
Sbjct: 695 KREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 218/467 (46%), Gaps = 51/467 (10%)
Query: 28 TGKQLHALALKS-----------------------------GQIHD--VFVGCSAFDMYS 56
TGK LHAL +KS HD VF + Y+
Sbjct: 26 TGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYA 85
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K + A ++FDEMP+ + ++N I+ G + A F+ +R + D T
Sbjct: 86 KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII-DK 175
+ AC + L RQLH V +G D VSV N L+ Y K + A+ +F + D+
Sbjct: 146 IITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDR 203
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
++VSW SM+V Y+Q+ E +++L G+ F ++SVL+A + L G H
Sbjct: 204 DEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFH 263
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGS-IQDAEIAFNKMPERNLVCWNAIIGGYA-HQGH 293
A +K+ N VGS L+D+Y KCG + D F+++ +LV WN +I GY+ ++
Sbjct: 264 AKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDL 323
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+D AL F ++ + P+ +LVCV+SACS + +G ++ + + LK I
Sbjct: 324 SDEALECFRQLQGVGHR--PDDCSLVCVISACSNMSSPSQGRQV-HGLALKLDIPSNRIS 380
Query: 354 Y-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK- 411
++ + + G + A + MP T+S + +++ Y + +G + +LF+
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAG---YAQHGMG-FQSLHLFQR 435
Query: 412 -LDPNDSGNHVLLSNMFAA---TGRWEEADLVRKEMKD-VGIKKGAG 453
L+ + + ++ ++ AA TGR E+ + MK GI+ AG
Sbjct: 436 MLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 8/334 (2%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT-GLKDDADKMFD 69
FT + A + + + G Q HA +KSG + VG D+YSK G D K+FD
Sbjct: 241 FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD 300
Query: 70 EMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
E+ +L WN IS ++ A++ F L+ G PD + ++ACS+ S
Sbjct: 301 EISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPS 360
Query: 129 LGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
GRQ+HG ++ N +SV N L+ Y KC + AK +FD + + N VS+ SM+ Y
Sbjct: 361 QGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGY 420
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR-SVHAVAVKACVEGN 246
Q+ +F P + SVL+ACA +E G+ + + K +E
Sbjct: 421 AQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPE 480
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
S ++D+ G+ G + +AE +P + W+A++G G+ ++A+ + +
Sbjct: 481 AGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLL 540
Query: 306 SMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ YV L + S R A +V K M+
Sbjct: 541 QLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDADK 66
P+D + C+ A S + P G+Q+H LALK + + V + MYSK G DA
Sbjct: 341 PDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKT 400
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD MPE N ++N+ I+ G ++ F + P ITF + L AC+
Sbjct: 401 LFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGR 460
Query: 127 LQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSML 184
++ G+ + + G + + ++D G+ ++ A+ + + I D W ++L
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL 520
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
L C L G+S+HA+ +K+ V + ++ + + +Y KC + A F+ + N+
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+N +I YA + + ++A F+EM P+ V+ +++A +R G + ++F
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQ------PDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 339 YSM 341
M
Sbjct: 129 LEM 131
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 326/588 (55%), Gaps = 5/588 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + P+ FT+ + A S+ + GK +H L+S ++ V + MY+K G
Sbjct: 161 MRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGS 220
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ +F M +++ +WNA I+ L G K+A F + G PD+ TF + L A
Sbjct: 221 LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGA 280
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ GR LH + GFD + ++ N L+ + +C + A+ F I K +W
Sbjct: 281 CASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAW 340
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y Q + ++ ++ EG P F SSV+ +CA + L G+ +H +
Sbjct: 341 NTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTS 400
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E ++ +G+ALV+MY KCGS+ DA+ +F+ + +++V W+A+I A GHA+ AL
Sbjct: 401 CGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEAL-- 458
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
E M + + N VT VL ACS G + +G+ F ++ +GI+ E+ +D
Sbjct: 459 -ELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFID 517
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG + A ++ MP + + LL C+V+G G+ + L+P + G+
Sbjct: 518 LLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGS 577
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLL+NM+AA GRW++ +R+ M+ G+K+ GCS I +++I+ F DTS+ RN EI
Sbjct: 578 YVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEI 637
Query: 480 QAMLTKLREEMK-AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
+A L +L MK GY+PDT +DV +++K + HSEK+A+ FGLI PPG +R
Sbjct: 638 RAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLR 697
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+C DCH+ K S I GR +IVRD RFH F G CSC DYW
Sbjct: 698 IIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 5/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ IS + +T + A + L G+ + A + G DV V S +++K G
Sbjct: 59 MVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGC 118
Query: 61 KDDADKMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
++A+ +F M R++ + A I V G+ A+D + +R G EPD T+ A L
Sbjct: 119 LEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILG 178
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
ACS L G+ +H ++ S GN+SV N L+ Y KC + +K +F + K+ VS
Sbjct: 179 ACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ Y +++ +F G P + SS+L ACA LE GR +H
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + + + L+ M+ +CGS++ A F + ++ L WN ++ YA AL
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALF 358
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
++ M + P+ T V+ +C+ GA+ +G K + + G + +V+
Sbjct: 359 LYKNM--LLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVN 415
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G + A + + + +S W A++ A +G E
Sbjct: 416 MYAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQHGHAE 455
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 165/356 (46%), Gaps = 5/356 (1%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D F+ MY K +DA ++FD + +RN +W+ + V + A++ + +
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R D T + L AC+ ++ GR + GF+ +V V L+ + KC +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 164 LAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
A+ VF + D +S +M+ YV++ + + + R +G+EP F +++L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ L G+ +H +++ GNI V +AL+ MY KCGS++D++ F M +++V WN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
A+I Y GH A S F M ++ P+ T +L AC+ +E G + +T
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTL--GHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ G ++ + R G ++ A + + + W +L A + K
Sbjct: 299 AR-GFDRDFAMQNNLISMFTRCGSLESARRYFYSIE-KKELGAWNTMLAAYAQFDK 352
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 330/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N+ T L A ++ + LH +L+ + + + Y+K G
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M +++++WNA I G P A+D + + R G PD + + L A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C LLQ G+++HGF++R+G + N V L+ Y C++ + F+ + DKN V W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCW 586
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y QN +F +G+EP + I+S+L AC++++ L LG+ VH A+K
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + FV +L+DMY K G + ++ FN++ + + WN +I G+ G + A+
Sbjct: 647 NSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVEL 706
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M R + P+ T + VL AC AG V +G+ M Y ++P EHYACV+D+
Sbjct: 707 FEDMK--RSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDM 764
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A I EMP P +W +LL++ Y E+G A+ L L+ N + ++
Sbjct: 765 LGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSY 824
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++A G+W+ +VR++MKD+ ++K GCSWI ++ +++ F A + S+ + EI+
Sbjct: 825 ILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIR 884
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
M +L +++ GY PD + L+++EE EK + HSEK+A+ FG + G +RI+
Sbjct: 885 KMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRIS 944
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+A K+IS RE+++RDN RFH F G CSC DYW
Sbjct: 945 KNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 13/350 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
P++FTFPCL KA + GK +H +A+K G I D+FVG + +Y K G D+A
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSD 123
++FD+MPE+NL +WN+ I G A AF +L +G PD+ T L CS
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ +G +HG V+ G + VCN L+D Y KC + A ++F I +K+ VSW SM
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 184 LVVYVQNYEEENGCQMFLTARR-----EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+ Y + E + F R+ E +E + I ++L AC + L R++H +
Sbjct: 386 IGAYSR---EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYS 442
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ + + +A + Y KCGS+ AE F M +++ WNA+IGG+A G AL
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL 502
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ EMT R +P+ ++V +L AC R G ++ G +I + L+ G++
Sbjct: 503 DFYFEMT--RLGILPDDFSIVSLLLACGRLGLLQYGKEI-HGFVLRNGLE 549
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G++L + S Q D + MYS G ++ +FD + +NL WNA +S V
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYV 185
Query: 88 LGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
AI F+ L T +PD TF + AC+ + LG+ +HG V+ G ++
Sbjct: 186 RNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDL 245
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEEENGCQMFLTAR 204
V N ++ YGKC + A +FD + ++N +SW S++ + +N + E L
Sbjct: 246 FVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+G+ P + ++L C+ +++G +H +AVK + + V +AL+DMY KCG +
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLS 365
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA---VPNYVTLVCV 321
+A I F K+ +++V WN++IG Y+ +G +F+ + M E N VT++ +
Sbjct: 366 EAAILFRKIENKSVVSWNSMIGAYSREG---FVFETFDLLRKMWMEEELMEVNEVTILNL 422
Query: 322 LSAC 325
L AC
Sbjct: 423 LPAC 426
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L C +++GR+L L V S F G+ + L+ Y C +++VFD +++K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 176 NDVSWCSMLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
N W +++ YV+N Y+E + L + E +P +F ++ AC + LG+S
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTE-FQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH +AVK + ++FVG+A++ +YGKCG + +A F+KMPE+NL+ WN++I G++ G
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A +F + +P+ T+V +L CS G V+ GM + + M +K G+
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMV 350
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++D+ + G + A + +++ + +S W +++ A
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSMIGA 388
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/585 (36%), Positives = 334/585 (57%), Gaps = 10/585 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++ + + AS L + GK++HA A+K+ ++ +G + DMYSK A
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+M ++L +W I+ A+ ++ G + D + + L ACS
Sbjct: 269 LVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLR 328
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +++HG+ ++ G ++ + N ++D Y C + A +F+ I K+ VSW SM+
Sbjct: 329 CLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMIS 387
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV N +F + VEP + S+LSA A ++ L G+ +H + +G
Sbjct: 388 CYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFR---KG 444
Query: 246 NIFVGS---ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ GS +LVDMY CGS+++A F ++LV W +I Y G A+ F
Sbjct: 445 FMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFS 504
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + +P+++T + +L ACS +G + +G ++ +M KY ++P EHYAC+VDLLG
Sbjct: 505 IMEDQK--LIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLG 562
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RA ++ AY +K M + PT VW A L ACR++ +LG IAA L LDP+ G++VL
Sbjct: 563 RANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVL 622
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
+SN+FAA+GRW++ + VR MK G+KK GCSWI V N++H F +D SH + +I
Sbjct: 623 ISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQK 682
Query: 483 LTKLREEM-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L ++ E++ K GY+P T L++V +EEK+ + HSE++A+A+GL++ G PIRITK
Sbjct: 683 LAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITK 742
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCH+ K +S RE+IVRD +RFH F DG CSC D+W
Sbjct: 743 NLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 206/419 (49%), Gaps = 11/419 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ + N +T +A G ++HA LKS Q+ DV+V + M+ + G
Sbjct: 103 MQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGK 162
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++FDE+ E++ TWN+ I+ G A+ F L+ +PD ++ + L A
Sbjct: 163 MSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAA 222
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L G+++H + +++ D N+ + N L+D Y KC V A +VFD +I+K+ +SW
Sbjct: 223 SGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISW 282
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y QN ++ + +G++ MI S L AC+ + L + VH +K
Sbjct: 283 TTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK 342
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ + + ++D+Y CG+I A F + +++V W ++I Y H G A+ AL
Sbjct: 343 RGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGV 401
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M E P+ +TLV +LSA + A+ KG +I + + G +VD+
Sbjct: 402 FYLMKETSVE--PDSITLVSILSAAASLSALNKGKEI-HGFIFRKGFMLEGSTVNSLVDM 458
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK----PELGRIAADNLFKLDPN 415
G ++ AY++ ++ +W ++NA ++G+ EL I D KL P+
Sbjct: 459 YACCGSLENAYKVFI-CTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ--KLIPD 514
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 199/397 (50%), Gaps = 7/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + + FTFPC+ KA + G ++H L +K G VFV S MY+K
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 61 KDDADKMFDEMPERN-LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A K+FD M ERN + +WN+ IS L G+ A+ F +++ G + T A L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC D S +LG ++H +++S +V V N LV + + ++ A +FD + +K++++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ + QN Q F + ++P + + S+L+A R+ L G+ +HA A+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K ++ N+ +G+ L+DMY KC + A + F+KM ++L+ W +I YA AL
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
++ + + + + + L ACS + ++ + TLK G+ ++D
Sbjct: 301 LLRKVQTKGMDV--DTMMIGSTLLACSGLRCLSHAKEV-HGYTLKRGLSDLMMQNM-IID 356
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
+ G ++ A + + + + +S W +++ +C V+
Sbjct: 357 VYADCGNINYATRMFESIKCKDVVS-WTSMI-SCYVH 391
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ T + A+++L GK++H + G + + S DMY+ G
Sbjct: 405 MKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGS 464
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A K+F ++L W I+ + GR K A++ F + PD ITF A L A
Sbjct: 465 LENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYA 524
Query: 121 CSDCSLLQLGRQL 133
CS L+ G++L
Sbjct: 525 CSHSGLINEGKRL 537
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 341/622 (54%), Gaps = 38/622 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK--- 57
M+ E P+ F A +A G+Q+H+ + SG ++ + S +MY K
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 58 ----------------------------TGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
G A +F+ MP ++ +WNA I+ +V
Sbjct: 61 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN-VSV 148
+ ++A++ F + G + T + L AC L+L RQ+H GF GN +V
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE--ENGCQMFLTARRE 206
N +V+ Y +C + K FD + +K V+W ML Y Q+ + + F E
Sbjct: 181 GNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAE 240
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G++P + S L ACA +A LE GRS+H A VE ++ +G+ +++MYGKCGS D
Sbjct: 241 GIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSD 300
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A++ F++MPE+ L+ WN++I YAH GHA ALSS +EM + P+ T V +L
Sbjct: 301 AKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFD--PDSGTSVSILYGL 358
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM-RPTIS 384
S AG +E+G++ F S +G++P + C+VDLL R G +D A E+I P +
Sbjct: 359 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 418
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
W LL AC+ YG P+ G A+ +F+L+P SG+ V+L+N++A+ GRW +A +RK M+
Sbjct: 419 AWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMME 478
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY 504
+ +KK GCSWI + +H F + ++ H + EI L KL M+ AGY+PDT ++
Sbjct: 479 RMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVH 538
Query: 505 DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREV 564
DVEE +K + HSE++A+ FGL++ PG IR+ KNLR+C DCH+A K IS +VGRE+
Sbjct: 539 DVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREI 598
Query: 565 IVRDNNRFHRFWDGYCSCSDYW 586
+VRD++RFH F G CSC D+W
Sbjct: 599 VVRDSSRFHHFKHGQCSCGDFW 620
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 330/586 (56%), Gaps = 2/586 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + N+ T L A ++ + LH +L+ + + + Y+K G
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F M +++++WNA I G P A+D + + R G PD + + L A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C LLQ G+++HGF++R+G + N V L+ Y C++ + F+ + DKN V W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCW 586
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+ML Y QN +F +G+EP + I+S+L AC++++ L LG+ VH A+K
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + FV +L+DMY K G + ++ FN++ + + WN +I G+ G + A+
Sbjct: 647 NSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVEL 706
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE+M R + P+ T + VL AC AG V +G+ M Y ++P EHYACV+D+
Sbjct: 707 FEDMK--RSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDM 764
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A I EMP P +W +LL++ Y E+G A+ L L+ N + ++
Sbjct: 765 LGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSY 824
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LLSN++A G+W+ +VR++MKD+ ++K GCSWI ++ +++ F A + S+ + EI+
Sbjct: 825 ILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIR 884
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
M +L +++ GY PD + L+++EE EK + HSEK+A+ FG + G +RI+
Sbjct: 885 KMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRIS 944
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRIC DCH+A K+IS RE+++RDN RFH F G CSC DYW
Sbjct: 945 KNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 13/350 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
P++FTFPCL KA + GK +H +A+K G I D+FVG + +Y K G D+A
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSD 123
++FD+MPE+NL +WN+ I G A AF +L +G PD+ T L CS
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ +G +HG V+ G + VCN L+D Y KC + A ++F I +K+ VSW SM
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 184 LVVYVQNYEEENGCQMFLTARR-----EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+ Y + E + F R+ E +E + I ++L AC + L R++H +
Sbjct: 386 IGAYSR---EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYS 442
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ + + +A + Y KCGS+ AE F M +++ WNA+IGG+A G AL
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL 502
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ EMT R +P+ ++V +L AC R G ++ G +I + L+ G++
Sbjct: 503 DFYFEMT--RLGILPDDFSIVSLLLACGRLGLLQYGKEI-HGFVLRNGLE 549
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 29 GKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G++L + S Q D + MYS G ++ +FD + +NL WNA +S V
Sbjct: 126 GRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYV 185
Query: 88 LGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
AI F+ L T +PD TF + AC+ + LG+ +HG V+ G ++
Sbjct: 186 RNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDL 245
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEEENGCQMFLTAR 204
V N ++ YGKC + A +FD + ++N +SW S++ + +N + E L
Sbjct: 246 FVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+G+ P + ++L C+ +++G +H +AVK + + V +AL+DMY KCG +
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLS 365
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA---VPNYVTLVCV 321
+A I F K+ +++V WN++IG Y+ +G +F+ + M E N VT++ +
Sbjct: 366 EAAILFRKIENKSVVSWNSMIGAYSREG---FVFETFDLLRKMWMEEELMEVNEVTILNL 422
Query: 322 LSAC 325
L AC
Sbjct: 423 LPAC 426
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L C +++GR+L L V S F G+ + L+ Y C +++VFD +++K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 176 NDVSWCSMLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
N W +++ YV+N Y+E + L + E +P +F ++ AC + LG+S
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTE-FQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH +AVK + ++FVG+A++ +YGKCG + +A F+KMPE+NL+ WN++I G++ G
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A +F + +P+ T+V +L CS G V+ GM + + M +K G+
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMV 350
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++D+ + G + A + +++ + +S W +++ A
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSMIGA 388
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/526 (42%), Positives = 304/526 (57%), Gaps = 37/526 (7%)
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
++A+ + G D T L +C+D S + +GR +HG +R G +G+ V L+D
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 156 YGKCNEVGLAKVVFDGII-------------------------------DKNDVSWCSML 184
Y KC +G A+ +FD +I +N VSW +M+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 185 VVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
Y QN E +F ++G E P I SVL ACA+ A LE GR +H A
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGHADMALSS 300
+ N V +AL MY KC S+ +A F+ + + +NL+ WN +I YA G A+S
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FE M +R P+ VT + +LS CS +G ++ G+ F M + ++P EHYACVVDL
Sbjct: 332 FENM--LRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDL 389
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A E+I +MPM+ SVWGALL ACR + E+ +AA LF L+P++SGN+
Sbjct: 390 LGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNY 449
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A G WEE +R +K G+KK GCSWI + + H+F D SH + EI
Sbjct: 450 VLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIY 509
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L L E++K AGYIPDT+F L+D+ EEEK + HSEK+A+AFGL+ PGV +R+T
Sbjct: 510 KFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVT 569
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH+A KFIS I RE+IVRD NRFH F DG CSC DYW
Sbjct: 570 KNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
++FT P + K+ + L G+ +H L+ G D +VG S DMY K G+ DA K+F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 69 DEMPERNLATWNAYIS--------------------------NAVLGGRPKN-----AID 97
D+M R++A+WNA I+ A++ G +N A+
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 225
Query: 98 AFINLRRTGGE--PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
F + + G E P+ +T + L AC+ + L+ GR++H F G N SV L
Sbjct: 226 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 285
Query: 156 YGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
Y KC + A+ FD I KN ++W +M+ Y + +F R GV+P
Sbjct: 286 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 345
Query: 214 MISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+LS C+ ++ G + + VE + + +VD+ G+ G + +A+ ++
Sbjct: 346 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 405
Query: 273 MP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
MP + W A++ + ++A + + + + NYV L
Sbjct: 406 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLL 452
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/561 (39%), Positives = 314/561 (55%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQ+HA +++ G Q D F F + S + A ++F+++ N+ TWN I
Sbjct: 52 KQIHAFSIRHGVPPQNPD-FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGF 110
Query: 87 VLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
P A++ F + PD TF A + + LG +H +VR+GFD
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSL 170
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N LV Y + A VF+ + ++ V+W S++ + N ++
Sbjct: 171 RFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGS 230
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
EGVEP F + S+LSAC + L LG VH VK + N +AL+D+Y KCG+ +D
Sbjct: 231 EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRD 290
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A+ F++M ER++V W ++I G A G + AL F E+ R P+ +T V VL AC
Sbjct: 291 AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE--RQGLKPSEITFVGVLYAC 348
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S G +++G F M +YGI P EH+ C+VDLL RAG V AY+ I+ MP+ P +
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W LL AC ++G ELG +A + +L+ SG+ VLLSN++A+ RW + VRK M
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK G S + +KNR++ F D SH ++ E AML K+ + +K GY+P T L D
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+EEEEK T + HH+EK+A+AF L+ PPG PIRI KNLR+C DCH A K IS + RE+I
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD +RFH F DG CSC DYW
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 171/377 (45%), Gaps = 26/377 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ TFP LFKA + L G+ +H++ +++G FV S MYS G A
Sbjct: 132 ILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAY 191
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ M R+ WN+ I+ L G P A+ + + G EPD T + L+AC +
Sbjct: 192 QVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELG 251
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG ++H ++V+ G N N L+D Y KC A+ VFD + +++ VSW S++V
Sbjct: 252 ALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIV 311
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-----RSVHAVAVK 240
N ++F R+G++P + VL AC+ L+ G R +
Sbjct: 312 GLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIL 371
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+E + +VD+ + G + DA MP N V W ++G GH ++
Sbjct: 372 PRIEHH----GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PGAEHYACV 357
+ E+ + ++V L + ++ R V+ KI L G+K PG Y+ V
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM----LMKGVKKTPG---YSLV 480
Query: 358 VDLLGRAGLVDRAYEII 374
L +R YE I
Sbjct: 481 -------ELKNRVYEFI 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ FT L A L G+++H +K G + + + D+YSK G
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGN 287
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FDEM ER++ +W + I + G A+ F L R G +P ITF L A
Sbjct: 288 FRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
Query: 121 CSDCSLLQLG-------RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGI 172
CS C +L G ++ +G L R G C +VD + +VG A + +
Sbjct: 348 CSHCGMLDEGFNYFRRMKEEYGILPRIEHHG----C--MVDLLCRAGKVGDAYDYIRNMP 401
Query: 173 IDKNDVSWCSML-VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+ N V W ++L + + E R E DF++ S L A R
Sbjct: 402 VPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 317/561 (56%), Gaps = 24/561 (4%)
Query: 28 TGKQLHALALKS--GQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
+G+ +H +++ + +V + + DMY K G A ++FD + +R++ +W I+
Sbjct: 207 SGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAG 266
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ R F + P+ IT + + C L LG+ H +L+R+GF +
Sbjct: 267 CIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMS 326
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+++ L+D YGKC +VG A+ +F+G+ K+ W ++ Y + +F+
Sbjct: 327 LALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLN 386
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
V+P + + S+LS CA L+LG+ HA + +E ++ + +AL++MY KCG +
Sbjct: 387 NDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTI 446
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A FN+ +R++ WN ++ G++ G AL F EM S E PN +T V + AC
Sbjct: 447 ARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVE--PNDITFVSIFHAC 504
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S +G +E HY C+VDLLGRAG +D A+ II+ MPMRP +
Sbjct: 505 SHSGLME--------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTII 544
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL AC+++ LG +AA + +LDP + G VL SN++A+ RW + VR+ M
Sbjct: 545 WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSH 604
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK G SWI V +H F++ D + + T++ M+T++ +++ +GY P+T L +
Sbjct: 605 SGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLN 664
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
++EEEK + + +HSEK+A AFGLI+ PG PIRI KNLRIC DCH+A K +S I GR +I
Sbjct: 665 IDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTII 724
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F +GYCSC YW
Sbjct: 725 VRDRNRFHHFSEGYCSCMGYW 745
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 204/412 (49%), Gaps = 8/412 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
++F P L KA + G++LH A K+G DVFV + +MY K G A +F
Sbjct: 87 DNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVF 146
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D+MPER++ +W + V A+ ++ G + + + + + ++
Sbjct: 147 DQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMK 206
Query: 129 LGRQLHGFLVRSGFDGN--VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
GR +HG++VR+ D VS+ L+D Y K + A+ +FD + ++ VSW M+
Sbjct: 207 SGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAG 266
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+++ + G + F E + P + + S+++ C + L+LG+ HA ++ +
Sbjct: 267 CIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMS 326
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMYGKCG + A FN + ++++ W+ +I YAH D + F EM
Sbjct: 327 LALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEM-- 384
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ + PN VT+V +LS C+ AGA++ G K ++ ++G++ ++++ + G
Sbjct: 385 LNNDVKPNNVTMVSLLSLCAEAGALDLG-KWTHAYINRHGLEVDVILETALINMYAKCGD 443
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVY--GKPELGRIAADNLFKLDPND 416
V A + E M+ I +W ++ ++ GK L + ++PND
Sbjct: 444 VTIARSLFNE-AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 494
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 163/324 (50%), Gaps = 10/324 (3%)
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLITFCAFLNACSDCSLLQLG 130
PE N +N IS+ P+ + + ++++R D + L AC+ S LG
Sbjct: 51 PEAN---YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLG 107
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R+LHGF ++GF +V VCN L++ Y KC + A++VFD + +++ VSW +ML YV++
Sbjct: 108 RELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRS 167
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
++ + GV+ + S+++ + ++ GR+VH V+ + + V
Sbjct: 168 KAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVS 227
Query: 251 --SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+AL+DMY K G + A+ F+++ +R++V W +I G D +F M +
Sbjct: 228 MTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRM--LE 285
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
+ PN +TL+ +++ C G ++ G K F++ L+ G ++D+ G+ G V
Sbjct: 286 EKLFPNEITLLSLITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVG 344
Query: 369 RAYEIIKEMPMRPTISVWGALLNA 392
A + + + + +W L++A
Sbjct: 345 YARALFNGVK-KKDVKIWSVLISA 367
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN+ T L + GK HA L++G + + + DMY K G
Sbjct: 283 MLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQ 342
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F+ + ++++ W+ IS + F+ + +P+ +T + L+
Sbjct: 343 VGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSL 402
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C++ L LG+ H ++ R G + +V + L++ Y KC +V +A+ +F+ + ++ W
Sbjct: 403 CAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMW 462
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + + + ++F GVEP D S+ AC+ +E H
Sbjct: 463 NTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME-----HY---- 513
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
LVD+ G+ G + +A MP R N + W A++ A + H ++AL
Sbjct: 514 ----------GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLA--ACKLHKNLAL 560
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 319/587 (54%), Gaps = 38/587 (6%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA + SG H + ++YS D A +FD P + WN+ I
Sbjct: 70 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 128
Query: 91 RPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
+ A++ + + GG E D+ ++ S L+ R++ + + +V
Sbjct: 129 QYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR----DVVAW 184
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV------------------------ 185
N ++ + + +A+ VFD ++D++DVSW +M+
Sbjct: 185 NAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVT 244
Query: 186 ------VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
Y+QN + F R E P SVL A A +A G + HA +
Sbjct: 245 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 304
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ N VG++L+DMY KCG + +E FN+M ++ V WNA++ GYA GH D A++
Sbjct: 305 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 364
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M + + + V+ V VLSAC AG VE+G KIF+SM+ KY IKP EHYAC+VD
Sbjct: 365 LFSLMQESQVQI--DSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 422
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAGL D IK MP+ P VWGALL +CR++ +LG +A D+L KL+P + +
Sbjct: 423 LLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAH 482
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
V+LS+++A +GRW +A R +M D+G+KK GCSW+ +KN++H F+ D SH + +
Sbjct: 483 FVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESM 542
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L E+M+ GY+PD + L +VEEE+K + HSE++A+ F L+ PPG I+I
Sbjct: 543 HLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQI 602
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCH+ KFIS I R +IVRD RFH F DG CSC+DYW
Sbjct: 603 VKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 102/338 (30%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S C L Q+H ++ SGF + S+ + L++ Y ++ LA+ VFD + + + W
Sbjct: 60 SSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWN 118
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
SM+ Y ++ + +M+ + + K
Sbjct: 119 SMIRAYTRSKQYNEALEMY----------------------------------YCMVEKG 144
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII---------------- 285
+E ++F+G+ LVDMY K G ++ A F+KMP+R++V WNA+I
Sbjct: 145 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVF 204
Query: 286 ---------------GGYAH------------------------------QGHADMALSS 300
GYAH GHA A+SS
Sbjct: 205 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISS 264
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + MR E PN VT V VL A + A +GM F++ ++ G ++D
Sbjct: 265 FHQ---MRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLID 320
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G +D + ++ EM + T+S W A+L+ V+G
Sbjct: 321 MYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHG 357
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR E PN TF + A++ L G HA ++ G + + VG S DMY+K G
Sbjct: 268 MRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQ 327
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++K+F+EM ++ +WNA +S + G AI F ++ + + D ++F + L+A
Sbjct: 328 LDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSA 387
Query: 121 CSDCSLLQLGRQL 133
C L++ GR++
Sbjct: 388 CRHAGLVEEGRKI 400
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 330/580 (56%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN++ F + + GKQ H LKSG + +V + MYS+ D A ++
Sbjct: 126 PNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQI 185
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
D +P ++ ++N+ +S V G A + D +T+ + L C+ L
Sbjct: 186 LDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDL 245
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
QLG Q+H L+++G +V V + L+D YGKC EV A+ FDG+ D+N V+W ++L Y
Sbjct: 246 QLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAY 305
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+QN E +F E P +F + +L+ACA + L G +H V + + ++
Sbjct: 306 LQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHL 365
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
VG+AL++MY K G+I + F+ M R+++ WNA+I GY+H G AL F++M M
Sbjct: 366 IVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDM--M 423
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
PNYVT + VLSAC V++G F + K+ ++PG EHY C+V LLGRAGL+
Sbjct: 424 SAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLL 483
Query: 368 DRAYEIIKEMP-MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
D A +K ++ + W LLNAC ++ LG+ + + ++DP+D G + LLSNM
Sbjct: 484 DEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNM 543
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
A +W+ +RK MK+ IKK G SW+ ++N H+F ++ ++H +T+I + +L
Sbjct: 544 HAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQL 603
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+K GY PD L+DVE+E+K + HHSEK+ALA+GL+ IPP PIRI KNLR+C
Sbjct: 604 LAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMC 663
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K IS R +IVRD NRFH F +G C+C+D+W
Sbjct: 664 DDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 180/380 (47%), Gaps = 10/380 (2%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIH---DVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
L K S+ GK +HA + Q D+ S ++YSK G A K+FD M
Sbjct: 29 LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+RN+ +W+A + + G + F NL P+ F L+ C+D ++ G+
Sbjct: 89 QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q HG+L++SG + V N L+ Y +C V A + D + + S+ S+L V++
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESG 208
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
Q+ E V SVL CA+I L+LG +HA +K + ++FV S
Sbjct: 209 CRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSS 268
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
L+D YGKCG + +A F+ + +RN+V W A++ Y GH + L+ F T M E
Sbjct: 269 TLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLF---TKMELED 325
Query: 312 V-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
PN T +L+AC+ A+ G + + + G K ++++ ++G +D +
Sbjct: 326 TRPNEFTFAVLLNACASLVALAYG-DLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSS 384
Query: 371 YEIIKEMPMRPTISVWGALL 390
Y + M R I+ W A++
Sbjct: 385 YNVFSNMMNRDVIT-WNAMI 403
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 5/354 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M EC+ + T+ + + + G Q+HA LK+G + DVFV + D Y K G
Sbjct: 220 MVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGE 279
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K FD + +RN+ W A ++ + G + ++ F + P+ TF LNA
Sbjct: 280 VLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNA 339
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G LHG +V SGF ++ V N L++ Y K + + VF +++++ ++W
Sbjct: 340 CASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITW 399
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M+ Y + + +F G P VLSAC +A ++ G +
Sbjct: 400 NAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMK 459
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAE--IAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
K VE + + +V + G+ G + +AE + + ++V W ++ + ++
Sbjct: 460 KFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLG 519
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
E + M V Y L + + + V K K+ +K +PGA
Sbjct: 520 KQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKK--EPGA 571
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 143/304 (47%), Gaps = 10/304 (3%)
Query: 127 LQLGRQLHGFLV---RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ G+ +H LV ++ D +++ N L++ Y KC + A+ +FD ++ +N VSW ++
Sbjct: 39 LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSAL 98
Query: 184 LVVYVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ Y+ E +F + P +++ + VLS CA ++ G+ H +K+
Sbjct: 99 MMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSG 158
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + +V +AL+ MY +C + A + +P ++ +N+I+ G A +
Sbjct: 159 LLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLK 218
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M C + + VT V VL C++ ++ G++I ++ LK G+ + ++D G
Sbjct: 219 RMVD-EC-VIWDSVTYVSVLGLCAQIRDLQLGLQI-HAQLLKTGLVFDVFVSSTLIDTYG 275
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE--LGRIAADNLFKLDPNDSGNH 420
+ G V A + + R ++ W A+L A G E L L PN+
Sbjct: 276 KCGEVLNARKQFDGLRDRNVVA-WTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFA 334
Query: 421 VLLS 424
VLL+
Sbjct: 335 VLLN 338
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 5/167 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAV---KACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ ++L A L G+++HA V + + +I ++L+++Y KCG + A F+
Sbjct: 26 VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+M +RN+V W+A++ GY H+G L F + S+ A PN VLS C+ +G V
Sbjct: 86 RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLD-SAYPNEYIFTIVLSCCADSGRV 144
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
++G K + LK G+ ++ + R VD A +I+ +P
Sbjct: 145 KEG-KQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVP 190
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 312/533 (58%), Gaps = 14/533 (2%)
Query: 62 DDADKMFDE------MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFC 115
D+A ++F++ +PE + W A G PK A+ + + G+ F
Sbjct: 126 DEARRVFEDGGEDVDLPE---SVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFS 182
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L ACSD LQ GR +H ++++ D + V N L+ Y + A VFDG+ +
Sbjct: 183 MALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHR 242
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VSW S++ V+ + F + +G+ ++++L CAR+ L G+ +H
Sbjct: 243 NVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIH 302
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
AV VK+ + + V ++LVDMY KCG++ FN M ++L WN +I GYA G
Sbjct: 303 AVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMT 362
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ SF+EM C P+ +T + +LS CS AG + G ++F M + YGI P EHY
Sbjct: 363 EAMESFQEMI---CSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHY 419
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VD+LGRAG + A EI+K MP +PT S+WG+LLN+CR++G L A LF+L+P
Sbjct: 420 ACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEP 479
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
N++GN+V+LSN++A G WE +VR+ M+ G+ K AGCSW+ +K++IH F A ++
Sbjct: 480 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 539
Query: 475 RNT-EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
RN+ E + + +L E M+ GY+PDT L+DV EE + V HSE++A F LI
Sbjct: 540 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 599
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G+PIRITKNLR+C DCHS K +S + GR +++RD NRFH F DG CSC DYW
Sbjct: 600 GMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 141/311 (45%), Gaps = 2/311 (0%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
+F F KA S L TG+ +HA LK+ + D V + +YS+ G D+A ++FD
Sbjct: 178 NFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFD 237
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
MP RN+ +WN+ I+ V AI+AF ++ G +T L C+ + L
Sbjct: 238 GMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGS 297
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G+++H +V+S + V N LVD Y KC + + VF+G+ K+ SW +++ Y
Sbjct: 298 GKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAI 357
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIF 248
N + F G P ++LS C+ + G R + + + +
Sbjct: 358 NGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVE 417
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNL-VCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ LVD+ G+ G I++A MP + W +++ G+ +A + + + +
Sbjct: 418 HYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFEL 477
Query: 308 RCEAVPNYVTL 318
NYV L
Sbjct: 478 EPNNAGNYVML 488
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/514 (41%), Positives = 311/514 (60%), Gaps = 12/514 (2%)
Query: 75 NLATWNAYISNAVLGGRPKN-----AIDAFINLRRT--GGEPDLITFCAFLNACSDCSLL 127
+LA+ N + NA L +N AI F + + PD TF + L AC+ + +
Sbjct: 49 HLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHV 108
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLV 185
G+++H + + GF+ N+ V N L+D Y K + LA+ +FD + D+N V W +M+
Sbjct: 109 VNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIA 168
Query: 186 VYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y QN + + ++F + + GV P D + SVL ACA + L+LG+ + + +
Sbjct: 169 GYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMA 228
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+F+G+AL DMY KCG I +A FNKM ER+++ W+ II G A GHAD A F EM
Sbjct: 229 LGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEM 288
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ C PN V + +L+AC+ AG V+KG+ F +M +YG+ P EHY CVVDLL RA
Sbjct: 289 --LDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRA 346
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G +D+A ++I MPM+P + +WGALL CR+Y G+ ++ +LD + SG++V L+
Sbjct: 347 GELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLA 406
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++++ GR ++A R M++ G+ K GCSWI V N +H F D SH + +I +M+
Sbjct: 407 NVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIR 466
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
+L +MK AGY P T+ ++ ++EEEK + HSEK+A+AFGLI+ G IR+ KNLR
Sbjct: 467 ELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLR 526
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
IC DCH A K ISGIV RE+IVRD +RFH F DG
Sbjct: 527 ICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 17/332 (5%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P++FTF + KA + L V G+++HA+ K G ++FV S DMY K G A
Sbjct: 89 NPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARH 148
Query: 67 MFDEM--PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSD 123
+FDEM +RN+ WNA I+ + +AI+ F +++ GG P+ +T + L AC+
Sbjct: 149 LFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAH 208
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L LG+ + GF+ R + + N L D Y KC + A+ VF+ + +++ +SW S+
Sbjct: 209 LGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISW-SI 267
Query: 184 LVVYVQNY---EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Y +E GC F G +P D + +L+AC ++ G + K
Sbjct: 268 IICGLAMYGHADEAFGC--FYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDK 325
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG---YAHQGHAD 295
V + +VD+ + G + AE + MP + N++ W A++GG Y G
Sbjct: 326 EYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQ 385
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ E+ S + +YV L V S+ R
Sbjct: 386 RVVQHILELDS---DHSGSYVYLANVYSSMGR 414
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PND T + A + L GK + + +F+G + DMY+K G +A
Sbjct: 192 VVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEAR 251
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F++M ER++ +W+ I + G A F + G +P+ + F L AC+
Sbjct: 252 RVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAG 311
Query: 126 LLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G + + G V +VD + E+ A+ + + + N + W ++
Sbjct: 312 LVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGAL 371
Query: 184 L 184
L
Sbjct: 372 L 372
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 254 VDMYGKCG---SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
V + G C +++ A + F + N+ NA + A H A+ F S
Sbjct: 28 VKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNA 87
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ T VL AC+ V G KI ++M K G + ++D+ +AG + A
Sbjct: 88 PNPDEFTFTSVLKACAGLAHVVNGQKI-HAMVTKQGFESNLFVRNSLIDMYFKAGYLLLA 146
Query: 371 YEIIKEMPMRP-TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG---NHVLLSNM 426
+ EM +R + W A++ Y + E A + +F++ G N V L ++
Sbjct: 147 RHLFDEMFVRDRNVVCWNAMIAG---YAQNEKYSDAIE-VFRMMQQFGGVVPNDVTLVSV 202
Query: 427 FAA--------TGRWEEADLVRKEM 443
A G+W + + R+EM
Sbjct: 203 LPACAHLGALDLGKWIDGFISRREM 227
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 322/587 (54%), Gaps = 4/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R P+ L A L + GK++HA A+K D VG + DMY K
Sbjct: 357 MLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRY 416
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + +FD M ++ +W I+ R A++ F ++ G + D + + L A
Sbjct: 417 IEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEA 476
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L +QLH + +R+G ++ V N ++D YG+C EV + +F+ + K+ V+W
Sbjct: 477 CSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTW 535
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ Y + +F + V+P + S+L A ++ L G+ VH ++
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ S+LVDMY CGS+ A FN + +++V W A+I GH A+
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ M ++ P++V+ + +L ACS + V +G M Y ++P EHYACVVDL
Sbjct: 656 FKRM--LQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDL 713
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGR+G + AYE IK MP++P VW +LL ACRV+ EL +AA+ L +L+P++ GN+
Sbjct: 714 LGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNY 773
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VL+SN+FA G+W A VR + + G++K CSWI + N +H F +D SH I
Sbjct: 774 VLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERIN 833
Query: 481 AMLTKLREEM-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L ++ E + K GY DT L+DV EEEK+ + HSE++A++FGLI PG+P+RI
Sbjct: 834 LKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRI 893
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K +S + R+++VRD NRFH F G CSC D+W
Sbjct: 894 AKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 223/434 (51%), Gaps = 15/434 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYSKTG 59
M+R +S N +T + + + L G++LHA LKSG +V + C+A MY+K G
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGS--EVNIQCNALLVMYTKCG 314
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++F E+ E++ +WN+ +S V G AI+ + R G +PD + +
Sbjct: 315 RVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSS 374
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L G+++H + ++ D + V N L+D Y KC + + VFD + K+ +S
Sbjct: 375 AVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHIS 434
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ Y Q+ ++F A++EG++ MI S+L AC+ + + L + +H A+
Sbjct: 435 WTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAI 494
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + ++ V + ++D+YG+CG + + F + ++++V W ++I YA+ G + AL
Sbjct: 495 RNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALV 553
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F EM S + P+ V LV +L A ++ KG ++ + ++ + +VD
Sbjct: 554 LFAEMQSTDVQ--PDSVALVSILGAIGGLSSLAKGKEV-HGFLIRRNFHMEEAIVSSLVD 610
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDS 417
+ G + A ++ + + + +W A++NA ++G G+ A D LFK L +
Sbjct: 611 MYSGCGSLSGALKVFNAVKCKDMV-LWTAMINATGMHGH---GKQAID-LFKRMLQTGVT 665
Query: 418 GNHV-LLSNMFAAT 430
+HV L+ ++A +
Sbjct: 666 PDHVSFLALLYACS 679
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 13/390 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++P+ T + KAS G ++H LA+K G FV + MY+K G+ D A
Sbjct: 160 VAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 66 KMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
++F+ M + R++A+WN+ IS + G A+D F ++R + T L C++
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
+ L LGR+LH L++SG + N+ CN L+ Y KC V A VF I +K+ +SW SML
Sbjct: 280 AQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSML 338
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YVQN + R G +P I S+ SA + L G+ VHA A+K ++
Sbjct: 339 SCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLD 398
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ VG+ L+DMY KC I+ + F++M ++ + W II YA AL F E
Sbjct: 399 SDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREA 458
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC---VVDLL 361
+ P + + +L ACS + ++ Y I+ G ++D+
Sbjct: 459 QKEGIKVDP--MMIGSILEACSGLETILLAKQLHC-----YAIRNGLLDLVVKNRIIDIY 511
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G G V + ++ + + + ++ W +++N
Sbjct: 512 GECGEVYHSLKMFETVEQKDIVT-WTSMIN 540
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 207/467 (44%), Gaps = 24/467 (5%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH--DVFVGCSAFDMYSKTGLKDDA 64
SP + + +A G Q+HA A+ +G + D F+ MY K G DA
Sbjct: 55 SPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADA 114
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR---RTGGEPDLITFCAFLNAC 121
+FD M R + +WNA I + G A+ + +R +G PD T + L A
Sbjct: 115 RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKAS 174
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-SW 180
+ G ++HG V+ G D + V N L+ Y KC + A VF+ + D DV SW
Sbjct: 175 GVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASW 234
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ +QN +F +R + + VL C +A L LGR +HA +K
Sbjct: 235 NSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLK 294
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ E NI + LV MY KCG + A F ++ E++ + WN+++ Y G A+
Sbjct: 295 SGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEF 353
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
EM +R P++ +V + SA G + G ++ ++ +K + + ++D+
Sbjct: 354 ISEM--LRGGFQPDHACIVSLSSAVGHLGWLLNGKEV-HAYAIKQRLDSDTQVGNTLMDM 410
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL----NACRVYGKPELGRIAADNLFKLDPND 416
+ ++ + + M ++ IS W ++ + R E+ R A K+DP
Sbjct: 411 YMKCRYIEYSAHVFDRMRIKDHIS-WTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMM 469
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
G S + A +G E L+ K++ I+ G + VKNRI
Sbjct: 470 IG-----SILEACSGL--ETILLAKQLHCYAIRN--GLLDLVVKNRI 507
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVEGNI-FVGSALVDMY 257
LT++ G P VL A + G VHA AV +EG+ F+ + L+ MY
Sbjct: 46 LLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMY 105
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYV 316
GKCG + DA + F+ M R + WNA+IG Y G A AL + M V P+
Sbjct: 106 GKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGC 165
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TL VL A G G ++ + + +K+G+ ++ + + G++D A + +
Sbjct: 166 TLASVLKASGVEGDGRCGCEV-HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFEL 224
Query: 377 MPMRPTISVWGALLNAC 393
M ++ W ++++ C
Sbjct: 225 MHDGRDVASWNSMISGC 241
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 317/567 (55%), Gaps = 36/567 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P P FK+ +A V G+Q+H+ + G +VFV SA MY++ G DDA +M
Sbjct: 10 PGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQM 69
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSL 126
F+EM R++ +WNA IS G A+D F L +PD T + L +
Sbjct: 70 FEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS------ 123
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+G+ + ++ L K VFD + K +SW +ML V
Sbjct: 124 --MGK-------------------------ARVEDIALLKGVFDEMRFKGLISWNAMLAV 156
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y N ++F+ +++G+EP +++VL +C ++ L LG+ +H V + + +
Sbjct: 157 YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSS 216
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMY CG +++A F+ M R++V W +II Y GH A+ FE+M
Sbjct: 217 MLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCG 276
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E P+ + V +L+ACS AG ++ G FYSMT ++ I P EHYAC+VDLLGRAG
Sbjct: 277 QGLE--PDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 334
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
+ AY+ I MP++P VWGALL ACR++ ++G +AAD+L +L P +G +VLLSN+
Sbjct: 335 IREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNI 394
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A GRW + +VR M+ GIKK G S + +R+H F DTSH ++ I L++L
Sbjct: 395 YARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSEL 454
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
++ GY P+ L+DVEEE+K + HSEK+A+AF LI PG PIRIT NLR C
Sbjct: 455 LRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTC 514
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFH 573
DCH A K IS I GRE+I++D NR H
Sbjct: 515 SDCHHAAKLISTIAGREIILKDVNRIH 541
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
++ + G+ P + +CA GL LGR +H+ + ++GN+FV + + MY +C
Sbjct: 1 MSPQGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARC 60
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G DA F +M R++V WNA+I G+AH G A+ F E+ +++C P+ T+
Sbjct: 61 GRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPK-PDAGTMAS 119
Query: 321 VLSACSRA 328
+L + +A
Sbjct: 120 ILPSMGKA 127
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+++ I P+ T + + + GK++H + + + + + DMY+ G
Sbjct: 173 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 232
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +FD M R++ +W + IS G + AID F + G EPD I F A L A
Sbjct: 233 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 292
Query: 121 CSDCSLLQLGRQ 132
CS LL +G+
Sbjct: 293 CSHAGLLDMGKH 304
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/584 (36%), Positives = 321/584 (54%), Gaps = 13/584 (2%)
Query: 8 PNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
PN T+ ++ S L I GKQ+H+ A++SG + V + +MY K G + A
Sbjct: 109 PNGSTYIGFLRSLLNPSGLEI---GKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ +F++M E+N W + R +A+ F + G E D F L AC+
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L GRQ+HG +V+ G + VSV LVDFY KC+ + A F+ I + NDVSW +++
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALI 285
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y Q E E + F + R V+ F +S+ AC+ +A G HA A+K+ +
Sbjct: 286 TGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLV 345
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
SA++ MY +CG + A F + + + V W AII GYA+QG+A AL F M
Sbjct: 346 AYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRM 405
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
C PN VT + VL+ACS +G V +G + SM+ YG+ +HY C+VD+ RA
Sbjct: 406 QD--CGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRA 463
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A E+I+ MP P W LL C Y E+G +AA+NLF+LDP D+ ++L+
Sbjct: 464 GFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMF 523
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A+ G+W+EA VRK M + ++K CSWI+VK ++H F D H + EI + L
Sbjct: 524 NLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLE 583
Query: 485 KLREEM--KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L + + + G + + + + E +E++ HSE++ALAFGLI+ P P+ + KN
Sbjct: 584 ALNDSVIKEETGLLTEEDVSNSLPERKEQLLV---HSERLALAFGLISTPSSAPVVVFKN 640
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR C DCH K +S I GRE++VRD+ RFH F G CSC+DYW
Sbjct: 641 LRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
IS + ++ CLF+A + G+ H ++ + F+ S MY K G DA
Sbjct: 6 ISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADAR 65
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDEM ERNL +WN IS G F N+ +P+ T+ FL + + S
Sbjct: 66 KVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPS 125
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L++G+Q+H +RSG N SV + + Y KC + A++VF+ + +KN V+W ++V
Sbjct: 126 GLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMV 185
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q + + +F EGVE +++ S VL ACA + L GR +H VK +E
Sbjct: 186 GYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLES 245
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ VG+ LVD Y KC +++ A AF + E N V W+A+I GY G + AL +FE
Sbjct: 246 EVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFE--- 302
Query: 306 SMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
S+R +V N T + ACS G + ++ +K + + ++ + R
Sbjct: 303 SLRTRSVDINSFTYTSIFQACSALADFNSGAQA-HADAIKSSLVAYQHGESAMITMYSRC 361
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G +D A + + + P W A++
Sbjct: 362 GRLDYATRVFESID-DPDAVAWTAII 386
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + +++ F + KA + L G+Q+H +K G +V VG D Y K
Sbjct: 203 MVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSN 262
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A K F+ + E N +W+A I+ G + A+ F +LR + + T+ + A
Sbjct: 263 LESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQA 322
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + G Q H ++S + ++ Y +C + A VF+ I D + V+W
Sbjct: 323 CSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAW 382
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAV 239
+++ Y ++F + GV P +VL+AC+ + GR + +++
Sbjct: 383 TAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSS 442
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
V I +VD+Y + G +Q+A MP + + W ++GG
Sbjct: 443 NYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 331/589 (56%), Gaps = 8/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +P+ L A L + G+++HA A+K D+ + + DMY K
Sbjct: 356 MVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYS 415
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + ++FD M ++ +W I+ R AI F ++ G + D + + L A
Sbjct: 416 VECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEA 475
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + L +Q+H + +R+G ++ + N ++D YG+C EV A +F+ + K+ V+W
Sbjct: 476 CSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTW 534
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV- 239
SM+ + +N +F G++P + +L A A ++ L G+ +H +
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR 594
Query: 240 -KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
K VEG + S+LVDMY CGS+ A F++ +++V W A+I GH A+
Sbjct: 595 GKFPVEGAVV--SSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAI 652
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ M + P++V+ + +L ACS + V++G M KY ++P EHYACVV
Sbjct: 653 YIFKRM--LETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVV 710
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGR+G + AY+ IK MP+ P VW ALL ACR++ EL IA D L +L+P++ G
Sbjct: 711 DLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPG 770
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N+VL+SN+FA G+W +R +M + G++K CSWI + N +H F A+D SH +
Sbjct: 771 NYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQA 830
Query: 479 IQAMLTKLREEMKAAG-YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I L ++ E+++ G Y+ DT+F L+DV EEEK+ + HSE++A++FGLI+ G P+
Sbjct: 831 IHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPL 890
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+CGDCH K +S + RE++VRD NRFH F G CSC D+W
Sbjct: 891 RIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 7/386 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ T + KA A G ++H LA+KSG V + MY+K GL D A +
Sbjct: 160 APDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALR 219
Query: 67 MFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ M + R++A+WN+ IS V G A+D F ++ G + T L C++ +
Sbjct: 220 VFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELA 279
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR+LH L++ G + N+ CN L+ Y +C V A VF I DK+ +SW SML
Sbjct: 280 QLNHGRELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLS 338
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YVQN F + G P I S+LSA + L GR VHA AVK ++
Sbjct: 339 CYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDS 398
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ + + L+DMY KC S++ + F++M ++ V W II YA A+ F
Sbjct: 399 DLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQ 458
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P + + +L ACS ++ +K +S ++ G+ ++D+ G G
Sbjct: 459 KEGIKVDP--MMMGSILEACSGLKSISL-LKQVHSYAIRNGLLDLILKNR-IIDIYGECG 514
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
V A I EM + I W +++N
Sbjct: 515 EVCYALNIF-EMLDKKDIVTWTSMVN 539
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 207/399 (51%), Gaps = 10/399 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYSKTG 59
M+ + S N +T + + + L G++LHA LK G + + C+A MY++ G
Sbjct: 256 MQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGT--EFNIQCNALLVMYARCG 313
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++F E+ +++ +WN+ +S V AID F + + G PD + L+
Sbjct: 314 WVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLS 373
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
A L GR++H + V+ D ++ + N L+D Y KC V + VFD + K+ VS
Sbjct: 374 AVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVS 433
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ Y Q+ F TA++EG++ M+ S+L AC+ + + L + VH+ A+
Sbjct: 434 WTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAI 493
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + ++ + + ++D+YG+CG + A F + ++++V W +++ +A G A++
Sbjct: 494 RNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVA 552
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVV 358
F +M + + P+ V LV +L A + ++ KG +I + + K+ ++ + +V
Sbjct: 553 LFGKMLNAGIQ--PDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLV 608
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
D+ G ++ A ++ E + + +W A++NA ++G
Sbjct: 609 DMYSGCGSMNYALKVFDEAKCKDVV-LWTAMINATGMHG 646
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 149/317 (47%), Gaps = 11/317 (3%)
Query: 29 GKQLHALALKSGQIHDV---FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
G+QLHA A+ +G + D F+ MY K G DA ++FD MP R + +WNA I
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 86 AVLGGRPKNAIDAFINLRRT----GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
+ G A+ + +R + G PD T + L AC + G ++HG V+SG
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMF 200
D + V N LV Y KC + A VF+ + D DV SW S + VQN +F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ +G + VL CA +A L GR +HA +K E NI + LV MY +C
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARC 312
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F ++ +++ + WN+++ Y A+ F EM P++ +V
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN--PDHACIVS 370
Query: 321 VLSACSRAGAVEKGMKI 337
+LSA G + G ++
Sbjct: 371 LLSAVGHLGRLINGREV 387
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI---FVGSALVDMYG 258
+AR P D VL A + GR +HA AV G+ F+ + L+ MYG
Sbjct: 46 SARGRAPPPTDHY-GWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYG 104
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR--CEAVPNYV 316
KCG + DA F+ MP R + WNA+IG G A A+ + M + A P+
Sbjct: 105 KCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGC 164
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TL VL AC G G ++ + + +K G+ +V + + GL+D A + +
Sbjct: 165 TLASVLKACGAEGDGRCGSEV-HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEW 223
Query: 377 MPMRPTISVWGALLNAC 393
M ++ W + ++ C
Sbjct: 224 MRDGRDVASWNSAISGC 240
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 323/603 (53%), Gaps = 72/603 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMY---------- 55
+ P++ P KA + L +Q+H +A SG D FV S MY
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH 169
Query: 56 ---------------------SKTGLKDDADKMFDEMPER----NLATWNAYISNAVLGG 90
++ G D+A ++F EM + NL +WN I+ G
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A+ F+++ G EPD T + L A D L +G +HG++++ G + V +
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289
Query: 151 GLVDFYGKCNEVGLAKVVFDGI-----------------------------------IDK 175
L+D YGKC+ VFD + ++
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VSW SM+ QN + ++F + GV+P I +L AC IA L G++ H
Sbjct: 350 NVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH 409
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+++ + +++VGSAL+DMY KCG IQ + I F+ +P +NLVCWNA+I GYA G A
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAK 469
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ F+ M R P+ ++ CVLSACS++G E+G F SM+ KYGI+ EHYA
Sbjct: 470 EAMEIFDLMQ--RSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYA 527
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+V LL RAG +++AY +I+ MP+ P VWGALL++CRV+ LG +AA+ LF+L+P+
Sbjct: 528 CMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS 587
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+ GN++LLSN++A+ G W E + VR MK+ G++K GCSWI VKN++H+ A D SH +
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
T+I L KL EMK GY P+ NF L DVEE++K + HSEK+A+ FGL+ PPG
Sbjct: 648 MTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGY 707
Query: 536 PIR 538
P++
Sbjct: 708 PLQ 710
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 41/383 (10%)
Query: 15 CLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPER 74
CL +++L +Q HA LK+G +D + Y+ DA + D +PE
Sbjct: 21 CLNSTTASLS---QTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP 77
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
N+ +++ I + +A+ F + G PD + + AC+ S L+ RQ+H
Sbjct: 78 NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH 137
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---- 190
G SGFD + V + LV Y KCN++ A VFD + + + VSW +++ Y +
Sbjct: 138 GIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVD 197
Query: 191 -----YEE--ENGCQ------------------------MFLTARREGVEPKDFMISSVL 219
+ E ++G Q MFL G EP ISSVL
Sbjct: 198 EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
A + L +G +H +K + + V SAL+DMYGKC + F++M ++
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG 317
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
NA I G + G + +L F ++ E N V+ +++ CS+ G + +++F
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL--NVVSWTSMIACCSQNGRDMEALELFR 375
Query: 340 SMTLKYGIKPGAEHYACVVDLLG 362
M + G+KP + C++ G
Sbjct: 376 EMQIA-GVKPNSVTIPCLLPACG 397
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 161/343 (46%), Gaps = 14/343 (4%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S + L RQ H ++++G + + L+ Y A +V D + + N S+
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ + + ++ + F G+ P + ++ S + ACA ++ L+ R VH +A +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + FV S+LV MY KC I+DA F++M E ++V W+A++ YA QG D A F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM + PN ++ +++ + +G + + +F M L+ G +P + V+ +
Sbjct: 204 SEMGDSGVQ--PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEPDGTTISSVLPAV 260
Query: 362 GR-----AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
G G++ Y I + + +S AL++ +YGK + ++D D
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVS--SALID---MYGKCSCTSEMSQVFDQMDHMD 315
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
G+ + G+ E + + +++KD G++ SW S+
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNV-VSWTSM 357
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/589 (35%), Positives = 332/589 (56%), Gaps = 8/589 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ + L AS + GK++HA A+++G ++ +G + DMY+K
Sbjct: 340 MQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCC 399
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
F+ M E++L +W I+ AI+ F ++ G + D + + L A
Sbjct: 400 VKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS R++HG++ + ++ + N +V+ YG+ A+ F+ I K+ VSW
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSW 518
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ V N ++F + ++ ++P I S LSA A ++ L+ G+ +H ++
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 241 A--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+EG I S+LVDMY CG+++++ F+ + +R+L+ W ++I G + A+
Sbjct: 579 KGFFLEGPI--ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAI 636
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F++MT +P+++T + +L ACS +G + +G + F M Y ++P EHYAC+V
Sbjct: 637 ALFKKMTDE--NVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMV 694
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLL R+ ++ AY+ ++ MP++P+ VW ALL AC ++ ELG +AA L + D +SG
Sbjct: 695 DLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSG 754
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+ L+SN+FAA GRW + + VR MK G+KK GCSWI V N+IH F A+D SH + +
Sbjct: 755 KYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDD 814
Query: 479 IQAMLTKLREEM-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I L + + + K GYI T F ++V EEEK + HSE++AL +GL+ P G I
Sbjct: 815 IYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSI 874
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RITKNLRIC DCH+ FK S + R ++VRD NRFH F G CSC D+W
Sbjct: 875 RITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 189/373 (50%), Gaps = 11/373 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+QLHA LKS F+ MY K G DA K+FDEM ER + TWNA + V
Sbjct: 65 GQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVS 122
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+ AI+ + +R G D TF + L AC +LG ++HG V+ GF V V
Sbjct: 123 SGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFV 182
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGI-IDKND-VSWCSMLVVYVQNYEEENGCQMFLTARRE 206
CN L+ YGKC ++G A+V+FDGI ++K D VSW S++ +V + +F +
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEV 242
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV + + L + ++LG +H A+K+ +++V +AL+ MY KCG ++DA
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F M R+ V WN ++ G AL+ F +M + P+ V+++ +++A
Sbjct: 303 ERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQN--SAQKPDQVSVLNLIAASG 360
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR---AYEIIKEMPMRP-T 382
R+G + G ++ ++ ++ G+ + ++D+ + V A+E + E + T
Sbjct: 361 RSGNLLNGKEV-HAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWT 419
Query: 383 ISVWGALLNACRV 395
+ G N C +
Sbjct: 420 TIIAGYAQNECHL 432
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 194/397 (48%), Gaps = 5/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ ++ N +TF + G +H ALKS DV+V + MY+K G
Sbjct: 239 MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGR 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA+++F M R+ +WN +S V ++A++ F +++ + +PD ++ + A
Sbjct: 299 MEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAA 358
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L G+++H + +R+G D N+ + N L+D Y KC V F+ + +K+ +SW
Sbjct: 359 SGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISW 418
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y QN +F + +G++ MI SVL AC+ + R +H K
Sbjct: 419 TTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I + +A+V++YG+ G A AF + +++V W ++I H G AL
Sbjct: 479 RDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F + + P+ + ++ LSA + +++KG +I + ++ G + +VD+
Sbjct: 538 FYSLKQTNIQ--PDSIAIISALSATANLSSLKKGKEI-HGFLIRKGFFLEGPIASSLVDM 594
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G V+ + ++ + R I +W +++NA ++G
Sbjct: 595 YACCGTVENSRKMFHSVKQRDLI-LWTSMINANGMHG 630
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 189/401 (47%), Gaps = 7/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++ + TFP + KA AL G ++H +A+K G VFV + MY K G
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGD 195
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +FD M + + +WN+ IS V G+ A+ F ++ G + TF A L
Sbjct: 196 LGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAAL 255
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
D S ++LG +HG ++S +V V N L+ Y KC + A+ VF ++ ++ V
Sbjct: 256 QGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYV 315
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW ++L VQN + F + +P + ++++A R L G+ VHA A
Sbjct: 316 SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYA 375
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++ N+ +G+ L+DMY KC ++ AF M E++L+ W II GYA A+
Sbjct: 376 IRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAI 435
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F ++ + P + + VL ACS + ++ + K + A +V
Sbjct: 436 NLFRKVQVKGMDVDP--MMIGSVLRACSGLKS-RNFIREIHGYVFKRDLADIMLQNA-IV 491
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
++ G G D A + + + +S W +++ C G P
Sbjct: 492 NVYGEVGHRDYARRAFESIRSKDIVS-WTSMITCCVHNGLP 531
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 328/587 (55%), Gaps = 8/587 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN+FTF KA AL + G Q+H + +KSG VG + DMYSK G A+
Sbjct: 101 VKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAE 160
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F++MP RNL +WNA I+ G + ++ F ++ G PD TF + L AC
Sbjct: 161 QVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALG 220
Query: 126 LLQLGRQLHGFLVRSGFDGNVS--VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
++ G Q+H L+ GF ++ + + +VD Y KC + A+ VFD I KN +SW ++
Sbjct: 221 AIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSAL 280
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ + Q +F R F++S ++ A +A +E G+ +H +K
Sbjct: 281 IQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPS 340
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+I V ++++DMY KCG ++AE F++M RN+V W +I GY G + A+ F
Sbjct: 341 GLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNR 400
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M E + V + +LSACS +G + + + F + + +KP EHYAC+VD+LGR
Sbjct: 401 MQLDGIEL--DEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGR 458
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG + A +I+ M ++P +W LL+ACRV+G E+GR + LF++D ++ N+V++
Sbjct: 459 AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMM 518
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SN++A G W+E + VRK +K G+KK AG SW+ + IH F D +H +I ML
Sbjct: 519 SNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEML 578
Query: 484 TKLREEMK-AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI---AIPPGVPIRI 539
++ +K GY FAL+DVEEE K + HSEK+A+ L+ G IR+
Sbjct: 579 KEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRV 638
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+CGDCH K +S I+ + +VRD NRFHRF DG CSC DYW
Sbjct: 639 FKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 195/392 (49%), Gaps = 17/392 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G Q+HA A+ G D+ + DMY K D A +FD M ERN+ +W A + +
Sbjct: 23 GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G K ++ + +G +P+ TF L AC +++ G Q+HG V+SGF+ V
Sbjct: 83 EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVV 142
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N +D Y KC +G+A+ VF+ + +N VSW +M+ + +F + +G
Sbjct: 143 GNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGE 202
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI--FVGSALVDMYGKCGSIQDA 266
P +F +S L AC + + G +HA + +I + SA+VD+Y KCG + +A
Sbjct: 203 VPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEA 262
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY--VTLVCVLSA 324
+ F+++ ++NL+ W+A+I G+A +G+ A+ F ++ E+V N L ++
Sbjct: 263 QKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLR----ESVSNVDGFVLSIMMGV 318
Query: 325 CSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+ VE+G ++ Y + + G+ + ++D+ + GL + A + EM +R +
Sbjct: 319 FADLALVEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTEEAERLFSEMQVRNVV 376
Query: 384 SVWGALLNACRVYGKPELGRIAAD--NLFKLD 413
S W ++ YGK LG A N +LD
Sbjct: 377 S-WTVMITG---YGKHGLGEKAIHLFNRMQLD 404
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 143/277 (51%), Gaps = 4/277 (1%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L CS L G Q+H V GF ++ + N L+D YGKC+ V LA VFD ++++N
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +++ Y+Q + + GV+P +F S+ L AC + +E G +H
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ VK+ E VG+A +DMY KCG I AE FNKMP RNLV WNA+I G+ H+G+
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM-TLKYGIKPGAEHYA 355
+L F+ M VP+ T L AC GA+ G +I S+ T + I +
Sbjct: 190 SLVLFQRMQGQ--GEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIAS 247
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+VDL + G + A ++ + + IS W AL+
Sbjct: 248 AIVDLYAKCGYLFEAQKVFDRIEQKNLIS-WSALIQG 283
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++ +L C++ + G VHA AV ++ + + L+DMYGKC + A F++M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
ERN+V W A++ GY +G+A +L+ EM + PN T L AC G VE G
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVK--PNEFTFSTSLKACGALGVVENG 124
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
M+I + M +K G + + +D+ + G + A ++ +MP R +S W A++
Sbjct: 125 MQI-HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMI 178
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 3 RECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RE +S D F + + L + GKQ+H LK D+ V S DMY K GL
Sbjct: 301 RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLT 360
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
++A+++F EM RN+ +W I+ G + AI F ++ G E D + + A L+AC
Sbjct: 361 EEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420
Query: 122 SDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVS 179
S L++ ++ L + N+ +VD G+ ++ AK + + + + N+
Sbjct: 421 SHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI 480
Query: 180 WCSML 184
W ++L
Sbjct: 481 WQTLL 485
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 329/582 (56%), Gaps = 8/582 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+F +FK+ S GKQ H LK G I FV + MYS +A ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP---DLITFCAFLNACSDC 124
D++P +L+ +++ +S + G K +D LR+T E + +T+ + L S+
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGLDV---LRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L L Q+H +VR GF+ V C L++ YGKC +V A+ VFD +N +++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y Q+ E +F + V P ++ + +L++ A ++ L+ G +H + +K+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ VG+ALV+MY K GSI+DA AF+ M R++V WN +I G +H G AL +F+ M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+ +PN +T + VL ACS G VE+G+ F + K+ ++P +HY C+V LL +A
Sbjct: 431 --IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G+ A + ++ P+ + W LLNAC V LG+ A+ + PNDSG +VLLS
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLS 548
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N+ A + WE VR M + G+KK G SWI ++N+ H+F A+D H T I A +
Sbjct: 549 NIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVK 608
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
++ ++K GY PD A +DV+EE++ + +HSEK+A+A+GLI P P+ +TKN+R
Sbjct: 609 EVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVR 668
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IC DCHSA K IS I R +++RD+NRFH F DG CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 171/392 (43%), Gaps = 14/392 (3%)
Query: 20 SSALHIPVTGKQLHALAL---KSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
SS L I G+ +HA + +S + D + S ++Y K A K+FD MPERN+
Sbjct: 44 SSYLRI---GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+W A + G + F ++ +G P+ +CS+ ++ G+Q HG
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHG 160
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
++ G + V N LV Y C+ G A V D + + + S L Y++ +
Sbjct: 161 CFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKE 220
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
G + E + S L + + L L VH+ V+ + AL++
Sbjct: 221 GLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
MYGKCG + A+ F+ +N+ I+ Y + AL+ F +M + E PN
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK--EVPPNE 338
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
T +L++ + +++G + + + LK G + +V++ ++G ++ A +
Sbjct: 339 YTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 376 EMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
M R ++ W +++ C +G LGR A +
Sbjct: 398 GMTFRDIVT-WNTMISGCSHHG---LGREALE 425
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN++TF L + + L + G LH L LKSG + V VG + +MY+K+G
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K F M R++ TWN IS G + A++AF + TG P+ ITF L A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 121 CSDCSLLQLGRQLHGF 136
CS ++ G LH F
Sbjct: 449 CSHIGFVEQG--LHYF 462
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFLV---RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L C++ S L++G +H L+ +S + N L++ Y KC E A+ +FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGR 232
++N VSWC+M+ Y + + ++F + G P +F+ + V +C+ +E G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
H +K + + FV + LV MY C +A + +P +L +++ + GY G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
L + + + V N +T + L S + +++ +S +++G E
Sbjct: 217 AFKEGLDVLRKTANE--DFVWNNLTYLSSLRLFSNLRDLNLALQV-HSRMVRFGFNAEVE 273
Query: 353 HYACVVDLLGRAGLVDRAYEIIKE 376
++++ G+ G V A + +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDD 297
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 215 ISSVLSACARIAGLELGRSVHA---VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
++ +L CA + L +G S+HA V ++ + + ++L+++Y KC A F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
MPERN+V W A++ GY + G L F+ M E+ PN V +CS +G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF-FSGESRPNEFVATVVFKSCSNSGRI 152
Query: 332 EKGMKIFYSMTLKYGI 347
E+G K F+ LKYG+
Sbjct: 153 EEG-KQFHGCFLKYGL 167
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 327/570 (57%), Gaps = 18/570 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQ+H + K G VG S DMYSK G+ +A ++F+ +P RN+ +WNA I+
Sbjct: 23 GKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTN 82
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD--GNV 146
+ A++ F +R G PD T+ + L ACS G Q+H L+R GF
Sbjct: 83 ERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQS 142
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
+V LVD Y KC + A+ VFD I +K+ +SW ++++ Y Q + +F R
Sbjct: 143 AVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRES 202
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVK---ACVEGNIFVGSALVDMYGKCGSI 263
F++SS++ A A LE G+ +HA +K +E + V ++++DMY KCG
Sbjct: 203 RHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLE--MSVANSVLDMYMKCGLT 260
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+A+ F +M ERN+V W +I GY G + A+ F EM E P+ VT + VLS
Sbjct: 261 VEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIE--PDSVTYLAVLS 318
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS +G +++G K F + IKP EHYAC+VDLLGR G + A +I++MP++P +
Sbjct: 319 ACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNV 378
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W LL+ CR++G E+G+ + L + + N+ N+V++SNM+A G W+E++ +R+ +
Sbjct: 379 GIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETL 438
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA-GYIPDTNFA 502
K G+KK AG SW+ + IHIF D H EI +L ++ + +K GY+ NF+
Sbjct: 439 KRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFS 498
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP------IRITKNLRICGDCHSAFKFI 556
L+DVEEE KM + HSEK LA GL+ + G+ IRI KNLR+CGDCH+ K +
Sbjct: 499 LHDVEEESKMESLRVHSEK--LAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGL 556
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S ++ +VRD NRFHRF +G CSC DYW
Sbjct: 557 SKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 10/302 (3%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
LN CS LL G+Q+HG + + GFD V N ++D Y KC VG A VF+ + +N
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW +M+ Y E +F R +G P + SS L AC+ G +HA
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129
Query: 237 VAVKACVE--GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
++ V ALVD+Y KC + +A F+++ E++++ W+ +I GYA + +
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEH 353
A+ F E+ R + +V L ++ + +E+G ++ Y++ + YG+ +
Sbjct: 190 KEAMDLFRELRESR-HRMDGFV-LSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVA 247
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+ V+D+ + GL A + +EM R +S W ++ YGK +G A + ++
Sbjct: 248 NS-VLDMYMKCGLTVEADALFREMLERNVVS-WTVMITG---YGKHGIGNKAVELFNEMQ 302
Query: 414 PN 415
N
Sbjct: 303 EN 304
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 25/397 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG--QIHDVFVGCSAFDMYSKT 58
MR + P+ +T+ KA S G Q+HA ++ G + V + D+Y K
Sbjct: 96 MREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKC 155
Query: 59 GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+A K+FD + E+++ +W+ I K A+D F LR + D + +
Sbjct: 156 RRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSII 215
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFD-GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+D +LL+ G+Q+H + ++ + +SV N ++D Y KC A +F ++++N
Sbjct: 216 GVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNV 275
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW M+ Y ++ ++F + G+EP +VLSAC+ ++ G+ ++
Sbjct: 276 VSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSI 335
Query: 238 -----AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQ 291
+K VE + +VD+ G+ G +++A+ KMP + N+ W ++
Sbjct: 336 LCSNQKIKPKVEHY----ACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMH 391
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G +M E + NYV V + + AG ++ KI ++ K G+K A
Sbjct: 392 GDVEMGKQVGEILLRREGNNPANYVM---VSNMYAHAGYWKESEKIRETLKRK-GLKKEA 447
Query: 352 EHYACVVDLL--------GRAGLVDRAYEIIKEMPMR 380
+D G L++ +E++KEM R
Sbjct: 448 GRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKR 484
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+++ +L+ C++ L+ G+ VH V K + VG++++DMY KCG + +A FN +
Sbjct: 6 LLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL 65
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
P RN++ WNA+I GY ++ + + AL+ F EM VP+ T L ACS A A +
Sbjct: 66 PVRNVISWNAMIAGYTNERNGEEALNLFREMREK--GEVPDGYTYSSSLKACSCADAAGE 123
Query: 334 GMKIFYSMTLKYGIKPGAEH--YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
GM+I ++ +++G A+ +VDL + + A ++ + + +S W L+
Sbjct: 124 GMQI-HAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMS-WSTLI- 180
Query: 392 ACRVYGKPELGRIAADNL 409
LG DNL
Sbjct: 181 ---------LGYAQEDNL 189
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/591 (35%), Positives = 333/591 (56%), Gaps = 12/591 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ + L AS + GK++HA A+++G ++ +G + DMY+K
Sbjct: 340 MQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCC 399
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
F+ M E++L +W I+ AI+ F ++ G + D + + L A
Sbjct: 400 VKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS R++HG++ + ++ + N +V+ YG+ + A+ F+ I K+ VSW
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSW 518
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ V N ++F + ++ ++P I S LSA A ++ L+ G+ +H ++
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 241 A--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+EG I S+LVDMY CG+++++ F+ + +R+L+ W ++I G + A+
Sbjct: 579 KGFFLEGPI--ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAI 636
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F++MT +P+++T + +L ACS +G + +G + F M Y ++P EHYAC+V
Sbjct: 637 ALFKKMTDQ--NVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMV 694
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLL R+ ++ AY ++ MP++P+ +W ALL AC ++ ELG +AA L + D +SG
Sbjct: 695 DLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSG 754
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+ L+SN+FAA GRW + + VR MK G+KK GCSWI V N+IH F A+D SH + +
Sbjct: 755 KYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDD 814
Query: 479 IQ---AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
I A TKL E K GYI T F ++V EEEK + HSE++AL +GL+ P G
Sbjct: 815 IYLKLAQFTKLLE--KKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGT 872
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRITKNLRIC DCH+ FK S + R ++VRD NRFH F G CSC D+W
Sbjct: 873 CIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 195/385 (50%), Gaps = 12/385 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+QLHAL LKS F+ MY K G DA K+FDEM ER + +WNA + V
Sbjct: 65 GQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVS 122
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+ AI+ + ++R G D TF + L AC +LG ++HG V+ G+ V V
Sbjct: 123 SGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFV 182
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGI-IDKND-VSWCSMLVVYVQNYEEENGCQMFLTARRE 206
CN L+ YGKC ++G A+V+FDGI ++K D VSW S++ +V +F +
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEV 242
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
GV + + L + ++LG +H +K+ +++V +AL+ MY KCG ++DA
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F M R+ V WN ++ G AL+ F +M + + P+ V+++ +++A
Sbjct: 303 GRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK--PDQVSVLNLIAASG 360
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
R+G + KG ++ ++ ++ G+ + +VD+ + V + M + IS W
Sbjct: 361 RSGNLLKGKEV-HAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLIS-W 418
Query: 387 GALLNACRVYGKPELGRIAADNLFK 411
++ Y + E + A NLF+
Sbjct: 419 TTIIAG---YAQNEF-HLEAINLFR 439
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 194/397 (48%), Gaps = 5/397 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ ++ N +TF + G +H LKS DV+V + MY+K G
Sbjct: 239 MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGR 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F+ M R+ +WN +S V +A++ F +++ +G +PD ++ + A
Sbjct: 299 MEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAA 358
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
L G+++H + +R+G D N+ + N LVD Y KC V F+ + +K+ +SW
Sbjct: 359 SGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISW 418
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y QN +F + +G++ MI SVL AC+ + R +H K
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ +I + +A+V++YG+ G I A AF + +++V W ++I H G AL
Sbjct: 479 RDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F + + P+ + ++ LSA + +++KG +I + ++ G + +VD+
Sbjct: 538 FYSLKQTNIQ--PDSIAIISALSATANLSSLKKGKEI-HGFLIRKGFFLEGPIASSLVDM 594
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
G V+ + ++ + R I +W +++NA ++G
Sbjct: 595 YACCGTVENSRKMFHSVKQRDLI-LWTSMINANGMHG 630
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 191/401 (47%), Gaps = 7/401 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR ++ + TFP + KA AL G ++H +A+K G VFV + MY K G
Sbjct: 136 MRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGD 195
Query: 61 KDDADKMFD--EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +FD M + + +WN+ IS V G A+ F ++ G + TF A L
Sbjct: 196 LGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAAL 255
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
D S ++LG +HG +++S +V V N L+ Y KC + A VF+ ++ ++ V
Sbjct: 256 QGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYV 315
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW ++L VQN + F + G +P + ++++A R L G+ VHA A
Sbjct: 316 SWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYA 375
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
++ ++ N+ +G+ LVDMY KC ++ AF M E++L+ W II GYA A+
Sbjct: 376 IRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAI 435
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F ++ + P + + VL ACS + ++ + K + A +V
Sbjct: 436 NLFRKVQVKGMDVDP--MMIGSVLRACSGLKS-RNFIREIHGYVFKRDLADIMLQNA-IV 491
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
++ G G +D A + + + +S W +++ C G P
Sbjct: 492 NVYGEVGHIDYARRAFESIRSKDIVS-WTSMITCCVHNGLP 531
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 159/347 (45%), Gaps = 31/347 (8%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+ C L G+QLH L++S ++ LV YGKC + A VFD + ++
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSHLSAFLA--TKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW +++ +V + + +++ R GV SVL AC + LG +H
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN--KMPERNLVCWNAIIGGYAHQGHA 294
VAVK +FV +AL+ MYGKCG + A + F+ M + + V WN+II + +G+
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
ALS F M + N T V L V+ GM I +G + H+
Sbjct: 230 LEALSLFRRMQEV--GVASNTYTFVAALQGVEDPSFVKLGMGI-------HGAVLKSNHF 280
Query: 355 A------CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
A ++ + + G ++ A + + M R +S W LL+ + EL A N
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVS-WNTLLSGLV---QNELYSDAL-N 335
Query: 409 LFKLDPNDSG---NHVLLSNMFAATGRWEEADLVR-KEMKDVGIKKG 451
F+ D +SG + V + N+ AA+GR +L++ KE+ I+ G
Sbjct: 336 YFR-DMQNSGQKPDQVSVLNLIAASGR--SGNLLKGKEVHAYAIRNG 379
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/652 (36%), Positives = 353/652 (54%), Gaps = 89/652 (13%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F +P L K++ G HA LK G D FV + DMY++ G A
Sbjct: 96 VRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHAR 150
Query: 66 KMFDE---------------------------------MPERNLATWNAYIS-------- 84
K+FDE MPERN+ TW A ++
Sbjct: 151 KVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDL 210
Query: 85 ------------------NAVLGGRPKN-----AIDAFINLRRTGGEPDLITFCAFLNAC 121
NA+L G +N A+ F + G EPD T+ ++AC
Sbjct: 211 EAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISAC 270
Query: 122 SD----CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
S C L R LH + N V L+D Y K ++ A+ +F+ + +N
Sbjct: 271 SSRGDPCLAASLVRTLH----QKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNV 326
Query: 178 VSWCSMLVVYVQNYEEENGCQMF---LTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
V+W SM+ Y QN + ++F +TA++ + P + + SV+SAC + LELG V
Sbjct: 327 VTWNSMIAGYAQNGQSAMAIELFKEMITAKK--LTPDEVTMVSVISACGHLGALELGNWV 384
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ ++ +I +A++ MY +CGS++DA+ F +M R++V +N +I G+A GH
Sbjct: 385 VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHG 444
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A++ M E P+ VT + VL+ACS AG +E+G K+F S+ P +HY
Sbjct: 445 VEAINLMSTMKEGGIE--PDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHY 497
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
AC+VDLLGR G ++ A ++ MPM P V+G+LLNA R++ + ELG +AA+ LF+L+P
Sbjct: 498 ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEP 557
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
++SGN +LLSN++A+ GRW++ + +R+ MK G+KK G SW+ ++H F D SHE
Sbjct: 558 DNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHE 617
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
R+ +I +L +LR++M+ AGYI D + L DVEEEEK VG HSEK+A+ + L+ G
Sbjct: 618 RSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAG 677
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+C DCH+A K IS + GR +IVRDNNRFH F DG CSC DYW
Sbjct: 678 AVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/593 (37%), Positives = 334/593 (56%), Gaps = 23/593 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P+ +F + ++ + G+ H +K G +D+ + D Y+K G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F MP R++ NA IS G + A + F N+ N+
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER-------------NS 107
Query: 121 CSDCSLLQLGRQLHGF-LVRSGFDGN----VSVCNGLVDFYGKCNEVGLAKVVFDGIID- 174
CS S++ +L R FD N V N ++D Y K ++ A+ +F +
Sbjct: 108 CSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSA 167
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N V+W +M+ YVQ E MF + E V+P + + S+LSACA + L++G +
Sbjct: 168 RNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 227
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H ++ ++ +G+AL+DMY KCG+++ A F+ + +N+ CWN+II G G
Sbjct: 228 HGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRG 287
Query: 295 DMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ A+++F M E + P+ VT V +LS CS +G + G + F M YG++PG EH
Sbjct: 288 EEAIAAF---IVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEH 344
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y C+VDLLGRAG + A E+I+ MPM+P V G+LL AC+++ +LG L +LD
Sbjct: 345 YGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P D GN+V LSN++A+ RW++ + RK M G+ K GCS I V N +H F A DTSH
Sbjct: 405 PCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSH 464
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ T+I A L ++ +E+K G++P+T L+D+EEEEK + +HSE+IA+AFGL++ PP
Sbjct: 465 PQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPP 524
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IR+ KNLR C DCHSA K IS RE+IVRD RFH F +G CSC+DYW
Sbjct: 525 GKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/612 (35%), Positives = 334/612 (54%), Gaps = 35/612 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN FTFP LFKA+S L + G LH + +K+ D+F+ S + Y +G D A ++
Sbjct: 171 PNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRV 230
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F MP +++ +WNA I+ LGG P A+ F + +P++IT + L+AC+ L
Sbjct: 231 FTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDL 290
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML--- 184
+ GR + ++ +GF ++ + N ++D Y KC + AK +F+ + +K+ VSW +ML
Sbjct: 291 EFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGH 350
Query: 185 ------------------------VVYVQNYEEENGCQMFLTARRE-----GVEPKDFMI 215
+ YE+ ++ L+ E +P + +
Sbjct: 351 AKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTL 410
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
L A A++ ++ G +H K + N + ++L+DMY KCG++ A F+ +
Sbjct: 411 ICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVER 470
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+++ W+A+IG A G AL F M + PN VT +L AC+ AG V +G
Sbjct: 471 KDVYVWSAMIGALAMYGQGKAALDLFSSM--LEAYIKPNAVTFTNILCACNHAGLVNEGE 528
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
++F M YGI P +HY CVVD+ GRAGL+++A I++MP+ PT +VWGALL AC
Sbjct: 529 QLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSR 588
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G EL +A NL +L+P + G VLLSN++A G WE+ +RK M+D +KK CS
Sbjct: 589 HGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCS 648
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE- 514
I V +H F D SH + +I + L ++ E+ K GY PD + L EE+ M +
Sbjct: 649 SIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQS 708
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ HSEK+A+AFGLI+ PIRI KN+RICGDCH+ K +S + R++++RD RFH
Sbjct: 709 LNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHH 768
Query: 575 FWDGYCSCSDYW 586
F G CSC DYW
Sbjct: 769 FRGGKCSCLDYW 780
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 8/198 (4%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG--KCGS 262
+G E + I + C L + +HA ++ + + S L+ Y C
Sbjct: 65 EKGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC 121
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A+ FN++P+ NL CWN +I GYA + F M C PN T +
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLH-SCSEFPNKFTFPFLF 180
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
A SR + G + + M +K + +++ G +G D A+ + MP +
Sbjct: 181 KAASRLKVLHLG-SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDV 239
Query: 383 ISVWGALLNACRVYGKPE 400
+S W A++NA + G P+
Sbjct: 240 VS-WNAMINAFALGGLPD 256
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/594 (38%), Positives = 332/594 (55%), Gaps = 39/594 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM--FDEMPERNLATWNAYISNAV 87
KQ+HA L +G +V +K + D + F+++ N +NA I +
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYL 122
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG-FLVRSGFDGNV 146
+ R K + + + +R+ G P TF A AC + LGRQ+HG ++ GF ++
Sbjct: 123 IEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDL 182
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV------------------ 188
V N ++D Y KC + + VFD + +++ +SW ++ YV
Sbjct: 183 HVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVK 242
Query: 189 -------------QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
QN + F + GVE + + V+SACA++ + +
Sbjct: 243 DMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIR 302
Query: 236 AVAVKACVEG--NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VA K+ G ++ VGSAL+DMY KCGS+ DA F M ERN+ ++++I G+A G
Sbjct: 303 DVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGR 362
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A+ F+EM ++ E PN VT + VL+ACS AG VE+G +IF M YGIKP A+H
Sbjct: 363 VHDAMKLFDEM--VKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADH 420
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y C+VDLLGRAG + A+E++K MP+ P VWGALL ACR++ P++ IAA++LF+L+
Sbjct: 421 YTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELE 480
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI-SVKNRIHIFQAKDTS 472
P GN++LL+N++A+ GRW + VRK M+ G++K SWI S K +H F + D +
Sbjct: 481 PYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMT 540
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R+ EI+ L L + ++A GY P + YDV +E+K + HSEK+ALAFGLI+
Sbjct: 541 HPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTI 600
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG IRI KNLRIC DCHS S I GRE+IVRD RFH F DG CSC ++W
Sbjct: 601 PGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 162/380 (42%), Gaps = 36/380 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTG 59
MR+E + P FTF LFKA A G+Q+H + G D+ VG S DMY K G
Sbjct: 137 MRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCG 196
Query: 60 L-------------------------------KDDADKMFDEMPERNLATWNAYISNAVL 88
+ A ++FD +P +++ W +S
Sbjct: 197 FLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQ 256
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+P+ AI F ++ G E D IT ++AC+ + + +S F G SV
Sbjct: 257 NAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSV 316
Query: 149 CNG--LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
G L+D Y KC VG A VF G+ ++N S+ SM++ + + + ++F +
Sbjct: 317 VVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKT 376
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQD 265
++P VL+AC+ +E G + + K ++ + + +VD+ G+ G +Q+
Sbjct: 377 EIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQE 436
Query: 266 AEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
A MP E + W A++G D+A + + + + NY+ L + ++
Sbjct: 437 AHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYAS 496
Query: 325 CSRAGAVEKGMKIFYSMTLK 344
C R V K+ + L+
Sbjct: 497 CGRWNDVSTVRKLMRTRGLR 516
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV--GLAKVVFDGIIDKNDVSWC 181
C L +Q+H ++ +G D + V L+ K N +F+ + N +
Sbjct: 56 CKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYN 115
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ Y+ + + + R+EGV P F +++ AC + LGR +H +
Sbjct: 116 ALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILV 175
Query: 242 CVEG-NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH------- 293
G ++ VG++++DMY KCG ++ F++MP R+++ W +I Y G+
Sbjct: 176 GGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGEL 235
Query: 294 ------ADM------------------ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
DM A+ FE+M E + +TL+ V+SAC++ G
Sbjct: 236 FDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVET--DEITLIGVISACAQLG 293
Query: 330 AVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
A + I + ++G K + ++D+ + G V AY + + M R S
Sbjct: 294 AAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSM 353
Query: 389 LL 390
+L
Sbjct: 354 IL 355
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 15/239 (6%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI--AFNK 272
I + L C + + + VHA + ++ + +V + L+ K D FN+
Sbjct: 49 IVTTLDGCKNLTQI---KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAV 331
+ N +NA+I GY + + S E + MR E V P T + AC V
Sbjct: 106 VNYPNPFLYNALIRGYLIE---ERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDV 162
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G +I L G ++D+ + G ++ ++ EMP R IS W L++
Sbjct: 163 GLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVIS-WTELIS 221
Query: 392 ACRVYGKPELGRIAADNLFK-LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
A G E +A LF L D ++ + FA + EA + ++M++ G++
Sbjct: 222 AYVKSGNME----SAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVE 276
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 319/566 (56%), Gaps = 29/566 (5%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK-----DDADKMFDEMPERNLATWNAYIS 84
KQ+HA L++G D F SA + + L D A ++FD++P NL TWN I
Sbjct: 52 KQIHAQMLRTGLFFDPF---SASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 85 NAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
P ++ F+ L ++ PD TF + A S+ L G+ HG +++
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+V + N L+ FY KC E+GL VF ++ VSW SM+ +VQ E ++F
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ V+P + VLSACA+ + E GR VH+ + + ++ + +A++DMY KCGS+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSV 288
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAH------------QGHADMALSSFEEMTSMRCEA 311
+DA+ F+KMPE+++V W ++ GYA GH A++ F +M + +
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVK- 347
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
PN VT +L ACS G VE+G F M L YG+ PG +HYAC+VD+LGRAGL++ A
Sbjct: 348 -PNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAV 406
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
E+I++MPM P SVWGALL AC ++ L A L +L+P + G +VLLSN++A G
Sbjct: 407 ELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAG 466
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+W+ +RK M+DVG+KK GCS I V +H F D SH +I A L ++ ++
Sbjct: 467 KWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLE 526
Query: 492 AAGYIPDTNFALYDVEEEE-KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
GY+P+ + L VEEE+ K + HSEK+A+AFGLI+ PIRI KNLR+CGDCH
Sbjct: 527 TIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCH 586
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFW 576
S K +S + RE+++RD R W
Sbjct: 587 SVAKLVSKLYDREILLRD-----RVW 607
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 19/337 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FTFP L KA+S L TGK H + +K DVF+ S Y+K G ++
Sbjct: 134 PDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRV 193
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F P R++ +WN+ I+ V GG P+ A++ F + +P+ IT L+AC+ S
Sbjct: 194 FVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
+ GR +H ++ R+ ++++ N ++D Y KC V AK +FD + +K+ VSW +MLV Y
Sbjct: 254 EFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313
Query: 188 VQ--NYEEENGCQM----------FLTARREGVEPKDFMISSVLSACARIAGLELGRS-V 234
+ Y+ G M F + + V+P +++L AC+ + +E GR+
Sbjct: 314 AKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFF 373
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV-CWNAIIGGYAHQGH 293
+ + + V + + +VD+ G+ G +++A KMP W A++G A H
Sbjct: 374 NQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLG--ACTIH 431
Query: 294 ADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAG 329
++ L+ E+ S E P N+ V + + ++AG
Sbjct: 432 ENVVLA--EQACSQLIELEPGNHGAYVLLSNIYAKAG 466
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN T + A + G+ +H+ ++ + + + DMY+K G
Sbjct: 228 METQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGS 287
Query: 61 KDDADKMFDEMPERNLATWNAYI------------SNAVLGGRPKNAIDAFINLRRTGGE 108
+DA ++FD+MPE+++ +W + + G K+AI F ++ +
Sbjct: 288 VEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVK 347
Query: 109 PDLITFCAFLNACSDCSLLQLGR 131
P+ +TF L ACS L++ GR
Sbjct: 348 PNAVTFTNILCACSHVGLVEEGR 370
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 321/559 (57%), Gaps = 6/559 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +++G D F+ SK D A ++F N+ + A I V G
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+AI + + PD + L AC L+ GR++H ++ G N V
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170
Query: 152 LVDFYGKCNEVGLAKVVFD----GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+++ YGKC E+G A+ VF+ ++ K+ V W +M+ +V+N E + F + E
Sbjct: 171 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN 230
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P +F I VLSAC+++ LE+GR VH+ K +E N+FVG+AL++MY +CGSI +A+
Sbjct: 231 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 290
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M +R+++ +N +I G + G + A+ F M R P VT V VL+ACS
Sbjct: 291 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLR--PTNVTFVGVLNACSH 348
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V+ G KIF+SMT YG++P EHY C+VDLLGR G ++ AY++I+ M M P + G
Sbjct: 349 GGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 408
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL+AC+++ ELG A L DSG +VLLS+++A++G+W+EA VR +MK+ G
Sbjct: 409 TLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 468
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K GCS I V N IH F D H R I L +L ++ GY P+ L D+E
Sbjct: 469 MQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 528
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+ EK + HSE++A+ +GLI+ P IR+ KNLR+C DCHSA K I+ I R+V+VR
Sbjct: 529 DGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVR 588
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F +G CSC DYW
Sbjct: 589 DRNRFHYFENGACSCGDYW 607
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 5/271 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+++ + KA + G+++H+ ALK G + V ++Y K G
Sbjct: 121 MLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGE 180
Query: 61 KDDADKMFDEMPE----RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
DA ++F+EMPE ++ W A I V A++AF ++ P+ T
Sbjct: 181 LGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVC 240
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+ACS L++GR +H ++ + + N+ V N L++ Y +C + A+ VFD + D++
Sbjct: 241 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 300
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-H 235
+++ +M+ N + ++F + P + VL+AC+ ++ G + H
Sbjct: 301 VITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFH 360
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++ VE I +VD+ G+ G +++A
Sbjct: 361 SMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 391
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN+FT C+ A S L G+ +H+ K ++FVG + +MYS+ G
Sbjct: 226 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGS 285
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +FDEM +R++ T+N IS + G+ + AI+ F + P +TF LNA
Sbjct: 286 IDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNA 345
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L+ G ++ + R G + + +VD G+ VG + +D I
Sbjct: 346 CSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGR---VGRLEEAYDLI------- 395
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
R + P M+ ++LSAC LELG V V
Sbjct: 396 ------------------------RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLE 431
Query: 240 -KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+ + +V L +Y G ++A KM E
Sbjct: 432 DRGQADSGTYV--LLSHVYASSGKWKEAAQVRAKMKE 466
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 324/580 (55%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN TF A S+ + G+ +HA+ L+ + + +G S MYSK +D +++
Sbjct: 346 PNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERV 405
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SL 126
F+ MP ++ + N NA+ F +R TG +P+ IT C L
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDL 465
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G LH ++ ++G + + N L+ Y C ++ + +F I +K+ +SW +++
Sbjct: 466 HSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAA 525
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
V++ E ++F+ ++ G + F ++ LS+ A +A LE G +H ++VK ++ +
Sbjct: 526 NVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCD 585
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V +A +DMYGKCG + R CWN +I GYA G+ A +F+ M S
Sbjct: 586 SHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVS 645
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ + P+YVT V +LSACS AG ++KGM + SM +G+ PG +H C+VDLLGR G
Sbjct: 646 VGQK--PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGK 703
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
A + I EMP+ P +W +LL++ R + ++GR AA NL +LDP D +VLLSN+
Sbjct: 704 FAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNL 763
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A RW + D +R MK + + K CSW+ +KN + F D SH +I L ++
Sbjct: 764 YATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEI 823
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+++ GY+ DT+ AL+D +EE+K + +HSEK+ALA+GL+ +P G IRI KNLR+C
Sbjct: 824 LLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVC 883
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH FK +S + RE+++RD RFH+F G CSCSD+W
Sbjct: 884 ADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 219/495 (44%), Gaps = 30/495 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E + N + AL V G Q+ A + SG + V V S M+
Sbjct: 136 MRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRR 195
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+++FD M ER+ +WNA IS ++R +PD+ T C+ ++
Sbjct: 196 VQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSV 255
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+ LG +H V SG +V + N LV+ Y ++ A+ +F + ++ +SW
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVE-----PKDFMISSVLSACARIAGLELGRSVH 235
+M+ YVQ+ N C L + ++ P SS L AC+ L GR++H
Sbjct: 316 NTMISSYVQS----NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIH 371
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A+ ++ ++ + +G++L+ MY KC S++D E F MP ++V N + GGYA
Sbjct: 372 AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVA 431
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ F M + PNY+T++ + C G + ++ + G+
Sbjct: 432 NAMRVFSWMRGTGIK--PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITN 489
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
++ + G ++ + I + + IS W A++ A +G+ E A LF +D
Sbjct: 490 SLITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHGRGE----EAIKLF-MDSQ 543
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI----HIFQAKDT 471
+GN + R+ A+ + +++G +SVKN + H+ A
Sbjct: 544 HAGNKL---------DRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMD 594
Query: 472 SHERNTEIQAMLTKL 486
+ + ++ ML L
Sbjct: 595 MYGKCGKMDCMLKTL 609
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +HAL ++G + +V++G + +Y GL +A ++F EMP+RN+ +W A +
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A+ A+ +R+ G + ++ C G Q+ +V SG +VSV
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG- 207
N L+ +G V A+ +FD + +++ +SW +M+ +Y E + C + L+ R G
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHE-EVYSKCFIVLSDMRHGE 241
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+P + S++S CA + LG +H++ V + + ++ + +ALV+MY G + +AE
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAE 301
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F M R+++ WN +I Y AL + ++ E PN +T L ACS
Sbjct: 302 SLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTD-EGPPNSMTFSSALGACSS 360
Query: 328 AGAVEKGMKIFYSMTLKYGIK 348
A+ G I ++M L+ ++
Sbjct: 361 PEALMNGRTI-HAMILQRSLQ 380
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 190/403 (47%), Gaps = 14/403 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ T L ++ + G +H+L + SG V + + +MYS G
Sbjct: 237 MRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGK 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLN 119
D+A+ +F M R++ +WN IS+ V A++ L +T G P+ +TF + L
Sbjct: 297 LDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALG 356
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
ACS L GR +H +++ + + N L+ Y KCN + + VF+ + DV
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFES-MPCYDVV 415
Query: 180 WCSMLV-VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-LGRSVHAV 237
C++L Y + N ++F R G++P + ++ C + L G +HA
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAY 475
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ + + ++ ++L+ MY CG ++ + F+++ ++++ WNAII G + A
Sbjct: 476 VTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEA 535
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCV---LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ F M + N + C+ LS+ + ++E+GM++ + +++K G+ +
Sbjct: 536 IKLF-----MDSQHAGNKLDRFCLAECLSSSANLASLEEGMQL-HGLSVKNGLDCDSHVV 589
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+D+ G+ G +D + + + RPT W L++ YG
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPT-QCWNTLISGYARYG 631
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 172/390 (44%), Gaps = 22/390 (5%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ-- 128
MP R ++W +S G A +R + + AC +
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 129 -LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G +H R+G GNV + L+ YG V A+ +F + +N VSW +++V
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
N E + R+EGV +++V+S C + G V A V + + ++
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++L+ M+G +QDAE F++M ER+ + WNA+I Y+H+ ++ F ++ M
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHE---EVYSKCFIVLSDM 237
Query: 308 R-CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
R E P+ TL ++S C+ + V G I +S+ + G+ +V++ AG
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGI-HSLCVSSGLHCSVPLINALVNMYSTAGK 296
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG--NHVLLS 424
+D A + + M R IS W ++++ Y + A + L +L D G N + S
Sbjct: 297 LDEAESLFRNMSRRDVIS-WNTMISS---YVQSNSCVEALETLGQLLQTDEGPPNSMTFS 352
Query: 425 NMFAA--------TGRWEEADLVRKEMKDV 446
+ A GR A ++++ +++V
Sbjct: 353 SALGACSSPEALMNGRTIHAMILQRSLQNV 382
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 301/498 (60%), Gaps = 3/498 (0%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G + A+ ++ + EP F L AC+D L +GR +H +V+S + V
Sbjct: 9 GFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPDQVVN 68
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
NGL+ Y +C VFD + ++N SW S++ +V+ + +F +REG+
Sbjct: 69 NGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMG 128
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
++++L CAR+ L G+ +HA VK+ ++ V ++LVDMY KCG +
Sbjct: 129 FSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRL 188
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ M ++L WN ++ GYA G+ +A+ F EM S C P+ VT + +LS CS AG
Sbjct: 189 FDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMAS--CGIRPDDVTFIALLSGCSHAG 246
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
E G K+F+ M + +G+ P EHYAC+VD+LGRAG +D A ++K MPM+ + S+WG+L
Sbjct: 247 LTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSL 306
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
LN+CR++ + L A+ LF+L+P + GN+V+LSN++A G W+ ++VR+ M+ I+
Sbjct: 307 LNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIR 366
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNT-EIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
K AGCSWI VKN+IH F A RN+ E + + KLRE M+ GYIP+T+ L+DV E
Sbjct: 367 KEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNE 426
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E K V HSE++A F LI G+PIRITKNLR+C DCHS K +S + GR +++RD
Sbjct: 427 ETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRD 486
Query: 569 NNRFHRFWDGYCSCSDYW 586
NRFH F +G CSC+DYW
Sbjct: 487 TNRFHHFKEGACSCNDYW 504
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 1/278 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M C+ P +F F KA + L G+ +HA +KS + D V +Y++
Sbjct: 21 MLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPDQVVNNGLLRLYTQCEC 80
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++ K+FD+MPERN+A+WN+ IS V + A+D F ++R G +T L
Sbjct: 81 FNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPI 140
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L G+++H +V+S +V V N LVD Y KC V + +FDG+ K+ SW
Sbjct: 141 CARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSW 200
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAV 239
+ML Y N +F G+ P D ++LS C+ E G+ + H + +
Sbjct: 201 NTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEM 260
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
V ++ + LVDM G+ G I A + MP +
Sbjct: 261 DFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKT 298
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE + + T + + + ++GK++HA +KS + DV V S DMY K G+
Sbjct: 122 MQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGV 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D ++FD M ++L +WN ++ + G + A+D F + G PD +TF A L+
Sbjct: 182 VDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSG 241
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L + G++L H + G ++ LVD G+ + A VV + K S
Sbjct: 242 CSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGS 301
Query: 180 -WCSML 184
W S+L
Sbjct: 302 IWGSLL 307
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 325/599 (54%), Gaps = 17/599 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALAL----------KSGQIHDVFVGCS 50
M+ + PN T L + G +HA + KS V +G +
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--- 107
DMY+K G A ++FD MP RN TW+A I VL R A F + G
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
P I + L AC+ L++G QLH L +SG +++ N L+ Y K + A
Sbjct: 224 SPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+FD + K+ VS+ +++ YVQN E +F + VEP + S++ AC+ +A
Sbjct: 282 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L+ GR H + + + +AL+DMY KCG I + FN MP R++V WN +I G
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G A + F EM ++ P+ VT +C+LSACS +G V +G F+ M YG+
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFP--PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGL 459
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P EHY C+VDLL R G +D AYE I+ MP+R + VW ALL ACRVY +LG+ +
Sbjct: 460 TPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSR 519
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
+ +L P +GN VLLSN+++A GR++EA VR K G KK GCSWI + +H F
Sbjct: 520 MIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFV 579
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D SH ++ EI L + +K GY PDT+F L D+EEEEK + HSEK+A+A+G
Sbjct: 580 GGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYG 639
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++++ I +TKNLR+CGDCH+ K IS + R +IVRD NRFH F +G CSC D+W
Sbjct: 640 ILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 209/433 (48%), Gaps = 26/433 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN++TFP KA SAL G+ +H A+ +G D+FV + DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFL 118
DA +F MP R+L WNA ++ G +A+ ++++ P+ T A L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN----------VSVCNGLVDFYGKCNEVGLAKVV 168
+ L G +H + +R+ N V + L+D Y KC + A+ V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARI 225
FD + +N+V+W +++ +V +F +G + P I+S L ACA +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASL 238
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L +G +HA+ K+ V ++ G++L+ MY K G I A F++M ++ V ++A++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY G A+ A F++M + C P+ T+V ++ ACS A++ G S+ ++
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQA--CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR- 355
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G+ ++D+ + G +D + ++ MP R +S W ++ YG LG+
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAG---YGIHGLGK-E 410
Query: 406 ADNLFKLDPNDSG 418
A LF L+ N+ G
Sbjct: 411 ATALF-LEMNNLG 422
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/584 (37%), Positives = 318/584 (54%), Gaps = 41/584 (7%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+ECI + ++ + +A L P G++LH LK G D+FV + +MY+K G +
Sbjct: 98 QECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIE 157
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A + DEM +L +N ++ V G A D F + E DL+++
Sbjct: 158 IARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRM----PERDLVSW-------- 205
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
N ++ + +VG AK +FD +++ +SW S
Sbjct: 206 ---------------------------NTMIHGHASLGDVGTAKKLFDRTCERDLISWSS 238
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
M+ Y + + ++F + V P + SVLSAC + L +G+ +H +
Sbjct: 239 MIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNR 298
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+E ++ +G++LVDMY KCG I ++ FN M R++ W+A+I G A+ G ++AL F
Sbjct: 299 IEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFS 358
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M S + PN VT + VLSACS G V++G F SM+ Y + P EHY CVVD+LG
Sbjct: 359 KMISEDIK--PNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RAG + A E+IK MP P VW ALL ACR+Y E+ A NL +L+P+ GN+VL
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN+++ W++ VR+ MK++ I+K G S I V N +H F A D SH + +I M
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L+++ +KA GY P T L D +E+EK + HHSEK+A+AFGL++ PG IRI KN
Sbjct: 537 LSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKN 596
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCH A K IS R +IVRD NRFH F +G CSC DYW
Sbjct: 597 LRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 150/356 (42%), Gaps = 78/356 (21%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
Q+H ++++ DGN V L+ C N++ A+ VFD I + W +M+ Y+
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 189 QNYEEENGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+ + +F R + P D + +S V+ AC R+ G+ +H +K + ++
Sbjct: 81 NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140
Query: 248 FVGSALVDMYGKCGSIQDA-----EIA--------------------------FNKMPER 276
FV +AL++MY K G I+ A E+A F++MPER
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER 200
Query: 277 NLVCWNAIIGGYAHQG-------------------------------HADMALSSFEEMT 305
+LV WN +I G+A G ++ AL F EM
Sbjct: 201 DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQ 260
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+P+ VT+V VLSAC GA+ G K+ + + I+ + +VD+ + G
Sbjct: 261 --LANVLPDKVTMVSVLSACGDVGALGMG-KMIHECIERNRIEIDLKLGTSLVDMYAKCG 317
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL-----DPND 416
+D + + M R + W A++ +G G +A D+ K+ PND
Sbjct: 318 DIDNSLRVFNGMNNRDVFA-WSAMIMGLANHG---FGELALDHFSKMISEDIKPND 369
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/615 (35%), Positives = 333/615 (54%), Gaps = 32/615 (5%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG--- 59
R I N F ++ + +GKQLH L + SG D F+ MYSK G
Sbjct: 37 RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFP 96
Query: 60 --------LKD--------------------DADKMFDEMPERNLATWNAYISNAVLGGR 91
++ +A K+FDEMP+R L TWNA I+ +
Sbjct: 97 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 156
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+ + F + G PD T + + + + +G+Q+HG+ ++ G + ++ V +
Sbjct: 157 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 216
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L Y + ++ ++V + +N V+W ++++ QN E ++ + G P
Sbjct: 217 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 276
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+VLS+C+ +A G+ +HA A+K + V S+L+ MY KCG + DA AF+
Sbjct: 277 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 336
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ + + V W+++I Y G D A+ F M + N V + +L ACS +G
Sbjct: 337 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI-NEVAFLNLLYACSHSGLK 395
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+KG+++F M KYG KPG +HY CVVDLLGRAG +D+A II+ MP++ I +W LL+
Sbjct: 396 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 455
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
AC ++ E+ + + ++DPNDS +VLL+N+ A+ RW + VRK M+D +KK
Sbjct: 456 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 515
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
AG SW K +H F+ D S ++ EI + L +L EMK GY PDT L+D++EEEK
Sbjct: 516 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 575
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+++ HSEK+A+AF L+ +P G PIRI KNLR+C DCH AFK+IS I RE+ +RD +R
Sbjct: 576 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 635
Query: 572 FHRFWDGYCSCSDYW 586
FH F +G CSC DYW
Sbjct: 636 FHHFINGKCSCGDYW 650
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 346/618 (55%), Gaps = 36/618 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
+R E ++PN T C+ A + L TG++++A SG +++D+ V + DMY K
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCN 285
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++FDE NL NA SN V G + A+ F + +G PD I+ + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+CS + G+ HG+++R+GF+ ++CN L+D Y KC+ A +FD + +K V+
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 180 WCSMLVVYVQNYEEENGCQMFLT--------------------------------ARREG 207
W S++ YV+N E + + F T +EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V + S+ SAC + L+L + ++ K ++ ++ +G+ LVDM+ +CG + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
FN + R++ W A IG A G+A+ A+ F++M + P+ V V L+ACS
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK--PDGVAFVGALTACSH 583
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++G +IFYSM +G+ P HY C+VDLLGRAGL++ A ++I++MPM P +W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV G E+ AA+ + L P +G++VLLSN++A+ GRW + VR MK+ G
Sbjct: 644 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K G S I ++ + H F + D SH I+AML ++ + G++PD + L DV+
Sbjct: 704 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 763
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E+EK+ + HSEK+A+A+GLI+ G IRI KNLR+C DCHS KF S + RE+I+R
Sbjct: 764 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 568 DNNRFHRFWDGYCSCSDY 585
DNNRFH G CSC D+
Sbjct: 824 DNNRFHYIRQGKCSCGDF 841
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 10/404 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ISP+ +TFP A + G Q+H L +K G D+FV S Y++ G
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLN 119
D A K+FDEM ERN+ +W + I K+A+D F + R P+ +T ++
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L+ G +++ F+ SG + N + + LVD Y KCN + +AK +FD N
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+M YV+ +F GV P + S +S+C+++ + G+S H +
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ E + +AL+DMY KC A F++M + +V WN+I+ GY G D A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+FE M N V+ ++S + E+ +++F SM + G+ +
Sbjct: 425 TFETMPE------KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 360 LLGRAGLVDRA---YEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G G +D A Y I++ ++ + + L++ G PE
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 5/313 (1%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
+N+ I G AI F+ + +G PD TF L+AC+ G Q+HG +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+ G+ ++ V N LV FY +C E+ A+ VFD + ++N VSW SM+ Y + ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 199 MFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F R E V P + V+SACA++ LE G V+A + +E N + SALVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KC +I A+ F++ NL NA+ Y QG AL F M M P+ ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM--MDSGVRPDRIS 339
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
++ +S+CS+ + G K + L+ G + ++D+ + D A+ I M
Sbjct: 340 MLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 378 PMRPTISVWGALL 390
+ T+ W +++
Sbjct: 399 SNK-TVVTWNSIV 410
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/586 (38%), Positives = 308/586 (52%), Gaps = 40/586 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFPC+ KA S V G+++H A K G +FVG MY K G +A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ DEM R++ +WN+ + R +A++ + D T + L A S+ +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
V K +F + K+ VSW M+
Sbjct: 256 ---------------------------------TENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
VY++N +++ +G EP I+SVL AC + L LG+ +H + +
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +AL+DMY KCG ++ A F M R++V W A+I Y G A++ F ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
VP+ + V L+ACS AG +E+G F MT Y I P EH AC+VDLLGRAG
Sbjct: 403 D--SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
V AY I++M M P VWGALL ACRV+ ++G +AAD LF+L P SG +VLLSN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A GRWEE +R MK G+KK G S + V IH F D SH ++ EI L
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP-----PGVPIRIT 540
L ++MK GY+PD+ AL+DVEEE+K T + HSEK+A+ F L+ IRIT
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH A K IS I RE+I+RD NRFH F G CSC DYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 165/374 (44%), Gaps = 27/374 (7%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R +H ++ N S+ L+ Y +V A+ VFD I ++N + M+ YV N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
G ++F T V P + VL AC+ + +GR +H A K + +FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ LV MYGKCG + +A + ++M R++V WN+++ GYA D AL EM S++
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+ T+ +L A S + + M K G K + ++ + + + A
Sbjct: 239 H--DAGTMASLLPAVS--NTTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEA 293
Query: 371 YEIIKEMP---MRPTISVWGALLNACRVYGKPELGRIAADNL--FKLDPNDSGNHVLLSN 425
E+ M P ++L AC LG+ + KL PN + L+ +
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI-D 352
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
M+A G E+A V + MK + SW ++ + + F R + A+ +K
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDV-----VSWTAMIS-AYGFSG------RGCDAVALFSK 400
Query: 486 LREEMKAAGYIPDT 499
L++ +G +PD+
Sbjct: 401 LQD----SGLVPDS 410
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 325/599 (54%), Gaps = 17/599 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALAL----------KSGQIHDVFVGCS 50
M+ + PN T L + G +HA + KS V +G +
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--- 107
DMY+K G A ++FD MP RN TW+A I VL R A F + G
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
P I + L AC+ L++G QLH L +SG +++ N L+ Y K + A
Sbjct: 339 SPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+FD + K+ VS+ +++ YVQN E +F + VEP + S++ AC+ +A
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L+ GR H + + + +AL+DMY KCG I + FN MP R++V WN +I G
Sbjct: 457 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G A + F EM ++ P+ VT +C+LSACS +G V +G F+ M YG+
Sbjct: 517 YGIHGLGKEATALFLEMNNLGFP--PDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGL 574
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P EHY C+VDLL R G +D AYE I+ MP+R + VW ALL ACRVY +LG+ +
Sbjct: 575 TPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSR 634
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
+ +L P +GN VLLSN+++A GR++EA VR K G KK GCSWI + +H F
Sbjct: 635 MIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFV 694
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D SH ++ EI L + +K GY PDT+F L D+EEEEK + HSEK+A+A+G
Sbjct: 695 GGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYG 754
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++++ I +TKNLR+CGDCH+ K IS + R +IVRD NRFH F +G CSC D+W
Sbjct: 755 ILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 209/433 (48%), Gaps = 26/433 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN++TFP KA SAL G+ +H A+ +G D+FV + DMY K
Sbjct: 116 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 175
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFL 118
DA +F MP R+L WNA ++ G +A+ ++++ P+ T A L
Sbjct: 176 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 235
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN----------VSVCNGLVDFYGKCNEVGLAKVV 168
+ L G +H + +R+ N V + L+D Y KC + A+ V
Sbjct: 236 PLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 295
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARI 225
FD + +N+V+W +++ +V +F +G + P I+S L ACA +
Sbjct: 296 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASL 353
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L +G +HA+ K+ V ++ G++L+ MY K G I A F++M ++ V ++A++
Sbjct: 354 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 413
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY G A+ A F++M + C P+ T+V ++ ACS A++ G S+ ++
Sbjct: 414 SGYVQNGRAEEAFLVFKKMQA--CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR- 470
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G+ ++D+ + G +D + ++ MP R +S W ++ YG LG+
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAG---YGIHGLGK-E 525
Query: 406 ADNLFKLDPNDSG 418
A LF L+ N+ G
Sbjct: 526 ATALF-LEMNNLG 537
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEE--NGCQMFLTARREGVEPKDFMISSVLSAC 222
A +FD I + ++ ++ Y + +G ++ R V P ++ L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ +A GR++H A+ A ++ ++FV +AL+DMY KC + DA F MP R+LV WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI----- 337
A++ GYAH G A++ M PN TLV +L ++ GA+ +G +
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRI 255
Query: 338 ----FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ K + G ++D+ + G + A + MP R ++ W AL+
Sbjct: 256 RACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WSALI 311
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/561 (39%), Positives = 313/561 (55%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQ+HA +++ G Q D F F + S + A ++F+++ N+ TWN I
Sbjct: 52 KQIHAFSIRHGVPPQNPD-FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGF 110
Query: 87 VLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
P A++ F + PD TF A + + LG +H +VR+GFD
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSL 170
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N LV Y A VF+ + ++ V+W S++ + N ++
Sbjct: 171 RFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGS 230
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
EGVEP F + S+LSAC + L LG VH VK + N +AL+D+Y KCG+ +D
Sbjct: 231 EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRD 290
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A+ F++M ER++V W ++I G A G + AL F E+ R P+ +T V VL AC
Sbjct: 291 AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE--RQGLKPSEITFVGVLYAC 348
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S G +++G F M +YGI P EH+ C+VDLL RAG V AY+ I+ MP+ P +
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W LL AC ++G ELG +A + +L+ SG+ VLLSN++A+ RW + VRK M
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G+KK G S + +KNR++ F D SH ++ E AML K+ + +K GY+P T L D
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+EEEEK T + HH+EK+A+AF L+ PPG PIRI KNLR+C DCH A K IS + RE+I
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD +RFH F DG CSC DYW
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 172/377 (45%), Gaps = 26/377 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ TFP LFKA + L G+ +H++ +++G FV S MYS G + A
Sbjct: 132 ILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAY 191
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ M R+ WN+ I+ L G P A+ + + G EPD T + L+AC +
Sbjct: 192 QVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELG 251
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG ++H ++V+ G N N L+D Y KC A+ VFD + +++ VSW S++V
Sbjct: 252 ALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIV 311
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-----RSVHAVAVK 240
N ++F R+G++P + VL AC+ L+ G R +
Sbjct: 312 GLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIL 371
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+E + +VD+ + G + DA MP N V W ++G GH ++
Sbjct: 372 PRIEHH----GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEV 427
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PGAEHYACV 357
+ E+ + ++V L + ++ R V+ KI L G+K PG Y+ V
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM----LMKGVKKTPG---YSLV 480
Query: 358 VDLLGRAGLVDRAYEII 374
L +R YE I
Sbjct: 481 -------ELKNRVYEFI 490
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ FT L A L G+++H +K G + + + D+YSK G
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGN 287
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FDEM ER++ +W + I + G A+ F L R G +P ITF L A
Sbjct: 288 FRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
Query: 121 CSDCSLLQLG-------RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGI 172
CS C +L G ++ +G L R G C +VD + +VG A + +
Sbjct: 348 CSHCGMLDEGFNYFRRMKEEYGILPRIEHHG----C--MVDLLCRAGKVGDAYDYIRNMP 401
Query: 173 IDKNDVSWCSML-VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+ N V W ++L + + E R E DF++ S L A R
Sbjct: 402 VPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/517 (40%), Positives = 298/517 (57%), Gaps = 3/517 (0%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
MP + +W A I+ + G AI +G PD T L AC+ + L+ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 131 RQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
+ + G +V V +D Y KC E+ A+ VFD + +++ V+W +M+ Y
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N +F + EG +P + + LSAC R+ L+LGR + V GN +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+AL+DMY KCGS +A + F +M ER+++ WNA+I G GH +A + +M
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
+ N T + +L +C+ G V G + F++MT Y I P EHY C+VDL RAGL++
Sbjct: 241 KLNDN--TFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEE 298
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A+++I +MPM VWGALL C+++ +L A L +L+P +SGN+V+LSN+++
Sbjct: 299 AHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSN 358
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
+GRWE+A +R EMK GI+K SW+ + ++H F D SH + +I A L +L E
Sbjct: 359 SGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGME 418
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
MKA GY P T ++DVE EEK + HHSEKIA+AF LI PG IR+TKNLR+C DC
Sbjct: 419 MKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDC 478
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
HSA K IS I RE++VRDNNRFH F DG+CSC+DYW
Sbjct: 479 HSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKS-GQIHDVFVGCSAFDMYSKTGLKDDA 64
+ P+ FT + A + + TG+ + A A + G VFV +A D+Y K G + A
Sbjct: 37 MRPDSFTAVRVLTACARVADLETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKA 96
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+FDEM R+ W A + G P+ A+D F ++ G +PD T L+AC+
Sbjct: 97 RSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRL 156
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L LGRQ G + GN + L+D Y KC A +VF +++++ + W +M+
Sbjct: 157 GALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMI 216
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACV 243
+ E+ + ++ GV+ D +L +C + GR H + +
Sbjct: 217 LGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRI 276
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFE 302
I +VD++ + G +++A MP N V W A++GG +AD+A + +
Sbjct: 277 SPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALK 336
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSR 327
++ + NYV L + S R
Sbjct: 337 QLIRLEPWNSGNYVMLSNIYSNSGR 361
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E P+ +T A + L G+Q + + + +G + DMY+K G
Sbjct: 134 MQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGS 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F +M ER++ WNA I + G K A ++++G + + TF L +
Sbjct: 194 TSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCS 253
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
C+ L+ GRQ H + +VD + + + A +++ D + N V
Sbjct: 254 CTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAV 313
Query: 179 SWCSML 184
W ++L
Sbjct: 314 VWGALL 319
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 325/599 (54%), Gaps = 17/599 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALAL----------KSGQIHDVFVGCS 50
M+ + PN T L + G +HA + KS V +G +
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--- 107
DMY+K G A ++FD MP RN TW+A I VL R A F + G
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
P I + L AC+ L++G QLH L +SG +++ N L+ Y K + A
Sbjct: 339 SPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+FD + K+ VS+ +++ YVQN E +F + VEP + S++ AC+ +A
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L+ GR H + + + +AL+DMY KCG I + FN MP R++V WN +I G
Sbjct: 457 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G A + F EM ++ P+ VT +C+LSACS +G V +G F+ M YG+
Sbjct: 517 YGIHGLGKEATALFLEMNNLGFP--PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGL 574
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P EHY C+VDLL R G +D AYE I+ MP+R + VW ALL ACRVY +LG+ +
Sbjct: 575 TPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSR 634
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
+ +L P +GN VLLSN+++A GR++EA VR K G KK GCSWI + +H F
Sbjct: 635 MIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFV 694
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D SH ++ EI L + +K GY PDT+F L D+EEEEK + HSEK+A+A+G
Sbjct: 695 GGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYG 754
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++++ I +TKNLR+CGDCH+ K IS + R +IVRD NRFH F +G CSC D+W
Sbjct: 755 ILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 209/433 (48%), Gaps = 26/433 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN++TFP KA SAL G+ +H A+ +G D+FV + DMY K
Sbjct: 116 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 175
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFL 118
DA +F MP R+L WNA ++ G +A+ ++++ P+ T A L
Sbjct: 176 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 235
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN----------VSVCNGLVDFYGKCNEVGLAKVV 168
+ L G +H + +R+ N V + L+D Y KC + A+ V
Sbjct: 236 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 295
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARI 225
FD + +N+V+W +++ +V +F +G + P I+S L ACA +
Sbjct: 296 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASL 353
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L +G +HA+ K+ V ++ G++L+ MY K G I A F++M ++ V ++A++
Sbjct: 354 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 413
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY G A+ A F++M + C P+ T+V ++ ACS A++ G S+ ++
Sbjct: 414 SGYVQNGRAEEAFLVFKKMQA--CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR- 470
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G+ ++D+ + G +D + ++ MP R +S W ++ YG LG+
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAG---YGIHGLGK-E 525
Query: 406 ADNLFKLDPNDSG 418
A LF L+ N+ G
Sbjct: 526 ATALF-LEMNNLG 537
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 14/238 (5%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEE--NGCQMFLTARREGVEPKDFMISSVLSAC 222
A +FD I + ++ ++ Y + +G ++ R V P ++ L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 223 ARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWN 282
+ +A GR++H A+ A ++ ++FV +AL+DMY KC + DA F MP R+LV WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
A++ GYAH G A++ M PN TLV +L ++ GA+ +G + ++
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV-HAYC 254
Query: 343 LKYGIKP----------GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ + P G ++D+ + G + A + MP R ++ W AL+
Sbjct: 255 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WSALI 311
>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 654
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 326/595 (54%), Gaps = 18/595 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVT-------GKQLHALALKSGQI---HDVFVGCSAFDMYSK 57
P F L KA+S+ P G QLHA A+ G + + + Y+
Sbjct: 62 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFC 115
D A K+FD MP RN TWNA I GR + AI F +++R G PD TF
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181
Query: 116 AFLNACS----DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
A L+ L+LG LH ++++G + + V LV Y + AKV FD
Sbjct: 182 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 241
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ + + W SM+ YV EEE +F + ++P F+ S+V S C R+ LE+G
Sbjct: 242 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 301
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ VHA ++K+ E + + +AL+ MY CG I DA+ F+ N++ +N++I
Sbjct: 302 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQH 361
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ AL F +M +P+ VTL+ ++S+ + AG V +G+++F SM GIKP
Sbjct: 362 GYPKEALEHFRQMKF--AGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMY 419
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HYACVVD+L R+G + +A + I EMP +W +L AC + E G+ A+ LF+
Sbjct: 420 QHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE 479
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
++P ++ N++LL N++A GRW EA+ VR M + G+ K SWI + R + F D
Sbjct: 480 MEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDR 539
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + EI L +L +K AGY+PD +FA ++++ + K + +H EK+A AFG +A
Sbjct: 540 SHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAA 599
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P G +RI KNLR+CGDCH A+K+ S + GRE+I+RDN RFH F G+CSC DYW
Sbjct: 600 PSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 654
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P F + +F + I GKQ+HA +LKS D + + MYS G +DA
Sbjct: 278 IKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQ 337
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F N+ ++N+ IS G PK A++ F ++ G PD +T +++ +
Sbjct: 338 KVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAG 397
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA 165
L+ G Q+ +V G +VD + E+G A
Sbjct: 398 LVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 438
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/582 (36%), Positives = 328/582 (56%), Gaps = 8/582 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+F +FK+ S+ GKQ H LKSG + FV + MYS +A ++
Sbjct: 134 PNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP---DLITFCAFLNACSDC 124
D++P +L+ +++ +S + G K + LRR E D IT+ + L CS+
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGAEV---LRRMAKEDLVLDNITYLSCLRLCSNL 250
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L L RQ+H +VR GF+ V +++ YGKC +V A+ VFD +N V +++
Sbjct: 251 RDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIM 310
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
Y Q+ E +F + V P ++ + L++ A ++ L+ G +H + +K+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYR 370
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ VG+ALV+MY K GSI+DA AF+ M R++V WN +I G++H G L +F+ M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRM 430
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
M +PN +T + VL ACS G VE+G+ F + K+ ++P +HY C+V LL +A
Sbjct: 431 --MIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKA 488
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G+ A + ++ P+ + W ALLNAC V LG+ A+ PNDSG +VLLS
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLS 548
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N+ A + WE VR M G+KK G SWI ++N+ H+F A++ H T I A +
Sbjct: 549 NIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIK 608
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLR 544
++ +++ GY PD +DV+EE++ + +HSEK+A+A+GL+ P P+ +TKN+R
Sbjct: 609 EVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVR 668
Query: 545 ICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IC DCHSA K IS I R +++RD+NRFH F DG CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 8/386 (2%)
Query: 28 TGKQLHALAL---KSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
TG+ +H + +S + DV+ S ++Y K G A K+FD MPERN+ +W A +
Sbjct: 49 TGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMK 108
Query: 85 NAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G + F ++ + P+ +CS ++ G+Q HG ++SG
Sbjct: 109 GYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLM 168
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+ V N LV Y C+ G A V D + + + S L Y++ + G ++
Sbjct: 169 SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRM 228
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+E + + S L C+ + L L R +H+ V+ + A+++MYGKCG +
Sbjct: 229 AKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKV 288
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A+ F+ +N+V I+ Y + AL+ F +M + E PN T L+
Sbjct: 289 LYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTK--EVPPNEYTFAISLN 346
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
+ + ++ G + + + LK G + +V++ ++G ++ A + M R +
Sbjct: 347 SIAELSLLKHG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 384 SVWGALLNACRVYGKPELGRIAADNL 409
+ W ++ +G G A D +
Sbjct: 406 T-WNTMICGFSHHGLGREGLEAFDRM 430
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 4/290 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + ++ T+ + S L +Q+H+ ++ G +V + +MY K G
Sbjct: 228 MAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGK 287
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRP-KNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++FD +N+ N I +A + + A++ F + P+ TF LN
Sbjct: 288 VLYAQRVFDNTHAQNIVL-NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLN 346
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ ++ SLL+ G LHG +++SG+ +V V N LV+ Y K + A+ F G+ ++ V+
Sbjct: 347 SIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVT 406
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVA 238
W +M+ + + G + F G P VL AC+ + +E G + +
Sbjct: 407 WNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLM 466
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
K V+ ++ + +V + K G +DAE P E ++V W A++
Sbjct: 467 KKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNA 516
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 7/262 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFLV---RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L C++ S L+ G +HG L+ +S +V N L++ Y KC E A+ VFD +
Sbjct: 37 LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACARIAGLELGR 232
++N VSWC+M+ Y + + ++F + + P +F+ + V +C+ +E G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
H +K+ + + FV + LV MY C +A + +P +L +++ + GY G
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
M + + V + +T + L CS + +I +S ++ G E
Sbjct: 217 AFKEGAEVLRRMA--KEDLVLDNITYLSCLRLCSNLRDLNLARQI-HSRMVRLGFNSEVE 273
Query: 353 HYACVVDLLGRAGLVDRAYEII 374
++++ G+ G V A +
Sbjct: 274 ASGAIINMYGKCGKVLYAQRVF 295
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 215 ISSVLSACARIAGLELGRSVHA---VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
++ +L CA + L G S+H V ++ +++ ++L+++Y KCG A F+
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
MPERN+V W A++ GY + G L F+ M E+ PN V +CS +G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMV-FSDESRPNEFVATVVFKSCSSSGRI 152
Query: 332 EKGMKIFYSMTLKYGI 347
E+G K F+ LK G+
Sbjct: 153 EEG-KQFHGCFLKSGL 167
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/532 (37%), Positives = 310/532 (58%), Gaps = 1/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G A K+FDEMP+R L TWNA I+ + + + F + G PD T
Sbjct: 35 YVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTL 94
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ + + + +G+Q+HG+ ++ G + ++ V + L Y + ++ ++V +
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 154
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N V+W ++++ QN E ++ + G P +VLS+C+ +A G+ +
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 214
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA A+K + V S+L+ MY KCG + DA AF++ + + V W+++I Y G
Sbjct: 215 HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQG 274
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D A+ F M + E N V + +L ACS +G +KG+++F M KYG KPG +HY
Sbjct: 275 DEAIKLFNSMAE-QTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
CVVDLLGRAG +D+A IIK MP++P +W LL+AC ++ E+ + + ++DP
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDP 393
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
NDS +VLL+N+ A+ RW + VRK M+D +KK AG SW K +H F+ D S
Sbjct: 394 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 453
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
++ EI + L +L EMK GY PDT L+D++EEEK +++ HSEK+A+AF L+ +P G
Sbjct: 454 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 513
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCH AFK+IS I+ RE+ +RD +RFH F +G CSC DYW
Sbjct: 514 APIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 159/339 (46%), Gaps = 12/339 (3%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SP+++T +F S+ L G+Q+H A+K G D+ V S MY + G D +
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ MP RNL WN I G P+ + + ++ +G P+ ITF L++CSD ++
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G+Q+H ++ G V+V + L+ Y KC +G A F D+++V W SM+
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 187 YVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACA----RIAGLELGRSVHAVAVKA 241
Y + + + ++F + A + +E + ++L AC+ + GLEL + K
Sbjct: 268 YGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLEL---FDMMVEKY 324
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSS 300
+ + + +VD+ G+ G + AE MP + + V W ++ +A+MA
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKV 384
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
F+E+ + YV L V ++ R V K M+
Sbjct: 385 FKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N N L++ Y + ++ A+ VFD + D+ +W +M+ +Q E G +F
Sbjct: 24 NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P ++ + SV S A + + +G+ +H A+K +E ++ V S+L MY + G +Q
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D EI MP RNLV WN +I G A G + L ++ M C PN +T V VLS+
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR--PNKITFVTVLSS 201
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G +I ++ +K G + ++ + + G + A + E +
Sbjct: 202 CSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV- 259
Query: 385 VWGALLNACRVYGK 398
+W ++++A +G+
Sbjct: 260 MWSSMISAYGFHGQ 273
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 324/580 (55%), Gaps = 50/580 (8%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+++TF + KA + L + G+++H K G ++FV S D+Y K G A K
Sbjct: 124 NPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQK 183
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FDEM R++ +WN IS G A
Sbjct: 184 LFDEMVVRDVVSWNTLISGYCFSGMVDKA------------------------------- 212
Query: 127 LQLGRQLHGFLVRSGFDG----NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
R FDG N+ + ++ Y + + A+ +F+ + +N VSW +
Sbjct: 213 ------------RMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNA 260
Query: 183 MLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
M+ Y QN + + ++F + E G+ P D + SVLSACA + L+LG+ +H +
Sbjct: 261 MIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN 320
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E +F+G+AL DMY KCG + +A+ F++M ER+++ W+ II G A G+A+ A + F
Sbjct: 321 KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFF 380
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
EM E PN ++ + +L+AC+ AG V+KG++ F M YGI P EHY CVVDLL
Sbjct: 381 AEMIEDGLE--PNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLL 438
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
RAG +D+A +I MPM+P + VWGALL CR+Y E G + +LD N SG+ V
Sbjct: 439 SRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLV 498
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
L+N++A+ GR ++A R M+D K GCSWI + N ++ F D+SH ++ I +
Sbjct: 499 YLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYS 558
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
M+ +L+ +MK AGY P T+ +++++EEEK + HSEK+ALAFGLI G IRI K
Sbjct: 559 MIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVK 618
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
NLR+C DCH A K IS IV RE++VRD +RFH F DG CS
Sbjct: 619 NLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PND T + A + L GK +H ++ +F+G + DMY+K G +A
Sbjct: 287 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 346
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F EM ER++ +W+ I + G A + F + G EP+ I+F L AC+
Sbjct: 347 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 406
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L+ G + + + G + +VD + + A+ + + + + N + W ++
Sbjct: 407 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 466
Query: 184 LVVYVQNYEEENGCQMFLTARR 205
L GC+++ A R
Sbjct: 467 L----------GGCRIYKDAER 478
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 261 GSIQDAEIAFNK-MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G+++ + + FN + N+ +NA++ ++ +S F + P+ T
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
VL AC+ V +G K+ + KYG + +VDL + G A ++ EM +
Sbjct: 132 SVLKACAGLAQVLEGQKV-HCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVV 190
Query: 380 RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM---FAATGRWEEA 436
R +S W L++ G + R+ D + + N V S M +A G EEA
Sbjct: 191 RDVVS-WNTLISGYCFSGMVDKARMVFDGMME------KNLVSWSTMISGYARVGNLEEA 243
>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
Length = 653
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 326/595 (54%), Gaps = 18/595 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVT-------GKQLHALALKSGQI---HDVFVGCSAFDMYSK 57
P F L KA+S+ P G QLHA A+ G + + + Y+
Sbjct: 61 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 120
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFC 115
D A K+FD MP RN TWNA I GR + AI F +++R G PD TF
Sbjct: 121 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 180
Query: 116 AFLNACS----DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
A L+ L+LG LH ++++G + + V LV Y + AKV FD
Sbjct: 181 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 240
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ + + W SM+ YV EEE +F + ++P F+ S+V S C R+ LE+G
Sbjct: 241 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 300
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ VHA ++K+ E + + +AL+ MY CG I DA+ F+ N++ +N++I
Sbjct: 301 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQH 360
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ AL F +M +P+ VTL+ ++S+ + AG V +G+++F SM GIKP
Sbjct: 361 GYPKEALEHFRQMKF--AGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMY 418
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HYACVVD+L R+G + +A + I EMP +W +L AC + E G+ A+ LF+
Sbjct: 419 QHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE 478
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
++P ++ N++LL N++A GRW EA+ VR M + G+ K SWI + R + F D
Sbjct: 479 MEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDR 538
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + EI L +L +K AGY+PD +FA ++++ + K + +H EK+A AFG +A
Sbjct: 539 SHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAA 598
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P G +RI KNLR+CGDCH A+K+ S + GRE+I+RDN RFH F G+CSC DYW
Sbjct: 599 PSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 653
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P F + +F + I GKQ+HA +LKS D + + MYS G +DA
Sbjct: 277 IKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQ 336
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F N+ ++N+ IS G PK A++ F ++ G PD +T +++ +
Sbjct: 337 KVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAG 396
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA 165
L+ G Q+ +V G +VD + E+G A
Sbjct: 397 LVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 437
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 333/617 (53%), Gaps = 61/617 (9%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
KQ+H + G DV + MYSK G + A ++FD M RN ++WN+ IS+
Sbjct: 794 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 853
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITF---------------------------------- 114
G +A F L + +PD++T+
Sbjct: 854 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 913
Query: 115 -CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L A S+ L +G++ HG+++R+GFD +V V L+D Y K + + A+ VFD +
Sbjct: 914 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMK 973
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP-------------------KDFM 214
++N +W S++ Y E+ ++ +EG++P K FM
Sbjct: 974 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM 1033
Query: 215 -----ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
I+ +L ACA ++ L+ G+ +H ++++ ++FV +AL+DMY K S+++A
Sbjct: 1034 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKV 1093
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F ++ + L WN +I G+A G A+S F EM + P+ +T +LSAC +G
Sbjct: 1094 FRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQ--KVGVGPDAITFTALLSACKNSG 1151
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ +G K F SM Y I P EHY C+VDLLGRAG +D A+++I MP++P ++WGAL
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 1211
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L +CR++ AA NLFKL+PN+S N++L+ N+++ RWE+ D +R+ M G++
Sbjct: 1212 LGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 1271
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
SWI + R+H+F + + H +I L +L EMK GY+PD N +++E
Sbjct: 1272 NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEV 1331
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK + H+EK+A+ +GLI + G PIR+ KN RIC DCHSA K+IS + RE+ +RD
Sbjct: 1332 EKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDG 1391
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F +G CSC+D+W
Sbjct: 1392 VRFHHFREGKCSCNDFW 1408
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 194/427 (45%), Gaps = 61/427 (14%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G ++H +K G DV++ C+ + Y + + A+++F EMP WN I +
Sbjct: 693 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 752
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ + ++ F ++ + + + T L AC L +Q+HG++ R G D +VS+
Sbjct: 753 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 812
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY--------------------- 187
CN L+ Y K ++ LA+ VFD + ++N SW SM+ Y
Sbjct: 813 CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 872
Query: 188 ---------------VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ Y+EE + + EG +P ++SVL A + + L +G+
Sbjct: 873 KPDIVTWNCLLSGHFLHGYKEE-VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK 931
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
H ++ + +++VG++L+DMY K S+ A+ F+ M RN+ WN+++ GY+ +G
Sbjct: 932 ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKG 991
Query: 293 HADMALSSFEEMTS----------------------MRCEAVPNYVTLVCVLSACSRAGA 330
+ AL +M R +PN ++ C+L AC+
Sbjct: 992 MFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSL 1051
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++KG +I + ++++ G ++D+ ++ + A+++ + + + T++ W ++
Sbjct: 1052 LQKGKEI-HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK-TLASWNCMI 1109
Query: 391 NACRVYG 397
++G
Sbjct: 1110 MGFAIFG 1116
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 28/354 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN + + +A S L GK+ H L++G DV+VG S DMY K
Sbjct: 902 MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF------ 114
A +FD M RN+ WN+ +S G ++A+ + + G +PDL+T+
Sbjct: 962 LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 1021
Query: 115 -----CA-------------FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
CA L AC+ SLLQ G+++H +R+GF +V V L+D Y
Sbjct: 1022 YAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
K + + A VF I +K SW M++ + + +F ++ GV P +
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141
Query: 217 SVLSACARIAGL--ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
++LSAC + +GL E + ++ + + +VD+ G+ G + +A + MP
Sbjct: 1142 ALLSAC-KNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP 1200
Query: 275 ER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ + W A++G + A ++ + + + NY+ ++ + S +R
Sbjct: 1201 LKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNR 1254
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 74 RNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
RN WN+++ G ++ F L G D + L C+ + LG +
Sbjct: 636 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 695
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+HG L++ GFD +V + L++FYG+C + A VF + + + W +++ +Q+ +
Sbjct: 696 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 755
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ G ++F + ++ + I VL AC ++ L + +H + ++ ++ + +
Sbjct: 756 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 815
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ MY K G ++ A F+ M RN WN++I YA G + A S F E+ S +
Sbjct: 816 LISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELES--SDMK 873
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ VT C+LS G E+ + I M + G KP + V+ + G ++ E
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 932
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 331/600 (55%), Gaps = 41/600 (6%)
Query: 18 KASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLA 77
K+ S H+ Q+HA L+ G H+ + Y+ G D + +F+ E N+
Sbjct: 56 KSKSVAHLL----QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVF 111
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+++A I + V A + + G EP+ TF + L +CS L+ G+ LH
Sbjct: 112 SFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQA 167
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
++ G ++ V GLVD Y + +V A+ +FD + +++ VS +ML Y + E +
Sbjct: 168 IKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKAR 227
Query: 198 QMFLTARREGVE-------------------------------PKDFMISSVLSACARIA 226
+F + V P + + +VLSAC ++
Sbjct: 228 SLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLG 287
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
LE GR +H+ ++ N+ VG+AL+DMY KCGS++DA + F+++ ++++V WN++I
Sbjct: 288 ALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIV 347
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
GYA G + AL FEEMT + P +T + +LSAC G VE+G F M KYG
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHK--PTDITFIGILSACGHGGLVEEGRSFFRLMRDKYG 405
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
I+P EHY C+V+LLGRAG ++ AY ++K M + +WG LL CR++ +LG A
Sbjct: 406 IEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIA 465
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
L +SG +VLLSNM+AATG WE +R MK+ GI+K GCS I V N++H F
Sbjct: 466 KFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEF 525
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A + H ++ EI ML ++ +KA GY P T+ L+D+ EE+K + HSEK+A+AF
Sbjct: 526 VAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAF 585
Query: 527 GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GLI+ PG ++I KNLR+C DCH+ K IS I GR++++RD NRFH F DG CSC DYW
Sbjct: 586 GLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+ T + A L +G+ +H+ G +V VG + DMYSK G +DA +
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD + ++++ WN+ I + G ++A+ F + TG +P ITF L+AC L+
Sbjct: 331 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLV 390
Query: 128 QLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAK-VVFDGIIDKNDVSWCSML 184
+ GR + + G + + +V+ G+ + A +V + I + V W ++L
Sbjct: 391 EEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 332/590 (56%), Gaps = 14/590 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SP+ F+FP + K+ ++L +PV+G+QLH K G + FV + MY K GL
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 61 KDDADKMFDEMPERNLAT--WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
DA K+F+E P+ + + +NA IS + +A F ++ TG D +T +
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ L LGR LHG V+ G D V+V N + Y KC V + +FD + K +
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +++ Y QN + +++ + GV P F + SVLS+CA + ++G V +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
N+FV +A + MY +CG++ A F+ MP ++LV W A+IG Y G ++ L
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGL 343
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F++M P+ V VLSACS +G +KG+++F +M +Y ++PG EHY+C+V
Sbjct: 344 MLFDDMIKRGIR--PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D A E I+ MP+ P +VWGALL AC+++ ++ +A + + +PN+ G
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIG 461
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VL+SN+++ + E +R M++ +K G S++ K R+H+F A D SHE+ E
Sbjct: 462 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEE 521
Query: 479 IQAMLTKLREE-MKAAGYIPDTNFALYDVEE-EEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+ ML +L M+ AG + D + EE + HSE++A+AFG++ PG
Sbjct: 522 VHRMLDELETSVMELAGNM--------DCDRGEEVSSTTREHSERLAIAFGILNSIPGTE 573
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I + KNLR+C DCH K +S IV R+ +VRD +RFH F DG CSC DYW
Sbjct: 574 ILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 6/335 (1%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
WN + +I + ++ R+G PD +F L +C+ SL G+QLH +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC--SMLVVYVQNYEEENG 196
+ G + V L+ Y KC V A+ VF+ + +S C +++ Y N + +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
MF + GV + ++ C L LGRS+H VK ++ + V ++ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
Y KCGS++ F++MP + L+ WNA+I GY+ G A L +E+M S P+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS--SGVCPDPF 258
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TLV VLS+C+ GA + G ++ + G P + + R G + +A +
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVG-KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
MP++ +S W A++ ++G E+G + D++ K
Sbjct: 318 MPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIK 351
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/613 (36%), Positives = 324/613 (52%), Gaps = 41/613 (6%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
+FP + KA S + G +LH A K + D FV DMY+ G + A +FDEM
Sbjct: 116 SFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEM 175
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+R++ TWN I G A F ++ + PD + C ++AC ++ R
Sbjct: 176 SQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 235
Query: 132 QLHGFLV-------------------------------RSGFDGNVSVCNGLVDFYGKCN 160
++ FL+ R N+ V +V Y K
Sbjct: 236 AIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAG 295
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ A+V+FD K+ V W +M+ Y ++ + ++F G++P + SV+S
Sbjct: 296 RLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVIS 355
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
AC + L+ + VH +E + + +AL++MY KCG + A F KMP RN+V
Sbjct: 356 ACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVS 415
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
W+++I +A G A +LS F +M E PN VT V VL CS +G VE+G KIF S
Sbjct: 416 WSSMINAFAMHGEASDSLSLFAQMKQENVE--PNEVTFVGVLYGCSHSGLVEEGKKIFAS 473
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
MT +Y I P EHY C+VDL GRA L+ A E+I+ MPM P + +WG+L++ACRV+G+ E
Sbjct: 474 MTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELE 533
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
LG +AA + KL+P+ G VL+SN++A RW+ ++R M+ + K G S I +
Sbjct: 534 LGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLN 593
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
+ H F D H+++ EI L ++ ++K AGY+PD L DVEEEEK V HSE
Sbjct: 594 GKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSE 653
Query: 521 KIALAFGLIAIPP-------GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
K+AL FGL+ GV IRI KNLR+C DCH+ FK +S + E+IVRD RFH
Sbjct: 654 KLALCFGLMNKEKEEEKGSCGV-IRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFH 712
Query: 574 RFWDGYCSCSDYW 586
R+ DG CSC DYW
Sbjct: 713 RYKDGLCSCRDYW 725
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 192/422 (45%), Gaps = 40/422 (9%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM-PERNLATWNAYISNAVL 88
KQLHA L++ H + S + A +F + P +N+ + +
Sbjct: 32 KQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIVFNSLLRDLSR 91
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G P+ I + +R GG D I+F L A S S L G +LHGF + + V
Sbjct: 92 SGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFV 151
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
GL+D Y C + A+ VFD + ++ V+W +M+ Y + + ++F + V
Sbjct: 152 ETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNV 211
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVK--------------------ACVE---- 244
P + ++ +++SAC R + R+++ ++ C++
Sbjct: 212 MPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAME 271
Query: 245 -------GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N+FV +A+V Y K G + DA + F++ ++LVCW +I YA H A
Sbjct: 272 FFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEA 331
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L FEEM C + P+ VT++ V+SAC G ++K K + T G++
Sbjct: 332 LRVFEEMC---CSGIKPDVVTMLSVISACVNLGTLDKA-KWVHRYTHLNGLESVLPIDNA 387
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP--ELGRIAADNLFKLDP 414
++++ + G +D A ++ ++MP R +S W +++NA ++G+ L A ++P
Sbjct: 388 LINMYAKCGGLDAARDVFEKMPTRNVVS-WSSMINAFAMHGEASDSLSLFAQMKQENVEP 446
Query: 415 ND 416
N+
Sbjct: 447 NE 448
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ T + A L K +H +G + + + +MY+K G D A
Sbjct: 343 IKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAAR 402
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP RN+ +W++ I+ + G +++ F +++ EP+ +TF L CS
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 126 LLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G+++ + + +VD +G+ N + A V + + + N V W S+
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 184 L 184
+
Sbjct: 523 M 523
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 296/492 (60%), Gaps = 2/492 (0%)
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ F ++ + + F + L+ +++GRQ+H L+ G + N L+D
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + AK +F DK +SW +++ VQN + E Q+F RR G+ P
Sbjct: 62 MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
SS++ + + + + +GR +HA + ++F GSAL+DMY KCG + +A FN+MP
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
E+N + WNA+I YA G A A+ F+ M + C P+ VT + VL+ACS G E+
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSM--LHCGFCPDPVTFLSVLAACSHNGLAEEC 239
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
MK F M + P EHY+CV+D LGRAG D+ +++ EMP +W ++L++CR
Sbjct: 240 MKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCR 299
Query: 395 VYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGC 454
+YG +L +AA+NLF + P D+ +V+LSN++A G WE A V+K M+D G++K +G
Sbjct: 300 IYGNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGN 359
Query: 455 SWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTE 514
SW+ +K +I++F + D ++ EI+ L +L EEM GY PDT+ AL+ V+ ++K+
Sbjct: 360 SWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLES 419
Query: 515 VGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHR 574
+ +HSE++A+AF LI PPG PI + KNL C DCH+A K IS IV R++IVRD+ RFH
Sbjct: 420 LKYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHH 479
Query: 575 FWDGYCSCSDYW 586
F DG+CSC DYW
Sbjct: 480 FKDGFCSCGDYW 491
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMP 72
F L + AL G+Q+HA + G + F+G + DMYSK G+ D A +F
Sbjct: 21 FASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGMLDAAKTIFANKS 80
Query: 73 ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
++ +W A I+ V G+ + A+ F N+RR G PD T + + + S ++ +GRQ
Sbjct: 81 DKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRATCSSIIKSSSSLGVIGIGRQ 140
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LH +L SG +V + L+D Y KC + A F+ + +KN ++W +++ Y Q +
Sbjct: 141 LHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQ 200
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACAR-------IAGLELGRSVHAVAV----KA 241
+N +MF + G P SVL+AC+ + +L R ++++ +
Sbjct: 201 AKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEHYS 260
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSS 300
CV +D G+ G + ++MP E + V W++I+ G+ D+A +
Sbjct: 261 CV----------IDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIYGNQDLATVA 310
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSAC-SRAGAVEKGMKI 337
E + +M VP T +LS ++AG E ++
Sbjct: 311 AENLFTM----VPTDATAYVILSNIYAKAGNWEGAARV 344
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 73/122 (59%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR +SP+ T + K+SS+L + G+QLHA SG + VF G + DMY+K G
Sbjct: 110 MRRAGLSPDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGC 169
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A + F+EMPE+N TWNA IS G+ KNAI F ++ G PD +TF + L A
Sbjct: 170 LDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAA 229
Query: 121 CS 122
CS
Sbjct: 230 CS 231
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/585 (35%), Positives = 323/585 (55%), Gaps = 7/585 (1%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
PN++ F + A + G Q H K G + FV S MYSK D A +
Sbjct: 118 QPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQ 177
Query: 67 MFDEMP-----ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ + + + +N+ ++ V GR A++ + G D +T+ + + C
Sbjct: 178 VLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC 237
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
L LG Q+H L++ G +V V + LVD +GKC +V A+ VFDG+ ++N V W
Sbjct: 238 GQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWT 297
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
S++ Y+QN E E + REG +F + +L+A A +A L G +HA K
Sbjct: 298 SLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKL 357
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++ + VG+AL++MY KCG I + F M R+++ WNA+I GY+ G AL F
Sbjct: 358 GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLF 417
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
++M S PN+VT V VLSAC+ V +G + + ++PG EHY CVV +L
Sbjct: 418 QDMLS--AGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVL 475
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
RAG+++ A ++ ++ + W LLNAC ++ LG A+ + ++DP D G +
Sbjct: 476 CRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYT 535
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSNM+A W+ ++RK M++ +KK G SWI ++N +H+F + ++H +I
Sbjct: 536 LLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYN 595
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
+ L E +K GY+P+ L+DVE+E+K + + +HSEK+A+A+GL+ IP PIR+ K
Sbjct: 596 KVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIK 655
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLRIC DCH+A K IS + R +IVRD +RFH F DG C+C+D+W
Sbjct: 656 NLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 15/387 (3%)
Query: 50 SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
S ++Y K A +FDEM R++ ++N + + G + F N+ + +P
Sbjct: 60 SLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQP 119
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
+ F L+AC+ + G Q HGFL + G + V + LV Y KC V LA V
Sbjct: 120 NEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVL 179
Query: 170 D---GIIDKNDVSWC--SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+ G ID ++ ++C S+L V++ ++ EGV SV+ C +
Sbjct: 180 ESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQ 239
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
I L LG VHA +K + ++FVGS LVDM+GKCG + A F+ + RN+V W ++
Sbjct: 240 IRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSL 299
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ Y G + L+ M R + N T +L+A + A+ G + ++ K
Sbjct: 300 MTAYLQNGEFEETLNLLSCMD--REGTMSNEFTFAVLLNAFAGMAALRHG-DLLHARVEK 356
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
GIK ++++ + G +D +Y++ +M R I+ W A++ Y + LG+
Sbjct: 357 LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIIT-WNAMICG---YSQHGLGKQ 412
Query: 405 AADNLFK--LDPNDSGNHVLLSNMFAA 429
A LF+ L + NHV + +A
Sbjct: 413 ALL-LFQDMLSAGECPNHVTFVGVLSA 438
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 152/338 (44%), Gaps = 20/338 (5%)
Query: 127 LQLGRQLHG-FLVR-------SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
L G+ +H L+R S + N+ N L++ Y KC+++ LA+ +FD + ++ V
Sbjct: 28 LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
S+ ++ Y+ + E ++F +P +++ ++VLSACA + G H
Sbjct: 88 SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAF-----NKMPERNLVCWNAIIGGYAHQGH 293
K + + FV S+LV MY KC + A N + + C+N+++ G
Sbjct: 148 FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGR 207
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A+ M V + VT V V+ C + + G+++ ++ LK G+
Sbjct: 208 LGEAVEVLGRMVDE--GVVWDSVTYVSVMGLCGQIRDLGLGLQV-HAQLLKGGLTFDVFV 264
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE--LGRIAADNLFK 411
+ +VD+ G+ G V A ++ + R + VW +L+ A G+ E L ++ +
Sbjct: 265 GSMLVDMFGKCGDVLSARKVFDGLQNRNVV-VWTSLMTAYLQNGEFEETLNLLSCMDREG 323
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
N+ VLL N FA DL+ ++ +GIK
Sbjct: 324 TMSNEFTFAVLL-NAFAGMAALRHGDLLHARVEKLGIK 360
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE N+FTF L A + + G LHA K G + V VG + +MYSK G
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGC 378
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D + +F +M R++ TWNA I G K A+ F ++ G P+ +TF L+A
Sbjct: 379 IDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSA 438
Query: 121 CSDCSLLQLG 130
C+ +L+ G
Sbjct: 439 CAHLALVNEG 448
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 332/570 (58%), Gaps = 18/570 (3%)
Query: 31 QLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDAD-----KMFDEMPERNLATW--- 79
QLHA+A+K+G Q H FV + ++ G + A ++FD +P W
Sbjct: 46 QLHAVAVKAGGGLQAHPAFV-TRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNT 104
Query: 80 --NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
Y GG + A F+ + G PD TF + L AC+ + GRQ HG
Sbjct: 105 LLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVA 164
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
V++G + V L++ Y +C +V A+V+FD + + VS+ +M+ V++
Sbjct: 165 VKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEAL 224
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F + +G++P + SVLSACA + LELGR +H K ++ + V +AL+DMY
Sbjct: 225 VLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMY 284
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KCGS++DA F M R+ W+ ++ YA+ G+ A+S FEEM + P+ VT
Sbjct: 285 AKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK--PDDVT 342
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ VL ACS +G V +G++ F SM +YGI G +HY CV DLL R+G ++RAY+ I E+
Sbjct: 343 FLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P++PT +W LL+AC +G ++G+ + + +LD + G++V+ SN+ A TGRWEE +
Sbjct: 402 PIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMN 461
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
+VRK M + G+ K GCS I + N +H F A D SH + E + M+ ++ E++K GY+P
Sbjct: 462 MVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Query: 498 DTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
+T+ + ++ EEEK T + +HSEK+A++FGL+ PG +RI KNLR+C DCHS K +
Sbjct: 522 NTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLV 581
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S + R +I+RD NRFH F DG CSC DYW
Sbjct: 582 SMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ++P+ +TF L KA ++ G+Q H +A+K+G +V + +MY++ G
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A MFD M + ++NA I+ +V P A+ F ++ G +P +T + L+A
Sbjct: 189 VRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSA 248
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LGR +H ++ + D V V L+D Y KC + A VF + ++ +W
Sbjct: 249 CALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAW 308
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+V Y + MF +++G++P D VL AC+ + G +
Sbjct: 309 SVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE 368
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ I + D+ + G ++ A +++P + + W ++ A G DM
Sbjct: 369 YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKR 428
Query: 300 SFEEMTSM 307
FE + +
Sbjct: 429 VFERILEL 436
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/606 (36%), Positives = 334/606 (55%), Gaps = 35/606 (5%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------------- 59
F L +A L GKQLH+L SG D F+ ++YSK G
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 60 ----------LK--------DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+K + A +FDEMP+RN+ATWNA ++ + A+ F
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ PD + + L C+ L G+Q+H ++++ GF+ N+ V L Y K
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ + V + + D + V+W +++ Q E + + G P SV+S+
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C+ +A L G+ +HA AVKA + V S+LV MY +CG +QD+ F + ER++V W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYS 340
+++I Y G + A+ F EM E +P N +T + +L ACS G +KG+ +F
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQ---ENLPGNEITFLSLLYACSHCGLKDKGLGLFDM 428
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
M KYG+K +HY C+VDLLGR+G ++ A +I+ MP++ +W LL+AC+++ E
Sbjct: 429 MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
+ R AD + ++DP DS ++VLL+N++++ RW+ VR+ MKD +KK G SW+ VK
Sbjct: 489 IARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVK 548
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
N++H F D H ++ EI L +L E+K GY+PDT+ L+D++ EEK + HHSE
Sbjct: 549 NQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSE 608
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
K+A+AF L+ P GVPIR+ KNLR+C DCH A K+IS I E+IVRD++RFH F +G C
Sbjct: 609 KLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTC 668
Query: 581 SCSDYW 586
SC DYW
Sbjct: 669 SCGDYW 674
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 165/334 (49%), Gaps = 5/334 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++++ + + + L + G+Q+HA +K G ++ VGCS MY K G D +++
Sbjct: 199 PDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERV 258
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
+ MP+ +L WN +S G + +D + ++ G PD ITF + +++CS+ ++L
Sbjct: 259 INWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAIL 318
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+Q+H V++G VSV + LV Y +C + + F +++ V W SM+ Y
Sbjct: 319 CQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAY 378
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGN 246
+ + E ++F +E + + S+L AC+ + G + + VK ++
Sbjct: 379 GFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKAR 438
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + LVD+ G+ G +++AE MP + + + W ++ +A++A +E+
Sbjct: 439 LQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVL 498
Query: 306 SMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + +YV L + S+ +R V + MK
Sbjct: 499 RIDPQDSASYVLLANIYSSANRWQNVSEVRRAMK 532
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ TF + + S L I GKQ+HA A+K+G +V V S MYS+ G
Sbjct: 293 MKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGC 352
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+ K F E ER++ W++ I+ G+ + AI F + + + ITF + L A
Sbjct: 353 LQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYA 412
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-V 178
CS C L G L +V+ G + LVD G+ + A+ + + K D +
Sbjct: 413 CSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAI 472
Query: 179 SWCSML 184
W ++L
Sbjct: 473 IWKTLL 478
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP+ F S++L AC + + LG+ +H++ + + F+ + L+++Y K G +Q A
Sbjct: 68 EPRLF--SNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVA 125
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT-----------------SMRCEA 311
F++MP RN++ N +I Y G+ + A + F+EM M EA
Sbjct: 126 LFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEA 185
Query: 312 V------------PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+ P+ +L VL C+ GA+ G ++ ++ +K G + +
Sbjct: 186 LLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQV-HAYVMKCGFECNLVVGCSLAH 244
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ +AG + +I MP ++ W L++
Sbjct: 245 MYMKAGSMHDGERVINWMP-DCSLVAWNTLMS 275
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/616 (35%), Positives = 330/616 (53%), Gaps = 41/616 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + SPN T+ + A ++ G LHA L+ D+ G DMY+K G
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F + E + +WN+ I+ V G ++A+ F +RR+ D L
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGV 388
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC--------------------- 159
CS G LHG+ ++SG + V N ++ Y KC
Sbjct: 389 CSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISW 448
Query: 160 ----------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++G A+ FD + ++N V+W SML YVQN E G +++++ R GV+
Sbjct: 449 TAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P ++ + ACA +A ++LG V A K + N+ V +++V MY +CG I++A+
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNT 568
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F+ + +++L+ WNA++ +A G + +FE+M C+ PN+++ V VLS CS G
Sbjct: 569 FDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECK--PNHISYVSVLSGCSHMG 626
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V +G F SMT +GI P EH++C+VDLLGRAGL+++A ++I+ MP +P +VW AL
Sbjct: 627 LVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSAL 686
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L +CRV+ L AA L +LD S +VLLSNM++ +G + +RK MK GI+
Sbjct: 687 LGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIR 746
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
GCSWI V NR+H+F +TSH +I+ + KL E MK I DT Y E
Sbjct: 747 TSRGCSWIEVDNRVHVFTVDETSHP---QIKEVYLKLEEMMKM---IEDT--GKYITVES 798
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
+HSEK+A AFGL+ +P +PI + KNLR+C DCH K +S + RE+I+RD
Sbjct: 799 SVHRSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDG 858
Query: 570 NRFHRFWDGYCSCSDY 585
RFH F DG CSC DY
Sbjct: 859 YRFHHFKDGICSCKDY 874
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 190/445 (42%), Gaps = 68/445 (15%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD----- 65
F+F + KA +L QLHAL K G + + S MY K G D A+
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 66 --------------------------KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF 99
++F+ MPER+ +WN IS G + F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 100 INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC 159
+ + G P+ +T+ + L+AC+ S L+ G LH ++R ++ NGL+D Y KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
+ LAK VF + + + +SW S++ V E+ +F RR V +F++ ++L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA---------- 269
C+ G +H +K+ + + VG+A++ MY KCG A++
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446
Query: 270 ---------------------FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
F+ MPERN+V WN+++ Y G ++ L + SMR
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLY---VSMR 503
Query: 309 CEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
V P+++T + AC+ V+ GM++ T K+G+ +V + R GL+
Sbjct: 504 SNGVQPDWITFTTSIRACADLAIVKLGMQVVTHAT-KFGLSLNVSVANSIVTMYSRCGLI 562
Query: 368 DRAYEIIKEMPMRPTISVWGALLNA 392
A + + IS W A+L A
Sbjct: 563 KEAKNTFDSIDDKDLIS-WNAMLAA 586
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 209/519 (40%), Gaps = 86/519 (16%)
Query: 17 FKASSALH-IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
FK S H P ++LHA + SG +F+ + MYS GL DA ++F E RN
Sbjct: 14 FKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRN 73
Query: 76 LATWNAYISNAVLGGRPKNAIDAF----------------------------------IN 101
+ TWN I V R +A F +
Sbjct: 74 IFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLM 133
Query: 102 LRRT---GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
+R T G D +F + + AC +L QLH + + GF + N +V Y K
Sbjct: 134 IRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVK 193
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ-------------------- 198
C +V LA+ VF I + W SM+ Y Q Y Q
Sbjct: 194 CGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIF 253
Query: 199 -----------MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
MF+ +G P SVLSACA + L+ G +HA ++ ++
Sbjct: 254 SQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDL 313
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
G+ L+DMY KCG + A+ F + E + + WN++I G H G + AL F +M
Sbjct: 314 VFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMR-- 371
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R V + L +L CS G ++ + T+K G+ A ++ + + G
Sbjct: 372 RSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDT 430
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM- 426
D+A + + MP+R TIS W A++ A G ++G+ A F + P N V ++M
Sbjct: 431 DKADLVFRLMPLRNTIS-WTAMITAFSRSG--DIGK--ARGYFDMMPER--NIVTWNSML 483
Query: 427 --FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
+ G EE + M+ G++ WI+ I
Sbjct: 484 STYVQNGFSEEGLKLYVSMRSNGVQP----DWITFTTSI 518
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 326/578 (56%), Gaps = 11/578 (1%)
Query: 15 CLFKASSAL-HIPV--TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
C+ SSAL H+ G++ HA A+K D+ VG + DMY K G + + K+F+ M
Sbjct: 369 CVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM 428
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
R+ +W ++ R A++ + L++ G D + + L C + L +
Sbjct: 429 GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLK 488
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
Q+H + +R+G ++ + N L+D YG+C E + +F + K+ VSW SM+ N
Sbjct: 489 QVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNG 547
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA--CVEGNIFV 249
+F ++ ++P + S+L A A ++ L G+ VH ++ +EG +
Sbjct: 548 RLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV- 606
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
S+LVDMY CGS+ A F + +++V W A+I GH A+ F+ M ++
Sbjct: 607 -SSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRM--LQT 663
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P++V+ + +L ACS + VE+G M KY +KP EHYACVVD+LGR+G +
Sbjct: 664 GLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEE 723
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
AYE IK MPM P +VW ALL ACRV+ L +AA+ L +L+P++ GN++L+SN+FA
Sbjct: 724 AYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAE 783
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
G+W A R M + G++K CSWI + N IH F + D H + I L+++ E
Sbjct: 784 MGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEM 843
Query: 490 M-KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGD 548
+ + GY+ DT F L+D EEEK+ + HSE+IA+AFGLI+ PG+PIRI KNLR+CGD
Sbjct: 844 LRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGD 903
Query: 549 CHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CH K +S + R+++VRD NRFH F G CSC D+W
Sbjct: 904 CHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 190/398 (47%), Gaps = 16/398 (4%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+P+ T + KA A G ++H LA+K G V + MY+K GL D A +
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALR 220
Query: 67 MFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F+ + + R++A+WN+ +S V GR A+ F ++ G + T A L C++
Sbjct: 221 VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAEL 280
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LL LGR+LH L++ G + N+ CN L+ Y K V A VF I +K+ +SW SML
Sbjct: 281 GLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSML 339
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
YVQN F + G +P + S+ SA ++ L GR HA A+K +
Sbjct: 340 SCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
++ VG+ L+DMY KCGSI+ + F M R+ + W I+ +A AL E +
Sbjct: 400 TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEAL---EMI 456
Query: 305 TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC---VVDL 360
++ E + + + + +L C ++ ++ Y I+ G ++D+
Sbjct: 457 LELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC-----YAIRNGLLDLILENRLIDI 511
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
G G D + + + + + +S W +++N C G+
Sbjct: 512 YGECGEFDHSLNLFQRVEKKDIVS-WTSMINCCTNNGR 548
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 201/404 (49%), Gaps = 12/404 (2%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAF-DMYSKTGLKDDADKM 67
N +T + + + L + G++LHA LK G ++ + C+A MY+K G D A ++
Sbjct: 266 NSYTSVAVLQVCAELGLLSLGRELHAALLKCGS--ELNIQCNALLVMYAKYGRVDSALRV 323
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F ++ E++ +WN+ +S V AID F + + G +PD + +A S L
Sbjct: 324 FGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRL 383
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
GR+ H + ++ ++ V N L+D Y KC + + VF+ + ++ +SW ++L +
Sbjct: 384 NNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACF 443
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ +M L ++EG+ MI S+L C + + L + VH A++ + ++
Sbjct: 444 AQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DL 502
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ + L+D+YG+CG + F ++ ++++V W ++I + G + A+ F EM
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKA 562
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
+ P+ V LV +L A + ++ KG ++ + ++ + +VD+ G +
Sbjct: 563 NIQ--PDSVALVSILVAIAGLSSLTKGKQV-HGFLIRRNFPIEGPVVSSLVDMYSGCGSM 619
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ A + + + + +W A++NA ++G G+ A D LFK
Sbjct: 620 NYAIRVFERAKCKDVV-LWTAMINATGMHGH---GKQAID-LFK 658
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 14/373 (3%)
Query: 29 GKQLHALALKSGQIH---DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
G+Q+HA A+ +G ++ D F+ MY + G DDA ++F+ MP R + +WNA +
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 86 AVLGGRPKNAIDAFINLRRT---GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
+ G A+ + +R + G PD T + L AC + G ++HG V+ G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV-SWCSMLVVYVQNYEEENGCQMF 200
D + V N L+ Y KC + A VF+ + D DV SW S++ VQN +F
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+ G + +VL CA + L LGR +HA +K E NI + LV MY K
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKY 314
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F ++ E++ + WN+++ Y A+ F EM + P++ +V
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQ--PDHACVVS 372
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+ SA + G + F++ +K + + ++D+ + G ++ + ++ + M +R
Sbjct: 373 LSSALGHLSRLNNGRE-FHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR 431
Query: 381 PTISVWGALLNAC 393
IS W +L AC
Sbjct: 432 DHIS-WTTIL-AC 442
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 231 GRSVHAVAVKACV---EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
GR VHA AV + + F+ + LV MYG+CG + DA FN MP R + WNA++G
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 288 YAHQGHADMALSSFEEM-TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
Y G A A+ + M S + P+ TL VL AC G G ++ + + +K G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEV-HGLAVKVG 194
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT-ISVWGALLNACRVYGK 398
+ ++ + + GL+D A + + + ++ W ++++ C G+
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGR 247
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++ I P+ + A + L GKQ+H ++ + V S DMYS G
Sbjct: 559 MQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGS 618
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F+ +++ W A I+ + G K AID F + +TG PD ++F A L A
Sbjct: 619 MNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYA 678
Query: 121 CSDCSLLQLGRQLHGFLV---RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKN 176
CS L++ G+ +V R C +VD G+ + A + +D
Sbjct: 679 CSHSKLVEEGKHYLDIMVSKYRLKPWQEHYAC--VVDILGRSGQTEEAYEFIKTMPMDPK 736
Query: 177 DVSWCSML 184
WC++L
Sbjct: 737 SAVWCALL 744
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 308/581 (53%), Gaps = 38/581 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFPC+ KA S V GK++H A K G +FVG MY K G +A
Sbjct: 137 VKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 196
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ DEM R++ +WN+ ++ R +A++ + D T + L A S+ +
Sbjct: 197 LVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 256
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
V K +F + K+ VSW M+
Sbjct: 257 ---------------------------------TENVMYVKDMFFKMGKKSLVSWNVMIG 283
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
VY++N +++ +G EP I+SVL AC + L LG+ +H + +
Sbjct: 284 VYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 343
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +AL+DMY KCG + A F M R++V W A+I Y G A++ F +M
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
VP+ + V L+ACS AG +E+G F MT Y I P EH AC+VDLLGRAG
Sbjct: 404 D--SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 461
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
V AY+ I+EMPM P VWGALL ACRV+ ++G +AAD LF+L P SG +VLLSN
Sbjct: 462 KVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSN 521
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A GRWEE +R MK G+KK G S + V IH F D SH ++ EI L
Sbjct: 522 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDV 581
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP---PGVPIRITKN 542
L ++MK GY+PD+ AL+DVEEE+K T + HSEK+A+ F L+ IRITKN
Sbjct: 582 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKN 641
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
LRICGDCH A K IS I RE+I+RD NRFH F G CSC+
Sbjct: 642 LRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L+ R +H ++ N S+ L+ Y +V A+ VFD I ++N + M+
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
YV N G Q+F T V+P + VL AC+ + +G+ +H A K +
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+FVG+ LV MYGKCG + +A + ++M R++V WN+++ GYA D AL EM S
Sbjct: 176 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMES 235
Query: 307 MR 308
++
Sbjct: 236 VK 237
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 210 PKD--FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
PK+ FM+ VL + L R+VH+ + + N +G L+ Y + A
Sbjct: 39 PKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATAR 95
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F+++PERN++ N +I Y + G + F M S C P++ T CVL ACS
Sbjct: 96 KVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCS--CHVKPDHYTFPCVLKACSC 153
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+G + G KI S T K G+ +V + G+ G + A ++ EM R +S W
Sbjct: 154 SGNIVIGKKIHGSAT-KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WN 211
Query: 388 ALL 390
+L+
Sbjct: 212 SLV 214
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 312/580 (53%), Gaps = 36/580 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T+P K+ SA + G Q+H+ K +V+V SA MYS+ G +DA ++
Sbjct: 121 PDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRV 180
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN-LRRTGGEPDLITFCAFLNACSDCSL 126
FD MP R++ +WNA I+ G AI+ F + G PD T L A
Sbjct: 181 FDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM----- 235
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
GN K +++ + VFD + K +SW +ML V
Sbjct: 236 -----------------GN-----------AKPDDIRFVRRVFDNMQFKELISWNAMLAV 267
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
Y N ++F+ ++ VEP +++VL C ++ +G+ +H + + + N
Sbjct: 268 YANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPN 327
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + +AL+DMY CG ++DA F+ M R+++ W +II Y GH A+ FE+M
Sbjct: 328 LLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLG 387
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
E P+ + V VL+ACS AG + G F SMT +Y I P AEHY C+VDLLGRAG
Sbjct: 388 QGLE--PDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGC 445
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
++ AY+ I M + P VWGALL ACR++ ++G +AADNLF L P +G +VLLSNM
Sbjct: 446 INEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNM 505
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A GRW + VR M + GIKK G S + + +++H F D H ++ I L +L
Sbjct: 506 YARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDEL 565
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+++ GY P+ L+DVEEE+K + HSEK+A+AF L+ PG IR+T NLR C
Sbjct: 566 LGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTC 625
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K IS I RE++++D NR H G CSC DYW
Sbjct: 626 SDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG---LVDFYGKCNE 161
T GE + L AC + L R H L+ + S + L+ Y C+
Sbjct: 10 TSGE----SLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSA 65
Query: 162 VGLAKVVF-----DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFM 214
+ LA V DG V + ++ + + +F + R G P +
Sbjct: 66 LPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYT 125
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
L +C+ L LG +H+ K ++ N++V + + MY +CG +DA F+ MP
Sbjct: 126 YPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMP 185
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
R++V WNA+I G+A G D A+ F++ ++ ++P+ T+ +L A A
Sbjct: 186 HRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQ-GSMPDAGTMAGILPAMGNA 238
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ++ + P+ T + L GK++H + + ++ + + DMY+ G
Sbjct: 284 MEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGC 343
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FD M R++ +W + IS G + A+D F + G EPD I F A L A
Sbjct: 344 LKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAA 403
Query: 121 CSDCSLLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS LL G+ R +VD G+ + A + +I+ N+
Sbjct: 404 CSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNER 463
Query: 179 SWCSML 184
W ++L
Sbjct: 464 VWGALL 469
>gi|413950787|gb|AFW83436.1| hypothetical protein ZEAMMB73_311793 [Zea mays]
Length = 594
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/581 (38%), Positives = 328/581 (56%), Gaps = 14/581 (2%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQI-----HDVFVGCSAFDMYSKTGLKDDADKMFDE 70
L S+A +P G+QLH LK+G + + Y++ L D + + F +
Sbjct: 18 LVALSAARALP-KGQQLHGHLLKAGHVPATASSHALLAHHLLTFYARCALPDLSLRAFLD 76
Query: 71 MPERNL-ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+P L A W++ IS+ G A D F + G + A + L
Sbjct: 77 LPAPPLPAAWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDRSIPLAAKAVAAAETLSR 136
Query: 130 G----RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
LHG ++ F G+V V + +VD Y KC + A+ +FD + ++N VSW +++
Sbjct: 137 PPFSPHALHGLAAKTPFAGDVFVGSAIVDMYAKCGHLADARRLFDDMPERNVVSWSALIC 196
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y +F A E V D+ +SS++ CA ELG VHA A K ++
Sbjct: 197 GYADAGMHPAAMGIFRLALEEAVPVNDYTVSSIIRVCAAATLFELGAQVHARATKTALDA 256
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ FV S+LV +Y KCG ++ A FN+ PE+NL WNA++ A GH A F EM
Sbjct: 257 SPFVSSSLVSVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQ 316
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ PN++T +C+L+ACS AG V++G K ++S+ YGI+P AEHYA +VDLLGR G
Sbjct: 317 KAGFQ--PNHITFLCLLTACSYAGLVDEG-KRYFSIMKDYGIEPQAEHYASMVDLLGRVG 373
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+ A ++I+ MPM P SVWGALL +CR++ + IAA LF+ SG H+LLS+
Sbjct: 374 LIKEALDLIESMPMEPPESVWGALLMSCRIFKDADTAAIAAKRLFETGSRSSGAHMLLSS 433
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+AA GR +A L RK M+D G++K G SW+ +H F + H+R+ EI +L
Sbjct: 434 TYAAAGRHIDAALARKAMRDAGVRKETGLSWLEAAGEVHTFASNCRRHQRSEEIYKVLEN 493
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
+ E+M+AAGY+ DT+ + DV+ +EK V +HSE++A+ GL+ +P GVPIR+ KNLR+
Sbjct: 494 VGEKMEAAGYVADTSAVVKDVDGDEKRATVRYHSERLAIGLGLLIVPHGVPIRVMKNLRV 553
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
C DCH+A K+++ GR V++RDN RFHRF G CSC D+W
Sbjct: 554 CDDCHNAIKYLTKCTGRVVVLRDNRRFHRFEGGVCSCGDFW 594
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + ND+T + + +A + G Q+HA A K+ FV S +YSK GL +
Sbjct: 217 EAVPVNDYTVSSIIRVCAAATLFELGAQVHARATKTALDASPFVSSSLVSVYSKCGLVEC 276
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F+E PE+NL WNA + + G A + F+ +++ G +P+ ITF L ACS
Sbjct: 277 AYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQKAGFQPNHITFLCLLTACSY 336
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----IDKNDVS 179
L+ G++ + G + +VD G+ VGL K D I ++ +
Sbjct: 337 AGLVDEGKRYFSIMKDYGIEPQAEHYASMVDLLGR---VGLIKEALDLIESMPMEPPESV 393
Query: 180 WCSMLV 185
W ++L+
Sbjct: 394 WGALLM 399
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/512 (39%), Positives = 302/512 (58%), Gaps = 8/512 (1%)
Query: 78 TWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL-GRQLHGF 136
+NA IS G + A+ +R G D T LN+ + LL+L LH
Sbjct: 8 AYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSAA---LLRLPADALHSL 64
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENG 196
L+R+G ++ V N LVD Y K + G A+ VFD + ++ VSW S+L ++ ++
Sbjct: 65 LLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSA 124
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
Q++ GV P +F +++ LS+CA LELGRSVHA AV+ ++ + VG++LV M
Sbjct: 125 LQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSM 184
Query: 257 YGKCGSIQDAEIAFN--KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
Y K GS+ +A+ F+ ++ + + W A+I GYA G +L + +M C P+
Sbjct: 185 YAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCR--PD 242
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
YVT + +L ACS AG V+ G F SM ++GI PGA+HYAC+VDLLGRAG +D A +++
Sbjct: 243 YVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLL 302
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWE 434
R +VW ALL ACR + EL AA +++LDP D+ +V+LSN+++ GRW
Sbjct: 303 NRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWG 362
Query: 435 EADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAG 494
+ VR MK GI K GCSW++ H+F +D H R E+ + ++ E ++ G
Sbjct: 363 DVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQG 422
Query: 495 YIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
Y+ DT +AL D E + + HHSE++A+AFGL+A+P G PIR+ KNLR+CGDCH+A K
Sbjct: 423 YVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAIK 482
Query: 555 FISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++ GRE+++RD+N FH DG CSC DYW
Sbjct: 483 MVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 14/341 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +++T P +++ L +P LH+L L++G + V + D Y+K
Sbjct: 32 MRARGHRADEYTLPPALNSAALLRLPADA--LHSLLLRAGLAAHLHVANALVDAYAKLSR 89
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FDEMP R++ +W + ++ +A+ + ++ G PD A L++
Sbjct: 90 HGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSALQVYRDMVAAGVGPDEFAVAAALSS 149
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKND-V 178
C+ + L+LGR +H VR D +SV N LV Y K +G AK VFD +D+ D +
Sbjct: 150 CAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPI 209
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +++V Y QN +++ R G P +L AC+ ++ GR+ H +
Sbjct: 210 TWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRA-HFRS 268
Query: 239 VKACVEGNIFVG----SALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGH 293
++A E I G + +VD+ G+ G + +A N+ R + W A++ +
Sbjct: 269 MQA--EHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLDATVWKALLAACRTHRN 326
Query: 294 ADMALSSFEEMTSMR-CEAVPNYVTLVCVLSACSRAGAVEK 333
A++A + + + +AVP YV L + S R G V +
Sbjct: 327 AELAEHAAAMVWRLDPTDAVP-YVMLSNLYSRAGRWGDVAR 366
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/509 (42%), Positives = 297/509 (58%), Gaps = 33/509 (6%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
PD T L AC S + G+ +HG + GF N+ + N +++ YG C E+G A ++
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 169 FD--------------------GIID-----------KNDVSWCSMLVVYVQNYEEENGC 197
F+ G ID KN SW SM+ +VQ +
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F+ E V P + + SVL+ACA + L+LGR VH + K+ + N+ V + L+DMY
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KCG +++A F +M ER +V W+A+I G A G A+ AL F EM + + PN VT
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK--PNGVT 245
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ +L ACS G +++G + F SMT YG+ P EHY CVVDL RAGL++ A+E I M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P++P VWGALL C+V+ +L A +L +LDP + G +V++SN++A RWE+A
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
VRK MKD G+KK +G S I+V +H F A D +H + +I + KL +MK GY P
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAP 425
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
T+ L D+EE+EK + HSEK+A+ FGL+ P G PIRI KNLR+C DCH+A K IS
Sbjct: 426 KTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIIS 485
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
GIV RE+IVRD NRFH F DG CSC D+W
Sbjct: 486 GIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 166/372 (44%), Gaps = 36/372 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P+ FT + KA L V GK +H L K G ++F+ ++Y G
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 61 KDDADKMFDEMPERNLATWN-------------------------------AYISNAVLG 89
DA +F++MP+R+ TWN + IS V
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+P AID F+ L P+ +T + L AC+D L LGR +H + +SGF NV VC
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N L+D Y KC + A+ VF + ++ VSW +M+ + + E +F + GV+
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 210 PKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P +L AC+ + ++ GR A + V I +VD++ + G +++A
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 269 AFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
MP + N V W A++GG + D+A + + ++ + YV + + + R
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 328 ---AGAVEKGMK 336
A V K MK
Sbjct: 361 WEDAARVRKLMK 372
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 31/240 (12%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P F S VL AC +++ + G+++H + K N+F+ + ++++YG CG + DA
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM--------TSM-----RC----- 309
+ F KMP+R+ V WN +I A +G D A F M TSM +C
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 310 ----------EAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
EAV PN VT+V VL+AC+ G ++ G +I + + K G K ++
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHVCNTLI 184
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
D+ + G ++ A + EM R +S W A++ ++G+ E + KL +G
Sbjct: 185 DMYVKCGCLENARRVFYEMEERTVVS-WSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 314/534 (58%), Gaps = 4/534 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLI 112
Y G +D ++F EMP RN+ +W + I GR + A+ F + G E P
Sbjct: 145 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 204
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T+C + AC++ S L G Q+H + + G+ + + L+ FY C ++ + VF G
Sbjct: 205 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 264
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ N V W +++ Y N + E+ ++F REGV P +S L++C + L+ GR
Sbjct: 265 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 324
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H AVK +E ++FVG++L+ MY +CG++ D + F ++ ++N+V WN++I G A G
Sbjct: 325 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 384
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL+ F +M +R P+ +T +LSACS +G +KG +F + + +
Sbjct: 385 CGMWALAFFNQM--VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLD 442
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC+VD+LGR+G ++ A E+I+ MP++ VW LL+AC ++ K E+ AA + L
Sbjct: 443 HYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDL 502
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P+ S +VLLSN++A+ RW + +R+EMK GI K G SWI++K + F + D S
Sbjct: 503 EPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRS 562
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H + I L L ++K GY+PD FAL+DVE+E+K + +HSE++A+ FGLI+
Sbjct: 563 HPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTV 622
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G I + KNLR+CGDCHSA K I+ IV R++IVRD+ RFH F DG CSC DYW
Sbjct: 623 EGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 12/335 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P T+ C+ A + G Q+HA K G D ++ + Y+ +D+
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F N+ W A ++ L + ++A+ F + R G P+ +F + LN+C
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR++H V+ G + +V V N L+ Y +C + V+F I KN VSW S++V
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 378
Query: 186 VYVQNYEEENGCQMFLTA-----RREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAV 239
Q +GC M+ A R VEP + + +LSAC+ + GR + +
Sbjct: 379 GCAQ-----HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 433
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
E + + +VD+ G+ G +++AE MP + N + W ++ ++A
Sbjct: 434 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 493
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ + + + YV L + ++ SR V +
Sbjct: 494 RAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSR 528
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 22/360 (6%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV++ Y++ D A ++F EMP +++ +WN+ I A F +
Sbjct: 41 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEM- 99
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKC-- 159
E ++++ +N LQ G+ G + F +++ N ++ YG C
Sbjct: 100 ---PERSVVSWTTMING-----FLQFGKIEVAEGLFYKMPFR-DIAAWNSMI--YGYCCN 148
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISS 217
V +F + +N +SW SM+ Q+ E +F GVE P
Sbjct: 149 GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCC 208
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
V++ACA + L G +HA K + ++ +AL+ Y C ++D+ F+ N
Sbjct: 209 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 268
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+V W A++ GY + AL F EM MR +PN + L++C A++ G +I
Sbjct: 269 VVIWTALVTGYGLNCKHEDALKVFGEM--MREGVLPNQSSFTSALNSCCGLEALDWGREI 326
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ +K G++ ++ + R G ++ I K + + +S W +++ C +G
Sbjct: 327 -HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS-WNSVIVGCAQHG 384
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE + PN +F + L G+++H A+K G DVFVG S MY + G
Sbjct: 295 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 354
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D +F + ++N+ +WN+ I G A+ F + R+ EPD ITF L+A
Sbjct: 355 LNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 414
Query: 121 CSDCSLLQLGRQLHGFL 137
CS + Q GR L +
Sbjct: 415 CSHSGMSQKGRCLFKYF 431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A+ VFD + + + M+ Y +NY ++ Q+F + V + MI C
Sbjct: 30 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIK----GCFD 85
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
A L + R + E ++ + +++ + + G I+ AE F KMP R++ WN++
Sbjct: 86 CADLTMARKL----FDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 141
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT-L 343
I GY G + L F+EM C V ++ +++ + G E+ + +F M
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMP---CRNVISWTSMI---GGLDQHGRSEEALGLFRQMMGC 195
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+KP + Y CV+ A + + +I
Sbjct: 196 GVEVKPTSSTYCCVITACANASALYQGVQI 225
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 314/534 (58%), Gaps = 4/534 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLI 112
Y G +D ++F EMP RN+ +W + I GR + A+ F + G E P
Sbjct: 129 YCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSS 188
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T+C + AC++ S L G Q+H + + G+ + + L+ FY C ++ + VF G
Sbjct: 189 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 248
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ N V W +++ Y N + E+ ++F REGV P +S L++C + L+ GR
Sbjct: 249 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGR 308
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H AVK +E ++FVG++L+ MY +CG++ D + F ++ ++N+V WN++I G A G
Sbjct: 309 EIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHG 368
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL+ F +M +R P+ +T +LSACS +G +KG +F + + +
Sbjct: 369 CGMWALAFFNQM--VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLD 426
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HYAC+VD+LGR+G ++ A E+I+ MP++ VW LL+AC ++ K E+ AA + L
Sbjct: 427 HYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDL 486
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P+ S +VLLSN++A+ RW + +R+EMK GI K G SWI++K + F + D S
Sbjct: 487 EPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRS 546
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H + I L L ++K GY+PD FAL+DVE+E+K + +HSE++A+ FGLI+
Sbjct: 547 HPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTV 606
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G I + KNLR+CGDCHSA K I+ IV R++IVRD+ RFH F DG CSC DYW
Sbjct: 607 EGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 12/335 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P T+ C+ A + G Q+HA K G D ++ + Y+ +D+
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F N+ W A ++ L + ++A+ F + R G P+ +F + LN+C
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 302
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L GR++H V+ G + +V V N L+ Y +C + V+F I KN VSW S++V
Sbjct: 303 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 362
Query: 186 VYVQNYEEENGCQMFLTA-----RREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAV 239
Q +GC M+ A R VEP + + +LSAC+ + GR + +
Sbjct: 363 GCAQ-----HGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 417
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
E + + +VD+ G+ G +++AE MP + N + W ++ ++A
Sbjct: 418 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 477
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ + + + YV L + ++ SR V +
Sbjct: 478 RAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSR 512
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 22/360 (6%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV++ Y++ D A ++F EMP +++ +WN+ I A F +
Sbjct: 25 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEM- 83
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGR--QLHGFLVRSGFDGNVSVCNGLVDFYGKC-- 159
E ++++ +N LQ G+ G + F +++ N ++ YG C
Sbjct: 84 ---PERSVVSWTTMING-----FLQFGKIEVAEGLFYKMPFR-DIAAWNSMI--YGYCCN 132
Query: 160 NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISS 217
V +F + +N +SW SM+ Q+ E +F GVE P
Sbjct: 133 GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCC 192
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
V++ACA + L G +HA K + ++ +AL+ Y C ++D+ F+ N
Sbjct: 193 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 252
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+V W A++ GY + AL F EM MR +PN + L++C A++ G +I
Sbjct: 253 VVIWTALVTGYGLNCKHEDALKVFGEM--MREGVLPNQSSFTSALNSCCGLEALDWGREI 310
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++ +K G++ ++ + R G ++ I K + + +S W +++ C +G
Sbjct: 311 -HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS-WNSVIVGCAQHG 368
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE + PN +F + L G+++H A+K G DVFVG S MY + G
Sbjct: 279 MMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 338
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D +F + ++N+ +WN+ I G A+ F + R+ EPD ITF L+A
Sbjct: 339 LNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 398
Query: 121 CSDCSLLQLGRQLHGFL 137
CS + Q GR L +
Sbjct: 399 CSHSGMSQKGRCLFKYF 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A+ VFD + + + M+ Y +NY ++ Q+F + V + MI C
Sbjct: 14 ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIK----GCFD 69
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
A L + R + E ++ + +++ + + G I+ AE F KMP R++ WN++
Sbjct: 70 CADLTMARKL----FDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 125
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT-L 343
I GY G + L F+EM C V ++ +++ + G E+ + +F M
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMP---CRNVISWTSMI---GGLDQHGRSEEALGLFRQMMGC 179
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+KP + Y CV+ A + + +I
Sbjct: 180 GVEVKPTSSTYCCVITACANASALYQGVQI 209
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 330/602 (54%), Gaps = 41/602 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK- 66
PN FTFP L K+ + G+Q+H LK G D++V S MY++ G +DA K
Sbjct: 73 PNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKV 132
Query: 67 ------------------------------MFDEMPERNLATWNAYISNAVLGGRPKNAI 96
MFDE+P +++ +WNA IS G K A+
Sbjct: 133 FDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKAL 192
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F + +T +PD T ++AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 193 ELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLY 252
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC EV A + +G+ +K+ +SW +++ Y + +F R G P D +
Sbjct: 253 SKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 312
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVG-----SALVDMYGKCGSIQDA-EIAF 270
S+L ACA + +++GR +H V + ++G + ++L+DMY KCG I A +++
Sbjct: 313 SILPACAHLGAIDIGRWIH-VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSD 371
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+ R+L WNA+I G+A G A+ A F M E P+ +T V +LSACS +G
Sbjct: 372 SSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIE--PDDITFVGLLSACSHSGM 429
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ G IF SM Y I P EHY C++DLLG +GL A E+I MPM P +W +LL
Sbjct: 430 LDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLL 489
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
AC+++G ELG A L K++P + G++VLLSN++A G+W E +R + D G+KK
Sbjct: 490 KACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKK 549
Query: 451 GA-GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
GCS I + + +H F D H +N EI ML ++ ++ AG++PDT+ L ++EEE
Sbjct: 550 KVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEE 609
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
K + HHSEK+A+AFGLI+ PG + I KNLR+C +CH A K IS I RE+I RD
Sbjct: 610 WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDR 669
Query: 570 NR 571
R
Sbjct: 670 TR 671
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 175/369 (47%), Gaps = 36/369 (9%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F+ +PE N WN L P +A+ ++ + G P+ TF L +C+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------------- 170
+ G+Q+HG +++ GFD ++ V L+ Y + + A+ VFD
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 171 -------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
G I+ K+ VSW +M+ Y + + ++F + V+P +
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+++V+SACA+ +ELGR VH+ N+ + +AL+D+Y KCG ++ A
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
+ ++++ WN +IGGY H AL F+EM +R PN VT++ +L AC+ GA++
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEM--LRSGETPNDVTMLSILPACAHLGAID 325
Query: 333 KG--MKIFYSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
G + ++ LK + A ++D+ + G +D A ++ ++S W A+
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385
Query: 390 LNACRVYGK 398
+ ++G+
Sbjct: 386 IFGFAMHGR 394
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 156/341 (45%), Gaps = 9/341 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++ + + +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNV-----SVCNGLVDFYGKCNEVGLAKVVFD-GIID 174
C+ + +GR +H ++ + G V S+ L+D Y KC ++ A V D +
Sbjct: 318 CAHLGAIDIGRWIHVYIDKK-LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ +W +M+ + + +F R+ G+EP D +LSAC+ L+LGR++
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436
Query: 235 -HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
++ + + ++D+ G G ++AE N MP E + V W +++ G
Sbjct: 437 FRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ ++ S +++ + E +YV L + + + V K
Sbjct: 497 NLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXK 537
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/550 (39%), Positives = 317/550 (57%), Gaps = 42/550 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE N+++F A + L G Q+HAL KS DV++G + DMYSK G
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F M ERNL TWN+ I+ G A++ F+ + +G EPD +T + ++A
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 121 CSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFD--------- 170
C+ L+ G Q+H +V++ F ++ + N LVD Y KC++V A+ VFD
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVS 317
Query: 171 ----------------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ +N VSW +++ Y QN E E ++F +RE +
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI 377
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVK------ACVEGNIFVGSALVDMYGKCGS 262
P + ++LSACA +A L LGR H +K + E +IFVG++L+DMY KCGS
Sbjct: 378 WPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGS 437
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
I+D F KM ER+ V WNAII GYA G+ AL F +M + C P++VT++ VL
Sbjct: 438 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM--LVCGEKPDHVTMIGVL 495
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
ACS AG VE+G F+SM ++G+ P +HY C+VDLLGRAG ++ A +I+ MP+ P
Sbjct: 496 CACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPD 554
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
VWG+LL AC+V+G E+G+ AA+ L ++DP +SG +VLLSNM+A GRW + VRK
Sbjct: 555 AVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKL 614
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTN-F 501
M+ G+ K GCSWI V++R+H+F KD SH +I ++L L E+MK GYIPD N F
Sbjct: 615 MRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDF 674
Query: 502 ALYDVEEEEK 511
YD + + +
Sbjct: 675 EAYDEQSKSE 684
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 209/457 (45%), Gaps = 73/457 (15%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R+ PN F L + + +HA L + ++F+ D+Y K D
Sbjct: 8 RDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLD 67
Query: 63 DADKMFDEMPERNLATWNAYIS--------------------------NAVLGG-----R 91
DA K+FD MP+RN TWN+ IS N+++ G R
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+ +++ F+ + R + +F + L+AC+ L +G Q+H + +S + +V + +
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L+D Y KC V A+ VF G+I++N V+W S++ Y QN ++F+ G+EP
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPD 247
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKC---------- 260
+ ++SV+SACA + L+ G +HA VK ++ +G+ALVDMY KC
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 261 ---------------------GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
S++ A F+KM +RN+V WNA+I GY G + AL
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG--IKPGAEHYACV 357
F + R P + T +LSAC+ + G + ++ LK G + GAE V
Sbjct: 368 LFRLLK--RESIWPTHYTFGNLLSACANLADLLLGRQA-HTHVLKQGFEFQSGAESDIFV 424
Query: 358 ----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+D+ + G ++ + ++M R +S W A++
Sbjct: 425 GNSLIDMYMKCGSIEDGSRVFEKMKERDCVS-WNAII 460
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 314/544 (57%), Gaps = 11/544 (2%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV + Y + G +A +FDEMP+RN+ +W A IS G+ A F
Sbjct: 173 DVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLF---- 228
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ + +++ A L ++ L + D V+ CN ++ +G+ V
Sbjct: 229 EVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMP----DHPVAACNAMMVGFGQHGMVD 284
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
AK +F+ + ++D +W +M+ VY QN F G+ P S+L+ CA
Sbjct: 285 AAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCA 344
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+A + GR +HA ++ + ++F SAL+ MY KCG++ A+ FN +++V WN+
Sbjct: 345 ALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNS 404
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I GYA G + AL F+++ R P+ +T + VL+ACS G V++G +IF SM +
Sbjct: 405 MITGYAQHGLGEEALGIFDDLRLARM--APDGITYIGVLTACSYTGKVKEGREIFNSMGM 462
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
I+ GA HY+C+VDLLGRAGLVD A ++I MP+ P +WGAL+ ACR++ E+
Sbjct: 463 NSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAE 522
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
+AA L +L+P +G +VLLS+++ +TGRWE+A +RK + + K GCSWI +
Sbjct: 523 VAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMV 582
Query: 464 HIFQAKDT-SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKI 522
H+F + D SH + I ML +L + +GY D +F L+DV+EE+K + +HSE+
Sbjct: 583 HLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQ 642
Query: 523 ALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSC 582
A+A+GL+ +P G+PIR+ KNLR+CGDCHSA K I+ I RE+I+RD NRFH F DG CSC
Sbjct: 643 AVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSC 702
Query: 583 SDYW 586
DYW
Sbjct: 703 RDYW 706
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I PN +F + +AL G++LHA L+ DVF + MY K G D A
Sbjct: 329 IRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAK 388
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ +++ WN+ I+ G + A+ F +LR PD IT+ L ACS
Sbjct: 389 RVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTG 448
Query: 126 LLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
++ GR++ + + S + + +VD G+ V A + + + ++ + + W ++
Sbjct: 449 KVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGAL 508
Query: 184 L 184
+
Sbjct: 509 M 509
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTA 203
V N + + + + A+ FD + + S+ +++ Y +N+ + +F + +
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC----VEGNIFVGSALVDMYGK 259
R G S A IAGL L R A A + ++ ++L+ Y +
Sbjct: 77 RDLG------------SYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVR 124
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
G + DA F++MPERN V + ++GG+ G + A F+EM + V
Sbjct: 125 HGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPD------KDVVART 178
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
+LS +AG + + +F M K + ++ + G V A ++ + MP
Sbjct: 179 AMLSGYCQAGRITEARALFDEMP-----KRNVVSWTAMISGYAQNGKVILARKLFEVMPD 233
Query: 380 RPTISVWGALLNACRVYGKPELGRIA-ADNLFKLDPN 415
R +S W A+L G + G + A++LF P+
Sbjct: 234 RNEVS-WTAML-----VGYIQAGHVEDAEDLFNAMPD 264
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 332/599 (55%), Gaps = 25/599 (4%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDAD 65
+PN++T KA + G +H L +++G Q HDV V S +YSK G DA
Sbjct: 103 APNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDV-VASSLVLVYSKGGRIGDAR 161
Query: 66 KMFDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACS 122
++FD +ATWNA +S G ++A+ F +RR G+ PD TF + L ACS
Sbjct: 162 RVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACS 221
Query: 123 DCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ G Q+H + SGF N + LVD Y KC + +A VF+ + KN + W
Sbjct: 222 GLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQW 281
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V + Q + ++F R G P ++SSV+ A A +E GR VH +K
Sbjct: 282 TAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK 341
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ G+++VDMY KCG +AE F +M N+V W ++ G G A++
Sbjct: 342 DPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVAL 401
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + E P+ VT + +LSACS AG V++ + F + ++P AEHYAC+VDL
Sbjct: 402 FEEMRAGGVE--PDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 459
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A ++I+ MPM PT+ VW LL+ACRV+ +GR A D L +D ++ N+
Sbjct: 460 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNY 519
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ---AKDTSHERNT 477
V LSN+ A G W E VR M+ G+KK GCSW+ V +H F ++ +H +
Sbjct: 520 VTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAG 579
Query: 478 EIQAML----TKLREEMKAAGY-IPDTNFALYDVEEEEKMTEVGHHSEKIALAF-----G 527
+I+ +L T++RE++ GY D FAL+DV+EE + + HSE++A+ G
Sbjct: 580 DIRRVLRDMETRMREQL---GYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNG 636
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ G PIR+ KNLR+CGDCH FK +S +V R ++VRD NRFHRF G CSC DYW
Sbjct: 637 VDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 178/400 (44%), Gaps = 21/400 (5%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +AS+ G QLH K G D +G + DMY K G D A ++F M +RN
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDCSLLQLGRQLH 134
+ +W A + + G + +R P+ T A L AC G +H
Sbjct: 70 VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIH 129
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSMLVVYVQNYEE 193
G VR+G+ + V + LV Y K +G A+ VFDG + +W +M+ Y
Sbjct: 130 GLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189
Query: 194 ENGCQMFLTARR-EGV-EPKDFMISSVLSACARIAGLELGRSVHAVAVKA--CVEGNIFV 249
+ +F RR EG +P +F +S+L AC+ + G VHA + N +
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
ALVDMY KC + A F ++ +N++ W A++ G+A +G AL F R
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRF--WRS 307
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PGAEHYA--CVVDLLGRAG 365
A P+ L V+ + VE+G ++ YGIK G + A +VD+ + G
Sbjct: 308 GARPDSHVLSSVVGVLADFALVEQGRQVHC-----YGIKDPTGTDVSAGNSIVDMYLKCG 362
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
L D A + +EM P + W ++N GK LGR A
Sbjct: 363 LPDEAERMFREMRA-PNVVSWTTMVNG---LGKHGLGREA 398
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ MI+ +L A AR + L G +H K + +G+ L+DMY KCG + A F
Sbjct: 3 RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
M +RN+V W A++ G+ G A L EM + EA PN TL L AC G
Sbjct: 63 GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTA-SEAAPNEYTLSASLKACCVVGD 121
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G+ I + + ++ G + + +V + + G + A + + I+ W A++
Sbjct: 122 TAAGVGI-HGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMV 180
Query: 391 NA 392
+
Sbjct: 181 SG 182
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/519 (39%), Positives = 310/519 (59%), Gaps = 5/519 (0%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT--GGEPDLITFCAFLNACSDCSLLQ 128
MPER+L WN+ IS G + + R+ G P+ +TF + ++AC +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G +HG +++SG V V N L++ YGK ++ + +F+ + KN VSW +M+V+++
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN E G F +R G++P +VL C I + L + +H + + N
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTC 180
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+ +AL+D+Y K G ++D+ F ++ + + W A++ YA G+ A+ FE M
Sbjct: 181 ITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYG 240
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
P++VT +L+ACS +G VE+G F +M+ +Y I+P +HY+C+VDL+GR+GL+
Sbjct: 241 LS--PDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQ 298
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
AY +IKEMPM P+ VWGALL ACRVY +LG AA LF+L+P D N+++LSN+++
Sbjct: 299 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYS 358
Query: 429 ATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLRE 488
A+G W++A +R MK G+ + +G S+I N+IH F D SH + +IQ L ++R+
Sbjct: 359 ASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 418
Query: 489 EMKAA-GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
+MK+ G+ T F L+DV+E+ K + HSEKIA+AFGL+ I P PI I KNLRICG
Sbjct: 419 KMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICG 478
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH K IS I R +I+RD+ RFH F +G CSC DYW
Sbjct: 479 DCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 1 MRREC-ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR E PN+ TF + A G +H L +KSG + +V V + ++Y KTG
Sbjct: 33 MRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTG 92
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ K+F+++ +NL +WN I + G + + F R G +PD TF A L
Sbjct: 93 DLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLR 152
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C D +++L + +HG ++ GF+ N + L+D Y K + + VF I + ++
Sbjct: 153 VCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMA 212
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR-SVHAVA 238
W +ML Y + + + F G+ P + +L+AC+ +E GR ++
Sbjct: 213 WTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMS 272
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+ +E + S +VD+ G+ G +QDA +MP E + W A++G +
Sbjct: 273 KRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLG 332
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ + + + NY+ L + SA
Sbjct: 333 TKAAKRLFELEPRDGRNYIMLSNIYSA 359
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 327/575 (56%), Gaps = 34/575 (5%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D V + + GL D+A ++ + PERN+ +W + I+ GRP +A+ F +
Sbjct: 170 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 229
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
G PD + L+ACS L LGR LH + + ++ L+D Y KC ++
Sbjct: 230 SDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIA 289
Query: 164 LAKVVFDG------------IID--------------------KNDVSWCSMLVVYVQNY 191
A+ VFD IID ++ +++ SM+ Y+ +
Sbjct: 290 QAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSG 349
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ Q+F+ RR G+ +F + S+L+ACA + L GR++HA + VE ++++G+
Sbjct: 350 RLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGT 409
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
AL+DMY KCG + +A F++M ER++ W A+I G A G AL SF +M R
Sbjct: 410 ALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMK--RDGF 467
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
P VT + VL+ACS + +++G F M + + P EHY C++DLL R+GL+D A
Sbjct: 468 QPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAM 527
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+++ MPM+P +WG++L+ACRV+ +L R AA++L KL P + +V L N++ +
Sbjct: 528 HLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSR 587
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+W +A VR M++ G+KK AG S I+V ++H F A D SH EI AM+ ++ +K
Sbjct: 588 QWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLK 647
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
+ GY P T+ DV+EEEK + HSEKIA+AFGLI++PP +PI I KNLR+C DCHS
Sbjct: 648 SVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHS 707
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
A K +S + RE+IVRD +RFH F DG CSC+D+W
Sbjct: 708 AIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + ++FT L A ++L G+ LHA + DV++G + DMY K G
Sbjct: 361 MRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGR 420
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +F M ER++ TW A I+ G K+A+++F ++R G +P +T+ A L A
Sbjct: 421 VDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTA 480
Query: 121 CSDCSLLQLGRQLHGFLVRS--GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKND 177
CS SLL GR LH +RS V ++D + + A + + + N
Sbjct: 481 CSHSSLLDEGR-LHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNA 539
Query: 178 VSWCSML 184
V W S+L
Sbjct: 540 VIWGSIL 546
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V + L+ MY G DA AF+++P ++ V W +IGG G D A +
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
N V+ +++ SRAG + F M L G+ P
Sbjct: 201 ------NVVSWTSLIAGYSRAGRPADAVYCFNCM-LSDGVAP 235
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/618 (34%), Positives = 340/618 (55%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + + T+ A + L GKQLHA +++ D +V + ++Y+K+G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F+ + +RN W IS + G +++ F +R D ++
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
C L LGRQLH ++SG V V N L+ Y KC+
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 440
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
V A+ FDG+ +KN ++W +ML Y+Q+ EE+G +M+ + E V
Sbjct: 441 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 500
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA + +LG + VK + + V +A++ MY KCG I +A
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 560
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A+ F+++ ++ A P+Y++ V VLS CS +
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDI--LKRGAKPDYISYVAVLSGCSHS 618
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F M + I PG EH++C+VDLLGRAG + A ++I +MPM+PT VWGA
Sbjct: 619 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 678
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++L++ ++A G+ +++ +RK M+D GI
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V N++H+F+A D SH + I+ L +L E++ GY V
Sbjct: 739 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY----------VRT 788
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+ +E+ HHSEK+A+AFGL+ +P +PI I KNLRICGDCH+ K IS + GRE ++RD
Sbjct: 789 DSTRSEI-HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRD 847
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 848 AVRFHHFNGGSCSCGDYW 865
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 181/373 (48%), Gaps = 37/373 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK---------SGQIHDVFVGCSAFDM---- 54
PN FT C K+ AL QL A+ K + + D+FV C A D+
Sbjct: 136 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 195
Query: 55 ------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
Y KT D A ++FD MPER++ +WN +S GR + A+
Sbjct: 196 FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 255
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D ++++ G D T+ + L AC+ S L+ G+QLH ++R+ + V + LV+ Y
Sbjct: 256 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELY 315
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
K AK VF+ + D+N+V+W ++ ++Q ++F R E + F ++
Sbjct: 316 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 375
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+++S C L LGR +H++ +K+ + V ++L+ MY KC ++Q AE F M E+
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 435
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W ++I Y+ G+ A F+ M+ N +T +L A + GA E G++
Sbjct: 436 DIVSWTSMITAYSQVGNVAKAREFFDGMSE------KNVITWNAMLGAYIQHGAEEDGLR 489
Query: 337 IFYSMTLKYGIKP 349
++ M + ++P
Sbjct: 490 MYKVMLSEEYVRP 502
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 38/382 (9%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA ++F MP R++A+WN +S + +++ F+++ R+G P+ T
Sbjct: 81 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 140
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV------ 167
+ +C L QL + + + V LVD + +C V LA
Sbjct: 141 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 200
Query: 168 -------------------------VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
+FD + +++ VSW M+ Q+ M +
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ +GV +S L+ACAR++ L G+ +HA ++ + +V SALV++Y K G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A+ FN + +RN V W +I G+ G S E MR E + + L +
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYG---CFTESVELFNQMRAELMTLDQFALATL 377
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S C + G ++ +S+ LK G ++ + + + A I + M +
Sbjct: 378 ISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436
Query: 382 TISVWGALLNACRVYGKPELGR 403
+S W +++ A G R
Sbjct: 437 IVS-WTSMITAYSQVGNVAKAR 457
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L+A C L R+L L+ NV N +++ Y K + A +F + +
Sbjct: 44 TLLHAYLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 100
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSV 234
+ SW +++ Y Q+ + + FL+ R G P F ++ + +C + L +
Sbjct: 101 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 160
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
A+ K + + V +ALVDM+ +CG++ A F ++ E + C N+++ GY
Sbjct: 161 LAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGV 220
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D AL F+ M + V+ ++SA S++G V + + + M K G++ + Y
Sbjct: 221 DHALELFDSMPE------RDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTY 273
Query: 355 A 355
Sbjct: 274 T 274
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +++ Y K G + DA F +MP R++ WN ++ GY ++L +F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ PN TL C + +C G +++ +M K+ + +E A +VD+ R G
Sbjct: 130 R-SGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCG 187
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNA-CRVYGKPELGRIAADNLFKLDPN-DSGNHVLL 423
VD A + + PT+ ++L + YG A LF P D + ++
Sbjct: 188 AVDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDH-----ALELFDSMPERDVVSWNMM 241
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIK 449
+ + +GR EA + +M+ G++
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVR 267
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 330/587 (56%), Gaps = 11/587 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR I P+ T + A L G QLH+ +++ ++ V S MY G
Sbjct: 227 MRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGH 286
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A+ +F M R++ +W IS V P A++ + + TG PD +T + L+A
Sbjct: 287 WKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSA 346
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L +G +LH R+G V V N L+D Y KC + A +F I DK+ +SW
Sbjct: 347 CASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISW 406
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGV---EPKDFMISSVLSACARIAGLELGRSVHAV 237
S+ + N C L R+ + +P + S LSACAR+ L G+ +HA
Sbjct: 407 TSV----INGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAH 462
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+KA + + F+ +A++D+Y +CG ++ A FN + E+++ WN ++ GYA +G M
Sbjct: 463 ALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMV 521
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
+ F+ M + E P+ VT + +L ACSR+G V +G++ F M + Y I P +HYACV
Sbjct: 522 MELFKRM--VESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACV 579
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG ++ A+E I+ MP++P ++WGALLNACR++ LG +AA ++FK D
Sbjct: 580 VDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESI 639
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G ++LL N++A +G+W+E VR+ MK+ G+ GCSW+ VK ++H F + D H +
Sbjct: 640 GYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQ 699
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI +L E+MK +G+ ++ ++ + G HSE+ A+A+ LI PG+PI
Sbjct: 700 EINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCG-HSERQAIAYSLINSAPGMPI 758
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
+TKNL +C CHS KFIS IV RE+ VRD +FH F DG CSC D
Sbjct: 759 WVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 189/360 (52%), Gaps = 4/360 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ +TFP + ++ + V G+++HA ++ DV V + MY K G A
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R+ +WNA IS ++ F +R +PDL+T + ++AC
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LG QLH ++VR+ +DGN+SV N L+ Y A+ VF G+ ++ VSW +++
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
V N + + + T G P + I+SVLSACA + L++G +H +A +
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ V ++L+DMY KC I+ A F+++P+++++ W ++I G AL F +M
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ PN VTL+ LSAC+R GA+ G +I ++ LK G+ ++DL R G
Sbjct: 431 ---LKSKPNSVTLISALSACARVGALMCGKEI-HAHALKAGMGFDGFLPNAILDLYVRCG 486
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 183/355 (51%), Gaps = 12/355 (3%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRR 104
V +G + M+ + G +A +F M ER+L +WN + G A+ + +
Sbjct: 69 VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G PD+ TF + L +C+ L GR++H +VR FD +V V N L+ Y KC +V
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A+++FD + ++ +SW +M+ Y +N E G ++F R ++P ++SV+SAC
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ LG +H+ V+ +GNI V ++L+ MY G ++AE F+ M R++V W I
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G D AL +++ M +P+ VT+ VLSAC+ G ++ GMK+ +
Sbjct: 309 ISGCVDNLLPDKALETYKTMEI--TGTMPDEVTIASVLSACASLGQLDMGMKLH-----E 361
Query: 345 YGIKPGAEHYACV----VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+ G Y V +D+ + +++A EI ++P + IS W +++N R+
Sbjct: 362 LAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS-WTSVINGLRI 415
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
++ +G+AL+ M+ + G + +A F +M ER+L WN ++GGY G D AL + +
Sbjct: 68 SVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRI- 126
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ T VL +C+ A + +G ++ ++ +++ + ++ + + G
Sbjct: 127 -LWAGIRPDVYTFPSVLRSCAGAMDLVRGREV-HAHVVRFDFDMDVDVVNALITMYVKCG 184
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLN 391
V A + +MP R IS W A+++
Sbjct: 185 DVVSARMLFDKMPTRDRIS-WNAMIS 209
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 332/599 (55%), Gaps = 25/599 (4%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDAD 65
+PN++T KA + G +H L +++G Q HDV V S +YSK G DA
Sbjct: 56 APNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDV-VASSLVLVYSKGGRIGDAR 114
Query: 66 KMFDEMP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACS 122
++FD +ATWNA +S G ++A+ F +RR G+ PD TF + L ACS
Sbjct: 115 RVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACS 174
Query: 123 DCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ G Q+H + SGF N + LVD Y KC + +A VF+ + KN + W
Sbjct: 175 GLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQW 234
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++V + Q + ++F R G P ++SSV+ A A +E GR VH +K
Sbjct: 235 TAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK 294
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++ G+++VDMY KCG +AE F +M N+V W ++ G G A++
Sbjct: 295 DPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVAL 354
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
FEEM + E P+ VT + +LSACS AG V++ + F + ++P AEHYAC+VDL
Sbjct: 355 FEEMRAGGVE--PDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 412
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG + A ++I+ MPM PT+ VW LL+ACRV+ +GR A D L +D ++ N+
Sbjct: 413 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNY 472
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ---AKDTSHERNT 477
V LSN+ A G W E VR M+ G+KK GCSW+ V +H F ++ +H +
Sbjct: 473 VTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAG 532
Query: 478 EIQAML----TKLREEMKAAGY-IPDTNFALYDVEEEEKMTEVGHHSEKIALAF-----G 527
+I+ +L T++RE++ GY D FAL+DV+EE + + HSE++A+ G
Sbjct: 533 DIRRVLRDMETRMREQL---GYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNG 589
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ G PIR+ KNLR+CGDCH FK +S +V R ++VRD NRFHRF G CSC DYW
Sbjct: 590 VDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 21/362 (5%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLI 112
MY K G D A ++F M +RN+ +W A + + G + +R P+
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
T A L AC G +HG VR+G+ + V + LV Y K +G A+ VFDG
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 173 -IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR-EGV-EPKDFMISSVLSACARIAGLE 229
+ +W +M+ Y + +F RR EG +P +F +S+L AC+ +
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 230 LGRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
G VHA + N + ALVDMY KC + A F ++ +N++ W A++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
+A +G AL F R A P+ L V+ + VE+G ++ YGI
Sbjct: 241 HAQEGQVTEALELFRRF--WRSGARPDSHVLSSVVGVLADFALVEQGRQVHC-----YGI 293
Query: 348 K--PGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
K G + A +VD+ + GL D A + +EM P + W ++N GK LGR
Sbjct: 294 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRA-PNVVSWTTMVNG---LGKHGLGR 349
Query: 404 IA 405
A
Sbjct: 350 EA 351
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/618 (34%), Positives = 340/618 (55%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + + T+ A + L GKQLHA +++ D +V + ++Y+K+G
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F+ + +RN W IS + G +++ F +R D ++
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
C L LGRQLH ++SG V V N L+ Y KC+
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSW 460
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
V A+ FDG+ +KN ++W +ML Y+Q+ EE+G +M+ + E V
Sbjct: 461 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 520
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA + +LG + VK + + V +A++ MY KCG I +A
Sbjct: 521 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 580
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A+ F+++ ++ A P+Y++ V VLS CS +
Sbjct: 581 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDI--LKRGAKPDYISYVAVLSGCSHS 638
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F M + I PG EH++C+VDLLGRAG + A ++I +MPM+PT VWGA
Sbjct: 639 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 698
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++L++ ++A G+ +++ +RK M+D GI
Sbjct: 699 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 758
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V N++H+F+A D SH + I+ L +L E++ GY V
Sbjct: 759 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY----------VRT 808
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+ +E+ HHSEK+A+AFGL+ +P +PI I KNLRICGDCH+ K IS + GRE ++RD
Sbjct: 809 DSTRSEI-HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRD 867
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 868 AVRFHHFNGGSCSCGDYW 885
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 181/373 (48%), Gaps = 37/373 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK---------SGQIHDVFVGCSAFDM---- 54
PN FT C K+ AL QL A+ K + + D+FV C A D+
Sbjct: 156 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 215
Query: 55 ------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
Y KT D A ++FD MPER++ +WN +S GR + A+
Sbjct: 216 FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 275
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D ++++ G D T+ + L AC+ S L+ G+QLH ++R+ + V + LV+ Y
Sbjct: 276 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELY 335
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
K AK VF+ + D+N+V+W ++ ++Q ++F R E + F ++
Sbjct: 336 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 395
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+++S C L LGR +H++ +K+ + V ++L+ MY KC ++Q AE F M E+
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 455
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W ++I Y+ G+ A F+ M+ N +T +L A + GA E G++
Sbjct: 456 DIVSWTSMITAYSQVGNVAKAREFFDGMSE------KNVITWNAMLGAYIQHGAEEDGLR 509
Query: 337 IFYSMTLKYGIKP 349
++ M + ++P
Sbjct: 510 MYKVMLSEEYVRP 522
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 38/382 (9%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA ++F MP R++A+WN +S + +++ F+++ R+G P+ T
Sbjct: 101 YAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFT 160
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV------ 167
+ +C L QL + + + V LVD + +C V LA
Sbjct: 161 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 220
Query: 168 -------------------------VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
+FD + +++ VSW M+ Q+ M +
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ +GV +S L+ACAR++ L G+ +HA ++ + +V SALV++Y K G
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A+ FN + +RN V W +I G+ G S E MR E + + L +
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYG---CFTESVELFNQMRAELMTLDQFALATL 397
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S C + G ++ +S+ LK G ++ + + + A I + M +
Sbjct: 398 ISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456
Query: 382 TISVWGALLNACRVYGKPELGR 403
+S W +++ A G R
Sbjct: 457 IVS-WTSMITAYSQVGNVAKAR 477
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 11/239 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+A C L R+L L+ NV N +++ Y K + A +F + ++
Sbjct: 65 LLHAYLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARD 121
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSVH 235
SW +++ Y Q+ + + FL+ R G P F ++ + +C + L +
Sbjct: 122 VASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL 181
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A+ K + + V +ALVDM+ +CG++ A F ++ E + C N+++ GY D
Sbjct: 182 AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 241
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
AL F+ M + V+ ++SA S++G V + + + M K G++ + Y
Sbjct: 242 HALELFDSMPE------RDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTY 293
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +++ Y K G + DA F +MP R++ WN ++ GY ++L +F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ PN TL C + +C G +++ +M K+ + +E A +VD+ R G
Sbjct: 150 R-SGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCG 207
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNA-CRVYGKPELGRIAADNLFKLDPN-DSGNHVLL 423
VD A + + PT+ ++L + YG A LF P D + ++
Sbjct: 208 AVDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDH-----ALELFDSMPERDVVSWNMM 261
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIK 449
+ + +GR EA + +M+ G++
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVR 287
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 338/617 (54%), Gaps = 49/617 (7%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDE 70
FP + + + H+ KQ+HA +K+GQIH + + ++ A K F +
Sbjct: 19 FPQISRCKTTRHL----KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQ 74
Query: 71 MPERNLATWNAYISNAVLGGRPK----NAIDAFINLRR--TGG--EPDLITFCAFLNACS 122
+ N +WN I N+++A + T G EP+ TF L AC+
Sbjct: 75 IHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACA 134
Query: 123 DCSLLQLGRQLHGFLVRSG--------------------------------FDGNVSVCN 150
+ ++ G+QLHGF+V+ G +GNV + N
Sbjct: 135 KLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWN 194
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
++D Y + ++ ++ +FD + +K+ VSW M+ QN + +MF + V P
Sbjct: 195 VMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPP 254
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ SVL A +R+ +ELG+ VH A K +E + +GSAL+DMY KCGSI A F
Sbjct: 255 NYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVF 314
Query: 271 NKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+ ++N + W+AIIGG A G A AL F M + P+ V + VLSACS AG
Sbjct: 315 EGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQ--QAGVTPSDVVYIGVLSACSHAG 372
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
VE+G I+Y M G+ P EHY C+VDLLGRAG ++ A ++I MP++P + AL
Sbjct: 373 LVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKAL 432
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L AC+++G E+G A L P+DSG++V LSNMFA+ G WE VR +MK++ I+
Sbjct: 433 LGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIR 492
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
K GCSWI + IH F +D SH R I +ML ++ + +++ GY P+T L +++E+
Sbjct: 493 KDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEK 552
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
EK + + +HSEKIA+AFGLI+ P P++I KNLR+C DCHS+ K +S I R++IVRD
Sbjct: 553 EKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDR 612
Query: 570 NRFHRFWDGYCSCSDYW 586
RFH F +G CSC DYW
Sbjct: 613 KRFHHFENGSCSCMDYW 629
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 37/327 (11%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN FTFPC+ KA + L GKQLH +K G + D FV + +Y G DA
Sbjct: 119 VEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAH 178
Query: 66 --------------------------------KMFDEMPERNLATWNAYISNAVLGGRPK 93
++FD MP +++ +WN IS G K
Sbjct: 179 VLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFK 238
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
AI+ F +++ P+ +T + L A S ++LG+ +H F ++ + + + + L+
Sbjct: 239 EAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALI 298
Query: 154 DFYGKCNEVGLAKVVFDGIID-KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
D Y KC + A VF+GI + KN ++W +++ + + F ++ GV P D
Sbjct: 299 DMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSD 358
Query: 213 FMISSVLSACARIAGLELGRSV--HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ VLSAC+ +E GRS+ H V + + G +VD+ G+ G +++AE
Sbjct: 359 VVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYG-CMVDLLGRAGCLEEAEQLI 417
Query: 271 NKMPER-NLVCWNAIIGGYAHQGHADM 296
MP + + V A++G G+ +M
Sbjct: 418 LNMPVKPDDVILKALLGACKMHGNIEM 444
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 330/576 (57%), Gaps = 3/576 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T +F + + G+ +H++ +K+ + + DMYSK G D A +F EM
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+R++ ++ + I+ G A+ F + G PD+ T A LN C+ LL G+
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++ + ++ V N L+D Y KC + A++VF + K+ +SW +++ Y +N
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 192 EEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+F L + P + ++ VL ACA ++ + GR +H ++ + V
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++LVDMY KCG++ A + F+ + ++LV W +I GY G A++ F +M E
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
A + ++ V +L ACS +G V++G + F M + I+P EHYAC+VD+L R G + +A
Sbjct: 598 A--DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
Y I+ MP+ P ++WGALL CR++ +L A+ +F+L+P ++G +VL++N++A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
+WE+ +RK + G++K GCSWI +K R++IF A D+S+ I+A L K+R M
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
GY P T +AL D EE EK + HSEK+A+A G+I+ G IR+TKNLR+CGDCH
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 835
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S + RE+++RD+NRFH+F DG+CSC +W
Sbjct: 836 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 210/392 (53%), Gaps = 3/392 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + +TF C+ K+ S+L G+QLH LKSG VG S Y K D A
Sbjct: 191 VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 250
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDEM ER++ +WN+ I+ V G + + F+ + +G E DL T + C+D
Sbjct: 251 KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ LGR +H V++ F CN L+D Y KC ++ AK VF + D++ VS+ SM+
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + ++F EG+ P + +++VL+ CAR L+ G+ VH + +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+IFV +AL+DMY KCGS+Q+AE+ F++M ++++ WN IIGGY+ +A+ ALS F +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ T+ CVL AC+ A +KG +I + ++ G +VD+ + G
Sbjct: 491 EEK-RFSPDERTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ A+ + ++ + +S W ++ ++G
Sbjct: 549 ALLLAHMLFDDIASKDLVS-WTVMIAGYGMHG 579
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 181/366 (49%), Gaps = 12/366 (3%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++ +G + D +G MY+ G +A ++FDE+ WN ++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +I F + +G E D TF + S + G QLHGF+++SGF SV
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N LV FY K V A+ VFD + +++ +SW S++ YV N E G +F+ G+
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E I SV + CA + LGR+VH++ VKAC + L+DMY KCG + A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
F +M +R++V + ++I GYA +G A A+ FEEM E + P+ T+ VL+ C+R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE---EGISPDVYTVTAVLNCCAR 409
Query: 328 AGAVEKGMKI---FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+++G ++ L + I ++D+ + G + A + EM ++ IS
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 385 VWGALL 390
W ++
Sbjct: 466 -WNTII 470
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 13/341 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ +T + + + GK++H ++ D+FV + DMY+K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKN-----AIDAF-INLRRTGGEPDLITF 114
+A+ +F EM +++ +W N ++GG KN A+ F + L PD T
Sbjct: 448 MQEAELVFSEMRVKDIISW-----NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L AC+ S GR++HG+++R+G+ + V N LVD Y KC + LA ++FD I
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW M+ Y + + +F R+ G+E + S+L AC+ ++ G
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 235 HAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
+ C +E + + +VDM + G + A MP + W A++ G
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+A E++ + E YV + + + + V++
Sbjct: 683 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 44/373 (11%)
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D T C+ L C+D L+ G+++ F+ +GF + ++ + L Y C ++ A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + + + W ++ ++ + +F GVE + S V + + + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G +H +K+ VG++LV Y K + A F++M ER+++ WN+II GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G A+ LS F +M E + T+V V + C+ + + G + +S+ +K
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAV-HSIGVKACFSR 329
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMR----------------------------- 380
++D+ + G +D A + +EM R
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 381 -----PTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN----MFAATG 431
P + A+LN C Y + G+ + + ND G + +SN M+A G
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHE---WIKENDLGFDIFVSNALMDMYAKCG 446
Query: 432 RWEEADLVRKEMK 444
+EA+LV EM+
Sbjct: 447 SMQEAELVFSEMR 459
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 330/576 (57%), Gaps = 3/576 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T +F + + G+ +H++ +K+ + + DMYSK G D A +F EM
Sbjct: 147 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 206
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
+R++ ++ + I+ G A+ F + G PD+ T A LN C+ LL G+
Sbjct: 207 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 266
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++ + ++ V N L+D Y KC + A++VF + K+ +SW +++ Y +N
Sbjct: 267 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 326
Query: 192 EEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+F L + P + ++ VL ACA ++ + GR +H ++ + V
Sbjct: 327 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 386
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++LVDMY KCG++ A + F+ + ++LV W +I GY G A++ F +M E
Sbjct: 387 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
A + ++ V +L ACS +G V++G + F M + I+P EHYAC+VD+L R G + +A
Sbjct: 447 A--DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 504
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
Y I+ MP+ P ++WGALL CR++ +L A+ +F+L+P ++G +VL++N++A
Sbjct: 505 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 564
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
+WE+ +RK + G++K GCSWI +K R++IF A D+S+ I+A L K+R M
Sbjct: 565 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 624
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
GY P T +AL D EE EK + HSEK+A+A G+I+ G IR+TKNLR+CGDCH
Sbjct: 625 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 684
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S + RE+++RD+NRFH+F DG+CSC +W
Sbjct: 685 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 210/392 (53%), Gaps = 3/392 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + +TF C+ K+ S+L G+QLH LKSG VG S Y K D A
Sbjct: 40 VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 99
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDEM ER++ +WN+ I+ V G + + F+ + +G E DL T + C+D
Sbjct: 100 KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 159
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ LGR +H V++ F CN L+D Y KC ++ AK VF + D++ VS+ SM+
Sbjct: 160 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 219
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + ++F EG+ P + +++VL+ CAR L+ G+ VH + +
Sbjct: 220 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 279
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+IFV +AL+DMY KCGS+Q+AE+ F++M ++++ WN IIGGY+ +A+ ALS F +
Sbjct: 280 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 339
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ T+ CVL AC+ A +KG +I + ++ G +VD+ + G
Sbjct: 340 EEK-RFSPDERTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCG 397
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ A+ + ++ + +S W ++ ++G
Sbjct: 398 ALLLAHMLFDDIASKDLVS-WTVMIAGYGMHG 428
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 12/327 (3%)
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FDE+ WN ++ G +I F + +G E D TF + S +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G QLHGF+++SGF SV N LV FY K V A+ VFD + +++ +SW S++ Y
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
V N E G +F+ G+E I SV + CA + LGR+VH++ VKAC
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ L+DMY KCG + A+ F +M +R++V + ++I GYA +G A A+ FEEM
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE- 239
Query: 308 RCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT---LKYGIKPGAEHYACVVDLLGR 363
E + P+ T+ VL+ C+R +++G ++ + L + I ++D+ +
Sbjct: 240 --EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAK 293
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALL 390
G + A + EM ++ IS W ++
Sbjct: 294 CGSMQEAELVFSEMRVKDIIS-WNTII 319
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 13/341 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ +T + + + GK++H ++ D+FV + DMY+K G
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKN-----AIDAF-INLRRTGGEPDLITF 114
+A+ +F EM +++ +W N ++GG KN A+ F + L PD T
Sbjct: 297 MQEAELVFSEMRVKDIISW-----NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 351
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L AC+ S GR++HG+++R+G+ + V N LVD Y KC + LA ++FD I
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW M+ Y + + +F R+ G+E + S+L AC+ ++ G
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 471
Query: 235 HAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
+ C +E + + +VDM + G + A MP + W A++ G
Sbjct: 472 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 531
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+A E++ + E YV + + + + V++
Sbjct: 532 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 572
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 319/559 (57%), Gaps = 6/559 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +++G D F+ SK D A ++F N+ + A I V G
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
AI + + PD + L AC L+ GR++H ++ GF N V
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177
Query: 152 LVDFYGKCNEVGLAKVVFD----GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
+++ YGKC E+G A+ VF+ ++ K+ V W +M+ +V+N E + F + E
Sbjct: 178 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN 237
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V P +F I VLSAC+++ LE+GR VH+ K +E N+FVG+AL++MY +CGSI +A+
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 297
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M +R+++ +N +I G + G + A+ F M R P VT V VL+ACS
Sbjct: 298 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLR--PTNVTFVGVLNACSH 355
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V+ G +IF+SM Y ++P EHY C+VDLLGR G ++ AY++I+ M M P + G
Sbjct: 356 GGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 415
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL+AC+++ ELG A L DSG +VLLS+++A++G+W+EA VR +MK+ G
Sbjct: 416 TLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 475
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K GCS I V N IH F D H + I L +L ++ GY P+ L D+E
Sbjct: 476 MQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 535
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+ EK + HSE++A+ +GLI+ P IR+ KNLR+C DCHSA K I+ I R+++VR
Sbjct: 536 DGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVR 595
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F +G CSC DYW
Sbjct: 596 DRNRFHYFENGACSCGDYW 614
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P+++ + KA + G+++H+ ALK G + V ++Y K G
Sbjct: 128 MLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGE 187
Query: 61 KDDADKMFDEMPE----RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
DA ++F+EMPE ++ W A I V A++AF ++ P+ T
Sbjct: 188 LGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVC 247
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L+ACS L++GR +H ++ + + N+ V N L++ Y +C + A+ VFD + D++
Sbjct: 248 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 307
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-H 235
+++ +M+ N + ++F + P + VL+AC+ ++ G + H
Sbjct: 308 VITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFH 367
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++A VE I +VD+ G+ G +++A
Sbjct: 368 SMARDYRVEPQIEHYGCMVDLLGRVGRLEEA 398
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 326/597 (54%), Gaps = 16/597 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ I PN+FTF KA L+ G Q+H LK G V VG S DMYSK G
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG--GEPDLITFCAFL 118
++A+K+F + +R+L +WNA I+ V G A+D F ++ PD T + L
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
ACS ++ G+Q+HGFLVRSGF + ++ LVD Y KC + A+ FD I +K
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S+++ Y Q E +F + + F +SS++ A A L G+ + A
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 337
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+AVK V +++VDMY KCG + +AE F +M ++++ W +I GY G
Sbjct: 338 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
++ F EM +R P+ V + VLSACS +G +++G ++F + +GIKP EHYAC
Sbjct: 398 SVRIFYEM--LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVDLLGRAG + A +I MP++P + +W LL+ CRV+G ELG+ L ++D +
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
N+V++SN++ G W E R+ G+KK AG SW+ ++ +H F++ + SH
Sbjct: 516 PANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLT 575
Query: 477 TEIQAMLT----KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA-- 530
IQ L +LREE+ GY+ L+D+++E K + HSEK+A+ L
Sbjct: 576 PVIQETLKEAERRLREEL---GYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 632
Query: 531 -IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IR+ KNLR+C DCH K +S I +VRD RFH F DG CSC DYW
Sbjct: 633 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 212/433 (48%), Gaps = 22/433 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G Q+H LKSG ++ DMY K A K+FD MPERN+ +W+A +S VL
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G K ++ F + R G P+ TF L AC + L+ G Q+HGF ++ GF+ V V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N LVD Y KC + A+ VF I+D++ +SW +M+ +V F + +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 209 E--PKDFMISSVLSACARIAGLELGRSVHAVAVKA---CVEGNIFVGSALVDMYGKCGSI 263
+ P +F ++S+L AC+ + G+ +H V++ C GS LVD+Y KCG +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYL 263
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A AF+++ E+ ++ W+++I GYA +G A+ F+ + + + + L ++
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFALSSIIG 321
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRP 381
+ + +G ++ L + G E VVD+ + GLVD A + EM ++
Sbjct: 322 VFADFALLRQGKQM---QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKL-----DPNDSGNHVLLSNMFAATGRWEEA 436
IS W ++ YGK LG+ + +++ +P++ +LS + E
Sbjct: 379 VIS-WTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 437 DLVRKEMKDVGIK 449
+L K ++ GIK
Sbjct: 435 ELFSKLLETHGIK 447
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 146/280 (52%), Gaps = 4/280 (1%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L C+ L G Q+H +L++SG N+ N L+D Y KC E +A VFD +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++N VSW +++ +V N + + +F R+G+ P +F S+ L AC + LE G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H +K E + VG++LVDMY KCG I +AE F ++ +R+L+ WNA+I G+ H G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PG 350
+ AL +F M + P+ TL +L ACS G + G +I + ++ G
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI-HGFLVRSGFHCPSS 246
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
A +VDL + G + A + ++ + IS W +L+
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS-WSSLI 285
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 320/578 (55%), Gaps = 33/578 (5%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N++ A++ + G+Q H A+K+G +V + MY + D+A K
Sbjct: 112 NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKYS 171
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ E+ A + I C L C+ +
Sbjct: 172 KKHGEKCRAMGSCVI-------------------------------CRVLGHCASTKEVV 200
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LG Q+H ++ + NV V + LVD YGKC+ A VF+ + +KN VSW +++ Y
Sbjct: 201 LGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYT 260
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
QN E+ Q+FL EGV P +F + L++CA +A L+ G ++ A +K G +
Sbjct: 261 QNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLP 320
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
V +AL++MY K GS++DA F MP R++V WN+II GYAH G A A+ +F +M +
Sbjct: 321 VCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDM--LF 378
Query: 309 CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
E VP+YVT + VLSAC++ G V++G M + G+KPG EHY C+V LL R G +D
Sbjct: 379 AEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLD 438
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFA 428
A I+ + + W +LL++C+VY LG A+ +F+L P D G +VLLSNM+A
Sbjct: 439 EAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYA 498
Query: 429 ATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLRE 488
RW+ VR+ M+++G++K G SWI V + +H+F ++D H +I L +L +
Sbjct: 499 KANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELID 558
Query: 489 EMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGD 548
++K GY+P+ AL+DVE+E+K + +HSEK+ALAFGLI P G IRI KN+RIC D
Sbjct: 559 KIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDD 618
Query: 549 CHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CH A K IS GR ++VRD RFH DG CSC DYW
Sbjct: 619 CHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 55/432 (12%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +HA +++ + DV + +Y K G A ++FD MP RN + N +S
Sbjct: 35 GKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYAS 93
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + DA LR + + + A + +GRQ HG+ +++G + V
Sbjct: 94 SGRHR---DALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYV 150
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
C+ ++ Y +C + A V Y + + E+ C+ +
Sbjct: 151 CSAVLHMYCQCAHMDEA-------------------VKYSKKHGEK--CRAMGSC----- 184
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+I VL CA + LG VH A+K +E N++VGSALVDMYGKC +A
Sbjct: 185 -----VICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANR 239
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSF--EEMTSMRCEAVPNYVTLVCVLSACS 326
F +PE+N+V W AI+ Y + AL F EM +R PN T L++C+
Sbjct: 240 VFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVR----PNEFTYAVALNSCA 295
Query: 327 RAGAVEKGMKIFYSMTLK---YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
++ G + T+K +G+ P ++++ ++G V+ A + MP R +
Sbjct: 296 GLATLKNG-NALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCRDVV 351
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD----LV 439
S W +++ +G+ A ++ L + ++V + +A + D +
Sbjct: 352 S-WNSIIIGYAHHGRAREAMEAFHDM--LFAEEVPSYVTFIGVLSACAQLGLVDEGFYYL 408
Query: 440 RKEMKDVGIKKG 451
MK+VG+K G
Sbjct: 409 NIMMKEVGVKPG 420
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN+FT+ + + L G L A +K+G + V + +MYSK+G
Sbjct: 275 MEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGS 334
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F MP R++ +WN+ I GR + A++AF ++ P +TF L+A
Sbjct: 335 VEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 394
Query: 121 CSDCSLLQLG 130
C+ L+ G
Sbjct: 395 CAQLGLVDEG 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 46/277 (16%)
Query: 127 LQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+ +H +VR+ FD V N L+ Y KC +GLA+ VFD + +N VS ++
Sbjct: 32 LSLGKAVHARVVRAARFD--VVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + + A ++++SS ++A A + ++GR H A+KA +
Sbjct: 90 GYASSGRHRDALALLRVA---DFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ +V SA++ MY +C + +A K E
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKYSKKHGE------------------------------ 176
Query: 306 SMRCEAVPNYVTLVC-VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+C A+ + V +C VL C+ V G ++ ++ LK ++ + +VD+ G+
Sbjct: 177 --KCRAMGSCV--ICRVLGHCASTKEVVLGSQV-HTQALKRRLELNVYVGSALVDMYGKC 231
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
A + + +P + +S W A++ A Y + EL
Sbjct: 232 DFPHEANRVFEVLPEKNIVS-WTAIMTA---YTQNEL 264
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 330/591 (55%), Gaps = 36/591 (6%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
K +HA L++ DVF AF + S T L A ++ ++ NL +NA I
Sbjct: 34 KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCS 93
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+N+ +I R G PD IT + AC+ +G Q HG ++ GF+ +
Sbjct: 94 TSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFY 153
Query: 148 VCNGLVDFYG-------------------------------KCNEVGLAKVVFDGIIDKN 176
V N LV Y +C + A+ +FD + ++N
Sbjct: 154 VQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERN 213
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
V+W +M+ Y +N E + F + EGV + ++ V+S+CA + L +G H
Sbjct: 214 LVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHE 273
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
++ + N+ +G+A+VDMY +CG+++ A + F ++PE++++CW A+I G A G+A+
Sbjct: 274 YVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEK 333
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F EM + VP +T VL+ACS AG VE+G++IF SM +G++P EHY C
Sbjct: 334 ALWYFSEMA--KKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGC 391
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG + +A + + +MP++P +W ALL ACR++ E+G L ++ P
Sbjct: 392 MVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEY 451
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
SG++VLLSN++A +W++ ++R+ MKD G++K G S I + ++H F D +H
Sbjct: 452 SGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEI 511
Query: 477 TEIQAMLTK-LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+I+ + + ++K AGY+ +T ++D++EEEK + HSEK+A+A+G++ I
Sbjct: 512 EKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPT 571
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCH+A K IS + E+IVRD NRFH F +G CSC DYW
Sbjct: 572 PIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 33/344 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS----------- 56
P++ T P L KA + L G Q H A+K G D +V S MY+
Sbjct: 115 PDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSV 174
Query: 57 --------------------KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
+ G A ++FD MPERNL TW+ IS + A+
Sbjct: 175 FQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAV 234
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F L+ G + +++C+ L +G + H +++R+ N+ + +VD Y
Sbjct: 235 ETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMY 294
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
+C V A +VF+ + +K+ + W +++ + E F ++G P+D +
Sbjct: 295 ARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFT 354
Query: 217 SVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+VL+AC+ +E G + ++ VE + +VD+ G+ G ++ AE KMP
Sbjct: 355 AVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPV 414
Query: 276 R-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
+ N W A++G + ++ + + M+ E +YV L
Sbjct: 415 KPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLL 458
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++ E + N+ + + + L G++ H +++ ++ +G + DMY++ G
Sbjct: 240 LQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGN 299
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+++PE+++ W A I+ + G + A+ F + + G P ITF A L A
Sbjct: 300 VEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTA 359
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
CS +++ G ++ + R G + + +VD G+ ++ A K V + N
Sbjct: 360 CSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAP 419
Query: 179 SWCSML 184
W ++L
Sbjct: 420 IWRALL 425
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/526 (39%), Positives = 311/526 (59%), Gaps = 11/526 (2%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A FD MP ++ A+WN I+ G + A + F ++ E + +++ A ++
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGY 196
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF-DGIIDKNDVSW 180
+C L+ G V ++ Y K +V LA+ +F D ++KN V+W
Sbjct: 197 IECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ YV+N E+G ++F EG+ P +SS L C+ ++ L+LGR +H + K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++ ++L+ MY KCG + DA F M ++++V WNA+I GYA G+AD AL
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + P+++T V VL AC+ AG V GM F SM Y ++P +HY C+VDL
Sbjct: 373 FREMIDNKIR--PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG ++ A ++I+ MP RP +V+G LL ACRV+ EL AA+ L +L+ ++ +
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
V L+N++A+ RWE+ VRK MK+ + K G SWI ++N++H F++ D H I
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L ++MK AGY P+ FAL++VEEE+K + HSEK+A+AFG I +P G I++
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLRICGDCH A KFIS I RE+IVRD RFH F DG CSC DYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 36/287 (12%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + +D K+F M E + ++ +S+A+LG
Sbjct: 259 YVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG------------------------- 293
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
CS+ S LQLGRQ+H + +S +V+ L+ Y KC E+G A +F+ +
Sbjct: 294 ------CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ V+W +M+ Y Q+ + +F + P +VL AC + +G +
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 235 HAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQG 292
V+ VE + +VD+ G+ G +++A MP R + + ++G
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ ++A + E++ + + YV L + ++ +R V K MK
Sbjct: 468 NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMK 514
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 61/139 (43%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN S L G+Q+H + KS +DV S MY K G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+F+ M ++++ WNA IS G A+ F + PD ITF A L A
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Query: 121 CSDCSLLQLGRQLHGFLVR 139
C+ L+ +G +VR
Sbjct: 395 CNHAGLVNIGMAYFESMVR 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 40/276 (14%)
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R+ G PD I + ++ L R +L + + N ++ + ++
Sbjct: 21 RSIGNPDTILVESCSSSSCSSPEPSLVRS--DYLTKPSDQDQIFPLNKIIARCVRSGDID 78
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFLTARREGVEPKDFMISSVLSAC 222
A VF G+ KN ++W S+L+ ++ Q+F E EP F + +LS
Sbjct: 79 GALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF----DEIPEPDTFSYNIMLSCY 134
Query: 223 ARIAGLELGRS----------------VHAVAVK-----------ACVEGNIFVGSALVD 255
R E +S + A + + +E N +A++
Sbjct: 135 VRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMIS 194
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
Y +CG ++ A F P R +V W A+I GY ++A + F++MT + N
Sbjct: 195 GYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK-----NL 249
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
VT ++S E G+K+F +M L+ GI+P +
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNS 284
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E + F + ++ Y + + + A+ F++MP ++ WN +I GYA +G + A F
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M N V+ ++S G +EK F ++ G + ++ +
Sbjct: 181 MME------KNEVSWNAMISGYIECGDLEKASHFFKVAPVR-----GVVAWTAMITGYMK 229
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPNDSG 418
A V+ A + K+M + + W A+++ +PE G + + + PN SG
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 318/561 (56%), Gaps = 21/561 (3%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLK---DDADKMFDEMPERNLATWNAYISNA 86
KQ+ A +K+ ++ V + + K + A ++FD++ + N+ +N
Sbjct: 43 KQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGY 102
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
P I F RR L S L G+QLH F V+ G N+
Sbjct: 103 ARLNDPLRMITHF---RRC------------LRLVSKVKALAEGKQLHCFAVKLGVSDNM 147
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V L++ Y C ++ ++ VFD I + V++ ++++ +N +F +
Sbjct: 148 YVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEI 207
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G++P D + VLS+CA + L+LGR +H K + + V + L+DMY KCGS+ DA
Sbjct: 208 GLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDA 267
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F MP+R+ W+AII YA G A+S EM + + P+ +T + +L ACS
Sbjct: 268 VNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQ--PDEITFLGILYACS 325
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G VE+G + F+ MT +YGI P +HY C+VDLLGRAG +D AY+ I E+P++PT +W
Sbjct: 326 HNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILW 385
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
LL+AC +G E+G+ + +F+LD + G++V+ SN+ A G+W++ + +RK M D
Sbjct: 386 RTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDK 445
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-D 505
G K GCS I V N +H F A + H +T + L +L +E+K+AGY+PDT+ Y D
Sbjct: 446 GAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYAD 505
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
+E+EEK + +HSEK+A+ FGL+ PPG IR+ KNLR+CGDCH+A KFIS I GR++I
Sbjct: 506 MEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQII 565
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD RFH F DG CSC DYW
Sbjct: 566 LRDVQRFHHFKDGKCSCGDYW 586
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 6/325 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GKQLH A+K G +++V + +MY+ G D + ++FD++ E + +NA I +
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
R A+ F L+ G +P +T L++C+ L LGR +H ++ + GFD V V
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
L+D Y KC + A VF + ++ +W +++V Y + + M ++E V
Sbjct: 251 NTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310
Query: 209 EPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+P + +L AC+ +E G H + + + +I +VD+ G+ G + +A
Sbjct: 311 QPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAY 370
Query: 268 IAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
+++P + + W ++ + G+ +M E + + +YV + C+
Sbjct: 371 KFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFS---NLCA 427
Query: 327 RAGAVEKGMKIFYSMTLKYGIK-PG 350
R G + + +M K +K PG
Sbjct: 428 RYGKWDDVNHLRKTMIDKGAVKIPG 452
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P D T + + + L G+ +H K G V V + DMY+K G DDA
Sbjct: 209 LKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAV 268
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F +MP+R+ W+A I G AI +++ +PD ITF L ACS
Sbjct: 269 NVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNG 328
Query: 126 LLQLGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G + HG G ++ +VD G+ + A D + I + W ++
Sbjct: 329 LVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTL 388
Query: 184 L 184
L
Sbjct: 389 L 389
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/618 (34%), Positives = 339/618 (54%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + + T+ A + L GKQLHA +++ D +V + ++Y+K G
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A +F+ + +RN W I+ + G +++ F +R D ++
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
C L LGRQLH ++SG V V N L+ Y KC+
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGV 208
+ A+ FDG+ KN ++W +ML Y+Q+ EE+G +M+ + + V
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA + +LG + VK + + V +A++ MY KCG I +A
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + +++V WNA+I GY+ G A+ F+++ ++ A P+Y++ V VLS CS +
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDI--LKRGAKPDYISYVAVLSGCSHS 618
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F M + I PG EH++C+VDLLGRAG + A ++I EMPM+PT VWGA
Sbjct: 619 GLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGA 678
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+++G EL +AA ++F+LD DSG+++L++ ++A G+ +++ +RK M+D GI
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V N++H+F+A D SH + I+ L +L E++ GY V
Sbjct: 739 KKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGY----------VRT 788
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
+ +E+ HHSEK+A+AFGL+++P +PI I KNLRICGDCH+ K IS + GRE ++RD
Sbjct: 789 DSPRSEI-HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRD 847
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 848 AVRFHHFNGGSCSCGDYW 865
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQ---------IHDVFVGCSAFDM--- 54
SPN FTF K+ AL QL + K G + D+FV C D+
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASR 194
Query: 55 -------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNA 95
Y KT D A ++FD MPER++ +WN +S GR + A
Sbjct: 195 LFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF 155
+D ++++ G D T+ + L AC+ S L+ G+QLH ++R+ + V + LV+
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVEL 314
Query: 156 YGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
Y KC AK VF+ + D+N+V+W ++ ++Q+ ++F R E + F +
Sbjct: 315 YAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFAL 374
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
++++S C L LGR +H++ +K+ + V ++L+ MY KC ++Q AE F M E
Sbjct: 375 ATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNE 434
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+++V W ++I ++ G+ A F+ M++ N +T +L A + GA E G+
Sbjct: 435 KDIVSWTSMITAHSQVGNIAKAREFFDGMST------KNVITWNAMLGAYIQHGAEEDGL 488
Query: 336 KIFYSMTLKYGIKP 349
+++ M + ++P
Sbjct: 489 RMYNVMLSEKDVRP 502
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 178/408 (43%), Gaps = 44/408 (10%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLIT 113
Y K G DA ++F MP R++A+WN +S + ++++F+++ R+G P+ T
Sbjct: 81 YVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFT 140
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F + +C L QL G + + G + V LVD + +C V LA +F I
Sbjct: 141 FAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIK 200
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS----------------- 216
+ SMLV YV+ Y ++ ++F + V + M+S
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 217 --------------SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
S L+ACAR++ L G+ +HA ++ + +V SALV++Y KCG
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A+ FN + +RN V W +I G+ G S E MR E + + L +
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLIAGFLQHG---CFTESVELFNQMRAELMTLDQFALATL 377
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S C + G ++ +S+ LK G ++ + + + A I + M +
Sbjct: 378 ISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKD 436
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+S W +++ A ++G IA F D + N + + M A
Sbjct: 437 IVS-WTSMITA-----HSQVGNIAKAREF-FDGMSTKNVITWNAMLGA 477
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 11/241 (4%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L+A C L R+L L+ NV N +++ Y K + A +F + +
Sbjct: 44 TLLHAYLSCGALPDARRL---LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPAR 100
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSV 234
+ SW +++ Y Q+ + + F++ R G P F + + +C + L +
Sbjct: 101 DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQL 160
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ K + + V +ALVDM+ +CG++ A F ++ E + C N+++ GY
Sbjct: 161 LGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGV 220
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D AL F+ M + V+ ++SA S++G V + + + M K G++ + Y
Sbjct: 221 DHALELFDSMPE------RDVVSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTY 273
Query: 355 A 355
Sbjct: 274 T 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +++ Y K G + DA F +MP R++ WN ++ GY + L+S E
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYF---QSQQYLASLESFV 126
Query: 306 SMR--CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
SM ++ PN T + +C G +++ M K+G + ++ A +VD+ R
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLL-GMVQKFGSQDDSDVAAALVDMFVR 185
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALL-NACRVYGKPELGRIAADNLFKLDPN-DSGNHV 421
G VD A + + PTI ++L + YG A LF P D +
Sbjct: 186 CGTVDLASRLFVRIK-EPTIFCRNSMLVGYVKTYGVDH-----ALELFDSMPERDVVSWN 239
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIK 449
++ + + +GR EA + +M+ G++
Sbjct: 240 MMVSALSQSGRVREALDMVVDMQSKGVR 267
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 325/558 (58%), Gaps = 42/558 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E N+++F A + L G Q+HAL KS + DV++G + DMYSK G+
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + FD M RN+ +WN+ I+ G A++ F+ + G EPD IT + ++A
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSA 261
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--------- 170
C+ S ++ G Q+H +V R + ++ + N LVD Y KC V A++VFD
Sbjct: 262 CASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVS 321
Query: 171 ----------------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+++KN VSW +++ Y QN E E ++FL +RE +
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVK------ACVEGNIFVGSALVDMYGKCGS 262
P + ++L+ACA +A L+LGR H +K + E +IFVG++L+DMY KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGM 441
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
++D + F +M ER++V WNA+I GYA G+ AL F +M + P++VT++ VL
Sbjct: 442 VEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKM--LVSGQKPDHVTMIGVL 499
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SACS AG VE+G + F+SM + G+ P +H+ C+VDLLGRAG +D A ++I+ MPM+P
Sbjct: 500 SACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPD 559
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
VWG+LL AC+V+G ELG+ A+ L ++DP +SG +VLLSNM+A GRW++ VRK+
Sbjct: 560 NVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQ 619
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
M+ G+ K GCSWI +++R+H+F KD H +I +L L E+MK AGY+P+ +
Sbjct: 620 MRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADDD 679
Query: 503 LYDVEEEEKMTEVGHHSE 520
++ EEE +E+ H E
Sbjct: 680 --EICEEESDSELVLHFE 695
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 204/433 (47%), Gaps = 73/433 (16%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS-- 84
+ +++HA +K+ ++F+ D Y K G +DA K+FD MP+RN ++NA +S
Sbjct: 36 IDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVL 95
Query: 85 ------------------------NAVLGG-----RPKNAIDAFINLRRTGGEPDLITFC 115
NA++ G R + A+ F+++ + +F
Sbjct: 96 TKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFG 155
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
+ L+AC+ + L +G Q+H + +S + +V + + LVD Y KC V A+ FDG+ +
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VSW S++ Y QN ++F+ GVEP + ++SV+SACA + + G +H
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIH 275
Query: 236 AVAVKA-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-------------------- 274
A VK ++ +G+ALVDMY KC + +A + F++MP
Sbjct: 276 ARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASV 335
Query: 275 -----------ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
E+N+V WNA+I GY G + A+ F + R P + T +L+
Sbjct: 336 KAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLF--LLLKRESIWPTHYTFGNLLN 393
Query: 324 ACSRAGAVEKGMKIFYSMTLKYG--IKPGAEHYACV----VDLLGRAGLVDRAYEIIKEM 377
AC+ ++ G + ++ LK+G + G E V +D+ + G+V+ + + M
Sbjct: 394 ACANLADLKLGRQA-HTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM 452
Query: 378 PMRPTISVWGALL 390
R +S W A++
Sbjct: 453 VERDVVS-WNAMI 464
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 139/306 (45%), Gaps = 33/306 (10%)
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D F L++C R++H ++++ F + + N LVD YGKC A+ VF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 170 DGIIDKNDVS-------------------------------WCSMLVVYVQNYEEENGCQ 198
D + +N S W +M+ + Q+ E +
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
F+ E ++ S LSACA + L +G +HA+ K+ ++++GSALVDMY
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG + A+ AF+ M RN+V WN++I Y G A AL F M E P+ +TL
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVE--PDEITL 255
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V+SAC+ A+ +G++I + + + +VD+ + V+ A + MP
Sbjct: 256 ASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 379 MRPTIS 384
+R +S
Sbjct: 316 LRNVVS 321
>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 701
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/580 (36%), Positives = 334/580 (57%), Gaps = 8/580 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L +A L K+++ + +G + ++ M+ K G+ DA ++FDEM
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYMMNRILLMHVKCGMIIDARRLFDEM 184
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PERNL ++N+ IS V G + A + F + + + TF L A + + +G+
Sbjct: 185 PERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDCETHTFAVMLRASAGLWSVYVGK 244
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY-VQN 190
QLH ++ G N V GL+D Y KC ++ A+ F+ + +K V+W +++ Y +
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALHG 304
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
Y EE C ++ R GV F +S ++ R+A LEL + HA +++ E I
Sbjct: 305 YSEEALCLLY-EMRDSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVAN 363
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ALVD Y K G + A F+K+P +N++ WNA++GGYA+ G A+ FE M + +
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAK-- 421
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
PN+VT + VLSAC+ +G E+G +IF SM+ +GIKP A HYAC+++LLGR GL+D A
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
I+ P++ T+++W ALLNACR+ G ELGR+ A+ L+ + P GN+V+L NM+ +
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQGNLELGRVVAEKLYGMGPEKLGNYVVLYNMYNSM 541
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT----EIQAMLTKL 486
G+ EA V + ++ G+ C+W+ V ++ H F + D N E+ + +L
Sbjct: 542 GKTAEAAGVLETLESKGLSMIPACTWVEVGDQTHSFLSGDRFDSYNETVKREVYQKVDEL 601
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
EE+ GY+ + L DV+E+E+ +HSEK+A+A+GL+ P P++IT+N RIC
Sbjct: 602 MEEIYEYGYLAEEKNLLPDVDEKEEERVGRYHSEKLAIAYGLMNTPEWNPLQITQNHRIC 661
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH +FIS + GRE++VRD +RFH F +G CSC YW
Sbjct: 662 KDCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + FT + + S+ L KQ HA ++SG ++ + D YSK G
Sbjct: 316 MRDSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVANTALVDFYSKWGR 375
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++P +N+ +WNA + GR +A+ F + P+ +TF A L+A
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSA 435
Query: 121 CSDCSLLQLGRQLHGFLVRS---GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C+ L + G ++ FL S G +++ G+ DG++D+
Sbjct: 436 CAYSGLSEQGWEI--FLSMSEVHGIKPRAMHYACMIELLGR-----------DGLLDEA- 481
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+ ++ RR ++ M +++L+AC LELGR V
Sbjct: 482 -------IAFI---------------RRAPLKTTVNMWAALLNACRMQGNLELGR---VV 516
Query: 238 AVKACVEGNIFVGSALV--DMYGKCGSIQDAEIAFNKMPERNL 278
A K G +G+ +V +MY G +A + + L
Sbjct: 517 AEKLYGMGPEKLGNYVVLYNMYNSMGKTAEAAGVLETLESKGL 559
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 324/607 (53%), Gaps = 33/607 (5%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDE 70
F+FP L KA S + G ++H LA K G + D F+ MY+ DA +FD+
Sbjct: 122 FSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDK 181
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
M + WN I G +A+ F ++R + +PD + C L+AC L G
Sbjct: 182 MCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG 241
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI------------------ 172
R +H F+ +G+ + + L++ Y C + LA+ ++DG+
Sbjct: 242 RTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL 301
Query: 173 -------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
I+++ V W +M+ Y ++ + + ++F ++ P + SV+
Sbjct: 302 GMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVI 361
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLV 279
SAC+ + L +H ++ + V +AL+DMY KCG++ A F MP +N++
Sbjct: 362 SACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVI 421
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFY 339
W+++I +A G+AD A+ F M + E PN VT + VL AC AG VE+G K+F
Sbjct: 422 SWSSMINAFAMHGNADSAIKLFRRMKEVNIE--PNGVTFIGVLYACGHAGLVEEGEKLFS 479
Query: 340 SMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
SM ++GI P EHY C+VDL RA + +A E+I+ MP P + +WG+L++AC+V+G+
Sbjct: 480 SMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA 539
Query: 400 ELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISV 459
ELG AA L +L+P+ G V+LSN++A RW + L+RK M GI K S I +
Sbjct: 540 ELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEI 599
Query: 460 KNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHS 519
N++H+F D H+++ EI L ++ ++K GY P T+ L D+EEE+K V HS
Sbjct: 600 NNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHS 659
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+ +GLI+ IRI KNLRIC DCHS K +S + E++VRD RFH G
Sbjct: 660 EKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGI 719
Query: 580 CSCSDYW 586
CSC DYW
Sbjct: 720 CSCRDYW 726
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 179/387 (46%), Gaps = 46/387 (11%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCS 125
+F ++P + N + + P+ I + NLR D +F + L A S S
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
G ++HG + GF + + GL+ Y C + A+++FD + + V+W ++
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN ++ ++F R ++P ++ +VLSAC L GR++H
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 246 NIFVGSALVDMYGKCGS-------------------------------IQDAEIAFNKMP 274
+ + +AL++MY CG+ ++DA F++M
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG 334
ER+LVCW+A+I GYA AL F+EM R +VP+ +T++ V+SACS GA+ +
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKR--SVPDQITMLSVISACSHVGALAQA 373
Query: 335 MKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACR 394
I ++ + G ++D+ + G + +A E+ + MP + IS W +++NA
Sbjct: 374 NWI-HTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVIS-WSSMINAFA 431
Query: 395 VYGKPELGRIAADNLFK------LDPN 415
++G + +A LF+ ++PN
Sbjct: 432 MHGNAD----SAIKLFRRMKEVNIEPN 454
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T + A S + +H +SG + V + DMY+K G A ++
Sbjct: 352 PDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREV 411
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ MP +N+ +W++ I+ + G +AI F ++ EP+ +TF L AC L+
Sbjct: 412 FENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLV 471
Query: 128 QLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSMLV 185
+ G +L ++ G +VD Y + N + A + + + N + W S++
Sbjct: 472 EEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMS 531
Query: 186 VYVQNYEEENGCQMFLTARREGVEP 210
+ E E G F R +EP
Sbjct: 532 ACQVHGEAELG--EFAAKRLLELEP 554
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/611 (35%), Positives = 322/611 (52%), Gaps = 43/611 (7%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKM 67
T CL + S + KQ+HA LK+G + D + + F + + D A +
Sbjct: 17 TMSCLQRCSKQEEL----KQIHARMLKTGLMQDSY-AITKFLSFCISSTSSDFLPYAQIV 71
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD + WN I P+ ++ + + + + TF + L ACS+ S
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI--------------- 172
+ Q+H + + G++ +V N L++ Y LA ++FD I
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 173 ----------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
+KN +SW +M+ YVQ + Q+F + VEP + ++
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+ LSACA++ LE G+ +H+ K + + +G L+DMY KCG +++A F + ++
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++ W A+I GYA+ GH A+S F EM M + PN +T VL+ACS G VE+G
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIK--PNVITFTAVLTACSYTGLVEEGKL 369
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
IFYSM Y +KP EHY C+VDLLGRAGL+D A I+EMP++P +WGALL ACR++
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 397 GKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSW 456
ELG + L +DP G +V +N+ A +W++A R+ MK+ G+ K GCS
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 457 ISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD-VEEEEKMTEV 515
IS++ H F A D SH +IQ+ +R +++ GY+P+ L D V+++E+ V
Sbjct: 490 ISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIV 549
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+ +GLI PG IRI KNLR+C DCH K IS I R++++RD RFH F
Sbjct: 550 HQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHF 609
Query: 576 WDGYCSCSDYW 586
DG CSC DYW
Sbjct: 610 RDGKCSCGDYW 620
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 33/310 (10%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N +TFP L KA S L Q+HA K G +DV+ S + Y+ TG A +F
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 69 DEMPERNLATWNAYISNAVLGGR-------------------------------PKNAID 97
D +PE + +WN+ I V G+ K A+
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 233
Query: 98 AFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG 157
F ++ + EPD ++ L+AC+ L+ G+ +H +L ++ + + L+D Y
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC E+ A VF I K+ +W +++ Y + F+ ++ G++P ++
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 218 VLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
VL+AC+ +E G+ + +++ ++ I +VD+ G+ G + +A+ +MP +
Sbjct: 354 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Query: 277 -NLVCWNAII 285
N V W A++
Sbjct: 414 PNAVIWGALL 423
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P++ + A + L GK +H+ K+ D +GC DMY+K G
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++F + ++++ W A IS G + AI F+ +++ G +P++ITF A L A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G+ + + R + +VD G+ + AK + + N V
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 179 SWCSML 184
W ++L
Sbjct: 418 IWGALL 423
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/532 (37%), Positives = 309/532 (58%), Gaps = 1/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G +A K+FDEMP+R L TWNA I+ + + + F + G PD T
Sbjct: 33 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 92
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ + + + +G+Q+HG+ ++ G + ++ V + L Y + ++ ++V +
Sbjct: 93 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 152
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N V+W ++++ QN E ++ + G P +VLS+C+ +A G+ +
Sbjct: 153 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 212
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA A+K + V S+L+ MY KCG + DA AF++ + + V W+++I Y G
Sbjct: 213 HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQG 272
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D A+ F M + N V + +L ACS +G +KG+++F M KYG KPG +HY
Sbjct: 273 DEAIELFNTMAEQTNMEI-NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 331
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
CVVDLLGRAG +D+A II+ MP++ I +W LL+AC ++ E+ + + ++DP
Sbjct: 332 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 391
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
NDS +VLL+N+ A+ RW + VRK M+D +KK AG SW K +H F+ D S
Sbjct: 392 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 451
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
++ EI + L +L EMK GY PDT L+D++EEEK +++ HSEK+A+AF L+ +P G
Sbjct: 452 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 511
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCH AFK+IS I RE+ +RD +RFH F +G CSC DYW
Sbjct: 512 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 159/339 (46%), Gaps = 12/339 (3%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SP+++T +F S+ L G+Q+H +K G D+ V S MY + G D +
Sbjct: 86 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ MP RNL WN I G P+ + + ++ +G P+ ITF L++CSD ++
Sbjct: 146 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 205
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G+Q+H ++ G V+V + L+ Y KC +G A F D+++V W SM+
Sbjct: 206 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 265
Query: 187 YVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACA----RIAGLELGRSVHAVAVKA 241
Y + + + ++F T A + +E + ++L AC+ + GLEL + K
Sbjct: 266 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL---FDMMVEKY 322
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + +VD+ G+ G + AE MP + ++V W ++ +A+MA
Sbjct: 323 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 382
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
F+E+ + YV L V ++ R V K M+
Sbjct: 383 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 421
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N N L++ Y + ++ A+ VFD + D+ +W +M+ +Q E G +F
Sbjct: 22 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 81
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P ++ + SV S A + + +G+ +H +K +E ++ V S+L MY + G +Q
Sbjct: 82 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 141
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D EI MP RNLV WN +I G A G + L ++ M C PN +T V VLS+
Sbjct: 142 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR--PNKITFVTVLSS 199
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G +I ++ +K G + ++ + + G + A + E +
Sbjct: 200 CSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV- 257
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
+W ++++A +G+ + I N N N V N+ A
Sbjct: 258 MWSSMISAYGFHGQGDEA-IELFNTMAEQTNMEINEVAFLNLLYA 301
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 327/571 (57%), Gaps = 19/571 (3%)
Query: 31 QLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDAD-----KMFDEMPERNLATW-NAYI 83
QLHA A+KSG Q H FV + + G A ++FD +P W N +
Sbjct: 49 QLHAAAVKSGLQAHPAFV-TRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLL 107
Query: 84 S-----NAVLGGRP--KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+A G RP + A F+ + G PD TF + L AC+ + GRQ HG
Sbjct: 108 RGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGV 167
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENG 196
V+ G + V L++ Y +C + A+ +F + + VS+ +M+ V++
Sbjct: 168 AVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEA 227
Query: 197 CQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDM 256
+F + +G++ + SVLSACA + LELGR +H K ++ + V +AL+DM
Sbjct: 228 LVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDM 287
Query: 257 YGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
YGKCGS++DA F M R+ W+ +I YA+ + A+S FEEM + P+ V
Sbjct: 288 YGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIK--PDDV 345
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T + VL ACS +G V +G++ F SM ++G+ PG +HY CV DLL R+G +DRAYE I E
Sbjct: 346 TFLGVLYACSHSGLVSEGLQYFDSMR-EFGLVPGIKHYGCVADLLARSGQLDRAYEFIDE 404
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
+P++PT +W LL+AC G +LG+ + + +LD + G++V+ SN+ A TGRWEE
Sbjct: 405 LPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEM 464
Query: 437 DLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYI 496
+ VRK M + G+ K GCS I V NR+H F A D H ++ + + M+ + E++K AGY+
Sbjct: 465 NRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYV 524
Query: 497 PDTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKF 555
P+T+ + ++ EEEK + +HSEK+A++FGL+ PG +R+ KNLR+C DCHS K
Sbjct: 525 PNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKL 584
Query: 556 ISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+S + R +I+RD NRFH F DG CSC DYW
Sbjct: 585 VSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 13/356 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ++P+ +TF L KA +A G+Q H +A+K G +V + +MY++ G
Sbjct: 133 MLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGD 192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A MF + + ++NA I+ AV RP A+ F ++ G + +T + L+A
Sbjct: 193 ARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSA 252
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LGR +H ++ + D V V L+D YGKC + A VF G+ ++ +W
Sbjct: 253 CALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAW 312
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA----GLELGRSVHA 236
M+V Y + +F +++G++P D VL AC+ GL+ S+
Sbjct: 313 SVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMRE 372
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ V G G + D+ + G + A +++P + + W ++ +G AD
Sbjct: 373 FGL---VPGIKHYG-CVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDAD 428
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK-PG 350
+ FE + + +YV + C+ G E+ ++ M K +K PG
Sbjct: 429 LGKQVFERILELDDSHGGDYVIFS---NLCANTGRWEEMNRVRKLMNEKGVVKVPG 481
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/532 (37%), Positives = 309/532 (58%), Gaps = 1/532 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G +A K+FDEMP+R L TWNA I+ + + + F + G PD T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ + + + +G+Q+HG+ ++ G + ++ V + L Y + ++ ++V +
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 154
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+N V+W ++++ QN E ++ + G P +VLS+C+ +A G+ +
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 214
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
HA A+K + V S+L+ MY KCG + DA AF++ + + V W+++I Y G
Sbjct: 215 HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQG 274
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D A+ F M + N V + +L ACS +G +KG+++F M KYG KPG +HY
Sbjct: 275 DEAIELFNTMAEQTNMEI-NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
CVVDLLGRAG +D+A II+ MP++ I +W LL+AC ++ E+ + + ++DP
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 393
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
NDS +VLL+N+ A+ RW + VRK M+D +KK AG SW K +H F+ D S
Sbjct: 394 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 453
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
++ EI + L +L EMK GY PDT L+D++EEEK +++ HSEK+A+AF L+ +P G
Sbjct: 454 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 513
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRI KNLR+C DCH AFK+IS I RE+ +RD +RFH F +G CSC DYW
Sbjct: 514 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 159/339 (46%), Gaps = 12/339 (3%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
SP+++T +F S+ L G+Q+H +K G D+ V S MY + G D +
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+ MP RNL WN I G P+ + + ++ +G P+ ITF L++CSD ++
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G+Q+H ++ G V+V + L+ Y KC +G A F D+++V W SM+
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 187 YVQNYEEENGCQMFLT-ARREGVEPKDFMISSVLSACA----RIAGLELGRSVHAVAVKA 241
Y + + + ++F T A + +E + ++L AC+ + GLEL + K
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL---FDMMVEKY 324
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSS 300
+ + + +VD+ G+ G + AE MP + ++V W ++ +A+MA
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
F+E+ + YV L V ++ R V K M+
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N N L++ Y + ++ A+ VFD + D+ +W +M+ +Q E G +F
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P ++ + SV S A + + +G+ +H +K +E ++ V S+L MY + G +Q
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
D EI MP RNLV WN +I G A G + L ++ M C PN +T V VLS+
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR--PNKITFVTVLSS 201
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
CS +G +I ++ +K G + ++ + + G + A + E +
Sbjct: 202 CSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV- 259
Query: 385 VWGALLNACRVYGK 398
+W ++++A +G+
Sbjct: 260 MWSSMISAYGFHGQ 273
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 329/594 (55%), Gaps = 20/594 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+D+T + A A H GKQ+H +K G +G S +Y+K+G + +
Sbjct: 177 PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRA 236
Query: 68 FDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +P++N+ TW IS A + ++ F+++ + P+ T + ++ C
Sbjct: 237 FKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLD 296
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
+ LG+Q+ GF + G N+ V N + Y + E A +F+ + D + ++W +M+
Sbjct: 297 MNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISG 356
Query: 187 YVQNYEEE-----------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ Q + ++F R ++P F SS+LS C+ + LE G +H
Sbjct: 357 FAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIH 416
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K ++ V SALV+MY KCG I+ A AF +MP R LV W ++I GY+ G
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPH 476
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ FE+M + A PN +T V +LSACS AG VE+ M+ F M +Y I+P +HY
Sbjct: 477 DAIQLFEDM--ILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYG 534
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C++D+ R G +D AY IK P ++W +L+ CR +G EL AAD L +L P
Sbjct: 535 CMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPK 594
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMK--DVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
+VLL NM+ +TGRW + VRK K D+GI + SWI+++++++ F+A D SH
Sbjct: 595 VVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDR--SWITIRDKVYFFKADDRSH 652
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT--EVGHHSEKIALAFGLIAI 531
++TE+ +L L E+ KA GY P N LYD EE+ K + HHSE++A+A GL+
Sbjct: 653 PQSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKA 712
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PPGV +RITKN+ +C DCHS+ KF S + RE++VRD+ R H+F DG CSC D+
Sbjct: 713 PPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 200/403 (49%), Gaps = 29/403 (7%)
Query: 21 SALHIPV------TG-----KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
SA+++P+ TG K LH +K+G I D+FV S ++Y + G DA +FD
Sbjct: 78 SAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFD 137
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
EMPE+N+ TW A I+ L +P A++ F+ + + G P T L+AC + L
Sbjct: 138 EMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDL 197
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV- 188
G+Q+HG+ ++ G S+ N L Y K + F I DKN ++W +M+
Sbjct: 198 GKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAE 257
Query: 189 -QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+NY E G +FL + V P +F ++SV+S C + LG+ V K N+
Sbjct: 258 DENYTEL-GLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNL 316
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADM 296
V ++ + +Y + G ++A F +M + +++ WNA+I G+A +
Sbjct: 317 PVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQ 376
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F ++ +R P+ T +LS CS A+E+G +I ++ T+K G +
Sbjct: 377 ALKIFRDL--VRSAMKPDLFTFSSILSVCSTMMALEQGEQI-HAQTIKTGFLSDVVVNSA 433
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
+V++ + G ++ A + EMP R T+ W ++++ +G+P
Sbjct: 434 LVNMYNKCGCIEYATKAFVEMPTR-TLVTWTSMISGYSQHGRP 475
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R + P+ FTF + S + G+Q+HA +K+G + DV V + +MY+K G +
Sbjct: 386 RSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A K F EMP R L TW + IS GRP +AI F ++ G +P+ ITF + L+ACS
Sbjct: 446 YATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACS 505
Query: 123 DCSLLQ 128
L++
Sbjct: 506 YAGLVE 511
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+EG + M +L C L +++H VK +IFV ++LV++Y +CG+ Q
Sbjct: 71 KEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQ 130
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
DA F++MPE+N+V W A+I GY +AL F EM ++ P+ TL +LSA
Sbjct: 131 DARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEM--LKLGRYPSDYTLGGMLSA 188
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
C + ++ G ++ + T+KYG + L ++G ++ K +P + I+
Sbjct: 189 CVASHNIDLGKQV-HGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVIT 247
Query: 385 VWGALLNAC 393
W +++AC
Sbjct: 248 -WTTMISAC 255
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/608 (37%), Positives = 328/608 (53%), Gaps = 57/608 (9%)
Query: 29 GKQLHALALKSG--QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE--RNLATWNAYIS 84
G++LHA + +G + F+ + Y+ G A K+FDE+P ++ W +
Sbjct: 32 GERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMG 91
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
V A+ F+ +RR G +PD +T C+ + +G Q HG +V+ G G
Sbjct: 92 CFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGG 151
Query: 145 NVSVCNGLVDFYGKCNEVGLAK-------------------------------VVFDGII 173
CN ++D Y K +G A+ VVFD +
Sbjct: 152 VEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMP 211
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV-----EPKDFMISSVLSACARIAGL 228
++N+V+W M+ Y+ + Q RE + E + S+L+AC++ L
Sbjct: 212 ERNEVAWTIMIAGYL----DSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDL 267
Query: 229 ELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+GR VHA A+K E NI VG+A+VDMY KCG I A F KMP+RN+V WNA++ G
Sbjct: 268 MMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSG 327
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
A G AL F +M EA P+ VT VLSACS +G V++G F ++ YGI
Sbjct: 328 LAMHGLGRAALDIFPQMFK---EAKPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGI 384
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P EHYAC+VDLLGRAG ++ A +++EMP+RP V G+LL +C ++GK +LG
Sbjct: 385 TPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQ 444
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
L +LDP ++ H+LLSNM+A G+ A+ +R+ +K GIKK G S I V ++H F
Sbjct: 445 ELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFS 504
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD---------VEEEEKMTEVGHH 518
A D SH R E+ ML ++ ++ AGY P+T + VE+EEK + H
Sbjct: 505 AGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQEEKEQALFSH 564
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+A+ FGLI+ PGVP+ I KNLRIC DCHSA K +S I RE+++RD NRFH F +G
Sbjct: 565 SEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEG 624
Query: 579 YCSCSDYW 586
CSC DYW
Sbjct: 625 SCSCCDYW 632
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 159/363 (43%), Gaps = 56/363 (15%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSA-FDMYSKTG 59
MRR + P++ T CLF + L V G Q H +K G + V C+A DMY+K+G
Sbjct: 109 MRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMG-LGGVEKACNAVMDMYAKSG 167
Query: 60 LKDDADK-------------------------------MFDEMPERNLATWNAYISNAVL 88
L +A + +FDEMPERN W I+ +
Sbjct: 168 LMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLD 227
Query: 89 GGRPKNAI----DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FD 143
G + + + +L E + +T C+ L ACS L +GR +H + +++ +
Sbjct: 228 SGLTQESFALVREMIFDLEM---ELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKE 284
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
N+ V +VD Y KC + +A F + +N VSW +ML + +F
Sbjct: 285 LNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQM 344
Query: 204 RREGVEPKDFMISSVLSACARIAGLELG-------RSVHAVAVKACVEGNIFVGSALVDM 256
+E +P D +SVLSAC+ ++ G SV+ + K VE + +VD+
Sbjct: 345 FKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPK--VEHY----ACMVDL 397
Query: 257 YGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
G+ G +++AEI +MP R N V +++G + G + +E+ + + +
Sbjct: 398 LGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYH 457
Query: 316 VTL 318
+ L
Sbjct: 458 ILL 460
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEG--NIFVGSALVDMYGKCGSIQDAEIAFNKMP- 274
+L +CAR + L++G +HA + + G F+ +AL+ Y CG A F+++P
Sbjct: 19 LLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPH 78
Query: 275 -ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++ V W ++G + +D AL F EM RC P+ VTLVC+ C+R G V
Sbjct: 79 SHKDTVDWTTLMGCFVRHNVSDEALLIFVEMR--RCGVKPDEVTLVCLFGGCARLGDVVV 136
Query: 334 GMKIFYSMTLKYGIKPGAEHYAC--VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G + M +K G+ G AC V+D+ ++GL+ A + EM + +S W +L+
Sbjct: 137 GAQGHGCM-VKMGL--GGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVS-WTVILD 192
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
GR+ D + + N+ ++++ + E LVR+ + D+
Sbjct: 193 GVIRSEGVRNGRVVFDEM--PERNEVAWTIMIAGYLDSGLTQESFALVREMIFDL 245
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/566 (39%), Positives = 319/566 (56%), Gaps = 11/566 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVL 88
KQLH A+ G V + YSK GL +A +F M R+ +WN+ I
Sbjct: 158 KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQ 217
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A+ + + G + D+ T + LNA + L GRQ HG L+++GF N V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 149 CNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE-ENGCQMFLTAR 204
+GL+DFY KC + + ++ VF I+ + V W +M+ Y N E E + F +
Sbjct: 278 GSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQ 337
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSI 263
R G P D V SAC+ ++ G+ +H +A+K+ + N I V +AL+ +Y K G++
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNL 397
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
DA F++MPE N V +N +I GYA GH AL ++ M + PN +T V +LS
Sbjct: 398 LDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRM--LDSGIAPNNITFVAILS 455
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AC+ G V++G K F +M + I+P AEHY+C++DLLGRAG ++ A I MP +P
Sbjct: 456 ACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS 515
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
W ALL ACR + L AA L + P + +V+L+NM+A G+WEE VRK M
Sbjct: 516 VAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSM 575
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
+ I+K GCSWI VK + H+F A+D SH E+ L ++ ++MK GY+ D +A+
Sbjct: 576 RGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAM 635
Query: 504 YDVEEEEKMT---EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
+E + +GHHSEK+A+AFGL++ G I + KNLRICGDCH+A KF+S +
Sbjct: 636 VKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVA 695
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
GRE+IVRDN RFH F DG CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 218/500 (43%), Gaps = 80/500 (16%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------------ 59
+F L S A TGK LHAL +KS ++ ++YSK G
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 60 ---------------LKDD----ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFI 100
KD A ++FDE P+ + ++N IS A+ F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
+R G E D T + AC C + L +QLH F V GFD SV N V +Y K
Sbjct: 130 RMRELGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 161 EVGLAKVVFDGIID-KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVL 219
+ A VF G+ +++VSW SM+V Y Q+ E ++ +G + F ++SVL
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG---SIQDAEIAFNKMPER 276
+A + L GR H +KA N VGS L+D Y KCG + D+E F ++
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 277 NLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+LV WN +I GY+ ++ H++ A+ SF +M R P+ + VCV SACS + +G
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQ--RIGHRPDDCSFVCVTSACSNLSSPSQGK 365
Query: 336 KIFYSMTLKYGI----------------KPG----------------AEHYACVVDLLGR 363
+I + + +K I K G A + C++ +
Sbjct: 366 QI-HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQ 424
Query: 364 AGLVDRAYEIIKEM---PMRPTISVWGALLNACRVYGKPELGRIAADNL---FKLDPNDS 417
G A + + M + P + A+L+AC GK + G+ + + FK++P ++
Sbjct: 425 HGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEP-EA 483
Query: 418 GNHVLLSNMFAATGRWEEAD 437
++ + ++ G+ EEA+
Sbjct: 484 EHYSCMIDLLGRAGKLEEAE 503
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 158/317 (49%), Gaps = 11/317 (3%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD---DADKM 67
FT + A ++L + G+Q H +K+G + VG D YSK G +D D++K+
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKV 300
Query: 68 FDEMPERNLATWNAYISNAVLG-GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F E+ +L WN IS + + A+ +F ++R G PD +F +ACS+ S
Sbjct: 301 FQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 127 LQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
G+Q+HG ++S N +SV N L+ Y K + A+ VFD + + N VS+ M+
Sbjct: 361 PSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIK 420
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVE 244
Y Q+ +++ G+ P + ++LSACA ++ G+ + + +E
Sbjct: 421 GYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIE 480
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS--SF 301
S ++D+ G+ G +++AE + MP + V W A++G A + H +MAL+ +
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG--ACRKHKNMALAERAA 538
Query: 302 EEMTSMRCEAVPNYVTL 318
+E+ M+ A YV L
Sbjct: 539 KELMVMQPLAATPYVML 555
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
M+R P+D +F C+ A S L P GKQ+H LA+KS + + V + +Y K+G
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSG 395
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA ++FD MPE N ++N I G A+ + + +G P+ ITF A L+
Sbjct: 396 NLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILS 455
Query: 120 ACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-ND 177
AC+ C + G++ + + + + ++D G+ ++ A+ D + K
Sbjct: 456 ACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS 515
Query: 178 VSWCSML 184
V+W ++L
Sbjct: 516 VAWAALL 522
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 332/570 (58%), Gaps = 18/570 (3%)
Query: 31 QLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDAD-----KMFDEMPERNLATWNAY 82
QLHA+A+K+G Q H FV + ++ G + A ++FD +P W
Sbjct: 46 QLHAVAVKAGGGLQAHPAFV-TRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNT 104
Query: 83 I-----SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+ GG + A F+ + G PD TF + L AC+ + GRQ HG
Sbjct: 105 LLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVA 164
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
V++G + V L++ Y +C +V A+V+FD + + VS+ +M+ V++
Sbjct: 165 VKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEAL 224
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F + +G++P + SVLSACA + LELGR +H K ++ + V +AL+DMY
Sbjct: 225 VLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMY 284
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KCGS++DA F M R+ W+ ++ YA+ G+ A+S FEEM + P+ VT
Sbjct: 285 AKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK--PDDVT 342
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ VL ACS +G V +G++ F SM +YGI G +HY CV DLL R+G ++RAY+ I E+
Sbjct: 343 FLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P++PT +W LL+AC +G ++G+ + + +LD + G++V+ SN+ A TGRWEE +
Sbjct: 402 PIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMN 461
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
+VRK M + G+ K GCS I + N +H F A D SH + E + M+ ++ E++K GY+P
Sbjct: 462 MVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Query: 498 DTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
+T+ + ++ EEEK T + +HSEK+A++FGL+ PG +RI KNLR+C DCHS K +
Sbjct: 522 NTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLV 581
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S + R +I+RD NRFH F DG CSC DYW
Sbjct: 582 SMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ++P+ +TF L KA ++ G+Q H +A+K+G +V + +MY++ G
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A MFD M + ++NA I+ +V P A+ F ++ G +P +T + L+A
Sbjct: 189 VRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSA 248
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LGR +H ++ + D V V L+D Y KC + A VF + ++ +W
Sbjct: 249 CALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAW 308
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+V Y + MF +++G++P D VL AC+ + G +
Sbjct: 309 SVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE 368
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ I + D+ + G ++ A +++P + + W ++ A G DM
Sbjct: 369 YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKR 428
Query: 300 SFEEMTSM 307
FE + +
Sbjct: 429 VFERILEL 436
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 317/530 (59%), Gaps = 9/530 (1%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA + FDE+P+ N A S V ++++ F + + + A + +
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 123 DCSLLQLG--RQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDV 178
+ G LH + + GF+ N V N ++D Y K ++ +A+ VFD ++++ V
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDVV 120
Query: 179 SWCSMLVVYVQN--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
SW SM+ +Y QN E G + G++ +S+VL ACA ++ G+ +H
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
V+ +E N++VG+++VDMY KCG ++ A AF K+ E+N++ W+A+I GY G
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F EM R PNY+T + VL+ACS AG +++G + +M ++GI+ G EHY C
Sbjct: 241 ALEIFTEMK--RSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 298
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG +D AY +IKEM ++P ++WGALL+ACR++ EL ++ LF+LD ++
Sbjct: 299 MVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN 358
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
SG +VLLSN++A G W++ + +R +K I+K G S +K +I++F D SH ++
Sbjct: 359 SGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQH 418
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI + L KL E M+ AGY+P+T L+D++EEEK + + HSEK+A+AF L+ P
Sbjct: 419 IEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSV 478
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I I KNLR+C DCH+A KFI+ I RE+I+RD RFH F DG CSC DYW
Sbjct: 479 IHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 9/327 (2%)
Query: 15 CLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDE 70
L S++ +P G LHAL K G + V + D Y+K G +D A K+FD
Sbjct: 55 ALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDT 114
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQ 128
M ER++ +WN+ I+ G AI + + GG + + + A L AC+ +Q
Sbjct: 115 M-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQ 173
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+ +H +VR G + NV V +VD Y KC V +A F I +KN +SW +M+ Y
Sbjct: 174 TGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 233
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNI 247
+ + ++F +R G+ P SVL+AC+ L+ GR +A+ + +E +
Sbjct: 234 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 293
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+VD+ G+ G + +A +M + + W A++ + ++A S + +
Sbjct: 294 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 353
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ YV L + + VE+
Sbjct: 354 LDASNSGYYVLLSNIYAEAGMWKDVER 380
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/483 (40%), Positives = 297/483 (61%), Gaps = 4/483 (0%)
Query: 106 GGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA 165
G E + +T+ L+ + L+ GR++H + +G + +V V LV+ YGKC V A
Sbjct: 5 GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEA 64
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACA 223
+ F+ I N VSW +ML Y QN +++ + + R+G+ P ++L AC+
Sbjct: 65 RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ L GR +HA + + ++ V +ALV+ YG+CGS+ DA+I F+ M R+++ W++
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I +A +G D A+ + M S +P+ + + VL ACS +G VE F S+
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSE--GTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG 242
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
++P EHYAC+VD+LGRAG + A ++++ MP P ++ +L+AC++Y E G
Sbjct: 243 DTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGE 302
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AA+ +F+LDP +S ++ L+N+++A R ++A +RK M++ GIKK GCSWI V +R+
Sbjct: 303 AAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRV 362
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H F A D H + EI A + +L +MK AGY DT L DVEE+EK + +HSEK+A
Sbjct: 363 HEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLA 422
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+AFGLI+ PPG P+RI KNLR+C DCH+A K IS + GRE++VRD NRFH F DG CSC+
Sbjct: 423 IAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCN 482
Query: 584 DYW 586
DYW
Sbjct: 483 DYW 485
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 16/357 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+++H+ +G DV VG + +MY K ++A F+++ N+ +W+A ++
Sbjct: 29 GRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQ 88
Query: 89 GGRPKNAIDAFINL--RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + A++ + + R G P+ +TF L+ACS L GR++H + GFD ++
Sbjct: 89 NGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDL 148
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VCN LV+FYG+C +G AK+VFDG+ ++ +SW SM+ + Q + +++ E
Sbjct: 149 VVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSE 208
Query: 207 GVEPKDFMISSVLSACARIAGLEL-GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G P D + SVL AC+ +E G ++ VE + + +VD+ G+ G ++D
Sbjct: 209 GTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRD 268
Query: 266 AEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
AE MP + + ++ + ++ E + + E Y+TL + SA
Sbjct: 269 AEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSA 328
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
R + K+ +K KPG ++DR +E I M P
Sbjct: 329 AKRPKDAARIRKLMEERGIKK--KPGCSWIE----------VLDRVHEFIAGDKMHP 373
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
R+ ++PN TF L A S L G+++HA + G D+ V + + Y + G
Sbjct: 106 RKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLG 165
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA +FD M R++ +W++ IS GR A++ + + G PD I F + L ACS
Sbjct: 166 DAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACS 225
Query: 123 DCSLLQ 128
+ +++
Sbjct: 226 NSGVVE 231
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/619 (37%), Positives = 338/619 (54%), Gaps = 75/619 (12%)
Query: 31 QLHALALKSGQIHDVFVG------CSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
Q+HA+ +KSGQI D C+ D++ + D A K+F++MP+RN +WN I
Sbjct: 34 QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIR 91
Query: 85 NAVLGGRPKNAI----------DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
K I D FI EP+ TF + L AC+ +Q G+Q+H
Sbjct: 92 GFSESDEDKALIAITLFCEMMSDEFI-------EPNRFTFPSVLKACAKTGKIQQGKQIH 144
Query: 135 GFLVRSGF---------------------------------------------DGNVSVC 149
G ++ GF DG V +
Sbjct: 145 GLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLW 204
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR-EGV 208
N ++D Y + + A+++FD + ++ VSW +M+ Y QN ++ ++F ++ E +
Sbjct: 205 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDI 264
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + SVL A +R+ LELG +H A + + + +GSAL+DMY KCG I+ A +
Sbjct: 265 RPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIM 324
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
F ++P N++ W+A+I G+A G A A+ F MR V P+ V + +L+ACS
Sbjct: 325 VFERLPRENVITWSAMINGFAIHGQAGDAIDCF---CKMRQAGVRPSDVAYINLLTACSH 381
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AG VE+G + F M G++P EHY C+VDLLGR GL+D A E I MP++P +W
Sbjct: 382 AGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWK 441
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALL ACR++ E+G+ A+ L + P+DSG +V LSNM+A+ G W E +R MK++
Sbjct: 442 ALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMD 501
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
I+K GCSWI + +H F +D SH R EI +ML ++ ++++ AGY P T L ++E
Sbjct: 502 IRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 561
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
EE+K + +HSEK+A AFGLI+ PG PIRI KNLRIC DCHS+ K IS + R++ VR
Sbjct: 562 EEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 621
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D RFH F DG CSC DYW
Sbjct: 622 DRKRFHHFQDGSCSCMDYW 640
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 58/350 (16%)
Query: 101 NLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
L GG + +N C L Q+H ++SG + ++ F +
Sbjct: 6 TLYSPGGNSPASSLFPQINTCRTIRDLS---QIHAVFIKSGQIRDTLAAAEILRFCATSD 62
Query: 161 ----EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL---TARREGVEPKDF 213
++ A +F+ + +N SW +++ + ++ E++ + L E +EP F
Sbjct: 63 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRF 122
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD-------- 265
SVL ACA+ ++ G+ +H +A+K G+ FV S LV MY CG ++D
Sbjct: 123 TFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKN 182
Query: 266 -------------------------------------AEIAFNKMPERNLVCWNAIIGGY 288
A + F+KM +R++V WN +I GY
Sbjct: 183 IIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 242
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
+ G A+ F EM + PNYVTLV VL A SR G++E G + + GI+
Sbjct: 243 SQNGFFKDAVEVFREMKKGE-DIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIR 300
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+ ++D+ + G++++A + + +P R + W A++N ++G+
Sbjct: 301 IDDVLGSALIDMYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIHGQ 349
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 150/337 (44%), Gaps = 52/337 (15%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I PN FTFP + KA + GKQ+H LALK G D FV + MY GL
Sbjct: 112 MSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGL 171
Query: 61 KDDA-----------------DK----------------------------MFDEMPERN 75
DA D+ +FD+M +R+
Sbjct: 172 MKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 231
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSLLQLGRQ 132
+ +WN IS G K+A++ F +++ GE P+ +T + L A S L+LG
Sbjct: 232 VVSWNTMISGYSQNGFFKDAVEVFREMKK--GEDIRPNYVTLVSVLPAVSRLGSLELGEW 289
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LH + SG + + + L+D Y KC + A +VF+ + +N ++W +M+ + + +
Sbjct: 290 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQ 349
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGS 251
+ F R+ GV P D ++L+AC+ +E GR + V +E I
Sbjct: 350 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYG 409
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+VD+ G+ G + +AE MP + + V W A++G
Sbjct: 410 CMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGA 446
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 325/584 (55%), Gaps = 3/584 (0%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
++ I PN++ + + + V GKQ H ALKSG +V + +YSK
Sbjct: 117 KDNIFPNEYVIATAISSCDS-QMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVG 175
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
A ++ +P ++ +N ++ + A+D + G E + T+ C+
Sbjct: 176 AAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCA 235
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ LG+Q+H +++S D +V + + ++D YGKC V + FD + +N VSW S
Sbjct: 236 SLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTS 295
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
++ Y QN E +F + + P ++ ++ + ++ A ++ L LG +HA A K+
Sbjct: 296 IIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSG 355
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++GN+ VG+AL+ MY K G I A+ F+ M N++ WNAII G++H G ALS F+
Sbjct: 356 LKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQ 415
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
+M M PNYVT + V+ AC+ V++G F + ++ I PG EHY C+V LL
Sbjct: 416 DM--MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLS 473
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R+G +D A ++ + + W LLNAC V+ + GR A+ L +L+P D G ++L
Sbjct: 474 RSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYIL 533
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSNM A RW+ +RK M++ +KK G SW+ ++N H+F ++D H I
Sbjct: 534 LSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYEN 593
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
+ L +++ GY+PD + L+D+E+E+K+ + +HSEK+A+A+GL+ P G PI + KN
Sbjct: 594 VKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKN 653
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCH+A K IS + R ++VRD NRFH F +G CSC DYW
Sbjct: 654 LRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 183/375 (48%), Gaps = 13/375 (3%)
Query: 29 GKQLHA-LALKSGQIHDVFVGC--SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
G+ +HA L + + D V S ++Y K A K+FD MP RN+ +W+A ++
Sbjct: 38 GRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAG 97
Query: 86 AVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
+ G P + F + + P+ +++C D + G+Q HG+ ++SG +
Sbjct: 98 YMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGKQCHGYALKSGLEF 156
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV--YVQNYEEENGCQMFLT 202
+ V N L+ Y KC++VG A + + ND+ +C LVV +Q+ +
Sbjct: 157 HQYVKNALIQLYSKCSDVGAAIQIL-YTVPGNDI-FCYNLVVNGLLQHTHMAEAVDVLKL 214
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
EG+E + ++ CA + + LG+ VHA +K+ ++ ++++GS+++DMYGKCG+
Sbjct: 215 IISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGN 274
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ F+++ RN+V W +II Y + AL+ F +M + C PN T+ +
Sbjct: 275 VLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM-EIDC-IPPNEYTMAVLF 332
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
++ + A+ G ++ ++ K G+K ++ + ++G + A + M
Sbjct: 333 NSAAGLSALCLGDQL-HARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNI 391
Query: 383 ISVWGALLNACRVYG 397
I+ W A++ +G
Sbjct: 392 IT-WNAIITGHSHHG 405
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGF---DGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
L +D L+ GR +H L + D V+ N L++ Y KC+EV +A+ +FD +
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGR 232
+N VSW +++ Y+QN ++F ++ + P +++I++ +S+C +E G+
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
H A+K+ +E + +V +AL+ +Y KC + A +P ++ C+N ++ G
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
H A+ + + S E N T V + C+ + G ++ M LK I
Sbjct: 204 HMAEAVDVLKLIISEGIEW--NNATYVTIFRLCASLKDITLGKQVHAQM-LKSDIDCDVY 260
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ ++D+ G+ G V + R +S W +++ A
Sbjct: 261 IGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVS-WTSIIAA 299
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +CI PN++T LF +++ L G QLHA A KSG +V VG + MY K+G
Sbjct: 316 MEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGD 375
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +F M N+ TWNA I+ G K A+ F ++ TG P+ +TF + A
Sbjct: 376 ILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILA 435
Query: 121 CSDCSLLQLG-----RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
C+ L+ G + F + G + + GL+ G+ +E + I+
Sbjct: 436 CAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIV-GLLSRSGRLDEA--ENFMRSHQINW 492
Query: 176 NDVSWCSML-VVYV-QNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
+ VSW ++L YV ++Y++ +L +EP+D +LS
Sbjct: 493 DVVSWRTLLNACYVHKHYDKGRKIAEYLLQ----LEPRDVGTYILLS 535
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/648 (33%), Positives = 340/648 (52%), Gaps = 71/648 (10%)
Query: 6 ISPNDFTFPCLFK--ASSALHIPVTGKQLHAL---------------------------- 35
+ P+ FTF LFK A H+ + G+ LHA
Sbjct: 99 VPPDAFTFHFLFKCCARGGAHV-LLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPG 157
Query: 36 ----ALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
A + DV + +K GL DDA ++ P RN+ TW IS GR
Sbjct: 158 DARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGR 217
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
A+D F ++ G PD +T L+AC L G LH + + +
Sbjct: 218 AAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVA 277
Query: 152 LVDFYGKCNEVGLAKVVFDGI--------------------------------IDKNDVS 179
L+D Y KC + G A+ VFD + D + ++
Sbjct: 278 LIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVIT 337
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S++ Y+ +F RR G+ +F + +L+A A + L GR++HA
Sbjct: 338 FNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIE 397
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ VE ++++G+AL+DMY KCG +++A +AF +M R++ W+A+IGG A G M +
Sbjct: 398 QRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNG---MGKA 454
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ E M+C+ N VT + VL+ACS + +++G F M L + I+P EHY C++
Sbjct: 455 ALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMI 514
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGR+GL+D A ++++ MPM+P +W ++L+ACRV+ +L + AA +L KL+P +
Sbjct: 515 DLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDA 574
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+V + N++ + +WE+A +R+ M+ G+KK AG S I+V ++H F D SH + E
Sbjct: 575 VYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAE 634
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I M+ ++ +K+AGY P T+ DV+EEEK + HSEK+A+AFGL+++ P +P+
Sbjct: 635 IVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVH 694
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+C DCHSA K IS + RE+IVRD +RFH F G CSC+D+W
Sbjct: 695 IIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 175/452 (38%), Gaps = 80/452 (17%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD--------KMFDEMPERNLATWNAY 82
+LHAL SG++ + +A + S T +D +FD MP A
Sbjct: 17 ELHALVTTSGRL--LHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFLFDTAL 74
Query: 83 ISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVRSG 141
+ P I + + PD TF C+ + + LGR LH R+
Sbjct: 75 RACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTL 134
Query: 142 FDGNVS-VCNGLVDFYGKCNEVGLAKVVFD--------------------GIID------ 174
V + + ++ Y + G A+ FD G++D
Sbjct: 135 LPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLL 194
Query: 175 -----KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
+N V+W ++ Y + F + +G+ P + + +LSAC ++ L
Sbjct: 195 ARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLN 254
Query: 230 LGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGG 287
G S+H V K + + V AL+DMY KCG A F+ + R WNA+I G
Sbjct: 255 FGCSLHMLVGDKRMLMSDKLV-VALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDG 313
Query: 288 YAHQGHADMALSSFEEM----------------------------TSMRCEAV-PNYVTL 318
Y GH D+A S F++M T MR + + T+
Sbjct: 314 YCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTM 373
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V +L+A + GA+ +G + ++ + ++ ++D+ + G V+ A K+M
Sbjct: 374 VGLLTASASLGALPQG-RALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMS 432
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+R + W A++ G +G+ A ++ F
Sbjct: 433 VR-DVHTWSAMIGGLAFNG---MGKAALEHFF 460
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + ++FT L AS++L G+ LHA + DV++G + DMY K G
Sbjct: 361 MRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGR 420
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A F +M R++ TW+A I G K A++ F ++ G + +T+ A L A
Sbjct: 421 VEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTA 480
Query: 121 CSDCSLLQLGR 131
CS LL GR
Sbjct: 481 CSHSCLLDEGR 491
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 327/616 (53%), Gaps = 41/616 (6%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ F+F + KA S + G +LH +A K + D FV DMY+ G + A +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
DEM R++ TWN I G A F ++ + PD + C ++AC ++
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 129 LGRQLHGFLV---------------------------RSGFDG----NVSVCNGLVDFYG 157
R ++ FL+ R F N+ V +V Y
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 158 KCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISS 217
KC + A+V+FD K+ V W +M+ YV++ + ++F G++P + S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
V+SACA + L+ + VH+ +E + + +AL++MY KCG + F KMP RN
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+V W+++I + G A ALS F M E PN VT V VL CS +G VE+G KI
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVE--PNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
F SMT +Y I P EHY C+VDL GRA L+ A E+I+ MP+ + +WG+L++ACR++G
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 398 KPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWI 457
+ ELG+ AA + +L+P+ G VL+SN++A RWE+ +R+ M++ + K G S I
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Query: 458 SVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGH 517
+ H F D H+++ EI A L ++ ++K AGY+PD L DVEEEEK V
Sbjct: 588 DQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLW 647
Query: 518 HSEKIALAFGLIAIPP-------GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
HSEK+AL FGL+ GV IRI KNLR+C DCH FK +S + RE+IVRD
Sbjct: 648 HSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRT 706
Query: 571 RFHRFWDGYCSCSDYW 586
RFH + +G CSC DYW
Sbjct: 707 RFHCYKNGLCSCRDYW 722
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 193/425 (45%), Gaps = 46/425 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLA-TWNAYISNAVL 88
KQLHA L++ H + + S + A +F +P + +N ++ +
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSR 88
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
P+ I + +R GG D +F L A S S L G +LHG + + V
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV 148
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
G +D Y C + A+ VFD + ++ V+W +M+ Y + + ++F + V
Sbjct: 149 ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVK--------------------ACVE---- 244
P + ++ +++SAC R + R+++ ++ C++
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE 268
Query: 245 -------GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
N+FV +A+V Y KCG + DA++ F++ +++LVCW +I Y + A
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L FEEM C + P+ V++ V+SAC+ G ++K K +S G++
Sbjct: 329 LRVFEEMC---CSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNA 384
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE-----LGRIAADNLFK 411
++++ + G +D ++ ++MP R +S W +++NA ++G+ R+ +N
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGEASDALSLFARMKQEN--- 440
Query: 412 LDPND 416
++PN+
Sbjct: 441 VEPNE 445
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ + + A + L I K +H+ +G ++ + + +MY+K G D
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++MP RN+ +W++ I+ + G +A+ F +++ EP+ +TF L CS
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 126 LLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L++ G+++ + + +VD +G+ N + A V + + + N V W S+
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 184 L 184
+
Sbjct: 520 M 520
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/583 (37%), Positives = 323/583 (55%), Gaps = 10/583 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDADK 66
PND T+ + A P + A G + DV V + + Y K G D A
Sbjct: 2 PNDVTYVAILGACGH---PWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSARG 58
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+FD + R+ A WNA IS V+ + A++ +R G P T A LNAC
Sbjct: 59 LFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRD 118
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVD-FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
G ++H F G D + V LV+ Y + + A+ +FD + +N +SW +M+
Sbjct: 119 FSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVISWTAMVG 178
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
V+ Q ++F + EGV P D ++VL+A +A + + V A + G
Sbjct: 179 VHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLG 238
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ V + L+ GKCGS+++ F MP +N V WN+ I A G+ + F+
Sbjct: 239 NVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQ--- 295
Query: 306 SMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+M+ E + VTL+ VLS+CS AG V +G F +M + YG+ AEHY+CV+DLL RA
Sbjct: 296 TMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGLPAEAEHYSCVIDLLSRA 355
Query: 365 GLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
G ++ A E +K +P ++ W LL C+++G E G A + L+P +G ++++
Sbjct: 356 GWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVM 415
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
N++A G+W EA VRK M D+G KK G SWI VK RIH F+ DTSH R++EI L
Sbjct: 416 HNLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHREL 475
Query: 484 TKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNL 543
+L ++MK AG++ DT +YD++ +EK + + HSEK+A+AFGLI+ G P+RI KNL
Sbjct: 476 ERLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNL 535
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+C DCHSA KFISG+VGRE++VRD RFH F G CSC D+W
Sbjct: 536 RVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 578
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E ++PND TF + AS L K + A ++G + +V V K G ++
Sbjct: 199 EGVTPNDVTFTAVLNASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEE 258
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
K F MP +N +WN+ I+ G ++ F ++ G + +T L++CS
Sbjct: 259 VAKFFRVMPVQNQVSWNSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSH 318
Query: 124 CSLLQLG 130
L+ G
Sbjct: 319 AGLVAQG 325
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 333/618 (53%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + T+ A + L GKQLHA ++S D +V + ++Y+K G
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F + +RN +W I + G +++ F +R D ++
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE------------------- 161
CS+ + L RQLH ++SG V + N L+ Y KC
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 162 ------------VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GV 208
+G A+ FDG+ +N ++W +ML Y+Q+ EE+G +M+ E V
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA + +LG + VK + + V +A++ MY KCG I +A
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+ + ++LV WNA+I GY+ G A+ F++M ++ A P+Y++ V VLS+CS +
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDM--LKKGAKPDYISYVAVLSSCSHS 642
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V++G F + + + PG EH++C+VDLL RAG + A +I EMPM+PT VWGA
Sbjct: 643 GLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGA 702
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+ +G EL +AA +LF LD DSG ++LL+ ++A G+ ++ VRK M+D GI
Sbjct: 703 LLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGI 762
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ VKN++H+F+A+D SH + I+ L +L E++ GY V
Sbjct: 763 KKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGY----------VRT 812
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E +E+ HHSEK+A+AFG++ +P +PI I KNLRICGDCH+ K IS + GRE ++RD
Sbjct: 813 ESLRSEI-HHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRD 871
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 872 AVRFHHFKGGSCSCGDYW 889
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 212/474 (44%), Gaps = 66/474 (13%)
Query: 1 MRRECIS-PNDFTFPCLFKASSALHIPVTGKQLHALALKSG---------QIHDVFVGCS 50
MRR S PN FTF C K+ AL QL L K G I D+FV C
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 51 AFDM----------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
A D Y+K+ D A ++F+ MPER++ +WN +S
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR + A+ +++ G D T+ + L AC+ S L G+QLH ++RS + V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ +V+ Y KC A+ VF + D+N VSW ++ ++Q ++F R E +
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELM 391
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
F +++++S C+ + L R +H++++K+ + + ++L+ MY KCG++Q+AE
Sbjct: 392 TVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAES 451
Query: 269 AFNKMPE-------------------------------RNLVCWNAIIGGYAHQGHADMA 297
F+ M E RN++ WNA++G Y G +
Sbjct: 452 IFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDG 511
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L + M + + + +P++VT V + C+ GA + G +I T+K G+ V
Sbjct: 512 LKMYSAMLTEK-DVIPDWVTYVTLFRGCADMGANKLGDQI-TGHTVKVGLILDTSVMNAV 569
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+ + + G + A +I + + +S W A++ +G + D++ K
Sbjct: 570 ITMYSKCGRISEARKIFDFLSRKDLVS-WNAMITGYSQHGMGKQAIEIFDDMLK 622
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 38/371 (10%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA+++F MP R++ +WN +S GR +A+++F+++RR+G P+ T
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFT 164
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F + +C ++ QL G L + GF G+ V G+VD + +C V A F I
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS----------------- 216
SML Y ++Y ++ ++F + V + M+S
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 217 --------------SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
S L+ACA+++ L G+ +HA +++ + +V SA+V++Y KCG
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCV 321
++A F+ + +RN V W +IGG+ G +L F + MR E + + L +
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQ---MRAELMTVDQFALATI 401
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
+S CS + ++ +S++LK G ++ + + G + A I M R
Sbjct: 402 ISGCSNRMDMCLARQL-HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERD 460
Query: 382 TISVWGALLNA 392
+S W +L A
Sbjct: 461 IVS-WTGMLTA 470
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
E N+ + +++ Y K GS+ DAE F +MP R++ WN ++ GY G L + E
Sbjct: 91 TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGR---FLDAME 147
Query: 303 EMTSMR--CEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
SMR +++PN T C + +C G E +++ +T K+G + + +VD+
Sbjct: 148 SFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLT-KFGFQGDPDVATGIVDM 206
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN-DSGN 419
R G VD A + ++ RPT+ ++L Y K G A LF+ P D +
Sbjct: 207 FVRCGAVDFASKQFSQIE-RPTVFCRNSMLAG---YAK-SYGVDHALELFESMPERDVVS 261
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
++ + + +GR EA V +M + G++
Sbjct: 262 WNMMVSALSQSGRAREALSVAVDMHNRGVR 291
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L+A C L R G L + NV N +++ Y K + A+ +F + +
Sbjct: 68 TLLHAYLSCGALPDAR---GLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRR 124
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSV 234
+ SW +++ Y Q+ + + F++ RR G P F + +C + E+ +
Sbjct: 125 DVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQL 184
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ K +G+ V + +VDM+ +CG++ A F+++ + C N+++ GYA
Sbjct: 185 LGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGV 244
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
D AL FE M V ++ +V LS RA
Sbjct: 245 DHALELFESMPE---RDVVSWNMMVSALSQSGRA 275
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 318/564 (56%), Gaps = 37/564 (6%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+ G + +F + + +L + A I+ A + G A ++ L + P+ TF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV------------ 162
+ L +CS S G+ +H +++ G + V GLVD Y K +V
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 163 -------------------GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
A+ +FD + +++ VSW M+ Y Q+ + +F
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 204 RREG-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
EG +P + + + LSAC++I LE GR +H + + N+ V + L+DMY KCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+++A + FN P +++V WNA+I GYA G++ AL F EM + P +T + L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI-TGLQPTDITFIGTL 368
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
AC+ AG V +G++IF SM +YGIKP EHY C+V LLGRAG + RAYE IK M M
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
+W ++L +C+++G LG+ A+ L L+ +SG +VLLSN++A+ G +E VR
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
MK+ GI K G S I ++N++H F+A D H ++ EI ML K+ E +K+ GY+P+TN
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTV 548
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
L D+EE EK + HSE++A+A+GLI+ PG P++I KNLR+C DCH+ K IS I GR
Sbjct: 549 LQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGR 608
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
++++RD NRFH F DG CSC D+W
Sbjct: 609 KIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 145/317 (45%), Gaps = 41/317 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I+PN+FTF L K+ S +GK +H LK G D +V D+Y+K G A
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 66 KMFDEMPERNLAT-------------------------------WNAYISNAVLGGRPKN 94
K+FD MPER+L + WN I G P +
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 95 AIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
A+ F L G +PD IT A L+ACS L+ GR +H F+ S NV VC GL+
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR-EGVEPKD 212
D Y KC + A +VF+ K+ V+W +M+ Y + ++ ++F + G++P D
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 213 FMISSVLSACARIAGL--ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA-EIA 269
L ACA AGL E R ++ + ++ I LV + G+ G ++ A E
Sbjct: 362 ITFIGTLQACAH-AGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 270 FNKMPERNLVCWNAIIG 286
N + + V W++++G
Sbjct: 421 KNMNMDADSVLWSSVLG 437
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 332/570 (58%), Gaps = 18/570 (3%)
Query: 31 QLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDAD-----KMFDEMPERNLATWNAY 82
QLHA+A+K+G Q H FV + ++ G + A ++FD +P W
Sbjct: 46 QLHAVAVKAGGGLQAHPAFV-TRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNT 104
Query: 83 I-----SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
+ GG + A F+ + G PD TF + L AC+ + GRQ HG
Sbjct: 105 LLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVA 164
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
V++G + V L++ Y +C +V A+V+FD + + VS+ +M+ V++
Sbjct: 165 VKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEAL 224
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F + +G++P + SVLSACA + LELGR +H K ++ + V +AL+DMY
Sbjct: 225 VLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMY 284
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KCGS++DA F M R+ W+ ++ YA+ G+ A+S FEEM + P+ VT
Sbjct: 285 AKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK--PDDVT 342
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ VL ACS +G V +G++ F SM +YGI G +HY CV DLL R+G ++RAY+ I E+
Sbjct: 343 FLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
P++PT +W LL+AC +G ++G+ + + +LD + G++V+ SN+ A TGRWEE +
Sbjct: 402 PIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMN 461
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
+VRK M + G+ K GCS I + N +H F A D SH + E + M+ ++ E++K GY+P
Sbjct: 462 MVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Query: 498 DTNFALY-DVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
+T+ + ++ EEEK T + +HSEK+A++FGL+ PG +RI KNLR+C DCHS K +
Sbjct: 522 NTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLV 581
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S + R +I+RD NRFH F DG CSC DYW
Sbjct: 582 SMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ++P+ +TF L KA ++ G+Q H +A+K+G +V + +MY++ G
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A MFD M + ++NA I+ +V P A+ F ++ G +P +T + L+A
Sbjct: 189 VRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSA 248
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L+LGR +H ++ + D V V L+D Y KC + A VF + ++ +W
Sbjct: 249 CALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAW 308
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
M+V Y + MF +++G++P D VL AC+ + G +
Sbjct: 309 SVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE 368
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+ I + D+ + G ++ A +++P + + W ++ A G DM
Sbjct: 369 YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKR 428
Query: 300 SFEEMTSM 307
FE + +
Sbjct: 429 VFERILEL 436
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 325/574 (56%), Gaps = 8/574 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +ASS+ P K++HA+ L++G + + G A ++FDEM +
Sbjct: 16 LLRASSSK--PKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+ WN V P ++ + +R G PD T+ + A S G LH
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
+V+ GF V LV Y K E+ A+ +F+ + K+ V+W + L V VQ
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
+ F + V+ F + S+LSAC ++ LE+G ++ A K ++ NI V +A +D
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PN 314
M+ KCG+ + A + F +M +RN+V W+ +I GYA G + AL+ F T+M+ E + PN
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF---TTMQNEGLRPN 310
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLK--YGIKPGAEHYACVVDLLGRAGLVDRAYE 372
YVT + VLSACS AG V +G + F M ++P EHYAC+VDLLGR+GL++ AYE
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYE 370
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
IK+MP+ P +WGALL AC V+ LG+ AD L + P+ HVLLSN++AA G+
Sbjct: 371 FIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGK 430
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W+ D VR +M+ +G KK A S + + +IH F D SH ++ I L ++ ++++
Sbjct: 431 WDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRK 490
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
GY+PDT +DVE EEK + HHSEK+A+AFGLI PG PIR+ KNLR C DCH+
Sbjct: 491 MGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAF 550
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S + E+I+RD NRFH F +G CSC ++W
Sbjct: 551 SKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 190/419 (45%), Gaps = 30/419 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P++FT+P + KA S L G LHA +K G V MY K G
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGE 159
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F+ M ++L WNA+++ V G A++ F + + D T + L+A
Sbjct: 160 LSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L++G +++ + D N+ V N +D + KC A+V+F+ + +N VSW
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y N + +F T + EG+ P VLSAC+ + G+ ++ V+
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 241 A---CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ +E + +VD+ G+ G +++A KMP E + W A++G A H DM
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA--VHRDM 397
Query: 297 ALSSFEEMTSMRCEAVPN----YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
L +++ + E P+ +V L + +A + V+K S K G K A
Sbjct: 398 ILG--QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK----VRSKMRKLGTKKVAA 451
Query: 353 HYACVVDLLGRAGLVDRA----------YEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
+ + V+ G+ +R YE + E+ + I G + + C V+ E+
Sbjct: 452 YSS--VEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKK--IRKMGYVPDTCSVFHDVEM 506
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 243/684 (35%), Positives = 355/684 (51%), Gaps = 121/684 (17%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F +P L K++ G HA LK G D FV + DMY++ G A
Sbjct: 96 VRPDAFVYPILIKSAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHAR 150
Query: 66 KMFDE---------------------------------MPERNLATWNAYIS-------- 84
K+FDE MPERN+ TW A ++
Sbjct: 151 KVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDL 210
Query: 85 ------------------NAVLGGRPKNA-----IDAFINLRRTGGEPDLITFCAFLNAC 121
NA+L G +N + F + G EPD T+ ++AC
Sbjct: 211 EAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISAC 270
Query: 122 SD----CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------- 170
S C L R LH + N V L+D Y KC +G A+ +FD
Sbjct: 271 SSRGDPCLAASLVRTLH----QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRN 326
Query: 171 --------------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMF---LT 202
G +D +N V+W SM+ Y QN + ++F +T
Sbjct: 327 SVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT 386
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
A++ + P + + SV+SAC + LELG V + ++ +I +A++ MY +CGS
Sbjct: 387 AKK--LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGS 444
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
++DA+ F +M R++V +N +I G+A GH A++ M E P+ VT + VL
Sbjct: 445 MEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE--PDRVTFIGVL 502
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
+ACS AG +E+G K+F S+ P +HYAC+VDLLGR G ++ A ++ MPM P
Sbjct: 503 TACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPH 557
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
V+G+LLNA R++ + ELG +AA+ LF+L+P++SGN +LLSN++A+ GRW++ + +R+
Sbjct: 558 AGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREA 617
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
MK G+KK G SW+ ++H F D SHER+ +I +L +LR++M+ AGYI D +
Sbjct: 618 MKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCV 677
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
L DVEEEEK VG HSEK+A+ + L+ G IR+ KNLR+C DCH+A K IS + GR
Sbjct: 678 LRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGR 737
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
+IVRDNNRFH F DG CSC DYW
Sbjct: 738 VIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 126/345 (36%), Gaps = 83/345 (24%)
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
++F+ ++ N + SML Y + MF + GV P F+ ++ +
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG--- 111
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK-------------- 272
G HA +K + FV +A++DMY + G I A F++
Sbjct: 112 --NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 273 -------------------MPERNL-------------------------------VCWN 282
MPERN+ V WN
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 283 AIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
A++ GYA G A+ L F+EM + E P+ T V V+SACS G + ++
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIE--PDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
K I+ ++D+ + G + A I E+ W A+++A G +
Sbjct: 288 QKQ-IQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLD-- 344
Query: 403 RIAADNLFKLDPNDSGNHVLLSNM----FAATGRWEEADLVRKEM 443
+A LF P G +V+ N +A G+ A + KEM
Sbjct: 345 --SARELFNTMP---GRNVVTWNSMIAGYAQNGQSAMAIELFKEM 384
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 324/550 (58%), Gaps = 3/550 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K+LH +LK +++ V + Y+K G A ++F + + + +WNA I
Sbjct: 770 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 829
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
P+ ++DA + ++ +G PD T C+ L+ACS L+LG+++HGF++R+ + ++ V
Sbjct: 830 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 889
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++ Y C E+ + +FD + DK+ VSW +++ Y+QN + +F G++
Sbjct: 890 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 949
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
+ V AC+ + L LGR HA A+K +E + F+ +L+DMY K GSI +
Sbjct: 950 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 1009
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
FN + E++ WNA+I GY G A A+ FEEM R P+ +T + VL+AC+ +G
Sbjct: 1010 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM--QRTGHNPDDLTFLGVLTACNHSG 1067
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII-KEMPMRPTISVWGA 388
+ +G++ M +G+KP +HYACV+D+LGRAG +D+A ++ +EM + +W +
Sbjct: 1068 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 1127
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL++CR++ E+G A LF+L+P N+VLLSN++A G+WE+ VR+ M ++ +
Sbjct: 1128 LLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 1187
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+K AGCSWI + ++ F + + EI+++ + L ++ GY PDT +D+ E
Sbjct: 1188 RKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSE 1247
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
EEK+ ++ HSEK+AL +GLI G IR+ KNLRIC DCH+A K IS ++ RE++VRD
Sbjct: 1248 EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRD 1307
Query: 569 NNRFHRFWDG 578
N RFH F +G
Sbjct: 1308 NKRFHHFKNG 1317
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 165/336 (49%), Gaps = 8/336 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ FT+PC+ KA + + G +H L +K+G + DVFVG + Y G DA ++
Sbjct: 540 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 599
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----PDLITFCAFLNACSD 123
FD MPERNL +WN+ I G + + + G+ PD+ T L C+
Sbjct: 600 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 659
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ LG+ +HG+ V+ D + + N L+D Y KC + A+++F +KN VSW +M
Sbjct: 660 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 719
Query: 184 LVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+ + + + + A E V+ + I + + C + L + +H ++K
Sbjct: 720 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 779
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
N V +A V Y KCGS+ A+ F+ + + + WNA+IGG+A ++L +
Sbjct: 780 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 839
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
+M +P+ T+ +LSACS+ ++ G ++
Sbjct: 840 LQMKI--SGLLPDSFTVCSLLSACSKLKSLRLGKEV 873
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 8/372 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK +H A+K ++ + + DMYSK G +A +F +N+ +WN +
Sbjct: 666 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 725
Query: 89 GGRPKNAIDAFINLRRTGGE---PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
G D + GGE D +T + C S L ++LH + ++ F N
Sbjct: 726 EGDTHGTFDVLRQML-AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 784
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V N V Y KC + A+ VF GI K SW +++ + Q+ + L +
Sbjct: 785 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 844
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G+ P F + S+LSAC+++ L LG+ VH ++ +E ++FV +++ +Y CG +
Sbjct: 845 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 904
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ F+ M +++LV WN +I GY G D AL F +M + ++++ V AC
Sbjct: 905 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG--ISMMPVFGAC 962
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S ++ G + ++ LK+ ++ A ++D+ + G + ++ ++ + + T S
Sbjct: 963 SLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS- 1020
Query: 386 WGALLNACRVYG 397
W A++ ++G
Sbjct: 1021 WNAMIMGYGIHG 1032
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 22/324 (6%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCS-AFDMYSKTGLKDDADKMFDEMPER 74
L +AS G+++H L S ++ + V C+ MY+ G DD+ +FD + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQL 133
NL WNA IS+ ++ FI + T PD T+ + AC+ S + +G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--- 190
HG +V++G +V V N LV FYG V A +FD + ++N VSW SM+ V+ N
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 191 ---------YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
EENG F+ P + +VL CAR + LG+ VH AVK
Sbjct: 625 EESFLLLGEMMEENGDGAFM--------PDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++ + + +AL+DMY KCG I +A++ F +N+V WN ++GG++ +G
Sbjct: 677 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 736
Query: 302 EEMTSMRCEAVPNYVTLVCVLSAC 325
+M + + + VT++ + C
Sbjct: 737 RQMLAGGEDVKADEVTILNAVPVC 760
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 3/347 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P+ FT L A S L GK++H +++ D+FV S +Y G
Sbjct: 842 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 901
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+FD M +++L +WN I+ + G P A+ F + G + I+ A
Sbjct: 902 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 961
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L+LGR+ H + ++ + + + L+D Y K + + VF+G+ +K+ SW
Sbjct: 962 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 1021
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+M++ Y + + ++F +R G P D VL+AC + G R + +
Sbjct: 1022 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 1081
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDA--EIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
++ N+ + ++DM G+ G + A +A E ++ W +++ + +M
Sbjct: 1082 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 1141
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
++ + E NYV L + + + V K + M+L+
Sbjct: 1142 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 1188
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 20/315 (6%)
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV- 148
G +++ DAF+ +R G L A +++GR++H + S N V
Sbjct: 426 GDDESSSDAFLLVREALG--------LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 477
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN--YEE--ENGCQMFLTAR 204
C ++ Y C ++ VFD + KN W +++ Y +N Y+E E +M T
Sbjct: 478 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT- 536
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
+ P F V+ ACA ++ + +G +VH + VK + ++FVG+ALV YG G +
Sbjct: 537 --DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 594
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA--VPNYVTLVCVL 322
DA F+ MPERNLV WN++I ++ G ++ + EM + +P+ TLV VL
Sbjct: 595 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 654
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
C+R + G K + +K + ++D+ + G + A I K M
Sbjct: 655 PVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKN 712
Query: 383 ISVWGALLNACRVYG 397
+ W ++ G
Sbjct: 713 VVSWNTMVGGFSAEG 727
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/592 (36%), Positives = 324/592 (54%), Gaps = 14/592 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN + L ++ GKQ+H+ +++ ++ V + +MY + G
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGW 238
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +FD M +N TW + + + A++ F + G E D F L
Sbjct: 239 LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKV 298
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C +GRQ+H +V+ G + VSV LVDFY KC ++ A F I + NDVSW
Sbjct: 299 CCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSW 358
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + Q+ E+ ++F + R EGV F+ +SV ACA A L +G H A+K
Sbjct: 359 SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ ++ SA+V MY KCG + A AF + E + V W AII GYA+ G+A AL
Sbjct: 419 RGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGF 478
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M S PN VT + VL+ACS +G V + + SM+ YG+KP +HY C++D
Sbjct: 479 FRRMQSYGVR--PNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDT 536
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
RAGL+ A E+I MP P W +LL C + +LG+IAA+NLF+LDP D+ +
Sbjct: 537 YSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGY 596
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+LL N+++A G+WEEA VRK M + +KK CSWISVK ++H F D H + +
Sbjct: 597 ILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHH---PQTE 653
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEE------EKMTEVGHHSEKIALAFGLIAIPPG 534
A+ +KL EE K + + D+ L + E++ + ++ HSEK+A+AFGLI+
Sbjct: 654 AIYSKL-EEFKCS--VIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDN 710
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PI + KNLR C DCH K +S + GR+++VRD+ RFH F G CSC+DYW
Sbjct: 711 APILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 197/401 (49%), Gaps = 22/401 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLH-----ALALKSGQIHDVFVGCSAFDMYSKTGL 60
+S ++ CLF+A L G+ +H + SG I + + MY G
Sbjct: 83 VSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL-----RMYCDCGS 137
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D K+FDEM +NL +W IS G + AI F +++ +G P+ + + L +
Sbjct: 138 CIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQS 197
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C S L+LG+Q+H ++R+ + N++V + + Y +C + AK+VFDG+ +N V+W
Sbjct: 198 CLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTW 257
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++V Y Q + E ++F EGVE +F+ S VL C + ++GR +H+ VK
Sbjct: 258 TGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVK 317
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E + VG+ LVD Y KCG I+ A +F ++ E N V W+A+I G++ G + +
Sbjct: 318 LGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKI 377
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F TS+R E V N V AC+ + G + + +K G+ + +V
Sbjct: 378 F---TSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQA-HGDAIKRGLVSYLYGESAMVT 433
Query: 360 LLGRAGLVD---RAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ + G +D RA+E I E P W A+++ +G
Sbjct: 434 MYSKCGRLDYARRAFESIDE----PDAVAWTAIISGYAYHG 470
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/590 (35%), Positives = 330/590 (55%), Gaps = 14/590 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R SP+ F+FP + K+ ++L +PV+G+QLH ++ G + FV + MY K GL
Sbjct: 41 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGL 100
Query: 61 KDDADKMFDEMPERNL--ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+DA K+F+E P + +NA IS + +A F ++ TG D +T +
Sbjct: 101 VEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLV 160
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ L LGR LHG V+ G V+V N + Y KC V + +FD + K +
Sbjct: 161 PLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLI 220
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+W +++ Y QN + ++F + GV P F + SVLS+CA + ++G+ V +
Sbjct: 221 TWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELV 280
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
N+F+ +AL+ MY +CG++ A F+ MP ++LV W A+IG Y G + L
Sbjct: 281 EANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGL 340
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F++M P+ V VLSACS +G +KG+++F +M +Y ++PG EHY+C+V
Sbjct: 341 TLFDDMIKRGIR--PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 398
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLLGRAG +D A E I MP+ P +VWGALL AC+++ ++ +A + + +P + G
Sbjct: 399 DLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIG 458
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
+VL+SN+++ + E +R M++ +K G S++ K ++H+F A D SHE+ E
Sbjct: 459 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEE 518
Query: 479 IQAMLTKLREE-MKAAGYIPDTNFALYDVEE-EEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+ ML +L M+ AG + D + EE + HSE++A+AFG++ PG
Sbjct: 519 VHRMLDELETSVMELAGNM--------DCDRGEEVSSTTREHSERLAIAFGILNSIPGTE 570
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I + KNLR+C DCH K +S IV R +VRD +RFH F DG CSC DYW
Sbjct: 571 ILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 6/337 (1%)
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGF 136
+WN + +I + ++ R+G PD +F L +C+ SL G+QLH
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 137 LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC--SMLVVYVQNYEEE 194
++R G + V L+ Y KC V A+ VF+ + + C +++ Y N +
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALV 254
+ MF + GV I ++ C L LGRS+H VK + V ++ +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 255 DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN 314
MY KCGS++ F++MP + L+ WNA+I GY+ G A L FE+M S P+
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKS--SGVCPD 253
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEII 374
TLV VLS+C+ GA + G ++ + G P ++ + R G + +A +
Sbjct: 254 PFTLVSVLSSCAHLGAKKIGQEV-GELVEANGFAPNVFLSNALISMYARCGNLAKARAVF 312
Query: 375 KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
MP++ +S W A++ ++G E G D++ K
Sbjct: 313 DIMPVKSLVS-WTAMIGCYGMHGMGETGLTLFDDMIK 348
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 327/576 (56%), Gaps = 3/576 (0%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T +F + + G+ +H +K+ + + DMYSK G D A +F EM
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
R++ ++ + I+ G A+ F + G PD+ T A LN C+ LL G+
Sbjct: 358 SGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGK 417
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H ++ + ++ V N L+D Y KC + A++VF + K+ +SW +++ Y +N
Sbjct: 418 RVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Query: 192 EEENGCQMF-LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+F L + P + ++ VL ACA ++ + GR +H ++ + V
Sbjct: 478 YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++LVDMY KCG++ A + F+ + ++LV W +I GY G A++ F +M E
Sbjct: 538 NSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P+ ++ V +L ACS +G V++G + F M + I+P EHYAC+VD+L R G + +A
Sbjct: 598 --PDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKA 655
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
Y I+ MP+ P ++WGALL CR++ +L A+ +F+L+P ++G +VL++N++A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
+WEE +RK + G++K GCSWI +K R++IF A D+S+ +I+A L +R M
Sbjct: 716 EKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARM 775
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
GY P T +AL D EE EK + HSEK+A+A G+I+ G IR+TKNLR+CGDCH
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 835
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S + RE+++RD+NRFH+F DG+CSC +W
Sbjct: 836 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 210/392 (53%), Gaps = 3/392 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ + +TF C+ K+ S+L G+QLH LKSG VG S Y K D A
Sbjct: 191 VEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSAR 250
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FDEM ER++ +WN+ I+ V G + + F+ + +G E DL T + C+D
Sbjct: 251 KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSR 310
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+ LGR +H F V++ F CN L+D Y KC ++ AKVVF + ++ VS+ SM+
Sbjct: 311 LISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIA 370
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + ++F EG+ P + +++VL+ CAR L+ G+ VH + +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF 430
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+IFV +AL+DMY KCGS+++AE+ F++M ++++ WN +IGGY+ +A+ ALS F +
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
+ P+ T+ CVL AC+ A +KG +I + ++ G +VD+ + G
Sbjct: 491 VEK-RFSPDERTVACVLPACASLSAFDKGREI-HGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ A + ++ + +S W ++ ++G
Sbjct: 549 ALLLARLLFDDITSKDLVS-WTVMIAGYGMHG 579
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 6/363 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK++ +G + D +G MY+ G +A ++FD++ WN ++
Sbjct: 113 GKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAK 172
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G +I F + +G E D TF + S + G QLHG++++SGF SV
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSV 232
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N LV FY K + V A+ VFD + +++ +SW S++ YV N E G +F+ G+
Sbjct: 233 GNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI 292
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
E I SV + CA + LGR+VH VKAC + L+DMY KCG + A++
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKV 352
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSR 327
F +M R++V + ++I GYA +G A A+ FEEM E + P+ T+ VL+ C+R
Sbjct: 353 VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE---EGISPDVYTVTAVLNCCAR 409
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+++G ++ + + + ++D+ + G + A + EM ++ IS W
Sbjct: 410 NRLLDEGKRV-HEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIIS-WN 467
Query: 388 ALL 390
++
Sbjct: 468 TVI 470
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 159/341 (46%), Gaps = 13/341 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E ISP+ +T + + + GK++H ++ D+FV + DMY+K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGS 447
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKN-----AIDAF-INLRRTGGEPDLITF 114
+A+ +F EM +++ +W N V+GG KN A+ F + L PD T
Sbjct: 448 MREAELVFSEMRVKDIISW-----NTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTV 502
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L AC+ S GR++HG+++R+G+ + V N LVD Y KC + LA+++FD I
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS 562
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW M+ Y + + +F R+ G+EP + S+L AC+ ++ G
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRF 622
Query: 235 HAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQG 292
+ C +E + + +VDM + G++ A MP + W A++ G
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+A E++ + E YV + + + + V++
Sbjct: 683 DVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKR 723
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 179/434 (41%), Gaps = 54/434 (12%)
Query: 52 FDMYSKTGLKDDADKM--FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
F+ S + D AD + FD R++ N + G KNA+ L G+
Sbjct: 39 FNRASLRTVSDRADSITTFD----RSVTDANTQLRRFCESGNLKNAV----KLLHVSGKW 90
Query: 110 DL--ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
D+ T C+ L C+D L+ G+++ F+ +GF + ++ + L Y C ++ A
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VFD + + + W ++ ++ + +F GVE + S V + + +
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+ G +H +K+ VG++LV Y K + A F++M ER+++ WN+II G
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI---------- 337
Y G A+ LS F +M E + T+V V + C+ + + G +
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEI--DLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328
Query: 338 --------FYSMTLKYGIKPGAE------------HYACVVDLLGRAGLVDRAYEIIKEM 377
M K G A+ Y ++ R GL A ++ +EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 378 P---MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN----MFAAT 430
+ P + A+LN C + G+ + + ND G + +SN M+A
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE---WIKENDMGFDIFVSNALMDMYAKC 445
Query: 431 GRWEEADLVRKEMK 444
G EA+LV EM+
Sbjct: 446 GSMREAELVFSEMR 459
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 335/616 (54%), Gaps = 45/616 (7%)
Query: 14 PCLFKASSALHIPVTG----------KQLHALALKSG--QIHDVFVGCSAFDMYSKTGLK 61
P ++ A +P+ G KQ H+ ++ G +D F SK+G
Sbjct: 11 PPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDL 70
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+ A ++FD++P + +N + +N I + + P+ T+ + AC
Sbjct: 71 NYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC 130
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD----------- 170
++ G+Q+H +++ GF + N L+ Y + A+ VFD
Sbjct: 131 CIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWT 190
Query: 171 ---------GIIDK-----------NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
G +DK N VSW +M+ YVQ+ +F R E V
Sbjct: 191 SLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 250
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
F+ +S+LSAC + LE G+ +H K+ +E + + + ++DMY KCG ++ A F
Sbjct: 251 DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 310
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N++P++ + WN +IGG A G + A+ F+EM R P+ +T V VLSAC+ +G
Sbjct: 311 NELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME--REMVAPDGITFVNVLSACAHSGL 368
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G F MT G+KPG EH+ C+VDLLGRAGL++ A ++I EMP+ P V GAL+
Sbjct: 369 VEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALV 428
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACR++G ELG + +L+P++SG +VLL+N++A+ GRWE+ VRK M D G+KK
Sbjct: 429 GACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKK 488
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
G S I ++ + F A +H + EI A L ++ E +++ GY+PDT+ L+D++EEE
Sbjct: 489 APGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEE 548
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + +HSEK+A+AFGL+ PG +RI+KNLRIC DCH A K IS + RE+I+RD N
Sbjct: 549 KENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRN 608
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 609 RFHHFRMGGCSCKDYW 624
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 35/372 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG----------QIH------- 43
M + +SPN FT+P L +A + GKQ+HA LK G IH
Sbjct: 111 MLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQS 170
Query: 44 --------------DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
DV S YS+ G D A ++F+ MPERN +WNA I+ V
Sbjct: 171 LEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQS 230
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
R A F +R D + L+AC+ L+ G+ +HG++ +SG + + +
Sbjct: 231 NRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLA 290
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
++D Y KC + A VF+ + K SW M+ + + E ++F RE V
Sbjct: 291 TTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVA 350
Query: 210 PKDFMISSVLSACARIAGLELGRSV--HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P +VLSACA +E G+ + V G G +VD+ G+ G +++A
Sbjct: 351 PDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG-CMVDLLGRAGLLEEAR 409
Query: 268 IAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
N+MP + A++G G+ ++ +++ + YV L + ++
Sbjct: 410 KLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAG 469
Query: 327 RAGAVEKGMKIF 338
R V K K+
Sbjct: 470 RWEDVAKVRKLM 481
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/560 (37%), Positives = 310/560 (55%), Gaps = 33/560 (5%)
Query: 50 SAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP 109
S ++ GL +A K+FDEM E+++ TW+A I+ + AI F+ + + G
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV 374
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---------- 159
D + + L+AC++ ++ +G+ +H ++ G + +++ N L+ Y KC
Sbjct: 375 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 434
Query: 160 ---------------------NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
N V AK +FD + +K+ VSW SM+ Y QN +
Sbjct: 435 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 494
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
+F + G +P + + SV+SACAR+A LE G+ VHA + + N+ +G+ L+DMY
Sbjct: 495 LFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYM 554
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG ++ A F M E+ + WNA+I G A G + +L F M +C PN +T
Sbjct: 555 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK--KCHVTPNEITF 612
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ VL AC G V++G FYSM + I+P +HY C+VDLLGRAG + A E++ MP
Sbjct: 613 MGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP 672
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
M P ++ WGALL AC+ +G E+GR L +L P+ G HVLLSN++A+ G+W++
Sbjct: 673 MTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLE 732
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+R M + K GCS I IH F A D +H I+ ML ++ ++K GY PD
Sbjct: 733 IRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPD 792
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
N L DV+EEEK + + HSEK+A+AFGLI I P PIRI KNLRIC DCH+A K IS
Sbjct: 793 INEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISK 852
Query: 559 IVGREVIVRDNNRFHRFWDG 578
R+++VRD +RFH F G
Sbjct: 853 AFCRKIVVRDRHRFHHFEQG 872
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 2/255 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+ S Y K L D+A +FD MPE+++ +W++ IS + F ++
Sbjct: 441 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 500
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+G +PD T + ++AC+ + L+ G+ +H ++ R+G NV + L+D Y KC V
Sbjct: 501 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 560
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A VF G+I+K +W ++++ N E+ MF ++ V P + VL AC
Sbjct: 561 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 620
Query: 224 RIAGLELGR-SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCW 281
+ ++ G+ +++ ++ N+ +VD+ G+ G +Q+AE N+MP ++ W
Sbjct: 621 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 680
Query: 282 NAIIGGYAHQGHADM 296
A++G G ++M
Sbjct: 681 GALLGACKKHGDSEM 695
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 189/449 (42%), Gaps = 76/449 (16%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +++T+P L +A S KQ+H LK G DV+V + + +S
Sbjct: 204 MLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSN 263
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++F+E + +WN+ ++ + G + A +
Sbjct: 264 MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIY--------------------- 302
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
H RS + N ++ +G V A +FD +++K+ V+W
Sbjct: 303 -------------HQMPERS-----IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTW 344
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + QN E + F+ + GV + + S LSACA + + +G+ +H++++K
Sbjct: 345 SALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLK 404
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA----------------- 283
E I + +AL+ MY KCG I A F++ +L+ WN+
Sbjct: 405 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 464
Query: 284 --------------IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+I GYA D L+ F+EM + P+ TLV V+SAC+R
Sbjct: 465 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK--PDETTLVSVISACARLA 522
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+E+G K ++ + G+ ++D+ + G V+ A E+ M + IS W AL
Sbjct: 523 ALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNAL 580
Query: 390 LNACRVYGKPELGRIAADNLFK--LDPND 416
+ + G E N+ K + PN+
Sbjct: 581 ILGLAMNGLVESSLDMFSNMKKCHVTPNE 609
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P++ T + A + L GK +HA ++G +V +G + DMY K G
Sbjct: 499 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 558
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F M E+ ++TWNA I + G ++++D F N+++ P+ ITF L A
Sbjct: 559 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 618
Query: 121 CSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV- 178
C L+ G+ + + NV +VD G+ ++ A+ + + + DV
Sbjct: 619 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA 678
Query: 179 SWCSML 184
+W ++L
Sbjct: 679 TWGALL 684
>gi|22328675|ref|NP_193307.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161477|sp|Q8VYH0.1|PP313_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g15720
gi|18175616|gb|AAL59897.1| unknown protein [Arabidopsis thaliana]
gi|20465541|gb|AAM20253.1| unknown protein [Arabidopsis thaliana]
gi|332658240|gb|AEE83640.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 616
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 321/568 (56%), Gaps = 15/568 (2%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
LH L LK G D F Y K + A K+FDEM E N+ +W + IS G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 92 PKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
P+NA+ F + P+ TF + ACS + ++G+ +H L SG N+ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 151 GLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMF--LTARRE 206
LVD YGKCN+V A+ VFD +I +N VSW SM+ Y QN ++F A
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
FM++SV+SAC+ + L+ G+ H + + E N V ++L+DMY KCGS+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F ++ +++ + ++I A G + A+ F+EM + R PNYVTL+ VL ACS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRIN--PNYVTLLGVLHACS 348
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK--EMPMRPTIS 384
+G V +G++ M KYG+ P + HY CVVD+LGR G VD AYE+ K E+
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+WGALL+A R++G+ E+ A+ L + + + ++ LSN +A +G WE+++ +R EMK
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGY------IPD 498
G K CSWI K+ +++F A D S + + EI+ L L + MK G+ I
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
++ DV+EE K V H E++ALA+GL+ +P G IRI NLR+C DCH AFK IS
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IV RE++VRD NRFH F +G C+C DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 157/359 (43%), Gaps = 15/359 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN++TF +FKA SAL GK +HA SG ++ V S DMY K + A
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 66 KMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAF--INLRRTGGEPDLITFCAFLNAC 121
++FD M RN+ +W + I+ R AI+ F N T + + ++AC
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S LQ G+ HG + R G++ N V L+D Y KC + A+ +F I + +S+
Sbjct: 247 SSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYT 306
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVK 240
SM++ ++ E ++F + P + VL AC+ + G + +A K
Sbjct: 307 SMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEK 366
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDA-EIA--FNKMPERNLVCWNAIIGGYAHQGHADMA 297
V + + +VDM G+ G + +A E+A E+ + W A++ G ++
Sbjct: 367 YGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIV 426
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
+ + + + Y+ L S A AV G + S+ L+ + AC
Sbjct: 427 SEASKRLIQSNQQVTSAYIAL-------SNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/496 (40%), Positives = 299/496 (60%), Gaps = 4/496 (0%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
+N I + + P+ T+ + AC ++ G+Q+H +++ GF + N L
Sbjct: 76 RNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNL 135
Query: 153 VDFYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
+ Y + A+ VFD + D+N VSW +M+ YVQ+ +F R E V
Sbjct: 136 IHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 195
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
F+ +S+LSAC + LE G+ +H K+ +E + + + ++DMY KCG ++ A F
Sbjct: 196 DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 255
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
N++P++ + WN +IGG A G + A+ F+EM R P+ +T V VLSAC+ +G
Sbjct: 256 NELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME--REMVAPDGITFVNVLSACAHSGL 313
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
VE+G F MT G+KPG EH+ C+VDLLGRAGL++ A ++I EMP+ P V GAL+
Sbjct: 314 VEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALV 373
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACR++G ELG + +L+P++SG +VLL+N++A+ GRWE+ VRK M D G+KK
Sbjct: 374 GACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKK 433
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
G S I ++ + F A +H + EI A L ++ E +++ GY+PDT+ L+D++EEE
Sbjct: 434 APGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEE 493
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + +HSEK+A+AFGL+ PG +RI+KNLRIC DCH A K IS + RE+I+RD N
Sbjct: 494 KENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRN 553
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 554 RFHHFRMGGCSCKDYW 569
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 6/343 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +SPN FT+P L +A + GKQ+HA LK G D F + MY
Sbjct: 85 MLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQS 144
Query: 61 KDDADKMFDEMPER--NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
+ A ++FD MP+R N +WNA I+ V R A F +R D + L
Sbjct: 145 LEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASML 204
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
+AC+ L+ G+ +HG++ +SG + + + ++D Y KC + A VF+ + K
Sbjct: 205 SACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS 264
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV--HA 236
SW M+ + + E ++F RE V P +VLSACA +E G+ +
Sbjct: 265 SWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM 324
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
V G G +VD+ G+ G +++A N+MP + A++G G+ +
Sbjct: 325 TEVLGLKPGMEHFG-CMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 383
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ +++ + YV L + ++ R V K K+
Sbjct: 384 LGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 329/588 (55%), Gaps = 6/588 (1%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKS---GQIHDVFVGCSAFDMYSKTG 59
R + PN T L + G +HA L++ V +G + DMY+K
Sbjct: 194 RGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCK 253
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFL 118
A ++F M RN TW+A I VL R A + F ++ G + + L
Sbjct: 254 HLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASAL 313
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + L++G QLH L +SG +++ N L+ Y K + A ++FD I K+ +
Sbjct: 314 RVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI 373
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
S+ ++L YVQN + E +F + V+P + S++ AC+ +A L+ GR H
Sbjct: 374 SYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSV 433
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+ + + ++L+DMY KCG I + F+KMP R++V WN +I GY G A
Sbjct: 434 IIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEAT 493
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F M + E P+ VT +C+++ACS +G V +G F +MT KYGI P EHY C+V
Sbjct: 494 TLFLSMKNQGFE--PDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 551
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
DLL R G +D AY+ I+ MP++ + VWGALL ACR++ +LG+ + + KL P +G
Sbjct: 552 DLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG 611
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N VLLSN+F+A GR++EA VR K G KK GCSWI + +H F D SH + +
Sbjct: 612 NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPD 671
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L + ++K GY DT+F L D+EEEEK + +HSEK+A+AFG++++ I
Sbjct: 672 IYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIF 731
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+TKNLR+CGDCH+A K+++ + R +IVRD NRFH F +G CSC D+W
Sbjct: 732 VTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 198/397 (49%), Gaps = 9/397 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN +TFP + KA SAL G+ +HA A G D+FV + D+Y + A
Sbjct: 95 VPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAA 154
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
+F +MP R++ WNA ++ G +AI ++++ GG P+ T + L +
Sbjct: 155 NVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 125 SLLQLGRQLHGFLVRSGFDGN---VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
L G +H + +R+ D N V + L+D Y KC + A VF G+ +N+V+W
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ +V +F EG+ ++S L CA +A L +G +HA+ K
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAK 334
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + ++ G++L+ MY K G I +A + F+++ ++ + + A++ GY G A+ A
Sbjct: 335 SGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLV 394
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F++M + C P+ T+V ++ ACS A++ G S+ ++ G+ ++D+
Sbjct: 395 FKKMQA--CNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR-GLALETSICNSLIDM 451
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G +D + ++ +MP R +S W ++ ++G
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVS-WNTMIAGYGIHG 487
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 161/349 (46%), Gaps = 23/349 (6%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD +P + +NA I G AID + ++ P+ TF L ACS
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ L GR +H G ++ V L+D Y +C G A VF + ++ V+W +M
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 184 LVVYVQNYEEENGCQMFLTAR-REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
L Y + + L + R G+ P + S+L A+ L G SVHA ++A
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAY 231
Query: 243 VEGN---IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
++ N + +G+AL+DMY KC + A F+ M RN V W+A+IGG+ A +
Sbjct: 232 LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFN 291
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI--------FYSMTLKYGIKPGA 351
F++M V +C LSA S A A+ + +++ K GI
Sbjct: 292 LFKDML----------VEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + +AGL++ A + E+ ++ TIS +GALL+ GK E
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALLSGYVQNGKAE 389
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 6/233 (2%)
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
++ LA+ VFD I + ++ +++ Y ++ + V P + VL
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
AC+ +A L GR++HA A + ++FV +AL+D+Y +C A F KMP R++V
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVA 167
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
WNA++ GYA+ G A++ +M R PN TLV +L ++ GA+ +G + ++
Sbjct: 168 WNAMLAGYANHGMYHHAIAHLLDMQD-RGGLRPNASTLVSLLPLLAQHGALFQGTSV-HA 225
Query: 341 MTLKYGIKPGAEHY---ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
L+ + E ++D+ + + A + M +R ++ W AL+
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT-WSALI 277
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 317/581 (54%), Gaps = 40/581 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN +T+P + KA S L G ++H+ A G DVFV + D Y+K G+ +A
Sbjct: 105 VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ 164
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F M R++ WNA I+ L G +A+ + ++ G P+ T L C C
Sbjct: 165 RLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ-CL 223
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L A+ +FD + +N+VSW +M+
Sbjct: 224 LY-------------------------------------ARKIFDVMGVRNEVSWSAMIG 246
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
YV + + +F + G++P + VL AC+ +A L+ G H +
Sbjct: 247 GYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT 306
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
+ + +AL+DMY KCG I A FN+M ++V WNA+I GY G AL F ++
Sbjct: 307 DTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLL 366
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
++ + P+ +T +C+LS+CS +G V +G F +M+ + I P EH C+VD+LGRAG
Sbjct: 367 ALGLK--PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAG 424
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
L+D A+ I+ MP P + +W ALL+ACR++ ELG + + L P +GN VLLSN
Sbjct: 425 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSN 484
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
+++A GRW++A +R KD G+KK GCSWI + +H F D SH + ++I L +
Sbjct: 485 IYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEE 544
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRI 545
L EMK GY + +F DVEEEEK + +HSEK+A+AFG++ + G PI +TKNLR+
Sbjct: 545 LLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRV 604
Query: 546 CGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
CGDCH+A KF++ I RE+ VRD NRFH F +G C+C D+W
Sbjct: 605 CGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+ L AC L +++H +++ + + SV + L Y CN+V LA+ +FD I
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ + + W ++ Y N + ++ + GV P + VL AC+ + +E G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H+ A +E ++FV +ALVD Y KCG + +A+ F+ M R++V WNA+I G + G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS 326
D A+ +M E + PN T+V VL C
Sbjct: 190 LCDDAVQLIMQMQE---EGICPNSSTIVGVLPTCQ 221
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 218 VLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERN 277
+L AC + L + +H +K + V L +Y C + A F+++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 278 LVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
++ WN II YA G D A+ + M + PN T VL ACS A+E G++I
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVR--PNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 338 FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+S +G++ +VD + G++ A + M R ++ W A++ C +YG
Sbjct: 132 -HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLYG 189
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 116/311 (37%), Gaps = 48/311 (15%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P+ T + A S L G H + G D + + DMYSK G
Sbjct: 264 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGK 323
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+ M ++ +WNA I + G A+ F +L G +PD ITF L++
Sbjct: 324 ISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L+ GR + R + C +VD G+ G+ID+
Sbjct: 384 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRA-----------GLIDE---- 428
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
F+ R EP + S++LSAC +ELG V
Sbjct: 429 -----------------AHHFI--RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 469
Query: 240 KACVE--GNIFVGSALVDMYGKCGSIQDA--------EIAFNKMPERNLVCWNAIIGGYA 289
E GN + L ++Y G DA + K+P + + N I+ +
Sbjct: 470 SLGPESTGNFVL---LSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFV 526
Query: 290 HQGHADMALSS 300
+ + LS
Sbjct: 527 GGDQSHLQLSQ 537
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/486 (41%), Positives = 294/486 (60%), Gaps = 7/486 (1%)
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ R G +P+ T+ L A S ++ H ++ + + SV L+D Y K
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
V A VF I +K+ V+W +M+ Y Q + E ++F+ +E ++P ++ S +++A
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 222 CAR-IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
CA AG+E G+ +HA ++K+ + V SAL+ MY K G I+ A F + ER+LV
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176
Query: 281 WNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
WN+II GYA G+ AL FEEM E + VT + V+SAC+ G +G + F
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEM--DGVTFIGVISACTHTGLANEGQRYFDI 234
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
M + I+P EHY+C+VDL GRAG++ +A EII EMP + +VW LL A ++ E
Sbjct: 235 MVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLE 294
Query: 401 LGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVK 460
+G++AAD L L P + ++VLL+NM+A+ G W+E VRK M++ +KK AG SWI VK
Sbjct: 295 VGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVK 354
Query: 461 NRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSE 520
N+ + F A D SH + +I A L +L ++K AGY PDT++ DV+EE K + HSE
Sbjct: 355 NKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSE 414
Query: 521 KIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYC 580
++A+AFGLI PPG P++I KNLR+CGDCHS K IS + GR+++VRD+NRFH F G C
Sbjct: 415 RLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLC 474
Query: 581 SCSDYW 586
SC DYW
Sbjct: 475 SCGDYW 480
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 155/322 (48%), Gaps = 7/322 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE I PNDFT+ + A V+ ++HA A+K + VG + D Y K G
Sbjct: 1 MSREGIKPNDFTYSTILTAQPG----VSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A K+F + E+++ W+A I G + A+ F+ + + +P+ TF +NA
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 121 CSDCSL-LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ + ++ G+QLH + ++S F+ + V + L+ Y K ++ A VF +++ VS
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ Y Q+ ++F +R+ +E V+SAC G+ + V
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236
Query: 240 K-ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
K +E + S +VD+YG+ G + A N+MP + W ++ + ++
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVG 296
Query: 298 LSSFEEMTSMRCEAVPNYVTLV 319
+ +++ S++ + +YV L
Sbjct: 297 KLAADKLISLQPQNPASYVLLT 318
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 324/582 (55%), Gaps = 11/582 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ T + A L G+Q+H L++ D + S MYS GL ++A+
Sbjct: 304 VDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAE 363
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F R+L +W A IS P+ A++ + + G PD IT L+ACS
Sbjct: 364 TVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLC 423
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L +G LH + G V N L+D Y KC + A +F ++KN VSW S+++
Sbjct: 424 NLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIIL 483
Query: 186 VYVQNYEEENGCQMFLTARREGV---EPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
N N C L RE + +P + VLSACARI L G+ +HA A++
Sbjct: 484 GLRIN----NRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTG 539
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
V + F+ +A++DMY +CG ++ A F + + + WN ++ GYA +G A F+
Sbjct: 540 VSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQ 598
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + PN VT + +L ACSR+G V +G++ F SM KY I P +HYACVVDLLG
Sbjct: 599 RM--VESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLG 656
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R+G ++ AYE I++MPM+P +VWGALLN+CR++ ELG +AA+N+F+ D G ++L
Sbjct: 657 RSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYIL 716
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A G+W++ VRK M+ G+ GCSW+ VK +H F + D H + EI A+
Sbjct: 717 LSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINAL 776
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L + ++MK AG + + D+ E K HSE++A+ FGLI PG+PI +TKN
Sbjct: 777 LERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKN 835
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
L +C CH+ KFIS V RE+ VRD +FH F G CSC+D
Sbjct: 836 LYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 214/430 (49%), Gaps = 14/430 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFPC+ + + V G+++H ++ G DV V + MY K G + A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD+MP R+ +WNA IS G + F + + +PDL+T + + AC
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+LGRQ+HG+++R+ F + S+ N L+ Y + A+ VF ++ VSW +M+
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + + EG+ P + I+ VLSAC+ + L++G ++H VA + +
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
V ++L+DMY KC I A F+ E+N+V W +II G AL F EM
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMI 502
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
PN VTLVCVLSAC+R GA+ G +I ++ L+ G+ ++D+ R G
Sbjct: 503 R---RLKPNSVTLVCVLSACARIGALTCGKEI-HAHALRTGVSFDGFMPNAILDMYVRCG 558
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA-ADNLFK--LDPNDSGNHVL 422
++ A++ + + ++ W LL G E G+ A A LF+ ++ N S N V
Sbjct: 559 RMEYAWK--QFFSVDHEVTSWNILLT-----GYAERGKGAHATELFQRMVESNVSPNEVT 611
Query: 423 LSNMFAATGR 432
++ A R
Sbjct: 612 FISILCACSR 621
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 179/350 (51%), Gaps = 6/350 (1%)
Query: 47 VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG 106
+G + M+ + G DA +F M +RNL +WN + G A+D + + G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 107 GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAK 166
+PD+ TF L C L GR++H ++R GF+ +V V N L+ Y KC +V A+
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
+VFD + +++ +SW +M+ Y +N G ++F + V+P ++SV++AC +
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
LGR +H ++ + + ++L+ MY G I++AE F++ R+LV W A+I
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY + AL +++ M + E + P+ +T+ VLSACS ++ GM + + + +
Sbjct: 383 GYENCLMPQKALETYKMMEA---EGIMPDEITIAIVLSACSCLCNLDMGMNL-HEVAKQK 438
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
G+ + ++D+ + +D+A EI + I W +++ R+
Sbjct: 439 GLVSYSIVANSLIDMYAKCKCIDKALEIFHS-TLEKNIVSWTSIILGLRI 487
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 4/320 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P++ T + A S L G LH +A + G + V S DMY+K
Sbjct: 400 MEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKC 459
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F E+N+ +W + I + R A+ F + R +P+ +T L+A
Sbjct: 460 IDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSA 518
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L G+++H +R+G + + N ++D Y +C + A F +D SW
Sbjct: 519 CARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFS-VDHEVTSW 577
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+L Y + + + ++F V P + S+L AC+R + G +++
Sbjct: 578 NILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKY 637
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
K + N+ + +VD+ G+ G +++A KMP + + W A++ H ++
Sbjct: 638 KYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGE 697
Query: 299 SSFEEMTSMRCEAVPNYVTL 318
+ E + +V Y+ L
Sbjct: 698 LAAENIFQDDTTSVGYYILL 717
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 335/575 (58%), Gaps = 13/575 (2%)
Query: 23 LHIPVTGKQLH------ALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
LH ++ K LH +L L + + H+ + ++S D A K+FD++ + +
Sbjct: 145 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 204
Query: 76 LAT---WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
L T W A G P++A+ ++++ + EP + L AC D L++GR
Sbjct: 205 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG 264
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H +V+ + V N L+ Y + A+ VFDG+ ++N V+W S++ V +
Sbjct: 265 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 324
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+F + E + ++++L AC+R+A L G+ +HA +K+ + ++ + ++
Sbjct: 325 VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 384
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMYGKCG ++ + F+ M ++L WN ++ YA G+ + ++ FE M +
Sbjct: 385 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM--IESGVA 442
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ +T V +LS CS G E G+ +F M ++ + P EHYAC+VD+LGRAG + A +
Sbjct: 443 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 502
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+I+ MP +P+ S+WG+LLN+CR++G +G IAA LF L+P++ GN+V++SN++A
Sbjct: 503 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 562
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT-EIQAMLTKLREEMK 491
W+ D +R+ MK G+KK AGCSW+ VK++I IF A RN+ E + + T+L+E ++
Sbjct: 563 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE 622
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
+GY P+T+ L+DV+EE K V HSE++A + LI GVPIRITKNLR+C DCHS
Sbjct: 623 KSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHS 682
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K +S + R +++RD RFH F DG CSC DYW
Sbjct: 683 WMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 2/315 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F+ KA L G+ +HA +K + D V +Y ++GL DDA
Sbjct: 239 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDAR 298
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD M ERN+ TWN+ IS R + F ++ T L ACS +
Sbjct: 299 KVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVA 358
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+++H +++S +V + N L+D YGKC EV ++ VFD ++ K+ SW ML
Sbjct: 359 ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLN 418
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVE 244
Y N E +F GV P ++LS C+ E G S+ + + V
Sbjct: 419 CYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVS 478
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + LVD+ G+ G I++A MP + + W +++ G+ + + +E
Sbjct: 479 PALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKE 538
Query: 304 MTSMRCEAVPNYVTL 318
+ + NYV +
Sbjct: 539 LFVLEPHNPGNYVMV 553
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I + T + A S + +TGK++HA LKS + DV + S DMY K G
Sbjct: 335 MQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGE 394
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + ++FD M ++LA+WN ++ + G + I+ F + +G PD ITF A L+
Sbjct: 395 VEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSG 454
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG--LVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CSD L + G L + ++ F + ++ + LVD G+ ++ A V + + K
Sbjct: 455 CSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA 513
Query: 179 S-WCSML 184
S W S+L
Sbjct: 514 SIWGSLL 520
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 331/591 (56%), Gaps = 40/591 (6%)
Query: 31 QLHALALKSGQ-IHDVF--VGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
Q+HA L+ IH + + Y+ G + +F + + +L + A I+ A
Sbjct: 45 QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 104
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ G A ++ L + P+ TF + L +CS S G+ +H +++ G +
Sbjct: 105 INGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPY 160
Query: 148 VCNGLVDFYGKCNEV-------------------------------GLAKVVFDGIIDKN 176
V GLVD Y K +V A+ +FD + +++
Sbjct: 161 VATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERD 220
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRSVH 235
VSW M+ Y Q+ + +F +G +P + + + LSAC++I LE GR +H
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIH 280
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ + N+ V +AL+DMY KCGS+++A + FN P +++V WNA+I GYA G++
Sbjct: 281 VFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQ 340
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F+EM + P +T + L AC+ AG V +G++IF SM +YGIKP EHY
Sbjct: 341 DALRLFDEMQGI-TGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYG 399
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+V LLGRAG + RAYEIIK M M +W ++L +C+++G+ LG+ A+ L + +
Sbjct: 400 CLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNIS 459
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+SG +VLLSN++A G +E VR MK+ GI K G S I + N++H F+A D H +
Sbjct: 460 NSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLK 519
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ EI ML K+ E +K+ GY+P+TN L+D+EE EK + HSE++A+A+GLI+ PG
Sbjct: 520 SKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGS 579
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P++I KNLR+C DCH+ K IS I GR++++RD NRFH F DG CSC D+W
Sbjct: 580 PLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 39/316 (12%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I+PN+FTF + K+ S +GK +H LK G D +V D+Y+K G A
Sbjct: 124 INPNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQ 179
Query: 66 KMFDEMPERNLAT-------------------------------WNAYISNAVLGGRPKN 94
K+FD MPER+L + WN I G P +
Sbjct: 180 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSD 239
Query: 95 AIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
A+ F L G +PD IT A L+ACS L+ GR +H F+ S NV VC L+
Sbjct: 240 ALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALI 299
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR-EGVEPKD 212
D Y KC + A +VF+ K+ V+W +M+ Y + ++ ++F + G++P D
Sbjct: 300 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTD 359
Query: 213 FMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDA-EIAF 270
L ACA + G + ++ + ++ I LV + G+ G ++ A EI
Sbjct: 360 ITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIK 419
Query: 271 NKMPERNLVCWNAIIG 286
N E + V W++++G
Sbjct: 420 NMNMEADSVLWSSVLG 435
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 325/574 (56%), Gaps = 22/574 (3%)
Query: 28 TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
T KQ+HA + +G I + S + S T + A +F+ +P + +N IS ++
Sbjct: 24 TLKQVHAHMITTGLIFHTY-PLSRILLISSTIVFTHALSIFNHIPNPTIFLYNTLIS-SL 81
Query: 88 LGGRPKNAIDAFIN---LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR---SG 141
+P I + L T +P+ TF + AC L+ GR LH +++
Sbjct: 82 ANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPT 141
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE--------E 193
D V L+++Y KC +VG + +F+ I + SW S+L YV N
Sbjct: 142 CDPFVQA--ALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLS 199
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
+F+ ++ ++ + + +++SACA + L G H +K ++ N FVG+AL
Sbjct: 200 LEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTAL 259
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV- 312
+DMY KCG + A F+++P R+ +C+NA+IGG+A G+ AL F++MT E +
Sbjct: 260 IDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMT---LEGLA 316
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ VTLV + +CS G VE+G +F SM YG++P EHY C+VDLLGRAG + A E
Sbjct: 317 PDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEE 376
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+ MPM+P +W +LL A RV+G E+G + +L +L+P SGN+VLLSNM+A+ R
Sbjct: 377 RVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINR 436
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W++ VRK MKD GI K G S + V +H F D +H R+ EI L ++ +
Sbjct: 437 WDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHE 496
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
G+ P T L+D+EEEEK + +HSE++A+AF LIA PIRI KNLR+CGDCH++
Sbjct: 497 YGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTS 556
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K IS I RE+IVRD NRFH F +G CSCSDYW
Sbjct: 557 SKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 160/349 (45%), Gaps = 11/349 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
+ + PN FTFP LFKA + G+ LH LK + D FV + + Y+K G
Sbjct: 99 LTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCG 158
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLG--------GRPKNAIDAFINLRRTGGEPDL 111
+F+++ + +LA+WN+ +S V + FI ++++ + +
Sbjct: 159 KVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANE 218
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
+T A ++AC++ L G H ++++ N V L+D Y KC + LA +FD
Sbjct: 219 VTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQ 278
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ ++ + + +M+ + + +F EG+ P D + + +C+ + +E G
Sbjct: 279 LPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEG 338
Query: 232 RSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYA 289
V ++ VE + LVD+ G+ G +++AE MP + N V W +++G
Sbjct: 339 CDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAAR 398
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
G+ ++ + + + E NYV L + ++ +R V++ K+
Sbjct: 399 VHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLM 447
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 335/575 (58%), Gaps = 13/575 (2%)
Query: 23 LHIPVTGKQLH------ALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
LH ++ K LH +L L + + H+ + ++S D A K+FD++ + +
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 76 LAT---WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
L T W A G P++A+ ++++ + EP + L AC D L++GR
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG 257
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+H +V+ + V N L+ Y + A+ VFDG+ ++N V+W S++ V +
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+F + E + ++++L AC+R+A L G+ +HA +K+ + ++ + ++
Sbjct: 318 VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+DMYGKCG ++ + F+ M ++L WN ++ YA G+ + ++ FE M +
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM--IESGVA 435
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ +T V +LS CS G E G+ +F M ++ + P EHYAC+VD+LGRAG + A +
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+I+ MP +P+ S+WG+LLN+CR++G +G IAA LF L+P++ GN+V++SN++A
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT-EIQAMLTKLREEMK 491
W+ D +R+ MK G+KK AGCSW+ VK++I IF A RN+ E + + T+L+E ++
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE 615
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
+GY P+T+ L+DV+EE K V HSE++A + LI GVPIRITKNLR+C DCHS
Sbjct: 616 KSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHS 675
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K +S + R +++RD RFH F DG CSC DYW
Sbjct: 676 WMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 2/313 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P +F+ KA L G+ +HA +K + D V +Y ++GL DDA
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDAR 291
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+FD M ERN+ TWN+ IS R + F ++ T L ACS +
Sbjct: 292 KVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVA 351
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+++H +++S +V + N L+D YGKC EV ++ VFD ++ K+ SW ML
Sbjct: 352 ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLN 411
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVE 244
Y N E +F GV P ++LS C+ E G S+ + + V
Sbjct: 412 CYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVS 471
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + LVD+ G+ G I++A MP + + W +++ G+ + + +E
Sbjct: 472 PALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKE 531
Query: 304 MTSMRCEAVPNYV 316
+ + NYV
Sbjct: 532 LFVLEPHNPGNYV 544
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E I + T + A S + +TGK++HA LKS + DV + S DMY K G
Sbjct: 328 MQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGE 387
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + ++FD M ++LA+WN ++ + G + I+ F + +G PD ITF A L+
Sbjct: 388 VEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSG 447
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG--LVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CSD L + G L + ++ F + ++ + LVD G+ ++ A V + + K
Sbjct: 448 CSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA 506
Query: 179 S-WCSML 184
S W S+L
Sbjct: 507 SIWGSLL 513
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/546 (36%), Positives = 324/546 (59%), Gaps = 4/546 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN FT+PC+ + + G+Q+H+L++K+G D++V DMYSK G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++ + + E+++ +W + I+ V K+A+ AF +++ G PD I + ++
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++ G Q+H + SG+ G+VS+ N LV+ Y +C + A F+ I K++++W
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ E ++F+ + GV+ F S LSA A +A ++ G+ +HA +K
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
VG+AL+ +YGKCGS +DA++ F++M ERN V WN II + G AL
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M E + PN VT + VL+ACS G VE+G+ F SM+ +YGI+P +HYACV+D
Sbjct: 636 FDQMKK---EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+ GRAG +DRA + I+EMP+ VW LL+AC+V+ E+G AA +L +L+P+DS +
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN +A T +W D VRK M+D G++K G SWI VKN +H F D H +I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L + + + GY + +D E+E + HSEK+A+ FGL+++PP +P+R+
Sbjct: 813 YNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRV 872
Query: 540 TKNLRI 545
KNLR+
Sbjct: 873 IKNLRV 878
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 193/391 (49%), Gaps = 4/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P + + + + + G+ +HA K G ++FVG + +Y + G
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +MP R+ T+N IS G ++A++ F ++ +G PD +T + L A
Sbjct: 194 FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAA 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQ G QLH +L ++G + + L+D Y KC +V A V+F+ N V W
Sbjct: 254 CASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV + Q + ++F + G+ P F +L C ++LG +H+++VK
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +++V L+DMY K G ++ A + E+++V W ++I GY AL++
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM +C P+ + L +S C+ A+ +G++I + + G + +V+L
Sbjct: 434 FKEM--QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNL 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G + A+ +E+ + I+ W L++
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEIT-WNGLVS 520
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 6/418 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ T L A ++L G QLH+ K+G D + S D+Y K G
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ N+ WN + + + F ++ G P+ T+ L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG Q+H V++GF+ ++ V L+D Y K + A+ V + + +K+ VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ ++ F ++ G+ P + ++S +S CA I + G +HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ G++ + +ALV++Y +CG I++A +F ++ ++ + WN ++ G+A G + AL
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T V LSA + +++G +I ++ +K G E ++ L
Sbjct: 535 FMRMDQSGVKH--NVFTFVSALSASANLAEIKQGKQI-HARVIKTGHSFETEVGNALISL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPND 416
G+ G + A EM R +S W ++ +C +G+ D + K + PND
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 180/361 (49%), Gaps = 6/361 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++HA A+ G VG D+YSK GL A ++F+E+ R+ +W A +S G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A+ + + R G P + L++C+ L GR +H + GF + V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
++ Y +C LA+ VF + ++ V++ +++ + Q E+ ++F + G+ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
ISS+L+ACA + L+ G +H+ KA + + + +L+D+Y KCG ++ A + F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
N N+V WN ++ + G + SFE M+ + PN T C+L C+
Sbjct: 303 NSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++ G +I +S+++K G + ++D+ + G +++A +++ + + +S W ++
Sbjct: 360 EIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS-WTSM 417
Query: 390 L 390
+
Sbjct: 418 I 418
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 155/323 (47%), Gaps = 5/323 (1%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQL 129
M R A+ ++ + P + F + R G + F L AC + Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++H V G V N L+D Y K V A+ VF+ + +++VSW +ML Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N E ++ R GV P +++SSVLS+C + GR +HA K IFV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+A++ +Y +CGS + AE F MP R+ V +N +I G+A GH + AL FEEM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ VT+ +L+AC+ G ++KG ++ +S K GI ++DL + G V+
Sbjct: 241 S--PDCVTISSLLAACASLGDLQKGTQL-HSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 370 AYEIIKEMPMRPTISVWGALLNA 392
A I R + +W +L A
Sbjct: 298 ALVIFNSSD-RTNVVLWNLMLVA 319
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/589 (36%), Positives = 315/589 (53%), Gaps = 33/589 (5%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTG----------------------------- 59
GKQ+H+L + SG D F+ + YSK G
Sbjct: 81 GKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQ 140
Query: 60 LKD--DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
L D A K+FDEM ERN+ATWNA I+ K A+ F + G PD T +
Sbjct: 141 LGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSV 200
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L G+++H L++ GF+ + V + L Y K + + + + +
Sbjct: 201 LRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTV 260
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
V+W +++ QN E + + G P SVLSAC+ +A L G+ +HA
Sbjct: 261 VAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAE 320
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+KA + V S+L+ MY + G ++D+ AF ++V W+++I Y G + A
Sbjct: 321 VIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEA 380
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F +M ++ EA N VT + +L ACS +G EKG + F M KY +KP EHY CV
Sbjct: 381 LELFHQMEDLKMEA--NEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCV 438
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG ++ A +I+ MP++P +W LL AC+++ + E+ ++ + KLDP D+
Sbjct: 439 VDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDA 498
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
++VLLSN+ A+ W +RK M+D ++K G SW+ +KN +H F D SH +
Sbjct: 499 ASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYF 558
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
EI L +L E+K GY+P+ L+D++ EEK + HHSEK A+AF L+ VPI
Sbjct: 559 EIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPI 618
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+A K IS I RE+IVRD +RFH F DG CSC +YW
Sbjct: 619 RVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT + + + L + G+++HA LK G VG S MY K+G D +K+
Sbjct: 192 PDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKL 251
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
MP R + WN I+ G P+ ++ + ++ G PD ITF + L+ACS+ + L
Sbjct: 252 IKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATL 311
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND---VSWCSML 184
G+Q+H ++++G ++V + L+ Y + G + +D+ + V W SM+
Sbjct: 312 GQGQQIHAEVIKAGASSVLAVVSSLISMYSRS---GCLEDSIKAFVDRENFDVVLWSSMI 368
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-V 243
Y + E ++F +E + S+L AC+ E G + VK +
Sbjct: 369 AAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKL 428
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ I + +VD+ G+ G +++AE MP + + + W ++ A+MA E
Sbjct: 429 KPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISE 488
Query: 303 EMTSMRCEAVPNYVTL 318
E+ + +YV L
Sbjct: 489 EIIKLDPLDAASYVLL 504
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ S +L +C ++ L G+ VH++ + + + F+ + L++ Y K G + + + F+ M
Sbjct: 64 LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA---------------------- 311
P RN++ +N +I GY G + A F+EM+
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFK 183
Query: 312 -------VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
+P+ TL VL C+ ++ G ++ ++ LK G + + + + + ++
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEV-HACLLKCGFELSSVVGSSLAHMYIKS 242
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
G + ++IK MP+R T+ W L+ G PE
Sbjct: 243 GSLSDGEKLIKSMPIR-TVVAWNTLIAGKAQNGCPE 277
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ P+ TF + A S L G+Q+HA +K+G + V S MYS++G
Sbjct: 286 MKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGC 345
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+D+ K F + ++ W++ I+ GR + A++ F + E + +TF + L A
Sbjct: 346 LEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYA 405
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAK-------VVFDGI 172
CS L + G + +V+ + +VD G+ + A+ V DGI
Sbjct: 406 CSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGI 465
Query: 173 IDKNDVSWCSM 183
I K ++ C +
Sbjct: 466 IWKTLLAACKL 476
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/546 (36%), Positives = 324/546 (59%), Gaps = 4/546 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN FT+PC+ + + G+Q+H+L++K+G D++V DMYSK G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++ + + E+++ +W + I+ V K+A+ AF +++ G PD I + ++
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++ G Q+H + SG+ G+VS+ N LV+ Y +C + A F+ I K++++W
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ E ++F+ + GV+ F S LSA A +A ++ G+ +HA +K
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
VG+AL+ +YGKCGS +DA++ F++M ERN V WN II + G AL
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M E + PN VT + VL+ACS G VE+G+ F SM+ +YGI+P +HYACV+D
Sbjct: 636 FDQMKK---EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+ GRAG +DRA + I+EMP+ VW LL+AC+V+ E+G AA +L +L+P+DS +
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN +A T +W D VRK M+D G++K G SWI VKN +H F D H +I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L + + + GY + +D E+E + HSEK+A+ FGL+++PP +P+R+
Sbjct: 813 YNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRV 872
Query: 540 TKNLRI 545
KNLR+
Sbjct: 873 IKNLRV 878
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 193/391 (49%), Gaps = 4/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P + + + + + G+ +HA K G ++FVG + +Y + G
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +MP R+ T+N IS G ++A++ F ++ +G PD +T + L A
Sbjct: 194 FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAA 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQ G QLH +L ++G + + L+D Y KC +V A V+F+ N V W
Sbjct: 254 CASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV + Q + ++F + G+ P F +L C ++LG +H+++VK
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +++V L+DMY K G ++ A + E+++V W ++I GY AL++
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM +C P+ + L +S C+ A+ +G++I + + G + +V+L
Sbjct: 434 FKEM--QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNL 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
R G + A+ +E+ + I+ W L++
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEIT-WNGLVS 520
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 6/418 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ T L A ++L G QLH+ K+G D + S D+Y K G
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ N+ WN + + + F ++ G P+ T+ L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG Q+H V++GF+ ++ V L+D Y K + A+ V + + +K+ VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ ++ F ++ G+ P + ++S +S CA I + G +HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ G++ + +ALV++Y +CG I++A +F ++ ++ + WN ++ G+A G + AL
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T V LSA + +++G +I ++ +K G E ++ L
Sbjct: 535 FMRMDQSGVKH--NVFTFVSALSASANLAEIKQGKQI-HARVIKTGHSFETEVGNALISL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPND 416
G+ G + A EM R +S W ++ +C +G+ D + K + PND
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 180/361 (49%), Gaps = 6/361 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++HA A+ G VG D+YSK GL A ++F+E+ R+ +W A +S G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A+ + + R G P + L++C+ L GR +H + GF + V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
++ Y +C LA+ VF + ++ V++ +++ + Q E+ ++F + G+ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
ISS+L+ACA + L+ G +H+ KA + + + +L+D+Y KCG ++ A + F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
N N+V WN ++ + G + SFE M+ + PN T C+L C+
Sbjct: 303 NSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++ G +I +S+++K G + ++D+ + G +++A +++ + + +S W ++
Sbjct: 360 EIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS-WTSM 417
Query: 390 L 390
+
Sbjct: 418 I 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 5/323 (1%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQL 129
M R A+ ++ + P + F + R G + F L AC + Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++H V G V N L+D Y K V A+ VF+ + +++VSW +ML Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N E ++ R GV P +++SSVLS+C + GR +HA K IFV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+A++ +Y +CGS + AE F MP R+ V +N +I G+A GH + AL FEEM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ VT+ +L+AC+ G ++KG ++ +S K GI ++DL + G V+
Sbjct: 241 S--PDCVTISSLLAACASLGDLQKGTQL-HSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 370 AYEIIKEMPMRPTISVWGALLNA 392
A +I R + +W +L A
Sbjct: 298 AL-VIFNSSDRTNVVLWNLMLVA 319
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 300/531 (56%), Gaps = 55/531 (10%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
PD+++ L AC+ G+ +HG VRSG ++ V N LVD Y KC V A V
Sbjct: 11 PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE------------------- 209
FD I +K+ VSW +M+ Y Q E+ +F R E +E
Sbjct: 71 FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130
Query: 210 ---------------------------------PKDFMISSVLSACARIAGLELGRSVHA 236
P F IS L ACAR+A L LGR +HA
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190
Query: 237 VAVKACVEGN-IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ + ++V + L+DMY K G I A F+ + ++N V W +++ GY G
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F+EM R P+ VTL+ VL ACS +G +++G++ F SM+ ++G+ PG EHYA
Sbjct: 251 EALEVFDEMR--RVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VDLLGRAG ++ A E+I+ M M P+ VW ALL+ CR++ ELG AA L +L+
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+ G++ LLSN++A RW++ VR MK+ GI+K GCSW+ K F D +H +
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ +I +L L + +K GY+P+T+FAL+DV++EEK+ + HSEK+ALA+G++ PG
Sbjct: 429 SKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGA 488
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PIRITKNLR+CGDCH+A +IS I+ E+I+RD++RFH F G CSCS YW
Sbjct: 489 PIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 170/380 (44%), Gaps = 61/380 (16%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ + + A +++ + GK +H +A++SG D+FVG + DMY+K G+ D+A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE----------------- 108
K+FD + E+++ +WNA ++ GR ++A+ F +R E
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 109 -----------------------------------PDLITFCAFLNACSDCSLLQLGRQL 133
P+ T L AC+ + L+LGRQ+
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 134 HGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
H +++R+ FD + V N L+D Y K ++ +A+ VFD + KN VSW S++ Y +
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG-- 250
+ ++F RR G++P + VL AC+ ++ G K E + G
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK---EFGVIPGQE 305
Query: 251 --SALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ +VD+ G+ G + +A E+ E + + W A++ G + ++ + +++ +
Sbjct: 306 HYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLEL 365
Query: 308 RCEAVPNYVTLVCVLSACSR 327
E +Y L + + R
Sbjct: 366 NSENDGSYTLLSNIYANARR 385
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 53/242 (21%)
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + +VL ACA + G++VH +AV++ ++FVG+ALVDMY KCG + +A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS--------------------- 306
F+++ E+++V WNA++ GY+ G + AL FE+M
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 307 MRCEAV-----------------------------PNYVTLVCVLSACSRAGAVEKGMKI 337
+ CE + PN T+ C L AC+R A+ G +I
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 338 FYSMTLKYGIKPGAEHYA-CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVY 396
++ L+ + A C++D+ ++G +D A + + + +S W +L+ ++
Sbjct: 189 -HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVS-WTSLMTGYGMH 246
Query: 397 GK 398
G+
Sbjct: 247 GR 248
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 321/581 (55%), Gaps = 37/581 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA--- 64
PN +TFP L K+ + G+Q+H LK G D++V S MY + G +DA
Sbjct: 89 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 148
Query: 65 ----------------------------DKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
KMFDE+P +++ +WNA IS G K A+
Sbjct: 149 FDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEAL 208
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
+ F ++ +T PD T ++AC+ ++LGRQ+H ++ GF N+ + N L+D Y
Sbjct: 209 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLY 268
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC E+ A +F+G+ K+ +SW +++ Y + +F R G P D +
Sbjct: 269 SKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 328
Query: 217 SVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
S+L ACA + +++GR +H K V + ++L+DMY KCG I+ A FN +
Sbjct: 329 SILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSIL 388
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEK 333
++L WNA+I G+A G AD +SF+ + MR + P+ +T V +LSACS +G ++
Sbjct: 389 HKSLSSWNAMIFGFAMHGRAD---ASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 445
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G IF SMT Y + P EHY C++DLLG +GL A E+I M M P +W +LL AC
Sbjct: 446 GRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 505
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
+++G ELG A NL K++P + G++VLLSN++A GRW E R + D G+KK G
Sbjct: 506 KMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPG 565
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + + +H F D H RN EI ML ++ ++ AG++PDT+ L ++EEE K
Sbjct: 566 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 625
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
+ HHSEK+A+AFGLI+ PG + I KNLR+C +CH A+K
Sbjct: 626 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 193/408 (47%), Gaps = 42/408 (10%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD----ADKMFDEMPERNLATWNAYISN 85
+ +HA +K+G +H+ S + D A +F+ + E NL WN
Sbjct: 7 RMIHAQMIKTG-LHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L P +A+ ++ + G P+ TF L +C+ + G+Q+HG +++ G D +
Sbjct: 66 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 146 VSVCNGLVDFY---GKCNE----------------------------VGLAKVVFDGIID 174
+ V L+ Y G+ + + A+ +FD I
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
K+ VSW +M+ Y + + ++F + V P + + +V+SACA+ +ELGR V
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H+ N+ + +AL+D+Y KCG ++ A F +P ++++ WN +IGGY H
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLY 305
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG--MKIFYSMTLKYGIKPGAE 352
AL F+EM +R PN VT++ +L AC+ GA++ G + ++ LK G+ +
Sbjct: 306 KEALLLFQEM--LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-GVANASS 362
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++D+ + G ++ A+++ + + ++S W A++ ++G+ +
Sbjct: 363 LRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 409
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 160/348 (45%), Gaps = 12/348 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P++ T + A + G+Q+H+ G ++ + + D+YSK G
Sbjct: 214 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGE 273
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ +P +++ +WN I K A+ F + R+G P+ +T + L A
Sbjct: 274 LETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 333
Query: 121 CSDCSLLQLGRQLHGFLVR--SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
C+ + +GR +H ++ + G S+ L+D Y KC ++ A VF+ I+ K+
Sbjct: 334 CAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 393
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAV 237
SW +M+ + + + +F R+ G+EP D +LSAC+ L+LGR + ++
Sbjct: 394 SWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + ++D+ G G ++AE N M E + V W +++ G+ ++
Sbjct: 454 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 513
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV--------EKGMK 336
S + + + E +YV L + + R V +KGMK
Sbjct: 514 GESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMK 561
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 141/298 (47%), Gaps = 34/298 (11%)
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDF---YGKCNEVGLAKVVFDGIIDKNDVSWC 181
+LQ R +H ++++G + L++F + + A VF+ I + N + W
Sbjct: 1 QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWN 60
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M + + + + ++++ G+ P + +L +CA+ + G+ +H +K
Sbjct: 61 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 120
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ +++V ++L+ MY + G ++DA F++ P R++V + A+I GYA +G+ + A F
Sbjct: 121 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180
Query: 302 EEMT-----------------------------SMRCEAVPNYVTLVCVLSACSRAGAVE 332
+E+ M+ P+ T+V V+SAC+++G++E
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
G ++ +S +G + ++DL + G ++ A + + +P + IS W L+
Sbjct: 241 LGRQV-HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVIS-WNTLI 296
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/584 (36%), Positives = 326/584 (55%), Gaps = 20/584 (3%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-- 73
+ A S+ + G+ +H+ SG ++ V + MY + G ++A K+FD M E
Sbjct: 166 ILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEAL 225
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R++ +WN +S V R K+AI + +R PD +T+ + L+ACS + LGR L
Sbjct: 226 RDVVSWNIMLSTYVHNDRGKDAIQLY---QRMQLRPDKVTYVSLLSACSSAEDVGLGRVL 282
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H +V + NV V N LV Y KC A+ VFD + ++ +SW +++ YV+
Sbjct: 283 HKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLV 342
Query: 194 ENGCQMF---LTARREG----VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
C +F L + G V+P ++L+ACA ++ LE G+ V A + +
Sbjct: 343 AEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSD 402
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSF--EE 303
VG+A+V++YGKCG I++A F+ + R ++ WNA+I YA G + AL F E
Sbjct: 403 KAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME 462
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY-GIKPGAEHYACVVDLLG 362
M +R P+ + V +L ACS G ++G F SMT +Y + +H+ CV DLLG
Sbjct: 463 MEGVR----PDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 518
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R G + A E ++++P++P W +LL ACR + + + A+ L +L+P + +V
Sbjct: 519 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 578
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A +W VRK M + G+KK G S I + +H F D +H RN EI+
Sbjct: 579 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 638
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L KL +MK GY+PDT L+ V+E+EK + HSE++A+A GLI+ P G P+R+TKN
Sbjct: 639 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 698
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCH+A K IS I GR+++VRD RFH F DG CSC DYW
Sbjct: 699 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 196/408 (48%), Gaps = 16/408 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR++ + P+ TF + G ++H + + S D V + +MY K G
Sbjct: 49 MRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGS 108
Query: 61 KDDADKMFDEMPE-RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++F +M RN+ +W+ L G A+ F + G + L+
Sbjct: 109 LSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILS 168
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--KND 177
ACS +L+Q GR +H + SGF+ + V N ++ YG+C V A+ VFD + + ++
Sbjct: 169 ACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDV 228
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW ML YV N ++ Q++ +R + P S+LSAC+ + LGR +H
Sbjct: 229 VSWNIMLSTYVHNDRGKDAIQLY---QRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQ 285
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
V +E N+ VG+ALV MY KCGS +A F+KM +R+++ W II Y + A
Sbjct: 286 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEA 345
Query: 298 LSSFEEM-------TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
F++M +S R + P+ + V +L+AC+ A+E+G K+ G+
Sbjct: 346 CHLFQQMLELEKNGSSQRVK--PDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSD 402
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
VV+L G+ G ++ A I + RP + +W A++ +G+
Sbjct: 403 KAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQ 450
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 10/342 (2%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY+ DA FD + +RNL +W ++ + G+ K + A +R+ G PD +T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI- 172
F L +C D L+ G ++H +V S + + V N L++ Y KC + AK VF +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+N +SW M + + + F G++ + ++LSAC+ A ++ GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGYAH 290
+H+ + E + V +A++ MYG+CG++++A F+ M E R++V WN ++ Y H
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
A+ ++ M + P+ VT V +LSACS A V G ++ + + ++
Sbjct: 241 NDRGKDAIQLYQRM-----QLRPDKVTYVSLLSACSSAEDVGLG-RVLHKQIVNDELEKN 294
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+V + + G A + +M R IS W +++A
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISA 335
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 157/356 (44%), Gaps = 15/356 (4%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
+R + P+ T+ L A S+ G+ LH + +V VG + MY+K G
Sbjct: 252 QRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSH 311
Query: 62 DDADKMFDEMPERNLATWNAYISNAV---LGGRPKNAIDAFINLRRTGG----EPDLITF 114
+A +FD+M +R++ +W IS V L + + L + G +PD + F
Sbjct: 312 TEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAF 371
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
LNAC+D S L+ G+ + G + +V +V+ YGKC E+ A+ +FD +
Sbjct: 372 VTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCS 431
Query: 175 KNDVS-WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+ DV W +M+ VY Q + ++F EGV P F S+L AC+ + G+S
Sbjct: 432 RPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKS 491
Query: 234 VHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAH 290
V I + D+ G+ G +++AE K+P + + V W +++ A
Sbjct: 492 YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLA--AC 549
Query: 291 QGHADMALSSFEEMTSMRCEA--VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ H D+ + +R E YV L + + + AV K K +K
Sbjct: 550 RNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVK 605
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 331/589 (56%), Gaps = 9/589 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA +K ++ + FV + DMY+ A
Sbjct: 269 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 328
Query: 65 DKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
++FD +P+ + L WNA I G + A+ F + G P T + L AC
Sbjct: 329 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 388
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++V+ G GN V N L+D Y + + +A+ +F + + VSW
Sbjct: 389 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 448
Query: 182 SMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+++ V + Q+ ++ GV P + ++L CA +A G+ +H A
Sbjct: 449 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 508
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ ++ ++ VGSALVDMY KCG + + F+++P RN + WN +I Y G A
Sbjct: 509 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 568
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ MT+ EA PN VT + L+ACS +G V++G+++F++M +G++P + ACVV
Sbjct: 569 VLFDRMTA-SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 627
Query: 359 DLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
D+LGRAG +D AY ++ M +S W +L ACR++ LG IA + L +L+P ++
Sbjct: 628 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEA 687
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
++VLL N+++A G+W A VR M+ G+ K GCSWI V IH F A +++H +
Sbjct: 688 SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASE 747
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ A + L EM A GY PDT+ L+D+++ +K + HSEK+A+AFGL+ PG I
Sbjct: 748 EVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATI 807
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH A KF+S +VGRE+++RD RFH F +G CSC DYW
Sbjct: 808 RVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 22/409 (5%)
Query: 9 NDFTFPCLFKASSALHIPVT------GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGL 60
FT + +A S H+P G++ HA ALK+G +H F + MY++ GL
Sbjct: 163 TSFTLVSVLRAVS--HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 220
Query: 61 KDDADKMF-DEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
DA ++F P R ++ TWN +S V G A+ ++ G PD +TF + L
Sbjct: 221 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 280
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--K 175
ACS LL +GR++H ++++ N V + LVD Y +VG A+ VFD + D K
Sbjct: 281 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 340
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSV 234
W +M+ Y Q +E ++F E G P + ++SVL ACAR +V
Sbjct: 341 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 400
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK + GN FV +AL+DMY + G A F + ++V WN +I G QGH
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460
Query: 295 DMALSSFEEMTSM-RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A EM + VPN +TL+ +L C+ A +G +I + +++ +
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAV 519
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ +VD+ + G + + + +P R TI+ W L+ A YG LG
Sbjct: 520 GSALVDMYAKCGCLALSRAVFDRLPRRNTIT-WNVLIMA---YGMHGLG 564
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 331/589 (56%), Gaps = 9/589 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA +K ++ + FV + DMY+ A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326
Query: 65 DKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
++FD +P+ + L WNA I G + A+ F + G P T + L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++V+ G GN V N L+D Y + + +A+ +F + + VSW
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 446
Query: 182 SMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+++ V + Q+ ++ GV P + ++L CA +A G+ +H A
Sbjct: 447 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ ++ ++ VGSALVDMY KCG + + F+++P RN + WN +I Y G A
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ MT+ EA PN VT + L+ACS +G V++G+++F++M +G++P + ACVV
Sbjct: 567 VLFDRMTA-SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625
Query: 359 DLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
D+LGRAG +D AY ++ M +S W +L ACR++ LG IA + L +L+P ++
Sbjct: 626 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEA 685
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
++VLL N+++A G+W A VR M+ G+ K GCSWI V IH F A +++H +
Sbjct: 686 SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASE 745
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ A + L EM A GY PDT+ L+D+++ +K + HSEK+A+AFGL+ PG I
Sbjct: 746 EVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATI 805
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH A KF+S +VGRE+++RD RFH F +G CSC DYW
Sbjct: 806 RVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 22/409 (5%)
Query: 9 NDFTFPCLFKASSALHIPVT------GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGL 60
FT + +A S H+P G++ HA ALK+G +H F + MY++ GL
Sbjct: 161 TSFTLVSVLRAVS--HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 218
Query: 61 KDDADKMF-DEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
DA ++F P R ++ TWN +S V G A+ ++ G PD +TF + L
Sbjct: 219 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 278
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--K 175
ACS LL +GR++H ++++ N V + LVD Y +VG A+ VFD + D K
Sbjct: 279 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 338
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSV 234
W +M+ Y Q +E ++F E G P + ++SVL ACAR +V
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK + GN FV +AL+DMY + G A F + ++V WN +I G QGH
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458
Query: 295 DMALSSFEEMTSM-RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A EM + VPN +TL+ +L C+ A +G +I + +++ +
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAV 517
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ +VD+ + G + + + +P R TI+ W L+ A YG LG
Sbjct: 518 GSALVDMYAKCGCLALSRAVFDRLPRRNTIT-WNVLIMA---YGMHGLG 562
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 331/589 (56%), Gaps = 9/589 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA +K ++ + FV + DMY+ A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326
Query: 65 DKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
++FD +P+ + L WNA I G + A+ F + G P T + L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++V+ G GN V N L+D Y + + +A+ +F + + VSW
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 446
Query: 182 SMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+++ V + Q+ ++ GV P + ++L CA +A G+ +H A
Sbjct: 447 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ ++ ++ VGSALVDMY KCG + + F+++P RN + WN +I Y G A
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ MT+ EA PN VT + L+ACS +G V++G+++F++M +G++P + ACVV
Sbjct: 567 VLFDRMTA-SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625
Query: 359 DLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
D+LGRAG +D AY ++ M +S W +L ACR++ LG IA + L +L+P ++
Sbjct: 626 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEA 685
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
++VLL N+++A G+W A VR M+ G+ K GCSWI V IH F A +++H +
Sbjct: 686 SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASE 745
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ A + L EM A GY PDT+ L+D+++ +K + HSEK+A+AFGL+ PG I
Sbjct: 746 EVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATI 805
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH A KF+S +VGRE+++RD RFH F +G CSC DYW
Sbjct: 806 RVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 22/409 (5%)
Query: 9 NDFTFPCLFKASSALHIPVT------GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGL 60
FT + +A S H+P G++ HA ALK+G +H F + MY++ GL
Sbjct: 161 TSFTLVSVLRAVS--HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 218
Query: 61 KDDADKMF-DEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
DA ++F P R ++ TWN +S V G A+ ++ G PD +TF + L
Sbjct: 219 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 278
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--K 175
ACS LL +GR++H ++++ N V + LVD Y +VG A+ VFD + D K
Sbjct: 279 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 338
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSV 234
W +M+ Y Q +E ++F E G P + ++SVL ACAR +V
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK + GN FV +AL+DMY + G A F + ++V WN +I G QGH
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458
Query: 295 DMALSSFEEMTSM-RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A EM + VPN +TL+ +L C+ A +G +I + +++ +
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAV 517
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ +VD+ + G + + + +P R TI+ W L+ A YG LG
Sbjct: 518 GSALVDMYAKCGCLALSRAVFDRLPRRNTIT-WNVLIMA---YGMHGLG 562
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/633 (36%), Positives = 336/633 (53%), Gaps = 49/633 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + PN +T + K S + GK +HA L++G DV +G S D+Y K +
Sbjct: 381 MQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR----------------- 103
+ A+++F+ M E ++ +WN I + G + ++D F L
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500
Query: 104 --------------RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G E +TF L S S ++LGRQLHG +++ GFD + +
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIR 560
Query: 150 NGLVDFYGKCNEVGLAKVVFDGI----IDKND------------VSWCSMLVVYVQNYEE 193
+ LV+ Y KC + A ++ + + K + VSW SM+ YV N +
Sbjct: 561 SSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKY 620
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
E+G + F RE V +++++SACA LE GR VHA K + +VGS+L
Sbjct: 621 EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSL 680
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+DMY K GS+ DA + F + E N+V W ++I GYA G A+ FEEM + +P
Sbjct: 681 IDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEM--LNQGIIP 738
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
N VT + VL+ACS AG +E+G + F M Y I PG EH +VDL GRAG + +
Sbjct: 739 NEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNF 798
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRW 433
I + + SVW + L++CR++ E+G+ ++ L ++ P+D G +VLLSNM A+ RW
Sbjct: 799 IFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRW 858
Query: 434 EEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA 493
+EA VR M G+KK G SWI +K++IH F D SH ++ EI + L L +K
Sbjct: 859 DEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEI 918
Query: 494 GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAF 553
GY D + DVEEE+ + HHSEK+A+ FG+I PIRI KNLRIC DCH+
Sbjct: 919 GYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFI 978
Query: 554 KFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K+ S ++ RE+IVRD +RFH F G CSC DYW
Sbjct: 979 KYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 204/445 (45%), Gaps = 57/445 (12%)
Query: 7 SPNDFTFPCLFKASSALH------IPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
S + + +P L+ S +L+ P LHAL +K+G + + +Y+K+
Sbjct: 280 SISSYFYPPLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNN 339
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A K+FDE+P+RN TW IS G + + F ++ G P+ T + L
Sbjct: 340 MAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKC 399
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS + LQLG+ +H +++R+G D +V + N ++D Y KC A+ +F+ + + + VSW
Sbjct: 400 CSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSW 459
Query: 181 CSMLVVYVQNYEEENGCQMFLTARRE-------------------------------GVE 209
M+ Y++ + E MF + G E
Sbjct: 460 NIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTE 519
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
S L + ++ +ELGR +H + +K + + F+ S+LV+MY KCG + A I
Sbjct: 520 FSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASII 579
Query: 270 FN----------------KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
K P+ +V W +++ GY G + L +F M +R V
Sbjct: 580 LRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLM--VRELVVV 637
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
+ T+ ++SAC+ AG +E G + ++ K G + A + ++D+ ++G +D A+ +
Sbjct: 638 DIRTVTTIISACANAGILEFGRHV-HAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMV 696
Query: 374 IKEMPMRPTISVWGALLNACRVYGK 398
++ P I +W ++++ ++G+
Sbjct: 697 FRQ-SNEPNIVMWTSMISGYALHGQ 720
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LH V++G ++ N L+ Y K N + A+ +FD I +N +W ++ + +
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
E +F + +G P + +SSVL C+ L+LG+ VHA ++ ++ ++ +G++
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF----------- 301
++D+Y KC + AE F M E ++V WN +IG Y G + +L F
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 302 -----------------EEMTSM-RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
E++ M C + VT L S VE G ++ + M L
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQL-HGMVL 549
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM---------------RPTISVWGA 388
K+G + +V++ + G +D+A I++++P+ + I WG+
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609
Query: 389 LLNACRVYGKPELG 402
+++ GK E G
Sbjct: 610 MVSGYVWNGKYEDG 623
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 321/593 (54%), Gaps = 19/593 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT A S+L GKQ HA +K HD +G + +YSK G D + K
Sbjct: 79 PSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKA 138
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F E E+++ +W IS GR + FI + EP+ T + L+ CS
Sbjct: 139 FRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSS 198
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG Q+H + G + N+ + N LV Y KC + AK +F+ + KN ++W +M+ +
Sbjct: 199 DLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGH 258
Query: 188 VQNYE--------EENGCQ---MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
Q + ++ G + M+L R G +P F +SS+L+ C+R+A LE G +HA
Sbjct: 259 AQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHA 318
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K+ ++ VG+ALVDMY KCGSI+ A AF M R L+ W ++I +A G +
Sbjct: 319 QTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQH 378
Query: 297 ALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL FE+M R PN +T V VL+ACS AG V++ ++ F M +Y IKP +HY
Sbjct: 379 ALQLFEDM---RLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYG 435
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
C+VD+ R G +D A+++IK M + P +W L+ CR +G ELG AA+ L KL P
Sbjct: 436 CLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPR 495
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+ +V+L NM+ + RWE+ +VR+ MK+ + K S IS+K +H F+ + H
Sbjct: 496 STETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNH 555
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYD----VEEEEKMTEVGHHSEKIALAFGLIAI 531
N E+ +L L + K+ GY N + D EE+ + +HSEK+A+ FGL+
Sbjct: 556 NAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVYHSEKLAVTFGLLNT 615
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
P G PIR+ K++ +C DCH K +S R +I++D R H+F +G CSC+D
Sbjct: 616 PIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVNGQCSCAD 668
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 197/380 (51%), Gaps = 15/380 (3%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +K+G + FV ++Y+K G+ +A K+FD +P RN+ W ++ V +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
P+ A++ F ++ +G P T LNACS + LG+Q H F+++ + S+ N
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L Y K + + F +K+ +SW +++ N G ++F+ E VEP
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
DF ++SVLS C+ I +LG VH+++ K E N+ + ++LV +Y KCG I +A+ FN
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS-----------MRCEAVPNYVTLVC 320
+M +NL+ WNA+I G+A D+A +F + R P+ TL
Sbjct: 242 RMEYKNLITWNAMIAGHAQA--MDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
+L+ CSR A+E+G +I ++ T+K G +VD+ + G ++RA + +M R
Sbjct: 300 ILTVCSRLAALEQGEQI-HAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 381 PTISVWGALLNACRVYGKPE 400
IS W +++ + +G+ +
Sbjct: 359 TLIS-WTSMITSFARHGQSQ 377
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 13/340 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PNDFT + S + G Q+H+L+ K G ++ + S +Y K G
Sbjct: 173 MLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGC 232
Query: 61 KDDADKMFDEMPERNLATWNAYIS-----------NAVLGGRPKNAIDAFINLRRTGGEP 109
D+A +F+ M +NL TWNA I+ N A+ ++ L R+G +P
Sbjct: 233 IDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKP 292
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
DL T + L CS + L+ G Q+H ++SGF +V V LVD Y KC + A+ F
Sbjct: 293 DLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAF 352
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
+ + +SW SM+ + ++ + ++ Q+F R G P VL+AC+ ++
Sbjct: 353 LDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVD 412
Query: 230 LGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+ K ++ + LVDM+ + G + +A +M E N W +I G
Sbjct: 413 EALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
+ G+ ++ + E++ ++ + YV L+ + + R
Sbjct: 473 CRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAER 512
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/583 (37%), Positives = 306/583 (52%), Gaps = 40/583 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ +TFPC+ KA S V G+++H A K G +FVG MY K G +A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+ DEM R++ +WN+ + R +A++ + D T + L A S+ +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
V K +F + K+ VSW M+
Sbjct: 256 ---------------------------------TENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
VY++N +++ +G EP I+SVL AC + L LG+ +H + +
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMT 305
N+ + +AL+DMY KCG ++ A F M R++V W A+I Y G A++ F ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 306 SMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
VP+ + V L+ACS AG +E+G F MT Y I P EH AC+VDLLGRAG
Sbjct: 403 D--SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSN 425
V AY I++M M P VWGALL ACRV+ ++G +AAD LF+L P SG +VLLSN
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 426 MFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTK 485
++A GRWEE +R MK G+KK G S + V IH F D SH ++ EI L
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 486 LREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP-----PGVPIRIT 540
L ++MK GY+PD+ AL+DVEEE+K T + HSEK+A+ F L+ IRIT
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
KNLRICGDCH A K IS I RE+I+RD NRFH F G CSC+
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
R +H ++ N S+ L+ Y +V A+ VFD I ++N + M+ YV N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
G ++F T V P + VL AC+ + +GR +H A K + +FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMR 308
+ LV MYGKCG + +A + ++M R++V WN+++ GYA D AL EM S++
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 334/591 (56%), Gaps = 15/591 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T + A S+L GKQ+HA +K D +G S YSK + A K
Sbjct: 163 PSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKA 222
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + E+++ +W + IS+ G+ ++ F+++ G +P+ T + L+AC L
Sbjct: 223 FKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTL 282
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG Q+H ++ G+ ++ + N ++ Y KC + A+ +F+G+ N V+W +M+ +
Sbjct: 283 DLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGH 342
Query: 188 VQ--NYEEEN---------GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ + E++ MF R G++P F SSVLS C+ + LE G +H
Sbjct: 343 AKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHG 402
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K+ V ++ VG+ALV MY KCGSI A AF +MP R ++ W ++I G+A G +
Sbjct: 403 QIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQ 462
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL FE+M + + PN VT V VLSACS AG ++ + F M +Y IKP +H+AC
Sbjct: 463 ALQLFEDMRLVGIK--PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC 520
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
++D+ R G V+ A++++ +M P ++W L+ CR +GK +LG AA+ L KL P D
Sbjct: 521 LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKD 580
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+V L NM + GRW++ VRK MK+ + K SWIS+K +++ F+ D SH ++
Sbjct: 581 VETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQS 640
Query: 477 TEIQAMLTKLREEMKAAGYIP--DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
E+ +L + E+KA GY P D + EE ++ HSEK+A+AFGL+ +P
Sbjct: 641 LEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTA 700
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PIR+ K++ +C DCH+ +FIS + GRE+++RD+ + H+F +GYCSC Y
Sbjct: 701 TPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 16/400 (4%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ + FP L + ++ + +H +K+G D+FV ++YSK G+ + A K+F
Sbjct: 64 SSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 122
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D +P RN+ W ++ V P A+ FI + G P T LNACS ++
Sbjct: 123 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 182
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+Q+H +L++ D + S+ N L FY K + A F I +K+ +SW S++
Sbjct: 183 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 242
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
N + F+ +G++P ++ ++SVLSAC + L+LG +H++++K +I
Sbjct: 243 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 302
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADMA 297
+ ++++ +Y KCG + +A+ F M NLV WNA+I G+A A
Sbjct: 303 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F+++ R P+ T VLS CS A+E+G +I + +K G+ +
Sbjct: 363 LAMFQKL--YRSGMKPDLFTFSSVLSVCSNLVALEQGEQI-HGQIIKSGVLADVVVGTAL 419
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V + + G +D+A + EMP R IS W +++ +G
Sbjct: 420 VSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHG 458
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 15/351 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN++T + A + G Q+H+L++K G + + S +Y K G
Sbjct: 257 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 316
Query: 61 KDDADKMFDEMPERNLATWNAYIS-----------NAVLGGRPKNAIDAFINLRRTGGEP 109
+A K+F+ M NL TWNA I+ + A+ F L R+G +P
Sbjct: 317 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 376
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
DL TF + L+ CS+ L+ G Q+HG +++SG +V V LV Y KC + A F
Sbjct: 377 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAF 436
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL- 228
+ + +SW SM+ + ++ + Q+F R G++P VLSAC+ AGL
Sbjct: 437 LEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH-AGLA 495
Query: 229 -ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIG 286
E + + ++ + + L+DMY + G +++A +KM E N W+ +I
Sbjct: 496 DEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA 555
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
G G +D+ + E++ ++ + V YV+L+ + + R V K K+
Sbjct: 556 GCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 606
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 331/591 (56%), Gaps = 15/591 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++T + A S+L GKQ+HA +K D +G S YSK + A K
Sbjct: 157 PSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKA 216
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F + E+++ +W + IS+ G+ ++ F+++ G +P+ T + L+AC L
Sbjct: 217 FKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTL 276
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG Q+H ++ G+ ++ + N ++ Y KC + A+ +F+G+ N V+W +M+ +
Sbjct: 277 DLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGH 336
Query: 188 VQ-----------NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ + MF R G++P F SSVLS C+ + LE G +H
Sbjct: 337 AKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHG 396
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K+ V ++ VG+ALV MY KCGSI A AF +MP R ++ W ++I G+A G +
Sbjct: 397 QIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQ 456
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL FE+M + + PN VT V VLSACS AG ++ + F M +Y IKP +H+AC
Sbjct: 457 ALQLFEDMRLVGIK--PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC 514
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
++D+ R G V+ A++++ +M P ++W L+ CR +GK +LG AA+ L KL P D
Sbjct: 515 LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKD 574
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
+V L NM + GRW++ VRK MK+ + K SWIS+K +++ F+ D SH ++
Sbjct: 575 VETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQS 634
Query: 477 TEIQAMLTKLREEMKAAGYIP--DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
E+ +L + E+KA GY P D + EE ++ HSEK+A+AFGL+ +P
Sbjct: 635 LEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTA 694
Query: 535 VPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PIR+ K++ +C DCH+ +FIS + GRE+++RD+ + H+F +GYCSC Y
Sbjct: 695 TPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 16/400 (4%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+ + FP L + ++ + +H +K+G D+FV ++YSK G+ + A K+F
Sbjct: 58 SSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 116
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D +P RN+ W ++ V P A+ FI + G P T LNACS ++
Sbjct: 117 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 176
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+Q+H +L++ D + S+ N L FY K + A F I +K+ +SW S++
Sbjct: 177 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 236
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
N + F+ +G++P ++ ++SVLSAC + L+LG +H++++K +I
Sbjct: 237 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 296
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADMA 297
+ ++++ +Y KCG + +A+ F M NLV WNA+I G+A A
Sbjct: 297 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F+++ R P+ T VLS CS A+E+G +I + +K G+ +
Sbjct: 357 LAMFQKL--YRSGMKPDLFTFSSVLSVCSNLVALEQGEQI-HGQIIKSGVLADVVVGTAL 413
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
V + + G +D+A + EMP R IS W +++ +G
Sbjct: 414 VSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHG 452
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 15/351 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + PN++T + A + G Q+H+L++K G + + S +Y K G
Sbjct: 251 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 310
Query: 61 KDDADKMFDEMPERNLATWNAYIS-----------NAVLGGRPKNAIDAFINLRRTGGEP 109
+A K+F+ M NL TWNA I+ + A+ F L R+G +P
Sbjct: 311 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 370
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
DL TF + L+ CS+ L+ G Q+HG +++SG +V V LV Y KC + A F
Sbjct: 371 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAF 430
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL- 228
+ + +SW SM+ + ++ + Q+F R G++P VLSAC+ AGL
Sbjct: 431 LEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH-AGLA 489
Query: 229 -ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIG 286
E + + ++ + + L+DMY + G +++A +KM E N W+ +I
Sbjct: 490 DEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA 549
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
G G +D+ + E++ ++ + V YV+L+ + + R V K K+
Sbjct: 550 GCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 600
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/599 (36%), Positives = 331/599 (55%), Gaps = 45/599 (7%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS-- 84
T K LHA +K G + + + ++Y K G A ++FDEMP R+ W + ++
Sbjct: 20 TTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL 79
Query: 85 -NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
A L G K +G PD F A + AC++ + GRQ+H + S +
Sbjct: 80 NQANLSG--KTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA 137
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--- 200
+ V + LVD Y KC + AK VFD I KN +SW +M+ Y ++ +E ++F
Sbjct: 138 NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Query: 201 ----------------------------LTARREGVEPKD-FMISSVLSACARIAGLELG 231
RRE V+ D ++SS++ ACA +A G
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAG 257
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R VH + + + +F+ +AL+DMY KC + A+ F++M R++V W ++I G A
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A+ AL+ +++M S + PN VT V ++ ACS G VEKG ++F SMT YGI+P
Sbjct: 318 GQAEKALALYDDMVSHGVK--PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL-- 409
+HY C++DLLGR+GL+D A +I MP P W ALL+AC+ G+ ++G AD+L
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 410 -FKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
FKL D ++LLSN++A+ W + R+++ ++ ++K G S + V+ +F A
Sbjct: 436 SFKL--KDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493
Query: 469 KDTSHERNTEIQAMLTKLREEMKAA-GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
+TSH +I +L KL EEM+ GY+PDT++ L+D++E+EK + HSE+ A+A+G
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
L+ PG PIRI KNLR+CGDCH K IS I RE+IVRD R+H F G CSC+D+W
Sbjct: 554 LLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 169/374 (45%), Gaps = 35/374 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+DF F L KA + L G+Q+H + S +D V S DMY+K GL + A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 66 KMFDE-------------------------------MPERNLATWNAYISNAVLGGRPKN 94
+FD +P +NL +W A IS V G+
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 95 AIDAFINLRRTGGEP-DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
A F +RR + D + + + AC++ + GRQ+HG ++ GFD V + N L+
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
D Y KC++V AK +F + ++ VSW S++V Q+ + E ++ GV+P +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
++ AC+ + +E GR + K + ++ + L+D+ G+ G + +AE +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 273 MP-ERNLVCWNAIIGGYAHQGHADMALSSFEEM-TSMRCEAVPNYVTLVCVLSACSRAGA 330
MP + W A++ QG M + + + +S + + Y+ L + ++ S G
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 331 VEKGMKIFYSMTLK 344
V + + M ++
Sbjct: 461 VSEARRKLGEMEVR 474
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 35/332 (10%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L C+ L + LH +V+ G + N LV+ YGKC A VFD + ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 178 VSWCSMLVVYVQ-NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
++W S+L Q N + G+ P DF+ S+++ ACA + ++ GR VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ + + V S+LVDMY KCG + A+ F+ + +N + W A++ GYA G +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 297 A----------------------------LSSFEEMTSMRCEAVP--NYVTLVCVLSACS 326
A L +F T MR E V + + L ++ AC+
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
A G ++ + + + G ++D+ + V A +I M R +S W
Sbjct: 250 NLAASIAGRQV-HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS-W 307
Query: 387 GALLNACRVYGKPELGRIAADNLFK--LDPND 416
+L+ +G+ E D++ + PN+
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 320/590 (54%), Gaps = 45/590 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + ISP+ TFP + K+++AL G+ LH LK G D FV S DMY K
Sbjct: 131 MLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEE 190
Query: 61 KDDADKMFDEMPER----NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
A K+FDE PE ++ WN I G A + F ++ +
Sbjct: 191 LGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKK----------- 239
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+ N L++ + K ++G AK +F + +KN
Sbjct: 240 ----------------------------DTGSWNSLINGFMKMGDMGRAKELFVKMPEKN 271
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VSW +M+ + QN + E + F EG P D+ I S LSACA+I L+ G +H
Sbjct: 272 VVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHN 331
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ N+ +G+ALVDMY KCG+I+ AE F++ E+ L+ W+ +I G+A GH
Sbjct: 332 YLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRK 391
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL FE M + P+ V + VL+ACS +G V +G+K F +M Y I+P +HY
Sbjct: 392 ALQYFEWMKFTGTK--PDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTL 449
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVD+LGRAG +D A + I+ MP+ P VWGAL ACR + E+ +A+ L +L+P
Sbjct: 450 VVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKH 509
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G++V LSN +A+ GRW++A+ VR M+D G K G S+I V +++H F A D +H R
Sbjct: 510 PGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRA 569
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI + L ++ + GY + L+++EEEEK +G+HSEK+ALAFG+++ PG
Sbjct: 570 VEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTT 629
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+C DCHS K+ S + RE+I+RD RFH F DG CSC DYW
Sbjct: 630 VRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 171/414 (41%), Gaps = 80/414 (19%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
D A +F +N +NA I R +++I F+ + + PD +TF L +
Sbjct: 91 DYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSA 150
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ S +GR LH +++ G + + V LVD Y K E+G A VFD
Sbjct: 151 AALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDE---------- 200
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL-ELGRSVHAVAV- 239
P+ SVL I G +G V A +
Sbjct: 201 ---------------------------SPESVKNGSVLIWNVLIHGYCRMGDLVKATELF 233
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + + ++L++ + K G + A+ F KMPE+N+V W ++ G++ G + AL
Sbjct: 234 DSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALE 293
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+F M + A PN T+V LSAC++ GA++ G++I ++ G K +VD
Sbjct: 294 TFFCM--LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLS-GNGFKLNLVIGTALVD 350
Query: 360 LLGRAGLVDRAYEIIKEMPMRP----TISVWG---------------------------- 387
+ + G ++ A ++ E + ++ +WG
Sbjct: 351 MYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVV 410
Query: 388 --ALLNACRVYGKPELGRIAADNL---FKLDPNDSGNHVLLSNMFAATGRWEEA 436
A+LNAC G+ G DN+ + ++P+ ++ L+ +M GR +EA
Sbjct: 411 FLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPS-MKHYTLVVDMLGRAGRLDEA 463
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 142/332 (42%), Gaps = 31/332 (9%)
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
RQ+HG L R + V + N V A +F KN + +++ +N
Sbjct: 59 RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E+ F+ + + P VL + A ++ +GR++H +K +E + FV
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVR 178
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPER----NLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+LVDMY K + A F++ PE +++ WN +I GY G A F+ S
Sbjct: 179 VSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFD---S 235
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
M + ++ +L+ + + G + + ++F M K + + +V+ + G
Sbjct: 236 MPKKDTGSWNSLI---NGFMKMGDMGRAKELFVKMPEKNVVS-----WTTMVNGFSQNGD 287
Query: 367 VDRAYEI---IKEMPMRPTISVWGALLNACRVYGKPELG-RI---AADNLFKLDPNDSGN 419
++A E + E RP + L+AC G + G RI + N FKL N
Sbjct: 288 PEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL------N 341
Query: 420 HVL---LSNMFAATGRWEEADLVRKEMKDVGI 448
V+ L +M+A G E A+ V E K+ G+
Sbjct: 342 LVIGTALVDMYAKCGNIEHAEKVFHETKEKGL 373
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 344/638 (53%), Gaps = 71/638 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIP---VTGKQLHALALKSGQIHDV-FVGCSAFDMYS 56
MRR + P+ FTF LFK SS+ P + LHA L++ FV S MY
Sbjct: 94 MRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYI 153
Query: 57 KTGLKDDADKMFDEM-------------------------------PERNLATWNAYISN 85
+ GL DA + FDE+ P R++ +W + I+
Sbjct: 154 RLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAA 213
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
R + A+ F + G PD +T A L+AC+ L+LGR LH + G +
Sbjct: 214 YSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTS 273
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDG------------IID------------------- 174
++ L+D Y KC + G A+ VFD IID
Sbjct: 274 ENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEME 333
Query: 175 -KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ +++ SM+ Y+ + + +F++ RR + +F + ++L+ACA + L+ GR+
Sbjct: 334 VRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRA 393
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+HA + VE +I++G+AL+DMY KCG + +A I F +M +R++ W A+I G A G
Sbjct: 394 LHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGM 453
Query: 294 ADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
AL F +M RC+ PN V+ + VL+ACS + + +G F M + Y I P E
Sbjct: 454 GKAALEHFYQM---RCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIE 510
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C++DLLGR+GL+D A +++K MP++P +W ++L+ACRV+ +L + AA++L KL
Sbjct: 511 HYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKL 570
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+P++ G +V L N++ + +WE A +R M++ +KK AG S I+V ++H F D S
Sbjct: 571 EPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKS 630
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R EI AML ++ +K+ GY P T+ DV+EEEK + HSEK+A+AFGLI +
Sbjct: 631 HPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLA 690
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
P +P+ I KNLR+C DCHSA K IS + RE+IVRD +
Sbjct: 691 PNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRS 728
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 169/418 (40%), Gaps = 78/418 (18%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +FD MP A + + G P F +RR G PD TF FL CS
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTF-HFLFKCSS 114
Query: 124 CSL----LQLGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
S L L LH +R+ V N L+ Y + A+ FD I K+ V
Sbjct: 115 SSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAV 174
Query: 179 -------------------------------SWCSMLVVYVQNYEEENGCQMFLTARREG 207
SW S++ Y + F T G
Sbjct: 175 AWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG 234
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+ P + + +VLSACA++ LELGRS+H + + + + + AL+DMY KCG A+
Sbjct: 235 IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQ 294
Query: 268 IAFNKM---PERNLVCWNAIIGGYAHQGHADMALSSFEEM-------------------- 304
F+ + P WNAII GY GH D+A S F+EM
Sbjct: 295 QVFDALGRGPRPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQ 352
Query: 305 --------TSMRCE--AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
SMR V N+ T+V +L+AC+ GA+++G + ++ + ++
Sbjct: 353 LREALLLFMSMRRHDLRVDNF-TVVNLLTACASLGALQQG-RALHACIEQRLVEADIYLG 410
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
++D+ + G VD A + + M R + W A++ G +G+ A ++ +++
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMGKR-DVHTWTAMIAGLAFNG---MGKAALEHFYQM 464
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 320/560 (57%), Gaps = 7/560 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---ADKMFDEMPERNLATWNAYISNAV 87
Q+ A A+KS Q DV + +++ + A +FD M E ++ +N+
Sbjct: 49 QIQAYAIKSHQ-EDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYS 107
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P + F+ + PD TF + L AC+ L+ GRQLH ++ G D NV
Sbjct: 108 RSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVY 167
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VC L++ Y +C +V A+ VFD I++ V + +M+ Y + +F + +
Sbjct: 168 VCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKN 227
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++P + + SVLS+CA + L+LG+ +H A K + V +AL+DM+ KCGS+ DA
Sbjct: 228 LKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAV 287
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F M ++ W+A+I YA+ G A+ ++ FE M S + P+ +T + +L+ACS
Sbjct: 288 SIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQ--PDEITFLGLLNACSH 345
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G VE+G + F M ++GI P +HY +VDLLGRAG ++ AYE I ++P+ PT +W
Sbjct: 346 TGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWR 405
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC + EL ++ + +LD + G++V+LSN++A +WE D +RK MKD
Sbjct: 406 ILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRK 465
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-DV 506
K GCS I V N +H F + D T++ L ++ +E+K AGY+PDT+ ++ D+
Sbjct: 466 AVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHADM 525
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
++EK + +HSEK+A+AFGL+ PPG IR+ KNLR+C DCHSA K IS I GR+V++
Sbjct: 526 GDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVL 585
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD RFH F DG CSC D+W
Sbjct: 586 RDVQRFHHFEDGKCSCRDFW 605
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 163/337 (48%), Gaps = 10/337 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+++TFP L KA + G+QLH L++K G +V+V + +MY++ D A +
Sbjct: 129 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCV 188
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD + E + +NA I+ RP A+ F ++ +P+ IT + L++C+ L
Sbjct: 189 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSL 248
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
LG+ +H + + GF V V L+D + KC + A +F+ + K+ +W +M+V Y
Sbjct: 249 DLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAY 308
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-----VHAVAVKAC 242
+ + EN MF R E V+P + +L+AC+ +E GR VH +
Sbjct: 309 ANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPS 368
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF 301
++ GS +VD+ G+ G ++DA +K+P + W ++ + + ++A
Sbjct: 369 IK---HYGS-MVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVS 424
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
E + + +YV L + + + AV+ K+
Sbjct: 425 ERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVM 461
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN+ T + + + L GK +H A K G V V + DM++K G
Sbjct: 223 MQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGS 282
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F+ M ++ W+A I G+ +N++ F +R +PD ITF LNA
Sbjct: 283 LDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNA 342
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS L++ GR+ ++V G ++ +VD G+ + A IDK +S
Sbjct: 343 CSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAY----EFIDKLPIS 398
Query: 180 WCSML 184
ML
Sbjct: 399 PTPML 403
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/563 (39%), Positives = 307/563 (54%), Gaps = 39/563 (6%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT--WNAYI 83
P +Q+HA +K+ + + + T A ++F + ++ T WN+ +
Sbjct: 74 PFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCL 133
Query: 84 SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
G P +AI F LR+ PD T + L AC + L GR LHG + + GF
Sbjct: 134 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 193
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
SW SM+ YVQ + + +F
Sbjct: 194 -----------------------------------SWTSMIAGYVQCGKAKEAIHLFAKM 218
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
GV+ + + +VL+ACA + L+LG +H + + + N+ + + L+DMY KCG +
Sbjct: 219 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 278
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
++A F +M ER +V W+A+IGG A G A+ AL F +M+ + E PN VT + +L
Sbjct: 279 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE--PNGVTFIGLLH 336
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS G + +G + F SMT YGI P EHY C+VDLL RAGL+ A+E I MPM+P
Sbjct: 337 ACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNG 396
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
VWGALL ACRV+ E+ A +L +LDP + G +V+LSN++A GRWE+ VRK M
Sbjct: 397 VVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFM 456
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
KD +KK G S I+V +H F A + SH +I +L EEM+ GY+P+T+ L
Sbjct: 457 KDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVL 516
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
D+EE EK+ V HSEK+AL FGL+ P PIRI KNLRIC DCHSAFK IS IV RE
Sbjct: 517 LDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNRE 576
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
++VRD NRFH F D CSC DYW
Sbjct: 577 IVVRDRNRFHCFNDNSCSCRDYW 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N+ T + A + L G ++H + + G +V + + DMY K G ++A K+F
Sbjct: 226 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 285
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER + +W+A I + GR + A+ F ++ + G EP+ +TF L+ACS L+
Sbjct: 286 EEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLIS 345
Query: 129 LGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSWCSML 184
GR+ + R G + +VD + + A + + + + N V W ++L
Sbjct: 346 EGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 403
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/596 (37%), Positives = 325/596 (54%), Gaps = 16/596 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ I PN+FTF KA L+ G Q+H LK G V VG S DMYSK G
Sbjct: 469 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG--GEPDLITFCAFL 118
++A+K+F + +R+L +WNA I+ V G A+D F ++ PD T + L
Sbjct: 529 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 588
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
ACS ++ G+Q+HGFLVRSGF + ++ LVD Y KC + A+ FD I +K
Sbjct: 589 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 648
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S+++ Y Q E +F + + F +SS++ A A L G+ + A
Sbjct: 649 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 708
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+AVK V +++VDMY KCG + +AE F +M ++++ W +I GY G
Sbjct: 709 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 768
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
++ F EM +R P+ V + VLSACS +G +++G ++F + +GIKP EHYAC
Sbjct: 769 SVRIFYEM--LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 826
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVDLLGRAG + A +I MP++P + +W LL+ CRV+G ELG+ L ++D +
Sbjct: 827 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 886
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
N+V++SN++ G W E R+ G+KK AG SW+ ++ +H F++ + SH
Sbjct: 887 PANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLT 946
Query: 477 TEIQAMLT----KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA-- 530
IQ L +LREE+ GY+ L+D+++E K + HSEK+A+ L
Sbjct: 947 PVIQETLKEAERRLREEL---GYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 1003
Query: 531 -IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
G IR+ KNLR+C DCH K +S I +VRD RFH F DG CSC DY
Sbjct: 1004 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 185/367 (50%), Gaps = 17/367 (4%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
DMY K A K+FD MPERN+ +W+A +S VL G K ++ F + R G P+
Sbjct: 420 DMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEF 479
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
TF L AC + L+ G Q+HGF ++ GF+ V V N LVD Y KC + A+ VF I
Sbjct: 480 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 539
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLEL 230
+D++ +SW +M+ +V F + ++ P +F ++S+L AC+ +
Sbjct: 540 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 599
Query: 231 GRSVHAVAVKA---CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
G+ +H V++ C GS LVD+Y KCG + A AF+++ E+ ++ W+++I G
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG 658
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
YA +G A+ F+ + + + + L ++ + + +G ++ L +
Sbjct: 659 YAQEGEFVEAMGLFKRLQELNSQI--DSFALSSIIGVFADFALLRQGKQM---QALAVKL 713
Query: 348 KPGAEHYA--CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G E VVD+ + GLVD A + EM ++ IS W ++ YGK LG+ +
Sbjct: 714 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITG---YGKHGLGKKS 769
Query: 406 ADNLFKL 412
+++
Sbjct: 770 VRIFYEM 776
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 4/248 (1%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
N+ N L+D Y KC E +A VFD + ++N VSW +++ +V N + + +F
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
R+G+ P +F S+ L AC + LE G +H +K E + VG++LVDMY KCG I
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+AE F ++ +R+L+ WNA+I G+ H G+ AL +F M + P+ TL +L A
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590
Query: 325 CSRAGAVEKGMKIFYSMTLKYGIK--PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
CS G + G +I + ++ G A +VDL + G + A + ++ +
Sbjct: 591 CSSTGMIYAGKQI-HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649
Query: 383 ISVWGALL 390
IS W +L+
Sbjct: 650 IS-WSSLI 656
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 331/589 (56%), Gaps = 9/589 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
+ P+ TF A S L + G+++HA +K ++ + FV + DMY+ A
Sbjct: 115 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 174
Query: 65 DKMFDEMPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
++FD +P+ + L WNA I G + A+ F + G P T + L AC
Sbjct: 175 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 234
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ +HG++V+ G GN V N L+D Y + + +A+ +F + + VSW
Sbjct: 235 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 294
Query: 182 SMLVVYVQNYEEENGCQMFLTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
+++ V + Q+ ++ GV P + ++L CA +A G+ +H A
Sbjct: 295 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 354
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
V+ ++ ++ VGSALVDMY KCG + + F+++P RN + WN +I Y G A
Sbjct: 355 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 414
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
F+ MT+ EA PN VT + L+ACS +G V++G+++F++M +G++P + ACVV
Sbjct: 415 VLFDRMTA-SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 473
Query: 359 DLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
D+LGRAG +D AY ++ M +S W +L ACR++ LG IA + L +L+P ++
Sbjct: 474 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEA 533
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
++VLL N+++A G+W A VR M+ G+ K GCSWI V IH F A +++H +
Sbjct: 534 SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASE 593
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
E+ A + L EM A GY PDT+ L+D+++ +K + HSEK+A+AFGL+ PG I
Sbjct: 594 EVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATI 653
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH A KF+S +VGRE+++RD RFH F +G CSC DYW
Sbjct: 654 RVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 22/409 (5%)
Query: 9 NDFTFPCLFKASSALHIPVT------GKQLHALALKSGQIH--DVFVGCSAFDMYSKTGL 60
FT + +A S H+P G++ HA ALK+G +H F + MY++ GL
Sbjct: 9 TSFTLVSVLRAVS--HLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 66
Query: 61 KDDADKMF-DEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
DA ++F P R ++ TWN +S V G A+ ++ G PD +TF + L
Sbjct: 67 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 126
Query: 119 NACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID--K 175
ACS LL +GR++H ++++ N V + LVD Y +VG A+ VFD + D K
Sbjct: 127 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 186
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSV 234
W +M+ Y Q +E ++F E G P + ++SVL ACAR +V
Sbjct: 187 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 246
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VK + GN FV +AL+DMY + G A F + ++V WN +I G QGH
Sbjct: 247 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 306
Query: 295 DMALSSFEEMTSM-RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A EM + VPN +TL+ +L C+ A +G +I + +++ +
Sbjct: 307 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI-HGYAVRHALDTDVAV 365
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ +VD+ + G + + + +P R TI+ W L+ A YG LG
Sbjct: 366 GSALVDMYAKCGCLALSRAVFDRLPRRNTIT-WNVLIMA---YGMHGLG 410
>gi|222618959|gb|EEE55091.1| hypothetical protein OsJ_02835 [Oryza sativa Japonica Group]
Length = 575
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 319/577 (55%), Gaps = 29/577 (5%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQI-----HDVFVGCSAFDMYSKTGLKDDADKMFDE 70
L S+A +P G+QLH LK+G + + Y++ L D+ F +
Sbjct: 22 LVALSAARALP-KGQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLCAFLD 80
Query: 71 MP-ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+P + A W++ IS+ G P A DAF + G +
Sbjct: 81 LPAPPSPAAWSSLISSFSQNGLPAAAFDAFRRMLAAG-------------------VPAT 121
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
R + + F G+V V + ++D Y KC + A+ +FD + +N VSW +++ Y
Sbjct: 122 DRNIPSAAKGTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYAD 181
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
++F A E V DF +S +L CA ELG VHA ++K + + FV
Sbjct: 182 AGMHSAAMEIFRLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFV 241
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
GS+LV +Y KCG ++ A F + PERNL WNA + A GH A F +M +
Sbjct: 242 GSSLVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGF 301
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN +T + +++ACS AG V++G K ++S+ +Y I+P AEHYA +VDLLGR G +
Sbjct: 302 R--PNSITFLSLITACSHAGLVDEG-KRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISE 358
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A +I+ MPM P VWGALL ACR++ + IAA LF+ SG H+LLS+ +AA
Sbjct: 359 ALGLIESMPMEPPEYVWGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAA 418
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
GR +A L RK M+D G++K G SW+ +H F + H R+ EI +L K+ E+
Sbjct: 419 AGRHMDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEK 478
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
M+AAGY+ DT+ + DV+++EK + +HSE++A+ GL+ +P GVPIR+ KNLR+C DC
Sbjct: 479 MEAAGYVADTSAVVKDVDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDC 538
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H+A K++S GR VI+RDN RFHRF DG CSC D+W
Sbjct: 539 HNAVKYLSKCTGRIVILRDNRRFHRFEDGVCSCGDFW 575
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT C+ + +A + G Q+HA ++K+ FVG S +YSK GL +
Sbjct: 198 EAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVEC 257
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F E PERNL WNA ++ + G A F++++ G P+ ITF + + ACS
Sbjct: 258 AYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITFLSLITACSH 317
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + + +VD G+ + A + + + ++ + W +
Sbjct: 318 AGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGA 377
Query: 183 MLVVYVQNYEEENGCQMF 200
+L+ C+MF
Sbjct: 378 LLM----------ACRMF 385
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 309/586 (52%), Gaps = 49/586 (8%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PN +TFP + + + G Q+H +K G DVF+ Y++ G D
Sbjct: 127 VTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGH 186
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F+ M ERN+ +W + I G RPK A+ F +
Sbjct: 187 KVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEML---------------------- 224
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
N + N LVD Y KC + AK +FD +D+N V + ++L
Sbjct: 225 -------------------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILS 265
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y + + ++G P + S +SA A++ L G+ H V +E
Sbjct: 266 NYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEK 325
Query: 246 N-----IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
N + + +ALVDM+ +CG Q A FNKM ER++ W A IG A +G+ + A
Sbjct: 326 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 385
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F +M + P+ V V VL+ACS G VE+G+ IF S+ +GI P EHY C+VDL
Sbjct: 386 FNQMLIQGVK--PDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDL 442
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAGL+ A+++IK MPM P VWG+LL ACRV+ E+ AA+ + +L P +G H
Sbjct: 443 LGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVH 502
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
VLLSN++A+ G+W + VR +++ G++K G S + V IH F + D SH T I
Sbjct: 503 VLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIA 562
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
ML ++ AG+IPD + L DV+E+EK + HSEK+A+AFGLIA +PIR+
Sbjct: 563 LMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVV 622
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KNLR+C DCHS K S I RE+IVRDNNRFH F G CSC DYW
Sbjct: 623 KNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 34/341 (9%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGLAKVVFDGIIDKNDV-- 178
C L +QLH + ++G D S LV+ + + A+ F+ + K DV
Sbjct: 35 CKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE--LFKEDVRS 92
Query: 179 -SWCSMLVVYVQNYEE----ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
ML ++ Y +++ GV P + VLS C +IA G
Sbjct: 93 DDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQ 152
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH VK +E ++F+ + L+ Y +CG + F M ERN+V W ++I GYA
Sbjct: 153 VHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDR 212
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A+S F EM N V + ++ + GA++ ++F + +
Sbjct: 213 PKEAVSLFFEML--------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVL----- 259
Query: 354 YACVVDLLGRAGLVDRAYEIIKEM----PMRPTISVWGALLNACRV----YGKPELGRIA 405
Y ++ R GL A I+ EM P +++ A+ + ++ YGK G
Sbjct: 260 YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWV 319
Query: 406 ADNLFKLD-PNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
+ K P D + L +MFA G + A V +M +
Sbjct: 320 HTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTE 360
>gi|297804658|ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316049|gb|EFH46472.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 323/567 (56%), Gaps = 14/567 (2%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
LHAL LK G + F + Y K + A K+FDEM E N+ +W + IS G+
Sbjct: 44 LHALTLKLGFASNTFTVNHLVNSYVKLKEINTARKVFDEMCEPNVVSWTSVISGYNDMGQ 103
Query: 92 PKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
P+ A+ F + P+ TF + ACS + ++G+ +H L SG N+ V +
Sbjct: 104 PQTALSMFQEMHEDRSVPPNEYTFASVFKACSALAESRIGKNIHARLEVSGLRRNIVVSS 163
Query: 151 GLVDFYGKCNEVGLAKVVFDGIID--KNDVSWCSMLVVYVQNYEEENGCQMF--LTARRE 206
LVD YGKCN+V +A+ VFD +I +N VSW SM+ Y QN ++F A
Sbjct: 164 SLVDMYGKCNDVEMARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNADST 223
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
P FM++SV++A + + L+ G+ H + + E N V ++L+DMY KCGS+ A
Sbjct: 224 SDRPNQFMLASVINASSSLGRLQWGQISHGLVTRGGYESNNVVATSLLDMYAKCGSLTCA 283
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
E F ++ +++ + ++I A G + AL F+EM + R + PNYVTL+ VL ACS
Sbjct: 284 EKIFFRIRCHSVISYTSMIMAKAKHGLGEAALQLFDEMVAGRIK--PNYVTLLGVLHACS 341
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM--RPTIS 384
+G V +G++ SM KYG+ P + HY CVVD+LGR G VD AY++ K + +
Sbjct: 342 HSGLVNEGLEFLNSMAEKYGVIPDSRHYTCVVDMLGRFGRVDEAYDLAKTIDVGAEQGAL 401
Query: 385 VWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMK 444
+WGALL+A R++G+ E+ A+ L + + + ++ LSN +A G WE+++ +R EMK
Sbjct: 402 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVAGGWEDSESLRLEMK 461
Query: 445 DVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGY-----IPDT 499
G K CSWI K+ +++F A D S + + EI+ L L MK G+ + +
Sbjct: 462 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIKRFLKNLENRMKERGHRGSSSMITS 521
Query: 500 NFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGI 559
+ DV+EE K V H E++ALA+GL+ +P G IRI NLR+C DCH AFK IS I
Sbjct: 522 SSVFVDVDEEAKEEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 581
Query: 560 VGREVIVRDNNRFHRFWDGYCSCSDYW 586
V RE++VRD NRFH F +G C+C D+W
Sbjct: 582 VEREIVVRDVNRFHCFKNGSCTCRDFW 608
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN++TF +FKA SAL GK +HA SG ++ V S DMY K + A
Sbjct: 120 VPPNEYTFASVFKACSALAESRIGKNIHARLEVSGLRRNIVVSSSLVDMYGKCNDVEMAR 179
Query: 66 KMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAF--INLRRTGGEPDLITFCAFLNAC 121
++FD M RN+ +W + I+ R AI+ F N T P+ + +NA
Sbjct: 180 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNADSTSDRPNQFMLASVINAS 239
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
S LQ G+ HG + R G++ N V L+D Y KC + A+ +F I + +S+
Sbjct: 240 SSLGRLQWGQISHGLVTRGGYESNNVVATSLLDMYAKCGSLTCAEKIFFRIRCHSVISYT 299
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA----GLELGRSVHAV 237
SM++ ++ E Q+F ++P + VL AC+ GLE ++++
Sbjct: 300 SMIMAKAKHGLGEAALQLFDEMVAGRIKPNYVTLLGVLHACSHSGLVNEGLEF---LNSM 356
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDA---EIAFNKMPERNLVCWNAIIGGYAHQGHA 294
A K V + + +VDM G+ G + +A + E+ + W A++ G
Sbjct: 357 AEKYGVIPDSRHYTCVVDMLGRFGRVDEAYDLAKTIDVGAEQGALLWGALLSAGRLHGRV 416
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
++ + + + + Y+ L S A AV G + S+ L+ +
Sbjct: 417 EIVSEASKRLIQSNQQVTSAYIAL-------SNAYAVAGGWEDSESLRLEMKRSGNVKER 469
Query: 355 AC 356
AC
Sbjct: 470 AC 471
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
EP D ++++L HA+ +K N F + LV+ Y K I A
Sbjct: 34 EPTDLFLTNLL---------------HALTLKLGFASNTFTVNHLVNSYVKLKEINTARK 78
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F++M E N+V W ++I GY G ALS F+EM R PN T V ACS
Sbjct: 79 VFDEMCEPNVVSWTSVISGYNDMGQPQTALSMFQEMHEDR-SVPPNEYTFASVFKACSAL 137
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP--MRPTISVW 386
G I + + G++ + +VD+ G+ V+ A + M R +S W
Sbjct: 138 AESRIGKNIHARLEVS-GLRRNIVVSSSLVDMYGKCNDVEMARRVFDSMIGYGRNVVS-W 195
Query: 387 GALLNACRVYGKPELGRIAADNLFKL----DPNDSGNHVLLSNMFAAT 430
+++ A Y + G A + LF+ +D N +L+++ A+
Sbjct: 196 TSMITA---YAQNARGHEAIE-LFRSFNADSTSDRPNQFMLASVINAS 239
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 320/566 (56%), Gaps = 11/566 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-RNLATWNAYISNAVL 88
KQLH ++ G V + YSK GL +A +F M E R+ +WN+ I
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ 217
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
A+ + + G + D+ T + LNA + L GRQ HG L+++GF N V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 149 CNGLVDFYGKC---NEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE-EENGCQMFLTAR 204
+GL+DFY KC + + ++ VF I+ + V W +M+ Y N E E + F +
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN-IFVGSALVDMYGKCGSI 263
R G P D V SAC+ ++ + +H +A+K+ + N I V +AL+ +Y K G++
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNL 397
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
QDA F++MPE N V +N +I GYA GH AL ++ M + PN +T V VLS
Sbjct: 398 QDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM--LDSGIAPNKITFVAVLS 455
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AC+ G V++G + F +M + I+P AEHY+C++DLLGRAG ++ A I MP +P
Sbjct: 456 ACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS 515
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
W ALL ACR + L AA+ L + P + +V+L+NM+A +WEE VRK M
Sbjct: 516 VAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSM 575
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
+ I+K GCSWI VK + H+F A+D SH E+ L ++ ++MK GY+ D +A+
Sbjct: 576 RGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAM 635
Query: 504 YDVEEEEKMT---EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
+E + +GHHSEK+A+AFGL++ G + + KNLRICGDCH+A KF+S +
Sbjct: 636 VKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVA 695
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
GRE+IVRDN RFH F DG CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 220/506 (43%), Gaps = 81/506 (16%)
Query: 7 SPNDF-TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG------ 59
+P F TF L S A TGK LHAL +KS ++ ++YSK G
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 60 ---------------------LKDD----ADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
KD A ++FDE+P+ + ++N IS
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ F +R+ G E D T + AC C + L +QLH F V GFD SV N V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 155 FYGKCNEVGLAKVVFDGIID-KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+Y K + A VF G+ + +++VSW SM+V Y Q+ E ++ +G + F
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG---SIQDAEIAF 270
++SVL+A + L GR H +KA N VGS L+D Y KCG + D+E F
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 271 NKMPERNLVCWNAIIGGYA-HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
++ +LV WN +I GY+ ++ ++ A+ SF +M R P+ + VCV SACS
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ--RIGHRPDDCSFVCVTSACSNLS 359
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHY-ACVVDLLGRAGLVDRAYEIIKEMP---------- 378
+ + +I + + +K I ++ L ++G + A + MP
Sbjct: 360 SPSQCKQI-HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 379 ------------------------MRPTISVWGALLNACRVYGKPELGRIAADNL---FK 411
+ P + A+L+AC GK + G+ + + FK
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEAD 437
++P ++ ++ + ++ G+ EEA+
Sbjct: 479 IEP-EAEHYSCMIDLLGRAGKLEEAE 503
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 11/317 (3%)
Query: 11 FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD---DADKM 67
FT + A ++L + G+Q H +K+G + VG D YSK G D D++K+
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 68 FDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F E+ +L WN IS + + A+ +F ++R G PD +F +ACS+ S
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 127 LQLGRQLHGFLVRSGFDGN-VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+Q+HG ++S N +SV N L+ Y K + A+ VFD + + N VS+ M+
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VE 244
Y Q+ ++ G+ P +VLSACA ++ G+ + +E
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS--SF 301
S ++D+ G+ G +++AE + MP + V W A++G A + H +MAL+ +
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG--ACRKHKNMALAERAA 538
Query: 302 EEMTSMRCEAVPNYVTL 318
E+ M+ A YV L
Sbjct: 539 NELMVMQPLAATPYVML 555
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
M+R P+D +F C+ A S L P KQ+H LA+KS + + V + +Y K+G
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +FD MPE N ++N I G A+ + + +G P+ ITF A L+
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Query: 120 ACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-ND 177
AC+ C + G++ + + + + ++D G+ ++ A+ D + K
Sbjct: 456 ACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS 515
Query: 178 VSWCSML 184
V+W ++L
Sbjct: 516 VAWAALL 522
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/585 (37%), Positives = 323/585 (55%), Gaps = 32/585 (5%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +++G D F+ SK D A ++F N+ + A I V G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+AI + + PD + L AC L+ GR++H ++ G N V
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187
Query: 152 LVDFYGKCNEVGLAKVVFD-------------------GIID-----------KNDVSWC 181
+++ YGKC E+G A+ VF+ G+++ K+ V W
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ +V+N E + F + E V P +F I VLSAC+++ LE+GR VH+ K
Sbjct: 248 AMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N+FVG+AL++MY +CGSI +A+ F++M +R+++ +N +I G + G + A+ F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M R P VT V VL+ACS G V+ G KIF+SMT YG++P EHY C+VDLL
Sbjct: 368 RVMIGRRLR--PTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLL 425
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GR G ++ AY++I+ M M P + G LL+AC+++ ELG A L DSG +V
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYV 485
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLS+++A++G+W+EA VR +MK+ G++K GCS I V N IH F D H R I
Sbjct: 486 LLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 545
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +L ++ GY P+ L D+E+ EK + HSE++A+ +GLI+ P IR+ K
Sbjct: 546 KLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMK 605
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCHSA K I+ I R+V+VRD NRFH F +G CSC DYW
Sbjct: 606 NLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 31/297 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+++ + KA + G+++H+ ALK G + V ++Y K G
Sbjct: 138 MLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGE 197
Query: 61 KDDADKMFDEMPERNLAT------------------------------WNAYISNAVLGG 90
DA ++F+EMPE +A+ W A I V
Sbjct: 198 LGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNE 257
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A++AF ++ P+ T L+ACS L++GR +H ++ + + N+ V N
Sbjct: 258 EMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGN 317
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ Y +C + A+ VFD + D++ +++ +M+ N + ++F + P
Sbjct: 318 ALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRP 377
Query: 211 KDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ VL+AC+ ++ G + H++ VE I +VD+ G+ G +++A
Sbjct: 378 TNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 434
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 329/594 (55%), Gaps = 38/594 (6%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G ++H +K G DV++ C+ + Y + + A+++F EMP WN I +
Sbjct: 542 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 601
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ + ++ F ++ + + + T L A S+ L +G++ HG+++R+GFD +V
Sbjct: 602 SEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVY 661
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY-----------VQNYEEENG 196
V L+D Y K + + A+ VFD + ++N +W S++ Y + N E+ G
Sbjct: 662 VGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG 721
Query: 197 CQ------------------------MFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ F ++EGV P I+ +L ACA ++ L+ G+
Sbjct: 722 IKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGK 781
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H ++++ ++FV +AL+DMY K S+++A F ++ + L WN +I G+A G
Sbjct: 782 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 841
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A+S F EM + P+ +T +LSAC +G + +G K F SM Y I P E
Sbjct: 842 LGKEAISVFNEMQ--KVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLE 899
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C+VDLLGRAG +D A+++I MP++P ++WGALL +CR++ + AA NLFKL
Sbjct: 900 HYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKL 959
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
+PN+S N++L+ N+++ RWE+ D +R+ M G++ SWI + R+H+F + +
Sbjct: 960 EPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKP 1019
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H +I L +L EMK GY+PD N +++E EK + H+EK+A+ +GLI +
Sbjct: 1020 HPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMK 1079
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G PIR+ KN RIC DCHSA K+IS + RE+ +RD RFH F +G CSC+D+W
Sbjct: 1080 AGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 167/359 (46%), Gaps = 37/359 (10%)
Query: 74 RNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
RN WN+++ G ++ F L G D + L C+ + LG +
Sbjct: 485 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 544
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+HG L++ GFD +V + L++FYG+C + A VF + + + W +++ +Q+ +
Sbjct: 545 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 604
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSAC-ARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ G ++F + ++ + I VL A + + L +G+ H ++ + +++VG+
Sbjct: 605 LQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGT 664
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------- 304
+L+DMY K S+ A+ F+ M RN+ WN+++ GY+ +G + AL +M
Sbjct: 665 SLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 724
Query: 305 -------------------------TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIF 338
M+ E V PN ++ C+L AC+ ++KG +I
Sbjct: 725 DLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEI- 783
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ ++++ G ++D+ ++ + A+++ + + + T++ W ++ ++G
Sbjct: 784 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK-TLASWNCMIMGFAIFG 841
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M++E + PN + CL +A ++L + GK++H L++++G I DVFV + DMYSK+
Sbjct: 752 MQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSS 811
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A K+F + + LA+WN I + G K AI F +++ G PD ITF A L+A
Sbjct: 812 LKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 871
Query: 121 CSDCSLLQLG 130
C + L+ G
Sbjct: 872 CKNSGLIGEG 881
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/594 (36%), Positives = 320/594 (53%), Gaps = 52/594 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I P+ T+P + K+ + L G +H + L+ G D FV S DMY K
Sbjct: 170 MLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEK 229
Query: 61 KDDADKMFDEMPER-----NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFC 115
A K+FDE PER + WN I G K A+ F + +
Sbjct: 230 LGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK----------- 278
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
NVS + L+D + K ++ A +FD + +K
Sbjct: 279 ---------------------------KENVS-WSTLIDGFAKNGDMDRAMELFDQMPEK 310
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N VSW +M+ + +N + E MF EGV P F I S LSACA+I GLE G +H
Sbjct: 311 NVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIH 370
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
+ +G+ALVDMY KCG+I+ A F + ++++ W +I G+A GH++
Sbjct: 371 KYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSE 430
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A++ F++M M P+ V + +L+AC +G V+ G+ F SM L Y I+P +HY
Sbjct: 431 QAIACFKQM--MFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYT 488
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
+VD+LGR+G + A I+ MPM P +WGAL ACR + K ++ + A + L KL+P
Sbjct: 489 LIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPT 548
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
+GN++ LSN +AA G+WE+A+ VR M++ G+ K +G S I V+ ++H F + D H+
Sbjct: 549 HTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHK- 607
Query: 476 NTEIQAMLTKLREEMKAA---GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
+ +A+ KL E M A GYIP T + L+++E+EEK +G H EK+ALAF LI
Sbjct: 608 --DSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTS 665
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG+ IRI KNL++CGDCHS K+ S I RE+++RD RFH F DG CSC D+W
Sbjct: 666 PGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 146/380 (38%), Gaps = 83/380 (21%)
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+PK+++ A T E I+ ++LQL Q+H ++ + +
Sbjct: 64 KPKSSLSALFIPPTTPTEAHFISLIH-----GSKTILQL-HQIHAQIIIHNLSSSSLITT 117
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ + + VF+ KN ++ +++ N N F R G++P
Sbjct: 118 QLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKP 177
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG------------ 258
VL + A + ELG ++H + ++ +E + FV +LVDMY
Sbjct: 178 DRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVF 237
Query: 259 ------------------------KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
K GS++ A F MP++ V W+ +I G+A G
Sbjct: 238 DESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDM 297
Query: 295 DMALSSFEEM----------------------------TSMRCEAV-PNYVTLVCVLSAC 325
D A+ F++M + M E V PN T+V LSAC
Sbjct: 298 DRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSAC 357
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHY-----ACVVDLLGRAGLVDRAYEIIKEMPMR 380
++ G +E G++I KY IK H +VD+ + G ++ A E+ E +
Sbjct: 358 AKIGGLEAGLRIH-----KY-IKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQK 411
Query: 381 PTISVWGALLNACRVYGKPE 400
+I W ++ ++G E
Sbjct: 412 -SIRTWTVMIWGWAIHGHSE 430
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 329/584 (56%), Gaps = 19/584 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT PC+ K + L + GKQ+H LALK G DVFV S +MYSK G D A K+
Sbjct: 110 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 169
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
FD M ++++ WN+ I G ID + L E D ++ ++ S C +
Sbjct: 170 FDGMIDKDVVLWNSLIDGYARCGE----IDIALQLFEEMPERDAFSWTVLVDGLSKCGKV 225
Query: 128 QLGRQLHGFLVRSGFDG----NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
+ R+L FD N+ N +++ Y K + A +F + + V+W M
Sbjct: 226 ESARKL--------FDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLM 277
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
+ Y N + + +MF + G P + SVLSA + +A L GR +H+ K
Sbjct: 278 IAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF 337
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
E + +G++L++MY KCG I+ A F + ++ + W AII G G A+ AL+ F E
Sbjct: 338 ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLE 397
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M + PN + + VL+AC+ AG V+ G + F M +Y I+P EHY C+VD+L R
Sbjct: 398 MCKTGLK--PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCR 455
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
AG ++ A I+ MP+ P +W +LL R +GK ++G AA + ++ P G ++LL
Sbjct: 456 AGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILL 515
Query: 424 SNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAML 483
SNM+AA+G WE+ VR+ M G +K GCS + K +H F D SH + EI A +
Sbjct: 516 SNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKM 575
Query: 484 TKLREEMKAAGYIPDTNFALYDVE-EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
++++E++K G++PDT L +E E+EK E+ +HSE++A+AFGLI + PG+PIRI KN
Sbjct: 576 SEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKN 635
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCHS K +S I RE+IVRDN RFH F +G CSC DYW
Sbjct: 636 LRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 191/483 (39%), Gaps = 118/483 (24%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDEMPERNLATWNAYI 83
P +QLHA +LK+ + FV +YS + D A +FD + R+L WN I
Sbjct: 26 PQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTII 85
Query: 84 SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
V + I F L PD T + C+ ++Q G+Q+HG ++ GF
Sbjct: 86 KCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTA 203
+V V LV+ Y KC E+ A+ VFDG+IDK+ V W S++ Y + E + Q+F
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF--- 201
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ E + F + LVD KCG +
Sbjct: 202 ------------------------------------EEMPERDAFSWTVLVDGLSKCGKV 225
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM------------------- 304
+ A F++MP RNLV WNA+I GY G D AL F +M
Sbjct: 226 ESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNG 285
Query: 305 ----------TSMRCEAVPNYVTLVCVLSACS---------------------------- 326
++ + P++ TLV VLSA S
Sbjct: 286 QFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 345
Query: 327 -------RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-- 377
+ G +E + +F ++ K H+ ++ LG G+ + A + EM
Sbjct: 346 SLIEMYAKCGCIESALTVFRAIQ-----KKKVGHWTAIIVGLGIHGMANHALALFLEMCK 400
Query: 378 -PMRPTISVWGALLNACRVYGKPELGRIAAD---NLFKLDPNDSGNHVLLSNMFAATGRW 433
++P ++ +LNAC G + GR D N +K++P ++ L ++ G
Sbjct: 401 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE-HYGCLVDILCRAGHL 459
Query: 434 EEA 436
EEA
Sbjct: 460 EEA 462
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/482 (41%), Positives = 288/482 (59%), Gaps = 6/482 (1%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE----VGL 164
P+ T+ L AC+ L LG+ +HG +++ GF V+V N LV Y C +
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
A+ VFD + + VSW +M+ YV+ + +F + +GV P + + SVLSAC
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+ LELG+ V + K V+ N+ + +AL+DM+ KCG + A F M ERN+V W ++
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
IGG A G A++ FEEM +R P+ V + +LSACS +G V+KG + F SM
Sbjct: 188 IGGLAMHGRGVEAVAVFEEM--VRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKD 245
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
+ I P EHY C+VD+L RAGLV A + ++EMP+ P VW L+NACR +G+ +LG
Sbjct: 246 FSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEK 305
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
L + +P N+VLLSN++A WE+ +R+ M G+KK G + I + N I+
Sbjct: 306 ITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIY 365
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIAL 524
F A D SH ++ EI M+ ++ +EMK AGY+P T L D+++E+K + HSEK+A+
Sbjct: 366 EFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAI 425
Query: 525 AFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
AF L+ PPG IRI KNLR+C DCHSA KFIS I RE++VRD NRFH F +G CSC D
Sbjct: 426 AFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRD 485
Query: 585 YW 586
+W
Sbjct: 486 FW 487
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 16/354 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMY----SKTGLKDD 63
PN FT+P + KA + + GK +H +K G +V V + MY G +
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K+FDEM + + +W+A I V GR +AI+ F ++ G PD IT + L+AC+
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+LG+ + ++ + NV + N L+D + KC +V A +F + ++N VSW S+
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKAC 242
+ + +F R GV P D + +LSAC+ ++ G R ++
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFS 247
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSF 301
+ I +VDM + G +++A +MP + N V W +I A + H ++ L
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLIN--ACRAHGELKLGEK 305
Query: 302 EEMTSMRCEAV--PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK--PGA 351
+R E + NYV L + + S EK +I +M +K G+K PG+
Sbjct: 306 ITRQLIRNEPMHESNYVLLSNIYAKMSDW---EKKTRIREAMDMK-GMKKIPGS 355
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + P++ T + A + L GK + + K +V + + DM++K G
Sbjct: 106 MQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGD 165
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +F M ERN+ +W + I + GR A+ F + R+G PD + F L+A
Sbjct: 166 VDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSA 225
Query: 121 CSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKND 177
CS L+ G++ + R F + +VD + V A K V + ID N
Sbjct: 226 CSHSGLVDKGKRYFDSM-RKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNP 284
Query: 178 VSWCSML 184
V W +++
Sbjct: 285 VVWRTLI 291
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/587 (36%), Positives = 333/587 (56%), Gaps = 5/587 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDV-FVGCSAFDMYSKTG 59
M+ + PN T + A + L G+ +H ++ ++ F+G + ++Y+ TG
Sbjct: 293 MQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTG 352
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D K+F+ + E+ + +WN IS G+P+ A+ F+ ++ G PD + + L+
Sbjct: 353 NLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLS 412
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC S QLG Q+HG+++++G + N V N L+D Y KC V A +F+ I +K+ V+
Sbjct: 413 ACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVT 471
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W SM+ + QN +F V+ SV+ AC+ + LE G+ VH +
Sbjct: 472 WNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI 531
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + ++ +AL DMY KCG +Q A F++M ER++V W+ +I GY G + +S
Sbjct: 532 MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATIS 591
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F +M + PN +T + +LSACS AGAVE+G F SM+ ++G++P +H+AC+VD
Sbjct: 592 LFNQMLGSGIK--PNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVD 648
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LL RAG ++ AY+II +P S+WGALLN CR++ + ++ + NL +D D+G
Sbjct: 649 LLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGY 708
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+ LLSN++A G W++ VR MK G++K G S I + +I+ F DTSH + +I
Sbjct: 709 YTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDI 768
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L R + A Y + + ++ + K V HSEK+A+AFG+I PG +RI
Sbjct: 769 YRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRI 828
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+KNLR+C DCHS K S I GRE+I+RD NRFH F +G CSC+DYW
Sbjct: 829 SKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 224/458 (48%), Gaps = 21/458 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + P+ T + +A S L G+ +H ++ + + S MY K G
Sbjct: 192 MISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F+ +P R A W IS G + A++ F ++ EP+ +T L A
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCA 311
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCN-GLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ ++ GR +HGF++R D + L++ Y + VF+ I +K +S
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +++ ++ +N + E +F+ + +G+ P + ++S LSAC I+ +LG +H +
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 240 KACVEGNI--FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
K GN FV +AL+DMY KCG + A F K+ E++LV WN++I G++ G++ A
Sbjct: 432 KT---GNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEA 488
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
++ F++M M C + + +T + V+ ACS G +EKG + + + + YG++ + +
Sbjct: 489 ITLFDQMY-MNCVKM-DKLTFLSVIQACSHLGYLEKGKWVHHKLIM-YGLRKDSYLDTAL 545
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------ 411
D+ + G + A+ + M R +S W ++ ++G+ A +LF
Sbjct: 546 TDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAGYGMHGQIN----ATISLFNQMLGSG 600
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
+ PND +LS A G EE L M + G++
Sbjct: 601 IKPNDITFMHILSACSHA-GAVEEGKLYFNSMSEFGVE 637
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 190/386 (49%), Gaps = 12/386 (3%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
++F FP + KA S G ++H +K G D V S MY + DDA K F
Sbjct: 99 SNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAF 158
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
D MP R++ W++ + N V G+ +D F + EPD +T + ACS+ L+
Sbjct: 159 DTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLR 218
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
LGR +HG++VR + N S+ N L+ YGK ++ A+ +F+ + + W M+ Y
Sbjct: 219 LGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYN 278
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI- 247
Q+ + +F + +EP + VL ACAR+ ++ GRSVH ++ ++ +
Sbjct: 279 QSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELD 338
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
F+G AL+++Y G+++D F + E+ ++ WN +I + G + AL F +M +
Sbjct: 339 FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQ 398
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH---YACVVDLLGRA 364
+P+ +L LSAC + G +I Y IK G + ++D+ +
Sbjct: 399 --GLMPDSYSLASSLSACGTISFSQLGAQIH-----GYIIKTGNFNDFVQNALIDMYAKC 451
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALL 390
G V A ++ +++ + ++ W +++
Sbjct: 452 GFVHSANKMFEKIKEKSLVT-WNSMI 476
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 183/379 (48%), Gaps = 12/379 (3%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
T QLHA +G + Y++ G+ + + ++FD P+ + W I
Sbjct: 15 TTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCY 74
Query: 87 VLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V GG + A+ + + + + F + L ACS L +G ++HG +++ GF+ +
Sbjct: 75 VWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESD 134
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V L+ YG+ + + A FD + ++ V+W S+++ +VQN + G MF
Sbjct: 135 AVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMIS 194
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E VEP + SV AC+ + L LGRSVH V+ +E N + ++L+ MYGK G +
Sbjct: 195 EAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYS 254
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
AE F +P R W +I Y G AL+ F +M + E PN VT+V VL AC
Sbjct: 255 AERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKME--PNQVTMVGVLCAC 312
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYA-CVVDLLGRAG-LVD--RAYEIIKEMPMRP 381
+R G V++G + + ++ + P + +++L G L D + +E IKE
Sbjct: 313 ARLGRVKEGRSV-HGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKE----K 367
Query: 382 TISVWGALLNACRVYGKPE 400
TI W L++ G+PE
Sbjct: 368 TILSWNTLISIFTRNGQPE 386
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 320/560 (57%), Gaps = 7/560 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---ADKMFDEMPERNLATWNAYISNAV 87
Q+ A A+KS I DV + +++ + A +F+ M E ++ +N+
Sbjct: 47 QIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P F+ + G PD TF + L AC+ L+ GRQLH ++ G D NV
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VC L++ Y +C +V A+ VFD I++ V + +M+ Y + +F + +
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++P + + SVLS+CA + L+LG+ +H A K + V +AL+DM+ KCGS+ DA
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F KM ++ W+A+I YA+ G A+ ++ FE M S + P+ +T + +L+ACS
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ--PDEITFLGLLNACSH 343
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G VE+G K F M K+GI P +HY +VDLL RAG ++ AYE I ++P+ PT +W
Sbjct: 344 TGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWR 403
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC + +L ++ +F+LD + G++V+LSN++A +WE D +RK MKD
Sbjct: 404 ILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRK 463
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-DV 506
K GCS I V N +H F + D T++ L ++ +E+K +GY+PDT+ ++ ++
Sbjct: 464 AVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANM 523
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
++EK + +HSEK+A+ FGL+ PPG IR+ KNLR+C DCH+A K IS I GR+V++
Sbjct: 524 NDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVL 583
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD RFH F DG CSC D+W
Sbjct: 584 RDVQRFHHFEDGKCSCGDFW 603
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 2/315 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+++TFP L KA + G+QLH L++K G +V+V + +MY++ D A
Sbjct: 125 ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD + E + +NA I+ RP A+ F ++ +P+ IT + L++C+
Sbjct: 185 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG 244
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+ +H + + F V V L+D + KC + A +F+ + K+ +W +M+V
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVE 244
Y + + E MF R E V+P + +L+AC+ +E GR + V K +
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+I ++VD+ + G+++DA +K+P + W ++ + + D+A E
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 304 MTSMRCEAVPNYVTL 318
+ + +YV L
Sbjct: 425 IFELDDSHGGDYVIL 439
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN+ T + + + L GK +H A K V V + DM++K G
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F++M ++ W+A I G+ + ++ F +R +PD ITF LNA
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
CS ++ GR+ +V + G ++ +VD + + A IDK +S
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY----EFIDKLPIS 396
Query: 180 WCSML 184
ML
Sbjct: 397 PTPML 401
>gi|357115878|ref|XP_003559712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 650
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/588 (36%), Positives = 322/588 (54%), Gaps = 13/588 (2%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHD---VFVGCSAFDMYSKTGLKDDA 64
P F LFKA+S+ P G QLHA A+ G + D + + + + Y+ D A
Sbjct: 67 PTPRLFSALFKAASSAS-PSMGAQLHAQAVVRGFLDDAGSIILPTAILNFYASCREPDLA 125
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSD 123
++FD M N TWNA I GR + A++ F+ +RR PD TF A L+
Sbjct: 126 RRVFDAMACTNAVTWNALIKGYAQAGRREEALELFLAMRRQSHVAPDRYTFPALLSGIGR 185
Query: 124 CS----LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ +LG +HG ++SG + + V LV Y + KVVFD + + V
Sbjct: 186 EQGGGCMQELGGAVHGQAIKSGLNRDPFVGASLVSMYAARGALDEVKVVFDDVDTLDPVV 245
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ YV EEE F ++P+ F+ SS+ + C ++ LE+GR VHA ++
Sbjct: 246 WSSLISAYVNCKEEEGALLTFYRMLCRDIKPRQFVYSSMFAVCGSMSMLEMGRQVHAHSL 305
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ + + + +AL+ MY CG I+DA FN ++V +N+II GH A
Sbjct: 306 KSNTDKDAAMTNALLTMYSDCGCIRDALRVFNSNDIVDVVSYNSIILALGQHGHPKEATE 365
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ +M C + P+ VTL+ +LSA + AG V +G+ IF SM GIKP +HYACV
Sbjct: 366 LYRQMN---CAGLMPDDVTLLNLLSAFNHAGLVHEGLHIFNSMLDMEGIKPTYQHYACVA 422
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSG 418
D+L R+G + A + I EMP +W +L AC + G A+ LF+++P ++
Sbjct: 423 DMLARSGQIGEAMKTIYEMPFEAEAPLWRIILGACSKHRDIRTGTKIAEMLFEMEPYEAT 482
Query: 419 NHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTE 478
N++LL N++ GRW EA+ VR M+ GI + SWI + R H F D SH + E
Sbjct: 483 NYILLGNIYTRLGRWTEAEKVRNMMEKRGIDRDDAFSWIEISQRTHRFGVDDRSHPISRE 542
Query: 479 IQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIR 538
I L +L +K AGY+PD +FA ++++++ + + +H EK+A AFG +A P G +R
Sbjct: 543 IYRNLDRLIGSIKVAGYVPDISFAAHNIKKDRREESLHYHCEKLAFAFGDLATPSGDTLR 602
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGDCH A+K+ S I GRE+I+RDN+RFH F G CSC DYW
Sbjct: 603 IMKNLRVCGDCHCAYKYFSLITGREIILRDNHRFHHFNKGACSCGDYW 650
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P F + +F ++ + G+Q+HA +LKS D + + MYS G DA
Sbjct: 274 IKPRQFVYSSMFAVCGSMSMLEMGRQVHAHSLKSNTDKDAAMTNALLTMYSDCGCIRDAL 333
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ ++ ++N+ I G PK A + + + G PD +T L+A +
Sbjct: 334 RVFNSNDIVDVVSYNSIILALGQHGHPKEATELYRQMNCAGLMPDDVTLLNLLSAFNHAG 393
Query: 126 LLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSW 180
L+ G + + L G + D + ++G A K +++ + W
Sbjct: 394 LVHEGLHIFNSMLDMEGIKPTYQHYACVADMLARSGQIGEAMKTIYEMPFEAEAPLW 450
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 320/560 (57%), Gaps = 46/560 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E N+++F A + L G Q+H L KS DV++G + DMYSK +
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A + FD+M RN+ +WN+ I+ G A++ F+ + G EPD IT + +A
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASA 261
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--------- 170
C+ S ++ G Q+H +++ + ++ + N LVD Y KC V A++VFD
Sbjct: 262 CASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVS 321
Query: 171 ----------------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
++++N VSW +++ Y QN E E ++FL +RE +
Sbjct: 322 ETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVK------ACVEGNIFVGSALVDMYGKCGS 262
P + ++L+ACA +A L+LGR H +K + + +IFVG++L+DMY KCG
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
++D + F +M ER+ V WNA+I GYA G+ AL F EM + P++VT++ VL
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREM--LVSGERPDHVTMIGVL 499
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SACS AG VE+G F SMT+++G+ P +HY C+VDLLGRAG +D A +I+ MPM P
Sbjct: 500 SACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPD 559
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
VWG+LL AC+V+G LG+ A+ L ++DP +SG +VLLSNM+A GRW++ VRK+
Sbjct: 560 AVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQ 619
Query: 443 MKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFA 502
M+ +G+ K GCSWIS+++ +H+F KD H +I +L L E+MK GY+P+ +
Sbjct: 620 MRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEAD-- 677
Query: 503 LYDVE--EEEKMTEVGHHSE 520
D E EEE +E+ HSE
Sbjct: 678 --DDEPYEEESDSELILHSE 695
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 83/436 (19%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
+ +HA +K+ ++F+ D+Y K G +DA K+FD M +RN +W NAVL
Sbjct: 38 ARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSW-----NAVL 92
Query: 89 GGRPK-NAIDAFINLRRTGGEPDL-----------------------------------I 112
G K A+D +NL + E D
Sbjct: 93 GALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEY 152
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
+F + L+AC+ L +G Q+HG + +S + +V + + LVD Y KC V A+ FD +
Sbjct: 153 SFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDM 212
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+N VSW S++ Y QN ++F+ G+EP + ++SV SACA ++ + G
Sbjct: 213 DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGL 272
Query: 233 SVHAVAVKA-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP----------------- 274
+HA +K ++ +G+ALVDMY KC + +A + F++MP
Sbjct: 273 QIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKA 332
Query: 275 --------------ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
ERN+V WNA+I GY G + A+ F + R P + T
Sbjct: 333 SSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLF--LLLKRESIWPTHYTFGN 390
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYG--IKPGAEHYACV----VDLLGRAGLVDRAYEII 374
+L+AC+ ++ G + ++ LK+G K G + V +D+ + GLV+ +
Sbjct: 391 LLNACANLADLKLGRQA-HTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVF 449
Query: 375 KEMPMRPTISVWGALL 390
+ M R +S W A++
Sbjct: 450 ERMLERDNVS-WNAMI 464
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 33/302 (10%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F L+ C + R +H ++++ F + + N LVD YGKC + A+ VFD +
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 174 DKNDVSW----------------------------CS---MLVVYVQNYEEENGCQMFLT 202
+N SW CS M+ + Q E + +
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
E ++ S LSACA + L +G +H + K+ ++++GSALVDMY KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A+ AF+ M RN+V WN++I Y G A AL F M M C P+ +TL V
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM--MNCGIEPDEITLASVA 259
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SAC+ A+ +G++I + + +VD+ + V+ A + MP+R
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDV 319
Query: 383 IS 384
+S
Sbjct: 320 VS 321
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 313/539 (58%), Gaps = 31/539 (5%)
Query: 50 SAFDMYSKTGLK--DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG 107
S F + G++ + A K+FDE+ +R++ +WN+ IS V G + +D F + G
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
DL T + +++ N L+D Y K + A
Sbjct: 248 NTDLATMVSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQ 280
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF+ + +++ VSW SM+ Y + + ++F +E + P ++ +L ACA +A
Sbjct: 281 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAA 340
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G+ +H ++ + V +ALVDMY KCG++ A + F+ +PE++LV W +I G
Sbjct: 341 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 400
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G+ A+++F EM + E P+ V+ + +L ACS +G +++G F M I
Sbjct: 401 YGMHGYGSEAIAAFNEMRNSGIE--PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCI 458
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
+P +EHYAC+VDLL RAG + +AY+ IK MP+ P ++WGALL CR+Y +L A+
Sbjct: 459 EPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAE 518
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
++F+L+P ++G +VLL+N++A +WEE +R+ + G++K GCSWI +K ++HIF
Sbjct: 519 HVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFV 578
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D+SH +I+ +L K R MK G+ P +AL ++ EK + HSEKIA+AFG
Sbjct: 579 TGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFG 638
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
++++PPG +R+TKNLR+CGDCH KF+S +V R++I+RD+NRFH F DG CSC +W
Sbjct: 639 ILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 165/368 (44%), Gaps = 50/368 (13%)
Query: 76 LATWNAYISNAVLGGR--PKNAIDAFI--------------NLRRT------GGEPDL-- 111
L + N Y S A +G P ID I NLRR +PDL
Sbjct: 42 LVSSNLYHSCATIGTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLEL 101
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
T+C+ L C+D +Q GR++H + + + + + + LV Y C ++ + +FD
Sbjct: 102 RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161
Query: 172 IIDKNDVSWCSMLVVYVQ--NYEE---------ENGCQMFLTARREGVEPKD-------F 213
+ ++ W ++ Y + N+ E E G + +AR+ E D
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 214 MISSVLSACARIAGLELGRSVHAVAVK----ACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
MIS +S GL+L + + + V + + + L+DMY K G++ A
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQV 281
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F M ER++V W ++I GYA +G +DM++ F EM + + PN +T+ C+L AC+
Sbjct: 282 FETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME--KEDLFPNSITMACILPACASLA 339
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
A+E+G +I + L+ G +VD+ + G + A + +P + +S W +
Sbjct: 340 ALERGQEI-HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS-WTVM 397
Query: 390 LNACRVYG 397
+ ++G
Sbjct: 398 IAGYGMHG 405
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M +E + PN T C+ A ++L G+++H L++G D V + DMY K G
Sbjct: 316 MEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGA 375
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD +PE++L +W I+ + G AI AF +R +G EPD ++F + L A
Sbjct: 376 LGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYA 435
Query: 121 CSDCSLLQLG 130
CS LL G
Sbjct: 436 CSHSGLLDEG 445
>gi|449450898|ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 328/565 (58%), Gaps = 7/565 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
++ H++ALK G +++ + Y + A ++FDEMP N+ +W + ++
Sbjct: 41 ISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGY 100
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
V G+P A+ F + R+ P+ TF + ACS S L+ G H + G+ GN+
Sbjct: 101 VDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNI 160
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC+ L+D YGKCN+V A+ VF+ + KN VSW SM+ Y QN + ++F
Sbjct: 161 VVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSL 220
Query: 207 GVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E P +M++SV+SACA + L G+ +H A+ + + V S LVDMY KCGS+
Sbjct: 221 SSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDY 280
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
++ FN++ +++ + ++I A G +L FEEM +R PN++TLV VL AC
Sbjct: 281 SDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEM--VRKGLKPNHITLVGVLHAC 338
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP--TI 383
S +G +G+ SM KYGI P +HY CVVD+L R G +D+A+++ K M + P
Sbjct: 339 SHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKA 398
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+WGALL+A R +G+ ++ A L + +G +V LSN++A+ G E+A +R EM
Sbjct: 399 LLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEM 458
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKD-TSHERNTEIQAMLTKLREEMKAAGYIPDTN-F 501
K G+ K GCSWI +K+ +IF A + TS R E+ +L +L ++MK GY+
Sbjct: 459 KRTGVHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGL 518
Query: 502 ALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVG 561
D+EEE + +V HSE++AL FGLI+IP G+ IRI KNLR+C DCH AFK IS I+
Sbjct: 519 VFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIME 578
Query: 562 REVIVRDNNRFHRFWDGYCSCSDYW 586
RE +VRD NRFH F +G C+C+ +W
Sbjct: 579 REFVVRDINRFHHFKNGCCTCNGFW 603
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 151/347 (43%), Gaps = 10/347 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + PNDFTF KA S L G+ HA G ++ V S DMY K
Sbjct: 116 MLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCND 175
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLN 119
A +F+ M +N+ +W + I+ A+ F E P+ + ++
Sbjct: 176 VVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVIS 235
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L G+ +HG + G D + V + LVD Y KC + + VF+ I + + +
Sbjct: 236 ACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIP 295
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAV 237
+ SM+V + Q+F R+G++P + VL AC+ +GL E + ++
Sbjct: 296 YTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSH-SGLPNEGLYYLTSM 354
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQ---DAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
K + + +VDM + G + D + + P+ + W A++ G
Sbjct: 355 YEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRV 414
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
D+A + +++ + + YVTL V ++ AG +EK K+ M
Sbjct: 415 DIAAEACQQLVNSNRQVAGAYVTLSNVYAS---AGDMEKAHKLRVEM 458
>gi|449517497|ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 328/565 (58%), Gaps = 7/565 (1%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
++ H++ALK G +++ + Y + A ++FDEMP N+ +W + ++
Sbjct: 41 ISSISTHSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGY 100
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
V G+P A+ F + R+ P+ TF + ACS S L+ G H + G+ GN+
Sbjct: 101 VDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNI 160
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
VC+ L+D YGKCN+V A+ VF+ + KN VSW SM+ Y QN + ++F
Sbjct: 161 VVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSL 220
Query: 207 GVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E P +M++SV+SACA + L G+ +H A+ + + V S LVDMY KCGS+
Sbjct: 221 SSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDY 280
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
++ FN++ +++ + ++I A G +L FEEM +R PN++TLV VL AC
Sbjct: 281 SDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEM--VRKGLKPNHITLVGVLHAC 338
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP--TI 383
S +G +G+ SM KYGI P +HY CVVD+L R G +D+A+++ K M + P
Sbjct: 339 SHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKA 398
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+WGALL+A R +G+ ++ A L + +G +V LSN++A+ G E+A +R EM
Sbjct: 399 LLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEM 458
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKD-TSHERNTEIQAMLTKLREEMKAAGYIPDTN-F 501
K G+ K GCSWI +K+ +IF A + TS R E+ +L +L ++MK GY+
Sbjct: 459 KRTGVHKEPGCSWIEIKDSSYIFYAGEITSCARGDEVLCLLRELDQKMKDRGYVRGRKGL 518
Query: 502 ALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVG 561
D+EEE + +V HSE++AL FGLI+IP G+ IRI KNLR+C DCH AFK IS I+
Sbjct: 519 VFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIME 578
Query: 562 REVIVRDNNRFHRFWDGYCSCSDYW 586
RE +VRD NRFH F +G C+C+ +W
Sbjct: 579 REFVVRDINRFHHFKNGCCTCNGFW 603
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 151/347 (43%), Gaps = 10/347 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + PNDFTF KA S L G+ HA G ++ V S DMY K
Sbjct: 116 MLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCND 175
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLN 119
A +F+ M +N+ +W + I+ A+ F E P+ + ++
Sbjct: 176 VVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVIS 235
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L G+ +HG + G D + V + LVD Y KC + + VF+ I + + +
Sbjct: 236 ACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIP 295
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAV 237
+ SM+V + Q+F R+G++P + VL AC+ +GL E + ++
Sbjct: 296 YTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSH-SGLPNEGLYYLTSM 354
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQ---DAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
K + + +VDM + G + D + + P+ + W A++ G
Sbjct: 355 YEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRV 414
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
D+A + +++ + + YVTL V ++ AG +EK K+ M
Sbjct: 415 DIAAEACQQLVNSNRQVAGAYVTLSNVYAS---AGDMEKAHKLRVEM 458
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/516 (39%), Positives = 301/516 (58%), Gaps = 41/516 (7%)
Query: 39 SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
+ + DVF + Y++ G+ ++A ++FD MPERN +WNA ++ A
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVA-------------A 295
Query: 99 FINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
+I R +L + C NV+ N ++ Y +
Sbjct: 296 YIQRRMMDEAKELFN----MMPCR----------------------NVASWNTMLTGYAQ 329
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSV 218
+ AK VFD + K+ VSW +ML Y Q E Q+F+ R G + V
Sbjct: 330 AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACV 389
Query: 219 LSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
LS CA IA LE G +H ++A FVG+AL+ MY KCG+++DA AF +M ER++
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 449
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
V WN +I GYA G AL F+ M + + P+ +TLV VL+ACS +G VEKG+ F
Sbjct: 450 VSWNTMIAGYARHGFGKEALEIFDMMRTTSTK--PDDITLVGVLAACSHSGLVEKGISYF 507
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
YSM +G+ EHY C++DLLGRAG + A++++K+MP P ++WGALL A R++
Sbjct: 508 YSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRN 567
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
PELGR AA+ +F+L+P ++G +VLLSN++A++G+W +A +R M++ G+KK G SWI
Sbjct: 568 PELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIE 627
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V+N++H F A D H +I A L L MK AGY+ T+ L+DVEEEEK + +H
Sbjct: 628 VQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYH 687
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFK 554
SEK+A+A+G++ IPPG PIR+ KNLR+CGDCH+AFK
Sbjct: 688 SEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 151/360 (41%), Gaps = 48/360 (13%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
+V A + + G DA+++F MP R+ +T+NA ++ GR A F +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL-VRSGFDGNVSVCNGLVDFYGKCNEV 162
R PD ++ L+A + S L R L + VR NV ++ + V
Sbjct: 97 R----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147
Query: 163 GLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC 222
LA+ FD +K+ VSW ML YV+N E +F + V + ++S +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWG 207
Query: 223 ARIAGLEL-----GRSVHAVAVKACVEG--------------------NIFVGSALVDMY 257
EL GR V V+ V G ++F +A+V Y
Sbjct: 208 KMSEARELFDRMPGRDV--VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGY 265
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+ G +++A F+ MPERN V WNA++ Y + D A F M C V ++ T
Sbjct: 266 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP---CRNVASWNT 322
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ L+ ++AG +E+ +F +M K + +A ++ + G + ++ EM
Sbjct: 323 M---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEM 374
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N F C+ + + G QLH +++G FVG + MY K G +DA F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+EM ER++ +WN I+ G K A++ F +R T +PD IT L ACS L++
Sbjct: 442 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 501
Query: 129 LG 130
G
Sbjct: 502 KG 503
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
N + + + V A+ +F + ++ ++ +ML Y N +F R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR---- 97
Query: 210 PKDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGS----------------- 251
P ++ +++L A A + L R + + V+ V N+ + S
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA 157
Query: 252 ---------ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
++ Y + G +++A FN E +++ WNA++ GY G A F+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M + V+ ++S +R G + + ++F + ++ + VV
Sbjct: 218 RMPGR------DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT-----WTAVVSGYA 266
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP--NDSGNH 420
+ G+++ A + MP R +S W A++ A Y + + A LF + P N + +
Sbjct: 267 QNGMLEEARRVFDAMPERNAVS-WNAMVAA---YIQRRM-MDEAKELFNMMPCRNVASWN 321
Query: 421 VLLSNMFAATGRWEEADLVRKEM 443
+L+ +A G EEA V M
Sbjct: 322 TMLTG-YAQAGMLEEAKAVFDTM 343
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+E + + + + + G + DAE F MP R+ +NA++ GY+ G +A S F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF- 92
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
R P+ + +L A + + ++ +F M ++ + Y ++
Sbjct: 93 -----RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT-----YNVMISSHA 142
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
GLV A P + +S W +L A G+ E R
Sbjct: 143 NHGLVSLARHYFDLAPEKDAVS-WNGMLAAYVRNGRVEEAR 182
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 315/595 (52%), Gaps = 43/595 (7%)
Query: 30 KQLHALALKSGQIHD-----VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
KQ+H L +G ++D FV A + + ++++ D L T+N+ I
Sbjct: 26 KQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHY---SNQVLDNSQNPTLFTFNSMIR 82
Query: 85 NAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
P + + + + G PD TF + + G +HG V+ GF
Sbjct: 83 AHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGF 142
Query: 143 DGNVSVCNGLVDFYG-------------------------------KCNEVGLAKVVFDG 171
+ + V +GL+ Y K +VG A+ +FD
Sbjct: 143 EYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDK 202
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ K+ ++W +M+ YVQ + +F +REGV+ + + SVLSAC+ + L+ G
Sbjct: 203 MSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG 262
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R HA + + + +G+AL+DMY KCG++ A F M E+N+ W++ IGG A
Sbjct: 263 RWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMN 322
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + L F M + PN +T V VL CS G VE+G K F SM+ YGI+P
Sbjct: 323 GAGEKCLELFSLMKQDSVQ--PNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRL 380
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDL GRAG +D A I MP+RP + WGALLNAC++Y E+G +A+ + +
Sbjct: 381 EHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVE 440
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L+ + G +VLLSN++A + W+ VR+ M G++K GCS I V +H F D
Sbjct: 441 LEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDK 500
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH R EIQ ML ++ +K +GY+ +TN +D+EEEEK + HSEKIA+AFGLI++
Sbjct: 501 SHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISL 560
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P VPIRI KNLR+C DCH A K IS RE++VRD NRFH F DG CSC YW
Sbjct: 561 SPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 33/313 (10%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD-- 63
++P+++TF L + S+ L TG +H A+K G +D V MY++ G D
Sbjct: 107 LAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACH 166
Query: 64 -----------------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
A K+FD+M ++ WNA IS V G+ +
Sbjct: 167 RVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSRE 226
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+ F ++R G + + ++ + L+ACS L GR H ++ R+ +++ L+D
Sbjct: 227 ALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALID 286
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC + A VF G+ +KN +W S + N E ++F +++ V+P +
Sbjct: 287 MYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEIT 346
Query: 215 ISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
SVL C+ + +E GR +++ +E + +VD+YG+ G + +A N M
Sbjct: 347 FVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSM 406
Query: 274 PERNLV-CWNAII 285
P R V W A++
Sbjct: 407 PVRPHVGAWGALL 419
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE + N+ + + A S L G+ HA ++ + +G + DMY+K G
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++F M E+N+ TW++ I + G + ++ F +++ +P+ ITF + L
Sbjct: 294 MNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRG 353
Query: 121 CSDCSLLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGK 158
CS L++ GR+ + + G + + +VD YG+
Sbjct: 354 CSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGR 392
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/460 (40%), Positives = 281/460 (61%), Gaps = 1/460 (0%)
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
++LG +H ++RSGF + V N L+ Y C +V A VFD + +K+ V+W S++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
+ +N + E ++ +G++P F I S+LSACA+I L LG+ VH +K + N
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+ + L+D+Y +CG +++A+ F++M ++N V W ++I G A G A+ F+ M S
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+P +T V +L ACS G V++G + F M +Y I+P EH+ C+VDLL RAG
Sbjct: 184 TEG-LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
V +AYE IK MPM+P + +W LL AC V+G +L A + +L+PN SG++VLLSNM
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A+ RW + +RK+M G+KK G S + V NR+H F D SH ++ I A L ++
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+++ GY+P + DVEEEEK V +HSEKIA+AF LI+ P PI + KNLR+C
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH A K +S + RE++VRD +RFH F +G CSC DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 15/330 (4%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+ +H++ ++SG ++V S +Y+ G A K+FD+MPE++L WN+ I+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G+P+ A+ + + G +PD T + L+AC+ L LG+++H ++++ G N+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARREG 207
N L+D Y +C V AK +FD ++DKN VSW S++V N + ++F EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 208 VEPKDFMISSVLSACARIA----GLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+ P + +L AC+ G E R + + +E I +VD+ + G +
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMRE---EYKIEPRIEHFGCMVDLLARAGQV 243
Query: 264 QDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+ A MP + N+V W ++G G +D+A + ++ + +YV L +
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIK--PG 350
++ R V+K K L+ G+K PG
Sbjct: 304 ASEQRWSDVQKIRK----QMLRDGVKKVPG 329
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
+A + LG ++H+V +++ I+V ++L+ +Y CG + A F+KMPE++LV WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
I G+A G + AL+ + EM S + P+ T+V +LSAC++ GA+ G ++ M +K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYM-IK 117
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
G+ ++DL R G V+ A + EM + ++S W +L+ V G G+
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLIVGLAVNG---FGKE 173
Query: 405 AADNLFKLDPNDSG 418
A + LFK + G
Sbjct: 174 AIE-LFKYMESTEG 186
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ FT L A + + GK++H +K G ++ D+Y++ G
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
++A +FDEM ++N +W + I + G K AI+ F + T G P ITF L
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 199
Query: 120 ACSDCSLLQLG 130
ACS C +++ G
Sbjct: 200 ACSHCGMVKEG 210
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/561 (34%), Positives = 327/561 (58%), Gaps = 7/561 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+HA + +G +++ MY++ G +DA + D MPERN+ +W A IS
Sbjct: 54 GRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQ 113
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG--RQLHGFLVRSGFDGNV 146
RP A D FI + R G EP+ T + L +C+ + +Q+H F ++ F+ ++
Sbjct: 114 NERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHM 173
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y + + A+ VFD + ++ VS+ ++L Y + +E +F E
Sbjct: 174 FVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNE 233
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
G++ S +L+A + ++ ++ G+ VH + ++ + + + ++L+DMY KCG + +
Sbjct: 234 GMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYS 293
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSAC 325
F+ MPER++V WNA++ GY G A + F M C+ V P+ VTL+ VL
Sbjct: 294 RRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM----CDKVKPDSVTLLAVLLGY 349
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S G V++G+ +F + + +HY CV+DLLGR+G +++A +I++MP +PT ++
Sbjct: 350 SHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAI 409
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WG+LL ACRV+ +G A LF ++P ++GN+V+LSN++AA W++ +RK M
Sbjct: 410 WGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLK 469
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+ K G SW+ + IH F + + H R +I + ++ +KAAG++PD + L+D
Sbjct: 470 KTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHD 529
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V++E+K + HSEK+A+ FGL++ P + I++ KNLRIC DCH+ KF+S + GRE+
Sbjct: 530 VDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREIS 589
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD NRFH +G C+C DYW
Sbjct: 590 LRDKNRFHLITEGACTCGDYW 610
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 147/279 (52%), Gaps = 10/279 (3%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
A + C L+ GRQ+H +V +G+ + + LV Y +C + A V DG+ ++
Sbjct: 40 AAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPER 99
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG--RS 233
N VSW +M+ Y QN +F+ R G EP +F ++SVL++C G+ +
Sbjct: 100 NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQ 159
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VHA A+K E ++FVGS+L+DMY + +IQ+A F+ +P R++V + I+ GY G
Sbjct: 160 VHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGL 219
Query: 294 ADMALSSFEEMTS--MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ AL+ F ++ + M+C N VT +L+A S +++ G ++ + + L+ +
Sbjct: 220 DEEALNLFRQLYNEGMQC----NQVTFSVLLNALSGLSSMDYGKQV-HGLILRRELPFFM 274
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++D+ + G + + + MP R +S W A+L
Sbjct: 275 ALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVS-WNAML 312
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + N TF L A S L GKQ+H L L+ + + S DMYSK G
Sbjct: 233 EGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLY 292
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ ++FD MPER++ +WNA + G + F +PD +T A L S
Sbjct: 293 SRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF-RFMCDKVKPDSVTLLAVLLGYS- 350
Query: 124 CSLLQLGRQLHGFLVRSGFD 143
HG LV G D
Sbjct: 351 ----------HGGLVDEGLD 360
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/618 (34%), Positives = 331/618 (53%), Gaps = 45/618 (7%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+ T+ A + L GKQLH +++ D +V + ++Y+K G
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F + +RN +W I + G +++ F +R D ++
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV------------ 168
C + + LG QLH ++SG V V N L+ Y KC + A+++
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 169 -------------------FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GV 208
FD + +N ++W +ML Y+Q+ EE+G +M+ E V
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P ++ CA I +LG + VK + + V +A++ MY KCG I +A
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
AF+ + ++LV WNA+I GY+ G A+ F+++ + A P+Y++ V VLS CS +
Sbjct: 582 AFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDI--LNKGAKPDYISYVAVLSGCSHS 639
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G VE+G F M + I PG EH++C+VDLLGRAG + A +I EMPM+PT VWGA
Sbjct: 640 GLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGA 699
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL+AC+ +G +L +AA +LF LD SG ++LL+ M+A G+ +++ VRK M+D GI
Sbjct: 700 LLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGI 759
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
KK G SW+ V NR+H+F+A+D SH + I+ L +L E++ GY V
Sbjct: 760 KKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGY----------VRT 809
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E +E+ HHSEK+A+AFG++++P +PI I KNLRIC DCH+ K IS + RE ++RD
Sbjct: 810 ESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRD 868
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 869 GVRFHHFKGGSCSCMDYW 886
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 181/373 (48%), Gaps = 37/373 (9%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALK---------SGQIHDVFVGCSAFDM---- 54
PN FTF C+ K+ AL QL L K + D+ V C A D
Sbjct: 157 PNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQ 216
Query: 55 ------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI 96
Y+K+ D A ++F MPER++ +WN IS GR + A+
Sbjct: 217 FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREAL 276
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D +++ G PD T+ + L AC+ S L+ G+QLH ++R+ + V + +V+ Y
Sbjct: 277 DMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELY 336
Query: 157 GKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMIS 216
KC AK VF + D+N VSW ++ ++Q ++F R E + F ++
Sbjct: 337 AKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALA 396
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER 276
+++S C + LG +H++ +K+ + V ++L+ MY KCG++Q+AE+ FN M ER
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAER 456
Query: 277 NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
++V W +I Y+ G+ A F++M++ N +T +L A + GA E G+K
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMST------RNVITWNAMLGAYIQHGAEEDGLK 510
Query: 337 IFYSMTLKYGIKP 349
++ M + + P
Sbjct: 511 MYSDMLTEKDVIP 523
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 173/387 (44%), Gaps = 36/387 (9%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLIT 113
Y+K G DA ++F MP R++A+WN +S G+ NA+D F+++R+TG P+ T
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFT 161
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
F + +C ++ QL G L + + V LVD +C + A F I
Sbjct: 162 FGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMF-------------------------------LT 202
+ + SMLV Y +++ ++ ++F +
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+GV P +S L+ACAR++ LE G+ +H ++ + +V SA+V++Y KCG
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
++A+ F+ + +RN V W +IGG+ G ++ F +M + AV + L ++
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRA-ELMAVDQF-ALATLI 399
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
S C + G ++ +S+ LK G ++ + + G + A I M R
Sbjct: 400 SGCCNTMDICLGSQL-HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI 458
Query: 383 ISVWGALLNACRVYGKPELGRIAADNL 409
+S W ++ A G R D++
Sbjct: 459 VS-WTGMITAYSQVGNIAKAREFFDDM 484
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 15/268 (5%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
L+A C L R L L + NV N +++ Y K + A +F + +
Sbjct: 65 TLLHAYLSCGALSDARNL---LRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTR 121
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE-PKDFMISSVLSACARIAGLELGRSV 234
+ SW +++ Y Q+ + N +F++ R+ G P F V+ +C + E+ +
Sbjct: 122 DVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQL 181
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
+ K + + V +ALVDM +CG++ A F+++ ++C N+++ GYA
Sbjct: 182 LGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGV 241
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
D AL F+ M + V+ V+SA S++G V + + + M K G++P + Y
Sbjct: 242 DHALEIFKSMPE------RDVVSWNMVISALSKSGRVREALDMVVDMHGK-GVRPDSTTY 294
Query: 355 ACVVDLLGRAGLVDRA----YEIIKEMP 378
+ R ++ ++I+ +P
Sbjct: 295 TSSLTACARLSSLEWGKQLHVQVIRNLP 322
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 34/187 (18%)
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
E N+ + +++ Y K GS+ DA F +MP R++ WN I+ GY G AL F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
M +++PN T CV+ +C G E +++ ++ K+ + + +VD+L
Sbjct: 148 SMRQTG-DSLPNAFTFGCVMKSCGALGWHEVALQLLGLLS-KFDSQDDPDVQTALVDMLV 205
Query: 363 RAGL-------------------------------VDRAYEIIKEMPMRPTISVWGALLN 391
R G VD A EI K MP R +S W +++
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVS-WNMVIS 264
Query: 392 ACRVYGK 398
A G+
Sbjct: 265 ALSKSGR 271
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 323/561 (57%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
K++HA LK G +D F G + A S+ G + A +F ++ E +N I V
Sbjct: 48 KKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ ++ + G EPD T+ L ACS L+ G Q+H + +G + +V
Sbjct: 108 NSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVF 167
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARRE 206
V NGL+ YGKC + A VVF+ + +K+ SW S++ + + E + C M L RE
Sbjct: 168 VQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHA-SVEMWHECLMLLGDMSRE 226
Query: 207 GVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G ++ ++ S LSAC + LGR +H + ++ E N+ V ++L+DMY KCGS++
Sbjct: 227 GRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEK 286
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F M +N + +I G A G AL F +M + P+ V V VLSAC
Sbjct: 287 GLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDM--LEEGLTPDDVVYVGVLSAC 344
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG V++G + F M ++ IKP +HY C+VDL+GRAG++ AY++IK MP++P V
Sbjct: 345 SHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVV 404
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL+AC+V+ E+G IAADN+FKL+ ++ G++++L+NM+A +W +R EM +
Sbjct: 405 WRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVE 464
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+ + G S + ++ F ++D S + I M+ ++ ++K GY PD + L D
Sbjct: 465 KNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLD 524
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V+E+EK + HHS+K+A+AF LI G P+RI++NLR+C DCH+ KFIS I RE+
Sbjct: 525 VDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREIT 584
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD+NRFH F DG CSC DYW
Sbjct: 585 VRDSNRFHHFKDGTCSCKDYW 605
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 3/285 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P++FT+P + KA S L G Q+HA +G DVFV MY K G + A
Sbjct: 127 IEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAG 186
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLNACSDC 124
+F++M E+++A+W++ I + ++ R G + + L+AC+
Sbjct: 187 VVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHL 246
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
LGR +HG L+R+ + NV V L+D Y KC + VF + KN S+ M+
Sbjct: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMI 306
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACV 243
+ ++F EG+ P D + VLSAC+ ++ G + + + + +
Sbjct: 307 AGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMI 366
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+ I +VD+ G+ G +++A MP + N V W +++
Sbjct: 367 KPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSA 411
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/611 (36%), Positives = 321/611 (52%), Gaps = 34/611 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +TFP L KA + + +HA +K G + V S Y+ G A +
Sbjct: 41 PDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARAL 100
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS-L 126
E WNA IS R A +F+++ R G P +T+ + L+AC +
Sbjct: 101 LSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGD 160
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-------------- 172
+ LG Q+HG +V SG ++ V N LVD Y +C ++ A +FDG+
Sbjct: 161 VLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSG 220
Query: 173 -----------------IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI 215
+++ VSW +M+ YVQ +MF + V +F +
Sbjct: 221 LTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTM 280
Query: 216 SSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
SV++ACA++ LE+G V + ++ + FVG+AL+DMY KCGSI+ A F M
Sbjct: 281 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHH 340
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R+ W AII G A G+ + A+ F M + P+ VT + VL+AC+ AG V+KG
Sbjct: 341 RDKFTWTAIILGLAVNGYGEEAIEMFHRMIGV--SETPDEVTFIGVLTACTHAGLVDKGR 398
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+ F SM Y I P HY C++DL GRAG + A + I +MPM P ++WG LL ACRV
Sbjct: 399 EFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRV 458
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G E+G + + L ++DP +S + LLSN++A RWE+ +R + + GIKK GCS
Sbjct: 459 HGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCS 518
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
I + IH F A D SH + EI L + ++ GY PD +V EEEK +
Sbjct: 519 LIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVL 578
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+AF L++ P IRI KNLR+C DCH+A K IS + GREV+VRD RFH F
Sbjct: 579 FWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHF 638
Query: 576 WDGYCSCSDYW 586
G+CSC DYW
Sbjct: 639 RHGFCSCKDYW 649
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 144/340 (42%), Gaps = 36/340 (10%)
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
++A+ + + G PD TF L A + S R +H +V+ G N V L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
V Y + A+ + V W +++ + + C F+ R G P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 213 FMISSVLSACARIAG-LELGRSVHAVAVKACVEGNIFVGSALVDMYGKC----------- 260
SVLSAC + G + LG VH V + V ++ V +ALVDMY +C
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204
Query: 261 --------------------GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
G + +A F +MPER+ V W A+I GY AL
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM A + T+V V++AC++ GA+E G + M+ + GIK A ++D+
Sbjct: 265 FREMQCSNVSA--DEFTMVSVITACAQLGALEMGEWVRVYMS-RQGIKMDAFVGNALIDM 321
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ G ++RA ++ K+M R + W A++ V G E
Sbjct: 322 YSKCGSIERALDVFKDMHHRDKFT-WTAIILGLAVNGYGE 360
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+S ++FT + A + L G+ + + G D FVG + DMYSK G + A
Sbjct: 273 VSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERAL 332
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F +M R+ TW A I + G + AI+ F + PD +TF L AC+
Sbjct: 333 DVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAG 392
Query: 126 LLQLGRQLHGFL-VRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWC 181
L+ GR+ FL +R ++ NV ++D +G+ ++ A D + + N W
Sbjct: 393 LVDKGREF--FLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
++L + E G +T R ++P++ + ++LS
Sbjct: 451 TLLAACRVHGNSEIG--ELVTERLLQMDPENSTVYTLLS 487
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G P + +L A AR + R+VHA VK + N V ++LV Y G
Sbjct: 37 RGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAA 96
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A ++ V WNA+I G+ A SF +M R A P VT V VLSAC
Sbjct: 97 ARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMA--RAGAAPTPVTYVSVLSAC 154
Query: 326 SR-AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ G V GM++ + + G+ P +VD+ ++ A+++ M +R +S
Sbjct: 155 GKGTGDVLLGMQV-HGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVS 213
Query: 385 VWGALLNACRVYGKPELGRI-AADNLF-KLDPNDSGNHVLLSNMFAATGRWEEADLVRKE 442
W +LL+ G LGR+ A +LF ++ D+ + + + + R+ EA + +E
Sbjct: 214 -WTSLLS-----GLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFRE 267
Query: 443 MK 444
M+
Sbjct: 268 MQ 269
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 315/560 (56%), Gaps = 5/560 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ HA LK G D F + A S G D A +F +M E +N + V
Sbjct: 48 KQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHV 107
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ + + G +PD T+ L AC+ ++ G Q+H +++ G + +V
Sbjct: 108 KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 167
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ YGKC E+G+ VF+ + +++ SW +++ + + ++ EG
Sbjct: 168 VQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEG 227
Query: 208 V-EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++ ++ SVLSAC + L+LGRSVH ++ N+ V ++L++MY KCGS+
Sbjct: 228 YWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKG 287
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F KM ++N + ++ +I G A G+ L F EM E P+ + V VL+ACS
Sbjct: 288 MCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE--PDDIVYVGVLNACS 345
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG V++G++ F M L++GI+P +HY C+VDL+GRAG +D A E+IK MPM P +W
Sbjct: 346 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 405
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
+LL+A +V+ + G IAA LFKLD + ++V+LSNM+A RWE+ R M
Sbjct: 406 RSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSK 465
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G+ + G S + VK ++H F ++D H ++ + ML ++ ++K GY PDT L DV
Sbjct: 466 GLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDV 525
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+EEEK + HS+K+A+A+ LI G PIRI +NLR+C DCH+ K IS I RE+ V
Sbjct: 526 DEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITV 585
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD +RFH F DG CSC DYW
Sbjct: 586 RDRHRFHHFKDGACSCRDYW 605
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 165/355 (46%), Gaps = 9/355 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P++FT+P L KA + L G Q+HA LK G +DVFV S MY K G
Sbjct: 122 MAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGE 181
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITFCAF 117
+F++M ER++A+W+A I+ G + + ++ G E ++ +
Sbjct: 182 IGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILV--SV 239
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L+AC+ L LGR +HGFL+R+ NV V L++ Y KC + +F + KN
Sbjct: 240 LSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNK 299
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHA 236
+S+ M+ + G ++F +G+EP D + VL+AC+ ++ G + +
Sbjct: 300 LSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNR 359
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ ++ +E I +VD+ G+ G I +A MP E N V W +++ +
Sbjct: 360 MKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQ 419
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ +++ + + +YV L + + R V K +S L +PG
Sbjct: 420 AGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQ--RPG 472
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/602 (36%), Positives = 333/602 (55%), Gaps = 24/602 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN TF L A S L G+++HA + D + S YSK A
Sbjct: 323 VQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAR 382
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ + R++ +WN+ ++ + D F + +G EPD + NA S S
Sbjct: 383 EIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDS 442
Query: 126 ----LLQLGRQLHGFLVRSGFDGNVS--VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+ G+++HG+++R G VS V N ++ Y K N + A+ +F G+ +++ S
Sbjct: 443 SGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYS 502
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ Y +N + E+ +FL ++G +S +L++C R+ L+LG+ HAV
Sbjct: 503 WNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVA 562
Query: 240 KA-----CVEGN--IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
K C + + + +AL+ MY KCGSI+DA F KM +++ W A+I G AH G
Sbjct: 563 KLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHG 622
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A AL FE M + + PN VT + +L AC+ G V++G F SM YG+ P E
Sbjct: 623 LAVEALQLFERMKTDGIK--PNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIE 680
Query: 353 HYACVVDLLGRAGLVDRAYEIIKE--MPMRP----TISVWGALLNACRVYGKPELGRIAA 406
HYAC++DL GR+G DRA +++ +P +++W LL AC + +LG AA
Sbjct: 681 HYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAA 740
Query: 407 DNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIF 466
+ +L+P D ++LL+N++A++G WE+A VRK M+D G++K GCSWI NR H+F
Sbjct: 741 TKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVF 800
Query: 467 QAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAF 526
A D H + EI L +L + GY+P T L+DV+E EK +G HSEK+A++F
Sbjct: 801 VAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSF 860
Query: 527 GLI--AIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSD 584
GL+ + GV IR+ KNLR+C DCHS KF S + RE+++RD+ RFH F DG CSC D
Sbjct: 861 GLLNCGVGNGV-IRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGD 919
Query: 585 YW 586
YW
Sbjct: 920 YW 921
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 206/445 (46%), Gaps = 22/445 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E + PN F+ L K S + +QLH ++++G D + + MYS+ G+
Sbjct: 112 MMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGV 171
Query: 61 KDDADKMFDE--MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAF 117
+DA ++FDE + ++ WN+ I+ + G + F + G P +T+ +
Sbjct: 172 LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASV 231
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+NAC + G +HG ++++G + ++ N LV FYGKC + A +F+ I K+
Sbjct: 232 VNACGSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQLFERISRKDV 290
Query: 178 VSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
VSW +M+ Q E EN +F + V+P S+LSA + ++ L GR +H
Sbjct: 291 VSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIH 350
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A + +E + + ++L+ Y KC + A F ++ R+++ WN+++ GY
Sbjct: 351 AHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQG 410
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA----VEKGMKIFYSMTLKYGIKPGA 351
F+ M E P+ +L + +A SR + +G +I + + I PG
Sbjct: 411 RCFDIFKRMMLSGIE--PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR--ITPGG 466
Query: 352 EHYA---CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE-LGRIAAD 407
+ ++ + + + A +I K M R + S W A+++ K E + I D
Sbjct: 467 VSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYS-WNAMMDGYSRNAKFEDVLMIFLD 525
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGR 432
L + P D HV LS + + GR
Sbjct: 526 ILKQGFPLD---HVSLSILLTSCGR 547
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 6/330 (1%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD P R++ +W+A I+ G A F + G +P+ + + L
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDKNDVSWC 181
+ L RQLHG+ +R+GF + + + Y +C + A+ VFD ++ + + W
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
S++ Y+ + ++F GV P + +SV++AC + G VH +K
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
A +E S LV YGKCG++Q A F ++ +++V WNA+I +G + AL
Sbjct: 254 AGLEATNLWNS-LVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + PN VT + +LSA S A+ G +I ++ + ++ ++
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI-HAHIFRLSLEVDTSITNSLITF 371
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
+ V +A EI + + +R IS W ++L
Sbjct: 372 YSKCREVGKAREIFERLLLRDIIS-WNSML 400
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 12/307 (3%)
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
QL Q HGF S F S C+ + + + A+ +FD +++ +SW +++ Y
Sbjct: 39 QLEFQNHGF--SSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAY 96
Query: 188 VQ--NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
+ N+ + G +F EG++P F ++S+L + L R +H +++
Sbjct: 97 SRCGNFAQAFG--LFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGL 154
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNK--MPERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ + +A + MY +CG ++DA+ F++ + +++ WN+II Y G L F +
Sbjct: 155 DSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCK 214
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR 363
M S+ A P +T V++AC +G EK + + +K G++ + +V G+
Sbjct: 215 MVSVGVVA-PTELTYASVVNACGSSGE-EKYGAMVHGRIIKAGLE-ATNLWNSLVTFYGK 271
Query: 364 AGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLL 423
G + A ++ + + + +S W A++ A G+ E + K++P N V
Sbjct: 272 CGNLQHASQLFERISRKDVVS-WNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTF 330
Query: 424 SNMFAAT 430
++ +A
Sbjct: 331 LSLLSAV 337
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 327/605 (54%), Gaps = 32/605 (5%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK 66
+PN++T KA G +H L +++G V S +YSK G DA +
Sbjct: 316 APNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARR 375
Query: 67 MFD-EMPERNLATWNAYISNAVLGGRPKNAIDAFINL------RRTGGEPDLITFCAFLN 119
+FD R LATWNA IS G ++A+ F + +PD TF + L
Sbjct: 376 VFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLK 435
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
AC + G Q+H + SGF N + LVD Y KC + +A VF+ + KN
Sbjct: 436 ACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNA 495
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+ W +++V + Q + ++F R G ++SS++ A A +E GR VH
Sbjct: 496 IQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCY 555
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK+ ++ G+++VDMY KCG +AE F ++P RN+V W +I G G A
Sbjct: 556 GVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREA 615
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
++ FEEM + E P+ VT + +LSACS AG V++ + F + ++P AEHYAC+
Sbjct: 616 VAMFEEMRAGGVE--PDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACM 673
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG + A ++I+ MPM PT+ VW LL+ACRV+ +GR A D L +D ++
Sbjct: 674 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNP 733
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ--AKDTSHER 475
N+V LSN+FA G W E VR M+ G+KK GCSW+ + +H F + +H +
Sbjct: 734 VNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQ 793
Query: 476 NTEIQAML----TKLREEMKAAGYIP-DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
+I+ +L T++RE++ GY D FAL+DV+EE + + HSE+ LA GL
Sbjct: 794 AGDIRRVLRDVETRVREQL---GYCADDVQFALHDVDEESRAESLRAHSER--LAVGLWL 848
Query: 531 IPPGV---------PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
+ GV PIR+ KNLR+CGDCH FK +S +V R ++VRD NRFHRF G CS
Sbjct: 849 LRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCS 908
Query: 582 CSDYW 586
C DYW
Sbjct: 909 CKDYW 913
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 182/426 (42%), Gaps = 36/426 (8%)
Query: 5 CISPNDFTFPC-----------LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFD 53
C +P F FP L +AS+ G QLH K G D +G + D
Sbjct: 201 CTNPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLID 260
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLI 112
MY+K G D A ++F M +RN+ +W A + + G + +R P+
Sbjct: 261 MYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEY 320
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-G 171
T A L AC + G +HG VR+G++ + V + LV Y K +G A+ VFD
Sbjct: 321 TLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCA 380
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMF------LTARREGVEPKDFMISSVLSACARI 225
+ + +W +M+ Y + +F + +P +F +S+L AC +
Sbjct: 381 GLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGL 440
Query: 226 AGLELGRSVHAVAVKA--CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
G VHA + N + ALVDMY KCG + A F ++ +N + W
Sbjct: 441 GAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTT 500
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
++ G+A +G AL F R A + L ++ + VE+G ++
Sbjct: 501 VVVGHAQEGQVMEALELFRRF--WRSGARADAHVLSSIVGVLADFALVEQGRQVHC---- 554
Query: 344 KYGIK-PGAEHYAC---VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKP 399
YG+K P + +VD+ + GL D A + +E+P R +S W ++N GK
Sbjct: 555 -YGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVS-WTTMING---LGKH 609
Query: 400 ELGRIA 405
LGR A
Sbjct: 610 GLGREA 615
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 325/576 (56%), Gaps = 40/576 (6%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++ S Y+K G + A + FDEMPER++ +WNA S PK A++ F +
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 104 RTGGEPDLITFCAFLNACSDC-------SLLQLGRQLHGFL------------------- 137
G PD T+ +++CS S+L++ Q H L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 138 -VRSGFDG-----NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
R+ FD N N ++ Y + ++ LA+ +FD + ++ VSW SM+ Y QN
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 192 EEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E ++F ++P + I+SVLSAC I L+L V + + ++ I
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++L+ MY KCGS+ DA F M R++V +N +I G+A GH A+ M E
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P++VT + VL+ACS AG + +G +F S+ P +HYAC+VDLLGRAG +D A
Sbjct: 491 --PDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEA 543
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
+I+ MPM+P V+G+LLNA R++ + LG +AA LF+L+P + GN+VLLSN++A+
Sbjct: 544 KMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASF 603
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
GRWE+ VR+ MK G+KK G SW+ K ++H F D SHE++ +I +L +L +M
Sbjct: 604 GRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKM 663
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
K G++ D + AL DVEEEEK +G HSEK+A+ F L+ G IR+ KNLRIC DCH
Sbjct: 664 KRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCH 723
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+A K IS + GRE++VRDNNRFH F +G CSC DYW
Sbjct: 724 TAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 173/412 (41%), Gaps = 80/412 (19%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P F + L K + +G HA LK G I D F+ + DMY+K G D A
Sbjct: 96 LRPQPFVYIYLIKLAGK-----SGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLAR 150
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++M ER LA WN+ IS ++G E + + + A
Sbjct: 151 NLFEQMAERTLADWNSMISGC----------------WKSGNETEAVVLFNMMPA----- 189
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
N+ +V Y K ++ A+ FD + +++ VSW +M
Sbjct: 190 ------------------RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQS 231
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q + +F EG+ P D +S+C+ I L S+ + + +
Sbjct: 232 AYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVL 291
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNK--------------------------------M 273
N FV +AL+DM+ K G+++ A F++ M
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVE 332
P+R++V WN++I GYA G + M++ F+EM S C + P+ VT+ VLSAC GA++
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS--CMDIQPDEVTIASVLSACGHIGALK 409
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ + + IK G + ++ + + G V A+ I + M R +S
Sbjct: 410 LSYWVL-DIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVS 460
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 37/309 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDM------ 54
M E I+P+D T+ + S++ P + + + + + FV + DM
Sbjct: 249 MLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGN 308
Query: 55 --------------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
Y++ G A ++FD MP+R++ +WN+ I+
Sbjct: 309 LEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQ 368
Query: 89 GGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G +I+ F + +PD +T + L+AC L+L + + +S
Sbjct: 369 NGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGIS 428
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
N L+ Y KC V A +F + ++ VS+ +++ + N + ++ LT EG
Sbjct: 429 GFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEG 488
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+EP VL+AC+ L G++V K+ + + +VD+ G+ G + +A+
Sbjct: 489 IEPDHVTYIGVLTACSHAGLLNEGKNV----FKSIQAPTVDHYACMVDLLGRAGELDEAK 544
Query: 268 IAFNKMPER 276
+ MP +
Sbjct: 545 MLIQSMPMK 553
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 42/284 (14%)
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G H ++++ G + + N ++D Y K +V LA+ +F+ + ++ W SM+
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI----- 168
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+GC + G E + ++ +++ A NI
Sbjct: 169 -----SGCW------KSGNETEAVVLFNMMPA-----------------------RNIIT 194
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+++V Y K G ++ A F++MPER++V WNA+ YA + AL+ F +M +
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM--LEE 252
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ T V +S+CS G I + K+ I + ++D+ + G ++
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH-IVLNSFVKTALLDMHAKFGNLEI 311
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
A I E+ + W +++A GK L R DN+ K D
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD 355
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 40/356 (11%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN---D 177
S S ++ RQ HG LV + N V L++ C + D I + D
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLIN----CTRLHAHPAYVDSIFTSSPSPD 64
Query: 178 VS-WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
S + ML Y + +F + P+ F+ ++ ++AG + G HA
Sbjct: 65 ASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLI----KLAG-KSGNLFHA 119
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + F+ +A++DMY K G + A F +M ER L WN++I G G+
Sbjct: 120 YVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETE 179
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ F M + N +T +++ ++ G +E + F M + + A A
Sbjct: 180 AVVLFNMMPA------RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+ L + + E + P + W +++C G P L AD++ ++
Sbjct: 234 AQKECPKEAL--NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL----ADSILRMIDQ- 286
Query: 417 SGNHVLLSNMFAAT------GRWEEADLVRKEMKDVGIKKGAGCSW---ISVKNRI 463
H++L N F T ++ ++ R ++G ++ A +W IS R+
Sbjct: 287 --KHIVL-NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA-VTWNIMISAYTRV 338
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 325/576 (56%), Gaps = 40/576 (6%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
++ S Y+K G + A + FDEMPER++ +WNA S PK A++ F +
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 104 RTGGEPDLITFCAFLNACSDC-------SLLQLGRQLHGFL------------------- 137
G PD T+ +++CS S+L++ Q H L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 138 -VRSGFDG-----NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
R+ FD N N ++ Y + ++ LA+ +FD + ++ VSW SM+ Y QN
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 192 EEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
E ++F ++P + I+SVLSAC I L+L V + + ++ I
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
++L+ MY KCGS+ DA F M R++V +N +I G+A GH A+ M E
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
P++VT + VL+ACS AG + +G +F S+ P +HYAC+VDLLGRAG +D A
Sbjct: 491 --PDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEA 543
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
+I+ MPM+P V+G+LLNA R++ + LG +AA LF+L+P + GN+VLLSN++A+
Sbjct: 544 KMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASF 603
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
GRWE+ VR+ MK G+KK G SW+ K ++H F D SHE++ +I +L +L +M
Sbjct: 604 GRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKM 663
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
K G++ D + AL DVEEEEK +G HSEK+A+ F L+ G IR+ KNLRIC DCH
Sbjct: 664 KRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCH 723
Query: 551 SAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+A K IS + GRE++VRDNNRFH F +G CSC DYW
Sbjct: 724 TAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 173/412 (41%), Gaps = 80/412 (19%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P F + L K + +G HA LK G I D F+ + DMY+K G D A
Sbjct: 96 LRPQPFVYIYLIKLAGK-----SGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLAR 150
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F++M ER LA WN+ IS ++G E + + + A
Sbjct: 151 NLFEQMAERTLADWNSMISGC----------------WKSGNETEAVVLFNMMPA----- 189
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
N+ +V Y K ++ A+ FD + +++ VSW +M
Sbjct: 190 ------------------RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQS 231
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y Q + +F EG+ P D +S+C+ I L S+ + + +
Sbjct: 232 AYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVL 291
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNK--------------------------------M 273
N FV +AL+DM+ K G+++ A F++ M
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVE 332
P+R++V WN++I GYA G + M++ F+EM S C + P+ VT+ VLSAC GA++
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS--CMDIQPDEVTIASVLSACGHIGALK 409
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ + + IK G + ++ + + G V A+ I + M R +S
Sbjct: 410 LSYWVL-DIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVS 460
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 37/309 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDM------ 54
M E I+P+D T+ + S++ P + + + + + FV + DM
Sbjct: 249 MLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGN 308
Query: 55 --------------------------YSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
Y++ G A ++FD MP+R++ +WN+ I+
Sbjct: 309 LEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQ 368
Query: 89 GGRPKNAIDAFINLRR-TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G +I+ F + +PD +T + L+AC L+L + + +S
Sbjct: 369 NGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGIS 428
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
N L+ Y KC V A +F + ++ VS+ +++ + N + ++ LT EG
Sbjct: 429 GFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEG 488
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
+EP VL+AC+ L G++V K+ + + +VD+ G+ G + +A+
Sbjct: 489 IEPDHVTYIGVLTACSHAGLLNEGKNV----FKSIQAPTVDHYACMVDLLGRAGELDEAK 544
Query: 268 IAFNKMPER 276
+ MP +
Sbjct: 545 MLIQSMPMK 553
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 42/284 (14%)
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G H ++++ G + + N ++D Y K +V LA+ +F+ + ++ W SM+
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI----- 168
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+GC + G E + ++ +++ A NI
Sbjct: 169 -----SGCW------KSGNETEAVVLFNMMPA-----------------------RNIIT 194
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+++V Y K G ++ A F++MPER++V WNA+ YA + AL+ F +M +
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM--LEE 252
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ T V +S+CS G I + K+ I + ++D+ + G ++
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH-IVLNSFVKTALLDMHAKFGNLEI 311
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
A I E+ + W +++A GK L R DN+ K D
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD 355
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 40/356 (11%)
Query: 122 SDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN---D 177
S S ++ RQ HG LV + N V L++ C + D I + D
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLIN----CTRLHAHPAYVDSIFTSSPSPD 64
Query: 178 VS-WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
S + ML Y + +F + P+ F+ ++ ++AG + G HA
Sbjct: 65 ASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLI----KLAG-KSGNMFHA 119
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+K + F+ +A++DMY K G + A F +M ER L WN++I G G+
Sbjct: 120 YVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETE 179
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ F M + N +T +++ ++ G +E + F M + + A A
Sbjct: 180 AVVLFNMMPA------RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+ L + + E + P + W +++C G P L AD++ ++
Sbjct: 234 AQKECPKEAL--NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTL----ADSILRMIDQ- 286
Query: 417 SGNHVLLSNMFAAT------GRWEEADLVRKEMKDVGIKKGAGCSW---ISVKNRI 463
H++L N F T ++ ++ R ++G ++ A +W IS R+
Sbjct: 287 --KHIVL-NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA-VTWNIMISAYTRV 338
>gi|125586937|gb|EAZ27601.1| hypothetical protein OsJ_11548 [Oryza sativa Japonica Group]
Length = 651
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 322/590 (54%), Gaps = 18/590 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVT-------GKQLHALALKSGQI---HDVFVGCSAFDMYSK 57
P F L KA+S+ P G QLHA A+ G + + + Y+
Sbjct: 62 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFC 115
D A K+FD MP RN TWNA I GR + AI F +++R G PD TF
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181
Query: 116 AFLNACS----DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
A L+ L+LG LH ++++G + + V LV Y + AKV FD
Sbjct: 182 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 241
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ + + W SM+ YV EEE +F + ++P F+ S+V S C R+ LE+G
Sbjct: 242 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 301
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ VHA ++K+ E + + +AL+ MY CG I DA+ F+ N++ +N++I
Sbjct: 302 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQH 361
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ AL F +M +P+ VTL+ ++S+ + AG V +G+++F SM GIKP
Sbjct: 362 GYPKEALEHFRQMKF--AGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMY 419
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HYACVVD+L R+G + +A + I EMP +W +L AC + E G+ A+ LF+
Sbjct: 420 QHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE 479
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
++P ++ N++LL N++A GRW EA+ VR M + G+ K SWI + R + F D
Sbjct: 480 MEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDR 539
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + EI L +L +K AGY+PD +FA ++++ + K + +H EK+A AFG +A
Sbjct: 540 SHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAA 599
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
P G +RI KNLR+CGDCH A+K+ S + GRE+I+RDN RFH F G+CS
Sbjct: 600 PSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCS 649
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P F + +F + I GKQ+HA +LKS D + + MYS G +DA
Sbjct: 278 IKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQ 337
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F N+ ++N+ IS G PK A++ F ++ G PD +T +++ +
Sbjct: 338 KVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAG 397
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA 165
L+ G Q+ +V G +VD + E+G A
Sbjct: 398 LVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 438
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/588 (36%), Positives = 323/588 (54%), Gaps = 19/588 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
M E + P+ +TF +FKA S + + G++ H LA+ G ++ D FV DMY+K G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA +FD + ++++ + A I G A++ F ++ + +P+ T + L
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+C + L G+ +HG +V+ G + V+ L+ Y KCN V + VF+ + + V+
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S +V VQN EE MF R + P F +SS+L AC+ +A LE G +HAV V
Sbjct: 272 WTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTV 331
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K V+GN FV +AL+ +YGKCG+++ A F+ + E ++V N +I YA G AL
Sbjct: 332 KLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALE 391
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
FE + + E PN VT + +L AC+ AG VE+G +IF + + I+ +HY C++D
Sbjct: 392 LFERLKKLGLE--PNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMID 449
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRA + A +I+E P + W LLNAC+++G+ E+ + P D G
Sbjct: 450 LLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGT 508
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
H+LL+N++A+ G+W+ ++ +D+ +KK SW+ + +H F A D SH R EI
Sbjct: 509 HILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEI 568
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI-PPGVPIR 538
ML +L E++ GY PDT F L D+EEE+K++ + +HSEK+A+AF L IR
Sbjct: 569 SEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIR 628
Query: 539 ITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
I KNLR+CGD +I RD RFH F G CSC DYW
Sbjct: 629 IFKNLRVCGDY--------------IIARDAKRFHHFKGGICSCKDYW 662
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 49/460 (10%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
T K LH LKSG + F G D Y K + +A K+FDEMP R++ TWN+ IS+
Sbjct: 18 TTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSH 76
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GN 145
V G+ K AI+ + N+ G PD TF A A S+ + + G++ HG V GF+ +
Sbjct: 77 VSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSD 136
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V G+VD Y K ++ A+ VFD ++DK+ V + +++V Y Q+ + ++F
Sbjct: 137 GFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVG 196
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
++P ++ ++SVL +C + L G+ +H + VK +E + ++L+ MY KC ++D
Sbjct: 197 SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVED 256
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
+ FN + + V W + I G G ++ALS F EM MRC PN+ TL +L AC
Sbjct: 257 SIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREM--MRCSISPNHFTLSSILHAC 314
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA--------------- 370
S +E G +I +++T+K G+ A ++ L G+ G V++A
Sbjct: 315 SSLAMLEAGEQI-HAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSI 373
Query: 371 -------------------YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+E +K++ + P + + ++L AC G E G +F
Sbjct: 374 NTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGC----QIFS 429
Query: 412 LDPNDSG------NHVLLSNMFAATGRWEEADLVRKEMKD 445
L N+ ++ + ++ R+EEA ++ +E K+
Sbjct: 430 LIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKN 469
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 323/559 (57%), Gaps = 5/559 (0%)
Query: 29 GKQLHALALKSGQIHDV-FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
G+ +H ++ ++ F+G + ++Y+ TG D K+F+ + E+ + +WN IS
Sbjct: 518 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFT 577
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G+P+ A+ F+ ++ G PD + + L+AC S QLG Q+HG+++++G + N
Sbjct: 578 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDF 636
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+D Y KC V A +F+ I +K+ V+W SM+ + QN +F
Sbjct: 637 VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNC 696
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V+ SV+ AC+ + LE G+ VH + + + ++ +AL DMY KCG +Q A
Sbjct: 697 VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAH 756
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F++M ER++V W+ +I GY G + +S F +M + PN +T + +LSACS
Sbjct: 757 GVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIK--PNDITFMHILSACSH 814
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AGAVE+G F SM+ ++G++P +H+AC+VDLL RAG ++ AY+II +P S+WG
Sbjct: 815 AGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWG 873
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALLN CR++ + ++ + NL +D D+G + LLSN++A G W++ VR MK G
Sbjct: 874 ALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKG 933
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K G S I + +I+ F DTSH + +I L R + A Y + + ++
Sbjct: 934 LRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTS 993
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
+ K V HSEK+A+AFG+I PG +RI+KNLR+C DCHS K S I GRE+I+R
Sbjct: 994 KFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMR 1053
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D NRFH F +G CSC+DYW
Sbjct: 1054 DLNRFHCFRNGSCSCNDYW 1072
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 221/475 (46%), Gaps = 52/475 (10%)
Query: 16 LFKASSALHIPVTGKQLHALAL-----KSGQIHDVFVGCSAF------DMYSKTGLKDDA 64
LF H P + K + + A S ++ D F +F Y G ++A
Sbjct: 371 LFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEA 430
Query: 65 DKMFDEMPERNLATWNAYISNAVL--------------GGRPKNAIDAFINLRRTGGEPD 110
++ EM ++ + ++ +VL G+ +D F + EPD
Sbjct: 431 VSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPD 490
Query: 111 LITFCAFLNACSDCSLLQL--------GRQLHGFLVRSGFDGNVSVCN-GLVDFYGKCNE 161
+T + ACS+ L+L GR +HGF++R D + L++ Y
Sbjct: 491 SVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGN 550
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ VF+ I +K +SW +++ ++ +N + E +F+ + +G+ P + ++S LSA
Sbjct: 551 LRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSA 610
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW 281
C I+ +LG +H +K N FV +AL+DMY KCG + A F K+ E++LV W
Sbjct: 611 CGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTW 669
Query: 282 NAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM 341
N++I G++ G++ A++ F++M M C + + +T + V+ ACS G +EKG + + +
Sbjct: 670 NSMICGFSQNGYSVEAITLFDQMY-MNCVKM-DKLTFLSVIQACSHLGYLEKGKWVHHKL 727
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPEL 401
+ YG++ + + D+ + G + A+ + M R +S W ++ ++G+
Sbjct: 728 IM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAGYGMHGQIN- 784
Query: 402 GRIAADNLFK------LDPND-SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
A +LF + PND + H+L + A G EE L M + G++
Sbjct: 785 ---ATISLFNQMLGSGIKPNDITFMHILSACSHA--GAVEEGKLYFNSMSEFGVE 834
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M C+ + TF + +A S L GK +H + G D ++ + DMYSK G
Sbjct: 692 MYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGE 751
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M ER++ +W+ I+ + G+ I F + +G +P+ ITF L+A
Sbjct: 752 LQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSA 811
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEV-GLAKVVFDGIIDKNDVS 179
CS ++ G+ + G + +VD + ++ G +++ N
Sbjct: 812 CSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 871
Query: 180 WCSMLVVYVQNYEEENGCQM 199
W ++L NGC++
Sbjct: 872 WGALL----------NGCRI 881
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 314/538 (58%), Gaps = 18/538 (3%)
Query: 54 MYSKTGLKDDADKMFDE------MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG 107
++S G D+A ++F++ +PE + W A G PK A+ + + G
Sbjct: 117 LFSVCGRVDEARRVFEDGGEDVDLPE---SVWVAMGIGYSRNGYPKEALLLYYEMVCQFG 173
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLA 165
+ F L ACSD L+ GR +H ++++ D + V N L+ Y + C E L
Sbjct: 174 QLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALR 233
Query: 166 KVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARI 225
+FDG+ +N VSW S++ V+ + F + +G+ ++++L CAR+
Sbjct: 234 --MFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARV 291
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L G+ +HAV VK+ + + V ++LVDMY KCG++ FN M ++L WN +I
Sbjct: 292 TALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLI 351
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
GYA G A+ SF+EM C P+ +T + +LS CS AG + G ++F M +
Sbjct: 352 TGYAINGRMTEAMESFQEMI---CSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMD 408
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
+GI P EHYAC+VD+LGRAG + A EI+K MP +PT S+WG+LLN+CR++G L
Sbjct: 409 HGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEA 468
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
A LF+L+PN++GN+V+LSN++A G WE +VR+ M+ G+ K AGCSW+ +K++IH
Sbjct: 469 VAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIH 528
Query: 465 IFQAKDTSHERNT-EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
F A ++ RN+ E + + +L E M+ GY+PDT L+DV EE + V HSE++A
Sbjct: 529 TFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLA 588
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
F LI G+PIRITKNLR+C DCHS K +S + GR +++RD NRFH F DG CS
Sbjct: 589 TMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 2/311 (0%)
Query: 10 DFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
+F F KA S L TG+ +HA LK+ + D V + +YS+ G ++A +MFD
Sbjct: 177 NFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFD 236
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
MP RNL +WN+ I+ V AI+AF ++ G +T L C+ + L
Sbjct: 237 GMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGS 296
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G+++H +V+S + V N LVD Y KC + + VF+G+ K+ SW +++ Y
Sbjct: 297 GKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAI 356
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIF 248
N + F G P ++LS C+ + G R + + + +
Sbjct: 357 NGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVE 416
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNL-VCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+ LVD+ G+ G I++A MP + W +++ G+ +A + + + +
Sbjct: 417 HYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFEL 476
Query: 308 RCEAVPNYVTL 318
NYV L
Sbjct: 477 EPNNAGNYVML 487
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 522 IALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVG 561
+A F LI G+PIRITKNL +C DCHS K +S G
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 314/560 (56%), Gaps = 5/560 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ HA LK G D F + A S G D A +F +M E +N + V
Sbjct: 5 KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHV 64
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ + + G +PD T+ L AC+ ++ G Q+H +++ G + +V
Sbjct: 65 KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 124
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
V N L+ YGKC E+G+ VF+ + +++ SW +++ + + ++ EG
Sbjct: 125 VQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEG 184
Query: 208 V-EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
++ ++ SVLSAC + L+LGRSVH ++ N+ V ++L++MY KCG +
Sbjct: 185 YWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKG 244
Query: 267 EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACS 326
F KM ++N + ++ +I G A G+ L F EM E P+ + V VL+ACS
Sbjct: 245 MCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE--PDDIVYVGVLNACS 302
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
AG V++G++ F M L++GI+P +HY C+VDL+GRAG +D A E+IK MPM P +W
Sbjct: 303 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 362
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDV 446
+LL+A +V+ + G IAA LFKLD + ++V+LSNM+A RWE+ R M
Sbjct: 363 RSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSK 422
Query: 447 GIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV 506
G+ + G S + VK ++H F ++D H ++ + ML ++ ++K GY PDT L DV
Sbjct: 423 GLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDV 482
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
+EEEK + HS+K+A+A+ LI G P+RI +NLR+C DCH+ K IS I RE+ V
Sbjct: 483 DEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITV 542
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD +RFH F DG CSC DYW
Sbjct: 543 RDRHRFHHFKDGACSCRDYW 562
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 9/355 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + P++FT+P L KA + L G Q+HA LK G +DVFV S MY K G
Sbjct: 79 MAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGE 138
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITFCAF 117
+F++M ER++A+W+A I+ G + + ++ G E ++ +
Sbjct: 139 IGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILV--SV 196
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L+AC+ L LGR +HGFL+R+ NV V L++ Y KC + +F + KN
Sbjct: 197 LSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNK 256
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHA 236
+S+ M+ + G ++F +G+EP D + VL+AC+ ++ G + +
Sbjct: 257 LSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNR 316
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ ++ +E I +VD+ G+ G I +A MP E N V W +++ +
Sbjct: 317 MKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQ 376
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ +++ + + +YV L + + R V + +S L +PG
Sbjct: 377 AGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQ--RPG 429
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 308/568 (54%), Gaps = 14/568 (2%)
Query: 28 TGKQLHALALKSG--QIHDVFVGCSAFDMYS--KTGLKDDADKMFDEMPERNLATW--NA 81
KQ+HA AL++G H + F + + L+ + +P L + N
Sbjct: 30 AAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNT 89
Query: 82 YISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
+ A RP+ A++ RR PD T+ + AC+ L+ G LH ++G
Sbjct: 90 VLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNG 146
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
F V V N LV YG C A VFD + +N VSW SML + N +
Sbjct: 147 FVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTV 206
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F P F I SVL+ACA L LGR VH K + N V +AL+D+Y K
Sbjct: 207 FWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAK 266
Query: 260 CGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
CGS+ DA F +M R +V W ++I G A G AL F M R + VP +T+
Sbjct: 267 CGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLME--REKLVPTEITM 324
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
V VL ACS G V+ G + F M YGI P EH C+VDLLGRAG V+ AY+ I MP
Sbjct: 325 VGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMP 384
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
+ P VW LL +C ++ K ELG++A + L +LDP SG++VLLSN++AA G W + +
Sbjct: 385 LEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHV 444
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
+RK M ++K G S + ++N ++ F D SH + +I ML ++ E ++ GYIP
Sbjct: 445 LRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPR 504
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
T+ L D+EEEEK T + +HSE++A+AF L+ PG+PIRI KNLR+CGDCH AF IS
Sbjct: 505 TSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISK 564
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ RE+IVRD +RFH F G CSC DYW
Sbjct: 565 VYDREIIVRDRSRFHHFQGGACSCKDYW 592
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 5/328 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RR P+ T+P L +A + L G+ LHA A K+G + VFV S +Y GL
Sbjct: 108 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 167
Query: 62 DDADKMFDEMPER--NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+FDEMP R NL +WN+ +++ GRP + F + PD T + L
Sbjct: 168 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 227
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
AC++ L LGR++H ++ + G N V N L+D Y KC V A+ +F+ + + + V
Sbjct: 228 ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 287
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAV 237
SW S++V N + ++F RE + P + + VL AC+ ++ G R +
Sbjct: 288 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 347
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ I +VD+ G+ G +++A MP E N V W ++G A ++
Sbjct: 348 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL 407
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSA 324
++E + + +YV L + +A
Sbjct: 408 GKVAWERLVELDPGHSGDYVLLSNLYAA 435
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 309/543 (56%), Gaps = 8/543 (1%)
Query: 45 VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLR 103
+FV S MY+K G+ DDA ++F MP+RN+ +W ++ A GR K A+ + +R
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R G + TF + L AC +L +H +++ G D +V V + L+D Y K ++
Sbjct: 167 RDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
+ VFD ++ + V W S++ + Q+ + ++F+ + G ++SVL AC
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ LE+GR VHA +K + ++ + +AL+DMY KCG + DA+ F++M +R+++ W+
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWST 341
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
+I G A G + AL F+ M + PN +T+V VL ACS AG VE G F SM
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAE--GPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+GI+P EH C+VDLLGRAG +D A + I EM P +W LL ACR++ L
Sbjct: 400 LFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLAS 459
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AA + KL+P D G +LLSN++A +W A+ K M+D G+KK G SWI + +
Sbjct: 460 YAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLV 519
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H+F A + SH + I L +L K GY+P T F L D+ E+K + +HSEK+A
Sbjct: 520 HVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLA 579
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+AFG + G P+RI KNLRICGDCH+ K +S G+ +I+RD RFH F G CSC
Sbjct: 580 IAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCG 639
Query: 584 DYW 586
DYW
Sbjct: 640 DYW 642
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 15/355 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR+ ++ N +TF + A P +HA +K G DVFV S D Y K G
Sbjct: 165 MRRDGVAANSYTFSSVLGACGT---PGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGD 221
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D +FDEM +L WN+ I+ G A++ F+ ++ +G + T + L A
Sbjct: 222 LDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRA 281
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ +L++GRQ+H +++ +D ++ + N L+D Y KC + A +F + D++ +SW
Sbjct: 282 CTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISW 339
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG----RSVHA 236
+M+ QN ++F + EG P + + VL AC+ +E G RS+
Sbjct: 340 STMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHAD 295
+ ++ + +VD+ G+ G + +A +M E + V W ++G +A
Sbjct: 400 L---FGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNAT 456
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+A + E+ + E + L + + + EK K +K +PG
Sbjct: 457 LASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKK--EPG 509
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 17/357 (4%)
Query: 81 AYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL--- 137
+ S L G A+ ++ G D ++ C + C + GR +H +
Sbjct: 36 SIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLC 95
Query: 138 ---VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
G++ V N LV Y K + A +F G+ +N VSW +++ +
Sbjct: 96 AHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRK 155
Query: 195 NGCQMFLTA-RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
FL RR+GV + SSVL AC L ++HA +K ++ ++FV S+L
Sbjct: 156 KEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSL 212
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+D Y K G + F++M +LV WN+II G+A G A+ F M +
Sbjct: 213 IDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKE--SGFLA 270
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
N TL VL AC+ +E G ++ ++ LKY + H A ++D+ + G + A +
Sbjct: 271 NQGTLTSVLRACTGMVMLEVGRQV-HAHVLKYD-RDLILHNA-LLDMYCKCGCLLDADAL 327
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
M R IS W +++ G+ + + +L K + N ++ +FA +
Sbjct: 328 FSRMHDRDVIS-WSTMISGLAQNGR-SVEALKVFDLMKAEGPTPNNITMVGVLFACS 382
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/587 (36%), Positives = 322/587 (54%), Gaps = 15/587 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TG 59
M + PN+FT+ + A S++ GKQ+H+ + +G +DV VG S DMY K +
Sbjct: 308 METSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSN 367
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ +DA + F + N+ +W + I+ G + +I F ++ G P+ T L
Sbjct: 368 MIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILG 427
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC L R+LHG+++++ D +V V N LVD Y V A V + ++ ++
Sbjct: 428 ACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVIT 487
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+ S+ Q E + ++ V F ++S LSA A I +E G+ +H +V
Sbjct: 488 YTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSV 547
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K+ + I V + LVD+YGKCG I DA +F ++ E + V WN +I G A GH ALS
Sbjct: 548 KSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALS 607
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+FE+M E P+ +T + VL ACS G V+ G+ F SM K+GI+P +HY C+VD
Sbjct: 608 AFEDMRLAGVE--PDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVD 665
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
LLGRAG ++ A +I+ MP +P ++ LL AC+++G LG A +LDP+D
Sbjct: 666 LLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAF 725
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLL+N++ +GR E + R+ M++ G++K G SW+ +N +H+F A DTSH + +I
Sbjct: 726 YVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKI 785
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
+ L + + G N AL HHSEK+A+AFGLI+ PP PIRI
Sbjct: 786 HEKIESLIAQFRNQGIWYQENRAL------------AHHSEKLAVAFGLISTPPKAPIRI 833
Query: 540 TKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN+RIC DCH ++ +V RE+IVRD NRFH F G CSC YW
Sbjct: 834 IKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 214/459 (46%), Gaps = 18/459 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
PN+FT ++ SAL G + AL KSG + +G + D YSK G +A ++
Sbjct: 114 PNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRV 173
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLL 127
F+ M ++ +W +S+ V G A+ + + +TG P+ TF L A S L
Sbjct: 174 FEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-L 232
Query: 128 QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G+ +H L+ + N+ + LVD Y KC + A V ++ + W +++ +
Sbjct: 233 NYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGF 292
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
Q+ + F GV P +F S +L+AC+ I L+LG+ +H+ V A +E ++
Sbjct: 293 TQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDV 352
Query: 248 FVGSALVDMYGKCGS-IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
VG++LVDMY KC + I+DA AF + N++ W ++I G++ G + ++ F M
Sbjct: 353 SVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQG 412
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV----VDLLG 362
+ PN TL +L AC ++ + K+ Y IK A++ V VD
Sbjct: 413 VGVR--PNSFTLSTILGACGTIKSLTQTRKLH-----GYIIKNNADNDVVVGNALVDAYA 465
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
G+VD A+ + M R I+ + +L G E+ ++ K D G L
Sbjct: 466 GLGMVDDAWHVTSMMKHRDVIT-YTSLATRINQTGNHEMALNIITHMNKDDVRMDG-FSL 523
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKN 461
S + AA G K++ +K G G SWISV N
Sbjct: 524 ASFLSAAAGI--PIMETGKQLHCYSVKSGLG-SWISVSN 559
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 6/391 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + ++PN+FTF L ASS L + GK +HA + ++ + + DMY K
Sbjct: 208 MIQTGVAPNEFTFVKLLAASSFLGLNY-GKLVHAHLMMWRIELNLVLKTALVDMYCKCQS 266
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K+ E ++ W A IS + + AI AF + +G P+ T+ LNA
Sbjct: 267 IEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNA 326
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC-NEVGLAKVVFDGIIDKNDVS 179
CS L LG+Q+H +V +G + +VSV N LVD Y KC N + A F GI N +S
Sbjct: 327 CSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVIS 386
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W S++ + ++ EE ++F + GV P F +S++L AC I L R +H +
Sbjct: 387 WTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYII 446
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
K + ++ VG+ALVD Y G + DA + M R+++ + ++ G+ +MAL+
Sbjct: 447 KNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALN 506
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
M + + + +L LSA + +E G K + ++K G+ +VD
Sbjct: 507 IITHMN--KDDVRMDGFSLASFLSAAAGIPIMETG-KQLHCYSVKSGLGSWISVSNGLVD 563
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
L G+ G + A+ E+ P W L+
Sbjct: 564 LYGKCGCIHDAHRSFLEIT-EPDAVSWNGLI 593
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 183/370 (49%), Gaps = 6/370 (1%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+H+ +K G D+F+ + +Y K +A ++FDEMP R++A+W +S G
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+ A++ F ++ +G P+ T L +CS G + + +SGFD N + +
Sbjct: 97 HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
L+DFY KC A VF+ + + + VSW M+ +V+ Q++ + GV P
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPN 216
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+F +L+A + + GL G+ VHA + +E N+ + +ALVDMY KC SI+DA
Sbjct: 217 EFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSK 275
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
E ++ W AII G+ A+++F EM + VPN T +L+ACS A+
Sbjct: 276 LTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET--SGVVPNNFTYSGILNACSSILAL 333
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGR-AGLVDRAYEIIKEMPMRPTISVWGALL 390
+ G +I +S + G++ +VD+ + + +++ A + + P + W +L+
Sbjct: 334 DLGKQI-HSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVISWTSLI 391
Query: 391 NACRVYGKPE 400
+G E
Sbjct: 392 AGFSEHGLEE 401
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 110 DLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF 169
D+++FC + ++ G +H +++ GF ++ + N L+ YGKC V A+ +F
Sbjct: 21 DIVSFC-------NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLF 73
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + ++ SW ++ Y + E ++F + G P +F +S+ L +C+ +
Sbjct: 74 DEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFN 133
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G A+ K+ + N +GSAL+D Y KCG Q+A F M ++V W ++ +
Sbjct: 134 HGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFV 193
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
G AL + M ++ PN T V +L+A S G + G K+ ++ + + I+
Sbjct: 194 EAGSWSQALQLYHRM--IQTGVAPNEFTFVKLLAASSFLG-LNYG-KLVHAHLMMWRIEL 249
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+VD+ + ++ A ++ K + + + +W A+++
Sbjct: 250 NLVLKTALVDMYCKCQSIEDAVKVSK-LTLEYDVFLWTAIISG 291
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 325/596 (54%), Gaps = 16/596 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R+ I PN+FTF KA L+ G Q+H LK G V VG S DMYSK G
Sbjct: 461 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 520
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR--RTGGEPDLITFCAFL 118
++A+K+F M R+L +WNA I+ V G A+ F ++ + PD T + L
Sbjct: 521 INEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLL 580
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
ACS ++ G+Q+HGFLVRSGF + ++ LVD Y KC + A+ FD I +K
Sbjct: 581 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKT 640
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S+++ Y Q + +F + + F++SS++ A A L+ G+ + A
Sbjct: 641 MISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQA 700
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ VK V ++LVDMY KCG + +AE F +M ++++ W +I GY G
Sbjct: 701 LVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKK 760
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+S F +M +R P+ V + VLSACS +G +++G ++F + GIKP EHYAC
Sbjct: 761 AVSIFNKM--LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
VVDLLGRAG + A ++ MP++P + +W LL+ CRV+G ELG+ L ++D +
Sbjct: 819 VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKN 878
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
N+V++SN++ G W E R+ G++K AG SW+ ++ +H F++ + SH
Sbjct: 879 PANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLT 938
Query: 477 TEIQAMLT----KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA-- 530
IQ L +LREE+ GY+ L+D+++E K + HSEK+A+ L
Sbjct: 939 LVIQETLKEVERRLREEL---GYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 995
Query: 531 -IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
G IR+ KNLR+C DCH K +S I +VRD RFH F DG CSC DY
Sbjct: 996 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 206/408 (50%), Gaps = 20/408 (4%)
Query: 53 DMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLI 112
DMY K + A K+FD MPERN+ +W A +S VL G ++ F + R G P+
Sbjct: 412 DMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEF 471
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
TF L AC + L+ G Q+HGF ++ GF+ V V N LVD Y KC + A+ VF +
Sbjct: 472 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWM 531
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE--PKDFMISSVLSACARIAGLEL 230
+ ++ +SW +M+ YV F + ++ P +F ++S+L AC+ +
Sbjct: 532 VGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYA 591
Query: 231 GRSVHAVAVKA---CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
G+ +H V++ C GS LVD+Y KCG++ A AF+++ E+ ++ W+++I G
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILG 650
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI-FYSMTLKYG 346
YA +G A+ F+ + + + + ++V L ++ + +++G ++ + L G
Sbjct: 651 YAQEGDFVEAMGLFKRLQELSSQ-IDSFV-LSSIIGVFADFALLQQGKQMQALVVKLPSG 708
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAA 406
++ + +VD+ + GLVD A + EM ++ IS W ++ YGK LG+ A
Sbjct: 709 LETSVSN--SLVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVMITG---YGKHGLGKKAV 762
Query: 407 DNLFKL-----DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
K+ +P++ +LS + E +L K ++ GIK
Sbjct: 763 SIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIK 810
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 132/253 (52%), Gaps = 4/253 (1%)
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
SG N+ N L+D Y KC E +A VFD + ++N VSW +++ +V N + +
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F R+G+ P +F S+ L AC + LE G +H +K E + VG++LVDMY K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CG I +AE F M R+L+ WNA+I GY H G+ AL++F M + + P+ TL
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIK--PGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+L ACS G + G +I + ++ G A +VDL + G + A + ++
Sbjct: 578 SLLKACSSTGMIYAGKQI-HGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQI 636
Query: 378 PMRPTISVWGALL 390
+ IS W +L+
Sbjct: 637 KEKTMIS-WSSLI 648
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/584 (36%), Positives = 323/584 (55%), Gaps = 7/584 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ TF + A S L + G+++HAL G D+ + + MY++ DDA
Sbjct: 216 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F +P R++ +W+A I+ AI+ + ++ G P+ TF + L AC+
Sbjct: 276 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNG--LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GR +H ++ +G+ +++ NG LVD Y + A+ +FD I ++++ W +
Sbjct: 336 DLRAGRAVHDQILGNGY--KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVL 393
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISS-VLSACARIAGLELGRSVHAVAVKAC 242
+ Y + +++ + P +I S V+SACA + R H+
Sbjct: 394 IGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADG 453
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + + ++LV+MY + G+++ A F+KM R+ + W +I GYA G +AL ++
Sbjct: 454 MISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYK 513
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
EM E P+ +T + VL ACS AG E+G ++F S+ Y + P HY+C++DLL
Sbjct: 514 EMELEGAE--PSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLS 571
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RAG + A E+I MP+ P W +LL A R++ + AA + KLDP D ++VL
Sbjct: 572 RAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVL 631
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN+ A TG VR M G+KK G SWI V ++IH F D SH R EI A
Sbjct: 632 LSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAE 691
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L +L ++K AGY+P++ L+DV E+EK + HSEK+A+AFGLIA PG +RI
Sbjct: 692 LQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNT 751
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LRIC DCHSA KFIS I RE+IVRD++RFH+F DG CSC DYW
Sbjct: 752 LRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 200/403 (49%), Gaps = 9/403 (2%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHA-LALKSGQIHDVFVGCSAFDMYSKTGL 60
+R + PN + + A +++ GK +H+ ++ G DV + S MY+K G
Sbjct: 113 KRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA ++F+ M R++++WNA I+ G + AI + ++ EP + TF + L+A
Sbjct: 173 LEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSA 229
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS+ LL GR++H + G + ++S+ N L+ Y +C + A +F + ++ VSW
Sbjct: 230 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSW 289
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + + + + + + EGV P + +SVL ACA + L GR+VH +
Sbjct: 290 SAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILG 349
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ + G+ALVD+Y GS+ +A F+++ R+ W +IGGY+ QGH L
Sbjct: 350 NGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLEL 409
Query: 301 FEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
+ EM + VP + CV+SAC+ GA + + G+ +V+
Sbjct: 410 YREMKN--TTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVN 466
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELG 402
+ R G ++ A ++ +M R T++ W L+ +G+ L
Sbjct: 467 MYSRWGNLESARQVFDKMSSRDTLA-WTTLIAGYAKHGEHGLA 508
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 148/277 (53%), Gaps = 12/277 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+ +A C L+ RQ+H + NV + N +V YGKC V A+ FD I KN
Sbjct: 30 YRDALRQCQDLESVRQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN 88
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
D SW SML Y QN ++ +R ++P + ++VL ACA I LE G+++H+
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEGKAIHS 145
Query: 237 -VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
++ ++ ++ + ++L+ MY KCGS++DA+ F +M R++ WNA+I YA GH +
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFE 205
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A+ +E+M + P+ T VLSACS G +++G KI +++ G +
Sbjct: 206 EAIRLYEDM-----DVEPSVRTFTSVLSACSNLGLLDQGRKI-HALISSRGTELDLSLQN 259
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ + R +D A +I + +P R +S W A++ A
Sbjct: 260 ALLTMYARCKCLDDAAKIFQRLPRRDVVS-WSAMIAA 295
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 22/361 (6%)
Query: 41 QIHD---------VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
QIHD VF+G Y K G A FD + +N +W + ++ G
Sbjct: 45 QIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGH 104
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCN 150
+ A+D + +R +P+ + + L AC+ L+ G+ +H + + G +V + N
Sbjct: 105 YRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILEN 161
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y KC + AK +F+ + ++ SW +M+ Y Q+ E +++ VEP
Sbjct: 162 SLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEP 218
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+SVLSAC+ + L+ GR +HA+ E ++ + +AL+ MY +C + DA F
Sbjct: 219 SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 278
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
++P R++V W+A+I +A D+ + E + M+ E V PNY T VL AC+ G
Sbjct: 279 QRLPRRDVVSWSAMIAAFA---ETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ G + + L G K + +VDL G +D A + ++ R +W L
Sbjct: 336 DLRAGRAV-HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDE-GLWTVL 393
Query: 390 L 390
+
Sbjct: 394 I 394
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 5/299 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN +TF + A +++ G+ +H L +G + G + D+Y+ G
Sbjct: 312 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGS 371
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL-ITFCAFLN 119
D+A +FD++ R+ W I G ++ + ++ T P I + ++
Sbjct: 372 LDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVIS 431
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ RQ H + G + + LV+ Y + + A+ VFD + ++ ++
Sbjct: 432 ACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA 491
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVA 238
W +++ Y ++ E ++ EG EP + VL AC+ E G+ + ++
Sbjct: 492 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQ 551
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ NI S ++D+ + G + DAE N MP E N V W++++G A + H D+
Sbjct: 552 SDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLG--ASRIHKDV 608
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 37/207 (17%)
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE R +H + N+F+G+ +V YGKCGS+ A AF+ + +N W +++
Sbjct: 40 LESVRQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTA 98
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
YA GH AL ++ M + PN V VL AC+ A+E+G I ++ G+
Sbjct: 99 YAQNGHYRAALDLYKRM-----DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGL 153
Query: 348 K-------------------------------PGAEHYACVVDLLGRAGLVDRAYEIIKE 376
K + ++ ++G + A + ++
Sbjct: 154 KLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYED 213
Query: 377 MPMRPTISVWGALLNACRVYGKPELGR 403
M + P++ + ++L+AC G + GR
Sbjct: 214 MDVEPSVRTFTSVLSACSNLGLLDQGR 240
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 339/675 (50%), Gaps = 98/675 (14%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS----------- 56
P+ +T+P L + +A G+QLHA A+ SG DV+V + ++Y+
Sbjct: 103 PDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRV 162
Query: 57 --------------------KTGLKDDADKMFDEMPERN--------------------- 75
+ G ++A+++F+ MPERN
Sbjct: 163 FEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKAR 222
Query: 76 ------------LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
+ +W+A +S + A+ F+ ++ +G D + + L+ACS
Sbjct: 223 RIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSR 282
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD------------- 170
+++GR +HG V+ G + VS+ N L+ Y C E+ A+ +FD
Sbjct: 283 VLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNS 342
Query: 171 -------------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
+ +K+ VSW +M+ Y Q+ +F + GV P
Sbjct: 343 MISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPD 402
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ + S +SAC +A L+LG+ +HA + ++ N+ + + L+DMY KCG +++A F
Sbjct: 403 ETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFY 462
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
M E+ + WNA+I G A G + +L+ F +M + VPN +T + VL AC G V
Sbjct: 463 AMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMK--KTGTVPNEITFMGVLGACRHMGLV 520
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G F SM ++ I+ +HY C+VDLLGRAGL+ A E+I MPM P ++ WGALL
Sbjct: 521 NDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLG 580
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
ACR + E+G L +L P+ G HVLLSN++A+ G W +R M G+ K
Sbjct: 581 ACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKT 640
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
GCS I +H F A D +H + +I+ ML + ++K GY+P T+ D++EEEK
Sbjct: 641 PGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEK 700
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
T + HSEK+A+AFGLI I P PIR+TKNLRIC DCH+ K IS R+++VRD +R
Sbjct: 701 ETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHR 760
Query: 572 FHRFWDGYCSCSDYW 586
FH F G CSC D+W
Sbjct: 761 FHHFKHGACSCMDFW 775
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 157/372 (42%), Gaps = 48/372 (12%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSA--FDMYSKTGLK-DDADKMFDEMPERNLATWNAY 82
P KQL + + +G I D + F +S T + + ++F+ + N TWN
Sbjct: 16 PRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTI 75
Query: 83 I-SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
+ ++ L P A+ + + +PD T+ L C+ GRQLH V SG
Sbjct: 76 MRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSG 135
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
FDG+V V N L++ Y C VG A+ VF+ + VSW ++L YVQ E E ++F
Sbjct: 136 FDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVF- 194
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
EG+ E N ++++ ++G+ G
Sbjct: 195 ----EGMP----------------------------------ERNTIASNSMIALFGRKG 216
Query: 262 SIQDAEIAFN--KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
++ A FN + ER++V W+A++ Y + AL F EM + V +V
Sbjct: 217 CVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKG--SGVAVDEVVVV 274
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPM 379
LSACSR VE G + + + +K G++ ++ L G + A I +
Sbjct: 275 SALSACSRVLNVEMG-RWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGE 333
Query: 380 RPTISVWGALLN 391
+ W ++++
Sbjct: 334 LLDLISWNSMIS 345
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P++ A + L GK +HA ++ +V + + DMY K G
Sbjct: 394 MQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGC 453
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
++A ++F M E+ ++TWNA I + G + +++ F ++++TG P+ ITF L A
Sbjct: 454 VENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGA 513
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV- 178
C L+ GR ++ + N+ +VD G+ + A+ + D + DV
Sbjct: 514 CRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVA 573
Query: 179 SWCSMLVVYVQNYEEENG 196
+W ++L ++ + E G
Sbjct: 574 TWGALLGACRKHRDNEMG 591
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/633 (35%), Positives = 332/633 (52%), Gaps = 52/633 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ + ASS L I LH ++SG +VFVG S ++YSK G
Sbjct: 329 MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGS 388
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN- 119
DA K+F M R++ W++ I+ + GR A++ F + + IT C ++
Sbjct: 389 LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQG---ITSCYQISM 445
Query: 120 --------ACSDCSL-LQLGRQLHGFLVRS------------------------------ 140
A + C+L + ++ F +R+
Sbjct: 446 QPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAY 505
Query: 141 GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF 200
G + + Y N + A +VF+ I + W M+ + + + +++
Sbjct: 506 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565
Query: 201 -------LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
L GV P I SVL AC + L G H+ ++ E +I V +A+
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
+DMY KCGS+ A F++ ++LVCW+A+I Y GH A+ F++M ++ P
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQM--VKAGVRP 683
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
++VT CVLSACS +G +E+G F MT ++ I +YAC+VDLLGRAG + A ++
Sbjct: 684 SHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDL 743
Query: 374 IKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRW 433
I+ MP+ P S+WG+LL ACR++ +L AD+LF LDP +G HVLLSN++AA RW
Sbjct: 744 IENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRW 803
Query: 434 EEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA 493
E + VRK M G K G S + N++H F D SH + ++ A L +L MK
Sbjct: 804 NEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHL 863
Query: 494 GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAF 553
GY+P T+F L+D+EEE K + +HSE++A+AFGLI PG +RITKNLRICGDCH+A
Sbjct: 864 GYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAI 923
Query: 554 KFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K IS IV R ++VRD +RFHRF DG CSC DYW
Sbjct: 924 KLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 38/309 (12%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
QLH+ K+G +HD F +Y+K A K+FDE P N+ WN+ + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 91 RPKNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG-NVSV 148
+ + + F + T GE PD T L AC+ +L+LG+ +HGF ++ G ++ V
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ LV+ Y KC ++G A VF+ + V W SM+ Y QN + E +F
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF-------- 193
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
+ + C +G++ + ++L+++Y K G + A
Sbjct: 194 --------------------------SQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAAN 227
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F+KMPE++++ W+ +I YA+ A+ AL+ F EM R E PN VT+V L AC+ +
Sbjct: 228 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE--PNSVTVVSALQACAVS 285
Query: 329 GAVEKGMKI 337
+E+G KI
Sbjct: 286 RNLEEGKKI 294
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 40/373 (10%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDAD 65
+P++FT P KA + L + GK +H A K+ +I D+FVG + ++YSK G +A
Sbjct: 100 APDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEAL 159
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNA-------------------IDAFINLRRTG 106
K+F+E + W + ++ P+ A +++ +NL
Sbjct: 160 KVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKT 219
Query: 107 G-------------EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
G E D+I++ + ++ L ++ F+ N +
Sbjct: 220 GCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSAL 279
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+ K + + K+ VSW ++L Y QN +F +G++P
Sbjct: 280 QACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 339
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ +L+A + + + +H V++ N+FVG++L+++Y KCGS+ DA F M
Sbjct: 340 AVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 399
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEM-------TSMRCEAVPNYVTLVCVLSACS 326
R++V W+++I Y G AL F++M TS ++ V +++C+
Sbjct: 400 IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCT 459
Query: 327 RAGAVEKGMKIFY 339
A + +K FY
Sbjct: 460 LATHIPWKVKAFY 472
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/584 (36%), Positives = 323/584 (55%), Gaps = 7/584 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ TF + A S L + G+++HAL G D+ + + MY++ DDA
Sbjct: 217 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 276
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F +P R++ +W+A I+ AI+ + ++ G P+ TF + L AC+
Sbjct: 277 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 336
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNG--LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GR +H ++ +G+ +++ NG LVD Y + A+ +FD I ++++ W +
Sbjct: 337 DLRAGRAVHDQILGNGY--KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVL 394
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISS-VLSACARIAGLELGRSVHAVAVKAC 242
+ Y + +++ + P +I S V+SACA + R H+
Sbjct: 395 IGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADG 454
Query: 243 VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFE 302
+ + + ++LV+MY + G+++ A F+KM R+ + W +I GYA G +AL ++
Sbjct: 455 MISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYK 514
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLG 362
EM E P+ +T + VL ACS AG E+G ++F S+ Y + P HY+C++DLL
Sbjct: 515 EMELEGAE--PSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLS 572
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
RAG + A E+I MP+ P W +LL A R++ + AA + KLDP D ++VL
Sbjct: 573 RAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVL 632
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN+ A TG VR M G+KK G SWI V ++IH F D SH R EI A
Sbjct: 633 LSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAE 692
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L +L ++K AGY+P++ L+DV E+EK + HSEK+A+AFGLIA PG +RI
Sbjct: 693 LQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNT 752
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LRIC DCHSA KFIS I RE+IVRD++RFH+F DG CSC DYW
Sbjct: 753 LRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 13/278 (4%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+ +A C L+ RQ+H + NV + N +V YGKC V A+V FD I KN
Sbjct: 30 YRDALRQCQDLESVRQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKN 88
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
D SW SML Y QN ++ +R ++P + ++VL ACA I LE G+++H+
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEGKAIHS 145
Query: 237 -VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
++ ++ ++ + ++L+ MY KCGS++DA+ F +M R++ WNA+I YA GH
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHF 205
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+ A+ +E+M + P+ T VLSACS G +++G KI +++ G +
Sbjct: 206 EEAIRLYEDM-----DVEPSVRTFTSVLSACSNLGLLDQGRKI-HALISSRGTELDLSLQ 259
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ + R +D A +I + +P R +S W A++ A
Sbjct: 260 NALLTMYARCKCLDDAAKIFQRLPRRDVVS-WSAMIAA 296
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 23/362 (6%)
Query: 41 QIHD---------VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
QIHD VF+G Y K G A FD + +N +W + ++ G
Sbjct: 45 QIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGH 104
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGNVSVCN 150
+ A+D + +R +P+ + + L AC+ L+ G+ +H + + G +V + N
Sbjct: 105 YRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILEN 161
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+ Y KC + AK +F+ + + V SW +M+ Y Q+ E +++ VE
Sbjct: 162 SLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVE 218
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
P +SVLSAC+ + L+ GR +HA+ E ++ + +AL+ MY +C + DA
Sbjct: 219 PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI 278
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRA 328
F ++P R++V W+A+I +A D+ + E + M+ E V PNY T VL AC+
Sbjct: 279 FQRLPRRDVVSWSAMIAAFA---ETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G + G + + L G K + +VDL G +D A + ++ R +W
Sbjct: 336 GDLRAGRAV-HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDE-GLWTV 393
Query: 389 LL 390
L+
Sbjct: 394 LI 395
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 5/299 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + PN +TF + A +++ G+ +H L +G + G + D+Y+ G
Sbjct: 313 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGS 372
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL-ITFCAFLN 119
D+A +FD++ R+ W I G ++ + ++ T P I + ++
Sbjct: 373 LDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVIS 432
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ RQ H + G + + LV+ Y + + A+ VFD + ++ ++
Sbjct: 433 ACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA 492
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVA 238
W +++ Y ++ E ++ EG EP + VL AC+ E G+ + ++
Sbjct: 493 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQ 552
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ NI S ++D+ + G + DAE N MP E N V W++++G A + H D+
Sbjct: 553 SDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLG--ASRIHKDV 609
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 302/536 (56%), Gaps = 10/536 (1%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y++ G D A K FD MP+R+ + A + G + A + R D+I +
Sbjct: 242 YAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREML----RYLSAVDVIAW 297
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
A L S L R+L + V V LV+ YGKC V A+ V D +
Sbjct: 298 NALLEGYSRTGDLDEVRRLFSAMEHRTVATTV-VAGTLVNLYGKCGRVDDARRVLDAMPV 356
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ VSW +M+ Y QN +F EG EP D + SV+ +CA + L LG+ +
Sbjct: 357 RTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRI 416
Query: 235 HA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQ 291
HA + ++ + +A++ MYGKCG+++ A F +P R++V W A+I YA
Sbjct: 417 HARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQN 476
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + A+ F+EM + PN VT + VLSACS G +E+ + F SM +G+ P
Sbjct: 477 GVGEEAIELFQEMV-IDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAG 535
Query: 352 EHYACVVDLLGRAGLVDRAYEII-KEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+HY C+VDLLGRAG + A +++ + + W A L+AC++ G E + AA +
Sbjct: 536 DHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVS 595
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+L+P + VLLSN++AA GR + +R EMK G+KK AG SWI + NR+H F D
Sbjct: 596 ELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSD 655
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH R EI + L +L E+K AGY+PDT L DV+EE+K +G+HSE++A+A G+I+
Sbjct: 656 VSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIIS 715
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PPG +R+ KNLR+C DCH+A KFIS IVGR++IVRD +RFH F DG CSC DYW
Sbjct: 716 TPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 36 ALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNA 95
A++ + V + ++Y K G DDA ++ D MP R +W A I+ G A
Sbjct: 319 AMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEA 378
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG-FDGNVSVCNGLVD 154
I+ F + G EP IT + +++C+ L LG+++H + S F ++ + N ++
Sbjct: 379 INLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVIT 438
Query: 155 FYGKCNEVGLAKVVFDGII--DKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE-GVEPK 211
YGKC + LA+ VF+ + ++ V+W +M+ Y QN E ++F + G EP
Sbjct: 439 MYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPN 498
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF-VGSA------LVDMYGKCGSIQ 264
SVLSAC+ + LE C G F V A LVD+ G+ G +
Sbjct: 499 RVTFLSVLSACSHLGQLEQAWE------HFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLG 552
Query: 265 DAE--IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
+AE + +K E ++VCW A + G + + + + ++ + E V V L V
Sbjct: 553 EAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVY 612
Query: 323 SACSRAGAVEK 333
+A R V +
Sbjct: 613 AAKGRRADVAR 623
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 21/270 (7%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
+ AC+ L + LH + RS N + N L+D +GKC + A+ VF+ + N+
Sbjct: 14 IRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNE 73
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
SW ++ YV + + +F + G + F + +++A ARI L+ R +
Sbjct: 74 YSWSCIIQAYVSSSRIHDARALFDSM--PGFDA--FTWNIMIAAYARINRLDDAREL--- 126
Query: 238 AVKACVEGNIFVGSA-LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ G V A LV Y + +++A F +MP + V +++ GYAH GH
Sbjct: 127 -FHGMISGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAE 185
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVC--VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A F+ R + C +++A + V+ +F + L+ A +
Sbjct: 186 AQELFD-----RIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLR-----NAASW 235
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
+ ++ + G +D A + MP R +I+
Sbjct: 236 SLLLLTYAQNGHLDLAKKSFDRMPQRDSIA 265
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 37/349 (10%)
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-- 109
D++ K G D A +F+ + N +W+ I V R +A F ++ P
Sbjct: 49 IDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSM------PGF 102
Query: 110 DLITFCAFLNACSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
D T+ + A + + L R+L HG + SG D V LV Y + + + A +
Sbjct: 103 DAFTWNIMIAAYARINRLDDARELFHGMI--SGRD--VVSWAILVAGYARHDRLEEASAL 158
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMI-SSVLSACARIAG 227
F + + V+ S+L Y N ++F R G +D +++++A + A
Sbjct: 159 FRRMPLWDTVTCTSVLQGYAHNGHLAEAQELF--DRIGGAGDRDATACNAMIAAYGKNAR 216
Query: 228 LELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIG 286
++L + A + ++ N S L+ Y + G + A+ +F++MP+R+ + + A+
Sbjct: 217 VDLAEGLFAQIKLR-----NAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTA 271
Query: 287 GYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSM---TL 343
+ QG L EM +R + + + +L SR G +++ ++F +M T+
Sbjct: 272 VLSDQGE----LRGAREM--LRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTV 325
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+ G +V+L G+ G VD A ++ MP+R ++S W A++ A
Sbjct: 326 ATTVVAGT-----LVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAA 368
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 342/598 (57%), Gaps = 37/598 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS--------- 56
+ P+ F +P L K++ G HA LK G D FV + DMY+
Sbjct: 26 VRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAM 80
Query: 57 -----KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
K + A +FD MPERN+ TW A ++ G ++A E +
Sbjct: 81 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVT----GYAKVKDLEAARRYFDCMPERSV 136
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
+++ A L+ + L + +L ++ G N N ++ Y + ++ A+ +F+
Sbjct: 137 VSWNAMLSGYAQNGLAEEALRLFDEML--GAYRNSVTWNAMISAYMRVGDLDSARKLFNT 194
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMF---LTARREGVEPKDFMISSVLSACARIAGL 228
+ +N V+W SM+ Y QN + ++F +TA++ + P + + SV+SAC + L
Sbjct: 195 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK--LTPDEVTMVSVISACGHLGAL 252
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
ELG V + ++ +I +A++ MY +CGS++DA+ F +M R++V +N +I G+
Sbjct: 253 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 312
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A GH A++ M E P+ VT + VL+ACS AG +E+G K+F S+
Sbjct: 313 AAHGHGVEAINLMSTMKEGGIE--PDRVTFIGVLTACSHAGLLEEGRKVFESIK-----D 365
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
P +HYAC+VDLLGR G ++ A ++ MPM P V+G+LLNA R++ + ELG +AA+
Sbjct: 366 PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANK 425
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
LF+L+P++SGN +LLSN++A+ GRW++ + +R+ MK G+KK G SW+ ++H F
Sbjct: 426 LFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIV 485
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGL 528
D SHER+ +I +L +LR++M+ AGYI D + L DVEEEEK VG HSEK+A+ + L
Sbjct: 486 ADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYAL 545
Query: 529 IAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ G IR+ KNLR+C DCH+A K IS + GR +IVRDNNRFH F DG CSC DYW
Sbjct: 546 LVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 322/595 (54%), Gaps = 22/595 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T A A GKQ+H A+K G +G S +Y+K G D A +
Sbjct: 177 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRA 236
Query: 68 FDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +PE+N+ TW IS + + FI++ G P+ T + ++ C
Sbjct: 237 FWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L LG+Q+ F + G + N+ V N + Y + E A +F+ + D + ++W +M+
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISG 356
Query: 187 YVQNYEEE-----------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
Y Q + +F +R ++P F SS+LS C+ + LE G +H
Sbjct: 357 YAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K+ ++ V SALV+MY KCG IQDA AF +MP R V W ++I GY+ G
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ FEEM R V PN +T V +LSACS AG VE+ F M +Y I+P +HY
Sbjct: 477 EAIQLFEEM---RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHY 533
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++D+ R G V+ A+ IK P ++W +L+ CR +G EL AAD L +L P
Sbjct: 534 GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKP 593
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMK--DVGIKKGAGCSWISVKNRIHIFQAKDTS 472
++LL NM+ +T RW++ VRK MK DVGI + SWI++K++++ F+A D +
Sbjct: 594 KGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR--SWITIKDKVYFFRANDRT 651
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT--EVGHHSEKIALAFGLIA 530
H + TE+ +L L E+ KA GY P N L D E++EK + HHSE++A+A GL+
Sbjct: 652 HPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQ 711
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PPG +R+TKN+ +C DCHS+ K S + RE+IVRD+ R H+F DG CSC D+
Sbjct: 712 TPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 220/455 (48%), Gaps = 42/455 (9%)
Query: 21 SALHIPV-----------TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
SA+++P+ + +H K+G D+FV S + Y + G DA ++FD
Sbjct: 78 SAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFD 137
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
MPERN+ TW A ++ L +P ++ F+ + G P T A LNAC + L
Sbjct: 138 GMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDL 197
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G+Q+HG+ ++ G + S+ N L Y K + A F I +KN ++W +M+ +
Sbjct: 198 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE 257
Query: 190 NYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ E E G +F+ +GV P +F ++SV+S C L LG+ V A + K E N+
Sbjct: 258 DEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP 317
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADMA 297
V ++ + +Y + G +A F +M + +++ WNA+I GYA + A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 377
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F ++ R P+ T +LS CS A+E+G +I ++ T+K G + +
Sbjct: 378 LTIFRDLK--RSVMKPDLFTFSSILSVCSAMMALEQGEQI-HAQTIKSGFLSDVVVNSAL 434
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------ 411
V++ + G + A + EMP R T W ++++ +G+P+ A LF+
Sbjct: 435 VNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQ----EAIQLFEEMRLAG 489
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEA----DLVRKE 442
+ PN+ LLS A G EEA D+++KE
Sbjct: 490 VRPNEITFVSLLSACSYA-GLVEEAEHYFDMMKKE 523
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++R + P+ FTF + SA+ G+Q+HA +KSG + DV V + +MY+K G
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+K F EMP R TW + IS G+P+ AI F +R G P+ ITF + L+A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L++ + + +VD YG
Sbjct: 504 CSYAGLVEEAEHYFDMMKKE------YCIEPVVDHYG----------------------- 534
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
M+ ++V+ E+ F +R G EP + + SS+++ C +EL
Sbjct: 535 -CMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 581
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
Q +T EG + M +L C + L R+VH K ++FV ++LV+ Y
Sbjct: 64 QEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAY 123
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+CG+ +DA F+ MPERN+V W A++ GY + L F EM M P++ T
Sbjct: 124 MRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEM--GRYPSHYT 181
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
L L+AC + V+ G ++ + +KYG + + L + G +D A +
Sbjct: 182 LGATLNACLASCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRI 240
Query: 378 PMRPTISVWGALLNAC 393
P + I+ W +++AC
Sbjct: 241 PEKNVIT-WTTMISAC 255
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 322/595 (54%), Gaps = 22/595 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T A A GKQ+H A+K G +G S +Y+K G D A +
Sbjct: 177 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRA 236
Query: 68 FDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +PE+N+ TW IS + + FI++ G P+ T + ++ C
Sbjct: 237 FWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L LG+Q+ F + G + N+ V N + Y + E A +F+ + D + ++W +M+
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISG 356
Query: 187 YVQNYEEE-----------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
Y Q + +F +R ++P F SS+LS C+ + LE G +H
Sbjct: 357 YAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K+ ++ V SALV+MY KCG IQDA AF +MP R V W ++I GY+ G
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ FEEM R V PN +T V +LSACS AG VE+ F M +Y I+P +HY
Sbjct: 477 EAIQLFEEM---RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHY 533
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++D+ R G V+ A+ IK P ++W +L+ CR +G EL AAD L +L P
Sbjct: 534 GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKP 593
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMK--DVGIKKGAGCSWISVKNRIHIFQAKDTS 472
++LL NM+ +T RW++ VRK MK DVGI + SWI++K++++ F+A D +
Sbjct: 594 KGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR--SWITIKDKVYFFRANDRT 651
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT--EVGHHSEKIALAFGLIA 530
H + TE+ +L L E+ KA GY P N L D E++EK + HHSE++A+A GL+
Sbjct: 652 HPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQ 711
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PPG +R+TKN+ +C DCHS+ K S + RE+IVRD+ R H+F DG CSC D+
Sbjct: 712 TPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 219/455 (48%), Gaps = 42/455 (9%)
Query: 21 SALHIPV-----------TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
SA+++P+ + +H K+G D+FV S + Y + DA ++FD
Sbjct: 78 SAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFD 137
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
MPERN+ TW A ++ L +P ++ F+ + G P T A LNAC + L
Sbjct: 138 GMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDL 197
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
G+Q+HG+ ++ G + S+ N L Y K + A F I +KN ++W +M+ +
Sbjct: 198 GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAE 257
Query: 190 NYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIF 248
+ E E G +F+ +GV P +F ++SV+S C L LG+ V A + K E N+
Sbjct: 258 DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP 317
Query: 249 VGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADMA 297
V ++ + +Y + G +A F +M + +++ WNA+I GYA + A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 377
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ F ++ R P+ T +LS CS A+E+G +I ++ T+K G + +
Sbjct: 378 LTIFRDLK--RSVMKPDLFTFSSILSVCSAMMALEQGEQI-HAQTIKSGFLSDVVVNSAL 434
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK------ 411
V++ + G + A + EMP R T W ++++ +G+P+ A LF+
Sbjct: 435 VNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQ----EAIQLFEEMRLAG 489
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEA----DLVRKE 442
+ PN+ LLS A G EEA D+++KE
Sbjct: 490 VRPNEITFVSLLSACSYA-GLVEEAEHYFDMMKKE 523
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++R + P+ FTF + SA+ G+Q+HA +KSG + DV V + +MY+K G
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+K F EMP R TW + IS G+P+ AI F +R G P+ ITF + L+A
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 503
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L++ + + +VD YG
Sbjct: 504 CSYAGLVEEAEHYFDMMKKE------YCIEPVVDHYG----------------------- 534
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
M+ ++V+ E+ F +R G EP + + SS+++ C +EL
Sbjct: 535 -CMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 581
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
Q +T EG + M +L C L R+VH K ++FV ++LV+ Y
Sbjct: 64 QEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAY 123
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
+C + +DA F+ MPERN+V W A++ GY + L F EM M P++ T
Sbjct: 124 MRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEM--GRYPSHYT 181
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
L L+AC + V+ G ++ + +KYG + + L + G +D A +
Sbjct: 182 LGATLNACLASCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRI 240
Query: 378 PMRPTISVWGALLNAC 393
P + I+ W +++AC
Sbjct: 241 PEKNVIT-WTTMISAC 255
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/479 (40%), Positives = 290/479 (60%), Gaps = 3/479 (0%)
Query: 109 PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVV 168
PD +T + + AC+ L+ G+ LH + G D N+SV N ++D Y KC+++ A+ V
Sbjct: 9 PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL 228
F+ I +K+ +SW SML ++ + +F + +EP + + VLSACA+ L
Sbjct: 69 FNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128
Query: 229 ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+ G+ +H + K + ++ + +ALVDMY KCGSI A F +M RN+ WNA+IGG
Sbjct: 129 DQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGL 188
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A GH + A+S F++M + +P+ VT + +L ACS AG V++G+ +F +M K+ I+
Sbjct: 189 AMHGHGEDAISLFDQMEXDKL--MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
P EHY CVVDLL RA VD A I+ MP++ +W LL ACR G +L
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRR 306
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
+ +L+P+ G +V+LSN++A +W+ A +RK+MK+ GI+K GCSWI + IH F A
Sbjct: 307 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 366
Query: 469 KDTSHERNTEIQAMLTKLREEMKA-AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D SH + +I AM+ ++ + G++P T L+D+EEEEK + HSEK+A+A G
Sbjct: 367 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALG 426
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LI+ P G PIRI KNLR+C DCHS K S + RE++ RD +RFH F +G CSC D+W
Sbjct: 427 LISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 122/216 (56%), Gaps = 6/216 (2%)
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ + + P + + S++ ACA++ LE G+ +H+ + + ++ N+ V +A++DMY KC
Sbjct: 2 TKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDD 61
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
I+ A+ FN++ E++++ W +++ G A G+ +L+ F +M + E P+ +TLV VL
Sbjct: 62 IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIE--PDEITLVGVL 119
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
SAC++ GA+++G K + + K+ I +VD+ + G +D A ++ + M +R
Sbjct: 120 SACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-N 177
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLF--KLDPND 416
+ W A++ ++G E D + KL P+D
Sbjct: 178 VFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDD 213
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 152/336 (45%), Gaps = 5/336 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P++ T L A + L GK LH+ + + G ++ V + DMY K + A
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
++F+ + E+++ +W + +S G + ++ F ++ EPD IT L+AC+
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L G+ +H + + + ++ + LVD Y KC + LA VF + +N +W +M+
Sbjct: 127 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVE 244
+ E+ +F + + P D ++L AC+ ++ G ++ A+ K +E
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+ +VD+ + + DA MP + N V W ++G GH D+A
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRR 306
Query: 304 MTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + ++ YV L + + S+ A + K MK
Sbjct: 307 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 342
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I P++ T + A + GK +H L K D+ + + DMY+K G
Sbjct: 103 MQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGS 162
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M RN+ TWNA I + G ++AI F + PD +TF A L A
Sbjct: 163 IDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCA 222
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L+ G + + + + +VD + +V A + + I N V
Sbjct: 223 CSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV 282
Query: 179 SWCSML 184
W ++L
Sbjct: 283 LWATLL 288
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/585 (36%), Positives = 321/585 (54%), Gaps = 32/585 (5%)
Query: 32 LHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGR 91
+HA +++G D F+ SK D A ++F N+ + A I V G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 92 PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
AI + + PD + L AC L+ GR++H ++ GF N V
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187
Query: 152 LVDFYGKCNEVGLAKVVFD-------------------GIID-----------KNDVSWC 181
+++ YGKC E+G A+ VF+ G+++ K+ V W
Sbjct: 188 IMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWT 247
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+M+ +V+N E + F + E V P +F I VLSAC+++ LE+GR VH+ K
Sbjct: 248 AMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+E N+FVG+AL++MY +CGSI +A+ F++M +R+++ +N +I G + G + A+ F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M R P VT V VL+ACS G V+ G +IF+SM Y ++P EHY C+VDLL
Sbjct: 368 RVMVGRRLR--PTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLL 425
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
GR G ++ AY++I+ M M P + G LL+AC+++ ELG A L DSG +V
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV 485
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLS+++A++G+W+EA VR +MK+ G++K GCS I V N IH F D H + I
Sbjct: 486 LLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +L ++ GY P+ L D+E+ EK + HSE++A+ +GLI+ P IR+ K
Sbjct: 546 KLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMK 605
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCHSA K I+ I R+++VRD NRFH F +G CSC DYW
Sbjct: 606 NLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 31/297 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E I P+++ + KA + G+++H+ ALK G + V ++Y K G
Sbjct: 138 MLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGE 197
Query: 61 KDDADKMFDEMPERNLAT------------------------------WNAYISNAVLGG 90
DA ++F+EMPE +A+ W A I V
Sbjct: 198 LGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNE 257
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
A++AF ++ P+ T L+ACS L++GR +H ++ + + N+ V N
Sbjct: 258 ETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGN 317
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L++ Y +C + A+ VFD + D++ +++ +M+ N + ++F + P
Sbjct: 318 ALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRP 377
Query: 211 KDFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDA 266
+ VL+AC+ ++ G + H++A VE I +VD+ G+ G +++A
Sbjct: 378 TNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEA 434
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/580 (35%), Positives = 324/580 (55%), Gaps = 3/580 (0%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ TF A S+ + G+ +HA+ L+ H++ VG S MY K +DA+++
Sbjct: 346 PDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERI 405
Query: 68 FDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA-CSDCSL 126
F MP ++ + N I + + A+ F +RR + + IT L + S L
Sbjct: 406 FQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDL 465
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
G LH + + +GF + V N L+ Y KC ++ + VF II+++ VSW +M+
Sbjct: 466 RNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAA 525
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
VQ+ E ++F+ R +G ++ +S+ A +A LE G +H + +K + +
Sbjct: 526 NVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGND 585
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
V +A +DMYGKCG + + R CWN +I GYA G+ A +F+ M S
Sbjct: 586 SHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMIS 645
Query: 307 MRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGL 366
+ P+YVT V +LSACS AG V+KG+ + SM+ +G+ PG +H C+VD+LGR G
Sbjct: 646 V--GRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGR 703
Query: 367 VDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNM 426
A + I++MP+ P +W +LL++ R + ++GR AA L +LDP D +VLLSN+
Sbjct: 704 FAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNL 763
Query: 427 FAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKL 486
+A + RW + D VR MK + + K CSW+ K + F D SH+ +I L ++
Sbjct: 764 YATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEI 823
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
+++ GY+ DT+ AL+D +EE+K + +HSEK+ALA+GLI +P G +RI KNLR+C
Sbjct: 824 LLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVC 883
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH FK +S + RE+++RD RFH F G CSCSD+W
Sbjct: 884 ADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 185/401 (46%), Gaps = 4/401 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE I+ N F + +L V G Q+ + + SG V V S M G
Sbjct: 136 MRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGR 195
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG-GEPDLITFCAFLN 119
DA+K+F M ER+ +WNA +S G + F ++RR G D T C+ ++
Sbjct: 196 VHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLIS 255
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C+ + G +H +R+G + V N LV+ Y ++ A+ +F + ++ +S
Sbjct: 256 VCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLIS 315
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
W +M+ YVQN + + P SS L AC+ L GR VHA+ +
Sbjct: 316 WNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTL 375
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+ + N+ VG++L+ MYGKC SI+DAE F MP ++V N +IG YA A+
Sbjct: 376 QLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQ 435
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M R E NY+T+V +L + + + + ++ T+ G ++
Sbjct: 436 VFFWMR--RGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLIT 493
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+ + G ++ + + + + R +S W A++ A +G E
Sbjct: 494 MYAKCGDLESSNNVFQRIINRSVVS-WNAMIAANVQHGHGE 533
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 10/401 (2%)
Query: 1 MRRECISPNDFTFPC-LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MRR + +D T C L ++ G +H+L L++G + V + +MYS G
Sbjct: 237 MRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAG 296
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA+ +F M R+L +WN IS+ V G +A+ L T PD +TF + L
Sbjct: 297 KLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALG 356
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
ACS L GR +H ++ N+ V N L+ YGKCN + A+ +F ++ +DV
Sbjct: 357 ACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQ-LMPNHDVV 415
Query: 180 WCSMLV-VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE-LGRSVHAV 237
C++L+ Y + Q+F RR V+ I ++L + L G +HA
Sbjct: 416 SCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAY 475
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
+ A + +V ++L+ MY KCG ++ + F ++ R++V WNA+I GH + +
Sbjct: 476 TIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEES 535
Query: 298 LSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
L F + MR + +++ L +S+ + ++E+GM++ + + LK G+ +
Sbjct: 536 LKLFMD---MRHDGNGLDHICLAECMSSSASLASLEEGMQL-HGLGLKCGLGNDSHVVNA 591
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+D+ G+ G +D +++ + +RP W L++ YG
Sbjct: 592 AMDMYGKCGKMDEMLKMLPDPAIRPQ-QCWNTLISGYARYG 631
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 169/357 (47%), Gaps = 4/357 (1%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G +HAL K+G + +V++G + +Y DA ++F EMPERN+ +W A +
Sbjct: 63 GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G + A+ + +RR + F ++ C G Q+ ++ SG VSV
Sbjct: 123 NGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSV 182
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N L+ G V A+ +F + +++ VSW +++ +Y ++F RR G+
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242
Query: 209 EPKD-FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
D + S++S CA + G VH++ ++ + I V +ALV+MY G + DAE
Sbjct: 243 LRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAE 302
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F M R+L+ WN +I Y G+ AL + ++ + P+ +T L ACS
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQL--LHTNEGPDRMTFSSALGACSS 360
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTIS 384
GA+ G ++ ++MTL+ + ++ + G+ ++ A I + MP +S
Sbjct: 361 PGALMDG-RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVS 416
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 10/327 (3%)
Query: 71 MPE--RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
MP+ R ++W IS V GR A +R G + + AC +
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 129 L-GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY 187
G +H ++G NV + L+ YG V A+ +F + ++N VSW +++V
Sbjct: 61 ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120
Query: 188 VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
N E + RRE + ++V+S C + G V + + + ++ +
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQV 180
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
V ++L+ M G G + DAE F +M ER+ V WNA++ Y+H+G + SF + M
Sbjct: 181 SVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEG---LCSKSFRVFSDM 237
Query: 308 RCEAVPNY--VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAG 365
R + + TL ++S C+ + V G + +S+ L+ G+ +V++ AG
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGV-HSLCLRTGLHSYIPVVNALVNMYSSAG 296
Query: 366 LVDRAYEIIKEMPMRPTISVWGALLNA 392
+ A + M R IS W ++++
Sbjct: 297 KLADAEFLFWNMSRRDLIS-WNTMISS 322
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/509 (39%), Positives = 304/509 (59%), Gaps = 3/509 (0%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLITFCAFLNACSDCSLLQLGRQLHGFL 137
+NA IS G + A+ F +R G P D TF LN+ + + LH L
Sbjct: 9 YNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALHALL 68
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
+R+G ++ V N LVD Y K + G A+ +FD + ++ V+W S+L ++ +
Sbjct: 69 LRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAAL 128
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+++ GVEP ++++++ LS+CA LELG+SVHA AV+ +E + VG++LV MY
Sbjct: 129 RVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMY 188
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
K GS+++A F+ R V W A+I GYA G + +L + EM C P+YVT
Sbjct: 189 AKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCR--PDYVT 246
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
+ +L ACS AG V+ G F SM +GI PG +HYAC+VD+LGRAG +D A E++ +
Sbjct: 247 FIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQS 306
Query: 378 PMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEAD 437
M+ +VW ALL ACR + EL AA+ +++LDP D+ +++LSN+++ RW +
Sbjct: 307 TMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVA 366
Query: 438 LVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIP 497
+R MK GI K GCSW+ H+F +D H R EI + ++ E+++A G++
Sbjct: 367 RIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVA 426
Query: 498 DTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFIS 557
DT++AL D E + + HHSE++A+AFGL+A+P G P+R+ KNLR+CGDCH A K ++
Sbjct: 427 DTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVA 486
Query: 558 GIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ GRE+I+RD+N FH DG CSC DYW
Sbjct: 487 KVYGREIILRDSNCFHHMRDGVCSCGDYW 515
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 159/319 (49%), Gaps = 10/319 (3%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ +++TFP + +++ L +P LHAL L++G + + V + D Y+K A
Sbjct: 38 LPADEYTFPPILNSAALLRVPAAADALHALLLRAGLVAHLHVANALVDAYAKLSRGGAAR 97
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FDEMP R++ TW + ++ G A+ + ++ +G EPD A L++C+ +
Sbjct: 98 ALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGST 157
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L+LG+ +H VR G + +SV N LV Y K + A+ VFD + V+W +++V
Sbjct: 158 TLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIV 217
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEG 245
Y QN E Q++ G P +L AC+ ++ GR+ H +++A +
Sbjct: 218 GYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGRA-HFKSMQA--DH 274
Query: 246 NIFVG----SALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
I G + +VD+ G+ G + +A E+ + + W A++G +A++A +
Sbjct: 275 GITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALLGACRTHRNAELAERA 334
Query: 301 FEEMTSM-RCEAVPNYVTL 318
E + + +AVP Y+ L
Sbjct: 335 AEMVWRLDPTDAVP-YIML 352
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/560 (36%), Positives = 318/560 (56%), Gaps = 7/560 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD---ADKMFDEMPERNLATWNAYISNAV 87
Q+ A A+KS I DV + +++ + A +F+ M E ++ +N+
Sbjct: 47 QIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P F+ + G PD TF + L AC+ L+ GRQLH ++ G D NV
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
VC L++ Y +C +V A+ VFD I++ V + +M+ Y + +F + +
Sbjct: 166 VCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++P + + SVLS+CA + L+LG+ +H A K + V +AL+DM+ KCGS+ DA
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F KM ++ W+A+I YA+ G A+ ++ FE M S + P+ +T + +L+ACS
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ--PDEITFLGLLNACSH 343
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G VE+G K F M K+GI P +HY +VDLL AG ++ AYE I ++P+ PT +W
Sbjct: 344 TGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWR 403
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
LL AC + +L ++ +F+LD + G++V+LSN++A +WE D +RK MKD
Sbjct: 404 ILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRK 463
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY-DV 506
K GCS I V N +H F + D T++ L ++ +E+K +GY+PDT+ ++ ++
Sbjct: 464 AVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANM 523
Query: 507 EEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIV 566
++EK + +HSEK+A+ FGL+ PPG IR+ KNLR+C DCH+A K IS I GR+V+
Sbjct: 524 NDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVX 583
Query: 567 RDNNRFHRFWDGYCSCSDYW 586
RD RFH F DG CSC D+W
Sbjct: 584 RDVQRFHHFEDGKCSCGDFW 603
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 2/315 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+++TFP L KA + G+QLH L++K G +V+V + +MY++ D A
Sbjct: 125 ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+FD + E + +NA I+ RP A+ F ++ +P+ IT + L++C+
Sbjct: 185 XVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG 244
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
L LG+ +H + + F V V L+D + KC + A +F+ + K+ +W +M+V
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVE 244
Y + + E MF R E V+P + +L+AC+ +E GR + V K +
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
+I ++VD+ G+++DA +K+P + W ++ + + D+A E
Sbjct: 365 PSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 304 MTSMRCEAVPNYVTL 318
+ + +YV L
Sbjct: 425 IFELDDSHGGDYVIL 439
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + + PN+ T + + + L GK +H A K V V + DM++K G
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DDA +F++M ++ W+A I G+ + ++ F +R +PD ITF LNA
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 121 CSDCSLLQLGRQLHGFLV 138
CS ++ GR+ +V
Sbjct: 341 CSHTGRVEEGRKYFSQMV 358
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 322/595 (54%), Gaps = 22/595 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T A A GKQ+H A+K G +G S +Y+K G D A +
Sbjct: 137 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRA 196
Query: 68 FDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +PE+N+ TW IS + + FI++ G P+ T + ++ C
Sbjct: 197 FWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 256
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L LG+Q+ F + G + N+ V N + Y + E A +F+ + D + ++W +M+
Sbjct: 257 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISG 316
Query: 187 YVQNYEEE-----------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
Y Q + +F +R ++P F SS+LS C+ + LE G +H
Sbjct: 317 YAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 376
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K+ ++ V SALV+MY KCG IQDA AF +MP R V W ++I GY+ G
Sbjct: 377 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 436
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ FEEM R V PN +T V +LSACS AG VE+ F M +Y I+P +HY
Sbjct: 437 EAIQLFEEM---RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHY 493
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C++D+ R G V+ A+ IK P ++W +L+ CR +G EL AAD L +L P
Sbjct: 494 GCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKP 553
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMK--DVGIKKGAGCSWISVKNRIHIFQAKDTS 472
++LL NM+ +T RW++ VRK MK DVGI + SWI++K++++ F+A D +
Sbjct: 554 KGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR--SWITIKDKVYFFRANDRT 611
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT--EVGHHSEKIALAFGLIA 530
H + TE+ +L L E+ KA GY P N L D E++EK + HHSE++A+A GL+
Sbjct: 612 HPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQ 671
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PPG +R+TKN+ +C DCHS+ K S + RE+IVRD+ R H+F DG CSC D+
Sbjct: 672 TPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 198/402 (49%), Gaps = 31/402 (7%)
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
DA ++FD MPERN+ TW A ++ L +P ++ F+ + G P T A LNAC
Sbjct: 91 DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCS 182
+ LG+Q+HG+ ++ G + S+ N L Y K + A F I +KN ++W +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210
Query: 183 MLVVYVQNYE-EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
M+ ++ E E G +F+ +GV P +F ++SV+S C L LG+ V A + K
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH----------- 290
E N+ V ++ + +Y + G +A F +M + +++ WNA+I GYA
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
+ AL+ F ++ R P+ T +LS CS A+E+G +I ++ T+K G
Sbjct: 331 RSRGFQALTIFRDLK--RSVMKPDLFTFSSILSVCSAMMALEQGEQI-HAQTIKSGFLSD 387
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
+ +V++ + G + A + EMP R T W ++++ +G+P+ A LF
Sbjct: 388 VVVNSALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQ----EAIQLF 442
Query: 411 K------LDPNDSGNHVLLSNMFAATGRWEEA----DLVRKE 442
+ + PN+ LLS A G EEA D+++KE
Sbjct: 443 EEMRLAGVRPNEITFVSLLSACSYA-GLVEEAEHYFDMMKKE 483
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++R + P+ FTF + SA+ G+Q+HA +KSG + DV V + +MY+K G
Sbjct: 344 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 403
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+K F EMP R TW + IS G+P+ AI F +R G P+ ITF + L+A
Sbjct: 404 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSA 463
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS L++ + + +VD YG
Sbjct: 464 CSYAGLVEEAEHYFDMMKKE------YCIEPVVDHYG----------------------- 494
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
M+ ++V+ E+ F +R G EP + + SS+++ C +EL
Sbjct: 495 -CMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELA 541
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A+ EG + V + + +DA F+ MPERN+V W A++ GY +
Sbjct: 66 AMTMLTEGKAVQSAMYVPLLHRAA--RDARRLFDGMPERNVVTWTALVTGYTLNSQPALG 123
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L F EM M P++ TL L+AC + V+ G ++ + +KYG + +
Sbjct: 124 LEVFVEMLEM--GRYPSHYTLGATLNACLASCDVDLGKQV-HGYAIKYGAESITSMGNSL 180
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
L + G +D A +P + I+ W +++AC
Sbjct: 181 CSLYAKLGSLDSALRAFWRIPEKNVIT-WTTMISAC 215
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 314/551 (56%), Gaps = 11/551 (1%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D F+ + Y+ G A ++FDE P +N+ WNA + L A+ ++
Sbjct: 107 DPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLADMG 166
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLG-----RQLHGFLVRSGFDGNVSVCNGLVDFYGK 158
R G D ++ L AC S R++H +R G+ + V L+D Y K
Sbjct: 167 RLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAK 226
Query: 159 CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTARREGVEPKDFMIS 216
V A+ VF + ++N VSW +M+ Y +N + ++F + A + P I
Sbjct: 227 LGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIV 286
Query: 217 SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PE 275
SVL+ACA + L G+ +HA ++ + + V +AL+ MY +CG ++ F +
Sbjct: 287 SVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHR 346
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R++V WN++I GY G A+ FEEM + P+ +T + VL ACS AG V +G
Sbjct: 347 RDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFS--PSIITFISVLGACSHAGLVNEGK 404
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
+F SM ++YG+ P AEHYAC+VDLLGRAG +D A E+I+ M + P+ VWGALL ACR+
Sbjct: 405 MLFESM-VEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRI 463
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+G E IA +LF L+P ++GN+VLL++++A + ++++ +++ ++K GCS
Sbjct: 464 HGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGCS 523
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
WI VK ++H F + D + ++QA++ + +MK GY+PDT LYD+E EEK +
Sbjct: 524 WIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERIL 583
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+AFGLI G IRITKNLR+C DCHS KFIS RE++VRD NRFH F
Sbjct: 584 IGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHHF 643
Query: 576 WDGYCSCSDYW 586
DG CSC DYW
Sbjct: 644 RDGVCSCGDYW 654
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 19 ASSALHIPVTGK--QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNL 76
A SA H P + + ++HA A++ G V + D Y+K G+ A+ +F MPERN+
Sbjct: 186 AVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNV 245
Query: 77 ATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFCAFLNACSDCSLLQLGRQLH 134
+W+A I RP +AI+ F ++ + + P+ IT + LNAC+ + L G+ LH
Sbjct: 246 VSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLH 305
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEE 193
+++R GFD VSV N L+ Y +C + + + +F I + D VSW S++ Y +
Sbjct: 306 AYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFG 365
Query: 194 ENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSAL 253
Q+F G P SVL AC+ + G+ + V+ V + +
Sbjct: 366 PEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACM 425
Query: 254 VDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
VD+ G+ G + +A E+ + E + W A++G GH + A + + +
Sbjct: 426 VDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNA 485
Query: 313 PNYVTL 318
NYV L
Sbjct: 486 GNYVLL 491
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN T + A + ++ GK LHA L+ G V V + MY + G +
Sbjct: 278 LVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGR 337
Query: 66 KMFDEM-PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+F + R++ +WN+ IS + G A+ F + G P +ITF + L ACS
Sbjct: 338 HIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHA 397
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCSM 183
L+ G+ L +V G +VD G+ ++ A + + I+ + W ++
Sbjct: 398 GLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGAL 457
Query: 184 L 184
L
Sbjct: 458 L 458
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/517 (39%), Positives = 292/517 (56%), Gaps = 11/517 (2%)
Query: 79 WNAYI-----SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
WN I + A G + I F+ +R G +PD TF L + + SLL LGR +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H ++R G + V L+ Y V +A+ +F + ++N +SW M+ YV+ +
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 194 ENGCQMFLTARREGV---EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
+ +F + GV P +F +S VL+AC R+ LE G+ HA K + ++ +G
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206
Query: 251 SALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+AL+DMY KCGS++ A F+ + P ++++ W+A+I G A G A+ + F +M +
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV 266
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
PN VT + V AC G V +G MT Y I P +HY C+VDL GRAG +
Sbjct: 267 R--PNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKE 324
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A+ ++K MPM P + VWGALL+ R++G E +A L +L+P +SG +VLLSN++A
Sbjct: 325 AWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAK 384
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
GRWE+ VR M+ +GIKK GCS I V +H F D SH +I ML ++ E
Sbjct: 385 RGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILER 444
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+K GY+ +T L D++EE K + HSEK+ALA+G + PG PIRI KNLRIC DC
Sbjct: 445 LKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDC 504
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
H A K IS + RE+IVRD NRFH F G CSC DYW
Sbjct: 505 HVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 155/353 (43%), Gaps = 12/353 (3%)
Query: 1 MRRECISPNDFTFPCL---FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
MR + P+ TFP L F + S LH+ G+ +HA L+ G D FV S MYS
Sbjct: 55 MRFHGVQPDFHTFPFLLQSFASPSLLHL---GRSVHAQILRFGLAIDPFVQTSLISMYSS 111
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITF 114
+GL D A +F MPERN+ +W+ I+ V G+ K A+ F ++ G P+ T
Sbjct: 112 SGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 171
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L AC L+ G+ H ++ + G +V + L+D Y KC V A VF +
Sbjct: 172 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 231
Query: 175 KNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
DV +W +M+ + E +F +GV P +V AC + G+
Sbjct: 232 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 291
Query: 234 -VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQ 291
+ + + I +VD+YG+ G I++A MP E +++ W A++ G
Sbjct: 292 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 351
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
G + + +++ + YV L V + R V + +M +K
Sbjct: 352 GDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 404
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 298/530 (56%), Gaps = 2/530 (0%)
Query: 57 KTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
K G A ++FD+MP RN+ATWNA ++ G ++++ F+ +RR G PD +
Sbjct: 120 KNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGS 179
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
C+ + GRQ+H ++VRSG D ++ V N L Y +C + + V +
Sbjct: 180 VFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLT 239
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
VS+ + + QN + E + F R V P S +S C+ +A L G+ VHA
Sbjct: 240 IVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHA 299
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+KA V+ + V ++LV MY +CG + D+E ++ +L +A+I G
Sbjct: 300 QVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHK 359
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ F++M M A PN VT + +L ACS +G ++G++ F MT YG +P +HY C
Sbjct: 360 AVELFKQM--MNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNC 417
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGR+G +D A +I MP+R +W LL+AC+ ++ A+ + + DP D
Sbjct: 418 IVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRD 477
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
S +VLLSN+ A + RW + VRK M++ I+K G SW+ K ++H F D SH R
Sbjct: 478 SAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQ 537
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI L ++ +++ GY PD +D+E+EEK + HHSEK+A+AF + +P GVP
Sbjct: 538 GEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVP 597
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IR+ KNLR+C DCH A K IS + GRE++VRD +RFH F DG CSC DYW
Sbjct: 598 IRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 175/388 (45%), Gaps = 16/388 (4%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRRE + P++F +F+ + L V+G+Q+HA ++SG D+ VG S MY + G
Sbjct: 165 MRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGC 224
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + + +P + ++N I+ G + A++ F +R PD++TF + ++
Sbjct: 225 LAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISC 284
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CSD + L G+Q+H ++++G D V V LV Y +C +G ++ V+DG +
Sbjct: 285 CSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLL 344
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ + + ++F G EP + ++L AC+ + G + K
Sbjct: 345 SAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTK 404
Query: 241 AC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMAL 298
+ ++ + +VD+ G+ G + +AE MP R + V W ++ Q + DMA
Sbjct: 405 TYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAE 464
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE------ 352
E + YV L + + R G V + KI ++ +PG
Sbjct: 465 RIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRK--EPGVSWVEHKG 522
Query: 353 --HYACVVDLLG-RAGLVDRAYEIIKEM 377
H C D R G +D E +KEM
Sbjct: 523 QVHQFCTGDKSHPRQGEID---EYLKEM 547
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 328/577 (56%), Gaps = 8/577 (1%)
Query: 13 FPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDM--YSKTGLKDDADKMFDE 70
+ CL K +L KQ+H LK G D F S S D A +F +
Sbjct: 35 YLCLVKKCKSLE---EFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQ 91
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG 130
+ E +N I V +NAI + ++ + EPD T+ L AC+ +++Q G
Sbjct: 92 LDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEG 151
Query: 131 RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN 190
Q+HG + + G + +V V N L++ YGKC ++ ++ +F + K+ SW +++ +
Sbjct: 152 MQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASL 211
Query: 191 YEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+F REG ++ ++ +VLSAC + LGR H +K E N+ V
Sbjct: 212 AMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAV 271
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
++L+DMY KCGS+Q F M +N + ++ II G G+ AL F EM
Sbjct: 272 MTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGL 331
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
E P+ VT V VLSACS +G V++G+ +F M +Y I+P +HY C+VDL GRAGL++
Sbjct: 332 E--PDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEE 389
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A+++++ MP++ +W +LL+AC+V+ +LG IAA+NLF+L ++ ++++LSNM+A
Sbjct: 390 AFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYAR 449
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
+WE A +R +M + G+ + G S + VK++++ F ++D S+ ++ I M+ ++ +
Sbjct: 450 AQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQ 509
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
++ GY+PDT+ + DV+EEEK + HS+K+A+AF LI G IRI +NLR+C DC
Sbjct: 510 LRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDC 569
Query: 550 HSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
HS K +S I RE+ VRD NRFH F DG CSC DYW
Sbjct: 570 HSYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 8/292 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++RE + P++FT+P + KA + L + G Q+H K G DV+V S +MY K
Sbjct: 124 LQRE-VEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRD 182
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTG---GEPDLITFCAF 117
+ + +F M ++++A+W+A I+ + F ++ R G E ++
Sbjct: 183 IEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILV--NV 240
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
L+AC+ LGR HG L+++ + NV+V L+D Y KC + +F + KN
Sbjct: 241 LSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQ 300
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-A 236
+S+ ++ + Q+F EG+EP D SVLSAC+ ++ G +
Sbjct: 301 LSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDK 360
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGG 287
+ + +E + +VD+ G+ G +++A MP + N V W +++
Sbjct: 361 MKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSA 412
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 319/590 (54%), Gaps = 35/590 (5%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
+Q+H LK+G I D AF +G A +FD + N WN I
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+ A+ + ++ + TF L ACS S L+ +Q+H +++ GF +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE------------- 194
N L++ Y K ++ A+++FD + ++ VSW SM+ Y + E E
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 195 --------NGC----------QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+GC +F + G++ + + S L ACA + L+ G+ +HA
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHA 274
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
K +E + +G L+DMY KCG +++A F KM E+ + W A+I GYA G
Sbjct: 275 YIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F +M + E PN +T +L+ACS AG V + +F SM +G KP EHY C
Sbjct: 335 ALEWFMKMQTAGVE--PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAGL+ A E+I+ MP++P ++WGALLNAC ++G ELG+ L ++DP
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGH 452
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G ++ L+++ AA G W +A VR++MK+ G+ K GCS ISV H F A D SH +
Sbjct: 453 GGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQI 512
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI ML ++ E ++ GY P L D+E++EK T + HHSEK+A+ FGLI+ PG+
Sbjct: 513 KEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMT 572
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+C DCH+ K IS + RE+++RD RFH F DG C+C DYW
Sbjct: 573 IRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 35/319 (10%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG- 59
M + N +TFP L KA S++ +Q+HA +K G +++ S ++YSK+G
Sbjct: 109 MLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGD 168
Query: 60 ------LKDDADK------------------------MFDEMPERNLATWNAYISNAVLG 89
L D D+ +F+ MPERN+ +W + IS V
Sbjct: 169 IKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGA 228
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+PK A++ F ++ G + D + + L AC+D +L G+ +H ++ + + + +
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+D Y KC ++ A VF + +K W +M+ Y + + F+ + GVE
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 210 PKDFMISSVLSACARIAGL--ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
P + +L+AC+ AGL E ++ + +I +VD+ G+ G +++AE
Sbjct: 349 PNQMTFTGILTACSH-AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAE 407
Query: 268 IAFNKMPER-NLVCWNAII 285
MP + N W A++
Sbjct: 408 ELIENMPVKPNAAIWGALL 426
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 40/364 (10%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA--KVVFDGIIDK 175
L+ CS ++ RQ+HG ++++G + + L+ F N LA + VFD I
Sbjct: 22 LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W +M+ Y + E E ++ V + +L AC+ ++ LE + +H
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIH 141
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K I+ ++L+++Y K G I+ A + F+++ +R+ V WN++I GY G +
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIE 201
Query: 296 MALSSFEEM--------TSMRC---------EAVPNY------------VTLVCVLSACS 326
MA F M TSM EA+ + V LV L AC+
Sbjct: 202 MAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACA 261
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G +++G K ++ K+ I+ ++D+ + G ++ A E+ ++M + +SVW
Sbjct: 262 DLGVLDQG-KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK-GVSVW 319
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA---TGRWEEADLVRKE 442
A+++ ++G+ GR A + K+ N + + + A G EA L+ +
Sbjct: 320 TAMISGYAIHGR---GREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 443 MKDV 446
M+ +
Sbjct: 377 MERI 380
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 301/556 (54%), Gaps = 41/556 (7%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA+ + G H + Y+ G D + +F ++ W A I L G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+A F T E L++ A L
Sbjct: 108 DVVSAQQLF----DTMPEKSLVSLTAMLTC------------------------------ 133
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
Y K E+ A+V+FDG+ +++ V W M+ Y QN +F + +P
Sbjct: 134 -----YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 188
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ + SVLSAC ++ LE GR VH+ ++ N+ VG+ALVDMY KCGS++DA + F
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 248
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+K+ ++++V WN++I GYA G + AL F+ M M P +T + +LSAC +G
Sbjct: 249 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH--PTNITFIGILSACGHSGW 306
Query: 331 VEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
V +G IF M +YGI+P EHY C+V+LLGRAG V++AYE++K M + P +WG LL
Sbjct: 307 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 366
Query: 391 NACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKK 450
ACR++GK LG + L + +SG ++LLSN++AA G W+ +R MKD G+KK
Sbjct: 367 GACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKK 426
Query: 451 GAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEE 510
GCS I V N++H F A +H + EI ML ++ +K+ GY P T+ L+D+ E E
Sbjct: 427 EPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETE 486
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K + HSEK+A+AFGLI PG I+I KNLR+C DCH K IS I GR+++VRD N
Sbjct: 487 KERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRN 546
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F +G CSC DYW
Sbjct: 547 RFHHFVNGSCSCGDYW 562
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + PN+ T + A L +G+ +H+ +G +V VG + DMYSK G
Sbjct: 181 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 240
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +FD++ ++++ WN+ I + G + A+ F ++ R G P ITF L+A
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 300
Query: 121 CSDCSLLQLGRQLHGFLV-RSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
C + G + + G + + +V+ G+ V A ++V + I+ + V
Sbjct: 301 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 360
Query: 179 SWCSML 184
W ++L
Sbjct: 361 LWGTLL 366
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 319/586 (54%), Gaps = 33/586 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E PN + + +A S L GK+ H L++G DV+VG S DMY K
Sbjct: 361 MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 420
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD M RN+ WN+ +S G ++A+ + + G +PDL+T+ +
Sbjct: 421 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMI-- 478
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
S ++ G++ L ++ +GL N VSW
Sbjct: 479 -SGYAMWGCGKEALAVLHQT-------------------KSLGLTP---------NVVSW 509
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Q + + F ++EGV P I+ +L ACA ++ L+ G+ +H ++++
Sbjct: 510 TALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIR 569
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
++FV +AL+DMY K S+++A F ++ + L WN +I G+A G A+S
Sbjct: 570 NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISV 629
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F EM + P+ +T +LSAC +G + +G K F SM Y I P EHY C+VDL
Sbjct: 630 FNEMQ--KVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDL 687
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNH 420
LGRAG +D A+++I MP++P ++WGALL +CR++ + AA NLFKL+PN+S N+
Sbjct: 688 LGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANY 747
Query: 421 VLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQ 480
+L+ N+++ RWE+ D +R+ M G++ SWI + R+H+F + + H +I
Sbjct: 748 ILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIY 807
Query: 481 AMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRIT 540
L +L EMK GY+PD N +++E EK + H+EK+A+ +GLI + G PIR+
Sbjct: 808 FELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVI 867
Query: 541 KNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KN RIC DCHSA K+IS + RE+ +RD RFH F +G CSC+D+W
Sbjct: 868 KNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 176/414 (42%), Gaps = 71/414 (17%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G ++H +K G DV++ C+ + Y + + A+++F EMP WN I +
Sbjct: 152 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 211
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
+ + ++ F ++ + + + T L AC L +Q+HG++ R G D +VS+
Sbjct: 212 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 271
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY--------------------- 187
CN L+ Y K ++ LA+ VFD + ++N SW SM+ Y
Sbjct: 272 CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 331
Query: 188 ---------------VQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ Y+EE + + EG +P ++SVL A + + L +G+
Sbjct: 332 KPDIVTWNCLLSGHFLHGYKEE-VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK 390
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
H ++ + +++VG++L+DMY K S+ A+ F+ M RN+ WN+++ GY+ +G
Sbjct: 391 ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKG 450
Query: 293 HADMALSSFEEM---------------------------------TSMRCEAVPNYVTLV 319
+ AL +M + PN V+
Sbjct: 451 MFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWT 510
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEI 373
++S S+AG +K F M + G+ P + C++ L+ + EI
Sbjct: 511 ALISGSSQAGNNRDSLKFFAQMQ-QEGVMPNSASITCLLRACASLSLLQKGKEI 563
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 74 RNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQ 132
RN WN+++ G ++ F L G D + L C+ + LG +
Sbjct: 95 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 154
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
+HG L++ GFD +V + L++FYG+C + A VF + + + W +++ +Q+ +
Sbjct: 155 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 214
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
+ G ++F + ++ + I VL AC ++ L + +H + ++ ++ + +
Sbjct: 215 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 274
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+ MY K G ++ A F+ M RN WN++I YA G + A S F E+ S +
Sbjct: 275 LISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELES--SDMK 332
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
P+ VT C+LS G E+ + I M + G KP + V+ + G ++ E
Sbjct: 333 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 391
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 175/406 (43%), Gaps = 74/406 (18%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
KQ+H + G DV + MYSK G + A ++FD M RN ++WN+ IS+
Sbjct: 253 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 312
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITF---------------------------------- 114
G +A F L + +PD++T+
Sbjct: 313 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 372
Query: 115 -CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
+ L A S+ L +G++ HG+++R+GFD +V V L+D Y K + + A+ VFD +
Sbjct: 373 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 432
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
++N +W S++ Y E+ ++ +EG++P + ++S A
Sbjct: 433 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYA---------- 482
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM--PERNLVCWNAIIGGYAHQ 291
M+G CG A + K N+V W A+I G +
Sbjct: 483 ----------------------MWG-CGKEALAVLHQTKSLGLTPNVVSWTALISGSSQA 519
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G+ +L F +M + +PN ++ C+L AC+ ++KG +I + ++++ G
Sbjct: 520 GNNRDSLKFFAQMQ--QEGVMPNSASITCLLRACASLSLLQKGKEI-HCLSIRNGFIEDV 576
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ ++ + A+++ + + + T++ W ++ ++G
Sbjct: 577 FVATALIDMYSKSSSLKNAHKVFRRIQNK-TLASWNCMIMGFAIFG 621
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/510 (41%), Positives = 286/510 (56%), Gaps = 8/510 (1%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
N + A RP+ A++ RR PD T+ + AC+ L+ G LH +
Sbjct: 776 NTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAK 832
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDKNDVSWCSMLVVYVQNYEEENGC 197
+GF V V N LV YG C A VFD + +N VSW SML + N
Sbjct: 833 NGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVL 892
Query: 198 QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F P F I SVL+ACA L LGR VH K + N V +AL+D+Y
Sbjct: 893 TVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLY 952
Query: 258 GKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
KCGS+ DA F +M R +V W ++I G A G AL F M R + VP +
Sbjct: 953 AKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLME--REKLVPTEI 1010
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
T+V VL ACS G V+ G + F M YGI P EH C+VDLLGRAG V+ AY+ I
Sbjct: 1011 TMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIIT 1070
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
MP+ P VW LL +C ++ K ELG++A + L +LDP SG++VLLSN++AA G W +
Sbjct: 1071 MPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADV 1130
Query: 437 DLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYI 496
++RK M ++K G S + ++N ++ F D SH + +I ML ++ E ++ GYI
Sbjct: 1131 HVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYI 1190
Query: 497 PDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFI 556
P T+ L D+EEEEK T + +HSE++A+AF L+ PG+PIRI KNLR+CGDCH AF I
Sbjct: 1191 PRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLI 1250
Query: 557 SGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
S + RE+IVRD +RFH F G CSC DYW
Sbjct: 1251 SKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 5/329 (1%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RR P+ T+P L +A + L G+ LHA A K+G + VFV S +Y GL
Sbjct: 796 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 855
Query: 62 DDADKMFDEMPER--NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A K+FDEMP R NL +WN+ +++ GRP + F + PD T + L
Sbjct: 856 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 915
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
AC++ L LGR++H ++ + G N V N L+D Y KC V A+ +F+ + + + V
Sbjct: 916 ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 975
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAV 237
SW S++V N + ++F RE + P + + VL AC+ ++ G R +
Sbjct: 976 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 1035
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ I +VD+ G+ G +++A MP E N V W ++G A ++
Sbjct: 1036 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL 1095
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
++E + + +YV L + +A
Sbjct: 1096 GKVAWERLVELDPGHSGDYVLLSNLYAAV 1124
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 312/589 (52%), Gaps = 48/589 (8%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
D+FVG + Y K A K+FD M ER+ WN +S V AI F ++
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ G D T A L ++ L LG + ++ GF + V GL Y KC E+
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A+++F I + VS+ +M+ Y N E E+ ++F G + I ++
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
L L R +H K+ V N V +AL +Y + I+ A + F++ E++L WNA
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC------------------ 325
+I GYA G + A+S F+EM +CE PN VT+ +LSAC
Sbjct: 380 MISGYAQNGLTEKAISLFQEM--QKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINR 437
Query: 326 ----------------------------SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
S AG V +G +IF SM +G +P EHYAC+
Sbjct: 438 ESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACM 497
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGRAG +D+A + I++MP+ P VWGALL AC ++ L R+A+D LF+LDP +
Sbjct: 498 VDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNV 557
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
G +VLLSN+++A + EA VR +K + K GC+ I V N +HIF + D SH + T
Sbjct: 558 GYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQAT 617
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I AML KL +M+ AG+ +T AL+DVEEEEK V HSEK+A+AFGLI PG I
Sbjct: 618 AIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEI 677
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
RI KNLR+C DCH+A KFIS I R ++VRD NRFH F DG CSC DYW
Sbjct: 678 RIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/459 (42%), Positives = 290/459 (63%), Gaps = 7/459 (1%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
LH + + GF+ N V N ++D Y K ++ +A+ VFD ++++ VSW SM+ +Y Q
Sbjct: 219 SLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQ 277
Query: 190 N--YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
N E G + G++ +S+VL ACA ++ G+ +H V+ +E N+
Sbjct: 278 NGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENV 337
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSM 307
+VG+++VDMY KCG ++ A AF K+ E+N++ W+A+I GY G AL F EM
Sbjct: 338 YVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMK-- 395
Query: 308 RCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLV 367
R PNY+T + VL+ACS AG +++G + +M ++GI+ G EHY C+VDLLGRAG +
Sbjct: 396 RSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCL 455
Query: 368 DRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMF 427
D AY +IKEM ++P ++WGALL+ACR++ EL ++ LF+LD ++SG +VLLSN++
Sbjct: 456 DEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIY 515
Query: 428 AATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLR 487
A W++ + +R +K I+K G S +K +I++F D SH ++ EI + L KL
Sbjct: 516 AEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLL 575
Query: 488 EEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICG 547
E M+ AGY+P+T L+D++EEEK + + HSEK+A+AF L+ P I I KNLR+C
Sbjct: 576 ERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCS 635
Query: 548 DCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
DCH+A KFI+ I RE+I+RD RFH F DG CSC DYW
Sbjct: 636 DCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 15 CLFKASSALHIPVTG--KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDE 70
L S++ +P G LHAL K G + V + D Y+K G +D A K+FD
Sbjct: 201 ALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDT 260
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQ 128
M ER++ +WN+ I+ G AI + + GG + + + A L AC+ +Q
Sbjct: 261 M-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQ 319
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
G+++H +VR G + NV V +VD Y KC V +A F I +KN +SW +M+ Y
Sbjct: 320 TGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 379
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNI 247
+ + ++F +R G+ P SVL+AC+ L+ GR +A+ + +E +
Sbjct: 380 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 439
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
+VD+ G+ G + +A +M + + W A++ + ++A S + +
Sbjct: 440 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 499
Query: 307 MRCEAVPNYVTL 318
+ YV L
Sbjct: 500 LDASNSGYYVLL 511
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 324/584 (55%), Gaps = 20/584 (3%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPE-- 73
+ A S+ + G+ +H+ SG ++ V + MY + G ++A K+FD M E
Sbjct: 253 ILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEAL 312
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R++ +WN +S V R K+AI + +R D +T+ + L+ACS + LGR L
Sbjct: 313 RDVVSWNIMLSAYVHNDRGKDAIQLY---QRMQLRADKVTYVSLLSACSSAEDVGLGRVL 369
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEE 193
H +V + NV V N LV Y KC A+ VFD + ++ +SW +++ YV+
Sbjct: 370 HKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLV 429
Query: 194 ENGCQMF---LTARREG----VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGN 246
C +F L + G V+P ++L+ACA ++ LE G+ V A + +
Sbjct: 430 AEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSD 489
Query: 247 IFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSF--EE 303
VG+A+V++YGKCG I++ F+ + R ++ WNA+I YA G + AL F E
Sbjct: 490 KAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME 549
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY-GIKPGAEHYACVVDLLG 362
M +R P+ + V +L ACS G ++G F SMT +Y + +H+ CV DLLG
Sbjct: 550 MEGVR----PDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 605
Query: 363 RAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
R G + A E ++++P++P W +LL ACR + + + A+ L +L+P + +V
Sbjct: 606 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 665
Query: 423 LSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAM 482
LSN++A +W VRK M + G+KK G S I + +H F D +H RN EI+
Sbjct: 666 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 725
Query: 483 LTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKN 542
L KL +MK GY+PDT L+ V+E+EK + HSE++A+A GLI+ P G P+R+TKN
Sbjct: 726 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 785
Query: 543 LRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
LR+C DCH+A K IS I GR+++VRD RFH F DG CSC DYW
Sbjct: 786 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 189/396 (47%), Gaps = 11/396 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
+ ++ + + T+ L + + G+++H+LA+K + ++ +G MY+
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
DA FD + +RNL +W ++ + G+ K + A +R+ G PD +TF L
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
+C D L+ G ++H +V S + + V N L++ Y KC + AK VF + +N +
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 213
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW M + + + F G++ + ++LSAC+ A ++ GR +H+
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCI 273
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE--RNLVCWNAIIGGYAHQGHADM 296
+ E + V +A++ MYG+CG++++A F+ M E R++V WN ++ Y H
Sbjct: 274 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ ++ M + + VT V +LSACS A V G ++ + + ++
Sbjct: 334 AIQLYQRM-----QLRADKVTYVSLLSACSSAEDVGLG-RVLHKQIVNDELEKNVIVGNA 387
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+V + + G A + +M R IS W +++A
Sbjct: 388 LVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISA 422
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA-CVEGNIFVGSALVDMYGK 259
L ++ V ++ + +L CAR L GR +H++AVK + GN+ +G+ +V MY
Sbjct: 32 LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTL 318
C S DA+ AF+ + +RNL W ++ +A G + L + E MR + V P+ VT
Sbjct: 92 CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALER---MRQDGVRPDAVTF 148
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ L +C ++ G++I + M + ++ + ++++ + G + A + +M
Sbjct: 149 ITALGSCGDPESLRDGIRI-HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 207
Query: 379 MRPTISVWGALLNACRVYG 397
+ W + A ++G
Sbjct: 208 RTRNVISWSIMAGAHALHG 226
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ F + A + + GK + A G D VG + ++Y K G ++
Sbjct: 451 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGR 510
Query: 66 KMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
++FD + R ++ WNA I+ G+ A+ F + G PD +F + L ACS
Sbjct: 511 RIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHT 570
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNG--LVDFYGKCNEVGLAKVVFDGIIDKND-VSWC 181
L G+ + + ++ + + D G+ + A+ + + K D V+W
Sbjct: 571 GLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWT 630
Query: 182 SML 184
S+L
Sbjct: 631 SLL 633
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 322/590 (54%), Gaps = 46/590 (7%)
Query: 39 SGQIHDVFVGCSAFDMYSKT---GLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNA 95
+G I D F + + GL D + ++FD + N WN + + + A
Sbjct: 55 TGFISDTFAASRLLKFSTDSPFIGL-DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKA 113
Query: 96 IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGNVSVCNGLVD 154
+ + + + PD T+ + AC+ LL+ G +++H +++ GFD +V V N L++
Sbjct: 114 LLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLIN 172
Query: 155 FYGKCNEVGLAKVVFD---------------GIIDKND-------------------VSW 180
Y C + A+ +FD G + K D VSW
Sbjct: 173 MYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSW 232
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ Y QN E MF+ G+ + ++ SVLSACA ++ ++ G+ +H + ++
Sbjct: 233 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 292
Query: 241 ACVEGNIFVGSALV----DMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+E + + +AL+ DMY KCG +++A FN M E+ + WNA+I G A G +
Sbjct: 293 MGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 352
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
+L F EM + +PN +T + VL AC G V++G F SM K+GI+P +HY C
Sbjct: 353 SLDMFSEMKN--NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 410
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAGL++ A ++I+ MPM P ++ WGALL AC+ +G E+G L +L P+
Sbjct: 411 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 470
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G HVLLSN+FA+ G WE+ VR MK G+ K GCS I +H F A D +H
Sbjct: 471 DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWI 530
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
+++ ML ++ + +K GY PDTN D++EEEK T + HSEK+A+AFGL+ I P P
Sbjct: 531 NKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTP 590
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLRIC DCH+A K IS RE++VRD +RFH F +G CSC DYW
Sbjct: 591 IRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 40/337 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + + P+++T+P + +A + + GK++H LK G DV+V + +MY+ G
Sbjct: 120 MVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 179
Query: 61 KDDADKMFDEMP----------------------------------ERNLATWNAYISNA 86
DA K+FDE P E+++ +W+A IS
Sbjct: 180 MRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGY 239
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
G + A+ FI + G D + + L+AC+ S+++ G+ +HG ++R G + V
Sbjct: 240 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 299
Query: 147 SVCNGLV----DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
++ N L+ D Y KC V A VF+G+ +K SW ++++ N E MF
Sbjct: 300 NLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE 359
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV-KACVEGNIFVGSALVDMYGKCG 261
+ GV P + VL AC + ++ GR A + K +E N+ +VD+ G+ G
Sbjct: 360 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 419
Query: 262 SIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+ +AE MP ++ W A++G G +M
Sbjct: 420 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 456
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL--AKVVF 169
IT +C L+ ++ ++ +GF + + L+ F +GL + +F
Sbjct: 27 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 86
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D I + N W +M+ Y+Q+ E ++ + V P ++ V+ ACA + LE
Sbjct: 87 DRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLE 145
Query: 230 L-GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE--------------------- 267
G+ +H +K + +++V + L++MY CG+++DA
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 205
Query: 268 -------------IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTS--MRCEAV 312
FN+M E+++V W+A+I GY G + AL F EM + MR +
Sbjct: 206 VKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE- 264
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV----DLLGRAGLVD 368
V +V VLSAC+ V+ G K+ + + ++ GI+ ++ D+ + G V+
Sbjct: 265 ---VVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
A E+ M + +S W AL+ V G E
Sbjct: 321 NALEVFNGMEEK-GVSSWNALIIGLAVNGLVE 351
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 328/561 (58%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+HA LK G D F + A +K G D A +F ++ E + +N I V
Sbjct: 15 KQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTMIRGNV 74
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ + A+ ++++ G EPD T+ L ACS ++ G Q+HG + + G +G+V
Sbjct: 75 NDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVI 134
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARRE 206
V N L++ YGKC E+ A VF+G+ +K+ SW +++ + E N C M L E
Sbjct: 135 VQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHA-CVEMWNECLMLLGKMSSE 193
Query: 207 G-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G ++ + +VLSAC + +LG+ +H + ++ E N+ V ++L+DMY K G ++
Sbjct: 194 GRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEK 253
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F M E+N + +I G A G AL F EM P+ V V V SAC
Sbjct: 254 GLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEG--LAPDDVVYVGVFSAC 311
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG VE+G++ F SM ++ I+P +HY C+VDLLGR G++ AYE+IK M ++P +
Sbjct: 312 SHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVI 371
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL+AC+V+ E+G+IAA+NLF L+ N+SG++++L+NM+A +W++ +R ++ +
Sbjct: 372 WRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAE 431
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+ + G S I K +++ F ++D S + I M+ ++ ++K GYIPDT+ L D
Sbjct: 432 RNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLD 491
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V++EEK + HS+K+A+AFGLI G P+RIT+NLR+C DCH+ K+IS I RE+
Sbjct: 492 VDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREIT 551
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD RFH F +G CSC DYW
Sbjct: 552 VRDRLRFHHFKNGSCSCKDYW 572
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ P+ FT+P + KA S L + G Q+H K G DV V S +MY K G +A
Sbjct: 94 VEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNAC 153
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
+F+ M E+++A+W+A I + + G + T L+AC+
Sbjct: 154 DVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHL 213
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGK--CNEVGLAKVVFDGIIDKNDVSWCS 182
LG+ +HG L+R+ + NV V L+D Y K C E GL VF + +KN S+
Sbjct: 214 GSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLR--VFKNMSEKNRYSYTV 271
Query: 183 MLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKA 241
M+ + + ++F EG+ P D + V SAC+ +E G + ++ +
Sbjct: 272 MISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEH 331
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+E + +VD+ G+ G +++A M + N V W +++
Sbjct: 332 KIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSA 378
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/616 (37%), Positives = 333/616 (54%), Gaps = 51/616 (8%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD--DADKMFDEMPE 73
LF+ SA P +QLHA +LK+ + FV +YS + D A +FD +
Sbjct: 22 LFQTCSA---PQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQR 78
Query: 74 RNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
R+L WN I V + I F L PD T + C+ ++Q G+Q+
Sbjct: 79 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEY-LPDNFTLPCVIKGCARLGVVQEGKQI 137
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-----------NDVSWCS 182
HG ++ GF +V V LV+ Y KC E+ A+ VFDG+IDK N VSW +
Sbjct: 138 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNA 197
Query: 183 MLVVYVQN----------YE----------------EENG-----CQMFLTARREGVEPK 211
M+ Y+++ Y+ E NG +MF + G P
Sbjct: 198 MINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPS 257
Query: 212 DFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
+ SVLSA + +A L GR +H+ K E + +G++L++MY KCG I+ A F
Sbjct: 258 HATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFR 317
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ ++ + W AII G G A+ AL+ F EM + PN + + VL+AC+ AG V
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK--PNAIIFIGVLNACNHAGLV 375
Query: 332 EKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
+ G + F M +Y I+P EHY C+VD+L RAG ++ A I+ MP+ P +W +LL
Sbjct: 376 DDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 435
Query: 392 ACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKG 451
R +GK ++G AA + ++ P G ++LLSNM+AA+G WE+ VR+ M G +K
Sbjct: 436 GSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKD 495
Query: 452 AGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE-EEE 510
GCS + K +H F D SH + EI A +++++E++K G++PDT L +E E+E
Sbjct: 496 PGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKE 555
Query: 511 KMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNN 570
K E+ +HSE++A+AFGLI + PG+PIRI KNLR+C DCHS K +S I RE+IVRDN
Sbjct: 556 KEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNC 615
Query: 571 RFHRFWDGYCSCSDYW 586
RFH F +G CSC DYW
Sbjct: 616 RFHHFKNGSCSCMDYW 631
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 165/376 (43%), Gaps = 44/376 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P++FT PC+ K + L + GKQ+H LALK G DVFV S +MYSK G D A K+
Sbjct: 113 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 172
Query: 68 FD------------------------------------------EMPERNLATWNAYISN 85
FD +MP +L TWN I+
Sbjct: 173 FDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAG 232
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
L G+ +A+ F + + G P T + L+A S ++L GR +H ++ ++GF+ +
Sbjct: 233 YELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELD 292
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ L++ Y KC + A VF I K W +++V + + +FL +
Sbjct: 293 GILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCK 352
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQ 264
G++P + VL+AC ++ GR + + +E + LVD+ + G ++
Sbjct: 353 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLE 412
Query: 265 DAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+A+ MP N V W +++GG + G D+ + + + + E + Y+ L + +
Sbjct: 413 EAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYA 472
Query: 324 ACSRAGAVEKGMKIFY 339
A V ++ Y
Sbjct: 473 ASGMWEKVSHVREMMY 488
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 170/402 (42%), Gaps = 90/402 (22%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYG--KCNEVGLAKVVFDGIIDK 175
L+ CS Q QLH F +++ + V + L+ Y K N++G A+ +FD I +
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ + W +++ YV+N +G +F E + P +F + V+ CAR+ ++ G+ +H
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 138
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-----------NLVCWNAI 284
+A+K ++FV +LV+MY KCG I A F+ M ++ NLV WNA+
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAM 198
Query: 285 IGGYAHQGHADMALSSFEEM-----------------------------TSMRCEAVPNY 315
I GY G D AL F +M ++ + P++
Sbjct: 199 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 258
Query: 316 VTLVCVLSACS-----------------------------------RAGAVEKGMKIFYS 340
TLV VLSA S + G +E + +F +
Sbjct: 259 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 318
Query: 341 MTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM---PMRPTISVWGALLNACRVYG 397
+ K H+ ++ LG G+ + A + EM ++P ++ +LNAC G
Sbjct: 319 IQ-----KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAG 373
Query: 398 KPELGRIAAD---NLFKLDPNDSGNHVLLSNMFAATGRWEEA 436
+ GR D N +K++P ++ L ++ G EEA
Sbjct: 374 LVDDGRQYFDMMMNEYKIEPTLE-HYGCLVDILCRAGHLEEA 414
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 340/618 (55%), Gaps = 36/618 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
+R E + PN T C+ A + L TG++++ SG +++D+ + + DMY K
Sbjct: 226 VRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMIS-ALVDMYMKCN 284
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
D A ++FDE NL NA SN V G K A+ + +G PD I+ + ++
Sbjct: 285 AIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAIS 344
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
+CS + G+ HG+++R+GF+ ++CN L+D Y KC+ A +FD + +K V+
Sbjct: 345 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 404
Query: 180 WCSMLVVYVQNYEEENGCQMFLT--------------------ARREGVEPKDFMIS--- 216
W S++ Y++N E + + F T E +E +M S
Sbjct: 405 WNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQEC 464
Query: 217 ---------SVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
S+ SAC + L+L + ++ K ++ ++ +G+ LVDM+ +CG + A
Sbjct: 465 VNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAM 524
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
FN + R++ W A IG A G+ + A+ F EM + P+ V + L+AC
Sbjct: 525 SIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLK--PDGVVFIGALTACCH 582
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
G V++G +IF SM +G+ P HY C+VDLLGRAGL++ A ++IK+MP P +W
Sbjct: 583 GGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWN 642
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
+LL ACRV G E+ AA+ + L P +G++VLLSN++A+ GRW + VR MK+ G
Sbjct: 643 SLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 702
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
++K G S I ++ + H F + D SH +I+AML +L + G++PD + L DV+
Sbjct: 703 LRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVD 762
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
E+EK+ + HSEK+A+AFGLI+ G IRI KNLR+C CHS KF S + RE+I+R
Sbjct: 763 EQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILR 822
Query: 568 DNNRFHRFWDGYCSCSDY 585
DNNRFH G CSCSD+
Sbjct: 823 DNNRFHFIRQGKCSCSDF 840
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 186/418 (44%), Gaps = 35/418 (8%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M ISP+ +TFP + G Q+H L +K D+FV S Y++ G
Sbjct: 124 MMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGE 183
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-PDLITFCAFLN 119
D A K+FDEM ERN+ +W + I K+A+D F + R P+ +T ++
Sbjct: 184 LDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVIS 243
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ L+ G +++ F+ SG + N + + LVD Y KCN + +AK +FD N
Sbjct: 244 ACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDL 303
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAV 239
+M YV+ + + G+ P + S +S+C+++ + G+S H +
Sbjct: 304 CNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVL 363
Query: 240 KACVEGNIFVGSALVDMYGKC--------------------------GSIQDAEI----- 268
+ E + +AL+DMY KC G I++ E+
Sbjct: 364 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWE 423
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
FN MPE+N+V WN II + + A+ F M S C V VT++ + SAC
Sbjct: 424 TFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDG-VTMMSIASACGHL 482
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
GA++ I+Y + K I+ +VD+ R G + A I + R +S W
Sbjct: 483 GALDLAKWIYYYIE-KNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 5/313 (1%)
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
+N+ I G K AI FI + +G PD TF L+ C+ G Q+HG ++
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+ + ++ V N LV FY +C E+ A+ VFD + ++N VSW SM+ Y + ++
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 199 MFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMY 257
+F R E V P + V+SACA++ LE G V+ + +E N + SALVDMY
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280
Query: 258 GKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVT 317
KC +I A+ F++ NL NA+ Y QG AL M M P+ ++
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLM--MDSGIRPDRIS 338
Query: 318 LVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM 377
++ +S+CS+ + G K + L+ G + ++D+ + D A+ I M
Sbjct: 339 MLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 397
Query: 378 PMRPTISVWGALL 390
+ T+ W +++
Sbjct: 398 SNK-TVVTWNSIV 409
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 321/566 (56%), Gaps = 14/566 (2%)
Query: 27 VTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ G ++HA A+K G ++ +G S DMY K F+ MPE++L +W
Sbjct: 369 LAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTT----- 423
Query: 87 VLGGRPKNA--IDAFINLRRTGGEP---DLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
++ G +N +DA LR+ E D + + L ACS +L +++HG++++ G
Sbjct: 424 IIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGG 483
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL 201
++ + N +V+ YG+ V A+ VF+ I K+ VSW SM+ V N ++F
Sbjct: 484 L-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFN 542
Query: 202 TARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
+ +EP + SVL A A ++ L+ G+ +H ++ + ++LVDMY +CG
Sbjct: 543 SLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCG 602
Query: 262 SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCV 321
++++A FN + +R+L+ W ++I G A+ F +MT +P+++T + +
Sbjct: 603 TMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDEN--VLPDHITFLAL 660
Query: 322 LSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRP 381
L ACS +G V +G + F M +Y ++P EHYAC+VDLL R+ ++ AY ++ MP+ P
Sbjct: 661 LYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEP 720
Query: 382 TISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRK 441
+ VW ALL ACR++ +LG +AA L +L+ +SGN+VL+SN FAA GRW + + VR
Sbjct: 721 SAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRS 780
Query: 442 EMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK-AAGYIPDTN 500
MK +KK GCSWI V+N+IH F A+D SH + I L + + +K GY T
Sbjct: 781 IMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTK 840
Query: 501 FALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIV 560
+DV EEEK + HSE++AL +GL+ G +RITKNLRIC DCH+ FK S I
Sbjct: 841 LVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEIS 900
Query: 561 GREVIVRDNNRFHRFWDGYCSCSDYW 586
R ++VRD +RFH F G CSC D+W
Sbjct: 901 QRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 215/429 (50%), Gaps = 19/429 (4%)
Query: 8 PNDFTFPCLFKASSALHIPVT------GKQLHALALKSGQIHD-VFVGCSAFDMYSKTGL 60
P FP S AL + + G+QLHA LK+ D VF+ MY K G
Sbjct: 38 PTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGS 97
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA K+FD+M ER + TWNA I V GR AI+ + +R G D TF L A
Sbjct: 98 FYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKA 157
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD-GIIDKND-V 178
C +LG ++HG V+ G+ G V VCN L+ Y KC ++G A+V+FD G+++K+D V
Sbjct: 158 CGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPV 217
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW S++ +V E +F + GVE + S L AC +++GR +HAV
Sbjct: 218 SWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVI 277
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMAL 298
+K+ +++V +AL+ MY CG ++DAE F M ++ V WN ++ G A+
Sbjct: 278 LKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAI 337
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVV 358
+ F++M P+ V+++ +++A R+ + GM++ ++ +K+GI ++
Sbjct: 338 NHFQDMQD--SGQKPDQVSVLNMIAASGRSANLLAGMEV-HAYAIKHGIDSNMHIGNSLI 394
Query: 359 DLLGRAGLVDRAYEIIKEMPMRPTISVWGALL-----NACRVYGKPELGRIAADNLFKLD 413
D+ G+ V + MP + IS W ++ N C + L ++ + + +D
Sbjct: 395 DMYGKCCCVKYMGSAFEYMPEKDLIS-WTTIIAGYAQNECHLDALNLLRKVQLEKM-DVD 452
Query: 414 PNDSGNHVL 422
P G+ +L
Sbjct: 453 PMMIGSILL 461
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 204/396 (51%), Gaps = 9/396 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + FTFPC+ KA A G ++H +A+K G VFV + MY+K G
Sbjct: 139 MRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGD 198
Query: 61 KDDADKMFDE--MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +FD M + + +WN+ IS V G A+ F ++ G E + TF + L
Sbjct: 199 LGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSAL 258
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC + +++GR +H +++S +V V N L+ Y C ++ A+ VF ++ K+ V
Sbjct: 259 QACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCV 318
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW ++L VQN + F + G +P + ++++A R A L G VHA A
Sbjct: 319 SWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYA 378
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-QGHADMA 297
+K ++ N+ +G++L+DMYGKC ++ AF MPE++L+ W II GYA + H D A
Sbjct: 379 IKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLD-A 437
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
L+ ++ + + P + + +L ACS + EK +K + LK G+ A +
Sbjct: 438 LNLLRKVQLEKMDVDP--MMIGSILLACSGLKS-EKLIKEIHGYVLKGGLADILIQNA-I 493
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
V++ G LVD A + + + + +S W +++ C
Sbjct: 494 VNVYGELALVDYARHVFESINSKDIVS-WTSMITCC 528
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P+ T + A++AL GK++H ++ G + + S DMY++ G ++A
Sbjct: 549 IEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENAR 608
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ + +R+L W + I+ + G K+AID F + PD ITF A L ACS
Sbjct: 609 NIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSG 668
Query: 126 LLQLGRQLHGFLVRSGFD----GNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDVSW 180
L+ G+Q H ++++ + C LVD + N + A V + I+ + W
Sbjct: 669 LVVEGKQ-HFEIMKNEYKLEPWPEHYAC--LVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725
Query: 181 CSML 184
C++L
Sbjct: 726 CALL 729
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 310/528 (58%), Gaps = 15/528 (2%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP------DLITFCAF 117
A ++FD MP+R+ W+A +S G+P+ A+ + RR EP + T +
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYARHGQPEAALALY---RRMQEEPGNDGADNEFTASSA 170
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFD---GNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
L A + + GR+LH +VR G D G+ + + L D Y KC V A+ VFD +
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRS 233
++ VSW +M+ Y G ++FL R GV P +F + VL ACA A GR
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQ 290
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH K+ + F SAL+ MY KCG + A F M + +LV W A+I GYA G
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ AL F+ +R P++VT V VLSAC+ AG V+KG++IF+S+ +Y I+ A+H
Sbjct: 351 PEEALRYFDMF--LRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADH 408
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
YACV+DLL R+G +RA ++I M ++P +W +LL CR++ L R AA+ LF+++
Sbjct: 409 YACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIE 468
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P + +V L+N++A+ G ++E + VR+ M+ GI K SWI V R+H+F D SH
Sbjct: 469 PENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSH 528
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ EI A+L KL +M GY+ D F L+DVE+E+K ++G+HSE++A+AFG+IA P
Sbjct: 529 PKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPE 588
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCS 581
G PI++ KNLRICGDCH+A K IS IV R++IVRD+N GY S
Sbjct: 589 GSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNSLKEQDIGYHS 636
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 161/338 (47%), Gaps = 6/338 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSG---QIHDVFVGCSAFDMYSKTGLKDDAD 65
N+FT A++A G++LH ++ G D + + DMY+K G DDA
Sbjct: 163 NEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDAR 222
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
++FD MP R+ +W A + GGR F+++ RT G P+ T+ L AC++
Sbjct: 223 RVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEF 282
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
++ GRQ+HG + +SG + + L+ Y KC ++G A VF+ + + VSW +++
Sbjct: 283 AVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVI 342
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACV 243
Y QN + E + F R G++P VLSACA ++ G + H++ + C+
Sbjct: 343 SGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCI 402
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFE 302
E + ++D+ + G + AE M + N W +++GG + +A + E
Sbjct: 403 EHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAE 462
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYS 340
+ + E YVTL + ++ VE +I S
Sbjct: 463 ALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+R + PN+FT+ + +A + + G+Q+H KSG F + MYSK G
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A ++F+ M + +L +W A IS G+P+ A+ F R+G +PD +TF L+A
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
C+ L+ G ++ H + + ++D + + A K++ + + N
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKF 439
Query: 179 SWCSML 184
W S+L
Sbjct: 440 LWASLL 445
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 312/558 (55%), Gaps = 3/558 (0%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
+ +HA +KS D F+G Y G DA K+FDEMP ++ +WN+ +S
Sbjct: 71 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRI 130
Query: 90 GRPKNAIDAFINLR-RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
G N + F +R E + +T + ++AC+ G LH V+ G + V V
Sbjct: 131 GDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKV 190
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
N ++ YGK V A +F + ++N VSW SML V+ QN F R G+
Sbjct: 191 VNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGL 250
Query: 209 EPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P + I S+L AC ++ L ++H V + NI + + L+++Y K G + +
Sbjct: 251 FPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHK 310
Query: 269 AFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRA 328
F ++ + + V A++ GYA GH A+ F+ ++R P++VT +LSACS +
Sbjct: 311 VFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFK--WTVREGMKPDHVTFTHLLSACSHS 368
Query: 329 GAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGA 388
G V G F M+ Y ++P +HY+C+VDLLGR G+++ AY +IK MP+ P VWGA
Sbjct: 369 GLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGA 428
Query: 389 LLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGI 448
LL ACRVY LG+ AA+NL L+P+D N+++LSN+++A G W +A VR MK
Sbjct: 429 LLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVF 488
Query: 449 KKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEE 508
+ AGCS+I N+IH F D SH + +I L ++ ++K G++ +T L+DV+E
Sbjct: 489 IRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDE 548
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
E K + HSEKIALAFGL+ +P+ I KNLRIC DCH+ KF+S I R +I+RD
Sbjct: 549 EVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIRD 608
Query: 569 NNRFHRFWDGYCSCSDYW 586
+ RFH F DG CSC+DYW
Sbjct: 609 SKRFHHFSDGLCSCADYW 626
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 151/333 (45%), Gaps = 5/333 (1%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N+ T + A + G LH A+K G +V V + +MY K G D A K+F
Sbjct: 152 NELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLF 211
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+PE+N+ +WN+ ++ G P A++ F +R G PD T + L AC L +
Sbjct: 212 WALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGLFPDEATILSLLQACEKLPLGR 271
Query: 129 LGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV 188
L +HG + G + N+++ L++ Y K + ++ VF I + V+ +ML Y
Sbjct: 272 LVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHKVFAEISKPDKVALTAMLAGYA 331
Query: 189 QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEGNI 247
+ + + F REG++P + +LSAC+ + G+ + V+ +
Sbjct: 332 MHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMSDFYRVQPQL 391
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTS 306
S +VD+ G+CG + DA MP E N W A++G + ++ + E + +
Sbjct: 392 DHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRVYRNINLGKEAAENLIA 451
Query: 307 MRCEAVPNYVTLVCVLSAC---SRAGAVEKGMK 336
+ NY+ L + SA S A V MK
Sbjct: 452 LNPSDPRNYIMLSNIYSAAGLWSDASKVRALMK 484
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P++ T L +A L + + +H + G ++ + + ++YSK G
Sbjct: 245 MRVNGLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGR 304
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ + K+F E+ + + A ++ + G K AI+ F R G +PD +TF L+A
Sbjct: 305 LNVSHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSA 364
Query: 121 CSDCSLLQLGRQLHGFLVRSGF---DGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKN 176
CS L+ G+ + F + S F + + +VD G+C + A +++ ++ N
Sbjct: 365 CSHSGLVMDGK--YYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPN 422
Query: 177 DVSWCSML 184
W ++L
Sbjct: 423 SGVWGALL 430
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 313/555 (56%), Gaps = 37/555 (6%)
Query: 67 MFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
+F ++ N W A I L G A+ + ++R+ P TF A +AC+
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 127 LQLGRQLHG-FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--------------- 170
LG QLH L+ GF ++ V N ++D Y KC + A++VFD
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 171 ----------------GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
G+ K+ V+W +M+ Y QN + ++F R EGVE +
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVT 244
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ V+SACA++ + + +A + V N+ VGSAL+DMY KCG++++A F
Sbjct: 245 LVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKG 304
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M ERN+ ++++I G+A G A A+ F +M + PN+VT V VL+ACS AG V+
Sbjct: 305 MRERNVFSYSSMIVGFAIHGRARAAIKLFYDM--LETGVKPNHVTFVGVLTACSHAGLVD 362
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G ++F SM YG+ P AE YAC+ DLL RAG +++A ++++ MPM +VWGALL A
Sbjct: 363 QGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGA 422
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
V+G P++ IA+ LF+L+P++ GN++LLSN +A+ GRW++ VRK +++ +KK
Sbjct: 423 SHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNP 482
Query: 453 GCSWISVKN-RIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK 511
G SW+ KN IH F A D SH + EI+ L L E +K GY P+ + Y + + EK
Sbjct: 483 GWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREK 542
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSEK+ALAFGL++ G I+I KNLRIC DCH S + GR+++VRDN R
Sbjct: 543 RLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTR 602
Query: 572 FHRFWDGYCSCSDYW 586
FH F +G CSCS++W
Sbjct: 603 FHHFLNGACSCSNFW 617
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 165/381 (43%), Gaps = 38/381 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTG 59
MR+ +SP FTF LF A +A+ G QLHA L G D++V + DMY K G
Sbjct: 100 MRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCG 159
Query: 60 LKDDADKMFDEMPER-------------------------------NLATWNAYISNAVL 88
A +FDEMPER ++ TW A ++
Sbjct: 160 SLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQ 219
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF--DGNV 146
P +A++ F LR G E D +T ++AC+ + + SGF NV
Sbjct: 220 NAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNV 279
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V + L+D Y KC V A VF G+ ++N S+ SM+V + + ++F
Sbjct: 280 LVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLET 339
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQ 264
GV+P VL+AC+ ++ G+ + A +++ C V + + + D+ + G ++
Sbjct: 340 GVKPNHVTFVGVLTACSHAGLVDQGQQLFA-SMEKCYGVAPTAELYACMTDLLSRAGYLE 398
Query: 265 DAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A MP E + W A++G G+ D+A + + + + + + NY+ L +
Sbjct: 399 KALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYA 458
Query: 324 ACSRAGAVEKGMKIFYSMTLK 344
+ R V K K+ LK
Sbjct: 459 SAGRWDDVSKVRKLLREKNLK 479
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 41/342 (11%)
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL---AKVVFDGIIDKNDVSW 180
CS L +++H + + V L+ V L +++F + N +W
Sbjct: 18 CSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAW 77
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-VAV 239
+++ Y + + R+ V P F S++ SACA + LG +HA +
Sbjct: 78 TALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLL 137
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH--------- 290
+++V +A++DMY KCGS++ A + F++MPER+++ W +I Y
Sbjct: 138 LGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARD 197
Query: 291 -----------------QGHAD--MALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGA 330
G+A M + + E +R E V + VTLV V+SAC++ GA
Sbjct: 198 LFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGA 257
Query: 331 VEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ I + + +G+ + ++D+ + G V+ AY++ K M R S + ++
Sbjct: 258 SKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFS-YSSM 316
Query: 390 LNACRVYGKPELGRIAADNLF--KLDPNDSGNHVLLSNMFAA 429
+ ++G+ AA LF L+ NHV + A
Sbjct: 317 IVGFAIHGRAR----AAIKLFYDMLETGVKPNHVTFVGVLTA 354
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/481 (41%), Positives = 287/481 (59%), Gaps = 2/481 (0%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P+TGK H ++ G D +MYSK GL A K+FDE+PER++ +WN I
Sbjct: 14 PITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGT 73
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V G + AID F+ ++R G T + + AC+ + RQLH F +++ D +
Sbjct: 74 CVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDAD 133
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V L+D Y KC + A VF+G+ ++NDV+W S++ +VQN E G +F +
Sbjct: 134 VFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKE 193
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G+E FMISSV+ ACA +A L GR VHA+ + N FV SALVDMY KCGSI++
Sbjct: 194 MGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEE 253
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A + F + ++N+V WNAII G+A + ++ FEEM + P+ VT V VLSAC
Sbjct: 254 AYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQ--PDEVTYVAVLSAC 311
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
G V+KG F MT ++ + P HY+C+VD+LGR GLV A+E++ +MP T S+
Sbjct: 312 VHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASM 371
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WG+LL +CR++G EL IAA NLF+++P+ GN+VLL+N +AA+ +WEEA RK +K
Sbjct: 372 WGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARKSLKG 431
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
I K G SWI +K+++H F A + +H R T+I L L EEM +T+F L+D
Sbjct: 432 SEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMTKLVNKAETDFDLHD 491
Query: 506 V 506
+
Sbjct: 492 L 492
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 2/338 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+RE ++FT + A +A +QLHA A+K+ DVFVG + D+Y+K G
Sbjct: 90 MQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGS 149
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ MPERN TW++ ++ V + + F + G E + + + A
Sbjct: 150 IEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRA 209
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + L GRQ+H + R+GF N V + LVD Y KC + A V+F I KN V W
Sbjct: 210 CAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLW 269
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+++ + ++ +F ++ G++P + +VLSAC + ++ GRS + +
Sbjct: 270 NAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTR 329
Query: 241 A-CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
V N+ S +VD+ G+ G + +A KMP W +++ G+ ++A
Sbjct: 330 EHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAE 389
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
+ + + M + NYV L +A + K K
Sbjct: 390 IAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARK 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP 274
+ S+L CA+ G++ H ++ +E + + L++MY KCG I+ A F+++P
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 275 ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEK 333
ER++V WN +IG G + A+ F EM E P + T+ V+ AC+ G V
Sbjct: 61 ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQR---EGSPCSEFTVSSVVCACAAKGDVFF 117
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ ++ +K + ++D+ + G ++ A + + MP R ++ W +++
Sbjct: 118 CRQL-HAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVT-WSSIV 172
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 311/543 (57%), Gaps = 26/543 (4%)
Query: 54 MYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLIT 113
MY+K G D A ++FDEM RN+ +W A IS GR F ++ P+
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDML-VDCYPNEFA 59
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC---NEVGL---AKV 167
F + + +C G+Q+H ++ G +V V N L+ Y K N VG A
Sbjct: 60 FASVIISCD----YVCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACR 115
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
VF+ + +N VSW SM+ EE +F REG+ P S VL ACA
Sbjct: 116 VFESMEFRNLVSWNSMIAA------EEEALLLFRQLYREGLAPDWCTFSIVLKACAGFVT 169
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+V++ VKA E + + + L+ Y +CGSI ++ F+KM R++V WN++I
Sbjct: 170 ERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWNSMIKA 229
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
YA G A AL F EM P+ T+V +LSACS AG VE+G+ IF SM++ +G+
Sbjct: 230 YALHGQAKEALHLFSEMN-----VRPDSATMVALLSACSHAGLVEEGINIFDSMSMNHGV 284
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P +HYAC+VD+LGRAGL+ A E+I MPM+P VW ALL++CR YG+ +L ++AAD
Sbjct: 285 SPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAAD 344
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
L +L+P +S +V +SN++ + G + EA L+R EM ++K G SWI ++NR+H F
Sbjct: 345 KLKELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWIEIENRVHEFA 404
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
+ H + I A L L ++K GY+P+T+ AL D+EEE K ++ HHSEK+AL F
Sbjct: 405 SGGRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQEQLYHHSEKLALVFA 464
Query: 528 LIAIPP----GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
L++ G IRI KN+RIC DCH+ K S ++ +E++VRD+NRFH F + CSC+
Sbjct: 465 LMSEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDSNRFHHFKNRMCSCN 524
Query: 584 DYW 586
DYW
Sbjct: 525 DYW 527
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 23/336 (6%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKT------GLK 61
PN+F F + + V GKQ+HALALK G I V+VG + YSK+ G
Sbjct: 55 PNEFAFASVIISCDY----VCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYG 110
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
+A ++F+ M RNL +WN+ I+ + A+ F L R G PD TF L AC
Sbjct: 111 SEACRVFESMEFRNLVSWNSMIAA------EEEALLLFRQLYREGLAPDWCTFSIVLKAC 164
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ + ++ +V++GF+ + + N L+ Y +C + +K VFD + ++ VSW
Sbjct: 165 AGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWN 224
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAVK 240
SM+ Y + + + +F V P + ++LSAC+ +E G ++ ++++
Sbjct: 225 SMIKAYALHGQAKEALHLF---SEMNVRPDSATMVALLSACSHAGLVEEGINIFDSMSMN 281
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALS 299
V + + +VD+ G+ G + +A ++MP + + V W+A++ G +A
Sbjct: 282 HGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKL 341
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
+ +++ + YV + + CS E G+
Sbjct: 342 AADKLKELEPGNSLGYVQISNIY--CSGGSYNEAGL 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+ RE ++P+ TF + KA + +++ +K+G D + + Y++ G
Sbjct: 145 LYREGLAPDWCTFSIVLKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGS 204
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAF--INLRRTGGEPDLITFCAFL 118
+ ++FD+M R++ +WN+ I L G+ K A+ F +N+R PD T A L
Sbjct: 205 ISFSKQVFDKMRSRDVVSWNSMIKAYALHGQAKEALHLFSEMNVR-----PDSATMVALL 259
Query: 119 NACSDCSLLQLG 130
+ACS L++ G
Sbjct: 260 SACSHAGLVEEG 271
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 324/561 (57%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+HA LK G +D F G + A S+ G + A +F ++ E +N I V
Sbjct: 47 KQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 106
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ ++ + G EPD T+ L ACS L+ G Q+H + ++G +G+V
Sbjct: 107 NSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVF 166
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARRE 206
V NGL++ YGKC + A VVF+ + +K+ SW S++ + + E + C M L E
Sbjct: 167 VQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHA-SVEMWHECLMLLGDMSGE 225
Query: 207 GVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G ++ ++ S LSAC + GR +H + ++ E N+ V ++L+DMY K GS++
Sbjct: 226 GRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEK 285
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F M ++N + II G A G ALS F +M + P+ V V VLSAC
Sbjct: 286 GLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDM--LEEGLAPDDVVYVGVLSAC 343
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG V +G++ F + ++ IKP +HY C+VDL+GRAG++ AY++IK MP++P V
Sbjct: 344 SHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVV 403
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL+AC+V+ E+G IAA+N+FKL+ ++ G++++L+NM+A +W + +R EM +
Sbjct: 404 WRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAE 463
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+ + G S + ++ F ++D S + I M+ ++ ++K GY PD + L D
Sbjct: 464 KHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLD 523
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V+E+EK + HHS+K+A+AF LI G IRI++N+R+C DCH+ KFIS I RE+
Sbjct: 524 VDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFISVIYEREIT 583
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F DG CSC DYW
Sbjct: 584 VRDRNRFHHFKDGTCSCKDYW 604
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 15/296 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I P++FT+P + KA S L G Q+HA K+G DVFV +MY K G
Sbjct: 121 MLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGA 180
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAI--DAFINLRRTGGE----PDLITF 114
+ A +F++M E+++A+W ++++G + + + L GE +
Sbjct: 181 IEHASVVFEQMDEKSVASW-----SSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESIL 235
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ L+AC+ GR +HG L+R+ + NV+V L+D Y K + VF +
Sbjct: 236 VSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQ 295
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGR 232
KN S+ ++ + +F EG+ P D + VLSAC+ AGL E +
Sbjct: 296 KNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSH-AGLVNEGLQ 354
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+ + + ++ I +VD+ G+ G ++ A MP + N V W +++
Sbjct: 355 CFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSA 410
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 325/582 (55%), Gaps = 37/582 (6%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTGLKDDA 64
I P++FTF +FKA S L + G++ H ++ G + +VFVG + DMY+K G DA
Sbjct: 173 ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 232
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+ D++ +++ + A I G ++ F N+ + G E + T + L C +
Sbjct: 233 RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 292
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L GR +HG +V++G + + V+W S++
Sbjct: 293 EDLTSGRLIHGLIVKAGLE--------------------------------SAVTWTSVI 320
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE 244
V VQN EE F R + P F +SSVL AC+ +A LE G+ +HA+ +K ++
Sbjct: 321 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 380
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEM 304
+ +VG+AL+D YGKCGS + A FN + E ++V N++I YA G AL F M
Sbjct: 381 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 440
Query: 305 TSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRA 364
E PN VT + VLSAC+ AG +E+G IF S I+ +HYAC+VDLLGRA
Sbjct: 441 KDTGLE--PNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 498
Query: 365 GLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLS 424
G + A +I ++ + + +W LL+ACR++G E+ + + + L P D G HVLLS
Sbjct: 499 GRLKEAEMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLS 557
Query: 425 NMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLT 484
N++A+TG W + ++ M+++ +KK SW+ V+ IH F A D SH +I+ L
Sbjct: 558 NLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLE 617
Query: 485 KLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLI-AIPPGVPIRITKNL 543
+L E++K GY+PDT F L D++EE+K+ + +HSEK+A+AF L + IRI KNL
Sbjct: 618 ELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNL 677
Query: 544 RICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
R+CGDCH+ KF+S IVGR++I RD RFH F +G CSC DY
Sbjct: 678 RVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 182/388 (46%), Gaps = 39/388 (10%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++ + ALK G H + G D Y K G A K+FDE+P R++ WN+ I++ + G
Sbjct: 99 KIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 156
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD-GNVSVC 149
R K AID + + G PD TF + A SD L+ G++ HG V G NV V
Sbjct: 157 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 216
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
+ LVD Y K ++ A++V D ++ K+ V + +++V Y + E+ Q+F ++G+E
Sbjct: 217 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 276
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
++ +SSVL C + L GR +H + VKA +E
Sbjct: 277 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE------------------------- 311
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
+ V W ++I G G ++AL F +M +R PN TL VL ACS
Sbjct: 312 -------SAVTWTSVIVGLVQNGREEIALLKFRQM--LRSSITPNSFTLSSVLRACSSLA 362
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+E+G +I +++ +K+G+ A ++D G+ G + A + + +SV +
Sbjct: 363 MLEQGKQI-HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 421
Query: 390 LN-ACRVYGKPELGRIAADNLFKLDPND 416
+ A +G L + L+PN+
Sbjct: 422 YSYAQNGFGHEALQLFSGMKDTGLEPNN 449
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I+PN FT + +A S+L + GKQ+HA+ +K G D +VG + D Y K G
Sbjct: 339 MLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGS 398
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ + E ++ + N+ I + G A+ F ++ TG EP+ +T+ L+A
Sbjct: 399 TEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSA 458
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG----LVDFYGKCNEVGLAKVVFDGIIDKN 176
C++ LL+ G + S GN+ + +VD G+ + A+++ + + +
Sbjct: 459 CNNAGLLEEGCHIFSSARNS---GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISD 515
Query: 177 DVSWCSML 184
V W ++L
Sbjct: 516 VVIWRTLL 523
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 332/589 (56%), Gaps = 17/589 (2%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTG-KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
I P+ TF +FKA SS+ + + K HA ++G DV V + + Y++ G D
Sbjct: 226 IPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A K F EMPERN +W + I+ G A++ F + G P T A L C D
Sbjct: 286 ARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCED 344
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW--- 180
L++ R + G +V++ LV Y +C+ A VF + + W
Sbjct: 345 ---LRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAA 398
Query: 181 --CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-V 237
+M+ VY Q + + +++ A G+ P + + L ACA +A L GR +HA V
Sbjct: 399 LVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACV 458
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A ++ ++ +G+A+V MYG+CGS++DA AF+ MP R+ + WNA++ A G +
Sbjct: 459 AADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDC 518
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M +A + + +LSAC+ AG V+ G + F +MT +G+ P EHY C+
Sbjct: 519 CDLFRAMLQEGFDA--ERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCM 576
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGR G + A+ I++ MP+ P + W AL+ ACR+YG E GR AA+ + +L + +
Sbjct: 577 VDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHT 636
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+V L N+++A GRW++A VRK M D+G++K G S I +++++H F +D SH ++
Sbjct: 637 AAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSE 696
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I A L ++ ++ AGY T L+DVEEE+K + HSEK+A+AFG+++ P G +
Sbjct: 697 AIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTL 756
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+A KFIS + GRE++VRD RFH F DG CSC DYW
Sbjct: 757 RVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 24/409 (5%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+E I+ + F + A S+ G+ +H A+++G V + MY + G
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 63 DADKMFDEMPERNL--ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F + ER+L WNA I+ G P+ A++ F + + G PDL+TF + A
Sbjct: 181 DANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 121 CSDCSLLQLGRQLHGF---LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
CS L+ Q+ GF L +G +V V LV+ Y +C E+ A+ F + ++N
Sbjct: 240 CSSSPSLR-ASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNA 298
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW SM+ + Q + F EGV P + + L C L + R V A+
Sbjct: 299 VSWTSMIAAFTQ-IGHLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLRVARLVEAI 354
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER--NLVCWNAIIGGYAH----Q 291
A + V ++ + + LV Y +C +DA F+ E + A+I YA +
Sbjct: 355 AQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRR 414
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ ++ E S P+ + + L AC+ A+ +G +I + +
Sbjct: 415 STFKLWGAAIERGIS------PDRILYITALDACASLAALSEGRQIHACVAADRRLDRDV 468
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+V + G+ G + A + MP R IS W A+L+A +G+ E
Sbjct: 469 TLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
GK LH+ S + D ++ S MY + G + A +F ++ +++ W IS V
Sbjct: 45 GKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYV 104
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G AI F + + G D I F + L+ACS L GR +H V +G
Sbjct: 105 SRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEI 164
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS-WCSMLVVYVQNYEEENGCQMFLTARRE 206
V + LV YG+C + A +F + DV W +M+ QN ++F +
Sbjct: 165 VASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQL 224
Query: 207 GVEPKDFMISSVLSACARIAGLELG--RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G+ P SV AC+ L + HA + + ++ V +ALV+ Y +CG I
Sbjct: 225 GIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEID 284
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLS 323
A F +MPERN V W ++I + GH L + E +M E VP TL L
Sbjct: 285 CARKFFAEMPERNAVSWTSMIAAFTQIGH----LLAVETFHAMLLEGVVPTRSTLFAALE 340
Query: 324 AC 325
C
Sbjct: 341 GC 342
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 110 DLITF--CAFLNACSDCSLLQLGRQLHGFLV------RSGFDGNVSVCNGLVDFYGKCNE 161
DL +F A + +C+ + G+ LH + R G+ + + LV Y +C
Sbjct: 23 DLSSFDSAAAVRLVRECNSIARGKLLHSKISSSPSLSRDGY-----LASSLVYMYLRCGS 77
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ A VF I K+ V W ++ YV +F +EG+ + SVLSA
Sbjct: 78 LESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSA 137
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL--V 279
C+ L GR +H AV+A + V SALV MYG+CGS++DA F + ER+L V
Sbjct: 138 CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVV 196
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG-MKIF 338
WNA+I + G AL F M + P+ VT V V ACS + ++ +K F
Sbjct: 197 LWNAMITANSQNGSPREALEIFYRMLQLGIP--PDLVTFVSVFKACSSSPSLRASQVKGF 254
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ + G+ +V+ R G +D A + EMP R +S W +++ A
Sbjct: 255 HACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVS-WTSMIAA 307
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/494 (40%), Positives = 287/494 (58%), Gaps = 3/494 (0%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
NAI + + G P+ F L AC+ L LG+ +HG LV+ GFD ++ V N +V
Sbjct: 92 NAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMV 151
Query: 154 DFYGKCNE-VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
Y C+ + A+ +FD + + V+W +M+ Y + + +F + GV P D
Sbjct: 152 HMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDD 211
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ SVLSAC + LELG+ + + K V + + +ALVDM+ KCG + A F
Sbjct: 212 VTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRN 271
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M +R +V W ++I G A G A+S FEEM + VP + + +LSACS +G VE
Sbjct: 272 MSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKA--SGMVPEDIAFIGLLSACSHSGLVE 329
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G + F MT ++GI P EHY C+VDLL RAGLV A E ++ MP+ P +W L++A
Sbjct: 330 RGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISA 389
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CRV+G+ +LG + L + +P N+VLLSN++ WE+ +R M GI+K
Sbjct: 390 CRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVP 449
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKM 512
G + I + N IH F D SH + EI M+ ++ EMK AGY P T D++EE+K
Sbjct: 450 GSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKE 509
Query: 513 TEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRF 572
+ HSEK+A+AF L+ PPG PIRITKNLR+CGDCHSA KFIS I RE+++RD +RF
Sbjct: 510 DALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRF 569
Query: 573 HRFWDGYCSCSDYW 586
H F DG CSC D+W
Sbjct: 570 HHFRDGQCSCGDFW 583
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 3/316 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK-TGLKDDA 64
ISPN + FP + KA + L GK +H +K G D+FV + MY +G + A
Sbjct: 105 ISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFA 164
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
K+FDEMP+ + TW A I G+ A+ F ++ G PD +T + L+AC+D
Sbjct: 165 RKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDL 224
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L+LG+ + ++ + V + N LVD + KC +V A +F + + VSW S++
Sbjct: 225 GALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVI 284
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-V 243
V + +F + G+ P+D +LSAC+ +E GR + + +
Sbjct: 285 VGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGI 344
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFE 302
I +VD+ + G + +A +MP E N + W +I G + S +
Sbjct: 345 VPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISK 404
Query: 303 EMTSMRCEAVPNYVTL 318
++ NYV L
Sbjct: 405 QLIRNEPMHESNYVLL 420
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 9/286 (3%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK-- 175
L+ C+ L QLH +++ GF N V + + A + + D
Sbjct: 11 LDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARV 70
Query: 176 -NDVSWCSMLVVYVQNYEEENGCQMFLTARR-EGVEPKDFMISSVLSACARIAGLELGRS 233
+ + +++ Y ++ + ++ + G+ P + VL ACA + L LG++
Sbjct: 71 YDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKA 130
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKC-GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH VK + +IFV + +V MY C G ++ A F++MP+ + V W A+IGGYA G
Sbjct: 131 VHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLG 190
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+ A+ F +M P+ VT+V VLSAC+ GA+E G K S K + E
Sbjct: 191 QSAGAVGLFRKMQI--AGVCPDDVTMVSVLSACTDLGALELG-KWIESYIEKERVLKTVE 247
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
+VD+ + G VD+A + + M R TI W +++ ++G+
Sbjct: 248 LSNALVDMFAKCGDVDKALGLFRNMSKR-TIVSWTSVIVGLAMHGR 292
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 321/561 (57%), Gaps = 7/561 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ+HA LK G +D F G + A S+ G + A +F ++ E +N I V
Sbjct: 48 KQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNV 107
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
+ A+ ++ + G EPD T+ L ACS L+ G Q+H + ++G + +V
Sbjct: 108 NSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVF 167
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFL-TARRE 206
V NGL+ YGKC + A VVF+ + +K+ SW S++ + + E + C M L E
Sbjct: 168 VQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHA-SVEMWHECLMLLGDMSGE 226
Query: 207 GVE-PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G ++ ++ S LSAC + LGR +H + ++ E N+ V ++L+DMY KCGS++
Sbjct: 227 GRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEK 286
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F M +N + +I G A G A+ F +M + P+ V V VLSAC
Sbjct: 287 GLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDM--LEEGLTPDDVVYVGVLSAC 344
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG V +G++ F M ++ IKP +HY C+VDL+GRAG++ AY++IK MP++P V
Sbjct: 345 SHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVV 404
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W +LL+AC+V+ E+G IAA+N+F+L+ ++ G++++L+NM+A +W +R EM +
Sbjct: 405 WRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAE 464
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
+ + G S + ++ F ++D S I M+ ++ ++K GY PD + L D
Sbjct: 465 KHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLD 524
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V+E+EK + HHS+K+A+AF LI G PIRI++NLR+C DCH+ KFIS I RE+
Sbjct: 525 VDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIYEREIT 584
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F DG CSC DYW
Sbjct: 585 VRDRNRFHHFKDGTCSCKDYW 605
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P++FT+P + KA S L G Q+HA K+G DVFV MY K G + A
Sbjct: 127 IEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAG 186
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAI--DAFINLRRTGGE----PDLITFCAFLN 119
+F++M E+++A+W ++++G + + + L GE + + L+
Sbjct: 187 VVFEQMDEKSVASW-----SSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALS 241
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
AC+ LGR +HG L+R+ + NV V L+D Y KC + VF + KN S
Sbjct: 242 ACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYS 301
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--ELGRSVHAV 237
+ M+ + ++F EG+ P D + VLSAC+ AGL E + + +
Sbjct: 302 YTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSH-AGLVNEGLQCFNRM 360
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGG 287
+ ++ I +VD+ G+ G +++A MP + N V W +++
Sbjct: 361 QFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSA 411
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 318/590 (53%), Gaps = 35/590 (5%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
+Q+H LK+G I D AF +G A +FD + N WN I
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+ A+ + ++ + TF L ACS S + +Q+H +++ GF +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIY 154
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE------------- 194
N L++ Y K ++ A+++FD + ++ VSW SM+ Y + E E
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 195 --------NGC----------QMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+GC +F + G++ + + S L ACA + L+ G+ +HA
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHA 274
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
K +E + +G L+DMY KCG +++A F KM E+ + W A+I GYA G
Sbjct: 275 YIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F +M + E PN +T +L+ACS AG V + +F SM +G KP EHY C
Sbjct: 335 ALEWFMKMQTAGVE--PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAGL+ A E+I+ MP++P ++WGALLNAC ++G ELG+ L ++DP
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGH 452
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERN 476
G ++ L+++ AA G W +A VR++MK+ G+ K GCS ISV H F A D SH +
Sbjct: 453 GGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQI 512
Query: 477 TEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVP 536
EI ML ++ E ++ GY P L D+E++EK T + HHSEK+A+ FGLI+ PG+
Sbjct: 513 KEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMT 572
Query: 537 IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
IRI KNLR+C DCH+ K IS + RE+++RD RFH F DG C+C DYW
Sbjct: 573 IRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 147/325 (45%), Gaps = 47/325 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG- 59
M + N +TFP L KA S++ +Q+HA +K G +++ S ++YSK+G
Sbjct: 109 MLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGD 168
Query: 60 ------LKDDADK------------------------MFDEMPERNLATWNAYISNAVLG 89
L D D+ +F+ MPERN+ +W + IS V
Sbjct: 169 IKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGA 228
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+PK A++ F ++ G + D + + L AC+D +L G+ +H ++ + + + +
Sbjct: 229 GKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+D Y KC ++ A VF + +K W +M+ Y + + F+ + GVE
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 210 PKDFMISSVLSACARIAGL--------ELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG 261
P + +L+AC+ AGL E +H K +E +VD+ G+ G
Sbjct: 349 PNQMTFTGILTACSH-AGLVHEAKLLFESMERIH--GFKPSIEHY----GCMVDLLGRAG 401
Query: 262 SIQDAEIAFNKMPER-NLVCWNAII 285
+++AE MP + N W A++
Sbjct: 402 LLKEAEELIENMPVKPNAAIWGALL 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 40/364 (10%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA--KVVFDGIIDK 175
L+ CS ++ RQ+HG ++++G + + L+ F N LA + VFD I
Sbjct: 22 LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W +M+ Y + E E ++ V + +L AC+ ++ E + +H
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIH 141
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K I+ ++L+++Y K G I+ A + F+++ +R+ V WN++I GY G +
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIE 201
Query: 296 MALSSFEEM--------TSMRC---------EAVPNY------------VTLVCVLSACS 326
MA F M TSM EA+ + V LV L AC+
Sbjct: 202 MAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACA 261
Query: 327 RAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW 386
G +++G K ++ K+ I+ ++D+ + G ++ A E+ ++M + +SVW
Sbjct: 262 DLGVLDQG-KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK-GVSVW 319
Query: 387 GALLNACRVYGKPELGRIAADNLFKLDPND-SGNHVLLSNMFAA---TGRWEEADLVRKE 442
A+++ ++G+ GR A + K+ N + + + A G EA L+ +
Sbjct: 320 TAMISGYAIHGR---GREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 443 MKDV 446
M+ +
Sbjct: 377 MERI 380
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/598 (35%), Positives = 320/598 (53%), Gaps = 43/598 (7%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDM---------YSKTGLKDDADKMFDEMPERNLATWN 80
K +H L++ I DVFV + + T L A +F ++ NL +N
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQIQNPNLFVFN 88
Query: 81 AYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS 140
I G P A + + ++ PD ITF + A ++ + +G Q H +VR
Sbjct: 89 VLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRF 148
Query: 141 GFDGNVSVCNGLVDFYG-------------------------------KCNEVGLAKVVF 169
GF +V V N LV Y KC V A+ +F
Sbjct: 149 GFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMF 208
Query: 170 DGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLE 229
D + +N +W M+ Y +N E +F +REGV + ++ SV+S+CA + LE
Sbjct: 209 DEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALE 268
Query: 230 LGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYA 289
G H VK+ + N+ +G+ALVDMY +CG I+ A F ++P+++ + W++II G A
Sbjct: 269 FGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLA 328
Query: 290 HQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKP 349
GHA A+ F +M +R P +TL VLSACS G V+KG++I+ +M YGI+P
Sbjct: 329 VHGHAHKAIHYFSQM--VRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEP 386
Query: 350 GAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
EHY C+VD+LGRAG + A I +MP++P + GALL AC++Y E+ + L
Sbjct: 387 RLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNML 446
Query: 410 FKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ-A 468
++ P SG +VLLSN++A G+WE+ + +R MK+ +KK G S I + +I+ F
Sbjct: 447 IEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMG 506
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGL 528
D H +I+ + ++ +++ GY +T A +DV+EEEK T + HSEK+A+A+G+
Sbjct: 507 DDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGM 566
Query: 529 IAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ G IRI KNLR+C DCH+A K IS + GRE IVRD NRFH F +G CSC DYW
Sbjct: 567 MKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS---- 56
M + I P++ TFP L KAS+ + V G+Q H+ ++ G +DV+V S MY+
Sbjct: 110 MLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGL 169
Query: 57 ---------------------------KTGLKDDADKMFDEMPERNLATWNAYISNAVLG 89
K G+ +DA +MFDEMP RNL TW+ I+
Sbjct: 170 IAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKN 229
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
+ AID F ++R G + + +++C+ L+ G + H ++V+S N+ +
Sbjct: 230 NCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILG 289
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y +C E+ A VF+ + DK+ +SW S++ + F R G
Sbjct: 290 TALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFS 349
Query: 210 PKDFMISSVLSACARIAGLELGRSVHA-VAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P+D +++VLSAC+ ++ G ++ + +E + +VDM G+ G + +AE
Sbjct: 350 PRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAEN 409
Query: 269 AFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPN---YVTLVCVLSA 324
KMP + N A++G + ++A E + +M E P Y L+ + A
Sbjct: 410 FILKMPVKPNAPILGALLGACKIYKNTEVA----ERVGNMLIEVKPEHSGYYVLLSNIYA 465
Query: 325 CSRAGAVEK 333
C AG EK
Sbjct: 466 C--AGQWEK 472
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 47/322 (14%)
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV---------DFYGKCNEVGLAK 166
A L +CS S L++ +HGFL+R+ +V V + L+ F+ N +G A
Sbjct: 17 ALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAY 73
Query: 167 VVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIA 226
+F I + N + ++ + E + + + P + ++ A +
Sbjct: 74 GIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEME 133
Query: 227 GLELGRSVHAVAVKACVEGNIFVGSALVDMYG---------------------------- 258
+ +G H+ V+ + +++V ++LV MY
Sbjct: 134 CVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVA 193
Query: 259 ---KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNY 315
KCG ++DA F++MP RNL W+ +I GYA + A+ FE M R V N
Sbjct: 194 GYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMK--REGVVANE 251
Query: 316 VTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIK 375
+V V+S+C+ GA+E G + + +K + +VD+ R G +++A + +
Sbjct: 252 TVMVSVISSCAHLGALEFGERA-HEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFE 310
Query: 376 EMPMRPTISVWGALLNACRVYG 397
E+P + ++S W +++ V+G
Sbjct: 311 ELPDKDSLS-WSSIIKGLAVHG 331
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 287/493 (58%), Gaps = 2/493 (0%)
Query: 94 NAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLV 153
+++ + + + G PD TF L + + +LG+ +H +++ GF+ NV V LV
Sbjct: 125 HSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALV 184
Query: 154 DFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+ YG C+ V A+ VFD I D+N VSW +++ Y N +F + G +P +
Sbjct: 185 NMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEV 244
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
+ VL ACA + L GR + + N+FVG+AL+DMY KCG + +AE F M
Sbjct: 245 TMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAM 304
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+N+ WN +I GYA G + AL +F M + + P+ VT + VL AC G V +
Sbjct: 305 RVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFK--PDEVTFLGVLCACCHQGLVNE 362
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G F SM ++G++P EHY C+VDLLGRAG +D A ++I+ M M+P +W LL AC
Sbjct: 363 GRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGAC 422
Query: 394 RVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAG 453
R++G +LG A L +L+PN+ N+VLL+N++A RW++ VR+ M ++K G
Sbjct: 423 RIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPG 482
Query: 454 CSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMT 513
CS I + N ++ F + E+ +L + +++K AGY+ DT A YD+EEEEK
Sbjct: 483 CSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEH 542
Query: 514 EVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFH 573
+ +HSEK+ALAFGL+ P G+ +RI KNLRIC DCH FK +S + R++ VRD NRFH
Sbjct: 543 SLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFH 602
Query: 574 RFWDGYCSCSDYW 586
F G CSC DYW
Sbjct: 603 HFVGGACSCKDYW 615
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 167/393 (42%), Gaps = 26/393 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + I P+ TFP + K+ + L GK +H ++ G +V+V + +MY
Sbjct: 133 MWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSS 192
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA ++FDE+P+RN+ +WNA I+ + ID F ++ G +P +T L A
Sbjct: 193 VSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLA 252
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ L GR + ++ + NV V L+D Y KC V A+ +F + KN +W
Sbjct: 253 CAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTW 312
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAV 239
++ Y N E+ Q F E +P + VL AC + GR+ ++
Sbjct: 313 NVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKE 372
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+ + I +VD+ G+ G + +A+ M + + + W ++G G+ +
Sbjct: 373 EFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGE 432
Query: 299 SSFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGM-----------------KIF 338
+ +++ + NYV L + + R G V + M +
Sbjct: 433 FAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVV 492
Query: 339 YSMTLKYGIKPGAEH-YACVVDL---LGRAGLV 367
Y + IKPG E Y + D+ L AG V
Sbjct: 493 YEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYV 525
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWC-SMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+DF + + ++F D C SM+ Y + + + ++ + G+ P
Sbjct: 81 LIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFP 140
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+VL + A++ ELG+++H ++ E N++V +ALV+MYG C S+ DA F
Sbjct: 141 DSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVF 200
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGA 330
+++P+RN+V WNA+I GY H + F EM A P VT+V VL AC+ GA
Sbjct: 201 DEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQI--AGAKPVEVTMVGVLLACAHLGA 258
Query: 331 VEKGMKI---FYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
+ +G I L+ + G ++D+ + G+VD A +I K M ++ + W
Sbjct: 259 LNQGRWIDDYIDHNRLRLNVFVG----TALIDMYAKCGVVDEAEKIFKAMRVK-NVYTWN 313
Query: 388 ALLNACRVYGKPE 400
L++ + G+ E
Sbjct: 314 VLISGYAMNGRGE 326
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/588 (38%), Positives = 317/588 (53%), Gaps = 17/588 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALAL----------KSGQIHDVFVGCS 50
M+ + PN T L + G +HA + KS V +G +
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 51 AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--- 107
DMY+K G A ++FD MP RN TW+A I VL R A F + G
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 108 EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKV 167
P I + L AC+ L++G QLH L +SG +++ N L+ Y K + A
Sbjct: 224 SPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281
Query: 168 VFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
+FD + K+ VS+ +++ YVQN E +F + VEP + S++ AC+ +A
Sbjct: 282 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
L+ GR H + + + +AL+DMY KCG I + FN MP R++V WN +I G
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGI 347
Y G A + F EM ++ P+ VT +C+LSACS +G V +G F+ M YG+
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFP--PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGL 459
Query: 348 KPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
P EHY C+VDLL R G +D AYE I+ MP+R + VW ALL ACRVY +LG+ +
Sbjct: 460 TPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSR 519
Query: 408 NLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ 467
+ +L P +GN VLLSN+++A GR++EA VR K G KK GCSWI + +H F
Sbjct: 520 MIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFV 579
Query: 468 AKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFG 527
D SH ++ EI L + +K GY PDT+F L D+EEEEK + HSEK+A+A+G
Sbjct: 580 GGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYG 639
Query: 528 LIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
++++ I +TKNLR+CGDCH+ K IS + R +IVRD NRFH F
Sbjct: 640 ILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 209/433 (48%), Gaps = 26/433 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN++TFP KA SAL G+ +H A+ +G D+FV + DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFL 118
DA +F MP R+L WNA ++ G +A+ ++++ P+ T A L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGN----------VSVCNGLVDFYGKCNEVGLAKVV 168
+ L G +H + +R+ N V + L+D Y KC + A+ V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 169 FDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG---VEPKDFMISSVLSACARI 225
FD + +N+V+W +++ +V +F +G + P I+S L ACA +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS--IASALRACASL 238
Query: 226 AGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAII 285
L +G +HA+ K+ V ++ G++L+ MY K G I A F++M ++ V ++A++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 286 GGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKY 345
GY G A+ A F++M + C P+ T+V ++ ACS A++ G S+ ++
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQA--CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR- 355
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIA 405
G+ ++D+ + G +D + ++ MP R +S W ++ YG LG+
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAG---YGIHGLGK-E 410
Query: 406 ADNLFKLDPNDSG 418
A LF L+ N+ G
Sbjct: 411 ATALF-LEMNNLG 422
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 324/561 (57%), Gaps = 10/561 (1%)
Query: 30 KQLHALALK---SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNA 86
KQ+HA LK S ++ C+ D G D A +F ++ + +N I
Sbjct: 5 KQVHAQVLKWENSFCASNLVATCALSDW----GSMDYACSIFRQIDQPGTFEFNTMIRGY 60
Query: 87 VLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNV 146
V +NA+ + + G E D T+ A AC+ ++ G Q+HG++ + G +G++
Sbjct: 61 VNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDL 120
Query: 147 SVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARRE 206
V N L++ YGKC ++ L+ VF+ + ++ SW +++ + +F RE
Sbjct: 121 FVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSRE 180
Query: 207 G-VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
G P++ ++ SVLSAC + L+LGR H ++ E N+ V ++L+DMY KCG I+
Sbjct: 181 GSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEK 240
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
F +M ++N + ++ +I G A G AL F +M + P+ V + VLSAC
Sbjct: 241 GLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLK--PDDVVYLGVLSAC 298
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
+ AG V++G++ F M L++GI+P +HY C+V L+GRAG++++A E I+ MP++P V
Sbjct: 299 NHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVV 358
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
W LL+AC+ + E+G IAA +L +L+ ++ G++V+LSNM+A RWE+ +R EM
Sbjct: 359 WRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMAR 418
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G + G S + V+ +I+ F ++D SH + + M+ ++ ++K GY PDT+ L+D
Sbjct: 419 KGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFD 478
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V+EEEK + HS+K+A+AF LI G PIRI +NLR+C DCH+ K IS I RE+
Sbjct: 479 VDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREIT 538
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
VRD NRFH F DG CSC DYW
Sbjct: 539 VRDRNRFHHFKDGTCSCRDYW 559
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 3/331 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ ++FT+P LFKA ++L G Q+H K G D+FV S +MY K G + +
Sbjct: 81 VESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSC 140
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
+F+ M R++A+W+A I+ G + F + R G P+ + L+AC+
Sbjct: 141 SVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHL 200
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSML 184
L LGR H L+R+ + NV V L+D Y KC + +F ++ KN +S+ M+
Sbjct: 201 GALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMI 260
Query: 185 VVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACV 243
+ Q+F EG++P D + VLSAC ++ G + + + ++ +
Sbjct: 261 TGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGI 320
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHADMALSSFE 302
E I +V + G+ G + A MP + N V W ++ + ++ + +
Sbjct: 321 EPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAK 380
Query: 303 EMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+ + +YV L + + R V K
Sbjct: 381 SLGELNSSNPGDYVVLSNMYARAKRWEDVAK 411
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 325/585 (55%), Gaps = 8/585 (1%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ T+ L + ++ G+ LH + F+G + MY G D A K
Sbjct: 55 PDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKA 114
Query: 68 FDEMPERN-LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
FD + RN +WN+ I+ K A+ F + G +P+ +TF + L+A +
Sbjct: 115 FDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGA 174
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKC-----NEVGLAKVVFDGIIDKNDVSWC 181
L G +H ++ + + +V L++F+GKC + + +FD + D++DVSW
Sbjct: 175 LPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWS 234
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
+++ Y Q+ + ++F EG +P F SV+ AC +++ L GR +H+ + +
Sbjct: 235 TLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIMNS 294
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
++ ++ + + +V+M+G+CGS++++ AF +M +R+ V W+ +I +AH GH AL +F
Sbjct: 295 ALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAEALETF 354
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M P+ +T V +LS C+ AG + M Y + PG +HY C+VDLL
Sbjct: 355 LAMNLD--GQTPDELTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPGLDHYVCLVDLL 412
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
R+G + A E+++ MP P S W LL AC++ G + G + DP+ S +
Sbjct: 413 CRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLATDPDTSAPYA 472
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLS+++A R E +VRK M++ GIKK AGCS+I V +R+H F+A + SH R+ +I
Sbjct: 473 LLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSYIEVHDRVHEFKAGEVSHPRHRDILY 532
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L +++ +M AG + DT YD+EEEEK + +HSEK+A+ GL+ PG +R+ K
Sbjct: 533 ELMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLLTYHSEKLAIGLGLVTTRPGTELRVVK 592
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+C DCH+A KFIS I GR ++VRD NRFH F DG CSC+DYW
Sbjct: 593 NLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFEDGVCSCNDYW 637
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 15/314 (4%)
Query: 90 GRPKNAIDAFINLRRTGGE-----PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G P +NL + G+ PDL T+ + L C+ L LG+ LH + R FDG
Sbjct: 31 GDPGLLKATILNLCKNSGDDPSSKPDLETYASLLRQCASARALDLGQLLHEEIARRRFDG 90
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-VSWCSMLVVYVQNYEEENGCQMFLTA 203
+ N L+ YG C +V AK FD I +N+ VSW SM+ Y QN + ++F
Sbjct: 91 YTFLGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAM 150
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC--- 260
+G +P S L A + L G ++H ++ E + V +AL++ +GKC
Sbjct: 151 DLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYC 210
Query: 261 --GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
G + F++M +R+ V W+ ++G YA ++ F++M + P T
Sbjct: 211 QSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYK--PTRFTF 268
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ V+ AC + A+ +G ++ +S + +K +V++ GR G V+ + +EM
Sbjct: 269 MSVVDACGKLSALREG-RVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEML 327
Query: 379 MRPTISVWGALLNA 392
R +S W +++A
Sbjct: 328 QRDAVS-WSIMISA 340
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M E P FTF + A L G+ LH+ + S DV + +M+ + G
Sbjct: 256 MDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGS 315
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+++ F EM +R+ +W+ IS G A++ F+ + G PD +TF + L+
Sbjct: 316 VEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSV 375
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG------LVDFYGKCNEVGLAKVVFDGI-I 173
C+ LL R G LV G+ ++ G LVD + +G A+ + + +
Sbjct: 376 CAHAGLL---RDARGHLV--DMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPY 430
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQM---FLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ + +W ++L + + G ++ FL + P ++SS+ + R+ + +
Sbjct: 431 EPHGSAWLTLLAACKMQGDLKRGARVGKSFLATDPDTSAPY-ALLSSIYAEAKRVNEMRI 489
Query: 231 GR 232
R
Sbjct: 490 VR 491
>gi|242078125|ref|XP_002443831.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
gi|241940181|gb|EES13326.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
Length = 688
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/557 (36%), Positives = 316/557 (56%), Gaps = 11/557 (1%)
Query: 39 SGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDA 98
SG D++ Y + G+ +A + FD MP+RN TW + V G+P+ A+
Sbjct: 134 SGFDLDLYTHNHVLRTYLECGMLAEARRAFDGMPDRNGVTWGIMMGGLVDRGQPRAALAL 193
Query: 99 FINL---RRTGGE---PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS---VC 149
F + GG+ P + L A + + G+QLH +V++G G+V+ +
Sbjct: 194 FREMLLAEEAGGDGDAPPPRSLVVALRAATASGSARAGQQLHCCVVKAGACGDVADRYLA 253
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
L+D Y KC + A+ VFDG+ + V+W SML YV + E +++ R V
Sbjct: 254 CALLDMYSKCGLIDEARRVFDGLPRASVVAWNSMLAAYVLHGRSEEALELYQEMCRSRVA 313
Query: 210 PKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIA 269
F S++L +R+ LE + HA ++ + +I +ALVD+Y K G ++DA
Sbjct: 314 MDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRMEDARNV 373
Query: 270 FNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
F +MP RNL+ WNA+I GY + G D A+ FE + + VPN+VT + VL+AC +G
Sbjct: 374 FERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAE--GVVPNHVTFLAVLNACRFSG 431
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
V+KG +IF MT +KP A HYACV++L GR GL+D AY +I+ P PT ++WGAL
Sbjct: 432 LVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREGLLDEAYSMIRRAPFTPTANMWGAL 491
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L A R++ L ++AA+ L ++P ++ +L N++ ++GR ++A V + +K G+
Sbjct: 492 LTASRIHKNMHLAKLAAEQLLAMEPEKINSYAVLLNLYVSSGRQDDACKVVETLKRKGLY 551
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEE 509
C+WI+VK H F KDT H ++ EI L L ++++ AGY+ + N L D+ +
Sbjct: 552 IHNACTWITVKKTDHKFFFKDTLHPQSAEIYRRLHTLMKDVREAGYVAEENELLPDIYPD 611
Query: 510 EKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDN 569
E+ +HSE++A+AFGL++ P P+RI ++ R+C DCH KF++ + RE++VRD
Sbjct: 612 EQKVSSAYHSERLAIAFGLMSTAPQTPLRINQSHRLCRDCHKVIKFVAEVTKREIVVRDG 671
Query: 570 NRFHRFWDGYCSCSDYW 586
+RFH F G CSC DYW
Sbjct: 672 SRFHHFKLGICSCGDYW 688
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++ + FTF + S L + KQ HA ++ G D+ + D+Y K G
Sbjct: 307 MCRSRVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGR 366
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA +F+ MP RNL +WNA I+ G AI+ F L G P+ +TF A LNA
Sbjct: 367 MEDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAEGVVPNHVTFLAVLNA 426
Query: 121 CSDCSLLQLGRQL---------------------------------HGFLVRSGFDGNVS 147
C L+ G+++ + + R+ F +
Sbjct: 427 CRFSGLVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREGLLDEAYSMIRRAPFTPTAN 486
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGII---DKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ L+ + LAK+ + ++ + S+ +L +YV + +++ C++ T +
Sbjct: 487 MWGALLTASRIHKNMHLAKLAAEQLLAMEPEKINSYAVLLNLYVSSGRQDDACKVVETLK 546
Query: 205 REGV 208
R+G+
Sbjct: 547 RKGL 550
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 324/595 (54%), Gaps = 12/595 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHI-PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E P+ T + A S L + T L D +G + Y+++
Sbjct: 210 MNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSN 269
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A FD + ++ +WNA + + RP+ A+ F + G P + TF L
Sbjct: 270 DLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALT 329
Query: 120 ACS---DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI--ID 174
AC+ + +G+++ L +G +G+ +V N ++ Y KC + A+ VF+ I
Sbjct: 330 ACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTR 389
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRS 233
++ ++W SML Y + + ++F E V+P +VL A + GR
Sbjct: 390 RDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGRE 449
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQ 291
+HA V E + + +AL++MY KCGS+ DA+ F+K + +++ W +++ GYA
Sbjct: 450 IHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQY 509
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A+ AL F M PN++T + L+AC+ G +E+G ++ MT +GI P +
Sbjct: 510 GQAERALKLFWTMQQQGVR--PNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPAS 567
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+H++C+VDLLGR G +D A ++++ I+ W ALL+AC+ + E G A+ + +
Sbjct: 568 KHFSCIVDLLGRCGRLDEAEKLLERTSQADVIT-WMALLDACKNSKELERGERCAERIMQ 626
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP + ++++L++M+AA GRW EA +RK M D GI+ GCS + V +H F A D
Sbjct: 627 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDK 686
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH ++ EI L +L +KAAGY+ DT L+DV +E K + HSEK+A+AFGL++
Sbjct: 687 SHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMST 746
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P G P+R+ KNLR+C DCH+A K IS + GR++++RD++R+H F G CSC DYW
Sbjct: 747 PSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 189/425 (44%), Gaps = 41/425 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN L A S L G+++H+ + +G + MYSK G DA
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 66 KMFDEMP---ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLITFCAFLNAC 121
+ FD +P +R++ TWNA IS + G + A+ F ++ G P + +TF + L++C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 122 SDCSLLQLG--RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND-- 177
+ LL L R +HG +V +G + V LVD YGK + A VF + K+D
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF---LRKSDEE 179
Query: 178 -----VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
V+ +M+ QN + ++F EG +P + SVL+AC+ L +G
Sbjct: 180 PSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSM---LPVGS 236
Query: 233 SV-----HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
+ A+ V + N+ G+ L+ Y + + A F+ + ++V WNA+
Sbjct: 237 ATAFVLEQAMEVVSATRDNVL-GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAA 295
Query: 288 YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS-----RAGAVEKGMKIFYSM 341
Y AL FE M E V P+ T + L+AC+ A A+ K ++ S+
Sbjct: 296 YLQHHRPREALVLFERML---LEGVRPSVATFITALTACAAYPPQTASAIGKRIQ---SL 349
Query: 342 TLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPE 400
+ G++ +++ + G + A + + + P R W ++L A YG
Sbjct: 350 LEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA---YGHHG 406
Query: 401 LGRIA 405
LG+ A
Sbjct: 407 LGKEA 411
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/546 (36%), Positives = 322/546 (58%), Gaps = 4/546 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ I PN FT+PC+ + + G+Q+H+L++K+G D++V DMYSK G
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A ++ + + E+++ +W + I+ V K+A+ AF +++ G PD I + ++
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + ++ G Q+H + SG+ G+VS+ N LV+ Y +C + A F+ + K+ ++
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITG 515
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++ + Q+ E ++F+ + GV+ F S LSA A +A ++ G+ +HA +K
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
VG+AL+ +YGKCGS +DA++ F++M ERN V WN II + G AL
Sbjct: 576 TGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDL 635
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F++M E + PN VT + VL+ACS G VE+G+ F SM+ +YGI+P +HYACV+D
Sbjct: 636 FDQMKK---EGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGN 419
+ GRAG +DRA + I+EMP+ VW LL+AC+V+ E+G AA +L +L+P+DS +
Sbjct: 693 IFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSAS 752
Query: 420 HVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEI 479
+VLLSN +A T +W D VRK M+D G++K G SWI VKN +H F D H +I
Sbjct: 753 YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQI 812
Query: 480 QAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRI 539
L + + + GY + +D E+E + HSEK+A+ FGL+++PP +P+R+
Sbjct: 813 YNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRV 872
Query: 540 TKNLRI 545
KNLR+
Sbjct: 873 IKNLRV 878
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 190/384 (49%), Gaps = 3/384 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R + P + + + + + G+ +HA K G ++FVG + +Y + G
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS 193
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+++F +MP R+ T+N IS G ++A++ F ++ +G PD +T + L A
Sbjct: 194 FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAA 253
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ LQ G QLH +L ++G + + L+D Y KC +V A V+F+ N V W
Sbjct: 254 CASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
MLV + Q + ++F + G+ P F +L C ++LG +H+++VK
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVK 373
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
E +++V L+DMY K G ++ A + E+++V W ++I GY AL++
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+EM +C P+ + L +S C+ A+ +G++I + + G + +V+L
Sbjct: 434 FKEM--QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNL 490
Query: 361 LGRAGLVDRAYEIIKEMPMRPTIS 384
R G + A+ +EM ++ I+
Sbjct: 491 YARCGRIREAFSSFEEMELKDGIT 514
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 198/418 (47%), Gaps = 6/418 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ +SP+ T L A ++L G QLH+ K+G D + S D+Y K G
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+ A +F+ N+ WN + + + F ++ G P+ T+ L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+ + LG Q+H V++GF+ ++ V L+D Y K + A+ V + + +K+ VSW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
SM+ YVQ+ ++ F ++ G+ P + ++S +S CA I + G +HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+ G++ + +ALV++Y +CG I++A +F +M ++ + N ++ G+A G + AL
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F M + N T V LSA + +++G +I ++ +K G E ++ L
Sbjct: 535 FMRMDQSGVKH--NVFTFVSALSASANLAEIKQGKQI-HARVIKTGHSFETEVGNALISL 591
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK--LDPND 416
G+ G + A EM R +S W ++ +C +G+ D + K + PND
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 180/361 (49%), Gaps = 6/361 (1%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
++HA A+ G VG D+YSK GL A ++F+E+ R+ +W A +S G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+ A+ + + R G P + L++C+ L GR +H + GF + V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
++ Y +C LA+ VF + ++ V++ +++ + Q E+ ++F + G+ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
ISS+L+ACA + L+ G +H+ KA + + + +L+D+Y KCG ++ A + F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAG 329
N N+V WN ++ + G + SFE M+ + PN T C+L C+
Sbjct: 303 NSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
++ G +I +S+++K G + ++D+ + G +++A +++ + + +S W ++
Sbjct: 360 EIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS-WTSM 417
Query: 390 L 390
+
Sbjct: 418 I 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 155/323 (47%), Gaps = 5/323 (1%)
Query: 71 MPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC-SDCSLLQL 129
M R A+ ++ + P + F + R G + F L AC + Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQ 189
++H V G V N L+D Y K V A+ VF+ + +++VSW +ML Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
N E ++ R GV P +++SSVLS+C + GR +HA K IFV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
G+A++ +Y +CGS + AE F MP R+ V +N +I G+A GH + AL FEEM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P+ VT+ +L+AC+ G ++KG ++ +S K GI ++DL + G V+
Sbjct: 241 S--PDCVTISSLLAACASLGDLQKGTQL-HSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 370 AYEIIKEMPMRPTISVWGALLNA 392
A I R + +W +L A
Sbjct: 298 ALVIFNSSD-RTNVVLWNLMLVA 319
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 304/543 (55%), Gaps = 3/543 (0%)
Query: 44 DVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR 103
DV S + G +DA ++F++MP RN+ +W + I GR A+ F +
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML 232
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
+ CA L AC++ +G Q+HG +V++G+ N + L+ FY C +
Sbjct: 233 ASFKATSSTLACA-LTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLID 291
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACA 223
A +F+ + +N V W ++L Y N + Q+F R V P ++S L++C
Sbjct: 292 NASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCC 351
Query: 224 RIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNA 283
+ ++ GR VHAVA K +E +IFV ++LV MY KCG I D F +M +N+V WN+
Sbjct: 352 GLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNS 411
Query: 284 IIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTL 343
II G A G AL+ F +M R + P+ +TL +LSAC +G + KG F
Sbjct: 412 IIVGCAQHGFGRWALTLFAQMIRTRVD--PDEITLAGLLSACGHSGMLTKGRCFFKHFGK 469
Query: 344 KYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGR 403
+GI+ EHY+ +VDLLGR G ++ A +I MP + VW ALL++ + +
Sbjct: 470 NFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAE 529
Query: 404 IAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRI 463
AA + L PN S + LLSN++A+TG+W E +RK+MKD GI K G SWI++K
Sbjct: 530 RAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIK 589
Query: 464 HIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
H F + D SH + +I L L ++K GY+PD F+ +DVE E+K + +HSE++A
Sbjct: 590 HNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLA 649
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+ FGLI+ G I + KNLRICGDCH+A K S +VGRE++VRD +RFH F +G CSC
Sbjct: 650 IGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCG 709
Query: 584 DYW 586
DYW
Sbjct: 710 DYW 712
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 196/438 (44%), Gaps = 36/438 (8%)
Query: 12 TFPCLF--KASSALHIPVTGKQLHALALKSGQIHDVFV--------GCSAFDM----YSK 57
++ CLF K S L P + L + L++G+I + G + + M Y+
Sbjct: 35 SYICLFGTKKLSILTTPPSNYLL-SFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYAD 93
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
G +DA K+F EMP ++L +WN+ + + G A + F + E +++++
Sbjct: 94 EGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKM----SERNVVSWTTI 149
Query: 118 LNACSDCSLLQLGR-QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+N LL+ GR ++ L R +V+ N +V + V A +F+ + ++N
Sbjct: 150 ING-----LLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRN 204
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+SW S++ N +F + ++ L+ACA I +G +H
Sbjct: 205 VISWTSVIGGLDHNGRSFEALVVF-HKMLASFKATSSTLACALTACANICTPFIGVQIHG 263
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
+ VK N ++ ++L+ Y C I +A FN RN+V W A++ GY
Sbjct: 264 LIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTD 323
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F+ M MR +PN +L L++C AV++G ++ +++ K G++
Sbjct: 324 ALQVFKGM--MRMSVLPNQSSLTSALNSCCGLEAVDRGREV-HAVAHKLGLESDIFVSNS 380
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC--RVYGKPELGRIAADNLFKLDP 414
+V + + G ++ + M + +S W +++ C +G+ L A ++DP
Sbjct: 381 LVVMYTKCGHINDGIAVFTRMSRKNVVS-WNSIIVGCAQHGFGRWALTLFAQMIRTRVDP 439
Query: 415 NDSGNHVLLSNMFAATGR 432
++ + L+ + +A G
Sbjct: 440 DE----ITLAGLLSACGH 453
>gi|413921338|gb|AFW61270.1| hypothetical protein ZEAMMB73_216321 [Zea mays]
Length = 687
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 325/575 (56%), Gaps = 20/575 (3%)
Query: 19 ASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT 78
A+ A H+ +G +L D++ MY + G+ +A + FD MP+RN T
Sbjct: 126 AAVAWHVESSGFEL-----------DLYTHNHVLRMYLECGMLAEARQAFDGMPDRNGVT 174
Query: 79 WNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
W + V GRP+ A+ F + GG+ + + A + + GRQLH +
Sbjct: 175 WGIMMGGLVDRGRPRAALALFREMWAEAGGDAPPRSLVVAVRAAASSGSARAGRQLHCCV 234
Query: 138 VRSGFDGNVS---VCNGLVDFYGKCNEVGLAKVVFDGIIDKND---VSWCSMLVVYVQNY 191
V++G G+V+ + L+D Y KC + A+ VFDG+ + V+W SML YV +
Sbjct: 235 VKAGACGDVADRYLTCALLDMYSKCGRIDEARRVFDGLPRPHRTTVVAWNSMLAAYVLHG 294
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
E +++ V F S++L +R+ LE + HA ++ + +I +
Sbjct: 295 HSEEALELYQKMCSTHVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNT 354
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA 311
ALVD+Y K G ++DA F +MP RNL+ WNA+I GY + G D A+ FE + + A
Sbjct: 355 ALVDLYCKWGRMEDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAE--GA 412
Query: 312 VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
VPN+VT + VL+AC +G V++G +IF MT IKP A HYACV++L GR GL+D +Y
Sbjct: 413 VPNHVTFLAVLNACRFSGLVDEGKRIFQLMTENLRIKPRAMHYACVIELFGREGLLDESY 472
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
+I+ P PT ++WGALL A R++ L + +A+ L ++P ++V+L N++ ++G
Sbjct: 473 SMIRRAPFTPTANMWGALLTASRIHKSMHLAKFSAEQLLAMEPEKINSYVVLLNLYVSSG 532
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
R + A V + +K G+ G CSWI+VK H F KDT H ++ EI L L +E++
Sbjct: 533 RQDSACKVVETLKRKGLYIGNACSWITVKKTDHRFFFKDTLHPQSAEIYRRLDTLMKEVR 592
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
AG++ + N L D+ +E+ +HSE++A+AFGLI+ P P+RI+++ R+C DCH+
Sbjct: 593 EAGFVAEENELLPDIHPDEQKISRAYHSERLAIAFGLISTAPQTPLRISQSHRLCSDCHN 652
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
KF+S + RE+IVRD +RFH F G CSC DYW
Sbjct: 653 LIKFVSRVTKREIIVRDGSRFHHFKLGVCSCGDYW 687
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++ + FTF + S L + KQ HA ++ G D+ + D+Y K G +DA
Sbjct: 311 VAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRMEDAR 370
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
+F+ MP RNL +WNA I+ G AI+ F L G P+ +TF A LNAC
Sbjct: 371 NVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAEGAVPNHVTFLAVLNACRFSG 430
Query: 126 LLQLGRQL---------------------------------HGFLVRSGFDGNVSVCNGL 152
L+ G+++ + + R+ F ++ L
Sbjct: 431 LVDEGKRIFQLMTENLRIKPRAMHYACVIELFGREGLLDESYSMIRRAPFTPTANMWGAL 490
Query: 153 VDFYGKCNEVGLAKVVFDGII---DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV 208
+ + LAK + ++ + S+ +L +YV + +++ C++ T +R+G+
Sbjct: 491 LTASRIHKSMHLAKFSAEQLLAMEPEKINSYVVLLNLYVSSGRQDSACKVVETLKRKGL 549
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 297/491 (60%), Gaps = 10/491 (2%)
Query: 102 LRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
+++ G PD I F A LNAC + L+LG+ +H ++ +G + N V LV+ YGK
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---PKDFMISS 217
+ A VF G+ K+ VSW +++ Y + Q+F G++ P +
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 218 VLSACARIAGLELGRSVHAVAVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+L ACA ++ GR H ++ C + +G +++MYGKCG+++ A F+ M E
Sbjct: 121 LLQACATLSAAAEGRLAHR-RIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSE 179
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R+ V W II GYAH GH++ +L F M + + P+ V+L+CVLS CS AG VE+G
Sbjct: 180 RDTVAWTTIISGYAHHGHSEESLLMFWRM--QQDGSKPDGVSLLCVLSVCSHAGLVEQGW 237
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F +T ++G++PG +HY C++DLLGR+G ++ A +I+ MP + T W L AC+V
Sbjct: 238 DFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKV 297
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ E G+ AA+ + +L+P + +V LSN++AA G W++ D VR MK +G++K G S
Sbjct: 298 HSDTERGKRAAEKVLELEPVPAA-YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRS 356
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
I V +R+H F A D SH R EI +L L +M+ +GY+PDT L +V EE+K +
Sbjct: 357 SIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLL 416
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+AFGL++ P G +RI KNLR+CGDCH+A KF+S I GRE+ +RD+ RFH F
Sbjct: 417 CFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHF 476
Query: 576 WDGYCSCSDYW 586
DG+CSC DYW
Sbjct: 477 QDGHCSCGDYW 487
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 10/352 (2%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M++E + P+ F A AL GK +H+ L++G + V + +MY K G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR---RTGGEPDLITFCA 116
D+A ++F + ++L +W A +S + A+ F + G +PD F
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN-GLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC+ S GR H + G+D + V G+++ YGKC + A VFDG+ ++
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +++ Y + E MF +++G +P + VLS C+ +E G
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240
Query: 236 AVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGH 293
K VE ++D+ G+ G ++ AE+ +MP + + W + A + H
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA--ACKVH 298
Query: 294 ADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+D + E VP YV+L + +A V++ +M L+
Sbjct: 299 SDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQ 350
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/596 (37%), Positives = 311/596 (52%), Gaps = 44/596 (7%)
Query: 30 KQLHALALKSG-----QIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
KQ+HA + G H FV A +++ T L D A+K+ + L T N+ I
Sbjct: 26 KQIHAQLVVKGILNNPHFHGQFVATIA--LHNTTNL-DYANKLLNHNNNPTLFTLNSMIR 82
Query: 85 NAVLGGRPKNAIDAFINLRRTGG---EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
P + + N+ + PD TF + C+ G +HG +++ G
Sbjct: 83 AYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHG 142
Query: 142 FDGNVSVCNGLVDFYG-------------------------------KCNEVGLAKVVFD 170
F+ + V GLV Y KC ++ A+ +FD
Sbjct: 143 FELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFD 202
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ +++ V+W +M+ Y Q +F + EGV+ + + VLSAC + L+
Sbjct: 203 EMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDH 262
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
GR VHA + V + +G+ALVDMY KCG++ A F M ERN+ W++ IGG A
Sbjct: 263 GRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAM 322
Query: 291 QGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G + +L F +M R PN +T + VL CS G VE+G K F SM YGI P
Sbjct: 323 NGFGEESLDLFNDMK--REGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQ 380
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHY +VD+ GRAG + A I MPMRP + W ALL+ACR+Y ELG IA +
Sbjct: 381 LEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIV 440
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+L+ + G +VLLSN++A WE +R+ MK G+KK GCS I V +H F D
Sbjct: 441 ELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGD 500
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH R EI+ L ++ + ++ +GY+ +TN L+D+EEEEK + HSEK+A+AFGLI+
Sbjct: 501 KSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLIS 560
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ VPIR+ NLRIC DCH+ K IS I RE+IVRD NRFH F DG CSC DYW
Sbjct: 561 LKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 151/319 (47%), Gaps = 45/319 (14%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG----------------------QIH 43
+SP+++TF L + + L VTG +H +K G H
Sbjct: 108 LSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCH 167
Query: 44 DVFVGCSAFDMYSKTGLK---------DDADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
+VF G D+ ++T + D A KMFDEMPER+ TWNA I+ GR +
Sbjct: 168 NVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSRE 227
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A+D F ++ G + + ++ L+AC+ +L GR +H ++ R V++ LVD
Sbjct: 228 ALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVD 287
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC V A VF G+ ++N +W S + N E +F +REGV+P
Sbjct: 288 MYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGIT 347
Query: 215 ISSVLSACARIAGLELGRSVHAVAVKACVEGNIF-VGSAL------VDMYGKCGSIQDAE 267
SVL C+ + +E GR H +++ N++ +G L VDMYG+ G +++A
Sbjct: 348 FISVLKGCSVVGLVEEGRK-HFDSMR-----NVYGIGPQLEHYGLMVDMYGRAGRLKEAL 401
Query: 268 IAFNKMPERNLV-CWNAII 285
N MP R V W+A++
Sbjct: 402 NFINSMPMRPHVGAWSALL 420
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + N+ + + A + L + G+ +HA + V +G + DMY+K G
Sbjct: 235 MQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGN 294
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M ERN+ TW++ I + G + ++D F +++R G +P+ ITF + L
Sbjct: 295 VDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKG 354
Query: 121 CSDCSLLQLGRQLHGFLVRS--GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CS L++ GR+ H +R+ G + +VD YG+ + A + + + V
Sbjct: 355 CSVVGLVEEGRK-HFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHV 413
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
S L+ + Y+ + ++ A+R+ VE +D
Sbjct: 414 GAWSALLHACRMYKNK---ELGEIAQRKIVELED 444
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/457 (42%), Positives = 281/457 (61%), Gaps = 4/457 (0%)
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
++H +V++ ++ + +V L+D Y K +V A VF GI DK+ V+W +ML Y Q
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARI-AGLELGRSVHAVAVKACVEGNIFVG 250
E E +MF + G++P +F SS+L+ CA A + G+ H A+K+ ++ ++ V
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
SAL+ MY K G+I+ AE F + E++LV WN++I GYA G A AL F+EM + +
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 197
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+ VT + V +AC+ AG VE+G K F M I P EH +C+VDL RAG +++A
Sbjct: 198 M--DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 255
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
++I+ MP ++W +L ACRV+ K ELGR+AA+ + + P DS +VLLSNM+A +
Sbjct: 256 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 315
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEM 490
G W+E VRK M + +KK G SWI VKN+ + F A D SH +I L L +
Sbjct: 316 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 375
Query: 491 KAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCH 550
K GY PDT++ L D+++E K + HSE++A+AFGLIA P G P+ I KNLR+CGDCH
Sbjct: 376 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCH 435
Query: 551 SAFKFISGIVGREVIVRDNNRFHRF-WDGYCSCSDYW 586
K I+ I RE++VRD+NRFH F DG CSC D+W
Sbjct: 436 LVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 11/314 (3%)
Query: 10 DFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
+FT+ + A +PV + ++HA +K+ VG + D Y K G ++A K+F
Sbjct: 1 EFTYSVILTA-----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 55
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNAC--SDCSL 126
+ ++++ W+A ++ G + AI F L + G +P+ TF + LN C ++ S+
Sbjct: 56 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 115
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
Q G+Q HGF ++S D ++ V + L+ Y K + A+ VF +K+ VSW SM+
Sbjct: 116 GQ-GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 174
Query: 187 YVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC-VEG 245
Y Q+ + +F ++ V+ V +AC +E G + V+ C +
Sbjct: 175 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 234
Query: 246 NIFVGSALVDMYGKCGSIQDAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEM 304
S +VD+Y + G ++ A MP W I+ ++ + E++
Sbjct: 235 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 294
Query: 305 TSMRCEAVPNYVTL 318
+M+ E YV L
Sbjct: 295 IAMKPEDSAAYVLL 308
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 37/275 (13%)
Query: 6 ISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDA 64
I PN+FTF + +A + + GKQ H A+KS + V + MY+K G + A
Sbjct: 94 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 153
Query: 65 DKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDC 124
+++F E++L +WN+ IS G+ A+D F +++ + D +TF AC+
Sbjct: 154 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 213
Query: 125 SLLQLGRQLHGFLVRSGFDGNVSVCNG-LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L++ G + +VR N +VD Y + ++ A V
Sbjct: 214 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV--------------- 258
Query: 184 LVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACV 243
++N G ++ T +L+AC ELGR + A + A
Sbjct: 259 ----IENMPNPAGSTIWRT---------------ILAACRVHKKTELGR-LAAEKIIAMK 298
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
+ L +MY + G Q+ M ERN+
Sbjct: 299 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 333
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/595 (38%), Positives = 311/595 (52%), Gaps = 27/595 (4%)
Query: 14 PCLFKASSAL---------HIP----VTGKQLHALALKSGQ----IHDVFVGCSAFDMYS 56
PC A++AL H+ T KQLHA AL++ H + F + +
Sbjct: 9 PCTHPAAAALRHCVALLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAKHLLFHLAA 68
Query: 57 KTG--LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
L+ + +P + + N + RP+ A+ RR PD T+
Sbjct: 69 LKAPPLRYAVAVLSGLLPSPDPFSLNTVLRIFASSARPRVALALH---RRHLAPPDTHTY 125
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII- 173
L AC+ L+ G LH ++G V V N LV YG C A VFD I
Sbjct: 126 PPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPP 185
Query: 174 -DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
++N VSW S+L + N +F P F + SVL+ACA I L LGR
Sbjct: 186 PERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGR 245
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNLVCWNAIIGGYAHQ 291
VH K + GN G+AL+D+Y KCG + DA F +M R +V W ++I G A
Sbjct: 246 RVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVN 305
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G AL F M R + +P +T+V VL ACS G V+ G + F M +YGI P
Sbjct: 306 GFGMDALQLFSMME--REKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRI 363
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EH C+VDLLGRAG V+ A+ I MP+ P VW LL AC ++ K E+G A L +
Sbjct: 364 EHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVE 423
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP SG++VLLSN++A GRW + ++RK M G++K G S + ++N ++ F D
Sbjct: 424 LDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDR 483
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH +I ML + E ++ GYIP T+ L D+E+EEK + + +HSE++A+AF L+
Sbjct: 484 SHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKS 543
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG PIRI KNLR+CGDCH A K IS + RE+IVRD +RFH F G CSC DYW
Sbjct: 544 LPGTPIRIVKNLRVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 9/357 (2%)
Query: 2 RRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLK 61
RR P+ T+P L +A + L G+ LHA A K+G + VFV S +Y GL
Sbjct: 114 RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLF 173
Query: 62 DDADKMFDEM--PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ A ++FDE+ PERNL +WN+ ++ GRP + F + PD T + L
Sbjct: 174 ESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLT 233
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
AC++ +L LGR++H F+ + G GN N L+D Y KC V A+ +F + + + V
Sbjct: 234 ACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVV 293
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAV 237
SW S++V N + Q+F RE + P + + VL AC+ ++ G R +
Sbjct: 294 SWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQM 353
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + I +VD+ G+ G +++A MP E N V W ++G A ++
Sbjct: 354 KAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEI 413
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+++ + + +YV L + + R V + + +G++ H
Sbjct: 414 GEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVH----VLRKTMVTHGVRKNPGH 466
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 328/589 (55%), Gaps = 17/589 (2%)
Query: 6 ISPNDFTFPCLFKA-SSALHIPVTG-KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
I P+ TF +FKA SS+ + + K H ++G DV V + + Y++ G D
Sbjct: 226 IPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A + F MPERN +W + I+ G A++ F + G P T A L C D
Sbjct: 286 AREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCED 344
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW--- 180
L R + G +V++ LV Y +C+ A VF + + W
Sbjct: 345 ---LHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAA 398
Query: 181 --CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA-V 237
+M+ VY Q + + +++ A G+ P + + L ACA +A L GR +HA V
Sbjct: 399 LVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACV 458
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
A ++ ++ +G+A+V MYG+CGS++DA AF+ MP R+ + WNA++ A G +
Sbjct: 459 AADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDC 518
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACV 357
F M +A V + +LSAC+ AG VE G + F +MT +G+ P EHY C+
Sbjct: 519 CDLFRAMLQEGFDA--ERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCM 576
Query: 358 VDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDS 417
VDLLGR G + A+ I++ MP+ P + W AL+ ACR+YG E GR AA+ + +L N +
Sbjct: 577 VDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHT 636
Query: 418 GNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT 477
+V L N+++A GRWE+A VRK M D+G++K G S I +++++H F +D SH ++
Sbjct: 637 AAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSE 696
Query: 478 EIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPI 537
I A L ++ ++ AGY T L+DVEEE+K + HSEK+A+AFG+++ P G +
Sbjct: 697 AIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTL 756
Query: 538 RITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
R+ KNLR+C DCH+A KFIS + GRE++VRD RFH F DG CSC DYW
Sbjct: 757 RVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 180/409 (44%), Gaps = 24/409 (5%)
Query: 3 RECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+E I+ + F + A S+ G+ +H A+++G V + MY + G
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 63 DADKMFDEMPERNL--ATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA+ +F + ER+L WNA I+ G P+ A++ F + + G PDL+TF + A
Sbjct: 181 DANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 121 CSDCSLLQLGRQLHGF---LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
CS L+ Q+ GF L +G +V V LV+ Y +C E+ A+ F + ++N
Sbjct: 240 CSSSPSLR-ASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNA 298
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW SM+ + Q + F EGV P + + L C L R V A+
Sbjct: 299 VSWTSMIAAFAQ-IGHLLAVETFHAMLLEGVVPTRSTLFAALEGC---EDLHTARLVEAI 354
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER--NLVCWNAIIGGYAH----Q 291
A + V ++ + + LV Y +C +DA F+ E + A+I YA +
Sbjct: 355 AQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRR 414
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ ++ E S P+ + + L AC+ A+ +G +I + +
Sbjct: 415 STFKLWGAAIERGIS------PDRILYITALDACASLAALSEGRQIHACVAADRRLDRDV 468
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+V + G+ G + A + MP R IS W A+L+A +G+ E
Sbjct: 469 TLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 131/302 (43%), Gaps = 9/302 (2%)
Query: 29 GKQLHALALKSGQI-HDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
GK LH+ S + D ++ S MY + G + A +F ++ +++ W IS V
Sbjct: 45 GKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYV 104
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G AI F + + G D I F + L+ACS L GR +H V +G
Sbjct: 105 SRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEI 164
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS-WCSMLVVYVQNYEEENGCQMFLTARRE 206
V + LV YG+C + A +F + DV W +M+ QN ++F +
Sbjct: 165 VASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQL 224
Query: 207 GVEPKDFMISSVLSACARIAGLELG--RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G+ P SV AC+ L + H + + ++ V +ALV+ Y +CG I
Sbjct: 225 GIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEID 284
Query: 265 DAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEA-VPNYVTLVCVLS 323
A F MPERN V W ++I +A GH L + E +M E VP TL L
Sbjct: 285 CAREFFAAMPERNAVSWTSMIAAFAQIGH----LLAVETFHAMLLEGVVPTRSTLFAALE 340
Query: 324 AC 325
C
Sbjct: 341 GC 342
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 20/294 (6%)
Query: 110 DLITF--CAFLNACSDCSLLQLGRQLHGFLV------RSGFDGNVSVCNGLVDFYGKCNE 161
DL +F A + +C+ + G+ LH + R G+ + + LV Y +C
Sbjct: 23 DLSSFDSAAAVRLVRECNSIARGKLLHSKISSSQSLSRDGY-----LASSLVYMYLRCGS 77
Query: 162 VGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSA 221
+ A VF I K+ V W ++ YV +F +EG+ + SVLSA
Sbjct: 78 LESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSA 137
Query: 222 CARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL--V 279
C+ L GR +H AV+A + V SALV MYG+CGS++DA F + ER+L V
Sbjct: 138 CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVV 196
Query: 280 CWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKG-MKIF 338
WNA+I + G AL F M + P+ VT V V ACS + ++ +K F
Sbjct: 197 LWNAMITANSQNGSPREALEIFYRMLQLGIP--PDLVTFVSVFKACSSSPSLRASQVKGF 254
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
++ + G+ +V+ R G +D A E MP R +S W +++ A
Sbjct: 255 HTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVS-WTSMIAA 307
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 303/533 (56%), Gaps = 5/533 (0%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y + G DDA K+F +MP +N+ +W I R A+D F N+ R + F
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 115 CAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIID 174
+ AC++ +G Q+HG +++ GF V L+ FY C +G ++ VFD +
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
+ W ++L Y N + E+ +F R + P +S L++C+ + L+ G+ +
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H VAVK +E + FVG++LV MY G++ DA F K+ ++++V WN+II G A G
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG-IKPGAEH 353
A F +M +R P+ +T +LSACS G +EKG K+FY M+ I +H
Sbjct: 409 KWAFVIFGQM--IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQH 466
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y C+VD+LGR G + A E+I+ M ++P VW ALL+ACR++ + G AA +F LD
Sbjct: 467 YTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLD 526
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
S +VLLSN++A+ GRW +R +MK GI K G SW+ ++ + H F + D H
Sbjct: 527 SKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPP 533
+ I L LRE++K GY PD AL+DVE+E+K + +HSE++A+AFGLI
Sbjct: 587 --CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVE 644
Query: 534 GVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G + + KNLR+C DCH+ K ISG+VGRE+++RD RFH F +G CSC DYW
Sbjct: 645 GSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 9/339 (2%)
Query: 1 MRRECISPNDFTFPCLFKA---SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSK 57
M R CI F C+ A + A H+ G Q+H L +K G +++ +V S Y+
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHM---GIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAF 117
D+ K+FDE +A W A +S L + ++A+ F + R P+ TF +
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
LN+CS L G+++HG V+ G + + V N LV Y V A VF I K+
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
VSW S++V Q+ + +F R EP + + +LSAC+ LE GR +
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 238 AVKAC--VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHA 294
++ I + +VD+ G+CG +++AE +M + N + W A++
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDV 512
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
D + + ++ ++ YV L + ++ R V K
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSK 551
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 170/376 (45%), Gaps = 16/376 (4%)
Query: 55 YSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITF 114
Y+++ DA +FDEMP R++ +WN+ IS V G A+ F + E ++++
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PERSVVSW 131
Query: 115 CAFLNACSDCSLL-QLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGII 173
A +N C + Q R + V+ + + N +V Y + +V A +F +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
KN +SW +M+ QN +F R ++ + V++ACA +G
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
VH + +K +V ++L+ Y C I D+ F++ + W A++ GY+
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
+ ALS F M +R +PN T L++CS G ++ G K + + +K G++ A
Sbjct: 307 HEDALSIFSGM--LRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFV 363
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
+V + +G V+ A + ++ + +I W +++ C +G+ + + + +L
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL- 421
Query: 414 PNDSGNHVLLSNMFAA 429
N + + + + +A
Sbjct: 422 -NKEPDEITFTGLLSA 436
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+VS+ ++ Y + N + A +FD + ++ VSW SM+ V+ + ++F
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF---- 120
Query: 205 REGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
E E +++++ C R ++ R + + VK N ++V Y + G +
Sbjct: 121 DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKV 175
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
DA F +MP +N++ W +I G + AL F+ M +RC CV++
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM--LRCCIKSTSRPFTCVIT 233
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
AC+ A A G+++ + + +K G A ++ + + ++ E + +
Sbjct: 234 ACANAPAFHMGIQV-HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQV 291
Query: 384 SVWGALLNACRVYGKPE 400
+VW ALL+ + K E
Sbjct: 292 AVWTALLSGYSLNKKHE 308
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 263 IQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVL 322
I +A FN++P ++ + +I GY AL+ F+EM V + V+ ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMI 104
Query: 323 SACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPT 382
S C G + +K+F M + + A C R+G VD+A + +MP++ T
Sbjct: 105 SGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF-----RSGKVDQAERLFYQMPVKDT 159
Query: 383 ISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVL 422
+ W ++ V+G + G++ D+ KL G +V+
Sbjct: 160 -AAWNSM-----VHGYLQFGKV--DDALKLFKQMPGKNVI 191
>gi|115453917|ref|NP_001050559.1| Os03g0582100 [Oryza sativa Japonica Group]
gi|113549030|dbj|BAF12473.1| Os03g0582100 [Oryza sativa Japonica Group]
Length = 629
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 318/591 (53%), Gaps = 35/591 (5%)
Query: 8 PNDFTFPCLFKASSALHIPVT-------GKQLHALALKSGQI---HDVFVGCSAFDMYSK 57
P F L KA+S+ P G QLHA A+ G + + + Y+
Sbjct: 62 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121
Query: 58 TGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE--PDLITFC 115
D A K+FD MP RN TWNA I GR + AI F +++R G PD TF
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181
Query: 116 AFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDK 175
A L+ +GR+ G G LV Y + AKV FD +
Sbjct: 182 ALLSG--------IGRE--------GGSGRT-----LVSLYAARRTLEDAKVAFDQVGSS 220
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ + W SM+ YV EEE +F + ++P F+ S+V S C R+ LE+G+ VH
Sbjct: 221 DPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVH 280
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A ++K+ E + + +AL+ MY CG I DA+ F+ N++ +N++I G+
Sbjct: 281 AHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPK 340
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL F +M +P+ VTL+ ++S+ + AG V +G+++F SM GIKP +HYA
Sbjct: 341 EALEHFRQMKF--AGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYA 398
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
CVVD+L R+G + +A + I EMP +W +L AC + E G+ A+ LF+++P
Sbjct: 399 CVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPY 458
Query: 416 DSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHER 475
++ N++LL N++A GRW EA+ VR M + G+ K SWI + R + F D SH
Sbjct: 459 EATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPI 518
Query: 476 NTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGV 535
+ EI L +L +K AGY+PD +FA ++++ + K + +H EK+A AFG +A P G
Sbjct: 519 SREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGG 578
Query: 536 PIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+RI KNLR+CGDCH A+K+ S + GRE+I+RDN RFH F G+CSC DYW
Sbjct: 579 TLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 629
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
I P F + +F + I GKQ+HA +LKS D + + MYS G +DA
Sbjct: 253 IKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQ 312
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
K+F N+ ++N+ IS G PK A++ F ++ G PD +T +++ +
Sbjct: 313 KVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAG 372
Query: 126 LLQLGRQLHGFLVR-SGFDGNVSVCNGLVDFYGKCNEVGLA 165
L+ G Q+ +V G +VD + E+G A
Sbjct: 373 LVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKA 413
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 314/594 (52%), Gaps = 41/594 (6%)
Query: 30 KQLHALALKSGQIHDV-----FVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
KQ+HA LK+G I D F+ C + + A +FD + WN I
Sbjct: 60 KQIHARMLKTGLIQDSYAITKFLSCCISS--TSSDFLPYAQIVFDGFDRPDTFLWNLMIR 117
Query: 85 NAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P+ ++ + + + TF + L ACS+ S L+ Q+H + + G++
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGI-------------------------------I 173
+V N L++ Y LA ++FD I +
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 174 DKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS 233
+KN +SW +M+ YVQ + Q+F + VEP + +++ LSACA++ LE G+
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGH 293
+H+ K + + +G L+DMY KCG + +A F + +++ W A+I GYA+ GH
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGH 357
Query: 294 ADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEH 353
A+S F EM M + PN +T VL+ACS G VE+G IFY+M Y +KP EH
Sbjct: 358 GREAISKFMEMQKMGIK--PNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEH 415
Query: 354 YACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLD 413
Y CVVDLL RAGL+D A I+EMP++P +WGALL ACR++ ELG + L +D
Sbjct: 416 YGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 475
Query: 414 PNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSH 473
P G +V +N+ A +W++A R+ MK+ G+ K GCS IS++ H F A D SH
Sbjct: 476 PYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 535
Query: 474 ERNTEIQAMLTKLREEMKAAGYIPD-TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
+IQ+ +R +++ GY+P+ + L V+++E+ T V HSEK+A+ +GLI
Sbjct: 536 PEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTK 595
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG IRI KNLR+C DCH K IS I R++++RD RFH F DG CSC DYW
Sbjct: 596 PGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 34/315 (10%)
Query: 5 CISP-NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
C +P N +TFP L KA S L Q+HA K G +DV+ S + Y+ TG
Sbjct: 138 CSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKL 197
Query: 64 ADKMFDEMP-------------------------------ERNLATWNAYISNAVLGGRP 92
A +FD +P E+N +W IS V G
Sbjct: 198 AHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMH 257
Query: 93 KNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGL 152
K A+ F ++ + EPD ++ L+AC+ L+ G+ +H +L ++ + + L
Sbjct: 258 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVL 317
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+D Y KC ++G A VF I K+ +W +++ Y + F+ ++ G++P
Sbjct: 318 IDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 377
Query: 213 FMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFN 271
++VL+AC+ +E G+ + + + ++ I +VD+ + G + +A+
Sbjct: 378 ITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQ 437
Query: 272 KMPER-NLVCWNAII 285
+MP + N V W A++
Sbjct: 438 EMPLKPNAVIWGALL 452
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ + P++ + A + L GK +H+ K+ D +GC DMY+K G
Sbjct: 267 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGD 326
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A ++F + +++ W A IS G + AI F+ +++ G +P++ITF L A
Sbjct: 327 MGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTA 386
Query: 121 CSDCSLLQLGRQLHGFLVRS-GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDV 178
CS L++ G+ + + R + +VD + + AK + + N V
Sbjct: 387 CSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAV 446
Query: 179 SWCSML 184
W ++L
Sbjct: 447 IWGALL 452
>gi|115438899|ref|NP_001043729.1| Os01g0651100 [Oryza sativa Japonica Group]
gi|113533260|dbj|BAF05643.1| Os01g0651100, partial [Oryza sativa Japonica Group]
Length = 503
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 294/501 (58%), Gaps = 7/501 (1%)
Query: 90 GRPKNAIDAFINLRRTG---GEPDLITFCAFLNACSDCSLLQLG-RQLHGFLVRSGFDGN 145
G P A DAF + G + ++ + + A D S L LHG ++ F G+
Sbjct: 6 GLPAAAFDAFRRMLAAGVPATDRNIPSAAKAVAAAEDSSRPPLAPHALHGLSAKTPFAGD 65
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
V V + ++D Y KC + A+ +FD + +N VSW +++ Y ++F A
Sbjct: 66 VFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYADAGMHSAAMEIFRLALE 125
Query: 206 EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQD 265
E V DF +S +L CA ELG VHA ++K + + FVGS+LV +Y KCG ++
Sbjct: 126 EAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVEC 185
Query: 266 AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSAC 325
A F + PERNL WNA + A GH A F +M + PN +T + +++AC
Sbjct: 186 AYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFR--PNSITFLSLITAC 243
Query: 326 SRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV 385
S AG V++G K ++S+ +Y I+P AEHYA +VDLLGR G + A +I+ MPM P V
Sbjct: 244 SHAGLVDEG-KRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYV 302
Query: 386 WGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKD 445
WGALL ACR++ + IAA LF+ SG H+LLS+ +AA GR +A L RK M+D
Sbjct: 303 WGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHMDAALARKAMRD 362
Query: 446 VGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYD 505
G++K G SW+ +H F + H R+ EI +L K+ E+M+AAGY+ DT+ + D
Sbjct: 363 AGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMEAAGYVADTSAVVKD 422
Query: 506 VEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVI 565
V+++EK + +HSE++A+ GL+ +P GVPIR+ KNLR+C DCH+A K++S GR VI
Sbjct: 423 VDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAVKYLSKCTGRIVI 482
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RDN RFHRF DG CSC D+W
Sbjct: 483 LRDNRRFHRFEDGVCSCGDFW 503
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 3/262 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P+ LH L+ K+ DVFVG S DMY+K G DA ++FDEMP+RN+ +W+A I
Sbjct: 47 PLAPHALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICG 106
Query: 86 AVLGGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G A++ F + L D C L C+ +L +LG Q+H +++ +
Sbjct: 107 YADAGMHSAAMEIFRLALEEAVPVNDFTVSC-ILRVCAAATLFELGAQVHARSIKTALNA 165
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ V + LV Y KC V A VF ++N W + L Q+ Q F+ +
Sbjct: 166 SPFVGSSLVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQ 225
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P S+++AC+ ++ G+ ++ + +E +A+VD+ G+ G I
Sbjct: 226 NAGFRPNSITFLSLITACSHAGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRIS 285
Query: 265 DAEIAFNKMP-ERNLVCWNAII 285
+A MP E W A++
Sbjct: 286 EALGLIESMPMEPPEYVWGALL 307
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT C+ + +A + G Q+HA ++K+ FVG S +YSK GL +
Sbjct: 126 EAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVEC 185
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F E PERNL WNA ++ + G A F++++ G P+ ITF + + ACS
Sbjct: 186 AYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITFLSLITACSH 245
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + + +VD G+ + A + + + ++ + W +
Sbjct: 246 AGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGA 305
Query: 183 MLVVYVQNYEEENGCQMF 200
+L+ C+MF
Sbjct: 306 LLM----------ACRMF 313
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 297/491 (60%), Gaps = 10/491 (2%)
Query: 102 LRRTGGEPDLITFCAFLNACSDC-SLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCN 160
+++ G PD I F A LNAC + L+LG+ +H ++ +G + N V LV+ YGK
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE---PKDFMISS 217
+ A VF G+ K+ VSW +++ Y + Q+F G++ P +
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 218 VLSACARIAGLELGRSVHAVAVKACV--EGNIFVGSALVDMYGKCGSIQDAEIAFNKMPE 275
+L ACA ++ GR H ++ C + +G +++MYGKCG+++ A F+ M E
Sbjct: 121 LLQACATLSAAAEGRLAHR-RIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSE 179
Query: 276 RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGM 335
R+ V W II GYAH GH++ +L F M + + P+ V+L+CVLS CS AG VE+G
Sbjct: 180 RDTVAWTTIISGYAHHGHSEESLLMFWRM--QQDGSKPDGVSLLCVLSVCSHAGLVEQGW 237
Query: 336 KIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRV 395
F +T ++G++PG +HY C++DLLGR+G ++ A +I+ MP + T W L AC+V
Sbjct: 238 DFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKV 297
Query: 396 YGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCS 455
+ E G+ AA+ + +L+P + +V LSN++AA G W++ D VR MK +G++K G S
Sbjct: 298 HSDTERGKRAAEKVLELEPVPAA-YVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRS 356
Query: 456 WISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEV 515
I V +R+H F A D SH R EI +L L +M+ +GY+PDT L +V EE+K +
Sbjct: 357 SIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLL 416
Query: 516 GHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRF 575
HSEK+A+AFGL++ P G +RI KNLR+CGDCH+A KF+S I GRE+ +RD+ RFH F
Sbjct: 417 CFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHF 476
Query: 576 WDGYCSCSDYW 586
DG+CSC DYW
Sbjct: 477 QDGHCSCGDYW 487
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 10/352 (2%)
Query: 1 MRRECISPNDFTFPCLFKA-SSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M++E + P+ F A AL GK +H+ L++G + V + +MY K G
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLR---RTGGEPDLITFCA 116
D+A ++F + ++L +W A +S + A+ F + G +PD F
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN-GLVDFYGKCNEVGLAKVVFDGIIDK 175
L AC+ S GR H + G+D + V G+++ YGKC + A VFDG+ ++
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
+ V+W +++ Y + E MF +++G +P + VLS C+ +E G
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240
Query: 236 AVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGH 293
K VE ++D+ G+ G ++ AE+ +MP + + W + A + H
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA--ACKVH 298
Query: 294 ADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+D + E VP YV+L + +A V++ +M L+
Sbjct: 299 SDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQ 350
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 319/563 (56%), Gaps = 12/563 (2%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD-----KMFDEMPERNLATWNAYISN 85
Q+HA +++ I + F+ + S+ L D ++F ++ + + + +N I
Sbjct: 86 QIHAHIIRTSLIQNHFI---SLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRA 142
Query: 86 AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
+ P+ + +RR G P+ ++ + +C S L G Q+H ++R G +
Sbjct: 143 YSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSD 202
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF--LTA 203
+ L+D Y C++ A VFD I + VSW ++ + N + +MF + +
Sbjct: 203 NLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQS 262
Query: 204 RREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSI 263
+G EP D +L ACA + LE G VH + +G + + ++L+ MY +CG +
Sbjct: 263 TADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRL 322
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
+ A F +M ERN+V W+A+I G+A G+ A+ +FE+M + P+ TL VLS
Sbjct: 323 EKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVS--PDDQTLTGVLS 380
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS G V+ G+ F M+ +GI+P HY C+VDLLGRAGL+D+AY++I M ++P
Sbjct: 381 ACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDS 440
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
++W LL ACR++ LG +L +L ++G++VLL N++++ G W++ +RK M
Sbjct: 441 TLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFM 500
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFAL 503
K+ GI+ GCS I +K ++H F D H R EI ML ++ +++K AGY+ + + L
Sbjct: 501 KEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSEL 560
Query: 504 YDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGRE 563
+++ EEK + +HSEK+A+AFG++A PPG IR+ KNLRIC DCH+ K +SG RE
Sbjct: 561 HNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNRE 620
Query: 564 VIVRDNNRFHRFWDGYCSCSDYW 586
V++RD RFH F +G CSC+ YW
Sbjct: 621 VVIRDRTRFHHFREGQCSCNGYW 643
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 192/407 (47%), Gaps = 22/407 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MRR + PN + + K+ + + G Q+HA L+ G D + + D+YS
Sbjct: 159 MRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDK 218
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRT--GGEPDLITFCAFL 118
++A K+FDE+P+ + +WN IS + R ++A+ F ++ T G EPD +T L
Sbjct: 219 FEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLL 278
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
AC++ L+ G ++H ++ G+DG +++CN L+ Y +C + A +F + ++N V
Sbjct: 279 QACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVV 338
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVA 238
SW +M+ + + + F ++ GV P D ++ VLSAC+ ++ G
Sbjct: 339 SWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRM 398
Query: 239 VKAC-VEGNIFVGSALVDMYGKCGSIQDA-EIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
K +E NI +VD+ G+ G + A ++ + + + + W ++G HA +
Sbjct: 399 SKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATL 458
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACS--------RAGAVEKGMKIF---YSMTLKY 345
+ ++ + +YV L+ + S+ R EKG++ ++ LK
Sbjct: 459 GERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELK- 517
Query: 346 GIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G H V D+L D YE++ E+ + I+ + A L++
Sbjct: 518 ----GKVHEFVVDDILHPR--TDEIYEMLDEIGKQLKIAGYVAELSS 558
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 314/594 (52%), Gaps = 35/594 (5%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P + ++ HA +K G Y+K+ L D +FDE P R+L +++ ++
Sbjct: 19 PRSLRRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAA 78
Query: 86 AVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
P+ + + PD + +A + L LG+QLHG V S +
Sbjct: 79 VSHSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSS 138
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY------------- 191
+ V + L+D Y KC A+ VFD I+ KN V W +++ YV N
Sbjct: 139 DDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMP 198
Query: 192 ------------------EEENGCQMFLTARREGVEPKD-FMISSVLSACARIAGLELGR 232
E + ++F+ RR+GV D F++SS + A +A LGR
Sbjct: 199 GRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGR 258
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H++ ++ ++ VG+A+VDMY KC I A F ++ R+++ W ++ G A G
Sbjct: 259 QLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHG 318
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A+ A S ++ M + PN VT V ++ ACS AG V+KG ++F SM +YGI P +
Sbjct: 319 RAEEAFSLYDRMVLAGVK--PNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQ 376
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C +DLL R+G + A E+I MP P + W +LL+AC+ Y E+ ADNL +L
Sbjct: 377 HYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLEL 436
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
P +VLLSN++A G+W+ D VRK M D+ I+K G SWI V +F A +
Sbjct: 437 RPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVP 496
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
+ EI L +L EM+ GY+PDT+ ++D+EE EK + HSE++A+AFG++ P
Sbjct: 497 IDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSP 556
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
G IR+ KNLR+C DCH+ KFIS I R++IVRD +RFH F G CSCS++W
Sbjct: 557 LGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 167/381 (43%), Gaps = 36/381 (9%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
+ + P+ F + A++ L GKQLH + S D V S DMY K G+ DD
Sbjct: 99 DALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDD 158
Query: 64 ADKMFD-------------------------------EMPERNLATWNAYISNAVLGGRP 92
A K+FD MP R L W A IS V G
Sbjct: 159 ARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGES 218
Query: 93 KNAIDAFINLRRTGGE-PDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNG 151
+A+ F+++RR G D + + +D + LGRQLH +R GF ++ V N
Sbjct: 219 VSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNA 278
Query: 152 LVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPK 211
+VD Y KC+++ A+ VF+ I ++ +SW +MLV Q+ E ++ GV+P
Sbjct: 279 VVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPN 338
Query: 212 DFMISSVLSACARIAGLELGRSV-HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
+ ++ AC+ ++ GR + ++ + + + + +D+ + G + +AE
Sbjct: 339 EVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELI 398
Query: 271 NKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAG 329
MP + W +++ +A+M++ + + +R + YV L V + +
Sbjct: 399 TTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWD 458
Query: 330 AVEKGMKIFYSMTLKYGIKPG 350
+V+ K+ M ++ +PG
Sbjct: 459 SVDTVRKLMADMEIRK--EPG 477
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 1 MRRECISPND-FTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MRR+ +S +D F ++ L V G+QLH+L ++ G + VG + DMYSK
Sbjct: 228 MRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCS 287
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A ++F+E+ R++ +W + GR + A + + G +P+ +TF +
Sbjct: 288 DIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIY 347
Query: 120 ACSDCSLLQLGRQL 133
ACS L+Q GRQL
Sbjct: 348 ACSHAGLVQKGRQL 361
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 317/564 (56%), Gaps = 9/564 (1%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
KQ HAL L++ +H+ +F S +G + A K+F +M + N I
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P A+ + + G D T+ L AC+ ++LGR+ H ++++GF ++
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF-LTARRE 206
V N L+ FY C G A VFD ++ V+W M+ ++ E + + +
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 207 GVEPKDFMISSVLSACARIAGLELGRSVHAVAV---KACVEGNIFVGSALVDMYGKCGSI 263
+ P + + S++ ACA++ LE G+ +H+ + K + ++ + +ALVDMY KCGSI
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSI 267
Query: 264 QDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLS 323
A F +M RN+ WNA+IGG A GH + A+S F++M + +P+ VT + +L
Sbjct: 268 DLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDK--LMPDDVTFIALLC 325
Query: 324 ACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTI 383
ACS AG V++G+ +F +M K+ I+P EHY CVVDLL RA VD A I+ MP++
Sbjct: 326 ACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANS 385
Query: 384 SVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+W LL ACR G +L + +L+P+ G +V+LSN++A +W+ A +RK+M
Sbjct: 386 VLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 445
Query: 444 KDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA-AGYIPDTNFA 502
K+ GI+K GCSWI + IH F A D SH + +I AM+ ++ + G++P T
Sbjct: 446 KNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANV 505
Query: 503 LYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGR 562
L+D+EEEEK + HSEK+A+A GLI+ P G PIRI KNLR+C DCHS K S + R
Sbjct: 506 LFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNR 565
Query: 563 EVIVRDNNRFHRFWDGYCSCSDYW 586
E++ RD +RFH F +G CSC D+W
Sbjct: 566 EIVARDRSRFHHFKEGSCSCMDFW 589
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 9/340 (2%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ +++T+P + A + L G++ H LK+G D+FV + Y G A
Sbjct: 107 VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCAC 166
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDC 124
+FDE R++ TWN I+ + G + A D + + PD +T + + AC+
Sbjct: 167 DVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQL 226
Query: 125 SLLQLGRQLHGF---LVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
L+ G+ LH + L + + ++ + LVD Y KC + LA VF + +N +W
Sbjct: 227 GNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN 286
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVK 240
+++ + E+ +F + + P D ++L AC+ ++ G ++ A+ K
Sbjct: 287 ALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNK 346
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALS 299
+E + +VD+ + + DA MP + N V W ++G GH D+A
Sbjct: 347 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 406
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSR---AGAVEKGMK 336
+ + ++ YV L + + S+ A + K MK
Sbjct: 407 IGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 446
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 325/585 (55%), Gaps = 6/585 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKS---GQIHDVFVGCSAFDMYSKTGLKD 62
+ PN T L + G +HA L++ V +G + DMY+K
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
A ++F MP RN TW+A I VL R A + F ++ G + + L C
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC 317
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ + L +G QLH + +SG +++ N L+ Y K + A + FD I K+ +S+
Sbjct: 318 ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYG 377
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++L VQN + E +F + +EP + S++ AC+ +A L+ G+ H +
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + ++L+DMY KCG I + F+KMP R++V WN +I GY G A + F
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M + P+ VT +C+++ACS +G V +G F +MT KYGI P EHY C+VDLL
Sbjct: 498 LGMKNQGF--APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL 555
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
R GL+D AY+ I+ MP++ + VWGALL ACR++ +LG+ + + KL P +GN V
Sbjct: 556 ARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFV 615
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN+F+A GR++EA VR K G KK G SWI + +H F D SH + +I
Sbjct: 616 LLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYH 675
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L + ++K GY DT+F L D+EEEEK + +HSEK+A+AFG++++ I +TK
Sbjct: 676 ELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTK 735
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+CGDCH+A K+++ + R +IVRD NRFH F +G CSC ++W
Sbjct: 736 NLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 200/402 (49%), Gaps = 9/402 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN +TFP + KA SAL G+ +HA A +G D+FV + D+Y +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
A +F +MP R++ WNA ++ G +AI ++++ GG P+ T + L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGN---VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+ L G +H + +R+ + N V + L+D Y KC ++ A VF G+ +N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVH 235
DV+W +++ +V +F EG+ ++S L CA +A L +G +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A+ K+ + ++ ++L+ MY K G I +A + F+++ ++ + + A++ G G A+
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A F++M + C P+ T+V ++ ACS A++ G K + + G+
Sbjct: 391 EAFLVFKKMQA--CNMEPDIATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICN 447
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ + G +D + ++ +MP R +S W ++ ++G
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVS-WNTMIAGYGIHG 488
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 23/349 (6%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD +P + +NA I G AID + ++ R P+ TF L ACS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GR +H +G ++ V L+D Y +C G A+ VF + ++ V+W +M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 184 LVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
L Y + + L + G+ P + S+L A+ L G S+HA ++AC
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 243 VEGN---IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+E N + +G+AL+DMY KC + A F+ MP RN V W+A+IGG+ A +
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFN 292
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI--------FYSMTLKYGIKPGA 351
F++M V +C LSA S A A+ + +++ K GI
Sbjct: 293 LFKDM----------LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + +AGL++ A E+ ++ TIS +GALL+ C GK E
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAE 390
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 12/236 (5%)
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
++ LA+ VFD I + ++ +++ Y ++ + R V P + VL
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
AC+ + L GR++HA A A + ++FV +AL+D+Y +C A F KMP R++V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVA 168
Query: 281 WNAIIGGYAHQG---HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
WNA++ GYA+ G HA L ++ +R PN TLV +L ++ GA+ +G I
Sbjct: 169 WNAMLAGYANHGMYHHAIAHLLDMQDHGGLR----PNASTLVSLLPLLAQHGALFQGTSI 224
Query: 338 FYSMTLKYGIKPGAEHY---ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ L+ ++ E ++D+ + + A + MP+R ++ W AL+
Sbjct: 225 -HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-WSALI 278
>gi|218188763|gb|EEC71190.1| hypothetical protein OsI_03082 [Oryza sativa Indica Group]
Length = 486
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 278/454 (61%), Gaps = 3/454 (0%)
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LHG ++ F G+V V + ++D Y KC + A+ +FD + ++N VSW +++ Y
Sbjct: 36 LHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGM 95
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
++F A E V DF +S +L CA ELG VHA ++K + + FVGS+
Sbjct: 96 HSAAMEIFRLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSS 155
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
LV +Y KCG ++ A F + PERNL WNA + A GH A F +M +
Sbjct: 156 LVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFR-- 213
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN +T + +++ACS AG V++G K ++S+ +Y I+P AEHYA +VDLLGR G + A
Sbjct: 214 PNSITFLSLITACSHAGLVDEG-KRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALG 272
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
+I+ MPM P VWGALL ACR++ + IAA LF+ SG H+LLS+ +AA GR
Sbjct: 273 LIESMPMEPPEYVWGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAAAGR 332
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
+A L RK M+D G++K G SW+ +H F + H R+ EI +L K+ E+M+A
Sbjct: 333 HMDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMEA 392
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
AGY+ DT+ + DV+++EK + +HSE++A+ GL+ +P GVPIR+ KNLR+C DCH+A
Sbjct: 393 AGYVADTSAVVKDVDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNA 452
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K++S GR VI+RDN RFHRF DG CSC D+W
Sbjct: 453 VKYLSKCTGRIVILRDNRRFHRFEDGVCSCGDFW 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 3/262 (1%)
Query: 26 PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISN 85
P+ LH L+ K+ DVFVG S DMY+K G DA ++FDEMPERN+ +W+A I
Sbjct: 30 PLAPHALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICG 89
Query: 86 AVLGGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDG 144
G A++ F + L D C L C+ +L +LG Q+H +++ +
Sbjct: 90 YADAGMHSAAMEIFRLALEEAVPVNDFTVSC-ILRVCAAATLFELGAQVHARSIKTALNA 148
Query: 145 NVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ V + LV Y KC V A VF ++N W + L Q+ Q F+ +
Sbjct: 149 SPFVGSSLVSLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQ 208
Query: 205 REGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
G P S+++AC+ ++ G+ ++ + +E +A+VD+ G+ G I
Sbjct: 209 NAGFRPNSITFLSLITACSHAGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRIS 268
Query: 265 DAEIAFNKMP-ERNLVCWNAII 285
+A MP E W A++
Sbjct: 269 EALGLIESMPMEPPEYVWGALL 290
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
++H ++ K G++FVGS+++DMY KCG + DA F++MPERN+V W+A+I GYA G
Sbjct: 35 ALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAG 94
Query: 293 HADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
A+ F EAVP N T+ C+L C+ A E G ++ ++ ++K +
Sbjct: 95 MHSAAMEIFRLALE---EAVPVNDFTVSCILRVCAAATLFELGAQV-HARSIKTALNASP 150
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ +V L + GLV+ AY++ E P R + +W A LNA +G
Sbjct: 151 FVGSSLVSLYSKCGLVECAYQVFGEAPER-NLGIWNAGLNASAQHG 195
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 4 ECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD 63
E + NDFT C+ + +A + G Q+HA ++K+ FVG S +YSK GL +
Sbjct: 109 EAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYSKCGLVEC 168
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++F E PERNL WNA ++ + G A F++++ G P+ ITF + + ACS
Sbjct: 169 AYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITFLSLITACSH 228
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI-IDKNDVSWCS 182
L+ G++ + + +VD G+ + A + + + ++ + W +
Sbjct: 229 AGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGA 288
Query: 183 MLVVYVQNYEEENGCQMF 200
+L+ C+MF
Sbjct: 289 LLM----------ACRMF 296
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 303/536 (56%), Gaps = 7/536 (1%)
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
M+ + + A +F+EM ++ +W A +S K + F ++ G PD
Sbjct: 579 ISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDK 638
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
T L+ C + L LG+ +H + G + +++V N L++ Y C + A F+
Sbjct: 639 FTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFET 698
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ ++ VSW M Y Q + +F + EGV+P S+ L+ A + G
Sbjct: 699 MKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG 758
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ HA+A ++ ++ ++ V + LV +Y KCG + +A F + +V NAIIG A
Sbjct: 759 KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQH 818
Query: 292 GHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G ++ A+ F +M E V P+ TLV ++SAC AG VE+G F +M +GI P
Sbjct: 819 GFSEEAVKMFWKMQQ---EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPT 875
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHYAC VDLLGRAG ++ A +II++MP VW +LL C++ G ELG A +
Sbjct: 876 LEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRIL 935
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+LDP++S HV+LSN++ ATG+W++AD+ RK+M D +K G SW + ++H F A D
Sbjct: 936 ELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGD 995
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH + EI +L KL M+ AGY D DVE+E K +G+HSE+IA+AFGLIA
Sbjct: 996 RSHPKTDEIYVVLDKLELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIA 1052
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PP ++I KNLR+CGDCH+A K+IS ++GRE+IVRD+ RFH F +G CSC D W
Sbjct: 1053 TPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 16/376 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
I PN +F + A S G+++H+L L + + + V MY K G +A
Sbjct: 433 IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEA 492
Query: 65 DKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+ +F EMP R+L TWN + R K A A + + + G PD ++F + L++C
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVC--NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS Q + L ++ SG+ S C L+ +G+C E+ A+ VF+ + + VSW
Sbjct: 553 -CS--QEAQVLRMCILESGYR---SACLETALISMHGRCRELEQARSVFNEMDHGDVVSW 606
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +N + + +F + EGV P F +++ L C L LG+ +HA +
Sbjct: 607 TAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTE 666
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+E +I V +AL++MY CG ++A F M R+LV WN + YA G A A+
Sbjct: 667 IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F + M+ E V P+ +T L+ + V G K+F+++ + G+ +V
Sbjct: 727 FRQ---MQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVK 782
Query: 360 LLGRAGLVDRAYEIIK 375
L + G +D A + +
Sbjct: 783 LYAKCGKLDEAMSLFR 798
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 192/462 (41%), Gaps = 53/462 (11%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK H L +G +F+G +MY + G ++A +F +M ERN+ +W A IS
Sbjct: 44 GKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103
Query: 89 GGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A F L + P+ T A LNAC++ L +GR +H + G + +
Sbjct: 104 CGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERAST 163
Query: 148 ----VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE-EENGCQMFLT 202
V N +++ Y KC + A VF I +K+ VSW +M Y Q + ++F
Sbjct: 164 TATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ + P + L AC L G +H++ +A + + +AL++MYGKCG
Sbjct: 224 MLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGD 280
Query: 263 IQDAEIAFNKMPER---NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTL 318
+ A F M R +LV WNA+I G A++ F +R E + PN VTL
Sbjct: 281 WEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR---LRLEGMRPNSVTL 337
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ +L+A + +G + F+ + G ++ + + G A+ + + +
Sbjct: 338 ITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR 397
Query: 379 MRPTISVWG-----------------------------------ALLNACRVYGKPELGR 403
+ + W A+LNAC + GR
Sbjct: 398 WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457
Query: 404 IAADNLF--KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+ + D +S +L +M+ G EA+LV KEM
Sbjct: 458 KIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEM 499
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 187/399 (46%), Gaps = 20/399 (5%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHA----LALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+PN +T + A + G+ +HA L L+ VG + +MY+K G +
Sbjct: 124 APNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLE 183
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRP--KNAIDAFINLRRTGGEPDLITFCAFLNA 120
DA +F +PE+++ +W A ++ A R +A+ F + P++ITF L A
Sbjct: 184 DAIAVFLAIPEKDVVSWTA-MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGA 242
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND--- 177
C+ L+ G LH L + + N L++ YGKC + A VF + + +
Sbjct: 243 CTS---LRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDL 299
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG--RSVH 235
VSW +M+ V+ + +F R EG+ P + ++L+A A +G++ G R H
Sbjct: 300 VSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA-ASGVDFGAARGFH 358
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHA 294
++ ++ +G+A++ MY KCG A F ++ + +++ WN ++G +
Sbjct: 359 GRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSF 418
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
+++F M + PN V+ + +L+ACS + A++ G KI + + +
Sbjct: 419 GKVVNTFHHMLLAGID--PNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA 476
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNA 392
+V + G+ G + A + KEMP+ ++ W +L A
Sbjct: 477 TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 2/298 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P+ FT A GK +HA + G D+ V + +MYS G
Sbjct: 629 MQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGD 688
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A F+ M R+L +WN + G K A+ F ++ G +PD +TF LN
Sbjct: 689 WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNV 748
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+L+ G+ H SG D +VSV GLV Y KC ++ A +F G D V
Sbjct: 749 SGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLL 808
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+++ Q+ E +MF ++EGV P + S++SAC +E G S +
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKE 868
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + + VD+ G+ G ++ AE KMP E N + W +++G QG A++
Sbjct: 869 YFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAEL 926
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 150/304 (49%), Gaps = 16/304 (5%)
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R DL + A L +C D + L G+ H + +G + ++ + N L++ Y +C +
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSAC 222
A +F + ++N VSW +++ Q +F T E P + + ++L+AC
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 223 ARIAGLELGRSVHAVAVKACVE----GNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
A L +GRS+HA+ + +E VG+A+++MY KCGS++DA F +PE+++
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDV 197
Query: 279 VCWNAIIGGYAHQG--HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
V W A+ G YA + + D AL F EM + PN +T + L AC+
Sbjct: 198 VSWTAMAGAYAQERRFYPD-ALRIFREM--LLQPLAPNVITFITALGACTSLRDGTWLHS 254
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV--WGALLNACR 394
+ + +L G P A + ++++ G+ G + AY + K M R + + W A+++A
Sbjct: 255 LLHEASL--GFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310
Query: 395 VYGK 398
G+
Sbjct: 311 EAGR 314
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 192/450 (42%), Gaps = 42/450 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+R E + PN T + A +A + + H +SG + DV +G + MY+K G
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCG 384
Query: 60 LKDDADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +F + + ++ +WN + + ++ F ++ G +P+ ++F A L
Sbjct: 385 FFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDK 175
NACS+ L GR++H ++ D SV LV YGKC + A++VF + +
Sbjct: 445 NACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSR 504
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC--------ARIAG 227
+ V+W ML Y QN + + + GV P +SVLS+C R+
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCI 564
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G AC+E +AL+ M+G+C ++ A FN+M ++V W A++
Sbjct: 565 LESGYR------SACLE------TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSA 612
Query: 288 YAHQGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
A + F M+ E V P+ TL L C + + G K+ ++ + G
Sbjct: 613 TAENRDFKEVHNLFRR---MQLEGVIPDKFTLATTLDTCLASTTLGLG-KVIHACVTEIG 668
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW----------GALLNACRVY 396
++ ++++ G A + M R +S W G A ++
Sbjct: 669 LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS-WNIMSAAYAQAGLAKEAVLLF 727
Query: 397 GKPELGRIAADNL-FKLDPNDSGNHVLLSN 425
+ +L + D L F N SG L+S+
Sbjct: 728 RQMQLEGVKPDKLTFSTTLNVSGGSALVSD 757
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/483 (39%), Positives = 294/483 (60%), Gaps = 3/483 (0%)
Query: 105 TGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL 164
G P+ +TF + ++AC + G +HG +++SG V V N L++ YGK ++
Sbjct: 631 VGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLIS 690
Query: 165 AKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACAR 224
+ +F+ + KN VSW +M+V+++QN E G F +R G++P +VL C
Sbjct: 691 SCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCED 750
Query: 225 IAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAI 284
I + L + +H + + N + +AL+D+Y K G ++D+ F ++ + + W A+
Sbjct: 751 IGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAM 810
Query: 285 IGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+ YA G+ A+ FE M P++VT +L+ACS +G VE+G F +M+ +
Sbjct: 811 LAAYATHGYGRDAIKHFELMVHYGLS--PDHVTFTHLLNACSHSGLVEEGRYYFETMSKR 868
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRI 404
Y I+P +HY+C+VDL+GR+GL+ AY +IKEMPM P+ VWGALL ACRVY +LG
Sbjct: 869 YRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 928
Query: 405 AADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIH 464
AA LF+L+P D N+++LSN+++A+G W++A +R MK G+ + +G S+I N+IH
Sbjct: 929 AAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIH 988
Query: 465 IFQAKDTSHERNTEIQAMLTKLREEMKAA-GYIPDTNFALYDVEEEEKMTEVGHHSEKIA 523
F D SH + +IQ L ++R++MK+ G+ T F L+DV+E+ K + HSEKIA
Sbjct: 989 KFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIA 1048
Query: 524 LAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCS 583
+AFGL+ I P PI I KNLRICGDCH K IS I R +I+RD+ RFH F +G CSC
Sbjct: 1049 MAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCR 1108
Query: 584 DYW 586
DYW
Sbjct: 1109 DYW 1111
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 308/587 (52%), Gaps = 43/587 (7%)
Query: 30 KQLHALALKSGQIHD-----VFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYIS 84
+Q+HA G + D FV A ++ D A+++ D + L N+ I
Sbjct: 31 RQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYL---DYANQILDRSDKPTLFALNSMIR 87
Query: 85 NAVLGGRPKNAIDAFINLRRTGG--EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
P+ + D + + +G +PD T + AC+ + + G Q+HG +R GF
Sbjct: 88 AHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGF 147
Query: 143 DGNVSVCNGLVDFY-------------------------------GKCNEVGLAKVVFDG 171
D + V GL+ Y +C +V A+ +F+G
Sbjct: 148 DNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEG 207
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ +K+ ++W +M+ Y Q E +F + EGV+ + SVLSAC ++ L+ G
Sbjct: 208 MPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQG 267
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
R H+ + ++ + +G+ LVD+Y KCG + A F M E+N+ W++ + G A
Sbjct: 268 RWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMN 327
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G + L F M + PN VT V VL CS G V++G K F SM ++GI+P
Sbjct: 328 GFGEKCLKLFSLMK--QDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQL 385
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+HY C+VDL RAG ++ A II++MPM+ +VW +LL+A R+Y ELG +A+ + +
Sbjct: 386 DHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLE 445
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
L+ ++ G +VLLSN++A + W+ VR+ MK G++K GCS + V +H F D
Sbjct: 446 LETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDK 505
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH + EI A+ + ++ AGY DT ++D++EEEK + HSEK A+AFG++++
Sbjct: 506 SHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSL 565
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
VPIRI KNLR+CGDCH IS I RE+IVRD NRFH F DG
Sbjct: 566 KADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 612
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 1 MRREC-ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
MR E PN+ TF + A G +H L +KSG + +V V + ++Y KTG
Sbjct: 627 MRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTG 686
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
+ K+F+++ +NL +WN I + G + + F R G +PD TF A L
Sbjct: 687 DLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLR 746
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVS 179
C D +++L + +HG ++ GF+ N + L+D Y K + + VF I + ++
Sbjct: 747 VCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMA 806
Query: 180 WCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR-SVHAVA 238
W +ML Y + + + F G+ P + +L+AC+ +E GR ++
Sbjct: 807 WTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMS 866
Query: 239 VKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMA 297
+ +E + S +VD+ G+ G +QDA +MP E + W A++G +
Sbjct: 867 KRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLG 926
Query: 298 LSSFEEMTSMRCEAVPNYVTLVCVLSA 324
+ + + + NY+ L + SA
Sbjct: 927 TKAAKRLFELEPRDGRNYIMLSNIYSA 953
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 154/346 (44%), Gaps = 33/346 (9%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDD-- 63
+ P+++T L +A + L + TG Q+H + ++ G +D V +Y++ G D
Sbjct: 112 LKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 171
Query: 64 -----------------------------ADKMFDEMPERNLATWNAYISNAVLGGRPKN 94
A K+F+ MPE++ WNA IS G +
Sbjct: 172 KVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESRE 231
Query: 95 AIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVD 154
A++ F ++ G + + ++ + L+AC+ L GR H ++ R+ V + LVD
Sbjct: 232 ALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVD 291
Query: 155 FYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
Y KC ++ A VF G+ +KN +W S L N E ++F +++GV P
Sbjct: 292 LYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVT 351
Query: 215 ISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
SVL C+ + ++ G + ++ + +E + LVD+Y + G ++DA +M
Sbjct: 352 FVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQM 411
Query: 274 PER-NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
P + + W++++ + ++ + + ++M + YV L
Sbjct: 412 PMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLL 457
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + N + + A + L G+ H+ ++ V +G + D+Y+K G
Sbjct: 239 MQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGD 298
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A ++F M E+N+ TW++ ++ + G + + F +++ G P+ +TF + L
Sbjct: 299 MDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRG 358
Query: 121 CSDCSLLQLGRQLHGFLVRS--GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV 178
CS + G Q H +R+ G + + LVD Y + + A + + K
Sbjct: 359 CSVVGFVDEG-QKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHA 417
Query: 179 S-WCSML 184
+ W S+L
Sbjct: 418 AVWSSLL 424
>gi|15240665|ref|NP_199850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171167|sp|Q9FK33.1|PP427_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50390, chloroplastic; Flags: Precursor
gi|9758921|dbj|BAB09458.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008555|gb|AED95938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 329/580 (56%), Gaps = 8/580 (1%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEM 71
T+ L +A L K+++ + +G + ++ M+ K G+ DA ++FDE+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 72 PERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
PERNL ++ + IS V G A + F + + + TF L A + + +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVY-VQN 190
QLH ++ G N V GL+D Y KC ++ A+ F+ + +K V+W +++ Y +
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 191 YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVG 250
Y EE C ++ R GV F +S ++ ++A LEL + HA ++ E I
Sbjct: 305 YSEEALCLLY-DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 251 SALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCE 310
+ALVD Y K G + A F+K+P +N++ WNA++GGYA+ G A+ FE+M +
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA--AN 421
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
PN+VT + VLSAC+ +G E+G +IF SM+ +GIKP A HYAC+++LLGR GL+D A
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAAT 430
I+ P++ T+++W ALLNACR+ ELGR+ A+ L+ + P GN+V++ NM+ +
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSM 541
Query: 431 GRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNT----EIQAMLTKL 486
G+ EA V + ++ G+ C+W+ V ++ H F + D N +I + +L
Sbjct: 542 GKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDEL 601
Query: 487 REEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRIC 546
EE+ GY + L DV+E+E+ +HSEK+A+A+GL+ P P++IT+N RIC
Sbjct: 602 MEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRIC 661
Query: 547 GDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+CH +FIS + GRE++VRD +RFH F +G CSC YW
Sbjct: 662 KNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR +S + FT + + S+ L KQ HA +++G ++ + D YSK G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D A +FD++P +N+ +WNA + GR +A+ F + P+ +TF A L+A
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSA 435
Query: 121 CSDCSLLQLGRQLHGFLVRS---GFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND 177
C+ L + G ++ FL S G +++ G+ DG++D+
Sbjct: 436 CAYSGLSEQGWEI--FLSMSEVHGIKPRAMHYACMIELLGR-----------DGLLDEA- 481
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+ ++ RR ++ M +++L+AC LELGR V
Sbjct: 482 -------IAFI---------------RRAPLKTTVNMWAALLNACRMQENLELGR---VV 516
Query: 238 AVKACVEGNIFVGSALV--DMYGKCGSIQDAEIAFNKMPERNL 278
A K G +G+ +V +MY G +A + + L
Sbjct: 517 AEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 302/536 (56%), Gaps = 7/536 (1%)
Query: 52 FDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDL 111
M+ + + A +FDEM ++ +W A +S K F ++ G PD
Sbjct: 579 ISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDK 638
Query: 112 ITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDG 171
T L+ C D + L LG+ +H + G + +++V N L++ Y C + A F+
Sbjct: 639 FTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFET 698
Query: 172 IIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG 231
+ ++ VSW M Y Q + +F + EGV+P S+ L+ A + G
Sbjct: 699 MKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG 758
Query: 232 RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQ 291
+ H +A ++ ++ ++ V + LV +Y KCG + +A F + +V NAIIG A
Sbjct: 759 KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQH 818
Query: 292 GHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPG 350
G ++ A+ F +M E V P+ TLV ++SAC AG VE+G F +M +GI P
Sbjct: 819 GFSEEAVKMFWKMQQ---EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPT 875
Query: 351 AEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLF 410
EHYAC VDLLGRAG ++ A +II++MP VW +LL C++ G ELG A +
Sbjct: 876 LEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRIL 935
Query: 411 KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKD 470
+LDP++S HV+LSN++ ATG+W++AD+ RK++ D +K G SW+ + ++H F A D
Sbjct: 936 ELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGD 995
Query: 471 TSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIA 530
SH + EI +L KL M+ AGY D D E+E K +G+HSE+IA+AFGLIA
Sbjct: 996 RSHPQTDEIYVVLDKLELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIA 1052
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PP ++I KNLR+CGDCH+A K+IS I+GRE+IVRD+ RFH F +G CSC D W
Sbjct: 1053 TPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 17/401 (4%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIH-DVFVGCSAFDMYSKTGLKDDA 64
I PN +F + A S G+++H+L L + + + V MY K G +A
Sbjct: 433 IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEA 492
Query: 65 DKMFDEMP--ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACS 122
+ +F EMP R+L TWN + R K A A + + + G PD ++F + L++C
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552
Query: 123 DCSLLQLGRQLHGFLVRSGFDGNVSVC--NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
CS Q + L ++ SG+ S C L+ +G+C E+ A+ VFD + + VSW
Sbjct: 553 -CS--QEAQVLRMCILESGYR---SACLETALISMHGRCRELEQARSVFDEMDHGDVVSW 606
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+ +N + + +F + EGV P F +++ L C L LG+ +HA +
Sbjct: 607 TAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTE 666
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+E +I V +AL++MY CG ++A F M R+LV WN + YA G A A+
Sbjct: 667 IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726
Query: 301 FEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVD 359
F M+ E V P+ +T L+ + V G K+F+ + + G+ +V
Sbjct: 727 FRH---MQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVK 782
Query: 360 LLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
L + G +D A + + + T+ + A++ A +G E
Sbjct: 783 LYAKCGKLDEAISLFRG-ACQWTVVLLNAIIGALAQHGFSE 822
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 193/462 (41%), Gaps = 53/462 (11%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
GK+ H L +G +F+G +MY + G ++A +F +M ERN+ +W A IS
Sbjct: 44 GKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103
Query: 89 GGRPKNAIDAF-INLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
G A F L + P+ T A LNAC++ L +GR +H + G + +
Sbjct: 104 SGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLEREST 163
Query: 148 ----VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE-EENGCQMFLT 202
V N +++ Y KC A VF I +K+ VSW +M Y Q + ++F
Sbjct: 164 TATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGS 262
+ + P + L AC L G +H++ +A + + G+AL++MYGKCG
Sbjct: 224 MLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGD 280
Query: 263 IQDAEIAFNKMPER---NLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PNYVTL 318
+ A F M R +LV WNA+I G A++ F +R E + PN VTL
Sbjct: 281 WEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR---LRLEGMRPNSVTL 337
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ +L+A + +G + F+ + G ++ + + G A+ + + +
Sbjct: 338 ITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR 397
Query: 379 MRPTISVWG-----------------------------------ALLNACRVYGKPELGR 403
+ + W A+LNAC + GR
Sbjct: 398 WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457
Query: 404 IAADNLF--KLDPNDSGNHVLLSNMFAATGRWEEADLVRKEM 443
+ + D +S +L +M+ G EA+LV KEM
Sbjct: 458 KIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM 499
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 185/398 (46%), Gaps = 18/398 (4%)
Query: 7 SPNDFTFPCLFKASSALHIPVTGKQLHA----LALKSGQIHDVFVGCSAFDMYSKTGLKD 62
+PN +T + A + G+ +HA L L+ VG + +MY+K G +
Sbjct: 124 APNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPE 183
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGR-PKNAIDAFINLRRTGGEPDLITFCAFLNAC 121
DA +F +PE+++ +W A R +A+ F + P++ITF L AC
Sbjct: 184 DAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC 243
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKND---V 178
+ L+ G LH L +G + N L++ YGKC + A VF + + + V
Sbjct: 244 TS---LRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLV 300
Query: 179 SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG--RSVHA 236
SW +M+ V+ + +F R EG+ P + ++L+A A +G++ G R H
Sbjct: 301 SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA-ASGVDFGAARKFHG 359
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAIIGGYAHQGHAD 295
++ ++ VG+A++ MY KCG A F ++ + +++ WN ++G +
Sbjct: 360 RIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFG 419
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
+++F M + PN V+ + +L+ACS + A++ G KI + + +
Sbjct: 420 KVVNTFHHMLLAGID--PNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPM-RPTISVWGALLNA 392
+V + G+ G + A + KEMP+ ++ W +L A
Sbjct: 478 MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 2/298 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E + P+ FT GK +HA + G D+ V + +MYS G
Sbjct: 629 MQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGD 688
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+A F+ M R+L +WN + G K A+ F +++ G +PD +TF LN
Sbjct: 689 WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNV 748
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+L+ G+ HG SG D +VSV GLV Y KC ++ A +F G V
Sbjct: 749 SGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLL 808
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELG-RSVHAVAV 239
+++ Q+ E +MF ++EGV P + S++SAC +E G S +
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKE 868
Query: 240 KACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+ + + VD+ G+ G ++ AE KMP E N + W +++G QG A++
Sbjct: 869 YFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAEL 926
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 16/304 (5%)
Query: 104 RTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVG 163
R DL + A L +C D + L G++ H + +G + ++ + N L++ Y +C +
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 164 LAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSAC 222
A +F + ++N VSW +++ Q+ +F T E P + + ++L+AC
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 223 ARIAGLELGRSVHAVAVKACVEGN----IFVGSALVDMYGKCGSIQDAEIAFNKMPERNL 278
A L +GRS+HA+ + +E VG+A+++MY KCGS +DA F +PE+++
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDV 197
Query: 279 VCWNAIIGGYAHQG--HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMK 336
V W A+ G YA + + D AL F EM + PN +T + L AC+ ++ G
Sbjct: 198 VSWTAMAGAYAQERRFYPD-ALRIFREM--LLQPLAPNVITFITALGACT---SLRDGTW 251
Query: 337 IFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISV--WGALLNACR 394
+ +S+ + G+ ++++ G+ G + AY + K M R + + W A+++A
Sbjct: 252 L-HSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASV 310
Query: 395 VYGK 398
G+
Sbjct: 311 EAGR 314
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 194/454 (42%), Gaps = 50/454 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPV-TGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
+R E + PN T + A +A + ++ H +SG + DV VG + MY+K G
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCG 384
Query: 60 LKDDADKMFDEMPER-NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFL 118
A +F + + ++ +WN + + ++ F ++ G +P+ ++F A L
Sbjct: 385 FFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFDG-NVSVCNGLVDFYGKCNEVGLAKVVFD--GIIDK 175
NACS+ L GR++H ++ D SV LV YGKC + A++VF + +
Sbjct: 445 NACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSR 504
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSAC--------ARIAG 227
+ V+W ML Y QN + + + GV P +SVLS+C R+
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCI 564
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGG 287
LE G AC+E +AL+ M+G+C ++ A F++M ++V W A++
Sbjct: 565 LESGYR------SACLE------TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSA 612
Query: 288 YAHQGHADMALSSFEEM----TSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMT 342
A F+E+ M+ E V P+ TL L C + + G KI ++
Sbjct: 613 TAEN-------RDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG-KIIHACV 664
Query: 343 LKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVW----------GALLNA 392
+ G++ ++++ G A + M R +S W G A
Sbjct: 665 TEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS-WNIMSAAYAQAGLAKEA 723
Query: 393 CRVYGKPELGRIAADNL-FKLDPNDSGNHVLLSN 425
++ +L + D L F N SG L+S+
Sbjct: 724 VLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSD 757
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 321/594 (54%), Gaps = 44/594 (7%)
Query: 31 QLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGG 90
Q+HA L+ G H + Y+ G + +F P N+ W I+
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
+A+ + + +P+ T + L AC+ L R +H ++ G ++ V
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVST 156
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQN---------YE--------- 192
GLVD Y + +V A+ +FD + +++ VS+ +ML Y ++ +E
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVC 216
Query: 193 --------EENGC--QMFLTARREG----------VEPKDFMISSVLSACARIAGLELGR 232
++GC + + R+ V P + + +VLS+C ++ LE G+
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK 276
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
VH+ ++ N+ VG+ALVDMY KCGS++DA F+ M +++V WN++I GY G
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHG 336
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
+D AL F EM + + P+ +T V VL+AC+ AG V KG ++F SM YG++P E
Sbjct: 337 FSDEALQLFHEMCCIGVK--PSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVE 394
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C+V+LLGRAG + AY++++ M + P +WG LL ACR++ LG A+ L
Sbjct: 395 HYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSN 454
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
SG +VLLSNM+AA W VR MK G++K GCS I VKNR+H F A D
Sbjct: 455 GLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRR 514
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H R+ +I +ML K+ +K Y P T+ L+D+ E+EK + HSEK+ALAFGLI+
Sbjct: 515 HPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTS 574
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I+I KNLR+C DCH+ K +S I GR++I+RD NRFH F +G CSC DYW
Sbjct: 575 PGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 46/338 (13%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M I PN FT L KA + LH + +H+ A+K G ++V D Y++ G
Sbjct: 112 MLTHPIQPNAFTLSSLLKACT-LH---PARAVHSHAIKFGLSSHLYVSTGLVDAYARGGD 167
Query: 61 KDDADKMFDEMPERNLATWNAYIS--------------------------NAVLGGRPKN 94
A K+FD MPER+L ++ A ++ N ++ G ++
Sbjct: 168 VASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQH 227
Query: 95 AI--DAFINLRRTGG----------EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGF 142
+A + R+ P+ IT A L++C L+ G+ +H ++ +G
Sbjct: 228 GCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGI 287
Query: 143 DGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLT 202
NV V LVD Y KC + A+ VFD + K+ V+W SM++ Y + + Q+F
Sbjct: 288 KVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHE 347
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEGNIFVGSALVDMYGKCG 261
GV+P D +VL+ACA + G V ++ +E + +V++ G+ G
Sbjct: 348 MCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAG 407
Query: 262 SIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMAL 298
+Q+A M E + V W ++ +A + H++++L
Sbjct: 408 RMQEAYDLVRSMEVEPDPVLWGTLL--WACRIHSNVSL 443
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 318/593 (53%), Gaps = 18/593 (3%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKM 67
P+ +T + A SA + G Q+H +K + +G S MY+K+G + A +
Sbjct: 177 PSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRA 236
Query: 68 FDEMPERNLATWNAYISN-AVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSL 126
F +P++N+ TW IS A + + F+++ G P+ T + ++ C
Sbjct: 237 FRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLD 296
Query: 127 LQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVV 186
L LG+Q+ F + G N+ V N + Y + E A F+ + D + ++W +M+
Sbjct: 297 LNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISG 356
Query: 187 YVQNYEEE-----------NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
Y Q E ++F +R ++P F SS+LS C+ + LE G +H
Sbjct: 357 YAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIH 416
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K ++ V SALV+MY KCG I+DA AF +M R LV W ++I GY+ G
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQ 476
Query: 296 MALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHY 354
A+ FE+M R V PN +T VCVLSACS AG EK F M +Y I+P +HY
Sbjct: 477 EAIQLFEDM---RFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHY 533
Query: 355 ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDP 414
C+VD+ R G +D A+ I+ P ++W +L+ CR +G EL AAD L +L P
Sbjct: 534 GCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRP 593
Query: 415 NDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHE 474
+VLL NM+ + RW + VRK MK G+ SWI++K++++ F+A D +HE
Sbjct: 594 KGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHE 653
Query: 475 RNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEK--MTEVGHHSEKIALAFGLIAIP 532
+ E+ +L L E+ K GY P + L D E+++K V HHSE++A+A GL+ P
Sbjct: 654 LSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTP 713
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDY 585
PG +R+TKN+ +C DCHS+ KF S + RE++VRD+ R H+F DG CSC D+
Sbjct: 714 PGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 198/404 (49%), Gaps = 29/404 (7%)
Query: 21 SALHIPV------TG-----KQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFD 69
SA+++P+ TG + LH +K+G D+FV S + Y + G DA +FD
Sbjct: 78 SAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFD 137
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
+MPE+N+ TW A I+ + + A++ F+ + G P T A LNACS + L
Sbjct: 138 QMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADL 197
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYV- 188
G Q+HG+ ++ S+ N L Y K + A F + DKN ++W +M+
Sbjct: 198 GSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAE 257
Query: 189 -QNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNI 247
+NY E G +FL +GV P +F ++SV+S C L LG+ V A K + NI
Sbjct: 258 DENYTEL-GLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNI 316
Query: 248 FVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-----------QGHADM 296
V ++ + +Y + G +A F +M + +++ WNA+I GYA +
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQ 376
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
AL F + R P+ T +LS CS A+E+G +I ++ T+K G +
Sbjct: 377 ALKVFRNLK--RSAMKPDLFTFSSILSVCSSMMALEQGEQI-HAQTIKTGFLSDVVVNSA 433
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
+V++ + G ++ A + EM +R T+ W ++++ +G+P+
Sbjct: 434 LVNMYNKCGCIEDATKAFVEMSIR-TLVTWTSMISGYSQHGRPQ 476
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 18/339 (5%)
Query: 79 WNAYISNAVLGG-------RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGR 131
WN A G RP + +A LR G + L+ C + L R
Sbjct: 40 WNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLRE-GKTVQSAMYVPLLHVCVETGSLGGAR 98
Query: 132 QLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNY 191
LHG +V++G ++ V LV+ Y +C A+ +FD + +KN V+W +++ Y N
Sbjct: 99 ALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNS 158
Query: 192 EEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGS 251
+ ++F+ G P + + ++L+AC+ +LG VH +K +G+
Sbjct: 159 QLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGN 218
Query: 252 ALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH-QGHADMALSSFEEMTSMRCE 310
+L MY K GS++ A AF +P++N++ W +I A + + ++ L+ F +M +
Sbjct: 219 SLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDM--LMDG 276
Query: 311 AVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRA 370
+PN TL V+S C + G ++ + K G + + L R G D A
Sbjct: 277 VLPNEFTLTSVMSLCGTRLDLNLGKQV-QAFCFKIGCQTNIPVKNSTMYLYLRKGETDEA 335
Query: 371 YEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNL 409
+EM +I W A+++ G ++ A D+L
Sbjct: 336 MRFFEEMD-DVSIITWNAMIS-----GYAQIMETAKDDL 368
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
++R + P+ FTF + S++ G+Q+HA +K+G + DV V + +MY+K G
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DA K F EM R L TW + IS GRP+ AI F ++R G P+ ITF L+A
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSA 503
Query: 121 CSDCSL-------------------------------LQLGR--QLHGFLVRSGFDGNVS 147
CS L ++LGR F+ R+GF+ N +
Sbjct: 504 CSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEA 563
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIID---KNDVSWCSMLVVYVQNYEEENGCQMFLTAR 204
+ + LV + LA D +I+ K ++ +L +Y+ N + ++ +
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMK 623
Query: 205 REGV 208
+EG+
Sbjct: 624 QEGL 627
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 325/585 (55%), Gaps = 6/585 (1%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKS---GQIHDVFVGCSAFDMYSKTGLKD 62
+ PN T L + G +HA L++ V +G + DMY+K
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257
Query: 63 DADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNAC 121
A ++F MP RN TW+A I VL R A + F ++ G + + L C
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC 317
Query: 122 SDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWC 181
+ + L +G QLH + +SG +++ N L+ Y K + A + FD I K+ +S+
Sbjct: 318 ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYG 377
Query: 182 SMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKA 241
++L VQN + E +F + +EP + S++ AC+ +A L+ G+ H +
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437
Query: 242 CVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSF 301
+ + ++L+DMY KCG I + F+KMP R++V WN +I GY G A + F
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497
Query: 302 EEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLL 361
M + P+ VT +C+++ACS +G V +G F +MT KYGI P EHY C+VDLL
Sbjct: 498 LGMKNQGF--APDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL 555
Query: 362 GRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHV 421
R GL+D AY+ I+ MP++ + VWGALL ACR++ +LG+ + + KL P +GN V
Sbjct: 556 ARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFV 615
Query: 422 LLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQA 481
LLSN+F+A GR++EA VR K G KK G SWI + +H F D SH + +I
Sbjct: 616 LLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYH 675
Query: 482 MLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITK 541
L + ++K GY DT+F L D+EEEEK + +HSEK+A+AFG++++ I +TK
Sbjct: 676 ELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTK 735
Query: 542 NLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
NLR+CGDCH+A K+++ + R +IVRD NRFH F +G CSC ++W
Sbjct: 736 NLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 200/402 (49%), Gaps = 9/402 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R ++PN +TFP + KA SAL G+ +HA A +G D+FV + D+Y +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLN 119
A +F +MP R++ WNA ++ G +AI ++++ GG P+ T + L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 120 ACSDCSLLQLGRQLHGFLVRSGFDGN---VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
+ L G +H + +R+ + N V + L+D Y KC ++ A VF G+ +N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGV-EPKDFMISSVLSACARIAGLELGRSVH 235
DV+W +++ +V +F EG+ ++S L CA +A L +G +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A+ K+ + ++ ++L+ MY K G I +A + F+++ ++ + + A++ G G A+
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
A F++M + C P+ T+V ++ ACS A++ G K + + G+
Sbjct: 391 EAFLVFKKMQA--CNMEPDIATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICN 447
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
++D+ + G +D + ++ +MP R +S W ++ ++G
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVS-WNTMIAGYGIHG 488
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 23/349 (6%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD +P + +NA I G AID + ++ R P+ TF L ACS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSM 183
L+ GR +H +G ++ V L+D Y +C G A+ VF + ++ V+W +M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 184 LVVYVQNYEEENGCQMFLTARRE-GVEPKDFMISSVLSACARIAGLELGRSVHAVAVKAC 242
L Y + + L + G+ P + S+L A+ L G S+HA ++AC
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 243 VEGN---IFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALS 299
+E N + +G+AL+DMY KC + A F+ MP RN V W+A+IGG+ A +
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFN 292
Query: 300 SFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI--------FYSMTLKYGIKPGA 351
F++M V +C LSA S A A+ + +++ K GI
Sbjct: 293 LFKDM----------LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
++ + +AGL++ A E+ ++ TIS +GALL+ C GK E
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAE 390
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 12/236 (5%)
Query: 161 EVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLS 220
++ LA+ VFD I + ++ +++ Y ++ + R V P + VL
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 221 ACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVC 280
AC+ + L GR++HA A A + ++FV +AL+D+Y +C A F KMP R++V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVA 168
Query: 281 WNAIIGGYAHQG---HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKI 337
WNA++ GYA+ G HA L ++ +R PN TLV +L ++ GA+ +G I
Sbjct: 169 WNAMLAGYANHGMYHHAIAHLLDMQDHGGLR----PNASTLVSLLPLLAQHGALFQGTSI 224
Query: 338 FYSMTLKYGIKPGAEHY---ACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ L+ ++ E ++D+ + + A + MP+R ++ W AL+
Sbjct: 225 -HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-WSALI 278
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 296/548 (54%), Gaps = 42/548 (7%)
Query: 79 WNAYI-----SNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQL 133
WN I + A G + I F+ +R G +PD TF L + + SLL LGR +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 134 HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFD--------------------GII 173
H ++R G + V L+ Y C +G A+ VFD G++
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 174 D-----------KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGV---EPKDFMISSVL 219
D +N +SW M+ YV+ + + +F + GV P +F +S VL
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 220 SACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM-PERNL 278
+AC R+ LE G+ HA K + ++ +G+AL+DMY KCGS++ A F+ + P +++
Sbjct: 207 AACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDV 266
Query: 279 VCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIF 338
+ W+A+I G A G A+ + F +M + PN VT + V AC G V +G
Sbjct: 267 MAWSAMISGLAMHGLAEECVGLFSKMINQGVR--PNAVTFLAVFCACVHGGLVSEGKDYL 324
Query: 339 YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGK 398
MT Y I P +HY C+VDL GRAG + A+ ++K MPM P + VWGALL+ R++G
Sbjct: 325 RRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD 384
Query: 399 PELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWIS 458
E +A L +L+P +SG +VLLSN++A GRWE+ VR M+ +GIKK GCS I
Sbjct: 385 IETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIE 444
Query: 459 VKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHH 518
V +H F D SH +I ML ++ E +K GY+ +T L D++EE K + H
Sbjct: 445 VGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLH 504
Query: 519 SEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDG 578
SEK+ALA+G + PG PIRI KNLRIC DCH A K IS + RE+IVRD NRFH F G
Sbjct: 505 SEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQG 564
Query: 579 YCSCSDYW 586
CSC DYW
Sbjct: 565 LCSCRDYW 572
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 155/384 (40%), Gaps = 43/384 (11%)
Query: 1 MRRECISPNDFTFPCL---FKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYS- 56
MR + P+ TFP L F + S LH+ G+ +HA L+ G D FV S MYS
Sbjct: 55 MRFHGVQPDFHTFPFLLQSFASPSLLHL---GRSVHAQILRFGLAIDPFVQTSLISMYSS 111
Query: 57 ------------------------------KTGLKDDADKMFDEMPERNLATWNAYISNA 86
+ GL D A +F MPERN+ +W+ I+
Sbjct: 112 CGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGY 171
Query: 87 VLGGRPKNAIDAFINLRRTG---GEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFD 143
V G+ K A+ F ++ G P+ T L AC L+ G+ H ++ + G
Sbjct: 172 VRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMP 231
Query: 144 GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLT 202
+V + L+D Y KC V A VF + DV +W +M+ + E +F
Sbjct: 232 VDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 291
Query: 203 ARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCG 261
+GV P +V AC + G+ + + + I +VD+YG+ G
Sbjct: 292 MINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAG 351
Query: 262 SIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
I++A MP E +++ W A++ G G + + +++ + YV L
Sbjct: 352 RIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSN 411
Query: 321 VLSACSRAGAVEKGMKIFYSMTLK 344
V + R V + +M +K
Sbjct: 412 VYAKRGRWEDVRHVRDLMETMGIK 435
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/609 (36%), Positives = 323/609 (53%), Gaps = 31/609 (5%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
++PN+FT KA + G +H +++G V S +YSK G DA
Sbjct: 102 VAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDAR 161
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGE-----PDLITFCAFLNA 120
++FD RNL TWNA IS G ++++ F +++ E PD TF + L A
Sbjct: 162 RVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKA 221
Query: 121 CSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCN-EVGLAKVVFDGIIDKND 177
C + G Q+H +V G N + L+D Y KC + +A VF+ + KN
Sbjct: 222 CGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNA 281
Query: 178 VSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAV 237
+ W +++V + Q + + ++F GV ++SSV+ A A +E GR VH
Sbjct: 282 IQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCY 341
Query: 238 AVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMA 297
VK ++ V ++L+DMY KCG +A F ++P RN+V W A+I G GH A
Sbjct: 342 TVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEA 401
Query: 298 LSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
+ FEEM R E V P+ V + +LSACS +G VE+ + F ++ ++P AEHYAC
Sbjct: 402 IHMFEEM---RAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYAC 458
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG + A +++ MPM PT+ VW LL+ACRV+ +GR A + L +D ++
Sbjct: 459 MVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDN 518
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ-AKDTSHER 475
N+V+LSN+FA G W E VR M+ G++K GCSW+ V H F D SH R
Sbjct: 519 PVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPR 578
Query: 476 NTEIQAMLTKLREEMKAA-GYIPD-----TNFALYDVEEEEKMTEVGHHSEKIALAF--- 526
+I +L + M+ GY P + AL+DV+EE + + HSE++A+
Sbjct: 579 AADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLL 638
Query: 527 ---------GLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWD 577
G+ IR+ KNLR+CGDCH FK +S +VGR ++VRD NRFHRF D
Sbjct: 639 LHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFED 698
Query: 578 GYCSCSDYW 586
G CSC DYW
Sbjct: 699 GVCSCKDYW 707
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 185/392 (47%), Gaps = 18/392 (4%)
Query: 19 ASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLAT 78
ASSA+H G QLH LK G D +G + DMY+K G A ++F MPERN+ +
Sbjct: 16 ASSAIH---GGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVS 72
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFL 137
W A + + G + + +R P+ T A L AC + G +HG
Sbjct: 73 WTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGAC 132
Query: 138 VRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGC 197
VR+GF+G+ V N LV Y K +G A+ VFDG + +N V+W +M+ Y +
Sbjct: 133 VRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSL 192
Query: 198 QMF--LTARR---EGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVE--GNIFVG 250
+F + RR E +P +F +S+L AC + G VHA V V N +
Sbjct: 193 LVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILA 252
Query: 251 SALVDMYGKCGSIQD-AEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
AL+DMY KC + A FN++ ++N + W +I G+A +G A+ F S
Sbjct: 253 GALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGV 312
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVD 368
A + L V+ + VE+G ++ Y++ G+ + ++D+ + GL D
Sbjct: 313 RADGH--VLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVAN--SLIDMYHKCGLTD 368
Query: 369 RAYEIIKEMPMRPTISVWGALLNACRVYGKPE 400
A +E+P R +S W A++N +G +
Sbjct: 369 EAARRFREVPARNVVS-WTAMINGLGKHGHGQ 399
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L A + S + G QLHG L++ GF + + N L+D Y KC E+ +A VF G+ ++N
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARR--EGVEPKDFMISSVLSACARIAGLELGRSV 234
VSW +++V ++++ + C L A R V P +F +S+ L AC + + G +
Sbjct: 70 VVSWTALMVGFLRHGDARE-CLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWI 128
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHA 294
H V+A EG+ V ++LV +Y K G I DA F+ RNLV WNA+I GYAH GH
Sbjct: 129 HGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHG 188
Query: 295 DMALSSFEEMTSMRCEA---VPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLK 344
+L F EM R E P+ T +L AC GA +G ++ +M ++
Sbjct: 189 RDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIR 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
MI+ +L A A + + G +H +K + +G+ L+DMY KCG ++ A F M
Sbjct: 6 MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
PERN+V W A++ G+ G A L M S+ + PN TL L AC G +
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSL-SDVAPNEFTLSASLKACGVVGDMAA 124
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLN 391
G+ I + ++ G + +V L + G + A + R ++ W A+++
Sbjct: 125 GVWI-HGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVT-WNAMIS 180
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 303/555 (54%), Gaps = 34/555 (6%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A +F + + +N+ I P A+ + + ++G +PD +T+ + AC++
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 124 CSLLQLGRQLHGFLVRSGFD-------------------------------GNVSVCNGL 152
S+ G +H +V+SGF+ +V N +
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 153 VDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKD 212
+D Y K E+G A++VFD ++ ++ +SW +M+ Y + +F R GV+P +
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNK 272
+ S+LSACA + L+ G +H +E N VG+ALVDMY KCG I A FN
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358
Query: 273 MPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE 332
M ++++ WN II G A G+ A F+EM E PN +T V +LSACS AG V+
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE--PNDITFVAILSACSHAGMVD 416
Query: 333 KGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
+G K+ M+ YGI+P EHY CV+DLL RAG ++ A E+I MPM P S GALL
Sbjct: 417 EGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGG 476
Query: 393 CRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGA 452
CR++G ELG + L L P SG ++LLSN++AA +W++A VR MK GI K
Sbjct: 477 CRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVP 536
Query: 453 GCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAA-GYIPDTNFALYDVEEEEK 511
G S I +K +H F A D SH + +I L ++ +K+A GY DT L D+EEE+K
Sbjct: 537 GVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDK 596
Query: 512 MTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNR 571
+ HSEK+A+A+GL+ + IRI KNLR+C DCH K IS + GRE+IVRD NR
Sbjct: 597 EHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNR 656
Query: 572 FHRFWDGYCSCSDYW 586
FH F DG CSC D+W
Sbjct: 657 FHHFEDGECSCLDFW 671
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 164/373 (43%), Gaps = 36/373 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG----------QIH------- 43
M + + P+ T+P + KA + + G +H +KSG IH
Sbjct: 157 MLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKD 216
Query: 44 -----DVFVGCSAFDMYSKTGLKD---------DADKMFDEMPERNLATWNAYISNAVLG 89
+F CSA D+ S + D A +FD M R++ +WN I+ +
Sbjct: 217 LGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIC 276
Query: 90 GRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVC 149
G+P A+ F +R G +P T + L+AC+ L G LH ++ + + N V
Sbjct: 277 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 336
Query: 150 NGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVE 209
LVD Y KC ++ LA VF+ + K+ ++W +++ + + Q+F + GVE
Sbjct: 337 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE 396
Query: 210 PKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEI 268
P D ++LSAC+ ++ G+ + ++ +E + ++D+ + G +++A
Sbjct: 397 PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAME 456
Query: 269 AFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
MP E N A++GG G+ ++ + + +++ Y+ L + +A +
Sbjct: 457 LIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKK 516
Query: 328 ---AGAVEKGMKI 337
A V MK+
Sbjct: 517 WDDARKVRNLMKV 529
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/514 (38%), Positives = 296/514 (57%), Gaps = 6/514 (1%)
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL--GRQ 132
NL WN I + P +AI + ++ G P+ TF LNAC C LL+L G++
Sbjct: 31 NLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNAC--CKLLRLCEGQE 88
Query: 133 LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYE 192
LH +V++G D + NGL+ Y C + A V+FD + + + SW +M+ Y QN +
Sbjct: 89 LHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQ 148
Query: 193 EENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSA 252
++ + E V F ++SV+ C + L+LG+ VH+ K V+ ++ +G+A
Sbjct: 149 AVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTA 208
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
LV MY KCGS+ +A F M ER++ W+ +I GYA GH + AL F+ M R + +
Sbjct: 209 LVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMK--RSKII 266
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYE 372
PN VT VLSA S +G VEKG +IF +M +Y I P +HY C+VDL RAG+V A++
Sbjct: 267 PNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHK 326
Query: 373 IIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGR 432
I+ MP+ P + +W LL AC+ +G LG + + KLDP+ N+V +SN++A+ GR
Sbjct: 327 FIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGR 386
Query: 433 WEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKA 492
W VR MK+ KK G S I + +H F + SH + +I ML ++ ++K
Sbjct: 387 WSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQ 446
Query: 493 AGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSA 552
G++ T L+D++EEEK +G HSE++A+A+GL+ P G PIRI KNLR C DCH
Sbjct: 447 VGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEV 506
Query: 553 FKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
K IS + RE+I+RD FH F + CSC+DYW
Sbjct: 507 IKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 2/328 (0%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
ISPN +TF + A L G++LH+ +K+G + + +Y+ G D A
Sbjct: 63 ISPNSYTFGFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYAC 122
Query: 66 KMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCS 125
MFDEMPE + A+W+ +S G+ + ++ D T + + C D
Sbjct: 123 VMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLG 182
Query: 126 LLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLV 185
+L LG+ +H ++ + G +V + LV Y KC + A VF G+ +++ +W M+
Sbjct: 183 VLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIA 242
Query: 186 VYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV-HAVAVKACVE 244
Y + +E Q+F +R + P +SVLSA + +E G + + + +
Sbjct: 243 GYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKIT 302
Query: 245 GNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADMALSSFEE 303
I +VD++ + G + A MP E N+V W ++G G+ + +
Sbjct: 303 PQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRK 362
Query: 304 MTSMRCEAVPNYVTLVCVLSACSRAGAV 331
+ + + NYV + V ++ R +V
Sbjct: 363 ILKLDPSSPENYVFVSNVYASLGRWSSV 390
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M+ E +S + FT + L + GK +H+ K G DV +G + MYSK G
Sbjct: 159 MQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGS 218
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A K+F M ER++ TW+ I+ + G + A+ F ++R+ P+ +TF + L+A
Sbjct: 219 LDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSA 278
Query: 121 CSDCSLLQLGRQL-HGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLA-KVVFDGIIDKNDV 178
S L++ G Q+ + +VD + + VG A K + I+ N V
Sbjct: 279 YSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVV 338
Query: 179 SWCSML 184
W ++L
Sbjct: 339 LWRTLL 344
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 261 GSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVC 320
G + A F+ NL WN II GY+ A++ +++M C PN T
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDM--FLCGISPNSYTFGF 72
Query: 321 VLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMR 380
VL+AC + + +G ++ +S +K G+ ++ L G +D A + EMP
Sbjct: 73 VLNACCKLLRLCEGQEL-HSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMP-E 130
Query: 381 PTISVWGALLNA 392
P + W +++
Sbjct: 131 PDSASWSTMVSG 142
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 323/595 (54%), Gaps = 12/595 (2%)
Query: 1 MRRECISPNDFTFPCLFKASSALHI-PVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTG 59
M E P+ T + A S L + T L D +G + Y+++
Sbjct: 344 MNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSN 403
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLN 119
A FD + ++ +WNA + + R + A+ F + G P + TF L
Sbjct: 404 DLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALT 463
Query: 120 ACS---DCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI--ID 174
AC+ + +G+++ L +G +G+ +V N ++ Y KC + A+ VF+ I
Sbjct: 464 ACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPAR 523
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREG-VEPKDFMISSVLSACARIAGLELGRS 233
++ ++W SML Y + + ++F E V+P +VL A + GR
Sbjct: 524 RDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGRE 583
Query: 234 VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP--ERNLVCWNAIIGGYAHQ 291
+HA V E + + +AL++MY KCGS+ DA+ F+K + +++ W ++I GYA
Sbjct: 584 IHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQY 643
Query: 292 GHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
G A+ AL F M PN+VT + L+AC+ G +E+G ++ MT +GI P +
Sbjct: 644 GQAERALKLFWTMQQQGVR--PNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPAS 701
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
+H++C+VDLLGR G +D A ++++ I+ W ALL+AC+ + E G A+ + +
Sbjct: 702 KHFSCIVDLLGRCGRLDEAEKLLERTSQADVIT-WMALLDACKNSKELERGERCAERIMQ 760
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LDP + ++++L++M+AA GRW EA +RK M D GI+ GCS + V +H F A D
Sbjct: 761 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDK 820
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAI 531
SH ++ EI L +L +KAAGY+ DT L+DV +E K + HSEK+A+AFGL++
Sbjct: 821 SHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMST 880
Query: 532 PPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
P G P+R+ KNLR+C DCH+A K IS + GR++++RD++R+H F G CSC DYW
Sbjct: 881 PSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 190/422 (45%), Gaps = 35/422 (8%)
Query: 6 ISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDAD 65
+ PN L A S L G+++H+ + +G + MYSK G DA
Sbjct: 137 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 196
Query: 66 KMFDEMP---ERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEP-DLITFCAFLNAC 121
+ FD +P +R++ TWNA IS + G + A+ F ++ R G P + +TF + L++C
Sbjct: 197 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSC 256
Query: 122 SDCSLLQLG--RQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVF----DGIIDK 175
+ LL L R +HG +V +G + V LVD YGK + A VF D
Sbjct: 257 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPST 316
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV- 234
+ V+ +M+ QN + ++F EG +P + SVL+AC+ L++G +
Sbjct: 317 SLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSM---LQVGSATA 373
Query: 235 ----HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAH 290
A+ V + N+ G+ L+ Y + + A F+ + ++V WNA+ Y
Sbjct: 374 FVLEQAMEVVSATRDNVL-GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQ 432
Query: 291 QGHADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACS-----RAGAVEKGMKIFYSMTLK 344
+ AL FE M E V P+ T + L+AC+ A A+ K ++ S+ +
Sbjct: 433 HHRSREALVLFERML---LEGVRPSVATFITALTACAAYPPQTASAIGKRIQ---SLLEE 486
Query: 345 YGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEM-PMRPTISVWGALLNACRVYGKPELGR 403
G++ +++ + G + A + + + P R W ++L A YG LG+
Sbjct: 487 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAA---YGHHGLGK 543
Query: 404 IA 405
A
Sbjct: 544 EA 545
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 157/328 (47%), Gaps = 21/328 (6%)
Query: 12 TFPCLFKASSALHIPVTGKQLHALAL-KSGQIHD-VFVGCSAFDMYSKTGLKDDADKMFD 69
T+ CL +A L G++LHA L + +H+ F+ M++K G +A+ + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 70 EMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQL 129
++ + A I + GRP A++ F R P+ A +NACS L
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELF---DRMEVRPNCHALIALVNACSCLGNLAA 159
Query: 130 GRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI--IDKND-VSWCSMLVV 186
GR++H + F+ N + N L+ Y KC + AK FD + K D V+W +M+
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 187 YVQNYEEENGCQMFLTARREGVEPKD-FMISSVLSAC--ARIAGLELGRSVHAVAVKACV 243
+++N Q+F R+G P + SVL +C A + LE R++H V A +
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279
Query: 244 EGNIFVGSALVDMYGKCGSIQDAEIAF----NKMPERNLVCWNAIIGGYAHQGHADMALS 299
E FV +ALVD YGK GS+ DA F ++ P +LV +A+I G +L
Sbjct: 280 EREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLR 339
Query: 300 SFEEMTSMRCEAV-PNYVTLVCVLSACS 326
F +M E P+ VTLV VL+ACS
Sbjct: 340 LF---FAMNLEGTKPSGVTLVSVLNACS 364
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 15/297 (5%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFD 170
T+ L AC L+ G++LH ++ D + + + L+ + KC + A+ + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 171 GIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLEL 230
+ S +M+ ++++ + ++F R V P + ++++AC+ + L
Sbjct: 105 RF--ASVYSCTAMIRAWMEHGRPDKAMELF---DRMEVRPNCHALIALVNACSCLGNLAA 159
Query: 231 GRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP---ERNLVCWNAIIGG 287
GR +H+ E N +G+AL+ MY KCGS+ DA+ AF+++P +R++V WNA+I
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 288 YAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVE-KGMKIFYSMTLKYG 346
+ G A AL F +M PN VT V VL +C AG + + ++ + + G
Sbjct: 220 FLRNGSAREALQLFRDM-DRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEI-IKEMPMRPTISVW--GALLNACRVYGKPE 400
I+ A +VD G+ G +D A+E+ +++ P+ S+ A+++AC G P+
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ 335
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 307/559 (54%), Gaps = 21/559 (3%)
Query: 30 KQLHALALKSGQIHDVFVGCS--AFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAV 87
+Q+H LK+G I D AF +G A +FD + N WN I
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 88 LGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS 147
P+ A+ + ++ + TF L ACS S L+ +Q+H +++ GF +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154
Query: 148 VCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREG 207
N L++ Y K ++ A+++FD + D+ D +F + G
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQV-DQRDT----------------EALNLFHRMQTAG 197
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
++ + + S L ACA + L+ G+ +HA K +E + +G L+DMY KCG +++A
Sbjct: 198 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 257
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F KM E+ + W A+I GYA G AL F +M + E PN +T +L+ACS
Sbjct: 258 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE--PNQMTFTGILTACSH 315
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AG V + +F SM +G KP EHY C+VDLLGRAGL+ A E+I+ MP++P ++WG
Sbjct: 316 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 375
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
ALLNAC ++G ELG+ L ++DP G ++ L+++ AA G W +A VR++MK+ G
Sbjct: 376 ALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQG 435
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+ K GCS ISV H F A D SH + EI ML ++ E ++ GY P L D+E
Sbjct: 436 VSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLE 495
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVR 567
++EK T + HHSEK+A+ FGLI+ PG+ IRI KNLR+C DCH+ K IS + RE+++R
Sbjct: 496 DKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMR 555
Query: 568 DNNRFHRFWDGYCSCSDYW 586
D RFH F DG C+C DYW
Sbjct: 556 DRTRFHLFKDGNCTCGDYW 574
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 33/294 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + N +TFP L KA S++ +Q+HA +K G +++ S ++YSK+G
Sbjct: 109 MLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGD 168
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A +FD++ +R+ A++ F ++ G + D + + L A
Sbjct: 169 IKSARLLFDQVDQRD-----------------TEALNLFHRMQTAGIKLDNVALVSTLQA 211
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C+D +L G+ +H ++ + + + + L+D Y KC ++ A VF + +K W
Sbjct: 212 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 271
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGL--------ELGR 232
+M+ Y + + F+ + GVEP + +L+AC+ AGL E
Sbjct: 272 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH-AGLVHEAKLLFESME 330
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPER-NLVCWNAII 285
+H K +E +VD+ G+ G +++AE MP + N W A++
Sbjct: 331 RIH--GFKPSIEHY----GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 378
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 30/335 (8%)
Query: 118 LNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGL--AKVVFDGIIDK 175
L+ CS ++ RQ+HG ++++G + + L+ F N L A+ VFD I
Sbjct: 22 LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 176 NDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVH 235
N W +M+ Y + E E ++ V + +L AC+ ++ LE + +H
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIH 141
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHAD 295
A +K I+ ++L+++Y K G I+ A + F+++ +R+
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD-----------------T 184
Query: 296 MALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYA 355
AL+ F M + + + V LV L AC+ G +++G K ++ K+ I+
Sbjct: 185 EALNLFHRMQTAGIKL--DNVALVSTLQACADLGVLDQG-KWIHAYIKKHEIEIDPILGC 241
Query: 356 CVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPN 415
++D+ + G ++ A E+ ++M + +SVW A+++ ++G+ GR A + K+
Sbjct: 242 VLIDMYAKCGDLEEAIEVFRKMEEK-GVSVWTAMISGYAIHGR---GREALEWFMKMQTA 297
Query: 416 D-SGNHVLLSNMFAA---TGRWEEADLVRKEMKDV 446
N + + + A G EA L+ + M+ +
Sbjct: 298 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 332
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 312/560 (55%), Gaps = 34/560 (6%)
Query: 42 IHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFIN 101
+ D V + + GL D+A ++ + PERN+ +W + I+ GRP +A+ F
Sbjct: 166 VKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNC 225
Query: 102 LRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNE 161
+ G EPD + L+ACS L+ GR LH + + + L+D Y KC +
Sbjct: 226 MLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGD 285
Query: 162 VGLAKVVFDG------------IID--------------------KNDVSWCSMLVVYVQ 189
+ A+ VFD IID ++ +++ SM+ Y+
Sbjct: 286 IAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIH 345
Query: 190 NYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFV 249
+ + Q+F+ RR G+ +F + S+L+ACA + L GR++HA + VE ++++
Sbjct: 346 SGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYL 405
Query: 250 GSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC 309
+ALVDMY KCG + +A F++M ER++ W+A+I G A G AL SF +M R
Sbjct: 406 VTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMK--RD 463
Query: 310 EAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDR 369
P VT + VL+ACS + + +G + F M + + P EHY C++DLL R+GL+D
Sbjct: 464 GFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDE 523
Query: 370 AYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAA 429
A +++ MPM+P +W ++L+ACRV+ +L R AA++L KL P + +V L N++
Sbjct: 524 AMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYID 583
Query: 430 TGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREE 489
+ +W EA +R M++ G+KK AG S I+V ++H F D SH EI M+ ++
Sbjct: 584 SRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARR 643
Query: 490 MKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDC 549
+K+AGY P T+ DV+EEEK + HSEKIA+AFGLI++PP +PI I KNLR+C DC
Sbjct: 644 LKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDC 703
Query: 550 HSAFKFISGIVGREVIVRDN 569
HSA K IS + RE+IVRD
Sbjct: 704 HSAIKLISQLWNREIIVRDR 723
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 135/344 (39%), Gaps = 72/344 (20%)
Query: 113 TFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVS-VCNGLVDFYGKCNEVGLAKVVFD- 170
TF C+ + L R LH +R+ V N L+ Y A+ FD
Sbjct: 104 TFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDE 163
Query: 171 -------------------GIID-----------KNDVSWCSMLVVYVQNYEEENGCQMF 200
G++D +N VSW S++ Y + + F
Sbjct: 164 VPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCF 223
Query: 201 LTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKC 260
+GVEP + + LSAC+++ LE GR +H + K ++ + L+DMY KC
Sbjct: 224 NCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKC 283
Query: 261 GSIQDAEIAFN-----KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRC----EA 311
G I A+ F+ + PE WN II GY GH D+A S F++M +
Sbjct: 284 GDIAQAQAVFDAVGRGQKPEP----WNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSM 339
Query: 312 VPNYV-------------------------TLVCVLSACSRAGAVEKGMKIFYSMTLKYG 346
+ Y+ T+V +L+AC+ GA+ +G + S+ +
Sbjct: 340 ITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI- 398
Query: 347 IKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALL 390
++ +VD+ + G VD A + M R + W A++
Sbjct: 399 VEEDVYLVTALVDMYMKCGRVDEATAVFHRMGER-DVHTWSAMI 441
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
+RR + ++FT L A ++L G+ LHA + DV++ + DMY K G
Sbjct: 359 LRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGR 418
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
D+A +F M ER++ TW+A I+ G +A+++F ++R G +P +T+ A L A
Sbjct: 419 VDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTA 478
Query: 121 CSDCSLLQLGRQ 132
CS SLL GRQ
Sbjct: 479 CSHSSLLNEGRQ 490
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Query: 213 FMISSVLSACARIAGLELGRSVHAVAVKACVEGNI-FVGSALVDMYGKCGSIQDAEIAFN 271
F V CA AG L R +HA ++ + V + L+ MY G DA AF+
Sbjct: 103 FTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFD 162
Query: 272 KMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAV 331
++P ++ V W +IGG G D A + N V+ +++ SRAG
Sbjct: 163 EVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPER------NVVSWTSLIAGYSRAGRP 216
Query: 332 EKGMKIFYSMTLKYGIKP 349
+ F M L G++P
Sbjct: 217 ADAVYCFNCM-LSDGVEP 233
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/607 (37%), Positives = 329/607 (54%), Gaps = 51/607 (8%)
Query: 28 TGKQLHALALKSGQIH---DVFVGCSAFDMYSKTGLKDDADKMFDEMP--ERNLATWNAY 82
TGK+LHA+ L SG + F+ + +Y+ G+ A +F ++P +++ W
Sbjct: 33 TGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDVTDWTTL 92
Query: 83 ISNAVL-GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSG 141
+++ V G +P F +R+ G D + + C+ L +GRQ G LV+ G
Sbjct: 93 LTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMG 152
Query: 142 FDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMF- 200
V VCN +++ Y KC V + VF + ++N VSW ++L V+ ENG +F
Sbjct: 153 LGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFD 212
Query: 201 -LTAR------------------REGVEPKDFMI------------SSVLSACARIAGLE 229
+ R REG D M+ SS+LSACA+ +
Sbjct: 213 EMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVL 272
Query: 230 LGRSVHAVAVKAC-VEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGY 288
+GR VH A+K E +I VG+ALVDMY KCG I A F +P+RN+V WNA++GG
Sbjct: 273 MGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGL 332
Query: 289 AHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIK 348
A G L F +M EA P+ +T + VLSACS +G V++G F S+ +YG
Sbjct: 333 AMHGRGKFVLDIFPKMIE---EAKPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTT 389
Query: 349 PGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADN 408
P EHYAC+VD+LGRAG ++ A +IK+MPM P V G+LL +C +GK +LG
Sbjct: 390 PKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQE 449
Query: 409 LFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQA 468
L ++D +++ HVLLSNM+ G+ ++A+ +R+ +K GI+K G S I V IH F A
Sbjct: 450 LIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSA 509
Query: 469 KDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALY---------DVEEEEKMTEVGHHS 519
D SH EI L + + ++ AGY+P+T ++ E EEK + HS
Sbjct: 510 GDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPGSDGREGSSEEMEEKEQALFLHS 569
Query: 520 EKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGY 579
EK+A+ FG I+ PG P+ I KNLRIC DCHSA K +S I RE+++RD NRFH F G
Sbjct: 570 EKLAVCFGHISTKPGAPLYIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGS 629
Query: 580 CSCSDYW 586
CSCSDYW
Sbjct: 630 CSCSDYW 636
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 46/344 (13%)
Query: 114 FCAFLNACSDCSLLQLGRQLHGFLVRSGFDG---NVSVCNGLVDFYGKCNEVGLAKVVFD 170
F + L +C+ S L G++LH ++ SG N + N L Y C A+ +F
Sbjct: 18 FRSLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFY 77
Query: 171 GI--IDKNDVSWCSMLVVYVQN-YEEENGCQMFLTARREGVEPKDFMISSVLSACARIAG 227
I K+ W ++L VQ+ + G F R+EGV D + SV C R+
Sbjct: 78 QIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVED 137
Query: 228 LELGRSVHAVAVKACVEGNIFVGSALVDMYGKCG-------------------------- 261
L +GR VK + + V +A+++MY KCG
Sbjct: 138 LGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEG 197
Query: 262 -----SIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYV 316
+++ + F++MPERN V W +I GY G + +EM +R N+V
Sbjct: 198 VVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMV-LRFRLGLNFV 256
Query: 317 TLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKE 376
TL +LSAC+++G V G + G + +VD+ + G +D A+++ K
Sbjct: 257 TLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKY 316
Query: 377 MPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL----DPND 416
+P R ++ W A+L ++G+ G+ D K+ P+D
Sbjct: 317 LPKRNVVA-WNAMLGGLAMHGR---GKFVLDIFPKMIEEAKPDD 356
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 146/355 (41%), Gaps = 40/355 (11%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR+E + +D +F + + G+Q +K G V V + +MY K GL
Sbjct: 113 MRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGL 172
Query: 61 KDDADKMFDEMPERNLATWNAYISNAV--------------------------LGGRPKN 94
++ ++F EM ERN+ +W+ + V + G N
Sbjct: 173 VEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGN 232
Query: 95 A--------IDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRS-GFDGN 145
+D + R G + +T + L+AC+ + +GR +H + ++ G + +
Sbjct: 233 GFSREGFLLLDEMVLRFRLG--LNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMH 290
Query: 146 VSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARR 205
+ V LVD Y KC + +A VF + +N V+W +ML + + +F
Sbjct: 291 IMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIE 350
Query: 206 EGVEPKDFMISSVLSACARIAGLELG-RSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQ 264
E +P D +VLSAC+ ++ G ++ + I + +VD+ G+ G ++
Sbjct: 351 EA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLE 409
Query: 265 DAEIAFNKMPE-RNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
+A + KMP N V +++G G + +E+ M +V L
Sbjct: 410 EAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLL 464
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 325/618 (52%), Gaps = 35/618 (5%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M RE IS + +T + A + L G+ + A + G DV V S +++K G
Sbjct: 39 MVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGC 98
Query: 61 KDDADKMFDEMPE------------------------------RNLATWNAYISNAVLGG 90
++A+ +F M +++ +WNA I+ L G
Sbjct: 99 LEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYG 158
Query: 91 RPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCN 150
K+A F + G PD+ TF + L AC+ L+ GR LH + GFD + ++ N
Sbjct: 159 HDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQN 218
Query: 151 GLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEP 210
L+ Y +C + A+ F I K +W +ML Y Q + ++ ++ EG P
Sbjct: 219 NLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTP 278
Query: 211 KDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAF 270
F SSV+ +CA + L G+ +H + E ++ +G+ALV+MY KCGS+ DA+ +F
Sbjct: 279 DRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSF 338
Query: 271 NKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP-NYVTLVCVLSACSRAG 329
+ + +++V W+A+I A GHA+ AL E M + + N VT VL ACS G
Sbjct: 339 DGISNKDVVSWSAMIAASAQHGHAEEAL---ELSHLMNLQGIAQNEVTASSVLHACSHGG 395
Query: 330 AVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGAL 389
+ +G+ F ++ +GI+ E+ +DLLGRAG + A ++ MP + + L
Sbjct: 396 RLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTL 455
Query: 390 LNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIK 449
L C+V+G G+ + L+P + G++VLL+NM+AA GRW++ +R+ M+ G+K
Sbjct: 456 LGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVK 515
Query: 450 KGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK-AAGYIPDTNFALYDVEE 508
+ GCS I +++I+ F DTS+ RN EI+A L +L MK GY+PDT +DV +
Sbjct: 516 RQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSD 575
Query: 509 EEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRD 568
++K + HSEK+A+ FGLI PPG +RI KNLR+C DCH+ K S I GR +IVRD
Sbjct: 576 DKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRD 635
Query: 569 NNRFHRFWDGYCSCSDYW 586
RFH F G CSC DYW
Sbjct: 636 GTRFHHFEGGICSCGDYW 653
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 34/367 (9%)
Query: 64 ADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSD 123
A ++FD + +RN +W+ + V + A++ + + R D T + L AC+
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 124 CSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI----------- 172
++ GR + GF+ +V V L+ + KC + A+ VF +
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 173 ------------------IDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDF 213
+D DV SW +M+ Y +++ +F G P +
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
SS+L ACA LE GR +H + + + + L+ MY +CGS++ A F +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
++ L WN ++ YA AL ++ M + P+ T V+ +C+ GA+ +
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNM--LLEGFTPDRFTFSSVVDSCASLGALRE 298
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNAC 393
G K + + G + +V++ + G + A + + + +S W A++ A
Sbjct: 299 G-KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAAS 356
Query: 394 RVYGKPE 400
+G E
Sbjct: 357 AQHGHAE 363
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 303/561 (54%), Gaps = 14/561 (2%)
Query: 29 GKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERNLATWNAYISNAVL 88
G+Q+HA +++G + + +MY K G A ++FD+M + W +
Sbjct: 201 GRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQ 260
Query: 89 GGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSV 148
GR ++A+ F++L G E D F L AC+ L+ G+Q+H + + G + VSV
Sbjct: 261 AGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSV 320
Query: 149 CNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQMFLTAR-REG 207
LVDFY KC+ A F I + NDVSW +++ Y Q + E + F + R +
Sbjct: 321 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 380
Query: 208 VEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAE 267
V F +S+ AC+ +A +G VHA A+K + G+ + SAL+ MY KCG + DA
Sbjct: 381 VVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAH 440
Query: 268 IAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSR 327
F M ++V W A I G+A+ G+A AL FE+M S C PN VT + VL+ACS
Sbjct: 441 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS--CGMKPNSVTFIAVLTACSH 498
Query: 328 AGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWG 387
AG VE+G +M KY + P +HY C++D+ R+GL+D A +K MP P W
Sbjct: 499 AGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWK 558
Query: 388 ALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVG 447
L+ C + ELG+IA + L +LDP D+ +VL N++ G+WEEA V K M +
Sbjct: 559 CFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERM 618
Query: 448 IKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVE 507
+KK CSWI K +IH F D H ++ EI L + G++ F E
Sbjct: 619 LKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFD------GFMEGDMFQCSMTE 672
Query: 508 EEEKMTEVGHHSEKIALAFGLIAIPPG--VPIRITKNLRICGDCHSAFKFISGIVGREVI 565
E++ + HSE++A+AFGLI++ PI++ KNLR C DCH K +S + G E++
Sbjct: 673 RREQLLD---HSERLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIV 729
Query: 566 VRDNNRFHRFWDGYCSCSDYW 586
+RD+ RFH F +G CSC+DYW
Sbjct: 730 IRDSRRFHHFKEGKCSCNDYW 750
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 191/397 (48%), Gaps = 3/397 (0%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M + +S + +++ CLF+A L G+ LH + V + MY + G
Sbjct: 72 MDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGS 131
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
+DADK+FDEM + N + IS G A+ F + +G +P + L +
Sbjct: 132 LEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKS 191
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
+ L +GRQ+H ++R+G N S+ G+V+ Y KC + AK VFD + K V+W
Sbjct: 192 LVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAW 251
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
++V Y Q + ++F+ EGVE F+ S VL ACA + L G+ +HA K
Sbjct: 252 TGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAK 311
Query: 241 ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSS 300
+E + VG+ LVD Y KC S + A AF ++ E N V W+AII GY + A+ +
Sbjct: 312 LGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKT 371
Query: 301 FEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDL 360
F+ + S + V N T + ACS G ++ ++ +K + + ++ +
Sbjct: 372 FKSLRS-KNAVVLNSFTYTSIFQACSVLADCNIGGQV-HADAIKRSLIGSQYGESALITM 429
Query: 361 LGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYG 397
+ G +D A+E+ + M P I W A ++ YG
Sbjct: 430 YSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAYYG 465
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 80 NAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVR 139
N ++ + G+ A + F + + G L ++ AC + L GR LH +
Sbjct: 50 NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRM 109
Query: 140 SGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQM 199
+ +V + N ++ Y +C + A +FD + D N VS +M+ Y + + +
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGL 169
Query: 200 FLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGK 259
F G +P M +++L + L++GR +HA ++A + N + + +V+MY K
Sbjct: 170 FSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVK 229
Query: 260 CGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLV 319
CG + A+ F++M + V W ++ GY G A AL F ++ + E +
Sbjct: 230 CGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEW--DSFVFS 287
Query: 320 CVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVD---RAYEIIKE 376
VL AC+ + G +I ++ K G++ +VD + + RA++ I+E
Sbjct: 288 VVLKACASLEELRFGKQI-HACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIRE 346
Query: 377 MPMRPTISVWGALLN 391
P W A+++
Sbjct: 347 ----PNDVSWSAIIS 357
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 9 NDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMF 68
N FT+ +F+A S L G Q+HA A+K I + + MYSK G DDA ++F
Sbjct: 384 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVF 443
Query: 69 DEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQ 128
+ M ++ W A+IS G A+ F + G +P+ +TF A L ACS L++
Sbjct: 444 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 503
Query: 129 LGRQ-LHGFLVRSGFDGNVSVCNGLVDFYGK 158
G+ L L + + + ++D Y +
Sbjct: 504 QGKHYLDTMLRKYNVAPTIDHYDCMIDIYAR 534
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 326/596 (54%), Gaps = 42/596 (7%)
Query: 30 KQLHALALKSGQIHDVFVGCSAFDMY--SKTGLKDDADKMFDEMPERNLATWNAYI-SNA 86
KQ HA + +G I + S G A ++FD++P+ ++ +N I ++A
Sbjct: 32 KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHA 91
Query: 87 VLGGRPKNAIDAFINLRRTGG-EPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGN 145
V+ N++ F+++ R G P+ TF AC + + G Q+ ++ G + N
Sbjct: 92 VIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESN 151
Query: 146 VSVCNGLVDFYGK-------------------------------CNEVGLAKVVFDGIID 174
+ V N ++ Y E+G AK +FD + +
Sbjct: 152 LFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSE 211
Query: 175 KNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSV 234
++ VSW +++ YVQ + +F + G P +F ++S L+ACA + L+ GR +
Sbjct: 212 RDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWI 271
Query: 235 HAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCW--NAIIGGYAHQG 292
H K+ ++ N + ++L+DMY KCG I A F+ L W NA+IGGYA G
Sbjct: 272 HVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHG 331
Query: 293 HADMALSSFEEMTSMRCEAV-PNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGA 351
+ A+ FE+M + E V PN VT V +L+ACS VE+G F SM YGI+P
Sbjct: 332 KSKEAIDLFEQM---KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEI 388
Query: 352 EHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFK 411
EHY C+VDLLGR+GL+ A E + MPM P ++WGALL ACR++ E G+ + +
Sbjct: 389 EHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKE 448
Query: 412 LDPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDT 471
LD + G HVLL+N+++A+G+W+EA VR++++ G KK GCS I + H F D
Sbjct: 449 LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDR 508
Query: 472 SHERNTEIQAMLTKLREEMKAAGYIPDTNFALYDV-EEEEKMTEVGHHSEKIALAFGLIA 530
SH + ++ L ++ ++K AGY+P+ L D+ +EE+K T + HSEK+A+AFGLI
Sbjct: 509 SHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLIN 568
Query: 531 IPPGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PPG IRI KNLR+C DCH A KFIS + RE+IVRD R+H F DG+CSC DYW
Sbjct: 569 TPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 8 PNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADK- 66
PN +TF +FKA + G+Q+ A+K G ++FV + MY+ GL D+A +
Sbjct: 115 PNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRV 174
Query: 67 ------------------------------MFDEMPERNLATWNAYISNAVLGGRPKNAI 96
MFDEM ER++ +W I+ V G K A+
Sbjct: 175 FDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEAL 234
Query: 97 DAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFY 156
D F + +TG P+ T + L AC++ L GR +H ++ +S N + L+D Y
Sbjct: 235 DLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMY 294
Query: 157 GKCNEVGLAKVVF-DGIIDKNDV-SWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFM 214
KC E+ A VF D K V W +M+ Y + + + +F + E V P
Sbjct: 295 AKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVT 354
Query: 215 ISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
++L+AC+ +E GR ++A +E I +VD+ G+ G +++AE M
Sbjct: 355 FVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNM 414
Query: 274 P-ERNLVCWNAIIGG 287
P + W A++G
Sbjct: 415 PMAPDATIWGALLGA 429
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/534 (38%), Positives = 316/534 (59%), Gaps = 17/534 (3%)
Query: 62 DDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL--RRTGG--EPDLITFCAF 117
+D+ +FDE+P+R++ +W + I+ V R ++A+ F L +G D + +
Sbjct: 30 NDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSV 89
Query: 118 LNACSDCSLLQLGRQ-----LHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGI 172
L C + +LG + +HG +++ GF+ V V N L+D Y K E+G+AKV FDG+
Sbjct: 90 LLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAKV-FDGM 148
Query: 173 IDKNDVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGR 232
+ + W S++ Y QN +F + G +F ++V+ L+LG+
Sbjct: 149 NESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG----NFRYNAVIMDXGLSGALQLGK 204
Query: 233 SVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQG 292
+H +K +E ++FVG+++VD+Y KC ++ A AF+ M +N+ W A++ GY G
Sbjct: 205 CIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHG 264
Query: 293 HADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAE 352
A A+ F +M +R PNY+T V VL+ACS AG +++G F M ++ ++PG E
Sbjct: 265 RAKEAMEIFYKM--IRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIE 322
Query: 353 HYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKL 412
HY C+VDLLGRAG + Y +IKEM +P +WG+LL ACR++ ELG I+A LF+L
Sbjct: 323 HYLCMVDLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFEL 381
Query: 413 DPNDSGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTS 472
D ++ G +VLLSN++A GRW+E + +R MK G+ K G S + +K RIH+ D
Sbjct: 382 DXSNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKE 441
Query: 473 HERNTEIQAMLTKLREEMKAAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIP 532
H ++ +I L K +++ GY+P+ N L+DV+EEEK + HSEK+A+AFG++
Sbjct: 442 HPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSV 501
Query: 533 PGVPIRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
PG I I KNLRICGDC+ K I +V RE++VRD+ RFH F +G CSC DYW
Sbjct: 502 PGSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 7/325 (2%)
Query: 15 CLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPER 74
C+ A S L + +H L +K G V VG + D Y+K G A K+FD M E
Sbjct: 93 CVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNES 151
Query: 75 NLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLH 134
+ WN+ I+ G A F ++ ++G + A + LQLG+ +H
Sbjct: 152 DHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSGN----FRYNAVIMDXGLSGALQLGKCIH 207
Query: 135 GFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEE 194
+++ + +V V +VD Y KC V +A+ FD + KN SW +M+ Y + +
Sbjct: 208 HQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAK 267
Query: 195 NGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VHAVAVKACVEGNIFVGSAL 253
++F R GV+P SVL+AC+ L+ G + + + VE I +
Sbjct: 268 EAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCM 327
Query: 254 VDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVP 313
VD+ G+ G + + + + + W +++G + ++ S ++ +
Sbjct: 328 VDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCG 387
Query: 314 NYVTLVCVLSACSRAGAVEKGMKIF 338
YV L + + R VE+ M+I
Sbjct: 388 YYVLLSNIYADAGRWDEVER-MRIL 411
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 325/567 (57%), Gaps = 10/567 (1%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +ASS+ P K++HA+ +++G + + G A ++FDEMP+
Sbjct: 16 LLRASSSK--PKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPR 73
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+ WN V P ++ + +R G PD T+ + A S +L G LH
Sbjct: 74 IFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHA 133
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
++++GF+ V LV Y K E+ A+ +F+ + K+ V+W + + V VQ
Sbjct: 134 HVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAI 193
Query: 196 GCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVD 255
+ F + V+ F + S+LSAC ++ L++G ++ A K +E NI V +A +D
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLD 253
Query: 256 MYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV-PN 314
M+ KCGS + A + F+ M +RN+V W+ +I GYA G + AL+ F T M+ E + PN
Sbjct: 254 MHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALF---TMMQNEGLRPN 310
Query: 315 YVTLVCVLSACSRAGAVEKGMKIFYSMTLKYG---IKPGAEHYACVVDLLGRAGLVDRAY 371
YVT + VLSACS AG V +G K ++S+ ++ ++P EHYAC+VDLLGR+GL++ AY
Sbjct: 311 YVTFLGVLSACSHAGLVNEG-KRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATG 431
E IK+M + P +WGALL AC V+ LG+ AD L + P+ HVLLSN++AA G
Sbjct: 370 EFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429
Query: 432 RWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMK 491
+W+ D VR +M+ +G KK A S + +IH F D SH ++ I L ++ ++++
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIR 489
Query: 492 AAGYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHS 551
GY+PDT +DVE EEK + + HHSEK+A+AFGLI G PIR+ KNLR C DCH
Sbjct: 490 NMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHV 549
Query: 552 AFKFISGIVGREVIVRDNNRFHRFWDG 578
KF+S + RE+I+RD NRFH F +G
Sbjct: 550 FSKFVSRLTSREIIMRDKNRFHHFRNG 576
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 12/341 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
MR + P++FT+P + KA S L + G LHA LK+G V MY K G
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGE 159
Query: 61 KDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNA 120
A+ +F+ M ++L WNA+I+ V G A++ F + + D T + L+A
Sbjct: 160 LSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 121 CSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSW 180
C L +G +++ + + N+ V N +D + KC A+V+FD + +N VSW
Sbjct: 220 CGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSW 279
Query: 181 CSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVK 240
+M+V Y N + +F + EG+ P VLSAC+ + G+ ++ V+
Sbjct: 280 STMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVR 339
Query: 241 ---ACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHADM 296
+E + +VD+ G+ G +++A KM E + W A++G A H DM
Sbjct: 340 LNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACA--VHRDM 397
Query: 297 ALSSFEEMTSMRCEAVPN----YVTLVCVLSACSRAGAVEK 333
L +++ + E P+ +V L + +A + V+K
Sbjct: 398 ILG--QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/568 (37%), Positives = 311/568 (54%), Gaps = 28/568 (4%)
Query: 23 LHIPVTGKQLHALALKSGQIHDVFVGCSAFD--MYSKTGLK--DDADKMFDEMPERNLAT 78
+H T QLH + + +H++F + S LK D A +F NL
Sbjct: 47 IHASNTLPQLHQIHAQIF-LHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFV 105
Query: 79 WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHGFLV 138
+NA I R + ++ F+ + R PD +T L + + + LGR LHG ++
Sbjct: 106 FNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVM 165
Query: 139 RSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEENGCQ 198
+ G + + V LVD Y K E+G +FD +N S+L+
Sbjct: 166 KLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAE--SILL------------- 210
Query: 199 MFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYG 258
GV P D + S L AC +I L++G +H + N +G+ALVDMY
Sbjct: 211 ------WNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYA 264
Query: 259 KCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTL 318
KCG+I+ A F + ++L+ W+ +I G+A G D AL F +M S P+ V
Sbjct: 265 KCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGIN--PDEVIF 322
Query: 319 VCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMP 378
+ +L+ACS +G V++G+ F SM L Y I+P +HY +VDLLGRAG +D A I+ MP
Sbjct: 323 LAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMP 382
Query: 379 MRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPNDSGNHVLLSNMFAATGRWEEADL 438
+ P +WGAL ACR + E+ + A+ L +L+P G++V LSN++AA GRWE+ +
Sbjct: 383 INPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVER 442
Query: 439 VRKEMKDVGIKKGAGCSWISVKNRIHIFQAKDTSHERNTEIQAMLTKLREEMKAAGYIPD 498
VR MK+ G++K G S+I V+ ++H F A D +H R EI L ++ K GY+P+
Sbjct: 443 VRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPE 502
Query: 499 TNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHSAFKFISG 558
T + L+++EEEEK +G HSEK+ALAFGLI+ PG IRI KNLR+CGDCHS K+ S
Sbjct: 503 TAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASK 562
Query: 559 IVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+ RE+I+RD RFH F DG CSC DYW
Sbjct: 563 LSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 31/339 (9%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGL 60
M R I P+ T P + K+ +AL G+ LH +K G D FV S DMY K G
Sbjct: 129 MLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGE 188
Query: 61 KDDADKMFDEMPERNLAT----WNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCA 116
++FDE P+RN A WN G P+ +T +
Sbjct: 189 LGFGLQLFDESPQRNKAESILLWN-------------------------GVRPNDLTVVS 223
Query: 117 FLNACSDCSLLQLGRQLHGFLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
L AC+ LQ+G ++H +L +GF N + LVD Y KC + A VF K+
Sbjct: 224 ALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKD 283
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRS-VH 235
++W M+ + + + Q F+ + G+ P + + ++L+AC+ ++ G +
Sbjct: 284 LLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFE 343
Query: 236 AVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMP-ERNLVCWNAIIGGYAHQGHA 294
++ + +E + + +VD+ G+ G + +A MP + V W A+ +
Sbjct: 344 SMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNI 403
Query: 295 DMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
+MA + E++ + + +YV L V +A R VE+
Sbjct: 404 EMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVER 442
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 329/600 (54%), Gaps = 19/600 (3%)
Query: 1 MRRECISPNDFTFPCLFKASSALHIPVTGKQLHALALKSG-QIHDVFVGCSAFDMYSKTG 59
MR SPN+FT KA G Q+H + +++G + HDV V S MYSK
Sbjct: 292 MRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV-VANSLVVMYSKGR 348
Query: 60 LKDDADKMFDEMPERNLATWNAYISNAVLGGRPKNAIDAFINL-RRTGGEPDLITFCAFL 118
DA ++FD +P RNLATWN+ IS G+ ++++ F + RR +PD TF + L
Sbjct: 349 WTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 408
Query: 119 NACSDCSLLQLGRQLHGFLVRSGFD--GNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKN 176
ACS + G Q+H + G N + L+D Y KC+ + +A VFDG+ +N
Sbjct: 409 KACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRN 468
Query: 177 DVSWCSMLVVYVQNYEEENGCQMFLTARREGVEPKDFMISSVLSACARIAGLELGRSVHA 236
+ W +++V + Q + + +F GV ++SSV++ A A +E G+ VH
Sbjct: 469 AIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHC 528
Query: 237 VAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADM 296
K ++ V ++LVDMY KCG +A F +MP RN+V W A+I G GH
Sbjct: 529 YTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGRE 588
Query: 297 ALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEKGMKIFYSMTLKYGIKPGAEHYAC 356
A+ FEEM + EA + V + +LSACS +G V++ + F + ++P AEHYAC
Sbjct: 589 AIDLFEEMQAEGVEA--DEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 646
Query: 357 VVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNACRVYGKPELGRIAADNLFKLDPND 416
+VDLLGRAG + A E+I MPM PT+ VW LL+ACRV+ +GR D L +D ++
Sbjct: 647 MVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDN 706
Query: 417 SGNHVLLSNMFAATGRWEEADLVRKEMKDVGIKKGAGCSWISVKNRIHIFQ-AKDTSHER 475
N+V+LSN+ A G W E +R M+ G++K GCSW V +H F D +H +
Sbjct: 707 PVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQ 766
Query: 476 NTEIQAMLTKLREEMKAA-GYIPDTNFALYDVEEEEKMTEVGHHSEKIALAFGLIAIPPG 534
+I+ L ++ M+ GY D AL+DV+EE ++ + HSE++A+ L+ G
Sbjct: 767 AGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTG 826
Query: 535 VP--------IRITKNLRICGDCHSAFKFISGIVGREVIVRDNNRFHRFWDGYCSCSDYW 586
+R+ KNLR+CGDCH K +S +V R V+VRD NRFHRF +G CSC DYW
Sbjct: 827 DDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 189/396 (47%), Gaps = 14/396 (3%)
Query: 16 LFKASSALHIPVTGKQLHALALKSGQIHDVFVGCSAFDMYSKTGLKDDADKMFDEMPERN 75
L +AS+ G QLHA +K G D + + DMY+K G A ++FD MPERN
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 265
Query: 76 LATWNAYISNAVLGGRPKNAIDAFINLRRTGGEPDLITFCAFLNACSDCSLLQLGRQLHG 135
+ +W A + + G + + F +R +G P+ T A L AC + + G Q+HG
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIHG 323
Query: 136 FLVRSGFDGNVSVCNGLVDFYGKCNEVGLAKVVFDGIIDKNDVSWCSMLVVYVQNYEEEN 195
VR+GF+G+ V N LV Y K G A+ VFD I +N +W SM+ Y + +
Sbjct: 324 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 383
Query: 196 GCQMFL-TARREGVEPKDFMISSVLSACARIAGLELGRSVH-AVAVKACVEG-NIFVGSA 252
+F RR +P +F +S+L AC+ + G VH A+AV+ N + A
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 443
Query: 253 LVDMYGKCGSIQDAEIAFNKMPERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAV 312
L+D+Y KC + A F+ + RN + W +I G+A +G A+ F S A
Sbjct: 444 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 503
Query: 313 PNYVTLVCVLSACSRAGAVEKGMKIF-YSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAY 371
+ L V++ + VE+G ++ Y+ G+ + +VD+ + GL A
Sbjct: 504 GH--VLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDMYLKCGLTGEAG 559
Query: 372 EIIKEMPMRPTISVWGALLNACRVYGKPELGRIAAD 407
+EMP R +S W A++N GK GR A D
Sbjct: 560 RRFREMPARNVVS-WTAMINGV---GKHGHGREAID 591
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 214 MISSVLSACARIAGLELGRSVHAVAVKACVEGNIFVGSALVDMYGKCGSIQDAEIAFNKM 273
MI+ +L A AR + L G +HA +K + + + L+DMY KCG + A F+ M
Sbjct: 202 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 261
Query: 274 PERNLVCWNAIIGGYAHQGHADMALSSFEEMTSMRCEAVPNYVTLVCVLSACSRAGAVEK 333
PERN+V W A++ G+ H G A L F EM PN TL L AC G
Sbjct: 262 PERNVVSWTALMVGFLHHGEARECLRLFGEMRG--SGTSPNEFTLSATLKAC--GGGTRA 317
Query: 334 GMKIFYSMTLKYGIKPGAEHYACVVDLLGRAGLVDRAYEIIKEMPMRPTISVWGALLNA 392
G++I + + ++ G + +V + + A + +P R ++ W ++++
Sbjct: 318 GVQI-HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSR-NLATWNSMISG 374
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,373,276,998
Number of Sequences: 23463169
Number of extensions: 395294247
Number of successful extensions: 922854
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7107
Number of HSP's successfully gapped in prelim test: 3586
Number of HSP's that attempted gapping in prelim test: 796915
Number of HSP's gapped (non-prelim): 48790
length of query: 586
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 438
effective length of database: 8,886,646,355
effective search space: 3892351103490
effective search space used: 3892351103490
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)