Query 007882
Match_columns 586
No_of_seqs 452 out of 4031
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 12:50:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 1.2E-62 4E-67 518.9 47.5 440 94-547 2-466 (481)
2 2b5e_A Protein disulfide-isome 100.0 3E-62 1E-66 518.3 33.3 437 92-548 13-473 (504)
3 3apo_A DNAJ homolog subfamily 100.0 8.2E-46 2.8E-50 412.9 42.2 417 91-542 114-656 (780)
4 3uem_A Protein disulfide-isome 100.0 1.2E-43 4.1E-48 359.8 36.7 340 199-544 15-359 (361)
5 3us3_A Calsequestrin-1; calciu 100.0 1.7E-43 5.8E-48 357.2 34.7 326 87-421 6-354 (367)
6 2r2j_A Thioredoxin domain-cont 100.0 9.5E-44 3.2E-48 361.9 24.7 352 93-456 5-376 (382)
7 1sji_A Calsequestrin 2, calseq 100.0 5.4E-42 1.8E-46 345.2 34.9 316 93-419 11-350 (350)
8 3apo_A DNAJ homolog subfamily 100.0 2.1E-35 7.1E-40 329.1 33.7 316 93-542 440-767 (780)
9 3idv_A Protein disulfide-isome 100.0 1.8E-30 6.2E-35 247.5 26.0 223 92-544 14-239 (241)
10 3ed3_A Protein disulfide-isome 100.0 3.5E-29 1.2E-33 244.2 23.4 221 90-314 14-279 (298)
11 2h8l_A Protein disulfide-isome 99.9 1.2E-26 4.1E-31 221.6 18.0 230 197-436 2-251 (252)
12 3ec3_A Protein disulfide-isome 99.9 2.1E-26 7E-31 219.5 19.0 229 198-436 3-249 (250)
13 4f9z_D Endoplasmic reticulum r 99.9 1.8E-23 6.2E-28 196.2 20.0 212 201-417 9-227 (227)
14 1a8l_A Protein disulfide oxido 99.9 1.4E-23 4.9E-28 197.5 16.8 88 451-541 133-225 (226)
15 2ywm_A Glutaredoxin-like prote 99.9 1.3E-22 4.5E-27 191.2 16.6 95 101-196 9-111 (229)
16 3q6o_A Sulfhydryl oxidase 1; p 99.9 4.2E-21 1.4E-25 182.5 24.9 205 92-301 11-237 (244)
17 3zzx_A Thioredoxin; oxidoreduc 99.9 9.2E-21 3.1E-25 153.7 13.7 98 96-198 3-104 (105)
18 2dj1_A Protein disulfide-isome 99.8 4.4E-20 1.5E-24 159.5 15.3 114 91-204 15-128 (140)
19 3h79_A Thioredoxin-like protei 99.8 4.9E-20 1.7E-24 156.2 15.1 107 92-198 14-126 (127)
20 3t58_A Sulfhydryl oxidase 1; o 99.8 7.8E-19 2.7E-23 182.9 26.0 206 92-301 11-237 (519)
21 2qsi_A Putative hydrogenase ex 99.8 5.6E-20 1.9E-24 153.1 12.9 106 91-199 13-122 (137)
22 2av4_A Thioredoxin-like protei 99.8 6.7E-20 2.3E-24 154.7 11.6 102 95-199 23-138 (160)
23 2voc_A Thioredoxin; electron t 99.8 2.1E-19 7.2E-24 148.6 14.0 104 95-202 3-107 (112)
24 2qgv_A Hydrogenase-1 operon pr 99.8 4.8E-20 1.6E-24 154.2 9.8 107 94-203 18-128 (140)
25 3gnj_A Thioredoxin domain prot 99.8 3.2E-19 1.1E-23 147.3 14.5 105 93-200 4-110 (111)
26 3tco_A Thioredoxin (TRXA-1); d 99.8 3.8E-19 1.3E-23 146.3 14.9 104 93-199 4-108 (109)
27 1x5e_A Thioredoxin domain cont 99.8 4.2E-19 1.4E-23 150.2 14.5 112 92-207 6-117 (126)
28 3die_A Thioredoxin, TRX; elect 99.8 6E-19 2.1E-23 144.3 14.5 103 93-199 3-106 (106)
29 3uvt_A Thioredoxin domain-cont 99.8 5.4E-19 1.8E-23 145.9 14.2 105 93-198 5-110 (111)
30 2trx_A Thioredoxin; electron t 99.8 7.2E-19 2.5E-23 144.4 14.7 104 93-199 2-107 (108)
31 1mek_A Protein disulfide isome 99.8 1.4E-19 4.9E-24 151.6 10.7 110 93-202 7-119 (120)
32 1nsw_A Thioredoxin, TRX; therm 99.8 5.4E-19 1.8E-23 144.3 13.5 102 95-199 2-104 (105)
33 1x5d_A Protein disulfide-isome 99.8 9.1E-19 3.1E-23 149.7 15.1 110 91-200 5-117 (133)
34 2ppt_A Thioredoxin-2; thiredox 99.8 9.1E-19 3.1E-23 153.4 15.0 107 92-201 46-153 (155)
35 3qfa_C Thioredoxin; protein-pr 99.8 4.5E-19 1.6E-23 147.4 12.3 101 94-199 13-116 (116)
36 2yzu_A Thioredoxin; redox prot 99.8 1.2E-18 4E-23 143.3 14.5 105 94-201 2-107 (109)
37 3hz4_A Thioredoxin; NYSGXRC, P 99.8 8.1E-19 2.8E-23 151.3 13.9 108 91-201 4-113 (140)
38 2l5l_A Thioredoxin; structural 99.8 1.3E-18 4.5E-23 149.2 15.0 109 91-202 7-128 (136)
39 3apq_A DNAJ homolog subfamily 99.8 6.6E-19 2.3E-23 163.2 13.6 115 91-208 95-210 (210)
40 3p2a_A Thioredoxin 2, putative 99.8 1.5E-18 5.2E-23 151.2 15.0 107 92-201 37-144 (148)
41 2i4a_A Thioredoxin; acidophIle 99.8 2.4E-18 8.1E-23 140.9 15.2 103 93-198 2-106 (107)
42 3f3q_A Thioredoxin-1; His TAG, 99.8 1.9E-18 6.4E-23 142.0 14.2 100 95-199 9-109 (109)
43 3h79_A Thioredoxin-like protei 99.8 9.8E-19 3.3E-23 148.1 12.5 109 432-541 14-127 (127)
44 3ga4_A Dolichyl-diphosphooligo 99.8 2.2E-18 7.4E-23 151.3 15.0 112 92-203 17-156 (178)
45 1w4v_A Thioredoxin, mitochondr 99.8 2.2E-18 7.5E-23 144.1 14.2 110 88-200 8-119 (119)
46 3hxs_A Thioredoxin, TRXP; elec 99.8 1.5E-18 5.1E-23 150.0 13.6 107 91-200 20-139 (141)
47 2e0q_A Thioredoxin; electron t 99.8 2.7E-18 9.2E-23 139.7 14.3 102 95-200 1-103 (104)
48 2o8v_B Thioredoxin 1; disulfid 99.8 1.3E-18 4.6E-23 147.2 12.9 104 93-199 22-127 (128)
49 1dby_A Chloroplast thioredoxin 99.8 2.9E-18 9.8E-23 140.5 14.4 103 94-199 2-106 (107)
50 4euy_A Uncharacterized protein 99.8 3.9E-19 1.3E-23 145.1 8.9 97 99-199 7-104 (105)
51 1t00_A Thioredoxin, TRX; redox 99.8 3.4E-18 1.2E-22 141.3 14.6 104 94-200 6-111 (112)
52 1thx_A Thioredoxin, thioredoxi 99.8 4.2E-18 1.4E-22 141.5 15.2 105 93-200 7-113 (115)
53 2pu9_C TRX-F, thioredoxin F-ty 99.8 4E-18 1.4E-22 140.6 14.7 104 91-199 3-110 (111)
54 2dml_A Protein disulfide-isome 99.8 1.6E-18 5.4E-23 147.5 12.4 106 92-200 16-124 (130)
55 1gh2_A Thioredoxin-like protei 99.8 3.7E-18 1.3E-22 139.8 14.1 101 95-200 3-107 (107)
56 1r26_A Thioredoxin; redox-acti 99.8 3.8E-18 1.3E-22 143.6 14.1 101 95-200 21-123 (125)
57 1ep7_A Thioredoxin CH1, H-type 99.8 5.7E-18 2E-22 139.9 14.6 103 94-200 3-111 (112)
58 1syr_A Thioredoxin; SGPP, stru 99.8 5.3E-18 1.8E-22 140.1 14.2 103 92-199 8-111 (112)
59 3aps_A DNAJ homolog subfamily 99.8 2.3E-18 7.9E-23 144.7 11.6 106 93-201 3-114 (122)
60 3uem_A Protein disulfide-isome 99.8 1.1E-15 3.7E-20 154.2 33.3 301 92-413 16-355 (361)
61 1sji_A Calsequestrin 2, calseq 99.8 1.8E-16 6.3E-21 158.9 27.4 305 203-543 13-347 (350)
62 1fb6_A Thioredoxin M; electron 99.8 7.3E-18 2.5E-22 137.5 14.0 102 95-199 2-105 (105)
63 3d6i_A Monothiol glutaredoxin- 99.8 7.3E-18 2.5E-22 139.3 14.1 102 95-199 2-108 (112)
64 1xwb_A Thioredoxin; dimerizati 99.8 1.3E-17 4.5E-22 136.2 15.2 101 95-199 2-106 (106)
65 2djj_A PDI, protein disulfide- 99.8 6.7E-18 2.3E-22 141.7 13.0 114 429-544 3-119 (121)
66 2i1u_A Thioredoxin, TRX, MPT46 99.8 7.6E-18 2.6E-22 141.3 13.1 107 91-200 10-118 (121)
67 3gix_A Thioredoxin-like protei 99.8 6.1E-18 2.1E-22 147.0 12.9 99 98-199 9-120 (149)
68 3qou_A Protein YBBN; thioredox 99.8 6.6E-18 2.3E-22 164.8 14.7 107 92-201 6-115 (287)
69 3m9j_A Thioredoxin; oxidoreduc 99.8 1.3E-17 4.4E-22 136.0 13.8 96 99-199 7-105 (105)
70 3dxb_A Thioredoxin N-terminall 99.8 8.3E-18 2.8E-22 157.1 14.2 112 88-202 7-120 (222)
71 1xfl_A Thioredoxin H1; AT3G510 99.7 2.2E-17 7.5E-22 138.9 15.2 103 92-199 15-123 (124)
72 3ul3_B Thioredoxin, thioredoxi 99.7 3E-18 1E-22 145.2 10.0 95 100-197 32-127 (128)
73 1faa_A Thioredoxin F; electron 99.7 2.1E-17 7.1E-22 139.3 15.0 103 92-199 17-123 (124)
74 3zzx_A Thioredoxin; oxidoreduc 99.7 3E-18 1E-22 138.9 9.0 94 440-540 8-104 (105)
75 2xc2_A Thioredoxinn; oxidoredu 99.7 1.4E-17 4.9E-22 138.7 13.3 100 94-199 14-117 (117)
76 2vlu_A Thioredoxin, thioredoxi 99.7 2.4E-17 8.3E-22 138.4 14.6 103 93-200 13-120 (122)
77 2djj_A PDI, protein disulfide- 99.7 4E-18 1.4E-22 143.1 9.5 108 91-201 5-118 (121)
78 2vim_A Thioredoxin, TRX; thior 99.7 2.9E-17 9.8E-22 133.7 14.3 99 96-199 2-104 (104)
79 2hls_A Protein disulfide oxido 99.7 2.7E-17 9.3E-22 155.3 16.1 193 324-547 27-231 (243)
80 2l6c_A Thioredoxin; oxidoreduc 99.7 6.4E-18 2.2E-22 139.0 10.3 101 96-201 6-107 (110)
81 2wz9_A Glutaredoxin-3; protein 99.7 2.4E-17 8.1E-22 144.3 14.4 105 93-202 12-120 (153)
82 2oe3_A Thioredoxin-3; electron 99.7 1.8E-17 6.3E-22 137.1 13.0 94 99-197 19-113 (114)
83 1oaz_A Thioredoxin 1; immune s 99.7 3.4E-18 1.2E-22 143.5 8.5 104 93-199 3-122 (123)
84 3us3_A Calsequestrin-1; calciu 99.7 4.2E-16 1.4E-20 156.9 25.1 311 203-546 15-352 (367)
85 3emx_A Thioredoxin; structural 99.7 7.2E-18 2.5E-22 144.2 10.4 104 92-202 15-128 (135)
86 1v98_A Thioredoxin; oxidoreduc 99.7 2.5E-17 8.6E-22 142.0 13.9 106 93-201 33-139 (140)
87 3idv_A Protein disulfide-isome 99.7 2.2E-17 7.5E-22 156.7 14.9 111 93-203 130-240 (241)
88 2dj3_A Protein disulfide-isome 99.7 3.1E-18 1.1E-22 146.4 8.0 111 92-203 6-121 (133)
89 1zma_A Bacterocin transport ac 99.7 5.6E-18 1.9E-22 141.4 9.1 101 93-196 12-117 (118)
90 2l57_A Uncharacterized protein 99.7 1E-17 3.5E-22 141.6 10.2 95 105-202 21-119 (126)
91 3ga4_A Dolichyl-diphosphooligo 99.7 2.4E-17 8.3E-22 144.7 12.9 124 433-556 18-167 (178)
92 3bj5_A Protein disulfide-isome 99.7 1E-17 3.4E-22 144.3 10.1 134 297-431 6-143 (147)
93 2j23_A Thioredoxin; immune pro 99.7 3.6E-17 1.2E-21 137.0 13.3 104 93-199 15-120 (121)
94 2es7_A Q8ZP25_salty, putative 99.7 4.3E-18 1.5E-22 145.9 7.1 111 94-208 18-133 (142)
95 3d22_A TRXH4, thioredoxin H-ty 99.7 6.8E-17 2.3E-21 139.1 14.5 105 92-201 23-133 (139)
96 3evi_A Phosducin-like protein 99.7 3E-17 1E-21 135.4 11.6 98 94-198 4-112 (118)
97 2qsi_A Putative hydrogenase ex 99.7 1E-17 3.4E-22 139.5 8.7 104 433-541 15-122 (137)
98 2dj3_A Protein disulfide-isome 99.7 4.5E-17 1.5E-21 139.1 13.0 113 431-544 5-120 (133)
99 1qgv_A Spliceosomal protein U5 99.7 2.8E-17 9.6E-22 141.5 11.7 98 99-199 10-120 (142)
100 2dj0_A Thioredoxin-related tra 99.7 3E-18 1E-22 147.2 5.3 103 93-197 7-118 (137)
101 2vm1_A Thioredoxin, thioredoxi 99.7 1.1E-16 3.9E-21 133.4 14.4 104 93-201 6-115 (118)
102 3evi_A Phosducin-like protein 99.7 3E-17 1E-21 135.4 10.6 104 433-543 3-115 (118)
103 1ti3_A Thioredoxin H, PTTRXH1; 99.7 9.2E-17 3.1E-21 132.8 13.1 102 93-199 4-111 (113)
104 2av4_A Thioredoxin-like protei 99.7 3.4E-17 1.2E-21 138.2 10.1 105 435-541 23-138 (160)
105 2f51_A Thioredoxin; electron t 99.7 1.8E-16 6.1E-21 132.0 13.7 104 94-202 4-115 (118)
106 2trx_A Thioredoxin; electron t 99.7 1.2E-16 4.1E-21 130.9 11.2 104 433-541 2-107 (108)
107 2c0g_A ERP29 homolog, windbeut 99.7 3.9E-16 1.3E-20 145.7 15.3 107 90-201 13-133 (248)
108 3cxg_A Putative thioredoxin; m 99.7 2.2E-16 7.4E-21 134.5 12.2 104 91-200 18-129 (133)
109 3gnj_A Thioredoxin domain prot 99.7 8.9E-17 3E-21 132.5 9.5 104 433-541 4-109 (111)
110 2qgv_A Hydrogenase-1 operon pr 99.7 1.8E-17 6.3E-22 138.5 4.9 103 434-542 18-125 (140)
111 2o8v_B Thioredoxin 1; disulfid 99.7 2.7E-16 9.3E-21 132.9 11.5 104 433-541 22-127 (128)
112 2dbc_A PDCL2, unnamed protein 99.7 2.8E-16 9.7E-21 134.1 11.5 100 93-199 10-120 (135)
113 3uvt_A Thioredoxin domain-cont 99.7 2.1E-16 7.3E-21 130.1 10.5 104 433-541 5-111 (111)
114 2i4a_A Thioredoxin; acidophIle 99.7 3.5E-16 1.2E-20 127.9 11.7 104 433-541 2-107 (107)
115 2dbc_A PDCL2, unnamed protein 99.7 7.7E-16 2.6E-20 131.4 13.3 107 432-545 9-124 (135)
116 2kuc_A Putative disulphide-iso 99.7 3.3E-16 1.1E-20 133.1 10.9 104 96-202 9-123 (130)
117 1x5d_A Protein disulfide-isome 99.7 2.5E-16 8.5E-21 134.4 9.8 109 432-543 6-118 (133)
118 2dj1_A Protein disulfide-isome 99.7 4.6E-16 1.6E-20 134.0 11.6 110 432-546 16-128 (140)
119 2voc_A Thioredoxin; electron t 99.7 4.1E-16 1.4E-20 128.7 10.4 103 435-544 3-107 (112)
120 3fk8_A Disulphide isomerase; A 99.6 7.5E-16 2.6E-20 131.4 11.8 92 105-199 24-132 (133)
121 1w4v_A Thioredoxin, mitochondr 99.6 2.5E-16 8.4E-21 131.5 8.6 106 431-541 11-118 (119)
122 1t00_A Thioredoxin, TRX; redox 99.6 3.5E-16 1.2E-20 129.1 9.3 104 433-541 5-110 (112)
123 1a8l_A Protein disulfide oxido 99.6 8.4E-16 2.9E-20 144.2 13.1 105 95-199 118-225 (226)
124 2qc7_A ERP31, ERP28, endoplasm 99.6 1.9E-15 6.6E-20 140.6 15.2 102 93-199 5-118 (240)
125 3f8u_A Protein disulfide-isome 99.6 9.6E-14 3.3E-18 145.6 29.9 307 93-419 110-465 (481)
126 4euy_A Uncharacterized protein 99.6 3.2E-16 1.1E-20 127.7 8.3 96 439-541 7-104 (105)
127 2l5l_A Thioredoxin; structural 99.6 1E-15 3.5E-20 131.1 11.8 112 432-549 8-133 (136)
128 3die_A Thioredoxin, TRX; elect 99.6 4.8E-16 1.6E-20 126.8 9.4 101 434-541 4-106 (106)
129 2djk_A PDI, protein disulfide- 99.6 9.9E-16 3.4E-20 130.3 11.5 127 302-431 3-131 (133)
130 3tco_A Thioredoxin (TRXA-1); d 99.6 4.9E-16 1.7E-20 127.5 9.3 103 433-541 4-108 (109)
131 1mek_A Protein disulfide isome 99.6 6.3E-16 2.1E-20 129.2 9.9 110 432-543 6-118 (120)
132 2fwh_A Thiol:disulfide interch 99.6 5.8E-16 2E-20 132.2 9.8 99 98-200 17-128 (134)
133 3dxb_A Thioredoxin N-terminall 99.6 3.2E-16 1.1E-20 146.2 8.9 112 429-545 8-121 (222)
134 2i1u_A Thioredoxin, TRX, MPT46 99.6 6E-16 2.1E-20 129.6 9.5 106 432-542 11-118 (121)
135 1fb6_A Thioredoxin M; electron 99.6 9.2E-16 3.2E-20 124.9 10.3 101 435-540 2-104 (105)
136 3qfa_C Thioredoxin; protein-pr 99.6 3.2E-16 1.1E-20 130.1 7.6 103 432-541 11-116 (116)
137 2yj7_A LPBCA thioredoxin; oxid 99.4 2E-17 6.7E-22 135.1 0.0 101 95-198 3-105 (106)
138 2dml_A Protein disulfide-isome 99.6 6.2E-16 2.1E-20 131.4 9.3 107 432-542 16-124 (130)
139 2ppt_A Thioredoxin-2; thiredox 99.6 6.6E-16 2.3E-20 135.1 9.6 105 432-542 46-152 (155)
140 3iv4_A Putative oxidoreductase 99.6 2E-15 7E-20 120.2 11.4 97 94-195 7-111 (112)
141 1thx_A Thioredoxin, thioredoxi 99.6 8E-16 2.7E-20 127.6 9.5 105 433-542 7-113 (115)
142 1dby_A Chloroplast thioredoxin 99.6 6E-16 2.1E-20 126.5 8.6 103 434-541 2-106 (107)
143 1a0r_P Phosducin, MEKA, PP33; 99.6 2E-16 6.8E-21 147.6 6.3 134 407-544 87-228 (245)
144 2pu9_C TRX-F, thioredoxin F-ty 99.6 1.3E-15 4.3E-20 125.5 10.5 103 432-541 4-110 (111)
145 3hz4_A Thioredoxin; NYSGXRC, P 99.6 3.7E-16 1.3E-20 134.5 7.5 106 432-542 5-112 (140)
146 3p2a_A Thioredoxin 2, putative 99.6 1.1E-15 3.8E-20 133.0 10.3 106 432-543 37-144 (148)
147 2trc_P Phosducin, MEKA, PP33; 99.6 1.6E-16 5.4E-21 146.6 5.0 132 405-543 72-214 (217)
148 2yzu_A Thioredoxin; redox prot 99.6 1.6E-15 5.4E-20 124.3 10.2 103 434-542 2-106 (109)
149 3aps_A DNAJ homolog subfamily 99.6 8E-16 2.7E-20 129.1 8.4 105 433-542 3-113 (122)
150 1wou_A Thioredoxin -related pr 99.6 2E-15 6.8E-20 126.7 10.7 100 94-197 6-122 (123)
151 1fo5_A Thioredoxin; disulfide 99.6 1E-15 3.6E-20 119.2 8.3 83 111-199 3-85 (85)
152 1nsw_A Thioredoxin, TRX; therm 99.6 1.2E-15 4E-20 124.3 8.8 101 435-541 2-104 (105)
153 1a0r_P Phosducin, MEKA, PP33; 99.6 1.4E-15 5E-20 141.8 10.2 128 65-199 86-225 (245)
154 3ed3_A Protein disulfide-isome 99.6 1.6E-15 5.3E-20 147.7 10.8 112 431-544 15-144 (298)
155 2trc_P Phosducin, MEKA, PP33; 99.6 7.7E-16 2.6E-20 142.0 8.0 102 92-198 98-211 (217)
156 3hxs_A Thioredoxin, TRXP; elec 99.6 1.4E-15 4.7E-20 131.2 9.1 107 432-543 21-140 (141)
157 1x5e_A Thioredoxin domain cont 99.6 2.5E-15 8.6E-20 126.8 10.4 104 432-543 6-111 (126)
158 1gh2_A Thioredoxin-like protei 99.6 2.6E-15 8.8E-20 122.7 10.1 100 435-541 3-106 (107)
159 2e0q_A Thioredoxin; electron t 99.6 2E-15 6.9E-20 122.5 9.2 101 435-542 1-103 (104)
160 1r26_A Thioredoxin; redox-acti 99.6 2.6E-15 8.9E-20 126.2 10.1 102 432-541 18-122 (125)
161 3f3q_A Thioredoxin-1; His TAG, 99.6 1.8E-15 6.1E-20 124.0 8.9 100 434-541 8-109 (109)
162 1oaz_A Thioredoxin 1; immune s 99.6 1.1E-15 3.6E-20 128.2 7.5 104 433-541 3-122 (123)
163 1nho_A Probable thioredoxin; b 99.6 1.2E-15 4E-20 118.9 7.1 82 112-199 3-84 (85)
164 3qcp_A QSOX from trypanosoma b 99.6 2.4E-16 8.1E-21 159.4 3.6 107 92-199 22-138 (470)
165 3gix_A Thioredoxin-like protei 99.6 2.5E-15 8.6E-20 130.4 9.2 99 438-541 9-120 (149)
166 2vlu_A Thioredoxin, thioredoxi 99.6 3.6E-15 1.2E-19 125.0 9.3 104 432-542 12-120 (122)
167 1xwb_A Thioredoxin; dimerizati 99.6 6.2E-15 2.1E-19 120.1 10.4 101 435-541 2-106 (106)
168 2djk_A PDI, protein disulfide- 99.6 3.8E-15 1.3E-19 126.7 9.4 105 95-203 8-118 (133)
169 2hls_A Protein disulfide oxido 99.6 5.9E-14 2E-18 132.4 18.6 194 100-304 14-226 (243)
170 1wmj_A Thioredoxin H-type; str 99.6 2.8E-16 9.7E-21 133.5 2.1 105 93-202 14-124 (130)
171 2r2j_A Thioredoxin domain-cont 99.6 3.3E-13 1.1E-17 136.8 25.0 305 203-545 7-332 (382)
172 1faa_A Thioredoxin F; electron 99.6 7.2E-15 2.5E-19 123.6 10.6 103 432-541 17-123 (124)
173 1ep7_A Thioredoxin CH1, H-type 99.6 4.2E-15 1.4E-19 122.5 8.8 103 433-541 2-110 (112)
174 3ul3_B Thioredoxin, thioredoxi 99.6 3.3E-15 1.1E-19 126.4 8.4 92 444-540 35-128 (128)
175 3d6i_A Monothiol glutaredoxin- 99.6 4.8E-15 1.7E-19 122.2 9.1 102 435-541 2-108 (112)
176 3f9u_A Putative exported cytoc 99.6 3.3E-15 1.1E-19 133.6 8.7 99 98-199 31-165 (172)
177 1xfl_A Thioredoxin H1; AT3G510 99.6 1.1E-14 3.7E-19 122.3 10.9 103 432-541 15-123 (124)
178 1syr_A Thioredoxin; SGPP, stru 99.6 5.5E-15 1.9E-19 121.8 8.8 102 432-541 8-111 (112)
179 3qou_A Protein YBBN; thioredox 99.6 6.8E-15 2.3E-19 143.3 11.0 105 432-541 6-113 (287)
180 2xc2_A Thioredoxinn; oxidoredu 99.6 6.1E-15 2.1E-19 122.6 9.0 100 434-541 14-117 (117)
181 1v98_A Thioredoxin; oxidoreduc 99.6 6.2E-15 2.1E-19 126.8 9.3 104 433-542 33-138 (140)
182 2b5e_A Protein disulfide-isome 99.6 1E-14 3.4E-19 153.9 12.5 114 88-203 353-470 (504)
183 2ju5_A Thioredoxin disulfide i 99.6 2E-14 6.9E-19 125.7 12.3 96 101-200 38-152 (154)
184 3apq_A DNAJ homolog subfamily 99.6 6.6E-15 2.3E-19 136.1 9.7 107 432-544 96-204 (210)
185 1zma_A Bacterocin transport ac 99.6 3.4E-15 1.2E-19 124.3 6.9 99 434-538 13-117 (118)
186 2oe3_A Thioredoxin-3; electron 99.6 5.2E-15 1.8E-19 122.2 7.6 99 433-539 12-113 (114)
187 2vim_A Thioredoxin, TRX; thior 99.6 1.2E-14 4.2E-19 117.9 9.6 99 436-541 2-104 (104)
188 2dj0_A Thioredoxin-related tra 99.6 9.1E-16 3.1E-20 131.6 2.6 103 433-539 7-118 (137)
189 3m9j_A Thioredoxin; oxidoreduc 99.6 1.4E-14 4.7E-19 117.9 9.6 96 439-541 7-105 (105)
190 2l6c_A Thioredoxin; oxidoreduc 99.5 5.8E-15 2E-19 121.2 7.3 100 435-542 5-106 (110)
191 3kp8_A Vkorc1/thioredoxin doma 99.5 3.3E-15 1.1E-19 121.0 5.7 77 109-198 11-93 (106)
192 2wz9_A Glutaredoxin-3; protein 99.5 3.5E-14 1.2E-18 124.1 11.9 108 432-546 11-122 (153)
193 2ywm_A Glutaredoxin-like prote 99.5 1.7E-14 5.9E-19 135.5 10.7 101 94-200 119-220 (229)
194 3q6o_A Sulfhydryl oxidase 1; p 99.5 2.7E-14 9.1E-19 135.4 11.9 112 432-544 11-129 (244)
195 1lu4_A Soluble secreted antige 99.5 2.4E-14 8.2E-19 122.4 10.3 88 108-199 22-135 (136)
196 1qgv_A Spliceosomal protein U5 99.5 3.4E-14 1.2E-18 122.1 10.5 101 439-541 10-120 (142)
197 1zzo_A RV1677; thioredoxin fol 99.5 4.3E-14 1.5E-18 120.8 11.1 102 95-200 10-135 (136)
198 2b5x_A YKUV protein, TRXY; thi 99.5 1.1E-13 3.9E-18 120.1 13.9 103 96-201 15-146 (148)
199 3emx_A Thioredoxin; structural 99.5 6.4E-15 2.2E-19 125.8 5.5 103 432-544 15-128 (135)
200 2lst_A Thioredoxin; structural 99.3 8.4E-16 2.9E-20 130.5 0.0 98 101-201 10-117 (130)
201 2f51_A Thioredoxin; electron t 99.5 2E-14 6.7E-19 119.6 8.2 103 434-543 4-114 (118)
202 2h30_A Thioredoxin, peptide me 99.5 4.2E-14 1.4E-18 125.3 10.6 105 94-200 22-156 (164)
203 3d22_A TRXH4, thioredoxin H-ty 99.5 3.4E-14 1.2E-18 122.1 9.3 104 432-542 23-132 (139)
204 2l57_A Uncharacterized protein 99.5 2.9E-14 1E-18 120.2 8.6 92 448-544 23-119 (126)
205 1z6n_A Hypothetical protein PA 99.5 3.3E-14 1.1E-18 125.0 8.8 87 98-188 41-132 (167)
206 2j23_A Thioredoxin; immune pro 99.5 2.2E-14 7.6E-19 119.9 7.3 104 432-541 14-120 (121)
207 2es7_A Q8ZP25_salty, putative 99.5 1.3E-14 4.4E-19 124.2 5.9 104 434-544 18-127 (142)
208 1sen_A Thioredoxin-like protei 99.5 8.1E-15 2.8E-19 129.5 4.7 96 101-199 37-147 (164)
209 2vm1_A Thioredoxin, thioredoxi 99.5 4.4E-14 1.5E-18 117.5 8.6 103 433-542 6-114 (118)
210 3raz_A Thioredoxin-related pro 99.5 1.2E-13 4E-18 120.5 11.7 92 109-202 23-142 (151)
211 1ti3_A Thioredoxin H, PTTRXH1; 99.5 3.4E-14 1.1E-18 117.2 7.7 102 433-541 4-111 (113)
212 3or5_A Thiol:disulfide interch 99.5 1.9E-13 6.5E-18 121.1 13.0 103 97-201 21-152 (165)
213 3dml_A Putative uncharacterize 99.5 3.9E-14 1.3E-18 114.7 7.4 90 109-199 17-109 (116)
214 3lor_A Thiol-disulfide isomera 99.5 2.8E-13 9.6E-18 119.4 13.3 101 99-201 19-156 (160)
215 2f9s_A Thiol-disulfide oxidore 99.5 1.9E-13 6.5E-18 119.2 11.8 92 109-202 25-140 (151)
216 2c0g_A ERP29 homolog, windbeut 99.5 1.1E-13 3.6E-18 129.3 10.7 104 432-542 15-132 (248)
217 1ilo_A Conserved hypothetical 99.5 1.3E-13 4.5E-18 104.9 9.5 74 113-195 2-76 (77)
218 2yj7_A LPBCA thioredoxin; oxid 99.2 3.2E-15 1.1E-19 121.8 0.0 101 435-540 3-105 (106)
219 3cxg_A Putative thioredoxin; m 99.5 4E-14 1.4E-18 120.4 6.5 103 432-542 19-129 (133)
220 3eyt_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 118.7 12.4 91 109-201 27-153 (158)
221 4f9z_D Endoplasmic reticulum r 99.5 5E-12 1.7E-16 118.1 20.8 196 94-302 10-223 (227)
222 2lja_A Putative thiol-disulfid 99.5 2.4E-13 8.4E-18 118.6 10.9 92 109-202 29-145 (152)
223 2qc7_A ERP31, ERP28, endoplasm 99.4 4.1E-13 1.4E-17 124.9 12.1 103 433-541 5-118 (240)
224 3ira_A Conserved protein; meth 99.4 2.2E-13 7.6E-18 119.6 9.5 81 97-180 26-118 (173)
225 3erw_A Sporulation thiol-disul 99.4 5.7E-13 2E-17 115.1 11.2 85 109-195 33-144 (145)
226 3hcz_A Possible thiol-disulfid 99.4 3E-13 1E-17 117.3 9.3 88 109-198 30-144 (148)
227 3qcp_A QSOX from trypanosoma b 99.4 4.5E-14 1.6E-18 142.8 4.3 101 432-533 22-131 (470)
228 2lrn_A Thiol:disulfide interch 99.4 6E-13 2.1E-17 116.1 10.8 87 109-200 28-141 (152)
229 3ph9_A Anterior gradient prote 99.4 1.1E-13 3.8E-18 119.1 5.9 96 101-199 35-144 (151)
230 4evm_A Thioredoxin family prot 99.4 5.8E-13 2E-17 113.8 10.3 87 109-198 21-137 (138)
231 3fkf_A Thiol-disulfide oxidore 99.4 5.7E-13 2E-17 115.6 10.4 88 109-200 32-146 (148)
232 3ewl_A Uncharacterized conserv 99.4 4.7E-13 1.6E-17 115.3 9.8 87 109-199 26-140 (142)
233 2l5o_A Putative thioredoxin; s 99.4 9.8E-13 3.4E-17 114.9 11.8 91 109-201 27-142 (153)
234 3t58_A Sulfhydryl oxidase 1; o 99.4 6.4E-13 2.2E-17 138.4 12.3 113 432-544 11-129 (519)
235 2lrt_A Uncharacterized protein 99.4 1.7E-12 5.7E-17 113.2 13.1 84 109-194 34-142 (152)
236 3gl3_A Putative thiol:disulfid 99.4 1.9E-12 6.6E-17 112.8 13.2 92 109-202 27-144 (152)
237 2kuc_A Putative disulphide-iso 99.4 2.7E-13 9.3E-18 114.9 7.0 103 437-544 10-123 (130)
238 3lwa_A Secreted thiol-disulfid 99.4 1.5E-12 5.2E-17 117.5 12.3 91 109-199 58-180 (183)
239 3hdc_A Thioredoxin family prot 99.4 2.3E-12 7.9E-17 113.2 12.9 91 109-201 40-153 (158)
240 3ia1_A THIO-disulfide isomeras 99.4 8.4E-13 2.9E-17 115.4 10.0 87 111-202 31-146 (154)
241 3eur_A Uncharacterized protein 99.4 9.8E-13 3.4E-17 113.3 9.9 83 109-196 30-141 (142)
242 3dml_A Putative uncharacterize 99.4 9E-14 3.1E-18 112.6 3.0 89 450-541 17-109 (116)
243 2fwh_A Thiol:disulfide interch 99.4 4.7E-13 1.6E-17 114.0 7.6 100 439-542 18-128 (134)
244 3ha9_A Uncharacterized thiored 99.4 1.5E-12 5.1E-17 115.3 11.0 87 109-200 36-164 (165)
245 1wou_A Thioredoxin -related pr 99.4 6.7E-13 2.3E-17 111.1 7.7 99 435-539 7-122 (123)
246 2fgx_A Putative thioredoxin; N 99.4 1E-12 3.5E-17 104.9 8.1 77 112-195 30-106 (107)
247 1wmj_A Thioredoxin H-type; str 99.4 8.6E-14 2.9E-18 118.0 1.9 105 432-543 13-123 (130)
248 3f9u_A Putative exported cytoc 99.4 6.4E-13 2.2E-17 118.6 7.5 100 437-541 30-165 (172)
249 2b1k_A Thiol:disulfide interch 99.4 1.6E-12 5.4E-17 115.6 9.6 86 108-199 49-159 (168)
250 3fw2_A Thiol-disulfide oxidore 99.4 4.9E-12 1.7E-16 110.0 12.4 87 109-199 32-147 (150)
251 3kcm_A Thioredoxin family prot 99.4 3.4E-12 1.2E-16 111.5 11.3 91 109-201 27-144 (154)
252 1ttz_A Conserved hypothetical 99.4 1.2E-12 4.1E-17 101.0 7.3 74 114-199 3-76 (87)
253 3iv4_A Putative oxidoreductase 99.4 6.3E-13 2.2E-17 105.8 5.7 98 433-537 6-111 (112)
254 1i5g_A Tryparedoxin II; electr 99.4 2.2E-12 7.4E-17 111.4 9.5 87 95-182 13-125 (144)
255 3kh7_A Thiol:disulfide interch 99.3 3.2E-12 1.1E-16 114.4 10.3 86 108-199 56-166 (176)
256 3s9f_A Tryparedoxin; thioredox 99.3 3.1E-12 1.1E-16 113.1 10.0 73 109-182 47-145 (165)
257 3fk8_A Disulphide isomerase; A 99.3 1E-12 3.6E-17 111.7 6.6 87 449-540 27-131 (133)
258 1fo5_A Thioredoxin; disulfide 99.3 2E-12 6.8E-17 100.3 7.5 81 452-541 3-85 (85)
259 1kng_A Thiol:disulfide interch 99.3 2.2E-12 7.6E-17 113.0 8.6 86 109-199 41-151 (156)
260 1o8x_A Tryparedoxin, TRYX, TXN 99.3 3.4E-12 1.2E-16 110.4 9.6 72 109-181 27-124 (146)
261 1nho_A Probable thioredoxin; b 99.3 2.1E-12 7.3E-17 100.2 7.2 80 453-541 3-84 (85)
262 1jfu_A Thiol:disulfide interch 99.3 1.4E-11 4.7E-16 111.4 12.6 92 109-202 59-182 (186)
263 1o73_A Tryparedoxin; electron 99.3 4.8E-12 1.6E-16 109.2 9.1 74 109-183 27-126 (144)
264 4fo5_A Thioredoxin-like protei 99.3 5.8E-12 2E-16 108.5 9.5 84 109-196 31-141 (143)
265 2hyx_A Protein DIPZ; thioredox 99.3 1.1E-11 3.8E-16 122.3 11.7 89 109-199 81-198 (352)
266 2ywi_A Hypothetical conserved 99.3 1.2E-11 4.2E-16 112.8 10.3 91 109-201 44-175 (196)
267 3ph9_A Anterior gradient prote 99.3 6.4E-12 2.2E-16 108.1 7.6 95 442-541 32-144 (151)
268 1sen_A Thioredoxin-like protei 99.3 6.3E-12 2.1E-16 110.8 7.4 90 449-541 44-147 (164)
269 2lus_A Thioredoxion; CR-Trp16, 98.9 5E-13 1.7E-17 115.2 0.0 79 109-187 24-129 (143)
270 2cvb_A Probable thiol-disulfid 99.3 1.9E-11 6.5E-16 110.7 10.5 91 109-202 32-161 (188)
271 2ju5_A Thioredoxin disulfide i 99.2 1E-11 3.5E-16 108.3 7.8 96 441-542 34-152 (154)
272 3kp8_A Vkorc1/thioredoxin doma 99.2 1.8E-12 6.2E-17 104.8 2.1 76 451-540 12-93 (106)
273 2rli_A SCO2 protein homolog, m 99.2 4.6E-11 1.6E-15 106.3 11.2 92 109-200 25-164 (171)
274 1ilo_A Conserved hypothetical 99.2 1.5E-11 5E-16 93.4 6.3 74 454-537 2-76 (77)
275 3u5r_E Uncharacterized protein 99.2 5.2E-11 1.8E-15 110.4 11.2 91 109-202 57-189 (218)
276 2lst_A Thioredoxin; structural 98.8 1.3E-12 4.4E-17 110.7 0.0 91 449-544 17-118 (130)
277 2b5x_A YKUV protein, TRXY; thi 99.2 5.8E-11 2E-15 102.7 10.1 101 436-542 15-145 (148)
278 3dwv_A Glutathione peroxidase- 99.2 4.9E-11 1.7E-15 107.8 9.9 91 109-201 45-184 (187)
279 3drn_A Peroxiredoxin, bacterio 99.2 1E-10 3.5E-15 102.9 11.7 76 109-186 27-131 (161)
280 3cmi_A Peroxiredoxin HYR1; thi 99.2 2.5E-11 8.5E-16 108.1 7.7 89 109-200 31-168 (171)
281 2k6v_A Putative cytochrome C o 99.2 3E-11 1E-15 107.6 8.2 90 109-198 34-171 (172)
282 2vup_A Glutathione peroxidase- 99.2 6.4E-11 2.2E-15 107.3 10.0 90 109-200 47-185 (190)
283 2ggt_A SCO1 protein homolog, m 99.2 8.1E-11 2.8E-15 103.9 10.3 91 109-199 22-160 (164)
284 2v1m_A Glutathione peroxidase; 99.2 7.7E-11 2.6E-15 104.6 9.9 89 109-199 30-166 (169)
285 2ls5_A Uncharacterized protein 98.8 2.7E-12 9.3E-17 112.9 0.0 89 109-199 32-147 (159)
286 2p5q_A Glutathione peroxidase 99.2 7.2E-11 2.5E-15 104.9 9.1 90 109-200 31-168 (170)
287 2p31_A CL683, glutathione pero 99.2 5.4E-11 1.8E-15 106.9 8.0 89 109-199 48-180 (181)
288 2f8a_A Glutathione peroxidase 99.2 6.5E-11 2.2E-15 108.6 8.6 89 109-199 46-206 (208)
289 1lu4_A Soluble secreted antige 99.1 8.8E-11 3E-15 100.0 8.7 99 435-541 9-135 (136)
290 3raz_A Thioredoxin-related pro 99.1 1.2E-10 3.9E-15 101.3 9.5 89 450-542 23-140 (151)
291 2h8l_A Protein disulfide-isome 99.1 3.1E-09 1.1E-13 100.7 20.1 197 93-303 6-229 (252)
292 3kij_A Probable glutathione pe 99.1 1.4E-10 4.7E-15 104.1 9.9 89 109-199 37-169 (180)
293 2h30_A Thioredoxin, peptide me 99.1 9E-11 3.1E-15 103.6 8.5 104 434-542 22-156 (164)
294 1z6n_A Hypothetical protein PA 99.1 4.4E-11 1.5E-15 105.0 5.9 66 450-518 53-124 (167)
295 1zzo_A RV1677; thioredoxin fol 99.1 1.7E-10 5.9E-15 98.0 9.4 100 435-542 10-135 (136)
296 3erw_A Sporulation thiol-disul 99.1 1.3E-10 4.4E-15 100.1 8.5 84 450-537 33-144 (145)
297 3or5_A Thiol:disulfide interch 99.1 2.3E-10 8E-15 101.0 9.7 105 435-544 19-153 (165)
298 3ec3_A Protein disulfide-isome 99.1 9.8E-09 3.4E-13 97.1 21.3 197 93-303 6-227 (250)
299 2dlx_A UBX domain-containing p 99.1 6.7E-10 2.3E-14 95.5 11.9 89 107-199 39-135 (153)
300 2f9s_A Thiol-disulfide oxidore 99.1 1.9E-10 6.4E-15 100.0 8.6 91 450-544 25-140 (151)
301 3kp9_A Vkorc1/thioredoxin doma 99.1 3.2E-11 1.1E-15 114.6 3.9 84 101-199 190-279 (291)
302 1we0_A Alkyl hydroperoxide red 99.1 2.3E-10 7.9E-15 103.3 9.4 89 109-199 30-156 (187)
303 2obi_A PHGPX, GPX-4, phospholi 99.1 2.2E-10 7.5E-15 103.1 9.0 88 109-198 46-182 (183)
304 2bmx_A Alkyl hydroperoxidase C 99.1 3.9E-10 1.3E-14 102.6 10.5 90 109-200 44-170 (195)
305 2l4c_A Endoplasmic reticulum r 99.1 3.2E-10 1.1E-14 93.7 8.9 104 197-304 15-124 (124)
306 1zof_A Alkyl hydroperoxide-red 99.1 2.7E-10 9.2E-15 104.0 9.3 89 109-199 32-160 (198)
307 2gs3_A PHGPX, GPX-4, phospholi 99.1 2.2E-10 7.6E-15 103.2 8.6 88 109-198 48-184 (185)
308 1xvw_A Hypothetical protein RV 99.1 3.4E-10 1.2E-14 99.4 9.6 87 109-197 34-157 (160)
309 2e7p_A Glutaredoxin; thioredox 99.1 1.2E-10 4.1E-15 96.2 6.2 86 102-198 12-106 (116)
310 4evm_A Thioredoxin family prot 99.1 3.1E-10 1.1E-14 96.6 9.0 86 450-540 21-137 (138)
311 2k8s_A Thioredoxin; dimer, str 99.1 1E-10 3.4E-15 89.3 5.0 61 114-179 4-65 (80)
312 1jfu_A Thiol:disulfide interch 99.1 5.2E-10 1.8E-14 100.9 10.4 135 403-542 13-180 (186)
313 3ewl_A Uncharacterized conserv 99.1 4.6E-10 1.6E-14 96.3 9.3 86 450-542 26-141 (142)
314 1wjk_A C330018D20RIK protein; 99.1 3E-10 1E-14 90.6 7.5 80 110-200 15-96 (100)
315 3eyt_A Uncharacterized protein 99.0 4.6E-10 1.6E-14 98.3 9.0 90 450-543 27-153 (158)
316 3eur_A Uncharacterized protein 99.0 7.2E-10 2.4E-14 95.1 9.7 84 450-539 30-142 (142)
317 3ia1_A THIO-disulfide isomeras 99.0 3.7E-10 1.3E-14 98.4 7.8 86 452-544 31-146 (154)
318 2l5o_A Putative thioredoxin; s 99.0 5.4E-10 1.9E-14 97.2 8.7 101 438-543 16-142 (153)
319 2lja_A Putative thiol-disulfid 99.0 5.7E-10 1.9E-14 97.0 8.8 90 450-543 29-144 (152)
320 3fkf_A Thiol-disulfide oxidore 99.0 5.6E-10 1.9E-14 96.4 8.6 86 450-542 32-146 (148)
321 3lor_A Thiol-disulfide isomera 99.0 8.2E-10 2.8E-14 96.9 9.4 101 438-543 18-156 (160)
322 1xzo_A BSSCO, hypothetical pro 99.0 1.6E-09 5.4E-14 96.5 11.4 92 109-200 32-172 (174)
323 2b7k_A SCO1 protein; metalloch 99.0 8.9E-10 3.1E-14 100.5 9.8 91 109-199 40-178 (200)
324 2fgx_A Putative thioredoxin; N 99.0 2E-10 6.7E-15 91.7 4.6 75 453-537 30-106 (107)
325 2i3y_A Epididymal secretory gl 99.0 2.2E-09 7.5E-14 98.5 12.1 89 109-200 55-211 (215)
326 1qmv_A Human thioredoxin perox 99.0 2E-09 7E-14 97.9 11.5 89 109-199 33-162 (197)
327 2b1k_A Thiol:disulfide interch 99.0 4.7E-10 1.6E-14 99.4 6.9 101 435-541 33-159 (168)
328 1ttz_A Conserved hypothetical 99.0 2.1E-10 7E-15 88.4 3.9 73 455-542 3-77 (87)
329 3ira_A Conserved protein; meth 99.0 4E-10 1.4E-14 98.9 6.0 76 440-518 29-118 (173)
330 3hcz_A Possible thiol-disulfid 99.0 2.7E-10 9.2E-15 98.5 4.2 88 450-541 30-145 (148)
331 1hyu_A AHPF, alkyl hydroperoxi 99.0 3.3E-09 1.1E-13 111.8 13.3 96 96-198 102-198 (521)
332 3kcm_A Thioredoxin family prot 99.0 1.6E-09 5.5E-14 94.3 8.8 89 450-542 27-143 (154)
333 1un2_A DSBA, thiol-disulfide i 99.0 1.1E-10 3.7E-15 105.7 1.1 112 371-496 43-159 (197)
334 1uul_A Tryparedoxin peroxidase 98.9 2.9E-09 1E-13 97.3 10.6 89 109-199 35-164 (202)
335 3gl3_A Putative thiol:disulfid 98.9 1.7E-09 5.9E-14 93.9 8.6 91 450-544 27-144 (152)
336 3lwa_A Secreted thiol-disulfid 98.9 8.9E-10 3E-14 99.1 6.9 88 450-541 58-180 (183)
337 3ha9_A Uncharacterized thiored 98.9 2.5E-09 8.5E-14 94.3 9.7 84 450-541 36-163 (165)
338 2jsy_A Probable thiol peroxida 98.9 5E-09 1.7E-13 92.6 11.5 87 109-199 43-166 (167)
339 2h01_A 2-Cys peroxiredoxin; th 98.9 2.8E-09 9.7E-14 96.6 10.0 89 109-199 30-158 (192)
340 2i81_A 2-Cys peroxiredoxin; st 98.9 4E-09 1.4E-13 97.1 11.0 89 109-199 51-179 (213)
341 1zye_A Thioredoxin-dependent p 98.9 3.7E-09 1.3E-13 97.8 10.5 89 109-199 55-184 (220)
342 3hdc_A Thioredoxin family prot 98.9 2.5E-09 8.6E-14 93.6 8.8 89 450-542 40-152 (158)
343 2r37_A Glutathione peroxidase 98.9 5.2E-09 1.8E-13 95.6 10.8 88 109-199 37-192 (207)
344 3ztl_A Thioredoxin peroxidase; 98.9 7.1E-09 2.4E-13 96.1 11.4 87 109-197 68-195 (222)
345 1kng_A Thiol:disulfide interch 98.9 1.7E-09 5.7E-14 94.4 6.7 93 441-541 33-151 (156)
346 1hyu_A AHPF, alkyl hydroperoxi 98.9 1.7E-08 6E-13 106.2 15.3 176 324-540 20-198 (521)
347 1ego_A Glutaredoxin; electron 98.9 4E-09 1.4E-13 81.4 7.7 76 113-199 2-83 (85)
348 2lrn_A Thiol:disulfide interch 98.9 5.3E-09 1.8E-13 90.8 9.3 86 450-542 28-141 (152)
349 3gkn_A Bacterioferritin comigr 98.9 6.5E-09 2.2E-13 91.4 9.9 88 109-198 34-160 (163)
350 1i5g_A Tryparedoxin II; electr 98.9 4.2E-09 1.4E-13 90.5 8.3 83 435-518 13-123 (144)
351 2lrt_A Uncharacterized protein 98.9 4E-09 1.4E-13 91.6 8.1 86 450-539 34-145 (152)
352 1xvq_A Thiol peroxidase; thior 98.9 6.3E-09 2.2E-13 92.7 8.9 70 109-183 43-146 (175)
353 1o8x_A Tryparedoxin, TRYX, TXN 98.9 6.2E-09 2.1E-13 89.7 8.6 69 450-518 27-123 (146)
354 2a4v_A Peroxiredoxin DOT5; yea 98.8 2.3E-08 7.7E-13 87.5 12.0 82 105-189 30-140 (159)
355 2hyx_A Protein DIPZ; thioredox 98.8 4.6E-09 1.6E-13 103.6 7.8 88 450-541 81-198 (352)
356 3me7_A Putative uncharacterize 98.8 1.4E-08 4.8E-13 89.9 10.1 94 109-202 27-164 (170)
357 1o73_A Tryparedoxin; electron 98.8 7.8E-09 2.7E-13 88.7 8.0 69 450-518 27-123 (144)
358 2c0d_A Thioredoxin peroxidase 98.8 1.6E-08 5.5E-13 93.3 10.7 89 109-199 55-183 (221)
359 3s9f_A Tryparedoxin; thioredox 98.8 1.1E-08 3.7E-13 90.1 8.9 69 450-518 47-143 (165)
360 2dlx_A UBX domain-containing p 98.8 9.8E-09 3.4E-13 88.2 8.2 95 441-541 29-135 (153)
361 1eej_A Thiol:disulfide interch 98.8 9.4E-09 3.2E-13 94.8 8.4 81 109-198 85-209 (216)
362 4g2e_A Peroxiredoxin; redox pr 98.8 4E-09 1.4E-13 92.0 5.6 87 109-197 29-155 (157)
363 1n8j_A AHPC, alkyl hydroperoxi 98.8 4E-08 1.4E-12 88.3 12.2 89 109-199 29-155 (186)
364 3ixr_A Bacterioferritin comigr 98.8 2.4E-08 8.3E-13 89.2 10.7 87 109-197 50-175 (179)
365 3gyk_A 27KDA outer membrane pr 98.8 2.2E-08 7.4E-13 89.2 10.2 83 109-199 21-172 (175)
366 3kh7_A Thiol:disulfide interch 98.8 9E-09 3.1E-13 91.8 7.4 85 450-542 57-167 (176)
367 4fo5_A Thioredoxin-like protei 98.8 1.4E-08 4.8E-13 87.1 7.9 82 450-538 31-141 (143)
368 2e7p_A Glutaredoxin; thioredox 98.8 1.4E-09 4.8E-14 89.6 1.4 79 451-541 19-107 (116)
369 2pn8_A Peroxiredoxin-4; thiore 98.8 3.5E-08 1.2E-12 90.6 10.9 89 109-199 47-176 (211)
370 3fw2_A Thiol-disulfide oxidore 98.8 2.7E-08 9.4E-13 86.0 9.6 84 450-540 32-146 (150)
371 2ywi_A Hypothetical conserved 98.7 7.5E-09 2.6E-13 94.1 5.9 102 438-542 33-174 (196)
372 4gqc_A Thiol peroxidase, perox 98.7 4.4E-09 1.5E-13 92.4 4.0 95 103-199 26-159 (164)
373 3a2v_A Probable peroxiredoxin; 98.7 4.1E-08 1.4E-12 91.7 10.3 94 104-199 27-161 (249)
374 3kp9_A Vkorc1/thioredoxin doma 98.7 5.3E-09 1.8E-13 99.4 3.9 73 454-540 200-278 (291)
375 2k6v_A Putative cytochrome C o 98.7 1.4E-08 4.8E-13 90.1 5.6 88 450-540 34-171 (172)
376 1psq_A Probable thiol peroxida 98.7 1.2E-07 4E-12 83.3 11.5 85 109-197 41-162 (163)
377 2cvb_A Probable thiol-disulfid 98.7 3.9E-08 1.3E-12 88.7 8.6 91 450-542 32-159 (188)
378 1nm3_A Protein HI0572; hybrid, 98.7 1.1E-07 3.7E-12 89.5 11.9 75 109-185 32-143 (241)
379 2ls5_A Uncharacterized protein 98.1 2.2E-09 7.5E-14 94.0 0.0 87 450-540 32-146 (159)
380 1t3b_A Thiol:disulfide interch 98.7 4.4E-08 1.5E-12 89.9 8.6 83 109-198 85-209 (211)
381 3qpm_A Peroxiredoxin; oxidored 98.7 1.1E-07 3.9E-12 88.8 11.5 88 109-198 76-204 (240)
382 2lus_A Thioredoxion; CR-Trp16, 98.1 2.6E-09 8.8E-14 91.7 0.0 69 450-518 24-122 (143)
383 3uma_A Hypothetical peroxiredo 98.7 7E-08 2.4E-12 86.1 9.3 74 109-184 55-166 (184)
384 4hde_A SCO1/SENC family lipopr 98.7 1.6E-07 5.5E-12 82.9 11.6 105 95-199 17-169 (170)
385 1tp9_A Peroxiredoxin, PRX D (t 98.7 8.2E-08 2.8E-12 84.1 9.6 75 109-185 34-146 (162)
386 2wfc_A Peroxiredoxin 5, PRDX5; 98.7 1.1E-07 3.6E-12 83.7 10.1 74 109-184 30-141 (167)
387 2rli_A SCO2 protein homolog, m 98.6 4.6E-08 1.6E-12 86.6 7.8 89 450-541 25-163 (171)
388 3u5r_E Uncharacterized protein 98.6 5.7E-08 2E-12 89.8 8.7 106 435-542 43-187 (218)
389 2ggt_A SCO1 protein homolog, m 98.6 4.3E-08 1.5E-12 86.1 7.3 89 450-541 22-160 (164)
390 2l4c_A Endoplasmic reticulum r 98.6 7.7E-07 2.6E-11 73.4 13.7 93 95-198 23-122 (124)
391 2pwj_A Mitochondrial peroxired 98.6 9E-08 3.1E-12 84.6 8.6 45 108-154 42-88 (171)
392 2k8s_A Thioredoxin; dimer, str 98.6 8.2E-09 2.8E-13 78.6 1.4 60 454-517 3-65 (80)
393 1wjk_A C330018D20RIK protein; 98.6 3.9E-08 1.3E-12 78.2 5.1 79 450-542 14-96 (100)
394 1h75_A Glutaredoxin-like prote 98.6 6E-08 2E-12 73.9 5.9 70 114-197 3-75 (81)
395 1r7h_A NRDH-redoxin; thioredox 98.6 1.8E-07 6.2E-12 69.9 8.4 68 114-195 3-73 (75)
396 2yzh_A Probable thiol peroxida 98.6 1.6E-07 5.6E-12 83.1 9.4 85 109-198 46-170 (171)
397 3drn_A Peroxiredoxin, bacterio 98.6 7.7E-08 2.6E-12 84.2 7.0 86 450-539 27-146 (161)
398 1q98_A Thiol peroxidase, TPX; 98.6 1.7E-07 5.9E-12 82.4 9.0 72 109-184 42-148 (165)
399 3tjj_A Peroxiredoxin-4; thiore 98.6 2E-07 6.8E-12 87.8 9.8 88 109-198 90-218 (254)
400 3dwv_A Glutathione peroxidase- 98.6 1.4E-07 5E-12 84.8 8.6 103 435-542 31-183 (187)
401 2v1m_A Glutathione peroxidase; 98.6 5.8E-08 2E-12 85.7 5.8 88 450-541 30-166 (169)
402 3mng_A Peroxiredoxin-5, mitoch 98.6 1.8E-07 6.1E-12 82.6 8.8 74 109-184 42-155 (173)
403 3p7x_A Probable thiol peroxida 98.5 1.6E-07 5.5E-12 82.7 8.2 84 109-197 45-165 (166)
404 2p31_A CL683, glutathione pero 98.5 9E-08 3.1E-12 85.6 6.5 88 450-541 48-180 (181)
405 1v58_A Thiol:disulfide interch 98.5 3.6E-07 1.2E-11 85.6 10.7 86 109-199 96-232 (241)
406 3cmi_A Peroxiredoxin HYR1; thi 98.5 8.8E-08 3E-12 84.8 5.8 88 450-542 31-168 (171)
407 2vup_A Glutathione peroxidase- 98.5 1.2E-07 4E-12 85.6 6.6 89 450-542 47-185 (190)
408 1ego_A Glutaredoxin; electron 98.5 1.3E-07 4.4E-12 72.7 5.6 74 454-541 2-83 (85)
409 3h93_A Thiol:disulfide interch 98.5 4.9E-07 1.7E-11 81.6 10.4 86 109-199 24-183 (192)
410 2p5q_A Glutathione peroxidase 98.5 1.3E-07 4.4E-12 83.6 6.4 89 450-542 31-168 (170)
411 3zrd_A Thiol peroxidase; oxido 98.5 6E-07 2E-11 81.5 10.1 67 109-179 77-177 (200)
412 2obi_A PHGPX, GPX-4, phospholi 98.5 2.4E-07 8.2E-12 83.0 7.2 87 450-540 46-182 (183)
413 2f8a_A Glutathione peroxidase 98.5 2.6E-07 8.9E-12 84.5 7.4 44 450-494 46-89 (208)
414 1prx_A HORF6; peroxiredoxin, h 98.4 1.9E-06 6.4E-11 79.6 12.7 86 112-199 34-168 (224)
415 3hd5_A Thiol:disulfide interch 98.4 9.4E-07 3.2E-11 80.0 10.2 43 109-154 24-66 (195)
416 1we0_A Alkyl hydroperoxide red 98.4 1.9E-07 6.7E-12 83.9 5.1 89 450-542 30-157 (187)
417 1xvw_A Hypothetical protein RV 98.4 3E-07 1E-11 80.3 6.1 85 451-539 35-157 (160)
418 2bmx_A Alkyl hydroperoxidase C 98.4 3E-07 1E-11 83.3 6.2 89 450-542 44-170 (195)
419 1zof_A Alkyl hydroperoxide-red 98.4 2.4E-07 8.3E-12 84.2 5.5 88 450-541 32-160 (198)
420 1xcc_A 1-Cys peroxiredoxin; un 98.4 1E-06 3.5E-11 81.1 9.7 86 112-199 34-165 (220)
421 3kij_A Probable glutathione pe 98.3 8.5E-07 2.9E-11 79.1 7.8 58 435-494 23-80 (180)
422 2v2g_A Peroxiredoxin 6; oxidor 98.3 3E-06 1E-10 78.5 11.6 88 110-199 28-164 (233)
423 1kte_A Thioltransferase; redox 98.3 7.1E-07 2.4E-11 71.7 6.3 69 101-179 3-78 (105)
424 1qmv_A Human thioredoxin perox 98.3 1.1E-06 3.9E-11 79.6 7.6 88 450-541 33-162 (197)
425 2gs3_A PHGPX, GPX-4, phospholi 98.3 6.1E-07 2.1E-11 80.5 5.7 44 450-494 48-91 (185)
426 1xzo_A BSSCO, hypothetical pro 98.3 1.7E-06 5.9E-11 76.5 8.6 90 450-542 32-172 (174)
427 2cq9_A GLRX2 protein, glutared 98.2 2.5E-06 8.6E-11 71.3 7.8 86 100-198 17-113 (130)
428 2hze_A Glutaredoxin-1; thiored 98.2 3.8E-07 1.3E-11 74.5 2.5 59 113-179 20-85 (114)
429 3hz8_A Thiol:disulfide interch 98.2 7.7E-06 2.6E-10 73.6 11.1 42 109-153 23-64 (193)
430 1eej_A Thiol:disulfide interch 98.2 6.5E-07 2.2E-11 82.4 3.8 81 450-540 85-209 (216)
431 2ht9_A Glutaredoxin-2; thiored 98.2 3.4E-06 1.2E-10 71.8 7.8 67 100-179 39-112 (146)
432 3gyk_A 27KDA outer membrane pr 98.2 1.6E-06 5.6E-11 76.9 5.7 83 450-541 21-172 (175)
433 2h01_A 2-Cys peroxiredoxin; th 98.2 2.1E-06 7.3E-11 77.4 6.6 88 450-541 30-158 (192)
434 1zye_A Thioredoxin-dependent p 98.2 2.6E-06 9E-11 78.5 7.2 87 451-541 56-184 (220)
435 3ic4_A Glutaredoxin (GRX-1); s 98.2 3.2E-06 1.1E-10 65.9 6.5 69 114-196 14-91 (92)
436 1uul_A Tryparedoxin peroxidase 98.2 2.8E-06 9.7E-11 77.3 7.1 88 450-541 35-164 (202)
437 1t3b_A Thiol:disulfide interch 98.1 3.3E-06 1.1E-10 77.3 7.0 81 450-540 85-209 (211)
438 3ztl_A Thioredoxin peroxidase; 98.1 4.6E-06 1.6E-10 77.0 7.8 86 450-539 68-195 (222)
439 2znm_A Thiol:disulfide interch 98.1 1.2E-05 4E-10 72.7 10.0 42 109-153 21-62 (195)
440 1kte_A Thioltransferase; redox 98.1 5.7E-07 2E-11 72.3 1.1 83 454-541 13-102 (105)
441 2b7k_A SCO1 protein; metalloch 98.1 3.1E-06 1.1E-10 76.9 6.0 59 435-494 26-87 (200)
442 1h75_A Glutaredoxin-like prote 98.1 1.3E-06 4.5E-11 66.3 2.9 70 455-541 3-77 (81)
443 3gkn_A Bacterioferritin comigr 98.1 5E-06 1.7E-10 72.7 6.9 87 450-540 34-160 (163)
444 3c1r_A Glutaredoxin-1; oxidize 98.1 3.1E-06 1.1E-10 69.3 5.1 69 101-179 16-92 (118)
445 2i81_A 2-Cys peroxiredoxin; st 98.1 3.8E-06 1.3E-10 77.0 6.0 88 450-541 51-179 (213)
446 2jsy_A Probable thiol peroxida 98.1 7.3E-06 2.5E-10 72.0 7.5 85 450-540 43-165 (167)
447 1r7h_A NRDH-redoxin; thioredox 98.0 6.2E-06 2.1E-10 61.3 5.4 67 455-538 3-74 (75)
448 2yan_A Glutaredoxin-3; oxidore 98.0 1.5E-05 5E-10 63.8 7.8 66 101-179 8-82 (105)
449 1xvq_A Thiol peroxidase; thior 98.0 1.3E-05 4.3E-10 71.0 7.9 85 450-541 43-167 (175)
450 2a4v_A Peroxiredoxin DOT5; yea 98.0 1E-05 3.5E-10 70.3 7.2 69 452-526 36-135 (159)
451 3nzn_A Glutaredoxin; structura 98.0 1.5E-05 5.3E-10 63.4 7.6 74 111-195 21-101 (103)
452 1z6m_A Conserved hypothetical 98.0 3.6E-05 1.2E-09 68.1 10.8 83 109-196 26-174 (175)
453 2rem_A Disulfide oxidoreductas 98.0 4.2E-05 1.4E-09 68.8 11.2 41 110-153 25-65 (193)
454 3gv1_A Disulfide interchange p 98.0 1.9E-05 6.5E-10 67.2 8.3 81 109-200 13-139 (147)
455 4f82_A Thioredoxin reductase; 98.0 3.1E-05 1.1E-09 67.7 9.6 75 102-178 40-150 (176)
456 2i3y_A Epididymal secretory gl 98.0 2.1E-05 7E-10 71.9 8.7 43 450-494 55-97 (215)
457 2lqo_A Putative glutaredoxin R 98.0 3E-05 1E-09 59.9 8.3 75 113-200 5-84 (92)
458 3sbc_A Peroxiredoxin TSA1; alp 98.0 9.6E-05 3.3E-09 66.7 12.9 88 109-198 51-179 (216)
459 3keb_A Probable thiol peroxida 98.0 3.2E-05 1.1E-09 70.4 9.8 84 109-199 47-175 (224)
460 2klx_A Glutaredoxin; thioredox 98.0 8.7E-06 3E-10 62.9 5.2 56 113-179 7-65 (89)
461 2hze_A Glutaredoxin-1; thiored 97.9 9.3E-07 3.2E-11 72.2 -0.7 82 453-542 19-110 (114)
462 3rhb_A ATGRXC5, glutaredoxin-C 97.9 1.7E-05 6E-10 64.4 6.5 66 101-179 10-83 (113)
463 3feu_A Putative lipoprotein; a 97.9 3E-05 1E-09 69.2 8.5 30 110-139 22-51 (185)
464 3l9v_A Putative thiol-disulfid 97.9 2.4E-05 8.1E-10 70.1 7.8 42 110-154 14-58 (189)
465 3hd5_A Thiol:disulfide interch 97.9 4E-05 1.4E-09 69.1 9.3 43 450-494 24-66 (195)
466 3h93_A Thiol:disulfide interch 97.9 1.6E-05 5.6E-10 71.5 6.6 42 450-493 24-65 (192)
467 3qmx_A Glutaredoxin A, glutare 97.9 2.2E-05 7.5E-10 61.9 6.2 59 110-179 14-77 (99)
468 2c0d_A Thioredoxin peroxidase 97.9 4.1E-05 1.4E-09 70.4 8.8 88 450-541 55-183 (221)
469 1v58_A Thiol:disulfide interch 97.8 8.4E-06 2.9E-10 76.2 4.0 83 451-541 97-232 (241)
470 3msz_A Glutaredoxin 1; alpha-b 97.8 6E-05 2.1E-09 58.0 8.2 75 112-200 4-87 (89)
471 1fov_A Glutaredoxin 3, GRX3; a 97.8 7.1E-05 2.4E-09 56.6 8.1 67 114-196 3-73 (82)
472 2r37_A Glutathione peroxidase 97.8 4.7E-05 1.6E-09 69.1 8.0 42 450-493 37-78 (207)
473 3bj5_A Protein disulfide-isome 97.8 0.00032 1.1E-08 59.7 12.7 108 94-204 15-131 (147)
474 1un2_A DSBA, thiol-disulfide i 97.8 6.7E-06 2.3E-10 74.1 2.1 44 110-156 113-159 (197)
475 3ixr_A Bacterioferritin comigr 97.8 5.4E-05 1.8E-09 67.2 8.0 101 435-540 36-176 (179)
476 4dvc_A Thiol:disulfide interch 97.8 0.00017 5.7E-09 64.2 11.0 86 109-199 20-181 (184)
477 2cq9_A GLRX2 protein, glutared 97.7 7.2E-06 2.5E-10 68.5 1.4 88 442-540 19-113 (130)
478 2pn8_A Peroxiredoxin-4; thiore 97.7 6.6E-05 2.3E-09 68.5 7.7 87 450-540 47-175 (211)
479 2ht9_A Glutaredoxin-2; thiored 97.7 9.9E-06 3.4E-10 68.9 1.5 78 455-540 51-135 (146)
480 3h8q_A Thioredoxin reductase 3 97.7 0.00011 3.7E-09 59.6 7.6 66 100-178 7-79 (114)
481 3ctg_A Glutaredoxin-2; reduced 97.7 3.2E-05 1.1E-09 64.3 4.3 72 100-179 27-104 (129)
482 4eo3_A Bacterioferritin comigr 97.7 9.4E-05 3.2E-09 72.0 8.3 85 109-199 23-138 (322)
483 2ec4_A FAS-associated factor 1 97.7 0.00049 1.7E-08 60.3 12.1 89 108-199 53-167 (178)
484 2khp_A Glutaredoxin; thioredox 97.7 7.1E-05 2.4E-09 58.1 6.0 56 113-179 7-66 (92)
485 1n8j_A AHPC, alkyl hydroperoxi 97.7 8.8E-05 3E-09 66.2 7.4 88 450-541 29-155 (186)
486 3me7_A Putative uncharacterize 97.6 0.00018 6.1E-09 63.2 8.9 90 451-543 28-163 (170)
487 3qpm_A Peroxiredoxin; oxidored 97.6 0.00016 5.4E-09 67.4 8.1 87 450-540 76-204 (240)
488 3a2v_A Probable peroxiredoxin; 97.6 7.4E-05 2.5E-09 69.6 5.6 87 450-540 32-160 (249)
489 3c1r_A Glutaredoxin-1; oxidize 97.5 1.4E-05 4.7E-10 65.5 0.5 59 455-518 27-93 (118)
490 1nm3_A Protein HI0572; hybrid, 97.5 0.00012 4.2E-09 68.4 7.1 87 450-540 32-165 (241)
491 2lqo_A Putative glutaredoxin R 97.5 0.00018 6.1E-09 55.5 6.6 75 454-544 5-86 (92)
492 2klx_A Glutaredoxin; thioredox 97.5 3.6E-05 1.2E-09 59.4 2.5 55 454-518 7-66 (89)
493 4g2e_A Peroxiredoxin; redox pr 97.5 5.2E-05 1.8E-09 65.6 3.7 89 450-539 29-155 (157)
494 3ic4_A Glutaredoxin (GRX-1); s 97.5 6.5E-05 2.2E-09 58.3 3.8 70 454-538 13-91 (92)
495 3l9s_A Thiol:disulfide interch 97.4 0.0003 1E-08 62.9 7.8 40 110-152 21-63 (191)
496 1wik_A Thioredoxin-like protei 97.4 0.00027 9.1E-09 56.8 6.7 65 101-178 6-79 (109)
497 3tue_A Tryparedoxin peroxidase 97.4 0.0011 3.9E-08 59.8 10.9 88 109-198 55-183 (219)
498 2znm_A Thiol:disulfide interch 97.4 0.00032 1.1E-08 63.1 7.3 41 450-492 21-61 (195)
499 4dvc_A Thiol:disulfide interch 97.4 0.0007 2.4E-08 60.0 9.5 41 451-491 21-61 (184)
500 3nzn_A Glutaredoxin; structura 97.4 0.00022 7.7E-09 56.5 5.5 73 451-537 20-101 (103)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.2e-62 Score=518.88 Aligned_cols=440 Identities=34% Similarity=0.605 Sum_probs=392.7
Q ss_pred CeEEeChhhHHHHHhCC---CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 94 DVVVLKERNFSDVIENN---KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~---~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
+|+.||+++|++.+..+ ++++|+|||+||++|+++.|.|.++++.+++ .+.|+.|||++++.+|++|+|+++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG---IVPLAKVDCTANTNTCNKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCCEEEEETTTCHHHHHHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC---ceEEEEEECCCCHHHHHhcCCCCCCE
Confidence 58899999999999877 9999999999999999999999999999987 59999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhc-cccCce
Q 007882 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLEDDV 248 (586)
Q Consensus 171 ~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~-~~~~~~ 248 (586)
+++|++| ....|.|.++.+.|.+|+.+.+++.+..+.+.+++++++..++..+|+||.+..+.....|..++ .+++++
T Consensus 79 l~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~ 158 (481)
T 3f8u_A 79 LKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNY 158 (481)
T ss_dssp EEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTS
T ss_pred EEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCc
Confidence 9999999 67899999999999999999999999999999999999999999999999888888899998887 677999
Q ss_pred eEEecCChhHHHhcCCCCCCCCCeeEEec------cCCcceeccc-CCCChhHHHHHHHhcCCCceeecCCCcccccccC
Q 007882 249 NFYQTTNPDVAKIFHLDSKVNRPALVMVK------KETEKISYFD-GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFES 321 (586)
Q Consensus 249 ~F~~~~~~~~~~~~~~~~~~~~p~l~~~~------~~~~~~~~y~-g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~ 321 (586)
.|+.+.+++++++++++. +.+++|+ ..++....|. |.++.++|.+||..+++|+++++|.++...++..
T Consensus 159 ~F~~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~ 234 (481)
T 3f8u_A 159 RFAHTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK 234 (481)
T ss_dssp CEEEECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTS
T ss_pred eEEEECCHHHHHHhCCCC----CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCC
Confidence 999999999999999974 5688898 4456678888 8899999999999999999999999999988754
Q ss_pred CcccEEEEEEec-c-c---hhhHHHHHHHHHHhccCc---eEEEEEECCCcccccccccccCcc--CCCCceEEEecCCC
Q 007882 322 PIKNQLLLFAVS-N-D---SEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGIT--GEAPKVLAYTGNDD 391 (586)
Q Consensus 322 ~~~~~l~~~~~~-~-~---~~~~~~~l~~lA~~~~~~---~~f~~vd~~~~~~~~~~~~~~gi~--~~~~p~~~i~~~~~ 391 (586)
+..++++... . . .+.+...++++|++|+++ +.|+++|+.. ....+..||++ ....|.+++++ .+
T Consensus 235 --~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~---~~~~l~~~gl~~~~~~~P~~~i~~-~~ 308 (481)
T 3f8u_A 235 --DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRT-AK 308 (481)
T ss_dssp --SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCCCTTCSCEEEEEC-SS
T ss_pred --CceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHH---HHHHHHHcCCCcccCCCcEEEEEc-CC
Confidence 3333333322 1 1 123578899999999998 9999999875 34567899998 34789998887 55
Q ss_pred CCcccCCCCCCHH--HHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhh
Q 007882 392 AKKHILDGELTLD--KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAF 469 (586)
Q Consensus 392 ~~~y~~~~~~t~e--~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~ 469 (586)
+.+|.+.++++.+ .|.+|++++++|+++++++|+++|....+.++.+++++|++.+.+.+++++|+|||+||++|+.+
T Consensus 309 ~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~ 388 (481)
T 3f8u_A 309 GEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNL 388 (481)
T ss_dssp SCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHH
T ss_pred CcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHh
Confidence 6788998889999 99999999999999999999999998889999999999999997778999999999999999999
Q ss_pred hHHHHHHHHHhcCCCcEEEEEEeCCcccc-ccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCccc
Q 007882 470 EPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 547 (586)
Q Consensus 470 ~~~~~~~~~~~~~~~~i~~~~id~~~~~~-~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 547 (586)
.|.|.++++.+.+..++.++.+|++.++. ..++|.++||+++|++|.++ .+.+|.|.++.+.|.+||+++++.+...
T Consensus 389 ~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~-~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 466 (481)
T 3f8u_A 389 EPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKL-NPKKYEGGRELSDFISYLQREATNPPVI 466 (481)
T ss_dssp HHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCTT-SCEECCSCCSHHHHHHHHHHHCSSCCCC
T ss_pred hHHHHHHHHHhccCCCEEEEEEECCchhhHhhCCCcccCEEEEEeCCCeE-eeeEeCCCCCHHHHHHHHHHhcCCcccc
Confidence 99999999999876689999999999865 67999999999999999875 5679999999999999999999876653
No 2
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=3e-62 Score=518.30 Aligned_cols=437 Identities=30% Similarity=0.525 Sum_probs=388.5
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
...|+.|++.+|++++.++++++|.|||+||++|+.+.|.|.++++.+++. ++.|+.|||+.++.+|++|+|+++||+
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQDLCMEHNIPGFPSL 90 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 457999999999999999999999999999999999999999999999772 599999999999999999999999999
Q ss_pred EEEeCCe---eeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCC--eEEEEEecCCCCcchHHHHHhc-ccc
Q 007882 172 YFFVDGQ---HKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSET--KVVLGYLNSLVGSESEVLADAS-RLE 245 (586)
Q Consensus 172 ~~~~~g~---~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~--~~~i~~~~~~~~~~~~~f~~~~-~~~ 245 (586)
++|++|. ...|.|.++.+.|.+|+.+.+++.+..+++ +++|+...+ ..+|+||.+........|..++ .++
T Consensus 91 ~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~ 167 (504)
T 2b5e_A 91 KIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHF 167 (504)
T ss_dssp EEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhh
Confidence 9999994 889999999999999999999999999888 788888777 8999999987777888898877 678
Q ss_pred CceeEEecCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCC-C---ChhHHHHHHHhcCCCceeecCCCcccccccC
Q 007882 246 DDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGK-F---DKSTIADFVFSNKLPLVTIFTRENAPSVFES 321 (586)
Q Consensus 246 ~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~-~---~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~ 321 (586)
+++.|+.+. +++++++++ +++|+..+ ....|.|. + +.+.|..||..+++|+++++|.+++..++..
T Consensus 168 ~~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~ 237 (504)
T 2b5e_A 168 NDYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVES 237 (504)
T ss_dssp TTCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHT
T ss_pred cCcEEEEEH--HHHHhcCCe-------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcC
Confidence 999999887 666666652 77888766 67789998 7 8999999999999999999999999999988
Q ss_pred CcccEEEEEEeccchhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCC--C
Q 007882 322 PIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD--G 399 (586)
Q Consensus 322 ~~~~~l~~~~~~~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~--~ 399 (586)
+.+.+++++......+.+...++++|++|++++.|+|+|+.. ...+++.||+ ..+.|++++++...+.+|.+. +
T Consensus 238 ~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~---~~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~ 313 (504)
T 2b5e_A 238 GLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARK---FGRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLS 313 (504)
T ss_dssp TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHH---HTTHHHHTTC-CSCSSEEEEEETTTTEEEECCCCC
T ss_pred CCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhh---hHHHHHHcCC-cccCCEEEEEeCCcCcccCCCCCc
Confidence 877666665544445778899999999999999999999875 4468899999 777999999988777788876 5
Q ss_pred C-----------CCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhh
Q 007882 400 E-----------LTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQA 468 (586)
Q Consensus 400 ~-----------~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~ 468 (586)
+ ++.+.|..|+.+++.|++.|.++|+++|....+.+..+++++|+..+.+.++++||.|||+||++|+.
T Consensus 314 ~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~ 393 (504)
T 2b5e_A 314 EEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKR 393 (504)
T ss_dssp HHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHH
T ss_pred cchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHH
Confidence 5 89999999999999999999999999998888899999999999999888899999999999999999
Q ss_pred hhHHHHHHHHHhc-CCCcEEEEEEeCCccccccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCccc
Q 007882 469 FEPTYNKLAKHLR-GVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 547 (586)
Q Consensus 469 ~~~~~~~~~~~~~-~~~~i~~~~id~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 547 (586)
+.|.|+++++.+. +...+.++.+|++.+....++|+++||+++|++|+.. .+.+|.|.++.+.|.+||.+++......
T Consensus 394 ~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~G~~~-~~~~~~G~~~~~~l~~~i~~~~~~~~~~ 472 (504)
T 2b5e_A 394 LAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKS-ESVVYQGSRSLDSLFDFIKENGHFDVDG 472 (504)
T ss_dssp HHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSSCCCSSSSEEEEECCTTSC-CCCBCCSCCCHHHHHHHHHHHCTTCCCH
T ss_pred HhHHHHHHHHHhhccCCcEEEEEecCCccccccCCceecCeEEEEeCCcee-cceEecCCCCHHHHHHHHHhcCCCCCCH
Confidence 9999999999987 4457999999999887766999999999999999774 4568999999999999999999877654
Q ss_pred c
Q 007882 548 Q 548 (586)
Q Consensus 548 ~ 548 (586)
.
T Consensus 473 ~ 473 (504)
T 2b5e_A 473 K 473 (504)
T ss_dssp H
T ss_pred H
Confidence 3
No 3
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=8.2e-46 Score=412.90 Aligned_cols=417 Identities=19% Similarity=0.342 Sum_probs=341.3
Q ss_pred CCCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
++..|+.|+..+|++.++++++++|+|||+||++|+.+.|.|+++++.+.+ .+.++.|||++++.+|++|+|.++||
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 190 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVNSYPS 190 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCSSCC--------CE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC---ceEEEEEeCCCcHHHHHHcCCceeee
Confidence 346799999999999999999999999999999999999999999999877 59999999999999999999999999
Q ss_pred EEEEeCCe-eeeecCCCCHHHHHHHHHHhcCCCcccccch---hHHHHhcccCCeEEEEEecCCCC-cchHHHHHhc---
Q 007882 171 IYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPGIYNITTL---DEAERVLTSETKVVLGYLNSLVG-SESEVLADAS--- 242 (586)
Q Consensus 171 ~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~l~~~~~~~~~~~i~~~~~~~~-~~~~~f~~~~--- 242 (586)
+++|++|. ..+|.|.++.+.|.+|+.+.+++.+..+.+. +++.+++..+...+++|+..... +....+.+++
T Consensus 191 ~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f 270 (780)
T 3apo_A 191 LFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGML 270 (780)
T ss_dssp EEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHT
T ss_pred EEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHh
Confidence 99999994 6899999999999999999999999999887 68888887777777777765431 1212221111
Q ss_pred --------------------------------------------------------------------------------
Q 007882 243 -------------------------------------------------------------------------------- 242 (586)
Q Consensus 243 -------------------------------------------------------------------------------- 242 (586)
T Consensus 271 ~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~ 350 (780)
T 3apo_A 271 DGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLA 350 (780)
T ss_dssp TTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHT
T ss_pred hccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhc
Confidence
Q ss_pred --------------------------ccc-CceeEEec---CChhHHHhcCCCCCCCCCeeEEeccCC-cceecccCCCC
Q 007882 243 --------------------------RLE-DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKET-EKISYFDGKFD 291 (586)
Q Consensus 243 --------------------------~~~-~~~~F~~~---~~~~~~~~~~~~~~~~~p~l~~~~~~~-~~~~~y~g~~~ 291 (586)
.+. ..+.|+.+ .++.+++.+++.. |++++|+..+ +....|.|.++
T Consensus 351 ~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~----p~i~l~~~~~~e~~~~~~g~~~ 426 (780)
T 3apo_A 351 HHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ----PSLAVFKGQGTKEYEIHHGKKI 426 (780)
T ss_dssp TSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS----CEEEEEESSTTSSEEECCSCCC
T ss_pred cCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC----ChhhhccCCCcceeeecccHhh
Confidence 111 33556654 4567888888863 9999998876 55778999999
Q ss_pred hhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEec-cchhhHHHHHHHHHHhccCceEEEEEECCCccccccc
Q 007882 292 KSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPV 370 (586)
Q Consensus 292 ~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~ 370 (586)
.++|..|+..+..|.+..+|.+++..+ .+.+.++.+|... ..|....+.|.++|+++++++.|+.+|++.. ..+
T Consensus 427 ~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~~ 501 (780)
T 3apo_A 427 LYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIH---EGL 501 (780)
T ss_dssp HHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHH
T ss_pred HHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCC---HHH
Confidence 999999999999999999999999887 4444545555543 6899999999999999999999999999863 468
Q ss_pred ccccCccCCCCceEEEecCCCCCcccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhcc
Q 007882 371 SEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDE 450 (586)
Q Consensus 371 ~~~~gi~~~~~p~~~i~~~~~~~~y~~~~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~ 450 (586)
+..||+.. .|+++++..+ ..+.+.+..+.+.|.+|+.++++ +.+..+++++|++.+...
T Consensus 502 ~~~~~v~~--~Pt~~~~~~g--~~~~~~g~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~f~~~v~~~ 560 (780)
T 3apo_A 502 CNMYNIQA--YPTTVVFNQS--SIHEYEGHHSAEQILEFIEDLRN-----------------PSVVSLTPSTFNELVKQR 560 (780)
T ss_dssp HHHTTCCS--SSEEEEEETT--EEEEECSCSCHHHHHHHHHHHHS-----------------CSEEECCHHHHHHHTTTC
T ss_pred HHHcCCCc--CCeEEEEcCC--ceeeecCcccHHHHHHHHHhhcc-----------------cceeecCcccHHHHhhcc
Confidence 89999976 7888888543 44778899999999999999986 257889999999988653
Q ss_pred --CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcc-cCccccc
Q 007882 451 --SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKS-FDPINVD 525 (586)
Q Consensus 451 --~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~-~~~~~~~ 525 (586)
+..++|.||+|||++|+.+.|.|+++++.+++ .+.|+.+|++.+. +..++|.++|++++|+.|... ..+..|.
T Consensus 561 ~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~ 638 (780)
T 3apo_A 561 KHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYN 638 (780)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECC
T ss_pred CCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcC
Confidence 46789999999999999999999999999986 6999999998765 478999999999999887642 1356789
Q ss_pred c-ccCHHHHHHHHHhcCC
Q 007882 526 V-DRTVVALYKFLKKNAS 542 (586)
Q Consensus 526 g-~~~~~~l~~~i~~~~~ 542 (586)
| .++.+.|.+|+.++..
T Consensus 639 g~~~~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 639 GWNRDAYSLRSWGLGFLP 656 (780)
T ss_dssp CSCCSHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHhhhcc
Confidence 9 8999999999999873
No 4
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=1.2e-43 Score=359.75 Aligned_cols=340 Identities=35% Similarity=0.619 Sum_probs=303.5
Q ss_pred cCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhccccCceeEEecCChhHHHhcCCCCCCCCCeeEEecc
Q 007882 199 IGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKK 278 (586)
Q Consensus 199 ~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~ 278 (586)
..+.+..+.+.+++++|++.++.++|+||.+.+....+.|.+++...+++.|+.+++++++++++++. |++++|+.
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~----~~i~lfk~ 90 (361)
T 3uem_A 15 GSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDK----DGVVLFKK 90 (361)
T ss_dssp CCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCSS----SEEEEEES
T ss_pred ccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCCC----CeEEEEEe
Confidence 45667889999999999999999999999998888899999998655899999999999999999874 89999998
Q ss_pred CCcceecccCCCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEec--cchhhHHHHHHHHHHhccCceEE
Q 007882 279 ETEKISYFDGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIF 356 (586)
Q Consensus 279 ~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~l~~lA~~~~~~~~f 356 (586)
.++....|.|+++.++|.+||..++.|++.+++.+++..++..+.+.++++|... .+|+.+...|+++|++|++++.|
T Consensus 91 f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f 170 (361)
T 3uem_A 91 FDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILF 170 (361)
T ss_dssp STTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEE
T ss_pred cCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEE
Confidence 7778889999999999999999999999999999999999888777766666654 67999999999999999999999
Q ss_pred EEEECCCcccccccccccCccCCCCceEEEecCC-CCCcccCC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCC-CCC
Q 007882 357 VYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPET-NDG 433 (586)
Q Consensus 357 ~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~-~~~~y~~~-~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~-~~~ 433 (586)
+++|++... ...+++.||+.....|.+++++.+ ...+|.+. +.++.+.|.+|++++++|++++.++|+++|+. ..+
T Consensus 171 ~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~ 249 (361)
T 3uem_A 171 IFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 249 (361)
T ss_dssp EEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTS
T ss_pred EEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccC
Confidence 999998433 457889999987678999888764 44677764 68999999999999999999999999999987 467
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccccccCCCCcCcEEEEEe
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFP 513 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~~~~~i~~~Pt~~~~~ 513 (586)
.+..+++++|++.+.+.+++++|+|||+||++|+.+.|.|+++++.+++...+.++.+|++.+.+..++|.++||+++|+
T Consensus 250 ~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~ 329 (361)
T 3uem_A 250 PVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFP 329 (361)
T ss_dssp SSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEEC
T ss_pred CcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEE
Confidence 89999999999999888999999999999999999999999999999886689999999999999999999999999997
Q ss_pred CCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 514 AGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 514 ~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+|... .+.+|.|.++.+.|.+||+++++..
T Consensus 330 ~~~~~-~~~~~~G~~~~~~l~~~l~~~~~~~ 359 (361)
T 3uem_A 330 ASADR-TVIDYNGERTLDGFKKFLESGGQDG 359 (361)
T ss_dssp SSSSC-CCEECCSCSSHHHHHHHHTTTSCSC
T ss_pred CCCCc-ceeEecCCCCHHHHHHHHHhcCCCC
Confidence 77443 4569999999999999999987653
No 5
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.7e-43 Score=357.24 Aligned_cols=326 Identities=17% Similarity=0.263 Sum_probs=280.6
Q ss_pred CCCCCC-CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhh------HHHHHHHHHhhcCCCceEEEEEeCCCcHHH
Q 007882 87 EPEIDD-KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALA------PEYAAAATELKSANESVVLAKVDATEENEL 159 (586)
Q Consensus 87 ~~~~~~-~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~------p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l 159 (586)
.|.++. ..|+.|+..+|++++++++++||.|||+||+||+... |.|+++++.+++ .++.++.|||++++.+
T Consensus 6 ~p~~~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~--~~v~~~~Vd~~~~~~l 83 (367)
T 3us3_A 6 FPEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED--KGVGFGLVDSEKDAAV 83 (367)
T ss_dssp CCCCCCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT--TTEEEEEEETTTTHHH
T ss_pred CCCCCCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc--CCceEEEEeCcccHHH
Confidence 344444 4699999999999999999999999999999974433 789999999875 3599999999999999
Q ss_pred HHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcc-cCCeEEEEEecCCCCcchHHH
Q 007882 160 AHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSESEVL 238 (586)
Q Consensus 160 ~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~-~~~~~~i~~~~~~~~~~~~~f 238 (586)
|++|+|+++||+++|++|....|.|.++.+.|.+||.+.+++++..+.+.+++++++. +.+..+|+||.+........|
T Consensus 84 ~~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f 163 (367)
T 3us3_A 84 AKKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAF 163 (367)
T ss_dssp HHHHTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHH
T ss_pred HHHcCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHH
Confidence 9999999999999999998789999999999999999999999999999999999998 678899999998888888899
Q ss_pred HHhc-cccCceeEEecCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCC-CChhHHHHHHHhcCCCceeecCCCccc
Q 007882 239 ADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGK-FDKSTIADFVFSNKLPLVTIFTRENAP 316 (586)
Q Consensus 239 ~~~~-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~v~~lt~~~~~ 316 (586)
..++ .+++++.|+.+.++.++++++++. |+|++|+..++....|.|. ++.++|.+||..++.|+++++|.+++.
T Consensus 164 ~~~A~~~~~~~~F~~~~~~~~~~~~~v~~----p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~ 239 (367)
T 3us3_A 164 KEAAEEFHPYIPFFATFDSKVAKKLTLKL----NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMY 239 (367)
T ss_dssp HHHHHHHTTTSCEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHH
T ss_pred HHHHHhhcCCcEEEEECCHHHHHHcCCCC----CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHH
Confidence 8887 677899999999999999999973 9999999877778889995 899999999999999999999999998
Q ss_pred ccccCCc-ccEEEEEEecc--chhhHHHHHHHHHHhccC--ceEEEEEECCCccccccc---ccccCccCCCCceEEEec
Q 007882 317 SVFESPI-KNQLLLFAVSN--DSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPV---SEYFGITGEAPKVLAYTG 388 (586)
Q Consensus 317 ~~~~~~~-~~~l~~~~~~~--~~~~~~~~l~~lA~~~~~--~~~f~~vd~~~~~~~~~~---~~~~gi~~~~~p~~~i~~ 388 (586)
.++.... ..++++|.... .+..+...++++|++|++ ++.|+|+|+.... ..+ ...||+. ...|.+++++
T Consensus 240 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~--~~l~~~~~~fgl~-~~~P~~~i~~ 316 (367)
T 3us3_A 240 ETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFP--LLVPYWEKTFDID-LSAPQIGVVN 316 (367)
T ss_dssp HHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCT--TTHHHHHHHHTCC-TTSCEEEEEE
T ss_pred HHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccch--hHHHHHHHhcCCC-CCCCeEEEEe
Confidence 8776533 34566666643 367888999999999998 7999999987633 221 3459998 4589999998
Q ss_pred CCCC--CcccCCC---CCCHHHHHHHHHHHhcCCCCCC
Q 007882 389 NDDA--KKHILDG---ELTLDKIKTFGEDFLEGKLKPF 421 (586)
Q Consensus 389 ~~~~--~~y~~~~---~~t~e~i~~fi~~~~~gkl~~~ 421 (586)
...+ .+|.+.+ ++|.++|.+|++++++|+++|.
T Consensus 317 ~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 317 VTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp TTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred cccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 7755 4676664 7999999999999999999986
No 6
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-44 Score=361.92 Aligned_cols=352 Identities=22% Similarity=0.357 Sum_probs=264.5
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC---CCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA---NESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
+.|+.|++++|+.++.++++++|.|||+||++|+.+.|.|.++++.++.. +.++.++.|||+.+..+|++|+|+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 45889999999999998999999999999999999999999999998542 225999999999999999999999999
Q ss_pred EEEEEeCCeee--eecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhc-cccC
Q 007882 170 TIYFFVDGQHK--AYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLED 246 (586)
Q Consensus 170 t~~~~~~g~~~--~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~-~~~~ 246 (586)
|+++|++|... .|.|.++.+.|.+|+.+.+++++..+.+.++++. +.....++|+||.+...+....|..++ .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 99999999543 5999999999999999999999999988888888 677778899999887777788898877 6778
Q ss_pred ceeEEecCChhHHHhcCCCCCCCCCeeEEeccC--CcceecccCCC-ChhHHHHHHHhcCCCceeecCCCcccccccCCc
Q 007882 247 DVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKE--TEKISYFDGKF-DKSTIADFVFSNKLPLVTIFTRENAPSVFESPI 323 (586)
Q Consensus 247 ~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~y~g~~-~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~ 323 (586)
++.|+.+.+ ++++.++++. .| ++|++. ......|.|.+ +.++|..||+.++.|+++++|.+++..++..+.
T Consensus 164 ~~~F~~~~~-~~~~~~~v~~---~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 237 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYSG---DN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGL 237 (382)
T ss_dssp TCEEEEEES-CC-----------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCC
T ss_pred cceEEEEeh-hhHHhhCCCC---Cc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCC
Confidence 999998887 6788888864 46 556654 33567899998 899999999999999999999999999887776
Q ss_pred ccEEEEEEecc--chhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCC---
Q 007882 324 KNQLLLFAVSN--DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD--- 398 (586)
Q Consensus 324 ~~~l~~~~~~~--~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~--- 398 (586)
+.+++++.... ..+.+...+.++|.++++++.|+|+|+.. ...++..||++..+.|++++.+.+. .|.+.
T Consensus 238 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~---~~~~~~~~gl~~~~~P~i~i~~~~~--~y~~~~~~ 312 (382)
T 2r2j_A 238 PFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDK---FRHPLLHIQKTPADCPVIAIDSFRH--MYVFGDFK 312 (382)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTT---THHHHHHTTCCGGGCSEEEEECSSC--EEECCCSG
T ss_pred cEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHH---hHHHHHHcCCCccCCCEEEEEcchh--cCCCCccc
Confidence 66555544331 24456667778888999999999999875 3356889999877789999886543 35443
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC------CCCeEEEeCcchhHHhhccCCcEEE
Q 007882 399 GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN------DGDVKIVVGNNFDEIVLDESKDVLL 456 (586)
Q Consensus 399 ~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~------~~~v~~l~~~~f~~~v~~~~~~~~v 456 (586)
+.++.+.|.+|++++++|+++|+++|+++|+.+ +..+.....++|++..-...+.+++
T Consensus 313 ~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~~s~f~~l~~~~~~~~~~ 376 (382)
T 2r2j_A 313 DVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLL 376 (382)
T ss_dssp GGGSTTHHHHHHHHHHHTTTSSCC-------------------CCCCCCSGGGGSCCTTTCEEC
T ss_pred cccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCCcccccccCCCccceecc
Confidence 346789999999999999999999999999876 2233456778999876555666665
No 7
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=5.4e-42 Score=345.19 Aligned_cols=316 Identities=17% Similarity=0.275 Sum_probs=277.2
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHH-------HHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCC
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPE-------YAAAATELKSANESVVLAKVDATEENELAHEYDV 165 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~-------~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i 165 (586)
..|+.|++.+|++.+.++++++|+|||+||+ |+.++|. |+++++.+++. ++.++.|||++++.+|++|+|
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~~~~l~~~~~v 87 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKKEAKLAKKLGF 87 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTTTHHHHHHHTC
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCCCHHHHHhcCC
Confidence 4699999999999999899999999999999 9999999 99999998762 599999999999999999999
Q ss_pred CCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcc-cCCeEEEEEecCCCCcchHHHHHhc-c
Q 007882 166 QGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSESEVLADAS-R 243 (586)
Q Consensus 166 ~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~-~~~~~~i~~~~~~~~~~~~~f~~~~-~ 243 (586)
+++||+++|++|....|.|.++.+.|.+|+.+.+++++..+.+.+++++++. +.+..+|+||.+.+......|..++ .
T Consensus 88 ~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~ 167 (350)
T 1sji_A 88 DEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEH 167 (350)
T ss_dssp CSTTEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHH
T ss_pred CccceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHh
Confidence 9999999999998889999999999999999999999999999999999998 7788899999887777788898877 6
Q ss_pred ccCceeEEecCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCC-CChhHHHHHHHhcCCCceeecCCCcccccccCC
Q 007882 244 LEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGK-FDKSTIADFVFSNKLPLVTIFTRENAPSVFESP 322 (586)
Q Consensus 244 ~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~ 322 (586)
++.++.|+.+.+++++++++++ .|++++|++.++....|+|. ++.++|.+||..++.|++.++|.+++..++..+
T Consensus 168 ~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 243 (350)
T 1sji_A 168 FQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDD 243 (350)
T ss_dssp TTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSC
T ss_pred hccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCC
Confidence 7799999999999999999997 49999999877777889997 899999999999999999999999999988765
Q ss_pred c-ccEEEEEEeccc--hhhHHHHHHHHHHhccC--ceEEEEEECCCcccccccc----cccCccCCCCceEEEecCCCCC
Q 007882 323 I-KNQLLLFAVSND--SEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPVS----EYFGITGEAPKVLAYTGNDDAK 393 (586)
Q Consensus 323 ~-~~~l~~~~~~~~--~~~~~~~l~~lA~~~~~--~~~f~~vd~~~~~~~~~~~----~~~gi~~~~~p~~~i~~~~~~~ 393 (586)
. +.++++|....+ +..+...++++|+++++ ++.|+|+|+... ..++ +.||++ ...|++++++..++.
T Consensus 244 ~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~---~~~~~~~~~~~gi~-~~~P~~~i~~~~~~~ 319 (350)
T 1sji_A 244 LNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDF---PLLVAYWEKTFKID-LFKPQIGVVNVTDAD 319 (350)
T ss_dssp SSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGC---HHHHHHHHHHCCSC-TTSCEEEEEESSSSC
T ss_pred CCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhh---HHHHHHHHhhcCCC-ccCCcEEEEeccccc
Confidence 5 555666665433 56889999999999987 899999998753 3455 789998 357999998876554
Q ss_pred ccc--CC---CCCCHHHHHHHHHHHhcCCCC
Q 007882 394 KHI--LD---GELTLDKIKTFGEDFLEGKLK 419 (586)
Q Consensus 394 ~y~--~~---~~~t~e~i~~fi~~~~~gkl~ 419 (586)
+|. +. +.++.++|.+|++++++|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 320 SVWMEIPDDDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp EEESCSSCCSCCCCHHHHHHHHHHHHTSCC-
T ss_pred ccccCCCcccccCCHHHHHHHHHHHhcCccC
Confidence 444 43 489999999999999999874
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.1e-35 Score=329.05 Aligned_cols=316 Identities=20% Similarity=0.378 Sum_probs=262.2
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..++..+|+.. .+++++|+|||+||++|+.++|.|.++++.+++ ++.|+.|||++++.+++.|+|.++||++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 514 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG---QLKVGTLDCTIHEGLCNMYNIQAYPTTV 514 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCCcCCeEE
Confidence 45889999999887 788999999999999999999999999999976 7999999999999999999999999999
Q ss_pred EEeCCeeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhccccCceeEEe
Q 007882 173 FFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQ 252 (586)
Q Consensus 173 ~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~~~~~~~~F~~ 252 (586)
++++|....|.|..+.+.|.+|+.+.+.+++..++. +++++++...+
T Consensus 515 ~~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~~-~~f~~~v~~~~-------------------------------- 561 (780)
T 3apo_A 515 VFNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLTP-STFNELVKQRK-------------------------------- 561 (780)
T ss_dssp EEETTEEEEECSCSCHHHHHHHHHHHHSCSEEECCH-HHHHHHTTTCC--------------------------------
T ss_pred EEcCCceeeecCcccHHHHHHHHHhhcccceeecCc-ccHHHHhhccC--------------------------------
Confidence 999997789999999999999999999877766653 45555442210
Q ss_pred cCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCCCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEe
Q 007882 253 TTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAV 332 (586)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~ 332 (586)
.....++.|..
T Consensus 562 ---------------------------------------------------------------------~~~~~lv~F~a 572 (780)
T 3apo_A 562 ---------------------------------------------------------------------HDEVWMVDFYS 572 (780)
T ss_dssp ---------------------------------------------------------------------TTCCEEEEEEC
T ss_pred ---------------------------------------------------------------------CCCeEEEEEEC
Confidence 00111222222
Q ss_pred c--cchhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCC---CcccCCC-CCCHHHH
Q 007882 333 S--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDA---KKHILDG-ELTLDKI 406 (586)
Q Consensus 333 ~--~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~---~~y~~~~-~~t~e~i 406 (586)
+ ..|..+.+.+.++|+.+++++.|+.+|++. ...++..+++.. .|.++++..+.. ....|.+ ..+.++|
T Consensus 573 p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~---~~~l~~~~~v~~--~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l 647 (780)
T 3apo_A 573 PWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQ---YHSFCTQENVQR--YPEIRFYPQKSSKAYQYHSYNGWNRDAYSL 647 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT---THHHHHHTTCCS--SSEEEEECCCSSSCCSCEECCCSCCSHHHH
T ss_pred CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcc---hHHHHHHcCCCC--CCeEEEEcCCCcCccchhhcCCCCCCHHHH
Confidence 2 457788899999999999999999999986 346788899976 688888866543 2345788 7899999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcE
Q 007882 407 KTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSI 486 (586)
Q Consensus 407 ~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i 486 (586)
.+|+.+... ..+..++.++|.+.+...+++++|.|||+||++|+.+.|.|+++++.+++ ++
T Consensus 648 ~~fi~~~~~-----------------~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~ 708 (780)
T 3apo_A 648 RSWGLGFLP-----------------QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG--KV 708 (780)
T ss_dssp HHHHHTTSC-----------------CCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TC
T ss_pred HHHHhhhcc-----------------cccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--Cc
Confidence 999998652 24778999999987778889999999999999999999999999999876 58
Q ss_pred EEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCcccccc----ccCHHHHHHHHHhcCC
Q 007882 487 VIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDV----DRTVVALYKFLKKNAS 542 (586)
Q Consensus 487 ~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~~ 542 (586)
.++.+|++.+. +..++|.++||+++|++|+.+. ++.| .++.+.|.+||.+++.
T Consensus 709 ~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---~~~G~~~g~~~~~~l~~~l~~~l~ 767 (780)
T 3apo_A 709 RAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 767 (780)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTT---EEEEEEECCCCHHHHHHHHHHHTT
T ss_pred eEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccc---cccCcccCCcCHHHHHHHHHHHHH
Confidence 89999988765 4789999999999999998764 4555 5799999999999874
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.97 E-value=1.8e-30 Score=247.52 Aligned_cols=223 Identities=35% Similarity=0.716 Sum_probs=187.9
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
...+..+++++|+.++.++++++|+|||+||++|+.+.|.|.++++.+++.+..+.++.|||++++.+|++|+|.++||+
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTI 93 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEE
Confidence 46799999999999999999999999999999999999999999999988655699999999999999999999999999
Q ss_pred EEEeCCeeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhccccCceeEE
Q 007882 172 YFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFY 251 (586)
Q Consensus 172 ~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~~~~~~~~F~ 251 (586)
++|++|....|.|.++.+.|.+|+.+.+.+....
T Consensus 94 ~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~---------------------------------------------- 127 (241)
T 3idv_A 94 KILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTP---------------------------------------------- 127 (241)
T ss_dssp EEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCC----------------------------------------------
T ss_pred EEEcCCCcccccCcccHHHHHHHHhhccCccccc----------------------------------------------
Confidence 9999997778999999888888886654321000
Q ss_pred ecCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCCCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEE
Q 007882 252 QTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFA 331 (586)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~ 331 (586)
T Consensus 128 -------------------------------------------------------------------------------- 127 (241)
T 3idv_A 128 -------------------------------------------------------------------------------- 127 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccchhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCCCCCCHHHHHHHHH
Q 007882 332 VSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGE 411 (586)
Q Consensus 332 ~~~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~~~~t~e~i~~fi~ 411 (586)
.|
T Consensus 128 -------------------------------------------------~~----------------------------- 129 (241)
T 3idv_A 128 -------------------------------------------------PP----------------------------- 129 (241)
T ss_dssp -------------------------------------------------CC-----------------------------
T ss_pred -------------------------------------------------cc-----------------------------
Confidence 00
Q ss_pred HHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEE
Q 007882 412 DFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAK 490 (586)
Q Consensus 412 ~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~i~~~~ 490 (586)
..+..++.++|+..+ ..+++++|+||++||++|+.+.|.|.++++.+.+. ..+.++.
T Consensus 130 ---------------------~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~ 187 (241)
T 3idv_A 130 ---------------------EVTLVLTKENFDEVV-NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAK 187 (241)
T ss_dssp ---------------------CSSEECCTTTHHHHH-HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEE
T ss_pred ---------------------ccceeccHHHHHHhh-ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEE
Confidence 012334445666655 44678999999999999999999999999998763 4588999
Q ss_pred EeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 491 MDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 491 id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+|++.+. +.+++|.++||+++|++|+.+ .|.|.++.+.|.+||.+++...
T Consensus 188 vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~----~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 188 VDATAETDLAKRFDVSGYPTLKIFRKGRPY----DYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEEETTEEE----ECCSCCSHHHHHHHHHHHTTCT
T ss_pred EECCCCHHHHHHcCCcccCEEEEEECCeEE----EecCCCCHHHHHHHHHhhhCCC
Confidence 9988765 578999999999999998765 5899999999999999988643
No 10
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=244.22 Aligned_cols=221 Identities=26% Similarity=0.502 Sum_probs=190.3
Q ss_pred CCCCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC--CcHHHHHHcCCC
Q 007882 90 IDDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEYDVQ 166 (586)
Q Consensus 90 ~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~ 166 (586)
.....|++|+.++|++.+ +.+++++|+|||+||++|+.+.|.|.++++.+.+ .+.++.|||+ ++..+|++|+|.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~---~~~~~~v~~d~~~~~~l~~~~~I~ 90 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG---VVQVAAVNCDLNKNKALCAKYDVN 90 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC---CcEEEEEEccCccCHHHHHhCCCC
Confidence 345679999999999999 4578999999999999999999999999999976 5899999998 678999999999
Q ss_pred CCcEEEEEeCCe------------------eeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEec
Q 007882 167 GFPTIYFFVDGQ------------------HKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLN 228 (586)
Q Consensus 167 ~~Pt~~~~~~g~------------------~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~ 228 (586)
++||+++|++|. ...|.|.++.+.|.+|+.+.+++.+..+.+.+++++|+...+.+.+++|.
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs 170 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFS 170 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEE
T ss_pred ccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEc
Confidence 999999999885 57899999999999999999999999999999999999886666666664
Q ss_pred CCCCcchHHHHHhc-cccCceeEEecCChhHHHhcCC-----CC---------------CCCCCeeEEeccCCcceeccc
Q 007882 229 SLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHL-----DS---------------KVNRPALVMVKKETEKISYFD 287 (586)
Q Consensus 229 ~~~~~~~~~f~~~~-~~~~~~~F~~~~~~~~~~~~~~-----~~---------------~~~~p~l~~~~~~~~~~~~y~ 287 (586)
. .......|..++ .+++.+.|+.+.+.+++..+++ +. ....|+|++|+..++.+..|.
T Consensus 171 ~-~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~ 249 (298)
T 3ed3_A 171 K-QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYE 249 (298)
T ss_dssp S-SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECC
T ss_pred C-CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEec
Confidence 3 455678888887 6889999999998887744422 10 024799999999888999999
Q ss_pred C-CCChhHHHHHHH--hcCCCceeecCCCc
Q 007882 288 G-KFDKSTIADFVF--SNKLPLVTIFTREN 314 (586)
Q Consensus 288 g-~~~~~~i~~fi~--~~~~p~v~~lt~~~ 314 (586)
| .++.++|.+||. .+..|++.++|..+
T Consensus 250 g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 250 GNSINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp CSSCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred cccCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 5 789999999999 88999999998865
No 11
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=221.64 Aligned_cols=230 Identities=20% Similarity=0.343 Sum_probs=180.8
Q ss_pred HhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhc-cccCceeEEecCChhHHHhcCCCCCCCCCeeEE
Q 007882 197 KKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 275 (586)
Q Consensus 197 ~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~ 275 (586)
+..+|++..|++.+++++|+..+++++|+||.+.++..+..|.+++ .+++++.|+++.+++++++++++. |+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~----p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS----EEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC----CcEEE
Confidence 4567889999999999999999999999999998888899999888 677999999999999999999973 89999
Q ss_pred eccC------Ccceecc-cCCCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEecc-----chhhHHHHH
Q 007882 276 VKKE------TEKISYF-DGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVSN-----DSEKLLPVF 343 (586)
Q Consensus 276 ~~~~------~~~~~~y-~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~l 343 (586)
|++. ++....| .|.++.++|.+||..+++|+|.++|.++...++.. +.+++++.... ..+.+...+
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHH
Confidence 9962 3567789 99999999999999999999999999999988543 34444333221 133588899
Q ss_pred HHHHHhccCc---eEEEEEECCCcccccccccccCc--cCCCCceEEEecCCCCCcccCCCCCCHHH--HHHHHHHHhcC
Q 007882 344 EEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGI--TGEAPKVLAYTGNDDAKKHILDGELTLDK--IKTFGEDFLEG 416 (586)
Q Consensus 344 ~~lA~~~~~~---~~f~~vd~~~~~~~~~~~~~~gi--~~~~~p~~~i~~~~~~~~y~~~~~~t~e~--i~~fi~~~~~g 416 (586)
+++|++|+++ +.|+|+|+.. ...++..||+ +..+.|.+++++. .+.+|.+.++++.+. |.+|++++++|
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~---~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HHHHHHccccCceEEEEEEchHH---HHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHHHCC
Confidence 9999999987 9999999875 2357899999 5577999999865 567888888899999 99999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeE
Q 007882 417 KLKPFFKSDPIPETNDGDVK 436 (586)
Q Consensus 417 kl~~~~ks~~~~~~~~~~v~ 436 (586)
+++|+++|+++|+.++++|+
T Consensus 232 kl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 232 NLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp CSCCCC--------------
T ss_pred CccccccCCCCCCCCCCCCC
Confidence 99999999999998777664
No 12
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.94 E-value=2.1e-26 Score=219.45 Aligned_cols=229 Identities=24% Similarity=0.382 Sum_probs=179.1
Q ss_pred hcCCCcccccchhHHHHhccc-CCeEEEEEecCCCCcchHHHHHhc-cccCceeEEecCChhHHHhcCCCCCCCCCeeEE
Q 007882 198 KIGPGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 275 (586)
Q Consensus 198 ~~~~~~~~i~~~~~l~~~~~~-~~~~~i~~~~~~~~~~~~~f~~~~-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~ 275 (586)
..+|++..|++.+++++|++. +++++||||.+.++.....|.+++ .+++++.|+++.+++++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 457889999999999999998 999999999998889999999988 678999999999999999999974 89999
Q ss_pred eccC------Ccceeccc--CCCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEec------cchhhHHH
Q 007882 276 VKKE------TEKISYFD--GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS------NDSEKLLP 341 (586)
Q Consensus 276 ~~~~------~~~~~~y~--g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~ 341 (586)
|++. ++....|. |.++.++|.+||..+++|+|.++|.+|...++. +.+.+++++..+ ...+.+..
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 9963 45567888 578999999999999999999999999998874 444444444322 22456889
Q ss_pred HHHHHHHhccCceEEEEEECCCcccccccccccCccCCC-CceEEEecCCCCCcccCC-CCCCHHHHHHHHHHHhcCCCC
Q 007882 342 VFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA-PKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLK 419 (586)
Q Consensus 342 ~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~-~p~~~i~~~~~~~~y~~~-~~~t~e~i~~fi~~~~~gkl~ 419 (586)
.++++|++|+ +++|+|+|+... ...++.||++... +|.+++++ ..+.+|.+. +++|.+.|.+|++++++|+++
T Consensus 158 ~~~~vAk~~k-ki~F~~~d~~~~---~~~l~~fgl~~~~~~p~~~~~~-~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~ 232 (250)
T 3ec3_A 158 KVLEVAKDFP-EYTFAIADEEDY---ATEVKDLGLSESGGDVNAAILD-ESGKKFAMEPEEFDSDALREFVMAFKKGKLK 232 (250)
T ss_dssp HHHHHHTTCT-TSEEEEEETTTT---HHHHHHTTCSSCSCSCEEEEEC-TTSCEEECCCCSCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhc-ceeEEEEcHHHH---HHHHHHcCCCccCCCcEEEEEc-CCCceecCCcccCCHHHHHHHHHHHHCCCcc
Confidence 9999999999 999999998652 3457899998643 45666665 456788887 689999999999999999999
Q ss_pred CCCCCCCCCCCCCCCeE
Q 007882 420 PFFKSDPIPETNDGDVK 436 (586)
Q Consensus 420 ~~~ks~~~~~~~~~~v~ 436 (586)
|++||+++|+.++++|.
T Consensus 233 p~~kSepiPe~~~~pV~ 249 (250)
T 3ec3_A 233 PVIKSQPVPKNNKGAAA 249 (250)
T ss_dssp CCC--------------
T ss_pred ceeecCCCCCCCCCCCC
Confidence 99999999998766653
No 13
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.91 E-value=1.8e-23 Score=196.20 Aligned_cols=212 Identities=20% Similarity=0.339 Sum_probs=185.9
Q ss_pred CCcccccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhccccCceeEEecCChhHHHhcCCCCCCCCCeeEEeccCC
Q 007882 201 PGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKET 280 (586)
Q Consensus 201 ~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 280 (586)
..+..+.+.+++++|+.++++++|+||.+.+......|.+++...+++.|+.+.+++++++++++. |+|++|+..+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~----p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS----SEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC----CeEEEEEecC
Confidence 357788999999999999999999999998899999999999555799999999999999999973 9999999877
Q ss_pred cceecccC----CCChhHHHHHHHhcCCCceeecCCCcccccccCCcccEEEEEEec--cchhhHHHHHHHHHHhccCce
Q 007882 281 EKISYFDG----KFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKL 354 (586)
Q Consensus 281 ~~~~~y~g----~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~l~~lA~~~~~~~ 354 (586)
+....|.| .++.+.|.+||..++.|+|.++|.+|+..++..+.+.++++|... .++..+...++++|++|++++
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i 164 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKI 164 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCE
Confidence 66777884 789999999999999999999999999999988888888878654 568889999999999999999
Q ss_pred EEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCC-CCCCHHHHHHHHHHHhcCC
Q 007882 355 IFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGK 417 (586)
Q Consensus 355 ~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~-~~~t~e~i~~fi~~~~~gk 417 (586)
.|+|+|++...+ ..++..||+.....|++++++..++.+|.+. +++|.++|.+|++++++|+
T Consensus 165 ~F~~vd~~~~~~-~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 165 LFILVDSGMKEN-GKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp EEEEEETTSGGG-HHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEeCCccHhH-HHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 999999975443 3567899998767999999987766677764 6899999999999999996
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.91 E-value=1.4e-23 Score=197.48 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=75.9
Q ss_pred CCcE-EEEEeCCCChhhhhhhHHHHHHHHHhcC--CCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccc
Q 007882 451 SKDV-LLEIYAPWCGHCQAFEPTYNKLAKHLRG--VDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD 525 (586)
Q Consensus 451 ~~~~-~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~ 525 (586)
++++ +|.||++||++|+.+.|.|+++++.+.. ..++.++.+|++.+. +..++|.++||+++|++|+... ++.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---~~~ 209 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRV---EFE 209 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEE---EEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeE---EEc
Confidence 4555 9999999999999999999999999872 236999999988765 4789999999999999988764 789
Q ss_pred cccCHHHHHHHHHhcC
Q 007882 526 VDRTVVALYKFLKKNA 541 (586)
Q Consensus 526 g~~~~~~l~~~i~~~~ 541 (586)
|.++.+.|.+||.+++
T Consensus 210 G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 210 GAYPEKMFLEKLLSAL 225 (226)
T ss_dssp SCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh
Confidence 9999999999998764
No 15
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.89 E-value=1.3e-22 Score=191.22 Aligned_cols=95 Identities=19% Similarity=0.222 Sum_probs=75.4
Q ss_pred hhHHHHH--hCCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 101 RNFSDVI--ENNKFVMVEFY-----APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 101 ~~~~~~~--~~~~~~lv~f~-----a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
+.+++++ +..++++|.|| ++||++|+.+.|.|.+++..+.+ ..++.++.|||+.++++|++|+|+++||+++
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-QDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-TTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-CCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 4556666 33455555555 89999999999999999988843 1279999999999999999999999999999
Q ss_pred EeCC-eeeeecCCCCHHHHHHHHH
Q 007882 174 FVDG-QHKAYNGGRTKDAIVTWIK 196 (586)
Q Consensus 174 ~~~g-~~~~~~g~~~~~~l~~~i~ 196 (586)
|++| ...+|.|..+.+.+..|+.
T Consensus 88 ~~~~~~~~~~~G~~~~~~l~~~~~ 111 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGLEFTTLIN 111 (229)
T ss_dssp ESSSCCCEEEESCCCTTHHHHHHH
T ss_pred ECCCcccceecCCccHHHHHHHHH
Confidence 9866 5678888777666665553
No 16
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.88 E-value=4.2e-21 Score=182.54 Aligned_cols=205 Identities=18% Similarity=0.299 Sum_probs=147.9
Q ss_pred CCCeEEeChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC--CCcHHHHHHcCCCCC
Q 007882 92 DKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA--TEENELAHEYDVQGF 168 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~--~~~~~l~~~~~i~~~ 168 (586)
...|..|++++|+..+. .+++++|+|||+||++|+.+.|.|.++++.+.+.+..+.|+.||| +++..+|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 35689999999998774 569999999999999999999999999999987555799999999 668999999999999
Q ss_pred cEEEEEeCC------eeeeecCCCCHHHHHHHHHHhcCCCcc---------cccchhHHHHhcccC-CeEEEEEecCCCC
Q 007882 169 PTIYFFVDG------QHKAYNGGRTKDAIVTWIKKKIGPGIY---------NITTLDEAERVLTSE-TKVVLGYLNSLVG 232 (586)
Q Consensus 169 Pt~~~~~~g------~~~~~~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~l~~~~~~~-~~~~i~~~~~~~~ 232 (586)
||+++|++| ....+.| .+.+.|.++|.+.+..... ...+.+++..|+..+ ...++.+|.+...
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~ 169 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS 169 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc
Confidence 999999874 3345555 7999999999988754321 234567888887543 2333344444333
Q ss_pred cchHHHHHhccccCceeEEecCC--hhHHHhcCCCCCCCCCeeEEeccCCcceeccc-CCCChhHHHHHHHh
Q 007882 233 SESEVLADASRLEDDVNFYQTTN--PDVAKIFHLDSKVNRPALVMVKKETEKISYFD-GKFDKSTIADFVFS 301 (586)
Q Consensus 233 ~~~~~f~~~~~~~~~~~F~~~~~--~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~-g~~~~~~i~~fi~~ 301 (586)
.....+.........+.+..+.+ ..++++|+++. .|+++++...+. ...++ +.-+.+.+..+++.
T Consensus 170 ~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~---~Pslvl~~~~g~-~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 170 YLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD---FPSCYLLFRNGS-VSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTSC-EEECCCSSSSHHHHHHHHHT
T ss_pred chHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC---CCeEEEEeCCCC-eEeeccccccHHHHHHHHHh
Confidence 22222222222234566665554 89999999985 899998887653 44444 33345566666543
No 17
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.85 E-value=9.2e-21 Score=153.74 Aligned_cols=98 Identities=29% Similarity=0.685 Sum_probs=86.0
Q ss_pred EEe-ChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 96 VVL-KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 96 ~~l-~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
.++ +.++|++.+. ++++++|+|||+||+||+.+.|.|.++++.+.+ +.|+.||++++++++++|+|+++||++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~vd~d~~~~l~~~~~V~~~PT~~ 78 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD----VVFLKVDVDECEDIAQDNQIACMPTFL 78 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEETTTCHHHHHHTTCCBSSEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC----eEEEEEecccCHHHHHHcCCCeecEEE
Confidence 344 4578998885 368999999999999999999999999988755 899999999999999999999999999
Q ss_pred EEeCCee-eeecCCCCHHHHHHHHHHh
Q 007882 173 FFVDGQH-KAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 173 ~~~~g~~-~~~~g~~~~~~l~~~i~~~ 198 (586)
+|++|+. .++.| .+.+.|.++|+++
T Consensus 79 ~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 79 FMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred EEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9999954 56677 6899999999875
No 18
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=4.4e-20 Score=159.52 Aligned_cols=114 Identities=39% Similarity=0.797 Sum_probs=105.4
Q ss_pred CCCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
....+..++.++|++.+..++++||+||++||++|+.+.|.|.++++.+.+.+..+.|+.||++++..++++|+|.++||
T Consensus 15 ~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp EETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 44679999999999999999999999999999999999999999999998755569999999999999999999999999
Q ss_pred EEEEeCCeeeeecCCCCHHHHHHHHHHhcCCCcc
Q 007882 171 IYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIY 204 (586)
Q Consensus 171 ~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~ 204 (586)
+++|++|+..+|.|..+.+.|.+||.+.+.+...
T Consensus 95 ~~~~~~G~~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 95 IKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp EEEEETTEEEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred EEEEECCcEEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 9999999877899999999999999999877654
No 19
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.84 E-value=4.9e-20 Score=156.18 Aligned_cols=107 Identities=21% Similarity=0.419 Sum_probs=95.9
Q ss_pred CCCeEEeChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC--CCceEEEEEeCCCcHHHHHHcCCCCC
Q 007882 92 DKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA--NESVVLAKVDATEENELAHEYDVQGF 168 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~~~l~~~~~i~~~ 168 (586)
...|..|++++|++.+. .+++++|+|||+||++|+.+.|.|.++++.+... ..++.++.|||++++++|++|+|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 45699999999999885 5899999999999999999999999999887532 34699999999999999999999999
Q ss_pred cEEEEEeCC-e--eeeecCCCCHHHHHHHHHHh
Q 007882 169 PTIYFFVDG-Q--HKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 169 Pt~~~~~~g-~--~~~~~g~~~~~~l~~~i~~~ 198 (586)
||+++|++| . ...|.|.++.+.|.+||.+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999877 3 26899999999999999875
No 20
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.83 E-value=7.8e-19 Score=182.92 Aligned_cols=206 Identities=17% Similarity=0.315 Sum_probs=148.6
Q ss_pred CCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC--cHHHHHHcCCCCC
Q 007882 92 DKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--ENELAHEYDVQGF 168 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~ 168 (586)
...|.++++++|+..+ ..+++++|+|||+||++|+.+.|.|.++++++++.+..+.|+.|||+. +.++|++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 3468999999999877 556999999999999999999999999999998755579999999964 7899999999999
Q ss_pred cEEEEEeC----C-eeeeecCCCCHHHHHHHHHHhcCCCc---------ccccchhHHHHhcccCC-eEEEEEecCCCCc
Q 007882 169 PTIYFFVD----G-QHKAYNGGRTKDAIVTWIKKKIGPGI---------YNITTLDEAERVLTSET-KVVLGYLNSLVGS 233 (586)
Q Consensus 169 Pt~~~~~~----g-~~~~~~g~~~~~~l~~~i~~~~~~~~---------~~i~~~~~l~~~~~~~~-~~~i~~~~~~~~~ 233 (586)
||+++|++ | ....+.|..+.+.|.++|.+.+.... ....+.+++..++.... ..++.+|.+....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s~ 170 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDSY 170 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCchH
Confidence 99999985 4 33567888999999999998875432 12234578888886543 3444444444433
Q ss_pred chHHHHHhccccCceeEEe--cCChhHHHhcCCCCCCCCCeeEEeccCCcceecccCCC-ChhHHHHHHHh
Q 007882 234 ESEVLADASRLEDDVNFYQ--TTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGKF-DKSTIADFVFS 301 (586)
Q Consensus 234 ~~~~f~~~~~~~~~~~F~~--~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~~-~~~~i~~fi~~ 301 (586)
....+.........+.+.. ..+..++++||++. .|+++++...+. ...+.... ...-+..++..
T Consensus 171 ~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~---~Pslvl~~~nGk-~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 171 LGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD---FPSCYLLLRNGS-VSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTSC-EEECCCSSCSHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC---CCeEEEEeCCCc-eeecccccccHHHHHHHHHH
Confidence 2222222223334455554 44568999999986 799999987653 33333322 23455666653
No 21
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.83 E-value=5.6e-20 Score=153.10 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=95.2
Q ss_pred CCCCeEEeChhhHHHHHhCCC-eEEEEEECCCC--hhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 91 DDKDVVVLKERNFSDVIENNK-FVMVEFYAPWC--GHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~-~~lv~f~a~wC--~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
.......+|+++|++.+.+++ ++||.|||+|| +||+.+.|.+.++++++.+ ++.|+.||.+++++++.+|+|++
T Consensus 13 ~~~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~---~v~~~KVdvDe~~~la~~ygV~s 89 (137)
T 2qsi_A 13 RPNAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG---RLVAAEVAAEAERGLMARFGVAV 89 (137)
T ss_dssp ----CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT---TEEEEEECGGGHHHHHHHHTCCS
T ss_pred HhcCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCcc
Confidence 345677999999999887665 99999999999 9999999999999999977 79999999999999999999999
Q ss_pred CcEEEEEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 168 FPTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 168 ~Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+||+++|++| ...+..|..+.+.|.++|.+++
T Consensus 90 iPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 90 CPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp SSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999 5568889999999999998876
No 22
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.82 E-value=6.7e-20 Score=154.65 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=90.1
Q ss_pred eEEeC-hhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 95 VVVLK-ERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 95 v~~l~-~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
+..|+ ..+|++.+. .++++||.|||+||+||+.+.|.|+++++++.+ .+.|+.||.++.++++.+|+|+++||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~---~v~f~kVDVDe~~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN---FCVIYLVDITEVPDFNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 44454 588998773 578999999999999999999999999999976 799999999999999999999999999
Q ss_pred EEEeCCeee----------eecCCCC-HHHHHHHHHHhc
Q 007882 172 YFFVDGQHK----------AYNGGRT-KDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~~~----------~~~g~~~-~~~l~~~i~~~~ 199 (586)
++|++|+.. +..|... .+.|.++|...+
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999999654 6889877 889999988776
No 23
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.81 E-value=2.1e-19 Score=148.57 Aligned_cols=104 Identities=27% Similarity=0.540 Sum_probs=97.0
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
++.++.++|++.+ .+++++|+||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||+++|
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6789999999999 889999999999999999999999999999876 699999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHhcCCC
Q 007882 175 VDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 175 ~~g~-~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++|+ ..++.|..+.+.|.+|+.+.++++
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 79 KDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9994 568999999999999999998765
No 24
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.81 E-value=4.8e-20 Score=154.15 Aligned_cols=107 Identities=12% Similarity=0.141 Sum_probs=97.1
Q ss_pred CeEEeChhhHHHHHhCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCc-eEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 94 DVVVLKERNFSDVIENNKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANES-VVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~lv~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
.+..+++++|++.+..++++||.|||+| |+||+.+.|.+.++++++.+ + +.|+.||.+++++++.+|+|+++||
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g---~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD---YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT---SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC---CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 5779999999999887889999999999 99999999999999999977 7 9999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCCc
Q 007882 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 171 ~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~~ 203 (586)
+++|++| ...+..|..+.+.|.++|.+.+..+.
T Consensus 95 lilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~ 128 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC---
T ss_pred EEEEECCEEEEEEecCCCHHHHHHHHHHHhcCCC
Confidence 9999999 55688899999999999998885543
No 25
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.81 E-value=3.2e-19 Score=147.29 Aligned_cols=105 Identities=24% Similarity=0.418 Sum_probs=97.0
Q ss_pred CCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..++.++|++.+ ..+++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||+++++.++++|+|.++||+
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 80 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE---SFGFYYVDVEEEKTLFQRFSLKGVPQI 80 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSCEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC---ceEEEEEECCcChhHHHhcCCCcCCEE
Confidence 358899999999999 7889999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 172 YFFVDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 172 ~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++|++| ...++.|..+.+.|.+||.+.++
T Consensus 81 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999999 45689999999999999988753
No 26
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.81 E-value=3.8e-19 Score=146.27 Aligned_cols=104 Identities=32% Similarity=0.642 Sum_probs=97.4
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..+++++|+.++.++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++.++.++++|+|.++||++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG---KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC---CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 4588999999999999999999999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+|++| ...++.|..+.+.|.++|.+++
T Consensus 81 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99999 5568999999999999998875
No 27
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=4.2e-19 Score=150.22 Aligned_cols=112 Identities=36% Similarity=0.642 Sum_probs=100.0
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
...++.+++++|++++++ .++|+||++||++|+.+.|.|.++++.+.+ .++.|+.||++++..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGED--LEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGG--GTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhcc--CCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 456999999999998754 389999999999999999999999998875 3599999999999999999999999999
Q ss_pred EEEeCCeeeeecCCCCHHHHHHHHHHhcCCCccccc
Q 007882 172 YFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNIT 207 (586)
Q Consensus 172 ~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~ 207 (586)
++|++|+..++.|..+.+.|.+||.+.+...+..+.
T Consensus 82 ~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 82 YHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEETTEEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEeCCeEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 999999878999999999999999998876655443
No 28
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.80 E-value=6e-19 Score=144.26 Aligned_cols=103 Identities=24% Similarity=0.498 Sum_probs=95.3
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..+++++|++.+ ++++++|+||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEG---KADILKLDVDENPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CcEEEEEECCcCHHHHHhCCCcccCEEE
Confidence 357899999999999 889999999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++++| ...++.|..+.+.+.++|.+.+
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 99999 5568999999999999998753
No 29
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.80 E-value=5.4e-19 Score=145.89 Aligned_cols=105 Identities=34% Similarity=0.745 Sum_probs=95.6
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..+++++|++.+. +++++|+||++||++|+.+.|.|.++++.+......+.++.||++.++.++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 4689999999999998 789999999999999999999999999887654347999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHh
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+|++| ...++.|..+.+.|.+||.+.
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999 556899999999999999875
No 30
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.80 E-value=7.2e-19 Score=144.36 Aligned_cols=104 Identities=23% Similarity=0.598 Sum_probs=94.8
Q ss_pred CCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..++.++|+..+ ..+++++|+||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||+
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 468899999999655 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|++|+ ..++.|..+.+.|.++|.+.+
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999994 567899999999999998865
No 31
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.80 E-value=1.4e-19 Score=151.65 Aligned_cols=110 Identities=55% Similarity=1.065 Sum_probs=101.3
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..++.++|++++.++++++|.||++||++|+.+.|.|.++++.+++.+.++.++.||+++++.++++|+|.++||++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 86 (120)
T 1mek_A 7 DHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIK 86 (120)
T ss_dssp TTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEE
T ss_pred CCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEE
Confidence 46899999999999999999999999999999999999999999998765557999999999999999999999999999
Q ss_pred EEeCCe-e--eeecCCCCHHHHHHHHHHhcCCC
Q 007882 173 FFVDGQ-H--KAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 173 ~~~~g~-~--~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
+|++|. . ..|.|..+.+.|.+||.+.++++
T Consensus 87 ~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 87 FFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999883 3 78999999999999999988765
No 32
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.80 E-value=5.4e-19 Score=144.31 Aligned_cols=102 Identities=26% Similarity=0.563 Sum_probs=93.9
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
++.+++++|+.++..+++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||+++++.++++|+|.++||++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 67899999998888899999999999999999999999999998876 699999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 175 VDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 175 ~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|+ ..++.|..+.+.+.++|.+.+
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 9994 567899999999999987654
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=9.1e-19 Score=149.71 Aligned_cols=110 Identities=45% Similarity=0.805 Sum_probs=97.9
Q ss_pred CCCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC-CCceEEEEEeCCCcHHHHHHcCCCCC
Q 007882 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA-NESVVLAKVDATEENELAHEYDVQGF 168 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~~~~l~~~~~i~~~ 168 (586)
....+..++..+|++.+ ..++++||+||++||++|+.+.|.|.++++.++.. ..++.|+.||++.++.++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 34568999999999876 66899999999999999999999999999998721 12699999999999999999999999
Q ss_pred cEEEEEeCC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 169 PTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 169 Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
||+++|++| ...+|.|..+.+.|.+||.+.+.
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 999999999 56789999999999999998774
No 34
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.79 E-value=9.1e-19 Score=153.41 Aligned_cols=107 Identities=29% Similarity=0.609 Sum_probs=98.3
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
...++.+++.+|++.+..+++++|+||++||++|+.+.|.|.++++++.+ ++.|+.||+++++.++++|+|+++||+
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~---~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG---QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC---CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 34688999999999997789999999999999999999999999999976 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
++|++|+ ..++.|..+.+.|.+||.+.++.
T Consensus 123 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999994 56799999999999999998764
No 35
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.79 E-value=4.5e-19 Score=147.44 Aligned_cols=101 Identities=24% Similarity=0.563 Sum_probs=91.6
Q ss_pred CeEEeChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 94 DVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
.....+.++|++++. ++++++|+||++||++|+.+.|.|.++++++++ +.|+.||+++++.++++|+|.++||+
T Consensus 13 ~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 13 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp CBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred ccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCccccEE
Confidence 355677999999998 899999999999999999999999999988755 99999999999999999999999999
Q ss_pred EEEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|++| ...++.|. +.+.|.++|.+.+
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999 55678888 9999999998764
No 36
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.79 E-value=1.2e-18 Score=143.31 Aligned_cols=105 Identities=29% Similarity=0.593 Sum_probs=96.2
Q ss_pred CeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 94 DVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
.+..+++++|+++++.+++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++.++++|+|.++||+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 478999999999998899999999999999999999999999999876 69999999999999999999999999999
Q ss_pred EeCCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 174 FVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 174 ~~~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
|++|+ ...+.|..+.+.+.+|+.+.++.
T Consensus 79 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 99994 56799999999999999988753
No 37
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.79 E-value=8.1e-19 Score=151.26 Aligned_cols=108 Identities=26% Similarity=0.456 Sum_probs=98.6
Q ss_pred CCCCeEEeChhhHH-HHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 91 DDKDVVVLKERNFS-DVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 91 ~~~~v~~l~~~~~~-~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
....+..+++++|. .++..+++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.||+++++.++++|+|.++|
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 80 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS---SAVFGRINIATNPWTAEKYGVQGTP 80 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEETTTCHHHHHHHTCCEES
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC---ceEEEEEECCcCHhHHHHCCCCcCC
Confidence 34579999999999 5667789999999999999999999999999999877 6999999999999999999999999
Q ss_pred EEEEEeCC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 170 TIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 170 t~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
|+++|++| ...++.|..+.+.|.+||.+.+..
T Consensus 81 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 81 TFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEEEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 99999999 456899999999999999988743
No 38
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.79 E-value=1.3e-18 Score=149.20 Aligned_cols=109 Identities=28% Similarity=0.553 Sum_probs=98.6
Q ss_pred CCCCeEEeChhhHHHHHh------------CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH
Q 007882 91 DDKDVVVLKERNFSDVIE------------NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE 158 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~------------~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 158 (586)
....++.++..+|.+.+. .+++++|+||++||++|+.+.|.|.++++.+++ ++.++.||+++++.
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~ 83 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG---QIVIYKVDTEKEQE 83 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CEEEEEEeCCCCHH
Confidence 345689999999998875 468999999999999999999999999999876 69999999999999
Q ss_pred HHHHcCCCCCcEEEEE-eCCeeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 159 LAHEYDVQGFPTIYFF-VDGQHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 159 l~~~~~i~~~Pt~~~~-~~g~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++++|+|.++||+++| ++|+...+.|..+.+.|.+||.+.++..
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhcc
Confidence 9999999999999999 6886668999999999999999987543
No 39
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.79 E-value=6.6e-19 Score=163.16 Aligned_cols=115 Identities=26% Similarity=0.640 Sum_probs=105.1
Q ss_pred CCCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
+...+..+++.+|+..+..++++||+||++||++|+.+.|.|.++++.+++ .+.|+.|||++++.+|++|+|.++||
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 171 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVNSYPS 171 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCccHHHHHHcCCCcCCe
Confidence 345689999999999998899999999999999999999999999999876 69999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCCcccccc
Q 007882 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGIYNITT 208 (586)
Q Consensus 171 ~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 208 (586)
+++|++| ...++.|..+.+.|.+||.+.+++.+..|++
T Consensus 172 ~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 172 LFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp EEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred EEEEECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 9999999 5678999999999999999999888877653
No 40
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.79 E-value=1.5e-18 Score=151.22 Aligned_cols=107 Identities=25% Similarity=0.638 Sum_probs=99.5
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
...+..++.++|++.+..+++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.||+++++.++++|+|.++||+
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG---KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC---ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 45689999999999998899999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 172 YFFVDG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 172 ~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
++|++| ...++.|..+.+.|.+||.+.+..
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999 456899999999999999988754
No 41
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.79 E-value=2.4e-18 Score=140.94 Aligned_cols=103 Identities=24% Similarity=0.617 Sum_probs=94.3
Q ss_pred CCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..+++++|++.+ ..+++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||+++++.++++|+|.++||+
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDNPETPNAYQVRSIPTL 78 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCCHHHHHhcCCCccCEE
Confidence 458899999999766 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHh
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~ 198 (586)
++|++|+ ..++.|..+.+.+.+||.+.
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999994 56789999999999999875
No 42
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.79 E-value=1.9e-18 Score=141.98 Aligned_cols=100 Identities=27% Similarity=0.531 Sum_probs=90.0
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
....+..+|++++.++++++|+||++||++|+.+.|.|.++++++.+ +.|+.||+++++.++++|+|.++||+++|
T Consensus 9 ~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp EECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 44567899999999999999999999999999999999999998854 99999999999999999999999999999
Q ss_pred eCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 175 VDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 175 ~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++| ...++.|. +.+.|.++|.+.+
T Consensus 85 ~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 999 44677887 7799999998753
No 43
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.78 E-value=9.8e-19 Score=148.11 Aligned_cols=109 Identities=27% Similarity=0.472 Sum_probs=96.6
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CCcEEEEEEeCCccc--cccCCCCcC
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
.+.+..+++++|++.+.+.+++++|.|||+||++|+.+.|.|+++++.+.. ...+.++.+|++.+. +.+++|+++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 467899999999999877789999999999999999999999999987752 247999999998874 478999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
||+++|++|+.. .+..|.|.++.+.|.+||.+++
T Consensus 94 Pt~~~~~~g~~~-~~~~~~G~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 94 PTMRYYTRIDKQ-EPFEYSGQRYLSLVDSFVFQNT 127 (127)
T ss_dssp SEEEEECSSCSS-SCEECCSCCCHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCC-CceEecCCccHHHHHHHHHhcC
Confidence 999999998875 4678999999999999998864
No 44
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.78 E-value=2.2e-18 Score=151.33 Aligned_cols=112 Identities=17% Similarity=0.308 Sum_probs=96.2
Q ss_pred CCCeEEeChhhHHHHHhC--CCeEEEEEEC-------CCChhhhhhhHHHHHHHHHhhcC--CCceEEEEEeCCCcHHHH
Q 007882 92 DKDVVVLKERNFSDVIEN--NKFVMVEFYA-------PWCGHCQALAPEYAAAATELKSA--NESVVLAKVDATEENELA 160 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~a-------~wC~~C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~~~l~ 160 (586)
...++.||+++|++++.. +.++||.||| +||+||+.+.|.|+++++.+... +.++.|+.||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 456999999999998854 4579999999 49999999999999999998721 127999999999999999
Q ss_pred HHcCCCCCcEEEEEeCC--ee-----------eee---cC-CCCHHHHHHHHHHhcCCCc
Q 007882 161 HEYDVQGFPTIYFFVDG--QH-----------KAY---NG-GRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 161 ~~~~i~~~Pt~~~~~~g--~~-----------~~~---~g-~~~~~~l~~~i~~~~~~~~ 203 (586)
++|+|+++||+++|++| .. ..| .| +++.+.|.+||.+.++..+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc
Confidence 99999999999999987 22 345 35 8999999999999998655
No 45
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.78 E-value=2.2e-18 Score=144.08 Aligned_cols=110 Identities=29% Similarity=0.578 Sum_probs=97.0
Q ss_pred CCCCCCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC
Q 007882 88 PEIDDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (586)
Q Consensus 88 ~~~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 166 (586)
+.-....+..+++++|++.+ +.+++++|+||++||++|+.+.|.|.++++++.+ ++.++.||++++..++++|+|.
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 84 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDDHTDLAIEYEVS 84 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTTTHHHHHHTTCC
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCCC
Confidence 33345678999999999865 6688999999999999999999999999998866 6999999999999999999999
Q ss_pred CCcEEEEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 167 GFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 167 ~~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++||+++|++|+ ..++.|..+.+.|.+||.+.++
T Consensus 85 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 85 AVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 999999999994 5688999999999999988753
No 46
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=1.5e-18 Score=150.00 Aligned_cols=107 Identities=29% Similarity=0.593 Sum_probs=96.1
Q ss_pred CCCCeEEeChhhHHHHHhC------------CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH
Q 007882 91 DDKDVVVLKERNFSDVIEN------------NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE 158 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~------------~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 158 (586)
....+..++..+|...+.. +++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++.++.
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG---KIYIYKVNVDKEPE 96 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC---ceEEEEEECCCCHH
Confidence 3456899999999988854 79999999999999999999999999999876 69999999999999
Q ss_pred HHHHcCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhcC
Q 007882 159 LAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 159 l~~~~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++++|+|.++||+++|+ +|....+.|..+.+.|.++|.+.+.
T Consensus 97 ~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 97 LARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999999999999995 6776799999999999999998764
No 47
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.78 E-value=2.7e-18 Score=139.75 Aligned_cols=102 Identities=30% Similarity=0.632 Sum_probs=94.2
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
|+.+++++|++.+.++++++|.||++||++|+.+.|.|.++++.+++ +.++.||++.++.++++|+|.++||+++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 46789999999998899999999999999999999999999988755 99999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 175 VDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 175 ~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++|+ ..++.|..+.+.+.+|+.+.++
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9994 4689999999999999998764
No 48
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.78 E-value=1.3e-18 Score=147.21 Aligned_cols=104 Identities=22% Similarity=0.563 Sum_probs=94.8
Q ss_pred CCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..++.++.++|+..+ ..+++++|+||++||++|+.+.|.|.++++.+++ ++.|+.||+++++.++++|+|.++||+
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 358899999999654 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|++|+ ..++.|..+.+.|.+||.+.+
T Consensus 99 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 LLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999994 567999999999999998865
No 49
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.78 E-value=2.9e-18 Score=140.46 Aligned_cols=103 Identities=31% Similarity=0.622 Sum_probs=93.9
Q ss_pred CeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 94 DVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 94 ~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
.+..+++++|++.+ ..+++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++.++.++++|+|.++||++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD---KLKCVKLNTDESPNVASEYGIRSIPTIM 78 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHHTCCSSCEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC---ceEEEEEECCCCHHHHHHCCCCcCCEEE
Confidence 36789999999866 5689999999999999999999999999998876 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++++| ...++.|..+.+.+.++|.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99988 5568899999999999998875
No 50
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.78 E-value=3.9e-19 Score=145.08 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=76.9
Q ss_pred ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCC-
Q 007882 99 KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDG- 177 (586)
Q Consensus 99 ~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g- 177 (586)
+.++|++.++++++++|+|||+||++|+.+.|.|.++++.+. ++.++.||+++++.++++|+|.++||+++|++|
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 345666677788999999999999999999999999999873 499999999999999999999999999999999
Q ss_pred eeeeecCCCCHHHHHHHHHHhc
Q 007882 178 QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 178 ~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
...++.|..+.+.|.++|.+++
T Consensus 83 ~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcCHHHHHHHHHHhh
Confidence 4568899999999999998764
No 51
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.78 E-value=3.4e-18 Score=141.31 Aligned_cols=104 Identities=30% Similarity=0.574 Sum_probs=94.3
Q ss_pred CeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 94 DVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 94 ~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
.+..+++++|.+.+ +++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++.++.++++|+|.++||++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 47899999998655 5689999999999999999999999999999866 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++++| ...++.|..+.+.+.++|.+.+.
T Consensus 83 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999 45688999999999999988763
No 52
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.78 E-value=4.2e-18 Score=141.49 Aligned_cols=105 Identities=23% Similarity=0.532 Sum_probs=96.1
Q ss_pred CCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..+++++|+..+ ..+++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++.++.++++|+|.++||+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD---RLKVVKLEIDPNPTTVKKYKVEGVPAL 83 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEESTTCHHHHHHTTCCSSSEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC---cEEEEEEEcCCCHHHHHHcCCCceeEE
Confidence 458999999999775 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++|++|. ..++.|..+.+.+.+||.+.++
T Consensus 84 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 84 RLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 9999994 4678999999999999998765
No 53
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.78 E-value=4e-18 Score=140.64 Aligned_cols=104 Identities=24% Similarity=0.465 Sum_probs=91.8
Q ss_pred CCCCeEEeChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-CcHHHHHHcCCCC
Q 007882 91 DDKDVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQG 167 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~ 167 (586)
..+.+..++.++|++.+. ++++++|+||++||++|+.+.|.|.++++.+++ +.|+.||++ .+..++++|+|.+
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~~~~~~~~~~v~~ 78 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRV 78 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSB
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcchHHHHHHcCCCe
Confidence 345789999999999986 589999999999999999999999999988754 999999998 7899999999999
Q ss_pred CcEEEEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 168 FPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 168 ~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+||++++++|+ ..++.|. ..+.|.++|.+.+
T Consensus 79 ~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 79 VPTFKILKENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp SSEEEEESSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred eeEEEEEeCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 99999889994 4577787 4889999998764
No 54
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.6e-18 Score=147.55 Aligned_cols=106 Identities=43% Similarity=0.780 Sum_probs=96.1
Q ss_pred CCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 92 DKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
...+..++.++|+..+ ..+++++|+||++||++|+.+.|.|.++++.+++ .+.|+.||++++..++++|+|.++||
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD---VVKVGAVNADKHQSLGGQYGVQGFPT 92 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC---ceEEEEEeCCCCHHHHHHcCCCccCE
Confidence 3568999999999855 6789999999999999999999999999999876 69999999999999999999999999
Q ss_pred EEEEeCC-e-eeeecCCCCHHHHHHHHHHhcC
Q 007882 171 IYFFVDG-Q-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 171 ~~~~~~g-~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+++|++| . ...|.|..+.+.|.+|+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 93 IKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9999866 4 7889999999999999988763
No 55
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.77 E-value=3.7e-18 Score=139.78 Aligned_cols=101 Identities=21% Similarity=0.424 Sum_probs=87.9
Q ss_pred eEEe-ChhhHHHHH--hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 95 VVVL-KERNFSDVI--ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 95 v~~l-~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
+..+ +.++|++.+ .++++++|+||++||++|+.+.|.|.++++.+. ++.|+.||+++++.++++|+|.++||+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHhcCCCcccEE
Confidence 4555 578999988 568999999999999999999999999999883 499999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++|++|+ ..++.|. ..+.|.++|.+.++
T Consensus 79 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 79 QFFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEeCC-CHHHHHHHHHHhcC
Confidence 9999994 4578885 45569999988753
No 56
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.77 E-value=3.8e-18 Score=143.59 Aligned_cols=101 Identities=24% Similarity=0.420 Sum_probs=92.3
Q ss_pred eEEeCh-hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 95 VVVLKE-RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 95 v~~l~~-~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
+..++. ++|++.+..+++++|.||++||++|+.+.|.|.++++.+. ++.|+.||+++++.++++|+|.++||+++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 788998 9999999989999999999999999999999999999873 49999999999999999999999999999
Q ss_pred EeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 174 FVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 174 ~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
|++|. ...+.| .+.+.|.++|.+.+.
T Consensus 97 ~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99994 457888 688999999988763
No 57
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.77 E-value=5.7e-18 Score=139.94 Aligned_cols=103 Identities=23% Similarity=0.538 Sum_probs=92.7
Q ss_pred CeEEe-ChhhHHHHHhC----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCC
Q 007882 94 DVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGF 168 (586)
Q Consensus 94 ~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 168 (586)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++.++.++++|+|.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVAAVAEAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTHHHHHHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchHHHHHHcCCCcc
Confidence 47778 57899999875 89999999999999999999999999999875 699999999999999999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 169 Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
||++++++|+ ..++.|. +.+.|.++|.+.+.
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 PTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred cEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 9999999994 4678888 99999999988763
No 58
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.77 E-value=5.3e-18 Score=140.09 Aligned_cols=103 Identities=27% Similarity=0.582 Sum_probs=93.3
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
......++.++|+++++.+++++|+||++||++|+.+.|.|.++++.+.+ +.|+.||+++++.++++|+|.++||+
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~----v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK----MVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC----CEEEEEECCCCHHHHHHcCCCcccEE
Confidence 34578899999999999999999999999999999999999999988753 99999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+++++|+ ..++.|. +.+.|.++|.+.+
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999994 4678888 9999999998764
No 59
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.76 E-value=2.3e-18 Score=144.73 Aligned_cols=106 Identities=26% Similarity=0.536 Sum_probs=94.0
Q ss_pred CCeEEeChhhHH-HHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKERNFS-DVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~~~~~-~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
+.+..++.++|. .++..+++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||+++++.++++|+|.++||+
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 79 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAYPQTCQKAGIKAYPSV 79 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCCHHHHHHcCCCccceE
Confidence 458899999996 4667789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCC-eeeeecCC----CCHHHHHHHHHHhcCC
Q 007882 172 YFFVDG-QHKAYNGG----RTKDAIVTWIKKKIGP 201 (586)
Q Consensus 172 ~~~~~g-~~~~~~g~----~~~~~l~~~i~~~~~~ 201 (586)
++|++| ...++.|. .+.+.|.+||.+.+..
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 999755 55566665 8999999999988743
No 60
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.76 E-value=1.1e-15 Score=154.24 Aligned_cols=301 Identities=17% Similarity=0.299 Sum_probs=222.7
Q ss_pred CCCeEEe-ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 92 DKDVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 92 ~~~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
+..+..| +.+++++++...+.++|.|+.+-+..+ ...|.++|+.+ + .+.|+.+ .+.++|+++++.. |+
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~---~~~F~~t---~~~~v~~~~~v~~-~~ 84 (361)
T 3uem_A 16 SEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-D---DIPFGIT---SNSDVFSKYQLDK-DG 84 (361)
T ss_dssp CSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-S---SSCEEEE---CCHHHHHHTTCSS-SE
T ss_pred cccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-C---CceEEEE---CcHHHHHHhCCCC-Ce
Confidence 3456667 458899999999999999998766655 46889999887 4 4777755 4689999999988 99
Q ss_pred EEEEeC--CeeeeecCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCC-eEEEEEecCCCCc---chHHHHHhc-c
Q 007882 171 IYFFVD--GQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSET-KVVLGYLNSLVGS---ESEVLADAS-R 243 (586)
Q Consensus 171 ~~~~~~--g~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~-~~~i~~~~~~~~~---~~~~f~~~~-~ 243 (586)
+++|+. +....|.|..+.+.|.+||.....|.+..++. +.+.++..+.. ..++.|+...... ....|..++ .
T Consensus 85 i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~ 163 (361)
T 3uem_A 85 VVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAES 163 (361)
T ss_dssp EEEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGG
T ss_pred EEEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHH
Confidence 999975 46788999999999999999999998888765 55666665544 3445555443322 234566666 6
Q ss_pred ccCceeEEecC-----ChhHHHhcCCCCCCCCCeeEEeccCCcceeccc---CCCChhHHHHHHHhcCC-----------
Q 007882 244 LEDDVNFYQTT-----NPDVAKIFHLDSKVNRPALVMVKKETEKISYFD---GKFDKSTIADFVFSNKL----------- 304 (586)
Q Consensus 244 ~~~~~~F~~~~-----~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~---g~~~~~~i~~fi~~~~~----------- 304 (586)
+++.+.|+.+. .+.+++.||+.. ...|++++++..+. ...|. |.++.+.|.+|+....-
T Consensus 164 ~~~~i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~ 241 (361)
T 3uem_A 164 FKGKILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQE 241 (361)
T ss_dssp GTTTCEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCC
T ss_pred ccCceEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCC
Confidence 77788898754 456899999973 23799999987432 23333 78899999999987421
Q ss_pred -------CceeecCCCcccccccCCcccEEEEEEec--cchhhHHHHHHHHHHhccCc--eEEEEEECCCcccccccccc
Q 007882 305 -------PLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGK--LIFVYVQMDNEDVGKPVSEY 373 (586)
Q Consensus 305 -------p~v~~lt~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~l~~lA~~~~~~--~~f~~vd~~~~~~~~~~~~~ 373 (586)
..+..++..++..+.....+.+++.|..+ ..|+...+.|.++|.+|.++ +.++.+|++... +..
T Consensus 242 ~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~-----~~~ 316 (361)
T 3uem_A 242 LPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE-----VEA 316 (361)
T ss_dssp CCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-----CSS
T ss_pred CCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-----hhh
Confidence 13667788888876543334445545444 78999999999999999875 999999987643 567
Q ss_pred cCccCCCCceEEEecCC-CCCcccCCCCCCHHHHHHHHHHH
Q 007882 374 FGITGEAPKVLAYTGND-DAKKHILDGELTLDKIKTFGEDF 413 (586)
Q Consensus 374 ~gi~~~~~p~~~i~~~~-~~~~y~~~~~~t~e~i~~fi~~~ 413 (586)
+++.. .|.++++..+ +.....+.|..+.+.|.+|+++-
T Consensus 317 ~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 317 VKVHS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp CCCCS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred cCCcc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 88865 6888888555 44567788999999999999764
No 61
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.76 E-value=1.8e-16 Score=158.86 Aligned_cols=305 Identities=17% Similarity=0.171 Sum_probs=225.7
Q ss_pred cccccchhHHHHhcccCCeEEEEEecCCCCc--chHH-------HHHhc-cccC-ceeEEec---CChhHHHhcCCCCCC
Q 007882 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGS--ESEV-------LADAS-RLED-DVNFYQT---TNPDVAKIFHLDSKV 268 (586)
Q Consensus 203 ~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~--~~~~-------f~~~~-~~~~-~~~F~~~---~~~~~~~~~~~~~~~ 268 (586)
+..+ +.+++++.+.+++.++|-|+.+++.. .... |..++ .+.. .+.|+.+ ..+.+++++++..
T Consensus 13 v~~l-~~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~-- 89 (350)
T 1sji_A 13 VVSL-TEKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDE-- 89 (350)
T ss_dssp CEEE-CHHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCS--
T ss_pred cEEC-CHHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCc--
Confidence 4444 44778888888888899999888752 2223 66655 3444 5888765 4678999999986
Q ss_pred CCCeeEEeccCCcceecccCCCChhHHHHHHHhcCCCceeecC-CCccccccc-CCcccEEEEEEeccchhhHHHHHHHH
Q 007882 269 NRPALVMVKKETEKISYFDGKFDKSTIADFVFSNKLPLVTIFT-RENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFEEA 346 (586)
Q Consensus 269 ~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~l 346 (586)
.|++++|+... ...|.|..+.+.|.+|+.....|.+..++ .+++..+.. ... ..++.|.... +......+.++
T Consensus 90 -~Pt~~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~vv~ff~~~-~~~~~~~~~~~ 164 (350)
T 1sji_A 90 -EGSLYVLKGDR--TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQ-IKLIGFFKSE-ESEYYKAFEEA 164 (350)
T ss_dssp -TTEEEEEETTE--EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSS-CEEEEECSCT-TSHHHHHHHHH
T ss_pred -cceEEEEECCc--EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCC-cEEEEEECCC-CcHHHHHHHHH
Confidence 89999997544 67899999999999999999999999985 456666654 333 3445444432 34456789999
Q ss_pred HHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCCCC-CCHHHHHHHHHHHhcCCCCCCCCCC
Q 007882 347 AKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFKSD 425 (586)
Q Consensus 347 A~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~~~-~t~e~i~~fi~~~~~gkl~~~~ks~ 425 (586)
|..+++++.|+.+. ...+++.+|++ .|.++++.........|.+. .+.++|.+|+.....
T Consensus 165 A~~~~~~~~f~~~~------~~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~---------- 225 (350)
T 1sji_A 165 AEHFQPYIKFFATF------DKGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR---------- 225 (350)
T ss_dssp HHHTTTTSEEEEEC------CHHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC----------
T ss_pred HHhhccCcEEEEEC------CHHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc----------
Confidence 99999999999885 23578889997 57777776644455567775 899999999987432
Q ss_pred CCCCCCCCCeEEEeCcchhHHhhccC-CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--c----
Q 007882 426 PIPETNDGDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H---- 498 (586)
Q Consensus 426 ~~~~~~~~~v~~l~~~~f~~~v~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~---- 498 (586)
+.+..++.+++.......- +..++.|+.+||+.|..+.+.++++|+.+++..++.|+.+|+.... +
T Consensus 226 -------p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~ 298 (350)
T 1sji_A 226 -------PTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWE 298 (350)
T ss_dssp -------CSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHH
T ss_pred -------cchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHH
Confidence 3578899999988653322 4456679999999999999999999999985346889999987654 2
Q ss_pred ccCCCC-cCcEEEEEeCCCcccCccc--c---ccccCHHHHHHHHHhcCCC
Q 007882 499 HRAKSD-GFPTILFFPAGNKSFDPIN--V---DVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 499 ~~~~i~-~~Pt~~~~~~g~~~~~~~~--~---~g~~~~~~l~~~i~~~~~~ 543 (586)
..+++. .+|+++++...+.. + .. + .+..+.+.|.+|+.+...-
T Consensus 299 ~~~gi~~~~P~~~i~~~~~~~-~-~~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 299 KTFKIDLFKPQIGVVNVTDAD-S-VWMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp HHCCSCTTSCEEEEEESSSSC-E-EESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred hhcCCCccCCcEEEEeccccc-c-cccCCCcccccCCHHHHHHHHHHHhcC
Confidence 457787 58999999753321 1 12 2 2478999999999987643
No 62
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.76 E-value=7.3e-18 Score=137.48 Aligned_cols=102 Identities=28% Similarity=0.642 Sum_probs=92.6
Q ss_pred eEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 95 VVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 95 v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
|..+++++|++.+ ..+++++|.||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||+++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG---KIAVYKLNTDEAPGIATQYNIRSIPTVLF 78 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC---ceEEEEEcCcchHHHHHhCCCCcccEEEE
Confidence 6788999999866 4678999999999999999999999999998876 69999999999999999999999999999
Q ss_pred EeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 174 FVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 174 ~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+++|+ ..++.|..+.+.+.++|.+.+
T Consensus 79 ~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 79 FKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 99994 567899999999999998763
No 63
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.76 E-value=7.3e-18 Score=139.28 Aligned_cols=102 Identities=20% Similarity=0.455 Sum_probs=87.6
Q ss_pred eEEeCh-hhHHHHHhC---CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 95 VVVLKE-RNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 95 v~~l~~-~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
+..++. ++|++.+.. +++++|+||++||++|+.+.|.|.++++.++. .++.|+.||+++++.++++|+|.++||
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN--SNVSFLSIDADENSEISELFEISAVPY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG--TTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC--CCEEEEEEecccCHHHHHHcCCCcccE
Confidence 677887 999999976 89999999999999999999999999998644 259999999999999999999999999
Q ss_pred EEEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 171 IYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 171 ~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+++|++|+ ..++.|. ..+.|.++|.+.+
T Consensus 80 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 80 FIIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 99999995 4567786 4556999998765
No 64
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.76 E-value=1.3e-17 Score=136.22 Aligned_cols=101 Identities=29% Similarity=0.654 Sum_probs=90.6
Q ss_pred eEEeCh-hhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 95 VVVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 95 v~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
+..+++ ++|++.+. ++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECEDIAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchHHHHHHcCCCcccEE
Confidence 467777 89999887 789999999999999999999999999998864 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+++++|+ ..++.| .+.+.+.++|.+.+
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 9999994 567888 78899999998753
No 65
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.76 E-value=6.7e-18 Score=141.65 Aligned_cols=114 Identities=46% Similarity=0.853 Sum_probs=98.4
Q ss_pred CCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CCcEEEEEEeCCccccccCCCCc
Q 007882 429 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHHRAKSDG 505 (586)
Q Consensus 429 ~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~i~~~~id~~~~~~~~~~i~~ 505 (586)
+...+.+..+++++|.+.+...+++++|+||++||++|+.+.|.|+++++.+.+ ...+.++.+|++.+...+ +|.+
T Consensus 3 ~~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~ 81 (121)
T 2djj_A 3 LGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQG 81 (121)
T ss_dssp CCCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSS
T ss_pred ccCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCc
Confidence 345678999999999998767789999999999999999999999999999876 236999999999877656 9999
Q ss_pred CcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 506 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 506 ~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+||+++|++|.++ ...++.|.++.+.|.+||++++...
T Consensus 82 ~Pt~~~~~~~~~~-~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 FPTIKLYPAGAKG-QPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSEEEEECSSCTT-SCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred CCeEEEEeCcCCC-CceEecCCCCHHHHHHHHHhccCcC
Confidence 9999999888652 2347899999999999999988754
No 66
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.75 E-value=7.6e-18 Score=141.32 Aligned_cols=107 Identities=30% Similarity=0.586 Sum_probs=95.3
Q ss_pred CCCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
....+..++..+|...+ ..+++++|.||++||++|+.+.|.|.++++.+++ ++.|+.||+++++.++++|+|.++|
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~P 86 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDTNPETARNFQVVSIP 86 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhcCCCcCC
Confidence 34578999999999654 6789999999999999999999999999998876 6999999999999999999999999
Q ss_pred EEEEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 170 TIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 170 t~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
|++++++|+ ..++.|..+.+.|.++|.+.++
T Consensus 87 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 87 TLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 999999994 5689999999999999987664
No 67
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.75 E-value=6.1e-18 Score=146.97 Aligned_cols=99 Identities=19% Similarity=0.339 Sum_probs=89.3
Q ss_pred eChhhHHHHH--hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEe
Q 007882 98 LKERNFSDVI--ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (586)
Q Consensus 98 l~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 175 (586)
.+.++|++.+ ..++++||+|||+||+||+.+.|.|.++++++++ .+.++.||+++++.++++|+|.++||+++++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~---~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK---MAAIYLVDVDQTAVYTQYFDISYIPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT---TEEEEEEETTTCCHHHHHTTCCSSSEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCcCHHHHHHcCCCccCeEEEEE
Confidence 4678999888 4589999999999999999999999999998866 6999999999999999999999999999999
Q ss_pred CCee----------eeecC-CCCHHHHHHHHHHhc
Q 007882 176 DGQH----------KAYNG-GRTKDAIVTWIKKKI 199 (586)
Q Consensus 176 ~g~~----------~~~~g-~~~~~~l~~~i~~~~ 199 (586)
+|+. .++.| ..+.+.|.++|....
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 9954 47889 889999999998764
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.75 E-value=6.6e-18 Score=164.79 Aligned_cols=107 Identities=25% Similarity=0.527 Sum_probs=98.8
Q ss_pred CCCeEEeChhhHHHHHhC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 92 DKDVVVLKERNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
...|+.+|..+|++++.. +++++|+||++||+||+.+.|.|.++++++++ ++.|+.|||++++.++++|+|.++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG---QFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS---SSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC---CeEEEEEeCccCHHHHHHcCCCCCC
Confidence 457999999999998864 79999999999999999999999999999976 6999999999999999999999999
Q ss_pred EEEEEeCCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 170 TIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 170 t~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
|+++|++|+ ..++.|..+.+.+..|+...++.
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 999999994 46799999999999999998854
No 69
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.75 E-value=1.3e-17 Score=136.04 Aligned_cols=96 Identities=26% Similarity=0.647 Sum_probs=87.6
Q ss_pred ChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeC
Q 007882 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVD 176 (586)
Q Consensus 99 ~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~ 176 (586)
+.++|++.+. ++++++|.||++||++|+.+.|.|.++++.+++ +.++.||+++++.++++|+|.++||+++|++
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC
Confidence 5788999887 789999999999999999999999999998855 9999999999999999999999999999999
Q ss_pred C-eeeeecCCCCHHHHHHHHHHhc
Q 007882 177 G-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 177 g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
| ...++.|. +.+.|.+++.+.+
T Consensus 83 g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 9 45678888 9999999998764
No 70
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.75 E-value=8.3e-18 Score=157.06 Aligned_cols=112 Identities=21% Similarity=0.526 Sum_probs=100.5
Q ss_pred CCCCCCCeEEeChhhHHHH-HhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC
Q 007882 88 PEIDDKDVVVLKERNFSDV-IENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (586)
Q Consensus 88 ~~~~~~~v~~l~~~~~~~~-~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 166 (586)
+......+..+|+++|++. ++++++++|+|||+||++|+.+.|.|.++++.+++ .+.|+.||++.++.++++|+|.
T Consensus 7 ~~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 83 (222)
T 3dxb_A 7 HHPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIR 83 (222)
T ss_dssp --CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCTTTGGGGTCC
T ss_pred CCCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CcEEEEEECCCCHHHHHHcCCC
Confidence 3445567899999999984 67789999999999999999999999999999877 6999999999999999999999
Q ss_pred CCcEEEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 167 GFPTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 167 ~~Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++||+++|++| ...++.|..+.+.|.+||.+.+...
T Consensus 84 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 84 GIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp SBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred cCCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 99999999999 4568999999999999999998654
No 71
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.75 E-value=2.2e-17 Score=138.90 Aligned_cols=103 Identities=29% Similarity=0.615 Sum_probs=90.8
Q ss_pred CCCeEEe-ChhhHHHHHh----CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC
Q 007882 92 DKDVVVL-KERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (586)
Q Consensus 92 ~~~v~~l-~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 166 (586)
...+..+ +.++|++.+. ++++++|+||++||++|+.+.|.|.++++++. ++.|+.||+++++.++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSHHHHHHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHHcCCC
Confidence 3457777 6799998885 48999999999999999999999999998875 4999999999999999999999
Q ss_pred CCcEEEEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 167 GFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 167 ~~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++||++++++|+ ..++.| .+.+.|.++|.+.+
T Consensus 91 ~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 999999999995 456778 58899999998765
No 72
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.75 E-value=3e-18 Score=145.25 Aligned_cols=95 Identities=22% Similarity=0.408 Sum_probs=85.1
Q ss_pred hhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCC-e
Q 007882 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDG-Q 178 (586)
Q Consensus 100 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g-~ 178 (586)
++.++....++++++|+||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++||+++|++| .
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTM 108 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEE
Confidence 334444555789999999999999999999999999999976 799999999999999999999999999999999 5
Q ss_pred eeeecCCCCHHHHHHHHHH
Q 007882 179 HKAYNGGRTKDAIVTWIKK 197 (586)
Q Consensus 179 ~~~~~g~~~~~~l~~~i~~ 197 (586)
..++.|..+.+.|.++|++
T Consensus 109 ~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 109 LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEESSCCCHHHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHh
Confidence 5689999999999999865
No 73
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.75 E-value=2.1e-17 Score=139.29 Aligned_cols=103 Identities=25% Similarity=0.527 Sum_probs=91.1
Q ss_pred CCCeEEeChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-CcHHHHHHcCCCCC
Q 007882 92 DKDVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQGF 168 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~~ 168 (586)
...+..++.++|.+.+. ++++++|.||++||++|+.+.|.|.++++++++ +.++.||++ +++.++++|+|.++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcchHHHHHHcCCCee
Confidence 34689999999999886 689999999999999999999999999988754 899999998 68999999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 169 Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
||++++++|+ ..++.|.. .+.+.++|.+..
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999995 45777875 899999998764
No 74
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.75 E-value=3e-18 Score=138.87 Aligned_cols=94 Identities=26% Similarity=0.522 Sum_probs=82.2
Q ss_pred CcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCC
Q 007882 440 GNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGN 516 (586)
Q Consensus 440 ~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~ 516 (586)
.++|++.+.+ .+++++|.|||+||++|+.+.|.|+++++.+.+ +.|+.+|++.+. +.+|+|+++||+++|++|+
T Consensus 8 ~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~ 84 (105)
T 3zzx_A 8 QEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD---VVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQ 84 (105)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---EEEEEEETTTCHHHHHHTTCCBSSEEEEEETTE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC---eEEEEEecccCHHHHHHcCCCeecEEEEEECCE
Confidence 4689988855 367999999999999999999999999998754 889999998765 4799999999999999999
Q ss_pred cccCccccccccCHHHHHHHHHhc
Q 007882 517 KSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 517 ~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
.+. ++.| .+.++|.+||++|
T Consensus 85 ~v~---~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 85 KLD---SLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEE---EEES-CCHHHHHHHHHHH
T ss_pred EEE---EEeC-cCHHHHHHHHHhc
Confidence 875 6777 6899999999876
No 75
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.75 E-value=1.4e-17 Score=138.70 Aligned_cols=100 Identities=29% Similarity=0.628 Sum_probs=89.8
Q ss_pred CeEEeCh-hhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 94 DVVVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 94 ~v~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
++..++. ++|+..+. ++++++|.||++||++|+.+.|.|.++++.+ ++.++.||+++++.++++|+|.++||
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccHHHHHHcCCCccce
Confidence 4788888 99999987 7899999999999999999999999998876 48999999999999999999999999
Q ss_pred EEEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 171 IYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 171 ~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++++++|+ ..++.| .+.+.|.++|.+.+
T Consensus 89 ~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 89 FIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99999994 457778 68899999998753
No 76
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.74 E-value=2.4e-17 Score=138.42 Aligned_cols=103 Identities=27% Similarity=0.558 Sum_probs=92.6
Q ss_pred CCeEEeChhhHHHHHh----CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCC
Q 007882 93 KDVVVLKERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGF 168 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~ 168 (586)
..+..++.++|+..+. .+++++|.||++||++|+.+.|.|.++++.+.+ +.|+.||+++++.++++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCHHHHHHcCCCcc
Confidence 3467789999998885 489999999999999999999999999988754 99999999999999999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHHHhcC
Q 007882 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 169 Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
||++++++|+ ..++.|.. .+.|.++|.+.+.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999994 46788988 9999999998764
No 77
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.74 E-value=4e-18 Score=143.07 Aligned_cols=108 Identities=37% Similarity=0.797 Sum_probs=94.0
Q ss_pred CCCCeEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcC--CCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA--NESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
....+..+++++|++.+ .++++++|+|||+||++|+.+.|.|.++++.+++. ...+.|+.|||++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45678999999999886 67899999999999999999999999999998752 126999999998876 655 9999
Q ss_pred CcEEEEEeCC-e--eeeecCCCCHHHHHHHHHHhcCC
Q 007882 168 FPTIYFFVDG-Q--HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 168 ~Pt~~~~~~g-~--~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
+||+++|++| . ..+|.|..+.+.|.+||.+.+..
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 9999999876 5 67899999999999999998754
No 78
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.74 E-value=2.9e-17 Score=133.66 Aligned_cols=99 Identities=31% Similarity=0.660 Sum_probs=88.1
Q ss_pred EEeCh-hhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 96 VVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 96 ~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..++. ++|++.+. .+++++|.||++||++|+.+.|.|.++++.+. ++.++.||+++++.++++|+|.++||++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNEEAAAKYSVTAMPTFV 77 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCHHHHHHcCCccccEEE
Confidence 45666 89999997 68999999999999999999999999998874 4999999999999999999999999999
Q ss_pred EEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 173 FFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 173 ~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++++|. ..++.| .+.+.|.++|.+.+
T Consensus 78 ~~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 78 FIKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 999994 457778 68999999998753
No 79
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.74 E-value=2.7e-17 Score=155.31 Aligned_cols=193 Identities=12% Similarity=0.082 Sum_probs=142.4
Q ss_pred ccEEEEEEec---cchhhHHHHHHHHHHh---ccCc--eEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcc
Q 007882 324 KNQLLLFAVS---NDSEKLLPVFEEAAKS---FKGK--LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKH 395 (586)
Q Consensus 324 ~~~l~~~~~~---~~~~~~~~~l~~lA~~---~~~~--~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y 395 (586)
+..+.+|... ..|+...+.+.++|+. ++++ +.|+.+|++. ...++..||+. ..|+++++ .+ ..
T Consensus 27 pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~---~~~~~~~~gv~--~~Pt~~i~-~g---~~ 97 (243)
T 2hls_A 27 PVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES---DSDKFSEFKVE--RVPTVAFL-GG---EV 97 (243)
T ss_dssp CEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT---THHHHHHTTCC--SSSEEEET-TT---TE
T ss_pred CEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc---CHHHHHhcCCC--cCCEEEEE-CC---ce
Confidence 4445556554 5588899999999988 4555 9999999876 44788999997 47998887 33 33
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHH
Q 007882 396 ILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNK 475 (586)
Q Consensus 396 ~~~~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~ 475 (586)
.+.+..+.+.+..|+..++++...+. .++.++++......++.+++.|||+||++|+.+.|.|++
T Consensus 98 ~~~G~~~~~~l~~fv~~~l~~~~~~~---------------~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~ 162 (243)
T 2hls_A 98 RWTGIPAGEEIRALVEVIMRLSEDES---------------GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHM 162 (243)
T ss_dssp EEESCCCTTHHHHHHHHHHHHHTTCC---------------CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHH
T ss_pred eEcCCCcHHHHHHHHHHHHhccCCCC---------------CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHH
Confidence 34444566789999988875333221 122234443322235667899999999999999999999
Q ss_pred HHHHhc--CCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCccc
Q 007882 476 LAKHLR--GVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 547 (586)
Q Consensus 476 ~~~~~~--~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 547 (586)
++..+. +..++.++.+|++.+. +..++|+++||+++ +|+. .|.|.++.++|.++|.+.+......
T Consensus 163 la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-----~~~G~~~~~~l~~~l~~~~~~~~~~ 231 (243)
T 2hls_A 163 FAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-----VFVGVPYEEDFLDYVKSAAEGRLTV 231 (243)
T ss_dssp HHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-----EEESCCCHHHHHHHHHHHHTTCCCC
T ss_pred HHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-----EEeCCCCHHHHHHHHHHHhhccccc
Confidence 999883 2246999999988765 46899999999988 6653 4889999999999999988654333
No 80
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.74 E-value=6.4e-18 Score=139.01 Aligned_cols=101 Identities=20% Similarity=0.291 Sum_probs=88.6
Q ss_pred EEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEe
Q 007882 96 VVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (586)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~ 175 (586)
..++.++| +.+.++++++|+||++||++|+.+.|.|.++++.+. ++.++.||+++++.++++|+|.++||+++|+
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 45678889 677778999999999999999999999999988764 4899999999999999999999999999999
Q ss_pred CC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 176 DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 176 ~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
+| ...++.|..+.+.|.+++....++
T Consensus 81 ~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 99 556889999999999999887654
No 81
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.74 E-value=2.4e-17 Score=144.35 Aligned_cols=105 Identities=23% Similarity=0.514 Sum_probs=92.9
Q ss_pred CCeEEeC-hhhHHHHHhC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 93 KDVVVLK-ERNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 93 ~~v~~l~-~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
..+..++ .++|+.++.. +++++|+||++||++|+.+.|.|.++++.+. ++.|+.||+++++.++++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 4577776 6999999977 8999999999999999999999999998873 4999999999999999999999999
Q ss_pred EEEEEeCCee-eeecCCCCHHHHHHHHHHhcCCC
Q 007882 170 TIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 170 t~~~~~~g~~-~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
|+++|++|+. .++.| .+.+.|.++|.+.+...
T Consensus 88 t~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 88 TFLFFKNSQKIDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHSCTT
T ss_pred EEEEEECCEEEEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999999955 45667 57888999999998653
No 82
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.74 E-value=1.8e-17 Score=137.07 Aligned_cols=94 Identities=29% Similarity=0.551 Sum_probs=85.2
Q ss_pred ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCe
Q 007882 99 KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQ 178 (586)
Q Consensus 99 ~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~ 178 (586)
+.++|+++++++++++|+||++||++|+.+.|.|.++++++.+ +.|+.||+++++.++++|+|.++||++++++|+
T Consensus 19 ~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 94 (114)
T 2oe3_A 19 NLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQ 94 (114)
T ss_dssp SHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTE
T ss_pred CHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCe
Confidence 3577888898999999999999999999999999999988755 999999999999999999999999999999994
Q ss_pred -eeeecCCCCHHHHHHHHHH
Q 007882 179 -HKAYNGGRTKDAIVTWIKK 197 (586)
Q Consensus 179 -~~~~~g~~~~~~l~~~i~~ 197 (586)
..++.|.. .+.|.++|.+
T Consensus 95 ~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEEeCCC-HHHHHHHHHh
Confidence 46788988 8999998865
No 83
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.74 E-value=3.4e-18 Score=143.53 Aligned_cols=104 Identities=23% Similarity=0.587 Sum_probs=88.8
Q ss_pred CCeEEeChhhHHHH-HhCCCeEEEEEECCCCh--------------hhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH
Q 007882 93 KDVVVLKERNFSDV-IENNKFVMVEFYAPWCG--------------HCQALAPEYAAAATELKSANESVVLAKVDATEEN 157 (586)
Q Consensus 93 ~~v~~l~~~~~~~~-~~~~~~~lv~f~a~wC~--------------~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~ 157 (586)
..+..+++++|+.. ++++++++|+|||+||+ +|+.+.|.|.++++.+++ ++.++.||+++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~---~~~~~~vd~d~~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC---CeEEEEEECCCCH
Confidence 35889999999865 46789999999999999 999999999999998876 6999999999999
Q ss_pred HHHHHcCCCCCcEEEEEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 158 ELAHEYDVQGFPTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 158 ~l~~~~~i~~~Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.++++|+|.++||+++|++| ...++.|..+.+.+.++|.+.+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999999999 4568999999999999998765
No 84
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.74 E-value=4.2e-16 Score=156.90 Aligned_cols=311 Identities=14% Similarity=0.145 Sum_probs=229.0
Q ss_pred cccccchhHHHHhcccCCeEEEEEecCCCCcc--hH-------HHHHhc-cccC-ceeEEec---CChhHHHhcCCCCCC
Q 007882 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGSE--SE-------VLADAS-RLED-DVNFYQT---TNPDVAKIFHLDSKV 268 (586)
Q Consensus 203 ~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~--~~-------~f~~~~-~~~~-~~~F~~~---~~~~~~~~~~~~~~~ 268 (586)
+..++ .+.+++++.++..++|-|+..++..- .. .+..++ .+.. .+.|+.+ ..+.+++++++..
T Consensus 15 v~~lt-~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~-- 91 (367)
T 3us3_A 15 VINVN-AKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE-- 91 (367)
T ss_dssp CEECC-TTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS--
T ss_pred cEECC-HHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc--
Confidence 44443 46788888888889999998888551 11 455555 3333 5888875 4678999999996
Q ss_pred CCCeeEEeccCCcceecccCCCChhHHHHHHHhcCCCceeecCC-CcccccccCCcccEEEEEEeccchhhHHHHHHHHH
Q 007882 269 NRPALVMVKKETEKISYFDGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAA 347 (586)
Q Consensus 269 ~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lA 347 (586)
.|++++|+.. ....|.|..+.+.|.+||.....|.+..++. +++..+........++.|... .+......|.++|
T Consensus 92 -~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~-~~~~~~~~f~~~A 167 (367)
T 3us3_A 92 -EDSIYVFKED--EVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKN-KDSEHYKAFKEAA 167 (367)
T ss_dssp -TTEEEEEETT--EEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSC-TTCHHHHHHHHHH
T ss_pred -CceEEEEECC--cEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECC-CCchHHHHHHHHH
Confidence 8999999953 4568999999999999999999999999864 666666552224444544443 2345567899999
Q ss_pred HhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCCC-CCCHHHHHHHHHHHhcCCCCCCCCCCC
Q 007882 348 KSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDG-ELTLDKIKTFGEDFLEGKLKPFFKSDP 426 (586)
Q Consensus 348 ~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~~-~~t~e~i~~fi~~~~~gkl~~~~ks~~ 426 (586)
..+++.+.|+.+.. ..++..+|+. .|.++++.........|.+ ..+.+.|.+|+....
T Consensus 168 ~~~~~~~~F~~~~~------~~~~~~~~v~---~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~------------ 226 (367)
T 3us3_A 168 EEFHPYIPFFATFD------SKVAKKLTLK---LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHR------------ 226 (367)
T ss_dssp HHHTTTSCEEEECC------HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTC------------
T ss_pred HhhcCCcEEEEECC------HHHHHHcCCC---CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcC------------
Confidence 99999999998763 2567889996 3777777664445556677 489999999998742
Q ss_pred CCCCCCCCeEEEeCcchhHHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc------c
Q 007882 427 IPETNDGDVKIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------H 499 (586)
Q Consensus 427 ~~~~~~~~v~~l~~~~f~~~v~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~------~ 499 (586)
...+..++..++....... .++.++.|+.++|..|..+.+.++++|+.+++..++.|+.+|+..... .
T Consensus 227 -----~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~ 301 (367)
T 3us3_A 227 -----RSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEK 301 (367)
T ss_dssp -----SCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHH
T ss_pred -----ccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHH
Confidence 1357889999987765432 446778899999999999999999999999875469999999887552 2
Q ss_pred cCCCC-cCcEEEEEeCCCcccCccccc---cccCHHHHHHHHHhcCCCCcc
Q 007882 500 RAKSD-GFPTILFFPAGNKSFDPINVD---VDRTVVALYKFLKKNASIPFK 546 (586)
Q Consensus 500 ~~~i~-~~Pt~~~~~~g~~~~~~~~~~---g~~~~~~l~~~i~~~~~~~~~ 546 (586)
.+++. .+|+++++...........+. +..+.++|.+|+.+...-+.+
T Consensus 302 ~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 302 TFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp HHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSC
T ss_pred hcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcC
Confidence 36776 899999997543310112344 368999999999987755443
No 85
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.74 E-value=7.2e-18 Score=144.24 Aligned_cols=104 Identities=18% Similarity=0.321 Sum_probs=92.4
Q ss_pred CCCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC---------CCcHHHHHH
Q 007882 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA---------TEENELAHE 162 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~---------~~~~~l~~~ 162 (586)
...+..++.++|++.+.+ +++|+|||+||++|+.+.|.|.+++++++ +.|+.||+ ++++.++++
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 456899999999999976 99999999999999999999999988762 88999999 778899999
Q ss_pred cCCCCCcEEEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 163 YDVQGFPTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 163 ~~i~~~Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
|+|.++||++++++| ...++.|..+.+.+..++++.+.+.
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred cCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999 5568999999999999999998664
No 86
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.74 E-value=2.5e-17 Score=141.97 Aligned_cols=106 Identities=25% Similarity=0.534 Sum_probs=82.3
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
+.+..+++++|...+..++.++|+||++||++|+.+.|.|.++++.+.+ ++.|+.||++.+..++++|+|.++||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 4578899999998886655599999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 173 FFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 173 ~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
+|++|. ...+.|..+.+.|.+||.+.+..
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 999994 56789999999999999988753
No 87
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.74 E-value=2.2e-17 Score=156.75 Aligned_cols=111 Identities=45% Similarity=0.862 Sum_probs=103.4
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
..+..++.++|+..+..+++++|+||++||++|+.+.|.|.++++.+.+.+..+.|+.||++++++++++|+|.++||++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 209 (241)
T 3idv_A 130 EVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLK 209 (241)
T ss_dssp CSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 45889999999999999999999999999999999999999999999875556999999999999999999999999999
Q ss_pred EEeCCeeeeecCCCCHHHHHHHHHHhcCCCc
Q 007882 173 FFVDGQHKAYNGGRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 173 ~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~ 203 (586)
+|++|+...|.|.++.+.|.+||.+.+++.+
T Consensus 210 ~~~~g~~~~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 210 IFRKGRPYDYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEETTEEEECCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEECCeEEEecCCCCHHHHHHHHHhhhCCCC
Confidence 9999987789999999999999999987653
No 88
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=3.1e-18 Score=146.37 Aligned_cols=111 Identities=34% Similarity=0.706 Sum_probs=96.5
Q ss_pred CCCeEEeChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 92 DKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
...|..+++++|+..+. .+++++|+||++||++|+.+.|.|.++++.++.. .++.|+.||++.+..++++|+|.++||
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 45689999999998875 4899999999999999999999999999998742 269999999999999999999999999
Q ss_pred EEEEeCC---eeeeec-CCCCHHHHHHHHHHhcCCCc
Q 007882 171 IYFFVDG---QHKAYN-GGRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 171 ~~~~~~g---~~~~~~-g~~~~~~l~~~i~~~~~~~~ 203 (586)
+++|++| ....|. |..+.+.|.+||.+.+....
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999876 234678 55899999999999987553
No 89
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.73 E-value=5.6e-18 Score=141.41 Aligned_cols=101 Identities=13% Similarity=0.245 Sum_probs=85.2
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC----CCcHHHHHHcCCCCC
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----TEENELAHEYDVQGF 168 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----~~~~~l~~~~~i~~~ 168 (586)
..+..++.++|+..+.++++++|+|||+||++|+.+.|.|.++++.+.. .+.++.++. +....++++|+|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTCGGGHHHHHHHHHHHTCCSS
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCCcCcHHHHHHHHHHcCCCCC
Confidence 3578889999999999999999999999999999999999999988753 465553332 223578999999999
Q ss_pred cEEEEEeCC-eeeeecCCCCHHHHHHHHH
Q 007882 169 PTIYFFVDG-QHKAYNGGRTKDAIVTWIK 196 (586)
Q Consensus 169 Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~ 196 (586)
||+++|++| ...++.|..+.+.|.+||.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 PGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999999999 4568899999999999985
No 90
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.73 E-value=1e-17 Score=141.64 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=85.5
Q ss_pred HHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEe--CCCcHHHHHHcCCCCCcEEEEEe-CC-eee
Q 007882 105 DVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD--ATEENELAHEYDVQGFPTIYFFV-DG-QHK 180 (586)
Q Consensus 105 ~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd--~~~~~~l~~~~~i~~~Pt~~~~~-~g-~~~ 180 (586)
....++++++|+||++||++|+.+.|.|.++++.+++ ++.++.|| ++.+..++++|+|.++||+++|+ +| ...
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG---KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS---SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 3445688999999999999999999999999998864 69999999 99999999999999999999998 88 456
Q ss_pred eecCCCCHHHHHHHHHHhcCCC
Q 007882 181 AYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 181 ~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++.|..+.+.|.++|.+.+.+.
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCC
T ss_pred EecCCCCHHHHHHHHHHHhccc
Confidence 7899999999999999998664
No 91
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.73 E-value=2.4e-17 Score=144.67 Aligned_cols=124 Identities=17% Similarity=0.235 Sum_probs=99.8
Q ss_pred CCeEEEeCcchhHHhhc-cCCcEEEEEeC-------CCChhhhhhhHHHHHHHHHhcCC---CcEEEEEEeCCccc--cc
Q 007882 433 GDVKIVVGNNFDEIVLD-ESKDVLLEIYA-------PWCGHCQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNE--HH 499 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~-~~~~~~v~f~~-------~~C~~C~~~~~~~~~~~~~~~~~---~~i~~~~id~~~~~--~~ 499 (586)
+.+..++.++|++.+.. .+.++||+||| +||++|+.+.|.|+++++.+... .++.|+++|++.+. +.
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 46889999999998753 35689999999 49999999999999999998611 36999999998876 47
Q ss_pred cCCCCcCcEEEEEeCCCccc---------Ccccc---cc-ccCHHHHHHHHHhcCCCCccccCCCCCCCC
Q 007882 500 RAKSDGFPTILFFPAGNKSF---------DPINV---DV-DRTVVALYKFLKKNASIPFKIQKPTSAPKT 556 (586)
Q Consensus 500 ~~~i~~~Pt~~~~~~g~~~~---------~~~~~---~g-~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 556 (586)
+|+|+++||+++|++|.... .+..| .| .++.+.|.+||.+++++.+.+..|.-..|+
T Consensus 98 ~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~~ 167 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQEE 167 (178)
T ss_dssp HTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC----
T ss_pred HcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHHh
Confidence 99999999999999987542 12344 24 799999999999999988887777755543
No 92
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=144.30 Aligned_cols=134 Identities=36% Similarity=0.611 Sum_probs=108.2
Q ss_pred HHHHhcCCCceeecCCCcccccccCCcccEEEEEEec--cchhhHHHHHHHHHHhccCceEEEEEECCCccccccccccc
Q 007882 297 DFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYF 374 (586)
Q Consensus 297 ~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~ 374 (586)
+.+..+++|+|.++|.++...++..+.+.++++|... .+.+.+...++++|++|++++.|+++|.+...+ ..++..|
T Consensus 6 ~~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~-~~~l~~f 84 (147)
T 3bj5_A 6 HHMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDN-QRILEFF 84 (147)
T ss_dssp ---------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGG-HHHHHHT
T ss_pred cchhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhH-HHHHHHc
Confidence 3467899999999999999999999888887777753 446788999999999999999999999854443 3467899
Q ss_pred CccCCCCceEEEecC-CCCCcccCC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 007882 375 GITGEAPKVLAYTGN-DDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 431 (586)
Q Consensus 375 gi~~~~~p~~~i~~~-~~~~~y~~~-~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~ 431 (586)
|++..+.|+++|++. ..+.+|.+. ++++.+.|.+|+++|++|+|+|++||+++|+.|
T Consensus 85 Gl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~w 143 (147)
T 3bj5_A 85 GLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDW 143 (147)
T ss_dssp TCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGG
T ss_pred CCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCc
Confidence 999878999999876 556778875 789999999999999999999999999999873
No 93
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.73 E-value=3.6e-17 Score=137.02 Aligned_cols=104 Identities=27% Similarity=0.578 Sum_probs=92.5
Q ss_pred CCeEEeCh-hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLKE-RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~~-~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..++. ++|++++..+++++|.||++||++|+.+.|.|.++++.+.+ .++.++.||++.++.++++|+|.++||+
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~--~~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG--DKVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH--HHSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC--CcEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 34566665 89999998899999999999999999999999999988876 1399999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 172 ~~~~~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|++|+ ..++.|. +.+.|.++|.+.+
T Consensus 93 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999994 5678888 9999999998865
No 94
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.72 E-value=4.3e-18 Score=145.89 Aligned_cols=111 Identities=14% Similarity=0.159 Sum_probs=81.8
Q ss_pred CeEEeChhhHHHHHhCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCceE--EEEEeCCCcHHHHHHcCCCCCc
Q 007882 94 DVVVLKERNFSDVIENNKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANESVV--LAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~lv~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~v~--~~~vd~~~~~~l~~~~~i~~~P 169 (586)
.+..+++++|++.+..++.++|.||++| |++|+.+.|.|.++++++ + ++. |+.||++++++++++|+|+++|
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~---~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P---QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T---TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c---ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 5788999999999988778899999988 999999999999999988 5 577 9999999999999999999999
Q ss_pred EEEEEeCC-eeeeecCCCCHHHHHHHHHHhcCCCcccccc
Q 007882 170 TIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGIYNITT 208 (586)
Q Consensus 170 t~~~~~~g-~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 208 (586)
|+++|++| ...++.|..+.+.|.++|.+.+..+.....+
T Consensus 94 T~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~~ 133 (142)
T 2es7_A 94 ATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQETV 133 (142)
T ss_dssp EEEEESCC----CEESCCCHHHHHHHHHHHHC--------
T ss_pred eEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCCc
Confidence 99999999 4568999999999999999999776655443
No 95
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.72 E-value=6.8e-17 Score=139.09 Aligned_cols=105 Identities=22% Similarity=0.511 Sum_probs=91.8
Q ss_pred CCCeEEeC-hhhHHHHHh----CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC
Q 007882 92 DKDVVVLK-ERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (586)
Q Consensus 92 ~~~v~~l~-~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 166 (586)
...++.++ .++|++.+. ++++++|+||++||++|+.+.|.|.++++.+. ++.|+.||+++++.++++|+|.
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~~~~~~~~v~ 98 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELSDFSASWEIK 98 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccHHHHHHcCCC
Confidence 44566665 799998873 58999999999999999999999999998874 4999999999999999999999
Q ss_pred CCcEEEEEeCCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 167 GFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 167 ~~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
++||++++++|+ ..++.|. +.+.|.++|.+.+..
T Consensus 99 ~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 99 ATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999999999994 4577887 889999999988754
No 96
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.72 E-value=3e-17 Score=135.40 Aligned_cols=98 Identities=12% Similarity=0.269 Sum_probs=82.4
Q ss_pred CeEEeChhhHHHHHhC-CC--eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 94 DVVVLKERNFSDVIEN-NK--FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~-~~--~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
.+.+++.++|.+.+.+ ++ +++|.|||+||+||+.+.|.|+++++++.+ +.|+.||+++. +.+|+|+++||
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~----v~f~kvd~d~~---~~~~~v~~~PT 76 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE----TKFVKAIVNSC---IQHYHDNCLPT 76 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT----SEEEEEEGGGT---STTCCGGGCSE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC----CEEEEEEhHHh---HHHCCCCCCCE
Confidence 5788999999987754 33 999999999999999999999999998854 99999999875 58999999999
Q ss_pred EEEEeCC-eeeeecCCC-------CHHHHHHHHHHh
Q 007882 171 IYFFVDG-QHKAYNGGR-------TKDAIVTWIKKK 198 (586)
Q Consensus 171 ~~~~~~g-~~~~~~g~~-------~~~~l~~~i~~~ 198 (586)
+++|++| ...++.|.. +.+.|..+|.+.
T Consensus 77 ~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9999999 456777754 567777777653
No 97
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.72 E-value=1e-17 Score=139.54 Aligned_cols=104 Identities=11% Similarity=0.071 Sum_probs=92.8
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCC--hhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWC--GHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C--~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.....++.++|++.+...++++||+|||+|| ++|+.+.|+++++++.+.+ ++.++++|.+.+. ..+|+|+++||
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCE
Confidence 4566899999999997666699999999999 9999999999999999876 6999999988876 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. +..|..+.+.|.++|++++
T Consensus 93 lilFkdG~~v~---~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 93 LAVVQPERTLG---VIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEECCEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 99999999986 8889999999999999877
No 98
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=4.5e-17 Score=139.11 Aligned_cols=113 Identities=49% Similarity=0.935 Sum_probs=98.1
Q ss_pred CCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc--ccCCCCcCcE
Q 007882 431 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 508 (586)
Q Consensus 431 ~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~--~~~~i~~~Pt 508 (586)
..+.+..+++++|+..+...+++++|+||++||++|+.+.|.|.++++.+.+...+.++.+|++.+.. ..|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 35679999999999988667899999999999999999999999999999864579999999987653 6799999999
Q ss_pred EEEEeCCCcccCccccc-cccCHHHHHHHHHhcCCCC
Q 007882 509 ILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~-g~~~~~~l~~~i~~~~~~~ 544 (586)
+++|.+|+.+ ..+.|. |.++.+.|.+||.+++...
T Consensus 85 ~~~~~~g~~~-~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 85 IYFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEECTTCTT-SCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEeCCCcc-cceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999988776 455677 5689999999999998654
No 99
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.72 E-value=2.8e-17 Score=141.52 Aligned_cols=98 Identities=21% Similarity=0.324 Sum_probs=83.4
Q ss_pred ChhhHHHHHh--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeC
Q 007882 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVD 176 (586)
Q Consensus 99 ~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~ 176 (586)
+.++|++.+. .+++++|+|||+||++|+.+.|.|.++++++.+ ++.|+.||++++++++++|+|.++||+++|++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTSSCSCSSCEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccCHHHHHHcCCCCCCEEEEEEC
Confidence 4788987664 589999999999999999999999999999866 69999999999999999999999999999999
Q ss_pred Ceee----------eecCCCC-HHHHHHHHHHhc
Q 007882 177 GQHK----------AYNGGRT-KDAIVTWIKKKI 199 (586)
Q Consensus 177 g~~~----------~~~g~~~-~~~l~~~i~~~~ 199 (586)
|+.. +..|..+ .+.+.++|.+.+
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 9544 2445554 777887777655
No 100
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=3e-18 Score=147.19 Aligned_cols=103 Identities=24% Similarity=0.492 Sum_probs=90.0
Q ss_pred CCeEEeChhhHHHHHhCCC--eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC----
Q 007882 93 KDVVVLKERNFSDVIENNK--FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ---- 166 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~--~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~---- 166 (586)
..+..++.++|++.+..++ +++|+|||+||++|+.+.|.|.++++++++ .++.|+.||+++++.++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC--TGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS--SSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCccCHHHHHHccCcccCC
Confidence 4588999999999886554 899999999999999999999999999864 36999999999999999999999
Q ss_pred --CCcEEEEEeCC-eeeeecCCCCHHHHHHHHHH
Q 007882 167 --GFPTIYFFVDG-QHKAYNGGRTKDAIVTWIKK 197 (586)
Q Consensus 167 --~~Pt~~~~~~g-~~~~~~g~~~~~~l~~~i~~ 197 (586)
++||+++|++| ...++.|..+.+.|.+|+.+
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred cCCCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 99999999999 45678898887777666543
No 101
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.71 E-value=1.1e-16 Score=133.43 Aligned_cols=104 Identities=33% Similarity=0.656 Sum_probs=91.1
Q ss_pred CCeEEe-ChhhHHHHHhC----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 93 KDVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
..++.+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.++.||++.++.++++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELKDVAEAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCHHHHHHcCCCc
Confidence 356777 57999988864 8999999999999999999999999998875 49999999999999999999999
Q ss_pred CcEEEEEeCCee-eeecCCCCHHHHHHHHHHhcCC
Q 007882 168 FPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 168 ~Pt~~~~~~g~~-~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
+||++++++|+. .++.| .+.+.|.++|.+.+..
T Consensus 82 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 82 MPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp BSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999954 56777 5889999999988754
No 102
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.71 E-value=3e-17 Score=135.39 Aligned_cols=104 Identities=16% Similarity=0.229 Sum_probs=89.0
Q ss_pred CCeEEEeCcchhHHhhccCC--cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccccccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESK--DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~--~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|.+.+.+.++ +++|.|||+||++|+.+.|.|+++++.+.+ +.|+++|++.. ..+|+|+++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~---v~f~kvd~d~~-~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE---TKFVKAIVNSC-IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT---SEEEEEEGGGT-STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC---CEEEEEEhHHh-HHHCCCCCCCEEE
Confidence 45778899999998866554 899999999999999999999999999753 88999999876 5889999999999
Q ss_pred EEeCCCcccCcccccc-------ccCHHHHHHHHHhcCCC
Q 007882 511 FFPAGNKSFDPINVDV-------DRTVVALYKFLKKNASI 543 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g-------~~~~~~l~~~i~~~~~~ 543 (586)
+|++|+.+. ++.| ..+.+.|..+|.++.-+
T Consensus 79 ~fk~G~~v~---~~~G~~~~gg~~~~~~~le~~L~~~g~i 115 (118)
T 3evi_A 79 VYKNGQIEA---KFIGIIECGGINLKLEELEWKLAEVGAI 115 (118)
T ss_dssp EEETTEEEE---EEESTTTTTCSSCCHHHHHHHHHTTTSC
T ss_pred EEECCEEEE---EEeChhhhCCCCCCHHHHHHHHHHcCCc
Confidence 999999886 4444 34889999999887654
No 103
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.71 E-value=9.2e-17 Score=132.84 Aligned_cols=102 Identities=30% Similarity=0.595 Sum_probs=89.9
Q ss_pred CCeEEe-ChhhHHHHHhC----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 93 KDVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
..+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.|+.||+++++.++++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKAVAEEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCHHHHHHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccHHHHHhCCCCc
Confidence 456777 67999988864 8999999999999999999999999998875 49999999999999999999999
Q ss_pred CcEEEEEeCCee-eeecCCCCHHHHHHHHHHhc
Q 007882 168 FPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 168 ~Pt~~~~~~g~~-~~~~g~~~~~~l~~~i~~~~ 199 (586)
+||++++++|+. .++.| .+.+.|.++|.+.+
T Consensus 80 ~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 80 MPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred ccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999999954 56777 68889999998765
No 104
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.71 E-value=3.4e-17 Score=138.17 Aligned_cols=105 Identities=10% Similarity=0.139 Sum_probs=86.2
Q ss_pred eEEEeC-cchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 435 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 435 v~~l~~-~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+..+.. .+|++.+.+ .++++||.|||+||++|+.+.|.|+++++++.+ .+.|+.+|++.+. +..|+|+++||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 455554 689988864 778999999999999999999999999999876 5888888888765 4789999999999
Q ss_pred EEeCCCccc------CccccccccC-HHHHHHHHHhcC
Q 007882 511 FFPAGNKSF------DPINVDVDRT-VVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~------~~~~~~g~~~-~~~l~~~i~~~~ 541 (586)
+|++|+.+. ...+..|..+ .++|.++|+.+.
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999998851 0114678766 889999988765
No 105
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.70 E-value=1.8e-16 Score=132.04 Aligned_cols=104 Identities=25% Similarity=0.463 Sum_probs=87.0
Q ss_pred CeEEe--ChhhHHH-HHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 94 DVVVL--KERNFSD-VIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 94 ~v~~l--~~~~~~~-~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
.+..+ +..+|++ +.+.+++++|+||++||++|+.+.|.|.++++.+ . ++.|+.||+++++.++++|+|.++||
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~---~v~~~~vd~~~~~~~~~~~~i~~~Pt 79 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K---DVTFIKVDVDKNGNAADAYGVSSIPA 79 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T---TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C---CeEEEEEECCCCHHHHHhcCCCCCCE
Confidence 35667 6788985 4567899999999999999999999999999988 3 69999999999999999999999999
Q ss_pred EEEEeC----Ce-eeeecCCCCHHHHHHHHHHhcCCC
Q 007882 171 IYFFVD----GQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 171 ~~~~~~----g~-~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
+++|++ |+ ..++.|..+ +.|.+.+.+...++
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred EEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 999987 74 456777654 56999998877543
No 106
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.69 E-value=1.2e-16 Score=130.94 Aligned_cols=104 Identities=25% Similarity=0.508 Sum_probs=92.3
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|++.+...+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++||++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 46788999999988877889999999999999999999999999999875 5999999988765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.+||++.+
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAA---TKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEE---EEecCCCHHHHHHHHHHhh
Confidence 999888764 7889999999999998764
No 107
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.68 E-value=3.9e-16 Score=145.72 Aligned_cols=107 Identities=21% Similarity=0.397 Sum_probs=94.9
Q ss_pred CCCCCeEEeChhhHHHHHhCCCeEEEEEE--CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----cHHHHHH
Q 007882 90 IDDKDVVVLKERNFSDVIENNKFVMVEFY--APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----ENELAHE 162 (586)
Q Consensus 90 ~~~~~v~~l~~~~~~~~~~~~~~~lv~f~--a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----~~~l~~~ 162 (586)
.....++.|++.+|++++..++++||.|| ||||+ +.|.|.++++.+.+...++.|+.|||++ ++++|++
T Consensus 13 ~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 13 VTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp --CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 34456899999999999988899999999 99998 9999999999986422369999999999 8999999
Q ss_pred cCCC--CCcEEEEEeCCe---eeee--cCCCCHHHHHHHHHHhcCC
Q 007882 163 YDVQ--GFPTIYFFVDGQ---HKAY--NGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 163 ~~i~--~~Pt~~~~~~g~---~~~~--~g~~~~~~l~~~i~~~~~~ 201 (586)
|+|+ ++||+++|+ |. ...| .|.++.+.|.+||.+.++.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~ 133 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPL 133 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSC
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhcc
Confidence 9999 999999999 85 5788 8999999999999998763
No 108
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.68 E-value=2.2e-16 Score=134.52 Aligned_cols=104 Identities=18% Similarity=0.387 Sum_probs=89.7
Q ss_pred CCCCeEEeCh-hhHHHHHhC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 91 DDKDVVVLKE-RNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 91 ~~~~v~~l~~-~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
....++.++. ++|+.++.. ++++||+|||+||++|+.+.|.|.++++.+ ++.|+.||++++..++++|+|.+
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~l~~~~~v~~ 92 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHPKLNDQHNIKA 92 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCHHHHHHTTCCS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchHHHHHhcCCCC
Confidence 3445788885 889988864 579999999999999999999999887765 48999999999999999999999
Q ss_pred CcEEEEEe--CCe--e-eeecCCCCHHHHHHHHHHhcC
Q 007882 168 FPTIYFFV--DGQ--H-KAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 168 ~Pt~~~~~--~g~--~-~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+||+++|+ +|. . .++.|. +.+.|.++|.+.+.
T Consensus 93 ~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 93 LPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp SSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99999996 885 3 467787 89999999998764
No 109
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.68 E-value=8.9e-17 Score=132.46 Aligned_cols=104 Identities=20% Similarity=0.307 Sum_probs=93.1
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
..+..++.++|.+.+...+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..++|.++||++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 45888999999999877789999999999999999999999999999875 5888888888766 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.+||++++
T Consensus 82 ~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEYKG---KMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEEEE---EEESSCCHHHHHHHHHHHH
T ss_pred EEECCEEEE---EEeccCCHHHHHHHHHHHh
Confidence 999998764 7889999999999998864
No 110
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.68 E-value=1.8e-17 Score=138.52 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=92.1
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCCc-EEEEEEeCCccc--cccCCCCcCcE
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDS-IVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~--C~~C~~~~~~~~~~~~~~~~~~~-i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.+..++.++|++.+ ..+.++||+||++| |++|+.+.|.++++++.+.+ + +.|+++|.+.+. +.+|+|+++||
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 46788999999998 46789999999999 99999999999999999876 5 888888887765 47999999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+++|++|+.+. +..|..+.+.|.++|++++.
T Consensus 95 lilFk~G~~v~---~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 95 TLVFTGGNYRG---VLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHHC
T ss_pred EEEEECCEEEE---EEecCCCHHHHHHHHHHHhc
Confidence 99999999986 88899999999999998874
No 111
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.67 E-value=2.7e-16 Score=132.91 Aligned_cols=104 Identities=24% Similarity=0.472 Sum_probs=92.3
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|++.+...+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|.++||++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 45889999999988777889999999999999999999999999999875 5899999988765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.+||++.+
T Consensus 100 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAA---TKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEE---EEcCCCCHHHHHHHHHHhh
Confidence 998888764 7889999999999998764
No 112
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=2.8e-16 Score=134.10 Aligned_cols=100 Identities=12% Similarity=0.238 Sum_probs=86.3
Q ss_pred CCeEEeChhhHHHHHhC---CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCc
Q 007882 93 KDVVVLKERNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~P 169 (586)
..+..++.++|.+.+.. ++++||+|||+||++|+.+.|.|.++++++. ++.|+.||+++.. ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~---~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI---EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC---SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc---ccCCCCCCC
Confidence 45788899999998854 3699999999999999999999999999874 4999999998875 789999999
Q ss_pred EEEEEeCC-eeeeecCCC-------CHHHHHHHHHHhc
Q 007882 170 TIYFFVDG-QHKAYNGGR-------TKDAIVTWIKKKI 199 (586)
Q Consensus 170 t~~~~~~g-~~~~~~g~~-------~~~~l~~~i~~~~ 199 (586)
|+++|++| ...++.|.. +.+.|.++|.+..
T Consensus 83 t~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 83 TIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 99999999 456777765 7888999998763
No 113
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.67 E-value=2.1e-16 Score=130.11 Aligned_cols=104 Identities=31% Similarity=0.604 Sum_probs=92.3
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
+.+..++.++|++.+. +++++|+||++||++|+.+.|.|.++++.+... ..+.++.+|++.+. +.+++|.++||+
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 4688999999999885 779999999999999999999999999987643 47999999998865 578999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
++|++|+.+. ++.|..+.+.|.+||.+++
T Consensus 83 ~~~~~g~~~~---~~~g~~~~~~l~~~l~~~a 111 (111)
T 3uvt_A 83 LLFRGGKKVS---EHSGGRDLDSLHRFVLSQA 111 (111)
T ss_dssp EEEETTEEEE---EECSCCSHHHHHHHHHHHC
T ss_pred EEEeCCcEEE---eccCCcCHHHHHHHHHhcC
Confidence 9999998764 7899999999999998863
No 114
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.67 E-value=3.5e-16 Score=127.87 Aligned_cols=104 Identities=22% Similarity=0.410 Sum_probs=92.3
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+. +..+++.++||++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 45788999999988877789999999999999999999999999999875 5999999988765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.+||++++
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 80 LVRDGKVID---KKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHTC
T ss_pred EEeCCEEEE---EecCCCCHHHHHHHHHhcC
Confidence 999888764 7889999999999998753
No 115
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=7.7e-16 Score=131.39 Aligned_cols=107 Identities=16% Similarity=0.168 Sum_probs=91.1
Q ss_pred CCCeEEEeCcchhHHhhcc--CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccccccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDE--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~~~~~i~~~Pt~ 509 (586)
.+.+..++.++|.+.+... ++++||+|||+||++|+.+.|.|+++++.+. .+.|+.+|++.+. ..|+|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 4568888999999988653 3689999999999999999999999999874 4999999998764 78999999999
Q ss_pred EEEeCCCcccCcccccccc-------CHHHHHHHHHhcCCCCc
Q 007882 510 LFFPAGNKSFDPINVDVDR-------TVVALYKFLKKNASIPF 545 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~-------~~~~l~~~i~~~~~~~~ 545 (586)
++|++|+.+. ++.|.. +.+.|.++|.++..++.
T Consensus 85 ~~~~~G~~v~---~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~ 124 (135)
T 2dbc_A 85 FVYKNGQIEG---KFIGIIECGGINLKLEELEWKLSEVGAIQS 124 (135)
T ss_dssp EEESSSSCSE---EEESTTTTTCTTCCHHHHHHHHHHHTSSCC
T ss_pred EEEECCEEEE---EEEeEEeeCCCcCCHHHHHHHHHHcCCccc
Confidence 9999998875 566643 78999999999876553
No 116
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=3.3e-16 Score=133.06 Aligned_cols=104 Identities=23% Similarity=0.507 Sum_probs=88.6
Q ss_pred EEeChhhHHHHH----hCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCC--CcHHHHHHcCCC
Q 007882 96 VVLKERNFSDVI----ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT--EENELAHEYDVQ 166 (586)
Q Consensus 96 ~~l~~~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~ 166 (586)
+.++..+|++.+ .++++++|+||++||++|+.+.|.+ ..+.+.+.. .+.++.||++ .+..++++|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR---HFVNLKMDMEKGEGVELRKKYGVH 85 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH---HSEEEEECSSSTTHHHHHHHTTCC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc---CeEEEEEecCCcchHHHHHHcCCC
Confidence 344667787766 3689999999999999999999999 777776655 6899999998 478899999999
Q ss_pred CCcEEEEE-eCC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 167 GFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 167 ~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++||+++| ++| ...++.|..+.+.|.++|++.+.+.
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp SSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999 588 4568899999999999999988664
No 117
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.5e-16 Score=134.44 Aligned_cols=109 Identities=33% Similarity=0.573 Sum_probs=94.9
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CCcEEEEEEeCCccc--cccCCCCcCc
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG--VDSIVIAKMDGTTNE--HHRAKSDGFP 507 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~i~~~~id~~~~~--~~~~~i~~~P 507 (586)
.+.+..++.++|.+.+...+++++|+||++||++|+.+.|.|.++++.+.. ...+.++.+|++.+. +..++|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 457899999999998877789999999999999999999999999999861 125999999998764 4789999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
|+++|.+|+.+. ++.|.++.+.|.+||.+.+..
T Consensus 86 t~~~~~~g~~~~---~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 86 TIKIFQKGESPV---DYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp EEEEEETTEEEE---EECSCCSHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceE---EecCCCCHHHHHHHHHHHhhc
Confidence 999999987653 788999999999999988753
No 118
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=4.6e-16 Score=134.03 Aligned_cols=110 Identities=33% Similarity=0.663 Sum_probs=95.9
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.+.+..++.++|++.+ ..++++||+||++||++|+.+.|.|.++++.+.+. ..+.++.+|++.+. +..|+|.++||
T Consensus 16 ~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp ETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 5679999999999977 55789999999999999999999999999998763 25999999998764 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCcc
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 546 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 546 (586)
+++|++|+ +. ++.|.++.+.|.+||.+++.....
T Consensus 95 ~~~~~~G~-~~---~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 95 IKILKKGQ-AV---DYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp EEEEETTE-EE---ECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred EEEEECCc-EE---EcCCCCCHHHHHHHHHHhcCCCCC
Confidence 99998887 42 788999999999999999876543
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.65 E-value=4.1e-16 Score=128.65 Aligned_cols=103 Identities=20% Similarity=0.337 Sum_probs=91.3
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
+..++.++|++.+ .+++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+. +..++|.++||+++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 5678999999987 788999999999999999999999999999875 5888888887765 478999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
++|+.+. ++.|..+.+.|.+|+.++....
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 79 KDGEVVE---TSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHTTSCSC
T ss_pred eCCEEEE---EEeCCCCHHHHHHHHHHHHHhh
Confidence 9888764 7889999999999999888654
No 120
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.65 E-value=7.5e-16 Score=131.40 Aligned_cols=92 Identities=22% Similarity=0.403 Sum_probs=80.9
Q ss_pred HHHhCCCeEEEEEECCCChhhhhhhHHHH--HHHHHhhcCCCceEEEEEeC---CCcHHHHHHcCC---CCCcEEEEE-e
Q 007882 105 DVIENNKFVMVEFYAPWCGHCQALAPEYA--AAATELKSANESVVLAKVDA---TEENELAHEYDV---QGFPTIYFF-V 175 (586)
Q Consensus 105 ~~~~~~~~~lv~f~a~wC~~C~~~~p~~~--~~~~~~~~~~~~v~~~~vd~---~~~~~l~~~~~i---~~~Pt~~~~-~ 175 (586)
.....+++++|+||++||++|+.+.|.|. ++++.+++ ++.++.||+ +.+..++++|+| .++||+++| .
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~---~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~ 100 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK---HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNS 100 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH---HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECT
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC---CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECC
Confidence 33456899999999999999999999999 99998876 699999999 889999999999 999999999 6
Q ss_pred CC-eeeeecC-------CCCHHHHHHHHHHhc
Q 007882 176 DG-QHKAYNG-------GRTKDAIVTWIKKKI 199 (586)
Q Consensus 176 ~g-~~~~~~g-------~~~~~~l~~~i~~~~ 199 (586)
+| ....+.| ..+.+.+.+|+++..
T Consensus 101 ~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 101 DGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 88 4567777 678899999987753
No 121
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.65 E-value=2.5e-16 Score=131.51 Aligned_cols=106 Identities=25% Similarity=0.421 Sum_probs=93.3
Q ss_pred CCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 431 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 431 ~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
....+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+. +..++|.++||
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 3567888999999998878889999999999999999999999999998865 5889999988765 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. ++.|..+.+.|.+||++.+
T Consensus 89 ~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 89 VLAMKNGDVVD---KFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCcEEE---EEcCCCCHHHHHHHHHHHh
Confidence 99999888764 7889889999999998764
No 122
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.65 E-value=3.5e-16 Score=129.05 Aligned_cols=104 Identities=24% Similarity=0.462 Sum_probs=92.0
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+. +..++|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 45789999999998877789999999999999999999999999999865 4888888887765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.++|++.+
T Consensus 83 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 83 VYQGGEVAK---TIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHTHHHH
T ss_pred EEeCCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 999998764 7889999999999998764
No 123
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.65 E-value=8.4e-16 Score=144.18 Aligned_cols=105 Identities=20% Similarity=0.285 Sum_probs=92.0
Q ss_pred eEEeChhhHHHHHhCCCeE-EEEEECCCChhhhhhhHHHHHHHHHhhcC-CCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 95 VVVLKERNFSDVIENNKFV-MVEFYAPWCGHCQALAPEYAAAATELKSA-NESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~-lv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
...+++++++.+...++++ +|+|||+||++|+.+.|.|.+++..+.+. ..++.++.||+++++.++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567888898887666666 99999999999999999999999998721 126999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 173 ~~~~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+|++| ...++.|..+.+.|.+||.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999 5578999999999999998765
No 124
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.65 E-value=1.9e-15 Score=140.60 Aligned_cols=102 Identities=29% Similarity=0.545 Sum_probs=92.9
Q ss_pred CCeEEeChhhHHHHHhCCCeEEEEEEC--CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEe-----CCCcHHHHHHcCC
Q 007882 93 KDVVVLKERNFSDVIENNKFVMVEFYA--PWCGHCQALAPEYAAAATELKSANESVVLAKVD-----ATEENELAHEYDV 165 (586)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~lv~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd-----~~~~~~l~~~~~i 165 (586)
..|+.|++.+|+.++..++++||.||| |||+ +.|.|.++++.+.+ ..++.|+.|| |+.++.+|++|+|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~-~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS-SDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT-CTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC-CCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 468999999999999888999999999 9999 99999999999875 2369999999 5558999999999
Q ss_pred C--CCcEEEEEeCCe---eeeecCCCCHHHHHHHHHHhc
Q 007882 166 Q--GFPTIYFFVDGQ---HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 166 ~--~~Pt~~~~~~g~---~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+ ++||+++|++|. ...|.|.++.+.|.+||.+..
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999996 679999999999999999884
No 125
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.64 E-value=9.6e-14 Score=145.61 Aligned_cols=307 Identities=16% Similarity=0.258 Sum_probs=221.9
Q ss_pred CCeEEe-ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..+ +.++++..+..++.++|.|+.++|..| .+.|.+++..+.+ .+.|+.++ +..+++++++...| +
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~---~~~F~~~~---~~~~~~~~~v~~~~-i 179 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRD---NYRFAHTN---VESLVNEYDDNGEG-I 179 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT---TSCEEEEC---CHHHHHHHCSSSEE-E
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhcc---CceEEEEC---CHHHHHHhCCCCCc-E
Confidence 346666 678899999888999999999987765 5688999999876 67888764 56899999998866 7
Q ss_pred EEEe--------CCeeeeec-CCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecCCCCcc-------h
Q 007882 172 YFFV--------DGQHKAYN-GGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSE-------S 235 (586)
Q Consensus 172 ~~~~--------~g~~~~~~-g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~~-------~ 235 (586)
++|+ ++....|. |..+.+.|.+||....-|.+.+++. +.+..+.. .+ .+++|+....... .
T Consensus 180 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-~n~~~~~~-~~-~~v~~~~~~~~~~~~~~~~~~ 256 (481)
T 3f8u_A 180 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLIQG-KD-LLIAYYDVDYEKNAKGSNYWR 256 (481)
T ss_dssp EEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-TTHHHHTT-SS-EEEEEECCCTTTCHHHHHHHH
T ss_pred EEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh-hHHHHhcC-CC-ceEEEEecccccchhhHHHHH
Confidence 7777 34667888 8899999999999999888888765 44555553 33 3444443221111 2
Q ss_pred HHHHHhc-cccCc---eeEEecCChh---HHHhcCCCC-CCCCCeeEEeccCCcceecccCCCChh--HHHHHHHhcC--
Q 007882 236 EVLADAS-RLEDD---VNFYQTTNPD---VAKIFHLDS-KVNRPALVMVKKETEKISYFDGKFDKS--TIADFVFSNK-- 303 (586)
Q Consensus 236 ~~f~~~~-~~~~~---~~F~~~~~~~---~~~~~~~~~-~~~~p~l~~~~~~~~~~~~y~g~~~~~--~i~~fi~~~~-- 303 (586)
..+..++ ++++. +.|..+.... .++.||+.. ....|.++++. .++....+.+.++.+ .|..|+....
T Consensus 257 ~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~-~~~~ky~~~~~~t~e~~~l~~f~~~~~~g 335 (481)
T 3f8u_A 257 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRT-AKGEKFVMQEEFSRDGKALERFLQDYFDG 335 (481)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEEC-SSSCEEECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEc-CCCcccCCCcccCccHHHHHHHHHHHhcC
Confidence 3344455 55555 8998876544 566889873 23579999887 444455677888888 9999986531
Q ss_pred ---------------CCceeecCCCcccccccCCcccEEEEEEec--cchhhHHHHHHHHHHhccC--ceEEEEEECCCc
Q 007882 304 ---------------LPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDNE 364 (586)
Q Consensus 304 ---------------~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~l~~lA~~~~~--~~~f~~vd~~~~ 364 (586)
...+..++..++..+.....+.+++.|... ..|+...+.+.+++..|.+ .+.|+.+|++..
T Consensus 336 ~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~ 415 (481)
T 3f8u_A 336 NLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN 415 (481)
T ss_dssp CCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS
T ss_pred CcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch
Confidence 123556677777776655344445544444 7899999999999999987 599999998763
Q ss_pred ccccccccccCccCCCCceEEEecCCCC-CcccCCCCCCHHHHHHHHHHHhcCCCC
Q 007882 365 DVGKPVSEYFGITGEAPKVLAYTGNDDA-KKHILDGELTLDKIKTFGEDFLEGKLK 419 (586)
Q Consensus 365 ~~~~~~~~~~gi~~~~~p~~~i~~~~~~-~~y~~~~~~t~e~i~~fi~~~~~gkl~ 419 (586)
.+...+++.. .|+++++..++. ....+.|..+.+.+.+|+.........
T Consensus 416 ----~~~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 416 ----DVPSPYEVRG--FPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp ----CCCTTCCCCS--SSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCC
T ss_pred ----hhHhhCCCcc--cCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCccc
Confidence 4667788865 688888866644 367788899999999999998775544
No 126
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.64 E-value=3.2e-16 Score=127.65 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=76.5
Q ss_pred eCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCC
Q 007882 439 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGN 516 (586)
Q Consensus 439 ~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~ 516 (586)
+.++|++.+ ..+++++|+||++||++|+.+.|.++++++.+. ++.++.+|++.+. +.+++|.++||+++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457888876 678999999999999999999999999999873 4888888887765 5789999999999999998
Q ss_pred cccCccccccccCHHHHHHHHHhcC
Q 007882 517 KSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 517 ~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
.+. ++.|..+.+.|.++|+++.
T Consensus 83 ~~~---~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EIL---RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEE---EEESSCCHHHHHHHHHTTC
T ss_pred EEE---EEeCCcCHHHHHHHHHHhh
Confidence 764 7889999999999998764
No 127
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=1e-15 Score=131.05 Aligned_cols=112 Identities=24% Similarity=0.399 Sum_probs=95.2
Q ss_pred CCCeEEEeCcchhHHhhc-----------cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--c
Q 007882 432 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H 498 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-----------~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~ 498 (586)
...+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.|.++++.+.+ .+.++.+|++.+. +
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHH
Confidence 456889999999998854 468999999999999999999999999999875 5889999988765 5
Q ss_pred ccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCCCccccC
Q 007882 499 HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQK 549 (586)
Q Consensus 499 ~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~ 549 (586)
..++|.++||+++| ++|+.+ ++.|..+.+.|.+||++.+....-.+.
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~~~----~~~G~~~~~~l~~~l~~~~~~~~~~~~ 133 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGKPE----MAQGAMPKASFKKAIDEFLLKKEGHHH 133 (136)
T ss_dssp HHTTCCSSCEEEEECSSSCCE----EEESCCCHHHHHHHHHHHHTSCTTSSC
T ss_pred HHcCCCCCCEEEEECCCCcEE----EEeCCCCHHHHHHHHHHHhhccCCCCC
Confidence 78999999999999 677664 678999999999999998876544443
No 128
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.64 E-value=4.8e-16 Score=126.80 Aligned_cols=101 Identities=27% Similarity=0.385 Sum_probs=90.0
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEE
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILF 511 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~ 511 (586)
.+..++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++||+++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 57889999999988 789999999999999999999999999999876 4888888887765 57899999999999
Q ss_pred EeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 512 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 512 ~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++|+.+. ++.|..+.++|.++|++++
T Consensus 80 ~~~G~~~~---~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVD---KVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEE---EEeCCCCHHHHHHHHHHhC
Confidence 99998764 7889999999999998753
No 129
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.64 E-value=9.9e-16 Score=130.33 Aligned_cols=127 Identities=21% Similarity=0.333 Sum_probs=108.8
Q ss_pred cCCCceeecCCCcccccccCCcccEEEEEEeccchhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCC
Q 007882 302 NKLPLVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 381 (586)
Q Consensus 302 ~~~p~v~~lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~ 381 (586)
++.|++.++|.+++..++..+.+.++.++.....|+.+...++++|++|++++.|+++|.+. ...++..||+...+.
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~---~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA---FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT---TGGGTTTTTCCSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH---hHHHHHHcCCCcccC
Confidence 67899999999999888776666555555555789999999999999999999999999886 346889999988778
Q ss_pred ceEEEecCCCCCcccCC--CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 007882 382 KVLAYTGNDDAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 431 (586)
Q Consensus 382 p~~~i~~~~~~~~y~~~--~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~ 431 (586)
|+++++....+.+|.+. +.++.+.|.+|++++++|+++|++||+++|+.+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 99988876445667775 889999999999999999999999999999874
No 130
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.64 E-value=4.9e-16 Score=127.47 Aligned_cols=103 Identities=25% Similarity=0.468 Sum_probs=91.2
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+.+ .+.++.+|++.+. +..+++.++||++
T Consensus 4 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 567889999999987 4589999999999999999999999999999876 5788888887665 5789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|..+.+.|.++|++.+
T Consensus 81 ~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVD---SLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEE---eeeccCCHHHHHHHHHHHh
Confidence 999998875 7889999999999999875
No 131
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.64 E-value=6.3e-16 Score=129.23 Aligned_cols=110 Identities=35% Similarity=0.667 Sum_probs=95.1
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.|.++++.+... ..+.++.+|++.+. +.+++|.++||
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 3568899999999876 56889999999999999999999999999998753 36889999988754 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
+++|++|+.+ .+.++.|..+.+.|.+||+++++.
T Consensus 85 ~~~~~~g~~~-~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 85 IKFFRNGDTA-SPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEESSCSS-SCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEeCCCcC-CcccccCccCHHHHHHHHHhccCC
Confidence 9999999875 345889999999999999988764
No 132
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.64 E-value=5.8e-16 Score=132.17 Aligned_cols=99 Identities=22% Similarity=0.446 Sum_probs=84.2
Q ss_pred eChhhHHHHHhC--CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeC----CCcHHHHHHcCCCCC
Q 007882 98 LKERNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDA----TEENELAHEYDVQGF 168 (586)
Q Consensus 98 l~~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~----~~~~~l~~~~~i~~~ 168 (586)
.+.++++..+.. ++++||+||++||++|+.+.|.+ .++++.+++ +.++.||+ +....++++|+|.++
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~----~~~~~vd~~~~~~~~~~l~~~~~v~~~ 92 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD----TVLLQANVTANDAQDVALLKHLNVLGL 92 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT----SEEEEEECTTCCHHHHHHHHHTTCCSS
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----cEEEEEeCCCCcchHHHHHHHcCCCCC
Confidence 346778877753 89999999999999999999999 888888754 99999999 456789999999999
Q ss_pred cEEEEE-eCCee---eeecCCCCHHHHHHHHHHhcC
Q 007882 169 PTIYFF-VDGQH---KAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 169 Pt~~~~-~~g~~---~~~~g~~~~~~l~~~i~~~~~ 200 (586)
||+++| ++|+. .++.|..+.+.|.+++.+.-+
T Consensus 93 Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 93 PTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp SEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 999999 68855 489999999999999987654
No 133
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.64 E-value=3.2e-16 Score=146.24 Aligned_cols=112 Identities=23% Similarity=0.452 Sum_probs=98.0
Q ss_pred CCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcC
Q 007882 429 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 429 ~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
....+.+..++.++|++.+.+++++++|+||++||++|+.+.|.|.++++.+++ ++.++.+|++.+. +.+++|.++
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 85 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGI 85 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSB
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcC
Confidence 344678999999999998878899999999999999999999999999999876 4788888887764 588999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCc
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 545 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 545 (586)
||+++|++|+.+. ++.|..+.+.|.+||.+.+....
T Consensus 86 Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 86 PTLLLFKNGEVAA---TKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp SEEEEEETTEEEE---EEESCCCHHHHHHHHHHHSCCSC
T ss_pred CEEEEEECCeEEE---EeccccChHHHHHHHHhhccccc
Confidence 9999999998764 78899999999999999986543
No 134
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.63 E-value=6e-16 Score=129.63 Aligned_cols=106 Identities=25% Similarity=0.439 Sum_probs=93.1
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+.+..++..+|...+...+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|.++||+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 88 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPTL 88 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 567899999999998877889999999999999999999999999999865 5888999988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|++|+.+. ++.|..+.+.|.++|++.+.
T Consensus 89 ~~~~~g~~~~---~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 89 ILFKDGQPVK---RIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHTCSCCC
T ss_pred EEEECCEEEE---EecCCCCHHHHHHHHHHHHh
Confidence 9999888764 78899999999999987654
No 135
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.63 E-value=9.2e-16 Score=124.87 Aligned_cols=101 Identities=27% Similarity=0.535 Sum_probs=89.5
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
+..++.++|++.+...+++++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++.+. +..+++.++||+++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 567899999998877789999999999999999999999999999876 4888899888764 578999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
++|+.+. ++.|..+.+.|.++|++.
T Consensus 80 ~~g~~~~---~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 80 KNGERKE---SIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp ETTEEEE---EEEECCCHHHHHHHHHHH
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHhh
Confidence 9988764 788999999999999875
No 136
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.63 E-value=3.2e-16 Score=130.13 Aligned_cols=103 Identities=18% Similarity=0.337 Sum_probs=87.9
Q ss_pred CCCeEEEeCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.......+.++|++.+.+ .+++++|+||++||++|+.+.|.|+++++.+.+ +.|+.+|++.+. +..|+|.++||
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccE
Confidence 345666778899998743 689999999999999999999999999998765 888999988765 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. ++.|. +.+.|.++|++.+
T Consensus 88 ~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 88 FQFFKKGQKVG---EFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEESSSSEEE---EEESC-CHHHHHHHHHHHC
T ss_pred EEEEeCCeEEE---EEcCC-CHHHHHHHHHHhC
Confidence 99999898874 67888 9999999998753
No 137
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.44 E-value=2e-17 Score=135.09 Aligned_cols=101 Identities=32% Similarity=0.661 Sum_probs=90.0
Q ss_pred eEEeChhhHHHHH-hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 95 VVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 95 v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
+..++.++|.+.+ ..+++++|.||++||++|+.+.|.+.++++.+.+ ++.++.||++.+..++++|+|.++||+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDENPNTAAQYGIRSIPTLLL 79 (106)
Confidence 5678888888654 6788999999999999999999999999998875 69999999999999999999999999999
Q ss_pred EeCC-eeeeecCCCCHHHHHHHHHHh
Q 007882 174 FVDG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 174 ~~~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
|++| ....+.|..+.+.+.++|.+.
T Consensus 80 ~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 80 FKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 9888 456888999999999988764
No 138
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=6.2e-16 Score=131.38 Aligned_cols=107 Identities=29% Similarity=0.519 Sum_probs=93.2
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+.+..++.++|+..+...+++++|+||++||++|+.+.|.|.++++.+.+ .+.++.+|++.+. +..++|.++||+
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 457899999999998877789999999999999999999999999999876 4888888888765 578999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|.+|+.+ ..++.|.++.+.|.+|+.+.+.
T Consensus 94 ~~~~~~~~~--~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKNK--PEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTTS--CEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCe--EEEeecCCCHHHHHHHHHHHHh
Confidence 999887762 2478999999999999998753
No 139
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.63 E-value=6.6e-16 Score=135.12 Aligned_cols=105 Identities=23% Similarity=0.506 Sum_probs=93.3
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+.+..++..+|.+.+ ..++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.+|++.+. +.+|+|+++||+
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 4567888999999988 7788999999999999999999999999999876 4889999988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|++|+.+. ++.|..+.+.|.+||++.++
T Consensus 123 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 123 ILFHKGRELA---RAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHHC
T ss_pred EEEeCCeEEE---EecCCCCHHHHHHHHHHHhc
Confidence 9999998864 78899999999999998765
No 140
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.63 E-value=2e-15 Score=120.16 Aligned_cols=97 Identities=20% Similarity=0.271 Sum_probs=82.5
Q ss_pred CeEEe-ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH----HHHHcCCCC-
Q 007882 94 DVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQG- 167 (586)
Q Consensus 94 ~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~- 167 (586)
....| +.++|+++++++++++|.|+|+||++|+...|.|+++++. + ++.++.||.++.+. ++.+++|++
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCchhhHHHHHHhCCccC
Confidence 34555 4678999998899999999999999999999999999974 3 59999999999976 799999995
Q ss_pred CcEEEEEeCCee--eeecCCCCHHHHHHHH
Q 007882 168 FPTIYFFVDGQH--KAYNGGRTKDAIVTWI 195 (586)
Q Consensus 168 ~Pt~~~~~~g~~--~~~~g~~~~~~l~~~i 195 (586)
.||+++|++|+. ..-.+..+.+.|.+.+
T Consensus 82 sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999999943 3467888888887654
No 141
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.63 E-value=8e-16 Score=127.56 Aligned_cols=105 Identities=22% Similarity=0.387 Sum_probs=93.0
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|...+...+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 45889999999998877889999999999999999999999999999876 4888888888765 5789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+|++|+.+. ++.|..+.+.|.+||++.+.
T Consensus 85 ~~~~G~~~~---~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILD---STEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEE---EecCCCCHHHHHHHHHHHhc
Confidence 999888764 78899999999999998754
No 142
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.63 E-value=6e-16 Score=126.48 Aligned_cols=103 Identities=22% Similarity=0.476 Sum_probs=90.7
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEE
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILF 511 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~ 511 (586)
.+..++.++|.+.+...+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++||+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMV 79 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEE
Confidence 3678899999998877789999999999999999999999999999875 4888889887764 47899999999999
Q ss_pred EeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 512 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 512 ~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++|+.+. ++.|..+.+.|.++|++.+
T Consensus 80 ~~~G~~~~---~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 80 FKGGKKCE---TIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp ESSSSEEE---EEESCCCHHHHHHHHHHHC
T ss_pred EeCCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 99888764 7889999999999998765
No 143
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.63 E-value=2e-16 Score=147.60 Aligned_cols=134 Identities=18% Similarity=0.242 Sum_probs=107.1
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEE-eCcchhHHhhc--cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC
Q 007882 407 KTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLD--ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV 483 (586)
Q Consensus 407 ~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l-~~~~f~~~v~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~ 483 (586)
..|++.+..+++.++.++.. +....+.|..+ +..+|.+.+.. .+++|||.|||+||++|+.+.|.|.+++..+.+
T Consensus 87 e~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~- 164 (245)
T 1a0r_P 87 ENCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM- 164 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-
Confidence 46889999999988876643 33446778888 68999998854 378999999999999999999999999999864
Q ss_pred CcEEEEEEeCCccc-cccCCCCcCcEEEEEeCCCcccCccccc---c-ccCHHHHHHHHHhcCCCC
Q 007882 484 DSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVD---V-DRTVVALYKFLKKNASIP 544 (586)
Q Consensus 484 ~~i~~~~id~~~~~-~~~~~i~~~Pt~~~~~~g~~~~~~~~~~---g-~~~~~~l~~~i~~~~~~~ 544 (586)
+.|+.||++... +..|+|.++||+++|++|+.+.+.+.+. | ..+.+.|..||.++..++
T Consensus 165 --v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l~ 228 (245)
T 1a0r_P 165 --VKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGLLP 228 (245)
T ss_dssp --SEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTCSC
T ss_pred --CEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCCCC
Confidence 889999987633 4689999999999999998765333332 2 257889999999987653
No 144
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.63 E-value=1.3e-15 Score=125.50 Aligned_cols=103 Identities=24% Similarity=0.384 Sum_probs=87.7
Q ss_pred CCCeEEEeCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC-ccc--cccCCCCcCc
Q 007882 432 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-TNE--HHRAKSDGFP 507 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~-~~~--~~~~~i~~~P 507 (586)
.+.+..++.++|.+.+.. .+++++|+||++||++|+.+.|.|.++++.+.+ +.++.+|++ .+. +..++|.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~---v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC---eEEEEEecCcchHHHHHHcCCCeee
Confidence 467899999999998854 578999999999999999999999999998764 888999987 332 4789999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++++++|+.+. ++.|. +.+.|.++|++..
T Consensus 81 t~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKILKENSVVG---EVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEESSSSEEE---EEESS-CHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE---EEcCC-CHHHHHHHHHHhh
Confidence 999999998764 67776 4899999998753
No 145
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.63 E-value=3.7e-16 Score=134.47 Aligned_cols=106 Identities=23% Similarity=0.343 Sum_probs=94.5
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
...+..++.++|.+.+...+++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+. +..++|.++||+
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 457899999999977778899999999999999999999999999999876 5888888887765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|++|+.+. ++.|..+.+.|.+||++.+.
T Consensus 83 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 83 KFFCHGRPVW---EQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEEETTEEEE---EEESSCCHHHHHHHHHHHHH
T ss_pred EEEeCCcEEE---EEcCCCCHHHHHHHHHHHhc
Confidence 9999998864 78899999999999998764
No 146
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.62 E-value=1.1e-15 Score=133.00 Aligned_cols=106 Identities=21% Similarity=0.509 Sum_probs=94.6
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+.+..+++++|.+.+ ..+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..|+|.++||+
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 4678999999999988 7789999999999999999999999999999875 5888899888765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
++|++|+.+. ++.|..+.+.|.+||++++..
T Consensus 114 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMID---MLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEE---EESSCCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEE---EEeCCCCHHHHHHHHHHHhcc
Confidence 9999998874 789999999999999987653
No 147
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.62 E-value=1.6e-16 Score=146.60 Aligned_cols=132 Identities=17% Similarity=0.236 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEE-eCcchhHHhhccC--CcEEEEEeCCCChhhhhhhHHHHHHHHHhc
Q 007882 405 KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 481 (586)
Q Consensus 405 ~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l-~~~~f~~~v~~~~--~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 481 (586)
+...|++.+..+++....++.. +....+.+..+ +.++|.+.+.+.. +++||+||++||++|+.+.|.|.+++..+.
T Consensus 72 ~d~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 72 EDEGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 4567999999999987765543 33446778888 8899999886543 899999999999999999999999999874
Q ss_pred CCCcEEEEEEeCCcc-ccccCCCCcCcEEEEEeCCCcccCccccccccC-------HHHHHHHHHhcCCC
Q 007882 482 GVDSIVIAKMDGTTN-EHHRAKSDGFPTILFFPAGNKSFDPINVDVDRT-------VVALYKFLKKNASI 543 (586)
Q Consensus 482 ~~~~i~~~~id~~~~-~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~-------~~~l~~~i~~~~~~ 543 (586)
.+.|+.+|++.. .+..|+|.++||+++|++|+.+. ++.|..+ .+.|.+||.++.-+
T Consensus 151 ---~v~f~~vd~~~~~l~~~~~i~~~PTl~~~~~G~~v~---~~~G~~~~~g~~~~~~~Le~~L~~~g~l 214 (217)
T 2trc_P 151 ---MVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELIS---NFISVAEQFAEDFFAADVESFLNEYGLL 214 (217)
T ss_dssp ---TSEEEEEEHHHHTCSTTSCGGGCSEEEEEETTEEEE---EETTGGGGSCSSCCHHHHHHHHHTTTCS
T ss_pred ---CeEEEEEECCcHHHHHHCCCCCCCEEEEEECCEEEE---EEeCCcccCcccCCHHHHHHHHHHcCCC
Confidence 588999998721 34689999999999999998764 6667555 49999999988654
No 148
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.62 E-value=1.6e-15 Score=124.34 Aligned_cols=103 Identities=24% Similarity=0.447 Sum_probs=90.2
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEE
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILF 511 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~ 511 (586)
.+..++.++|+..+ ..+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++||+++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 46789999999654 6788999999999999999999999999999875 5889999988765 47899999999999
Q ss_pred EeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 512 FPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 512 ~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
|++|+.+. ++.|..+.+.|.+||++.++
T Consensus 79 ~~~g~~~~---~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 FKDGQPVE---VLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC-
T ss_pred EeCCcEee---eEeCCCCHHHHHHHHHHHhh
Confidence 99888764 78899999999999998765
No 149
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.62 E-value=8e-16 Score=129.08 Aligned_cols=105 Identities=21% Similarity=0.473 Sum_probs=90.7
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|.++||++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 45788999999887777889999999999999999999999999999876 5899999988765 5789999999999
Q ss_pred EEeCCCcccCccccccc----cCHHHHHHHHHhcCC
Q 007882 511 FFPAGNKSFDPINVDVD----RTVVALYKFLKKNAS 542 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~----~~~~~l~~~i~~~~~ 542 (586)
+|.+|..+. ++.|. ++.+.|.+||.+.+.
T Consensus 81 ~~~~~~~~~---~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 81 LYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEGGGT---EEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEeCCCccc---eeeccccCcCCHHHHHHHHHHHHH
Confidence 997776653 56665 799999999998764
No 150
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.62 E-value=2e-15 Score=126.68 Aligned_cols=100 Identities=16% Similarity=0.305 Sum_probs=85.7
Q ss_pred CeEEeChhhHHHHHhC--CCeEEEEEECC-------CChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC-------CCcH
Q 007882 94 DVVVLKERNFSDVIEN--NKFVMVEFYAP-------WCGHCQALAPEYAAAATELKSANESVVLAKVDA-------TEEN 157 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~--~~~~lv~f~a~-------wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-------~~~~ 157 (586)
.+...+.++|++.+.. +++++|+|||+ ||++|+.+.|.|.++++.+++ ++.|+.||+ +.+.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHHHHHCTTC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCchhhhchhH
Confidence 3667789999998875 89999999999 999999999999999988765 699999999 7888
Q ss_pred HHHHHcCCCCCcEEEEEeCCe-eeeecCCCCHHHHHHHHHH
Q 007882 158 ELAHEYDVQGFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKK 197 (586)
Q Consensus 158 ~l~~~~~i~~~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~ 197 (586)
.++++|+|.++||+++|++|. ...+.| .+.+.|.+||.+
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 999999999999999998773 344444 567888888764
No 151
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.61 E-value=1e-15 Score=119.21 Aligned_cols=83 Identities=31% Similarity=0.525 Sum_probs=76.2
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHH
Q 007882 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (586)
Q Consensus 111 ~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~ 190 (586)
.+++|.||++||++|+.+.|.|.++++++++ ++.++.||++++++++++|+|.++||+++ +|+. ++.|..+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHHH
Confidence 4789999999999999999999999998875 69999999999999999999999999998 8876 8899989999
Q ss_pred HHHHHHHhc
Q 007882 191 IVTWIKKKI 199 (586)
Q Consensus 191 l~~~i~~~~ 199 (586)
+.++|.+.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 152
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.61 E-value=1.2e-15 Score=124.29 Aligned_cols=101 Identities=20% Similarity=0.390 Sum_probs=87.5
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
+..++.++|+.. ...+++++|+||++||++|+.+.|.++++++.+.+ .+.++.+|++.+. +..+++.++||+++|
T Consensus 2 v~~l~~~~~~~~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQA-IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHH-HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHH-HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 567899999954 46788999999999999999999999999999875 4888888887765 478999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
++|+.+. ++.|..+.+.|.++|++.+
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVK---QLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHHHh
Confidence 9888764 7889999999999998754
No 153
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.61 E-value=1.4e-15 Score=141.75 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=96.7
Q ss_pred CCcCCCccCCCCCCCCCCCCCCCCCCCCCCeEEe-ChhhHHHHHh---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhh
Q 007882 65 DDDFSDDFDDENYHDFDDSEYKEPEIDDKDVVVL-KERNFSDVIE---NNKFVMVEFYAPWCGHCQALAPEYAAAATELK 140 (586)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~ 140 (586)
++.|...|...+...+..... +....+.|..+ +..+|...+. .++++||+|||+||++|+.+.|.|.+++.++.
T Consensus 86 De~fL~~~r~~Rl~el~~~~~--~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~ 163 (245)
T 1a0r_P 86 DENCLRKYRRQCMQDMHQKLS--FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP 163 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC--CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHHHHHHhh--ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC
Confidence 344455554444433332211 12234568889 7999999885 37899999999999999999999999999885
Q ss_pred cCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCee-eeecCC-------CCHHHHHHHHHHhc
Q 007882 141 SANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQH-KAYNGG-------RTKDAIVTWIKKKI 199 (586)
Q Consensus 141 ~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~-~~~~g~-------~~~~~l~~~i~~~~ 199 (586)
+ +.|+.||++. ..++.+|+|.++||+++|++|.. .++.|. .+.+.|..||.+..
T Consensus 164 ~----v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 164 M----VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp T----SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred C----CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 4 9999999976 67889999999999999999944 566664 34567888887763
No 154
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.6e-15 Score=147.67 Aligned_cols=112 Identities=26% Similarity=0.500 Sum_probs=94.2
Q ss_pred CCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc----cccccCCCCcC
Q 007882 431 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT----NEHHRAKSDGF 506 (586)
Q Consensus 431 ~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~----~~~~~~~i~~~ 506 (586)
..+.+..|+.++|++.+.+.+++++|+|||+||++|+.+.|.|.++++.+.+. +.++.+|++. ..+..++|.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~--~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV--VQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--SEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC--cEEEEEEccCccCHHHHHhCCCCcc
Confidence 35678999999999998777889999999999999999999999999999763 6666666653 23578999999
Q ss_pred cEEEEEeCCCcc--------------cCccccccccCHHHHHHHHHhcCCCC
Q 007882 507 PTILFFPAGNKS--------------FDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 507 Pt~~~~~~g~~~--------------~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
||+++|++|+.+ ..+..|.|.++.+.|.+|+.+++...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~ 144 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSY 144 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCC
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccc
Confidence 999999998720 02458999999999999999988654
No 155
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.61 E-value=7.7e-16 Score=141.99 Aligned_cols=102 Identities=18% Similarity=0.291 Sum_probs=88.8
Q ss_pred CCCeEEe-ChhhHHHHHhC---CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 92 DKDVVVL-KERNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 92 ~~~v~~l-~~~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
-..|..+ +..+|.+.+.. ++++||.||++||++|+.+.|.|.+++..+. .+.|+.||++ ++.++.+|+|.+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~-~~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS-NTGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH-HHTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC-cHHHHHHCCCCC
Confidence 3568888 89999998854 3899999999999999999999999999884 4999999998 778999999999
Q ss_pred CcEEEEEeCC-eeeeecCCCCH-------HHHHHHHHHh
Q 007882 168 FPTIYFFVDG-QHKAYNGGRTK-------DAIVTWIKKK 198 (586)
Q Consensus 168 ~Pt~~~~~~g-~~~~~~g~~~~-------~~l~~~i~~~ 198 (586)
+||+++|++| ...++.|.... +.|..||.+.
T Consensus 173 ~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 LPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999999 45678887764 8888888765
No 156
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.61 E-value=1.4e-15 Score=131.22 Aligned_cols=107 Identities=21% Similarity=0.363 Sum_probs=90.4
Q ss_pred CCCeEEEeCcchhHHhhc-----------cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--c
Q 007882 432 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H 498 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-----------~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~ 498 (586)
.+.+..++..+|...+.+ .+++++|+||++||++|+.+.|.|.++++.+.+ .+.++.+|++.+. +
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPELA 98 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHHH
Confidence 567889999999998865 478999999999999999999999999999876 5888888887765 5
Q ss_pred ccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 499 HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 499 ~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
..|+|.++||+++|..+..+ .++.|..+.+.|.+||++.+..
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~~---~~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGEP---QVNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHTTCCSSSEEEEECSSSCC---EEEESCCCHHHHHHHHHHTTC-
T ss_pred HHcCCCCcCEEEEEeCCCCE---EEEeCCCCHHHHHHHHHHHHcc
Confidence 78999999999999554443 2788999999999999988753
No 157
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=2.5e-15 Score=126.79 Aligned_cols=104 Identities=27% Similarity=0.492 Sum_probs=89.2
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+.+..++.++|++.+. +.++|+||++||++|+.+.|.|.++++.+.+ .++.++.+|++.+. +.+++|.++||+
T Consensus 6 ~~~v~~l~~~~f~~~~~---~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLE---GDWMIEFYAPWCPACQNLQPEWESFAEWGED-LEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTS---SEEEEEEECSSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhC---CCEEEEEECCCCHHHHHHhHHHHHHHHHhcc-CCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 46789999999998662 2499999999999999999999999998874 35888999988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
++|++|+. . ++.|..+.+.|.+||.++...
T Consensus 82 ~~~~~G~~-~---~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 82 YHCKDGEF-R---RYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp EEEETTEE-E---ECCSCCCHHHHHHHHHTCGGG
T ss_pred EEEeCCeE-E---EeecCCCHHHHHHHHHHHhhc
Confidence 99988874 2 789999999999999988743
No 158
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.60 E-value=2.6e-15 Score=122.69 Aligned_cols=100 Identities=18% Similarity=0.275 Sum_probs=83.4
Q ss_pred eEEE-eCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 435 VKIV-VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 435 v~~l-~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+..+ +.++|++.+.+ .+++++|+||++||++|+.+.|.++++++.+. ++.++.+|++.+. +..++|.++||++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 4455 45799998754 67899999999999999999999999999983 4889999988765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.|. ..++|.++|++++
T Consensus 80 ~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 80 FFRNKVRID---QYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp EEETTEEEE---EEESS-CHHHHHHHHHHHH
T ss_pred EEECCeEEE---EEeCC-CHHHHHHHHHHhc
Confidence 999998764 67784 4566999998764
No 159
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.60 E-value=2e-15 Score=122.50 Aligned_cols=101 Identities=20% Similarity=0.362 Sum_probs=88.3
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
|..++.++|++.+ ..+++++|+||++||++|+.+.|.++++++.+.+ +.++.+|++.+. +..+++.++||+++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4578899999988 6688999999999999999999999999998865 888888887765 478999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|+.+. ++.|..+.+.|.+||++.++
T Consensus 77 ~~g~~~~---~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVD---EIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhh---hccCCCCHHHHHHHHHHHhc
Confidence 9888764 78899999999999988653
No 160
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.60 E-value=2.6e-15 Score=126.16 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=88.7
Q ss_pred CCCeEEEeC-cchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~-~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
..-+..++. ++|++.+ ..++++||+||++||++|+.+.|.|.++++.+. ++.|+.+|++.+. +..++|.++||
T Consensus 18 ~~mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt 93 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPT 93 (125)
T ss_dssp CSCCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 334888998 9999987 778999999999999999999999999999874 4889999988765 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. ++.| .+.+.|.++|++.+
T Consensus 94 ~~i~~~G~~~~---~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 94 FIIARSGKMLG---HVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp EEEEETTEEEE---EEES-SCHHHHHHHHHHHH
T ss_pred EEEEeCCeEEE---EEeC-CCHHHHHHHHHHHh
Confidence 99999998764 6778 68899999998765
No 161
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.60 E-value=1.8e-15 Score=124.02 Aligned_cols=100 Identities=23% Similarity=0.456 Sum_probs=84.6
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEE
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILF 511 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~ 511 (586)
.....+.++|++.+ ..+++++|+||++||++|+.+.|.|+++++.+.+ +.++.+|++.+. +..++|.++||+++
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~---~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ---ADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 44556678999876 5689999999999999999999999999998854 778888887754 47899999999999
Q ss_pred EeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 512 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 512 ~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++|+.+. ++.|. +.++|.++|++++
T Consensus 84 ~~~G~~~~---~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVA---KVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEE---EEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEE---EEeCC-CHHHHHHHHHhhC
Confidence 99888764 67786 6799999998764
No 162
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.60 E-value=1.1e-15 Score=128.23 Aligned_cols=104 Identities=25% Similarity=0.508 Sum_probs=86.7
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCCh--------------hhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG--------------HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE- 497 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~--------------~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~- 497 (586)
+.+..++.++|++.+...+++++|+||++||+ +|+.+.|.|+++++.+.+ ++.++.+|++.+.
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPG 80 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHH
Confidence 35788999999988878889999999999999 999999999999998865 4888889888765
Q ss_pred -cccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 498 -HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 498 -~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+.+++|.++||+++|++|+.+. ++.|..+.++|.+||++.+
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAA---TKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEE---EEESCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCccCEEEEEECCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 5789999999999999998864 7889999999999998765
No 163
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.60 E-value=1.2e-15 Score=118.94 Aligned_cols=82 Identities=21% Similarity=0.383 Sum_probs=75.5
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHH
Q 007882 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAI 191 (586)
Q Consensus 112 ~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l 191 (586)
.++|.||++||++|+.+.|.|.++++++.+ ++.++.||+++++.++++|+|.++||+++ +|+. ++.|..+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHHHH
Confidence 468999999999999999999999999875 69999999999999999999999999998 8876 89999899999
Q ss_pred HHHHHHhc
Q 007882 192 VTWIKKKI 199 (586)
Q Consensus 192 ~~~i~~~~ 199 (586)
.++|.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998765
No 164
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.60 E-value=2.4e-16 Score=159.42 Aligned_cols=107 Identities=25% Similarity=0.426 Sum_probs=90.7
Q ss_pred CCCeEEeChhhHHHHHhCC--CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCC-----ceEEEEEeCCCcHHHHHHcC
Q 007882 92 DKDVVVLKERNFSDVIENN--KFVMVEFYAPWCGHCQALAPEYAAAATELKSANE-----SVVLAKVDATEENELAHEYD 164 (586)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~--~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~-----~v~~~~vd~~~~~~l~~~~~ 164 (586)
...++.++.++|+.++..+ +++||+|||+||++|+.+.|.|.++++.+..... .+.|+.|||+++++++++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 4568999999999988643 7899999999999999999999999999874321 59999999999999999999
Q ss_pred CCCCcEEEEEeCC---eeeeecCCCCHHHHHHHHHHhc
Q 007882 165 VQGFPTIYFFVDG---QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 165 i~~~Pt~~~~~~g---~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
|.++||+++|++| ....|.|.++.+.| .|+.+.+
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l 138 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHL 138 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTC
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhc
Confidence 9999999999744 35688898777766 6665554
No 165
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.59 E-value=2.5e-15 Score=130.38 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=85.6
Q ss_pred EeCcchhHHhh-ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeC
Q 007882 438 VVGNNFDEIVL-DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPA 514 (586)
Q Consensus 438 l~~~~f~~~v~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~ 514 (586)
.+.++|++.+. ..++++||.|||+||++|+.+.|.|+++++.+.+ .+.++.+|++.+. +..++|.++||+++|++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 35678999886 5689999999999999999999999999998865 4888999887765 47899999999999999
Q ss_pred CCcc---------cCcccccc-ccCHHHHHHHHHhcC
Q 007882 515 GNKS---------FDPINVDV-DRTVVALYKFLKKNA 541 (586)
Q Consensus 515 g~~~---------~~~~~~~g-~~~~~~l~~~i~~~~ 541 (586)
|+.+ . ++.| ..+.++|.++|+...
T Consensus 87 G~~v~~~~g~~~~~---~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 87 GQHMKVDYGSPDHT---KFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TEEEEEECSSSCCS---CEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCC---eEeeecCCHHHHHHHHHHHH
Confidence 9876 4 7788 889999999998764
No 166
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.58 E-value=3.6e-15 Score=125.02 Aligned_cols=104 Identities=21% Similarity=0.350 Sum_probs=89.9
Q ss_pred CCCeEEEeCcchhHHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcC
Q 007882 432 DGDVKIVVGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
...+..++.++|...+.. .+++++|+||++||++|+.+.|.|+++++.+.+ +.++.+|++.+. +..++|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCcc
Confidence 345677788999998865 688999999999999999999999999998765 888899988765 478999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
||+++|++|+.+. ++.|.. .+.|.+||++++.
T Consensus 89 Pt~~~~~~G~~~~---~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKD---RVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEE---EEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEE---EEeCcC-HHHHHHHHHHHhc
Confidence 9999999998764 788888 9999999998764
No 167
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.58 E-value=6.2e-15 Score=120.15 Aligned_cols=101 Identities=25% Similarity=0.436 Sum_probs=86.4
Q ss_pred eEEEeC-cchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 435 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 435 v~~l~~-~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+..++. ++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++||++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456777 789988754 688999999999999999999999999998864 6999999988765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+|++|+.+. ++.| .+.+.|.++|++.+
T Consensus 80 ~~~~G~~~~---~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVE---EFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEE---EEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEE---EEcC-CCHHHHHHHHHHhC
Confidence 999998764 6778 78899999998753
No 168
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.58 E-value=3.8e-15 Score=126.71 Aligned_cols=105 Identities=14% Similarity=0.190 Sum_probs=94.6
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC--CcEEE
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG--FPTIY 172 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~--~Pt~~ 172 (586)
+.++|..+|++.+..+.+++|.|||+ |++|+.+.|.|+++|+++++ ++.|+.||.++++.++..|||++ +||++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g---k~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG---VINFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT---TSEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC---eEEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 67899999999988888999999999 89999999999999999977 79999999999999999999999 99999
Q ss_pred EEeC--Ceeeeec--CCCCHHHHHHHHHHhcCCCc
Q 007882 173 FFVD--GQHKAYN--GGRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 173 ~~~~--g~~~~~~--g~~~~~~l~~~i~~~~~~~~ 203 (586)
++++ |....+. |..+.+.|.+|+...+...+
T Consensus 84 i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred EEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 9986 6556665 99999999999998875443
No 169
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.58 E-value=5.9e-14 Score=132.38 Aligned_cols=194 Identities=14% Similarity=0.159 Sum_probs=140.0
Q ss_pred hhhHHHHHhC-CCeEEEEEECCC--ChhhhhhhHHHHHHHHHhhcCCCc--eEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 100 ERNFSDVIEN-NKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANES--VVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 100 ~~~~~~~~~~-~~~~lv~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~--v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
.+.+.+++.. .++++|.||++| |++|+.+.|.+.++++.......+ +.|+.+|+++++.+|++|+|.++||+.++
T Consensus 14 ~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 14 RRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp HHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE
Confidence 3556666654 478999999999 999999999999999874210113 99999999999999999999999999999
Q ss_pred eCCeeeeecCCCCHHHHHHHHHHhcC--CCcccccchhHHHHhccc-CCeEEEEEecCCCCc---chHHHHHhcccc---
Q 007882 175 VDGQHKAYNGGRTKDAIVTWIKKKIG--PGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGS---ESEVLADASRLE--- 245 (586)
Q Consensus 175 ~~g~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~l~~~~~~-~~~~~i~~~~~~~~~---~~~~f~~~~~~~--- 245 (586)
+| ..+|.|......+..|+...+. .....+ +.+..+.+... .+..++.|+...+.. ....+..++...
T Consensus 94 -~g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 -GG-EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp -TT-TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred -CC-ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 77 7889998888888888877542 111222 32333333322 445566677776643 344555554322
Q ss_pred --CceeEEec---CChhHHHhcCCCCCCCCCeeEEeccCCcceecccCCCChhHHHHHHHhcCC
Q 007882 246 --DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFDGKFDKSTIADFVFSNKL 304 (586)
Q Consensus 246 --~~~~F~~~---~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 304 (586)
..+.|..+ .+++++.+|++.. .|++++ ++. ..|.|..+.++|..||....-
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~~---vPt~~i----~G~-~~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVMS---VPSIAI----NGY-LVFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCCS---SSEEEE----TTE-EEEESCCCHHHHHHHHHHHHT
T ss_pred cCCcEEEEEEECccCHHHHHHcCCee---eCeEEE----CCE-EEEeCCCCHHHHHHHHHHHhh
Confidence 56777664 4678899999985 899887 222 348999999999999987643
No 170
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.58 E-value=2.8e-16 Score=133.49 Aligned_cols=105 Identities=32% Similarity=0.618 Sum_probs=90.1
Q ss_pred CCeEEe-ChhhHHHHHhC----CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCC
Q 007882 93 KDVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (586)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~ 167 (586)
..+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.|+.||++++..++++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSGGGHHHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchHHHHHHcCCCc
Confidence 345666 46889988754 8999999999999999999999999998875 39999999999999999999999
Q ss_pred CcEEEEEeCCe-eeeecCCCCHHHHHHHHHHhcCCC
Q 007882 168 FPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 168 ~Pt~~~~~~g~-~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
+||++++++|+ ..++.| .+.+.|.++|.+.+...
T Consensus 90 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 90 MPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp SCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred cceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 99999999884 456777 58889999999987643
No 171
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.58 E-value=3.3e-13 Score=136.75 Aligned_cols=305 Identities=14% Similarity=0.166 Sum_probs=200.4
Q ss_pred cccccchhHHHHhcccCCeEEEEEecCCCCc---chHHHHHhc-cc------cCceeEEecC---ChhHHHhcCCCCCCC
Q 007882 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGS---ESEVLADAS-RL------EDDVNFYQTT---NPDVAKIFHLDSKVN 269 (586)
Q Consensus 203 ~~~i~~~~~l~~~~~~~~~~~i~~~~~~~~~---~~~~f~~~~-~~------~~~~~F~~~~---~~~~~~~~~~~~~~~ 269 (586)
+..++. +++++.+.+.+.++|.|+..++.. ....|..++ .+ ...+.|+.+. ...+++++++..
T Consensus 7 v~~l~~-~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~--- 82 (382)
T 2r2j_A 7 ITSLDT-ENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK--- 82 (382)
T ss_dssp -CBCCT-TTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE---
T ss_pred eEECCH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc---
Confidence 444443 667777777888888888887643 344566655 33 3447887754 678999999986
Q ss_pred CCeeEEeccCCcceecccCCCChhHHHHHHHhcCCCceeecCC-CcccccccCCcccEEEEEEeccchhhHHHHHHHHHH
Q 007882 270 RPALVMVKKETEKISYFDGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAK 348 (586)
Q Consensus 270 ~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lA~ 348 (586)
.|++++|+........|.|..+.+.|.+||.....|.+..++. +.+.. +..... .++.|....+ ......|..+|.
T Consensus 83 ~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~-~~v~ff~~~~-~~~~~~f~~~A~ 159 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKR-NIIGYFEQKD-SDNYRVFERVAN 159 (382)
T ss_dssp ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CC-EEEEEESCSS-SHHHHHHHHHHH
T ss_pred CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCC-EEEEEECCCC-ChhHHHHHHHHH
Confidence 8999999754322225999999999999999998888888854 45555 333333 3444443322 234567999999
Q ss_pred hccCceEEEEEECCCcccccccccccCccCCCCceEEEecCC-CCCcccCCCCC-CHHHHHHHHHHHhcCCCCCCCCCCC
Q 007882 349 SFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILDGEL-TLDKIKTFGEDFLEGKLKPFFKSDP 426 (586)
Q Consensus 349 ~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~-~~~~y~~~~~~-t~e~i~~fi~~~~~gkl~~~~ks~~ 426 (586)
.+++++.|+.... .+...+++.. .| +++...+ ......|.+.+ +.+.|.+|+....-
T Consensus 160 ~~~~~~~F~~~~~-------~~~~~~~v~~--~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~----------- 218 (382)
T 2r2j_A 160 ILHDDCAFLSAFG-------DVSKPERYSG--DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV----------- 218 (382)
T ss_dssp HHTTTCEEEEEES-------CC----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS-----------
T ss_pred HhhccceEEEEeh-------hhHHhhCCCC--Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc-----------
Confidence 9999999888774 2345667753 46 5555442 23456677877 89999999988642
Q ss_pred CCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCC
Q 007882 427 IPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKS 503 (586)
Q Consensus 427 ~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i 503 (586)
..+..++..++.+.. ..+.+++|.|+.++|.. |..+...+.+++..+++ .+.|+.+|+.... +..+++
T Consensus 219 ------p~v~elt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~--~i~f~~id~~~~~~~~~~~gl 289 (382)
T 2r2j_A 219 ------PLVREITFENGEELT-EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG--TINFLHADCDKFRHPLLHIQK 289 (382)
T ss_dssp ------CSSEECCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT--TSEEEEEETTTTHHHHHHTTC
T ss_pred ------CceEecChhhHHHHh-cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC--eeEEEEEchHHhHHHHHHcCC
Confidence 346788888888864 66788999999999843 55555666666656554 7999999988654 356777
Q ss_pred C--cCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCc
Q 007882 504 D--GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 545 (586)
Q Consensus 504 ~--~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 545 (586)
. .+|.++++..++.. ..-.+.+..+.+.|.+|+.+...-++
T Consensus 290 ~~~~~P~i~i~~~~~~y-~~~~~~~~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 290 TPADCPVIAIDSFRHMY-VFGDFKDVLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp CGGGCSEEEEECSSCEE-ECCCSGGGGSTTHHHHHHHHHHHTTT
T ss_pred CccCCCEEEEEcchhcC-CCCccccccCHHHHHHHHHHHHCCCc
Confidence 5 78999988654321 11123345577899999998775444
No 172
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.58 E-value=7.2e-15 Score=123.57 Aligned_cols=103 Identities=25% Similarity=0.430 Sum_probs=87.5
Q ss_pred CCCeEEEeCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-cc--cccCCCCcCc
Q 007882 432 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-NE--HHRAKSDGFP 507 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-~~--~~~~~i~~~P 507 (586)
.+.+..++.++|.+.+.. .+++++|+||++||++|+.+.|.++++++.+.+ +.++.+|++. +. +.+++|+++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC---CEEEEEecCcchHHHHHHcCCCeee
Confidence 456899999999998854 678999999999999999999999999998764 8889999873 32 4689999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++++++|+.+. ++.|.. .++|.++|++..
T Consensus 94 t~~~~~~G~~~~---~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVG---EVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEE---EEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEE---EEcCCC-HHHHHHHHHHhh
Confidence 999999998764 677865 899999998754
No 173
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.58 E-value=4.2e-15 Score=122.53 Aligned_cols=103 Identities=21% Similarity=0.448 Sum_probs=87.4
Q ss_pred CCeEEE-eCcchhHHhhc-c--CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcC
Q 007882 433 GDVKIV-VGNNFDEIVLD-E--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 433 ~~v~~l-~~~~f~~~v~~-~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
+.+..+ +.++|++.+.. . +++++|+||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|.++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~ 79 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAM 79 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBS
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCcc
Confidence 346777 45789998754 3 78999999999999999999999999999875 5888999987764 478999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
||+++|++|+.+. ++.|. +.+.|.++|++.+
T Consensus 80 Pt~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 80 PTFHVYKDGVKAD---DLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp SEEEEEETTEEEE---EEESC-CHHHHHHHHHHHH
T ss_pred cEEEEEECCeEEE---EEcCC-CHHHHHHHHHHHh
Confidence 9999999998764 67887 8999999998865
No 174
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.58 E-value=3.3e-15 Score=126.41 Aligned_cols=92 Identities=23% Similarity=0.307 Sum_probs=79.9
Q ss_pred hHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCc
Q 007882 444 DEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDP 521 (586)
Q Consensus 444 ~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~ 521 (586)
.+.+...+++++|+||++||++|+.+.|.++++++.+++ ++.++.+|++.+. +.+++|.++||+++|++|+.+.
T Consensus 35 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~-- 110 (128)
T 3ul3_B 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLA-- 110 (128)
T ss_dssp SSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEE--
T ss_pred HHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEE--
Confidence 333446789999999999999999999999999999875 6889999988765 4789999999999999888764
Q ss_pred cccccccCHHHHHHHHHhc
Q 007882 522 INVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 522 ~~~~g~~~~~~l~~~i~~~ 540 (586)
++.|..+.++|.+||+++
T Consensus 111 -~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 111 -RKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp -EESSCCCHHHHHHHHTTC
T ss_pred -EecCCCCHHHHHHHHHhC
Confidence 788999999999999764
No 175
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.58 E-value=4.8e-15 Score=122.16 Aligned_cols=102 Identities=12% Similarity=0.240 Sum_probs=82.6
Q ss_pred eEEEeC-cchhHHhh--ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 435 VKIVVG-NNFDEIVL--DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 435 v~~l~~-~~f~~~v~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
+..++. ++|++.+. ..+++++|+||++||++|+.+.|.|+++++.+.. .++.++.+|++.+. +..++|.++||+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN-SNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 567887 89999874 3478999999999999999999999999998643 25889999988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
++|++|+.+. ++.|. ..++|.++|++.+
T Consensus 81 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILK---ELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEE---EECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEE---EecCC-CHHHHHHHHHHHH
Confidence 9999998764 67786 4557999998764
No 176
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.57 E-value=3.3e-15 Score=133.59 Aligned_cols=99 Identities=13% Similarity=0.246 Sum_probs=79.5
Q ss_pred eChhhHHHHH----hCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCCCcHHH-----------
Q 007882 98 LKERNFSDVI----ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEENEL----------- 159 (586)
Q Consensus 98 l~~~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~~l----------- 159 (586)
++..+|++.+ .++++++|+|||+||+||+.+.+.+ .++.+.+++ ++.++.||+++...+
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhhcch
Confidence 3455666655 6789999999999999999974444 556666655 699999999877644
Q ss_pred ---------------HHHcCCCCCcEEEEE-eCC-eeeeecCCCC-HHHHHHHHHHhc
Q 007882 160 ---------------AHEYDVQGFPTIYFF-VDG-QHKAYNGGRT-KDAIVTWIKKKI 199 (586)
Q Consensus 160 ---------------~~~~~i~~~Pt~~~~-~~g-~~~~~~g~~~-~~~l~~~i~~~~ 199 (586)
+++|+|.++||+++| ++| ...++.|..+ .+.+.++|.+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 588 4467889998 999999998765
No 177
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.57 E-value=1.1e-14 Score=122.33 Aligned_cols=103 Identities=22% Similarity=0.388 Sum_probs=87.9
Q ss_pred CCCeEEE-eCcchhHHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCc
Q 007882 432 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDG 505 (586)
Q Consensus 432 ~~~v~~l-~~~~f~~~v~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~ 505 (586)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|+++++.+. ++.++.+|++.+. +..++|.+
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~ 91 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQA 91 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCCS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCCc
Confidence 4567777 56899988854 58899999999999999999999999999875 4999999988765 47899999
Q ss_pred CcEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 506 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 506 ~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+||+++|++|+.+. ++.| .+.+.|.++|++.+
T Consensus 92 ~Pt~~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 92 MPTFMFLKEGKILD---KVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSEEEEEETTEEEE---EEES-CCHHHHHHHHHHHC
T ss_pred cCEEEEEECCEEEE---EEeC-CCHHHHHHHHHHhc
Confidence 99999999998764 6777 58999999998764
No 178
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.57 E-value=5.5e-15 Score=121.83 Aligned_cols=102 Identities=22% Similarity=0.418 Sum_probs=88.1
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+....++.++|++.+ +.+++++|+||++||++|+.+.|.++++++.+.+ +.++.+|++.+. +..++|.++||+
T Consensus 8 ~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~---v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK---MVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CEEEEEECCCCHHHHHHcCCCcccEE
Confidence 3456788889999987 5789999999999999999999999999998753 888899988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
++|++|+.+. ++.|. +.+.|.++|++.+
T Consensus 84 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVD---TLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEE---EEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEE---EEeCC-CHHHHHHHHHHhh
Confidence 9999988764 67887 9999999998764
No 179
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.57 E-value=6.8e-15 Score=143.34 Aligned_cols=105 Identities=17% Similarity=0.314 Sum_probs=93.2
Q ss_pred CCCeEEEeCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
.+.|..++.++|++.+.. .+++++|+||++||++|+.+.|.|.++++.+++ ++.|+.+|++.+. +..|+|.++||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCe
Confidence 356899999999997743 378999999999999999999999999999876 5889999988765 47999999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. ++.|..+.+.+.+|+....
T Consensus 84 ~~~~~~G~~~~---~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 84 VYLFQNGQPVD---GFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHS
T ss_pred EEEEECCEEEE---EeeCCCCHHHHHHHHHHHc
Confidence 99999998774 7889999999999999886
No 180
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.57 E-value=6.1e-15 Score=122.60 Aligned_cols=100 Identities=19% Similarity=0.445 Sum_probs=85.8
Q ss_pred CeEEEeC-cchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 434 DVKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 434 ~v~~l~~-~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+..++. ++|.+.+.+ .+++++|+||++||++|+.+.|.++++++.+ ++.++.+|++.+. +.+++|.++||+
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3778887 899998854 6789999999999999999999999999876 4888999988765 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
++|++|+.+. ++.| .+.+.|.++|++++
T Consensus 90 ~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVG---DVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEE---EEeC-CCHHHHHHHHHHhC
Confidence 9999998764 6778 68899999998753
No 181
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.57 E-value=6.2e-15 Score=126.85 Aligned_cols=104 Identities=21% Similarity=0.351 Sum_probs=77.8
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEE
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTIL 510 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~ 510 (586)
+.+..++.++|...+...++ ++|+||++||++|+.+.|.|+++++.+.+ ++.|+.+|++.+. +..|+|.++||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 56788999999998866666 99999999999999999999999999875 5999999998765 4789999999999
Q ss_pred EEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 511 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 511 ~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+|++|+.+. ++.|..+.+.|.+||.+.+.
T Consensus 110 ~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LFRRGAPVA---TWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred EEeCCcEEE---EEeCCCCHHHHHHHHHHHHc
Confidence 999998764 78899999999999998754
No 182
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.56 E-value=1e-14 Score=153.95 Aligned_cols=114 Identities=34% Similarity=0.655 Sum_probs=98.3
Q ss_pred CCCCCCCeEEeChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCC
Q 007882 88 PEIDDKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (586)
Q Consensus 88 ~~~~~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~ 166 (586)
|......+..|++.+|+..+. .++++||+|||+||++|+.+.|.|.++++.++..+..+.++.+|++.+... . |+|.
T Consensus 353 p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~ 430 (504)
T 2b5e_A 353 FENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIE 430 (504)
T ss_dssp CCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCS
T ss_pred CccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCce
Confidence 333557799999999998874 589999999999999999999999999999873234699999999877644 4 9999
Q ss_pred CCcEEEEEeCC-e--eeeecCCCCHHHHHHHHHHhcCCCc
Q 007882 167 GFPTIYFFVDG-Q--HKAYNGGRTKDAIVTWIKKKIGPGI 203 (586)
Q Consensus 167 ~~Pt~~~~~~g-~--~~~~~g~~~~~~l~~~i~~~~~~~~ 203 (586)
++||+++|++| . ...|.|.++.+.|.+||.+.+...+
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred ecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 99999999988 4 6789999999999999999986654
No 183
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.56 E-value=2e-14 Score=125.67 Aligned_cols=96 Identities=23% Similarity=0.409 Sum_probs=79.2
Q ss_pred hhHHHHHhCCCeEEEEEE-CCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCCCcH-----------HHHHHcCC
Q 007882 101 RNFSDVIENNKFVMVEFY-APWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEEN-----------ELAHEYDV 165 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~-a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~-----------~l~~~~~i 165 (586)
+.+.....++++++|+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||++... .++++|+|
T Consensus 38 ~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v 114 (154)
T 2ju5_A 38 EALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKV 114 (154)
T ss_dssp HHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccCCChhhHhhHHHHHHHcCC
Confidence 334444456899999999 99999999999999 777666544 6999999998753 89999999
Q ss_pred CCCcEEEEE-eCC-eeeeecCCC--CHHHHHHHHHHhcC
Q 007882 166 QGFPTIYFF-VDG-QHKAYNGGR--TKDAIVTWIKKKIG 200 (586)
Q Consensus 166 ~~~Pt~~~~-~~g-~~~~~~g~~--~~~~l~~~i~~~~~ 200 (586)
.++||++++ .+| ...++ |.. +.+.+.++|.+.+.
T Consensus 115 ~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 115 TGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999999999 588 44566 888 89999999988764
No 184
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.56 E-value=6.6e-15 Score=136.13 Aligned_cols=107 Identities=21% Similarity=0.472 Sum_probs=94.6
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
...+..+++.+|...+ ..++++||+||++||++|+.+.|.|.++++.+.+ .+.++.+|++.+. +..++|.++||+
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 4568899999999988 6689999999999999999999999999999876 5899999988765 578999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
++|++|+.+. ++.|.++.+.|.+||.+++...
T Consensus 173 ~~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 173 FIFRSGMAAV---KYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp EEECTTSCCE---ECCSCCCHHHHHHHHHHHHHCC
T ss_pred EEEECCCcee---EecCCCCHHHHHHHHHHhCccc
Confidence 9998888764 7899999999999999887544
No 185
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.56 E-value=3.4e-15 Score=124.33 Aligned_cols=99 Identities=14% Similarity=0.224 Sum_probs=82.1
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------ccccCCCCcCc
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------EHHRAKSDGFP 507 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------~~~~~~i~~~P 507 (586)
.+..++.++|...+ ..+++++|+||++||++|+.+.|.|.++++.+.. .+.++.++...+ .+..++|.++|
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~i~~~P 89 (118)
T 1zma_A 13 DLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYGIPTVP 89 (118)
T ss_dssp TSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHTCCSSC
T ss_pred hhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcCCCCCC
Confidence 46778888999876 5578999999999999999999999999998763 577776654332 12578999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHH
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLK 538 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~ 538 (586)
|+++|++|+.+. ++.|..+.+.|.+||+
T Consensus 90 t~~~~~~G~~~~---~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITDGQINV---RCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEEETTEEEE---ECCTTCCHHHHHHHHT
T ss_pred eEEEEECCEEEE---EecCCCCHHHHHHHhh
Confidence 999999998764 7889999999999985
No 186
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.56 E-value=5.2e-15 Score=122.24 Aligned_cols=99 Identities=19% Similarity=0.397 Sum_probs=82.0
Q ss_pred CCeEEEeCc-chhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 433 GDVKIVVGN-NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 433 ~~v~~l~~~-~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
+.+..++.. +|++ +.+.+++++|+||++||++|+.+.|.|+++++.+.+ +.++.+|++.+. +.+++|.++||+
T Consensus 12 ~~~~~~~~~~~~~~-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~ 87 (114)
T 2oe3_A 12 TSITKLTNLTEFRN-LIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTF 87 (114)
T ss_dssp GGSCBCCSHHHHHH-HHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred hheeecCCHHHHHH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEE
Confidence 345555554 4555 446789999999999999999999999999998765 888889888764 478999999999
Q ss_pred EEEeCCCcccCccccccccCHHHHHHHHHh
Q 007882 510 LFFPAGNKSFDPINVDVDRTVVALYKFLKK 539 (586)
Q Consensus 510 ~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~ 539 (586)
++|++|+.+. ++.|.. .+.|.++|++
T Consensus 88 ~~~~~G~~~~---~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIG---KIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEE---EEESSC-HHHHHHHHHT
T ss_pred EEEeCCeEEE---EEeCCC-HHHHHHHHHh
Confidence 9999998764 788877 8999999975
No 187
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.55 E-value=1.2e-14 Score=117.91 Aligned_cols=99 Identities=19% Similarity=0.493 Sum_probs=83.7
Q ss_pred EEEeC-cchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEE
Q 007882 436 KIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILF 511 (586)
Q Consensus 436 ~~l~~-~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~ 511 (586)
+.++. ++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++.+. +..+++.++||+++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 45565 788888754 67899999999999999999999999999875 4888999988765 57899999999999
Q ss_pred EeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 512 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 512 ~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|++|+.+. ++.| .+.++|.++|++.+
T Consensus 79 ~~~g~~~~---~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVD---RFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEE---EEeC-CCHHHHHHHHHhhC
Confidence 99888764 6778 68999999998753
No 188
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=9.1e-16 Score=131.58 Aligned_cols=103 Identities=20% Similarity=0.370 Sum_probs=85.8
Q ss_pred CCeEEEeCcchhHHhhccC-CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCC-----
Q 007882 433 GDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSD----- 504 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~----- 504 (586)
+.+..++.++|++.+.... ++++|+|||+||++|+.+.|.|+++++.+.+ .++.++.+|++.+. +.+++|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC-TGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS-SSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 4688999999999885544 4899999999999999999999999999874 35899999988765 4789998
Q ss_pred -cCcEEEEEeCCCcccCccccccccCHHHHHHHHHh
Q 007882 505 -GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 539 (586)
Q Consensus 505 -~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~ 539 (586)
++||+++|++|+.+. ++.|..+.+.|.+|+.+
T Consensus 86 ~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAM---RRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SCSSEEEEESSSSEEE---EESCBCSSSCBCCCCCC
T ss_pred CCCCEEEEEECCEEEE---EecCcCchHHHHHHHhc
Confidence 999999999998764 67787776666666543
No 189
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.55 E-value=1.4e-14 Score=117.85 Aligned_cols=96 Identities=20% Similarity=0.405 Sum_probs=82.3
Q ss_pred eCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCC
Q 007882 439 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAG 515 (586)
Q Consensus 439 ~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g 515 (586)
+.++|++.+.. .+++++|+||++||++|+.+.|.++++++.+++ +.++.+|++.+. +..+++.++||+++|++|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 34678877643 578999999999999999999999999998865 888899988765 478999999999999999
Q ss_pred CcccCccccccccCHHHHHHHHHhcC
Q 007882 516 NKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 516 ~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+.+. ++.|. +.+.|.++|++++
T Consensus 84 ~~~~---~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVG---EFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEE---EEESS-CHHHHHHHHHHHC
T ss_pred eEEE---EEeCC-CHHHHHHHHHHhC
Confidence 8875 78887 9999999998753
No 190
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.55 E-value=5.8e-15 Score=121.15 Aligned_cols=100 Identities=14% Similarity=0.221 Sum_probs=82.9
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
+..++.++| +.+ ..+++++|+||++||++|+.+.|.|+++++.+. ++.++.+|++.+. +.+++|.++||+++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 345677899 555 457899999999999999999999999998764 4777888876554 478999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|+.+. ++.|..+.++|.+++....+
T Consensus 80 ~~G~~v~---~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 80 RDGKVAK---VFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp ESSSEEE---EEESCCCHHHHHHHHHTC--
T ss_pred ECCEEEE---EEcCCCCHHHHHHHHHHHhh
Confidence 9998875 78899999999999998764
No 191
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.55 E-value=3.3e-15 Score=121.04 Aligned_cols=77 Identities=22% Similarity=0.392 Sum_probs=64.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC------CcHHHHHHcCCCCCcEEEEEeCCeeeee
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------EENELAHEYDVQGFPTIYFFVDGQHKAY 182 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------~~~~l~~~~~i~~~Pt~~~~~~g~~~~~ 182 (586)
.+++++|+|||+||++|+.+.|.|.++++.++ .|||+ +++.++++|+|+++||+++ +|.. |
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~--~ 77 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--Y 77 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE--E
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE--e
Confidence 45677999999999999999999999886552 46666 5788999999999999777 8863 8
Q ss_pred cCCCCHHHHHHHHHHh
Q 007882 183 NGGRTKDAIVTWIKKK 198 (586)
Q Consensus 183 ~g~~~~~~l~~~i~~~ 198 (586)
.|..+.+.|.+|+...
T Consensus 78 ~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 78 TGVRSLEALAVASGYP 93 (106)
T ss_dssp ESCCCHHHHHHHHTCC
T ss_pred cCCCCHHHHHHHhCCc
Confidence 9999999999987543
No 192
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.54 E-value=3.5e-14 Score=124.07 Aligned_cols=108 Identities=22% Similarity=0.351 Sum_probs=89.4
Q ss_pred CCCeEEEe-CcchhHHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCc
Q 007882 432 DGDVKIVV-GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFP 507 (586)
Q Consensus 432 ~~~v~~l~-~~~f~~~v~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~P 507 (586)
.+.+..++ .++|++.+... ++++||+||++||++|+.+.|.|.++++.+. ++.|+.+|++.+. +..|+|.++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 35577777 48899877443 7899999999999999999999999999873 5889999988765 4789999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCCcc
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 546 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 546 (586)
|+++|.+|+.+. ++.| .+.++|.++|.+.+.....
T Consensus 88 t~~~~~~G~~~~---~~~G-~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 88 TFLFFKNSQKID---RLDG-AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp EEEEEETTEEEE---EEES-SCHHHHHHHHHHHSCTTSS
T ss_pred EEEEEECCEEEE---EEeC-CCHHHHHHHHHHHhccccC
Confidence 999999887764 5667 5788999999999876543
No 193
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.54 E-value=1.7e-14 Score=135.46 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=89.5
Q ss_pred CeEEeChhhHHHHHhCCCeE-EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 94 DVVVLKERNFSDVIENNKFV-MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~-lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
.+..+++++|+.++..++++ +|+||++||++|+.+.|.|.+++..+ + ++.++.||++++++++++|+|.++||++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 194 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-D---YITSKVIDASENQDLAEQFQVVGVPKIV 194 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-T---TEEEEEEEGGGCHHHHHHTTCCSSSEEE
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-C---CeEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 35678899999888665555 88999999999999999999999887 3 5999999999999999999999999999
Q ss_pred EEeCCeeeeecCCCCHHHHHHHHHHhcC
Q 007882 173 FFVDGQHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 173 ~~~~g~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+ +|+..+|.|..+.+.|.+||.+.+.
T Consensus 195 ~--~G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 195 I--NKGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp E--GGGTEEEESCCCHHHHHHHHHHHHH
T ss_pred E--CCEEEEeeCCCCHHHHHHHHHHHhh
Confidence 8 8876679999999999999988763
No 194
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.54 E-value=2.7e-14 Score=135.43 Aligned_cols=112 Identities=26% Similarity=0.436 Sum_probs=93.5
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCc--c--ccccCCCCcC
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT--N--EHHRAKSDGF 506 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~i~~~~id~~~--~--~~~~~~i~~~ 506 (586)
.+.+..++.++|++.+.+.+++++|+|||+||++|+.+.|.|+++++.+.+ ...+.++.+|++. + .+..++|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 467999999999999988789999999999999999999999999999875 2369999999843 3 3578999999
Q ss_pred cEEEEEeCCCccc--CccccccccCHHHHHHHHHhcCCCC
Q 007882 507 PTILFFPAGNKSF--DPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 507 Pt~~~~~~g~~~~--~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
||+++|.+|++.. ..+.+.| ++.+.|.++|.+++...
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhc
Confidence 9999999876542 2334555 79999999999887543
No 195
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.54 E-value=2.4e-14 Score=122.43 Aligned_cols=88 Identities=22% Similarity=0.431 Sum_probs=77.3
Q ss_pred hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------cHHHHHHcCC
Q 007882 108 ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------ENELAHEYDV 165 (586)
Q Consensus 108 ~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~l~~~~~i 165 (586)
.++++++|.||++||++|+.+.|.+.++++++. ++.++.|+++. +..+++.|++
T Consensus 22 ~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 97 (136)
T 1lu4_A 22 LQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNV 97 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTC
T ss_pred hCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCC
Confidence 367899999999999999999999999999886 48999999877 5789999999
Q ss_pred CCCcEEEEEe-CCeeeeec---CCCCHHHHHHHHHHhc
Q 007882 166 QGFPTIYFFV-DGQHKAYN---GGRTKDAIVTWIKKKI 199 (586)
Q Consensus 166 ~~~Pt~~~~~-~g~~~~~~---g~~~~~~l~~~i~~~~ 199 (586)
.++|++++++ +|+...+. |..+.+.|.++|.+.+
T Consensus 98 ~~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 98 PWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp CSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CCCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 9999999995 88444888 9999999999998764
No 196
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.53 E-value=3.4e-14 Score=122.12 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=81.1
Q ss_pred eCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCC
Q 007882 439 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAG 515 (586)
Q Consensus 439 ~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g 515 (586)
+.++|+..+.+ .+++++|.|||+||++|+.+.|.|+++++.+.+ ++.++.+|++.+. +..++|+++||+++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 45788887765 688999999999999999999999999999865 5889999988765 478999999999999998
Q ss_pred CcccC------cccccccc-CHHHHHHHHHhcC
Q 007882 516 NKSFD------PINVDVDR-TVVALYKFLKKNA 541 (586)
Q Consensus 516 ~~~~~------~~~~~g~~-~~~~l~~~i~~~~ 541 (586)
+.+.. ..++.|.. +.++|.++|++..
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 87521 01344555 4888988888754
No 197
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.53 E-value=4.3e-14 Score=120.75 Aligned_cols=102 Identities=21% Similarity=0.362 Sum_probs=82.5
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------- 155 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 155 (586)
+..++++.+......+++++|.||++||++|+.+.|.+.++++++. ++.++.|+++.
T Consensus 10 ~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 3334444444333368899999999999999999999999999885 48889998854
Q ss_pred ----cHHHHHHcCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhcC
Q 007882 156 ----ENELAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 156 ----~~~l~~~~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+..+++.|+|.++|++++++ +|....+.|..+.+.+.++|.+.+.
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 46789999999999999995 8854489999999999999988764
No 198
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.52 E-value=1.1e-13 Score=120.07 Aligned_cols=103 Identities=14% Similarity=0.313 Sum_probs=87.1
Q ss_pred EEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC---------------------
Q 007882 96 VVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--------------------- 154 (586)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--------------------- 154 (586)
..++++.+.....++++++|.||++||++|+.+.|.+.++++++.+ .+.++.|+++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD---QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC---CcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 4566777776656789999999999999999999999999999877 4888888853
Q ss_pred ------CcHHHHHHcCCCCCcEEEEE-eCC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 155 ------EENELAHEYDVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 155 ------~~~~l~~~~~i~~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
.+..+++.|+|.++|+++++ ++| ....+.|..+.+.+.++|.+.+..
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 45689999999999999999 588 456788999999999999887653
No 199
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.52 E-value=6.4e-15 Score=125.80 Aligned_cols=103 Identities=18% Similarity=0.301 Sum_probs=85.0
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC---------Ccc--cccc
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG---------TTN--EHHR 500 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~---------~~~--~~~~ 500 (586)
.+.+..++.++|++.+.. +++|+|||+||++|+.+.|.|.++++.++ +.++.+|+ +.+ .+..
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 456888999999998743 99999999999999999999999998764 55666666 222 2468
Q ss_pred CCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 501 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 501 ~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
++|.++||+++|++|+.+. ++.|..+.+.+.+++++.....
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~---~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVD---KLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCSSSEEEEEETTEEEE---EEESCCCHHHHHHHHHHHC---
T ss_pred cCCceeCeEEEEcCCEEEE---EEeCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999998875 8889999999999999887543
No 200
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.28 E-value=8.4e-16 Score=130.54 Aligned_cols=98 Identities=24% Similarity=0.382 Sum_probs=82.9
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCC--CcHHHHHHcCCCCCcEEEEE-
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT--EENELAHEYDVQGFPTIYFF- 174 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~~~Pt~~~~- 174 (586)
+.+.....+++++||+|||+||++|+.+.|.+ .++++.+++ ++.++.||++ +...++++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPEGQELARRYRVPGTPTFVFLV 86 (130)
Confidence 34455556789999999999999999999999 888887765 6899999994 55789999999999999999
Q ss_pred -eCCe---eeeecCCCCHHHHHHHHHHhcCC
Q 007882 175 -VDGQ---HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 175 -~~g~---~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
++|+ ..++.|..+.+.|.++|.+.+..
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 5674 56789999999999999887743
No 201
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.52 E-value=2e-14 Score=119.59 Aligned_cols=103 Identities=16% Similarity=0.237 Sum_probs=84.1
Q ss_pred CeEEE--eCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEE
Q 007882 434 DVKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTI 509 (586)
Q Consensus 434 ~v~~l--~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~ 509 (586)
.+..+ +..+|.+.+.+.+++++|+||++||++|+.+.|.|.++++.+ .++.++.+|++.+. +..++|.++||+
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~---~~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN---KDVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC---TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC---CCeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 46677 456888777667899999999999999999999999999988 35889999988765 478999999999
Q ss_pred EEEeC----CCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 510 LFFPA----GNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 510 ~~~~~----g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
++|++ |+.+. ++.|.. .++|.+.+.++...
T Consensus 81 ~~~~~~~~~G~~~~---~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 81 FFVKKEGNEIKTLD---QFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEETTEEEEEE---EEESCC-HHHHHHHHHHHC--
T ss_pred EEEeCCCCcceEEE---eecCCC-HHHHHHHHHHhhhc
Confidence 99987 76664 677755 45699999987654
No 202
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.52 E-value=4.2e-14 Score=125.26 Aligned_cols=105 Identities=17% Similarity=0.342 Sum_probs=84.1
Q ss_pred CeEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC--------------------
Q 007882 94 DVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-------------------- 153 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-------------------- 153 (586)
.+..++++.+.....+++++||+||++||++|+.+.|.|.+++++++..+ +.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 35555666665555578999999999999999999999999999886633 55555543
Q ss_pred --------CCcHHHHHHcCCCCCcEEEEE-eCC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 154 --------TEENELAHEYDVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 154 --------~~~~~l~~~~~i~~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+.+..++++|+|.++|+++++ ++| ....+.|..+.+.|.++|.+.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 334589999999999999999 588 45678899999999999998775
No 203
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.51 E-value=3.4e-14 Score=122.06 Aligned_cols=104 Identities=20% Similarity=0.340 Sum_probs=87.6
Q ss_pred CCCeEEEe-CcchhHHhh---ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCc
Q 007882 432 DGDVKIVV-GNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDG 505 (586)
Q Consensus 432 ~~~v~~l~-~~~f~~~v~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~ 505 (586)
.+.+..++ .++|.+.+. ..+++++|+||++||++|+.+.|.|+++++.+. ++.++.+|++.+. +..++|.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCc
Confidence 45566665 689998874 357899999999999999999999999999874 4888889888765 47899999
Q ss_pred CcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 506 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 506 ~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+||+++|++|+.+. ++.|. +.+.|.++|.+.+.
T Consensus 100 ~Pt~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 100 TPTFFFLRDGQQVD---KLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp ESEEEEEETTEEEE---EEESC-CHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCeEEE---EEeCC-CHHHHHHHHHHHhc
Confidence 99999999998764 67787 88999999998764
No 204
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.51 E-value=2.9e-14 Score=120.19 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=79.4
Q ss_pred hccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEe--CCccc--cccCCCCcCcEEEEEe-CCCcccCcc
Q 007882 448 LDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD--GTTNE--HHRAKSDGFPTILFFP-AGNKSFDPI 522 (586)
Q Consensus 448 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id--~~~~~--~~~~~i~~~Pt~~~~~-~g~~~~~~~ 522 (586)
...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+| ++.+. +..++|.++||+++|. +|+.+.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~--- 97 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY--- 97 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE---
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE---
Confidence 35678999999999999999999999999999863 58888888 76554 4789999999999998 787764
Q ss_pred ccccccCHHHHHHHHHhcCCCC
Q 007882 523 NVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 523 ~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
++.|..+.+.|.++|++++...
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCC
T ss_pred EecCCCCHHHHHHHHHHHhccc
Confidence 7889999999999999987655
No 205
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.51 E-value=3.3e-14 Score=125.02 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=70.1
Q ss_pred eChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcC---CCCCcEEEE
Q 007882 98 LKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYD---VQGFPTIYF 173 (586)
Q Consensus 98 l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~---i~~~Pt~~~ 173 (586)
+++..+..+-. ++++++|+|||+||+||+.+.|.|.++++.+. ++.|+.||.+++++++.+|. +.++||+++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~ 116 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAEDDLRQRLALERIAIPLVLV 116 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEE
Confidence 44555554432 57899999999999999999999999998763 49999999999999999887 999999999
Q ss_pred EeCC-eeeeecCCCCH
Q 007882 174 FVDG-QHKAYNGGRTK 188 (586)
Q Consensus 174 ~~~g-~~~~~~g~~~~ 188 (586)
+++| ......|....
T Consensus 117 ~~~~G~~~~~~g~~p~ 132 (167)
T 1z6n_A 117 LDEEFNLLGRFVERPQ 132 (167)
T ss_dssp ECTTCCEEEEEESSCH
T ss_pred ECCCCCEEEEEcCCCH
Confidence 9864 65544466554
No 206
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.50 E-value=2.2e-14 Score=119.89 Aligned_cols=104 Identities=22% Similarity=0.490 Sum_probs=87.5
Q ss_pred CCCeEEEeC-cchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcE
Q 007882 432 DGDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPT 508 (586)
Q Consensus 432 ~~~v~~l~~-~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt 508 (586)
...+..++. ++|++.+ ..+++++|+||++||++|+.+.|.|+++++.+.+. ++.++.+|++.+. +..++|.++||
T Consensus 14 ~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccE
Confidence 345666666 7899877 77889999999999999999999999999877642 3888999988765 47899999999
Q ss_pred EEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 509 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 509 ~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++|++|+.+. ++.|. +.++|.+||++.+
T Consensus 92 ~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFKNGQKID---TVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEETTEEEE---EEESS-CHHHHHHHHHHHT
T ss_pred EEEEECCeEEe---eEcCC-CHHHHHHHHHHhh
Confidence 99999998764 67787 9999999998764
No 207
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.50 E-value=1.3e-14 Score=124.23 Aligned_cols=104 Identities=14% Similarity=0.143 Sum_probs=74.8
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCCcEE--EEEEeCCccc--cccCCCCcCc
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDSIV--IAKMDGTTNE--HHRAKSDGFP 507 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~--C~~C~~~~~~~~~~~~~~~~~~~i~--~~~id~~~~~--~~~~~i~~~P 507 (586)
.+..++.++|++.+. .++.++|+||++| |++|+.+.|.|+++++.+ + ++. ++.+|++.+. +.+|+|+++|
T Consensus 18 ~~~~l~~~~f~~~i~-~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHH-hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 467889999999874 4556888999887 999999999999999998 4 466 8888887654 4789999999
Q ss_pred EEEEEeCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 508 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 508 t~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
|+++|++|+.+. ++.|.++.+.|.++|++.+..+
T Consensus 94 T~~~fk~G~~v~---~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 94 ATLVFTDGKLRG---ALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp EEEEESCC-------CEESCCCHHHHHHHHHHHHC--
T ss_pred eEEEEeCCEEEE---EEeCCCCHHHHHHHHHHHhccc
Confidence 999999998875 7889999999999999987644
No 208
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.50 E-value=8.1e-15 Score=129.51 Aligned_cols=96 Identities=21% Similarity=0.370 Sum_probs=78.6
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH-HHHHcCC--CCCcEEEEE-eC
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-LAHEYDV--QGFPTIYFF-VD 176 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~i--~~~Pt~~~~-~~ 176 (586)
+.++....+++++||+|||+||++|+.+.|.|.++++.... ++.|+.||++.+.. ++..+++ .++||+++| .+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~---~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL---SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH---HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc---CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 56777778899999999999999999999999998776554 46677788877766 7888888 669999999 58
Q ss_pred Cee-eeecCC----------CCHHHHHHHHHHhc
Q 007882 177 GQH-KAYNGG----------RTKDAIVTWIKKKI 199 (586)
Q Consensus 177 g~~-~~~~g~----------~~~~~l~~~i~~~~ 199 (586)
|+. .++.|. .+.+.|.++|++.+
T Consensus 114 G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 114 GKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp SCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 844 467774 77889999888765
No 209
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.50 E-value=4.4e-14 Score=117.54 Aligned_cols=103 Identities=22% Similarity=0.393 Sum_probs=86.7
Q ss_pred CCeEEE-eCcchhHHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcC
Q 007882 433 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 433 ~~v~~l-~~~~f~~~v~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|+++++.+. ++.++.+|++.+. +..+++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 456666 46789988754 47899999999999999999999999999876 4888889888764 478999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
||+++|++|+.+. ++.| .+.+.|.++|.+.+.
T Consensus 83 Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 PTFLFIKDGEKVD---SVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp SEEEEEETTEEEE---EEES-CCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEE---EecC-CCHHHHHHHHHHHhc
Confidence 9999999998764 6677 588999999998764
No 210
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.50 E-value=1.2e-13 Score=120.55 Aligned_cols=92 Identities=16% Similarity=0.292 Sum_probs=79.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC------------------------cHHHHHHcC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------------ENELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------------~~~l~~~~~ 164 (586)
+|+++||+||++||++|+.+.|.|.++++++++ .++.++.|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK--GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhC
Confidence 689999999999999999999999999999855 369999999863 345778898
Q ss_pred --CCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 165 --VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 165 --i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
+.++|++++++ +| ....+.|..+.+.|.++|++.....
T Consensus 101 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 101 NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 99999999995 78 5678999999999999999887554
No 211
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.50 E-value=3.4e-14 Score=117.24 Aligned_cols=102 Identities=21% Similarity=0.374 Sum_probs=85.9
Q ss_pred CCeEEE-eCcchhHHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcC
Q 007882 433 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGF 506 (586)
Q Consensus 433 ~~v~~l-~~~~f~~~v~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~ 506 (586)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.++++++.+. ++.++.+|++.+. +..+++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 456677 56899998854 47899999999999999999999999999875 4999999988765 478999999
Q ss_pred cEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 507 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 507 Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
||+++|++|+.+. ++.| .+.+.|.++|++.+
T Consensus 81 Pt~~~~~~G~~~~---~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 81 PTFIFLKDGKLVD---KTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TEEEEEETTEEEE---EEEC-CCTTHHHHHHHHHH
T ss_pred cEEEEEeCCEEEE---EEec-CCHHHHHHHHHHhh
Confidence 9999999988764 5667 67889999998764
No 212
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.49 E-value=1.9e-13 Score=121.11 Aligned_cols=103 Identities=21% Similarity=0.451 Sum_probs=84.2
Q ss_pred EeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHc-------------
Q 007882 97 VLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEY------------- 163 (586)
Q Consensus 97 ~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~------------- 163 (586)
.++++.+...-.+++++||.||++||++|+.+.|.|.++++++++ .++.++.|+++.....++++
T Consensus 21 ~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 98 (165)
T 3or5_A 21 TVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS--RGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMA 98 (165)
T ss_dssp CTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TTEEEEEEECSCCHHHHHHHHHHHTCCSCEEEC
T ss_pred CCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceEec
Confidence 333443333333689999999999999999999999999999986 35999999999877666666
Q ss_pred --------------CCCCCcEEEEEe-CCe-eeeecCCCCHHHHHHHHHHhcCC
Q 007882 164 --------------DVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 164 --------------~i~~~Pt~~~~~-~g~-~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
++.++|++++++ +|+ ...+.|..+.+.+.++|.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 99 TPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred CHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 899999999995 884 46788999999999999998754
No 213
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.49 E-value=3.9e-14 Score=114.69 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=70.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc--HHHHHHcCCCCCcEEEEEeCC-eeeeecCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE--NELAHEYDVQGFPTIYFFVDG-QHKAYNGG 185 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~i~~~Pt~~~~~~g-~~~~~~g~ 185 (586)
+...+||+|||+||++|+.+.+.+....+.... ...+.+..||.+.+ ..++.+++|.++||+++|++| .+.+..|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 457899999999999999998755433222110 11267788888775 578899999999999999999 55789999
Q ss_pred CCHHHHHHHHHHhc
Q 007882 186 RTKDAIVTWIKKKI 199 (586)
Q Consensus 186 ~~~~~l~~~i~~~~ 199 (586)
...+.+..|+.+.+
T Consensus 96 ~~~~~f~~~L~~~l 109 (116)
T 3dml_A 96 PGEDFFWPMLARLI 109 (116)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998765
No 214
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.48 E-value=2.8e-13 Score=119.36 Aligned_cols=101 Identities=16% Similarity=0.249 Sum_probs=81.6
Q ss_pred ChhhHHHHHhCCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCceEEEEEeCC-----------------------
Q 007882 99 KERNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDAT----------------------- 154 (586)
Q Consensus 99 ~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~----------------------- 154 (586)
+++.+...-.+|+++||+||++||++|+.+ +|.|.++++++++. ++.++.|+++
T Consensus 19 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (160)
T 3lor_A 19 NHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKF 96 (160)
T ss_dssp SSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred CCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHHHHHHHHHHcCCCC
Confidence 333333322368999999999999999995 99999999999763 5899998862
Q ss_pred -----CcHH------HHHHcCCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 155 -----EENE------LAHEYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 155 -----~~~~------l~~~~~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
.... +++.|+|.++|++++++ +| ....+.|..+.+.+.++|.+.+..
T Consensus 97 ~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 97 PVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred cEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 2223 89999999999999996 88 556888999999999999988754
No 215
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.48 E-value=1.9e-13 Score=119.20 Aligned_cols=92 Identities=25% Similarity=0.461 Sum_probs=79.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------HHHHHHcCCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------NELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------~~l~~~~~i~ 166 (586)
.++++||+||++||++|+.+.|.|.++++++.+ .++.++.|+++.. ..+++.|+|.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 102 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS--QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS 102 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC
Confidence 578999999999999999999999999999876 3588888888653 4789999999
Q ss_pred CCcEEEEE-eCC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 167 GFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 167 ~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
++|+++++ .+| ....+.|..+.+.|.++|.+.+...
T Consensus 103 ~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 103 PLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp SSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 99999999 488 4567889999999999999988654
No 216
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.48 E-value=1.1e-13 Score=129.28 Aligned_cols=104 Identities=21% Similarity=0.337 Sum_probs=89.7
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEe--CCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCc-----c--ccccC
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIY--APWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT-----N--EHHRA 501 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~--~~~C~~C~~~~~~~~~~~~~~~~-~~~i~~~~id~~~-----~--~~~~~ 501 (586)
.+.+..++..+|++.+ +.++++||.|| ||||+ +.|.|+++++.+.+ ..++.|+.||++. + .+.+|
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 4568899999999955 67889999999 99999 99999999999865 4579999999876 3 35789
Q ss_pred CCC--cCcEEEEEeCCCcccCcccc--ccccCHHHHHHHHHhcCC
Q 007882 502 KSD--GFPTILFFPAGNKSFDPINV--DVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 502 ~i~--~~Pt~~~~~~g~~~~~~~~~--~g~~~~~~l~~~i~~~~~ 542 (586)
+|+ ++||+++|+ |+.. .+..| .|.++.+.|.+||.++++
T Consensus 90 ~V~~~~~PTl~~F~-G~~~-~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNAD-EYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TCCTTSCCEEEEES-SSSS-SEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCCcCCCCeEEEEe-CCcC-cceeecccCCCCHHHHHHHHHHhhc
Confidence 999 999999999 8732 35578 899999999999999987
No 217
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.48 E-value=1.3e-13 Score=104.87 Aligned_cols=74 Identities=24% Similarity=0.424 Sum_probs=64.9
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCC-CHHHH
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGR-TKDAI 191 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~-~~~~l 191 (586)
..|.||++||++|+.+.|.+.++++.+.. ++.++.|| +.+++++|+|.++||+++ +|+.... |.. +.+.|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM-GRVASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHHHH
Confidence 36899999999999999999999998865 69999998 788999999999999998 8866544 887 88888
Q ss_pred HHHH
Q 007882 192 VTWI 195 (586)
Q Consensus 192 ~~~i 195 (586)
.+++
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8775
No 218
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.21 E-value=3.2e-15 Score=121.77 Aligned_cols=101 Identities=30% Similarity=0.528 Sum_probs=87.0
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEE
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFF 512 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~ 512 (586)
+..++.++|.+.+...+++++|+||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +..+++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 567888999988777789999999999999999999999999998875 4778888877654 578999999999999
Q ss_pred eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 513 PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 513 ~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
++|+.+. ++.|..+.+.|.++|++.
T Consensus 81 ~~g~~~~---~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNGQVVD---RLVGAQPKEALKERIDKH 105 (106)
Confidence 8888764 788988999999999764
No 219
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=4e-14 Score=120.39 Aligned_cols=103 Identities=11% Similarity=0.254 Sum_probs=83.7
Q ss_pred CCCeEEEeC-cchhHHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCc
Q 007882 432 DGDVKIVVG-NNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFP 507 (586)
Q Consensus 432 ~~~v~~l~~-~~f~~~v~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~P 507 (586)
.+.+..++. ++|...+... ++++||+||++||++|+.+.|.|+++++.+ .+.++.+|++.+. +..|+|.++|
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCCC
Confidence 445677775 7888877443 579999999999999999999999988765 4889999988765 4789999999
Q ss_pred EEEEEe--CCC--cccCccccccccCHHHHHHHHHhcCC
Q 007882 508 TILFFP--AGN--KSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 508 t~~~~~--~g~--~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
|+++|. +|+ .+. ++.|. +.++|.++|.+.+.
T Consensus 95 t~~~~~~~~g~g~~~~---~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVH---TVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEEETTEEEEEE---EEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEEecCCCeEEEE---EEcCC-CHHHHHHHHHHHHH
Confidence 999996 777 443 67776 89999999998764
No 220
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.47 E-value=3.2e-13 Score=118.69 Aligned_cols=91 Identities=14% Similarity=0.284 Sum_probs=77.9
Q ss_pred CCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCceEEEEEeCC----------------------------CcH--
Q 007882 109 NNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDAT----------------------------EEN-- 157 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~----------------------------~~~-- 157 (586)
+++++||+||++||++|+.+ +|.|.++++++++ .++.++.|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE--DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDG 104 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT--TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc--CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccch
Confidence 58999999999999999997 9999999999975 35899998863 112
Q ss_pred ---HHHHHcCCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 158 ---ELAHEYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 158 ---~l~~~~~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
.+++.|+|.++|+++++. +| ....+.|..+.+.|.++|.+.+..
T Consensus 105 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 105 AMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 589999999999999995 88 456888999999999999988754
No 221
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.46 E-value=5e-12 Score=118.08 Aligned_cols=196 Identities=12% Similarity=0.177 Sum_probs=148.5
Q ss_pred CeEEe-ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEE
Q 007882 94 DVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (586)
Q Consensus 94 ~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 172 (586)
.++.| +.++++.++..+++++|-|+++|| ..+.+.|.++|+.+ + .+.|+.+. +.++|+++++.+ |+++
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l-~---~~~F~~t~---~~~v~~~~~v~~-p~i~ 78 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLE---IPAVPILHSMVQKF-P---GVSFGIST---DSEVLTHYNITG-NTIC 78 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSC---STHHHHHHHHTTTC-T---TSEEEEEC---CHHHHHHTTCCS-SEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCC---chhHHHHHHHHHhC-C---CceEEEEC---CHHHHHHcCCCC-CeEE
Confidence 34555 569999999999999999999985 56889999999988 4 48888754 678999999998 9999
Q ss_pred EEeCC--eeeeecC----CCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEe-cCCCC---cchHHHHHhc
Q 007882 173 FFVDG--QHKAYNG----GRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYL-NSLVG---SESEVLADAS 242 (586)
Q Consensus 173 ~~~~g--~~~~~~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~-~~~~~---~~~~~f~~~~ 242 (586)
+|+.+ ....|.| .++.+.|.+||.....|.+.+++. +.+.++........+.+| +.... .....|..++
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~-~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA 157 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNP-VTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAA 157 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCH-HHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHH
T ss_pred EEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCc-ccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHH
Confidence 99964 5667884 799999999999999998888754 667777766544444444 43221 1235566666
Q ss_pred -cccCceeEEecCCh-----hHHHhcCCCCCCCCCeeEEeccCCcceecc-cCCCChhHHHHHHHhc
Q 007882 243 -RLEDDVNFYQTTNP-----DVAKIFHLDSKVNRPALVMVKKETEKISYF-DGKFDKSTIADFVFSN 302 (586)
Q Consensus 243 -~~~~~~~F~~~~~~-----~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y-~g~~~~~~i~~fi~~~ 302 (586)
.+++.+.|+.+... .+++.||+... ..|++++++..+.....+ .+.++.+.|.+|+...
T Consensus 158 k~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~-~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 158 KLFQGKILFILVDSGMKENGKVISFFKLKES-QLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHTTTTCEEEEEETTSGGGHHHHHHTTCCGG-GCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHhhCCEEEEEeCCccHhHHHHHHHcCCCcc-cCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 67888999886542 47789999732 479999998665443334 4789999999999753
No 222
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.46 E-value=2.4e-13 Score=118.60 Aligned_cols=92 Identities=15% Similarity=0.434 Sum_probs=80.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH-----------------------HHHHHcCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN-----------------------ELAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~l~~~~~i 165 (586)
.+++++|+||++||++|+.+.|.+.++++++.+ .++.++.|+++... .+++.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG--KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT--SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc--CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc
Confidence 578999999999999999999999999998876 35999999988764 78899999
Q ss_pred CCCcEEEEEe-CCe-eeeecCCCCHHHHHHHHHHhcCCC
Q 007882 166 QGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 166 ~~~Pt~~~~~-~g~-~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
.++|++++++ +|+ ...+.|..+.+.|.++|.+.....
T Consensus 107 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 107 NGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp CSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 9999999997 884 456778889999999999887654
No 223
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.45 E-value=4.1e-13 Score=124.88 Aligned_cols=103 Identities=20% Similarity=0.345 Sum_probs=88.7
Q ss_pred CCeEEEeCcchhHHhhccCCcEEEEEeC--CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-----c--ccccCCC
Q 007882 433 GDVKIVVGNNFDEIVLDESKDVLLEIYA--PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----N--EHHRAKS 503 (586)
Q Consensus 433 ~~v~~l~~~~f~~~v~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-----~--~~~~~~i 503 (586)
..+..++..+|++.+ ..++++||.||| |||+ +.|.|++++..+.+..++.|+.||++. + .+.+|+|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 457889999999966 667899999999 9999 999999999999765579999999543 3 3578999
Q ss_pred C--cCcEEEEEeCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 504 D--GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 504 ~--~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+ ++||+++|++|+.. .+.+|.|.++.+.|.+||.+++
T Consensus 80 ~~~~~PTl~~f~~G~~~-~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFE-NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSS-CCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcC-cceeecCCCCHHHHHHHHHHhc
Confidence 9 99999999999821 3458999999999999999997
No 224
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.45 E-value=2.2e-13 Score=119.62 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=69.8
Q ss_pred EeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHH-H--HHHHHHhhcCCCceEEEEEeCCCcHHHHHHc--------CC
Q 007882 97 VLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPE-Y--AAAATELKSANESVVLAKVDATEENELAHEY--------DV 165 (586)
Q Consensus 97 ~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~-~--~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~--------~i 165 (586)
..+++.|+.+..+++++||.|||+||++|+.+.|. | .++++.+++ ++.++.||.++.+++.+.| ++
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~---~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE---AFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH---HCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh---cCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 34578899998899999999999999999999983 3 567777766 6999999999999999888 99
Q ss_pred CCCcEEEEEe-CCeee
Q 007882 166 QGFPTIYFFV-DGQHK 180 (586)
Q Consensus 166 ~~~Pt~~~~~-~g~~~ 180 (586)
.++||+++++ +|+++
T Consensus 103 ~g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 103 GGWPLNIIMTPGKKPF 118 (173)
T ss_dssp CCSSEEEEECTTSCEE
T ss_pred CCCcceeeECCCCCce
Confidence 9999999997 88544
No 225
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.43 E-value=5.7e-13 Score=115.11 Aligned_cols=85 Identities=25% Similarity=0.545 Sum_probs=75.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------------cHHHHHHc
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHEY 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~~ 163 (586)
++++++|.||++||++|+.+.|.|.+++++++. .++.++.|+++. +..+++.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS--DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC--SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhc
Confidence 578999999999999999999999999999874 259999998854 56899999
Q ss_pred CCCCCcEEEEE-eCC-eeeeecCCCCHHHHHHHH
Q 007882 164 DVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWI 195 (586)
Q Consensus 164 ~i~~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i 195 (586)
+|.++|+++++ ++| ....+.|..+.+.|.++|
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 99999999999 588 456889999999998886
No 226
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.43 E-value=3e-13 Score=117.35 Aligned_cols=88 Identities=18% Similarity=0.354 Sum_probs=75.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH-------------------------HHHHc
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-------------------------LAHEY 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-------------------------l~~~~ 163 (586)
.+++++|.||++||++|+.+.|.+.++++++++. ++.++.|+++.... +++.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhc
Confidence 5889999999999999999999999999999872 49999999987766 99999
Q ss_pred CCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHh
Q 007882 164 DVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 164 ~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+|.++|++++++ +| ....+.|..+.+.+.+.+.+.
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999999999994 88 456777876667776666554
No 227
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.43 E-value=4.5e-14 Score=142.80 Aligned_cols=101 Identities=16% Similarity=0.268 Sum_probs=82.9
Q ss_pred CCCeEEEeCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCC------cEEEEEEeCCccc--cccCC
Q 007882 432 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD------SIVIAKMDGTTNE--HHRAK 502 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~------~i~~~~id~~~~~--~~~~~ 502 (586)
.+.+..++.++|++.+.. .++++||+|||+||++|+.+.|.|.++++.+.... .+.|+.||++.+. +.+|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 567999999999998753 34799999999999999999999999999987432 4999999998875 47899
Q ss_pred CCcCcEEEEEeCCCcccCccccccccCHHHH
Q 007882 503 SDGFPTILFFPAGNKSFDPINVDVDRTVVAL 533 (586)
Q Consensus 503 i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l 533 (586)
|.++||+++|.+|+.. .+.+|.|.++.+.|
T Consensus 102 V~~~PTlilf~~gg~~-~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSC-RSNEECGTSSLEHV 131 (470)
T ss_dssp CCSSCEEEEEEESSCC-CTTSCCCCCCEEEE
T ss_pred CCccCeEEEEECCCce-EEEEeeCCCCHHHH
Confidence 9999999999766543 45578886655544
No 228
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.42 E-value=6e-13 Score=116.13 Aligned_cols=87 Identities=20% Similarity=0.404 Sum_probs=72.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------------cHHHHHHc
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHEY 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~~ 163 (586)
.+++++|+||++||++|+.+.|.+.++++++.+ .++.++.|+++. ...+++.|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD--KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESY 105 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT--TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc--CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHh
Confidence 588999999999999999999999999999976 359999999987 56789999
Q ss_pred CCCCCcEEEEEe-CCeee-eecCCCCHHHHHHHHHHhcC
Q 007882 164 DVQGFPTIYFFV-DGQHK-AYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 164 ~i~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 200 (586)
+|.++|++++++ +|++. .+. +.+.+.++|++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 106 CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 999999999994 88543 332 44677777777654
No 229
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.42 E-value=1.1e-13 Score=119.06 Aligned_cols=96 Identities=19% Similarity=0.175 Sum_probs=67.3
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHH--HhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEe-CC
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAAT--ELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV-DG 177 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~--~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~-~g 177 (586)
+.+..+..+++++||.|||+||++|+.+.|.+.+..+ .+.+ ..+..+.|| ++...++.++++.++||++||+ +|
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G 111 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSL 111 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTS
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCC
Confidence 4455666789999999999999999999999986432 1211 135555555 2344567889999999999998 88
Q ss_pred -eeeeecCC-------CC---HHHHHHHHHHhc
Q 007882 178 -QHKAYNGG-------RT---KDAIVTWIKKKI 199 (586)
Q Consensus 178 -~~~~~~g~-------~~---~~~l~~~i~~~~ 199 (586)
...+..|. +. .+.+.+.+++.+
T Consensus 112 ~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 112 TVRADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CEEEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 44566776 33 345555555543
No 230
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.42 E-value=5.8e-13 Score=113.83 Aligned_cols=87 Identities=31% Similarity=0.497 Sum_probs=74.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC----------------------------CCcHHHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----------------------------TEENELA 160 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------------~~~~~l~ 160 (586)
+++++||+||++||++|+.+.|.+.++++++.. ++.++.|++ +.+..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLL 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHH
Confidence 589999999999999999999999999988654 688888854 2345789
Q ss_pred HHcCCCCCcEEEEE-eCC-eeeeecCCCCHHHHHHHHHHh
Q 007882 161 HEYDVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 161 ~~~~i~~~Pt~~~~-~~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+.|++.++|+++++ ++| ....+.|..+.+.+.++|++.
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999999999999 588 456889999999999998764
No 231
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.42 E-value=5.7e-13 Score=115.59 Aligned_cols=88 Identities=19% Similarity=0.396 Sum_probs=73.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHh-hcCCCceEEEEEeCCC-------------------------cHHHHHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATEL-KSANESVVLAKVDATE-------------------------ENELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 162 (586)
+++++||.||++||++|+.+.|.+.++++++ .+ .++.++.|+++. +..+++.
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN--KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQ 109 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC--TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC--CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHh
Confidence 5899999999999999999999999999998 55 348899998876 3478999
Q ss_pred cCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhcC
Q 007882 163 YDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 163 ~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
|+|.++|+++++. +|++..... +.+.+.++|.+.+.
T Consensus 110 ~~v~~~P~~~lid~~G~i~~~~~--~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 110 YAILTLPTNILLSPTGKILARDI--QGEALTGKLKELLK 146 (148)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC--CHHHHHHHHHHHC-
T ss_pred cCCCCcCEEEEECCCCeEEEecC--CHHHHHHHHHHHHc
Confidence 9999999999995 785443332 78889999888763
No 232
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.42 E-value=4.7e-13 Score=115.30 Aligned_cols=87 Identities=17% Similarity=0.423 Sum_probs=71.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH---HHHHhhcCCCceEEEEEeCCCcHHH------------------------HH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAA---AATELKSANESVVLAKVDATEENEL------------------------AH 161 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~---~~~~~~~~~~~v~~~~vd~~~~~~l------------------------~~ 161 (586)
+++++||+||++||++|+.++|.+.+ +++.+++ .++.++.|+++..... ++
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN--GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQ 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH--TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc--CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHH
Confidence 58999999999999999999999998 8888876 3599999998865533 33
Q ss_pred HcCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhc
Q 007882 162 EYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 162 ~~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.|+|.++|++++++ +|++.. +..+.+.+.++|.+..
T Consensus 104 ~~~v~~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCCCSSSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred HcCCCCCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 79999999999995 775543 5678899999987654
No 233
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.42 E-value=9.8e-13 Score=114.87 Aligned_cols=91 Identities=19% Similarity=0.350 Sum_probs=78.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC-----------------------CCcHHHHHHcCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-----------------------TEENELAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~i 165 (586)
.+++++|.||++||++|+.+.|.+.++++++++. ++.++.|+. +.+..+++.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCC
Confidence 6899999999999999999999999999999873 477776663 345689999999
Q ss_pred CCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 166 QGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 166 ~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
.++|+++++. +| ....+.|..+.+.|.++|.+.+..
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 105 QVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp CSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred CccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 9999999994 78 456789999999999999988754
No 234
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.42 E-value=6.4e-13 Score=138.39 Aligned_cols=113 Identities=25% Similarity=0.391 Sum_probs=94.5
Q ss_pred CCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCc----cccccCCCCcC
Q 007882 432 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT----NEHHRAKSDGF 506 (586)
Q Consensus 432 ~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~i~~~~id~~~----~~~~~~~i~~~ 506 (586)
.+.|..+++++|+..+.+.+++++|+|||+||++|+.+.|.|+++++.+.+ ...+.++.+|++. ..+.+++|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 457999999999999878789999999999999999999999999999976 3469999999964 22578999999
Q ss_pred cEEEEEeCCCcccC-ccccccccCHHHHHHHHHhcCCCC
Q 007882 507 PTILFFPAGNKSFD-PINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 507 Pt~~~~~~g~~~~~-~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
||+++|.+|++... ...+.|.++.+.|.++|.+.+...
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~ 129 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESH 129 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhc
Confidence 99999986544211 125667899999999999988644
No 235
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=1.7e-12 Score=113.21 Aligned_cols=84 Identities=11% Similarity=0.181 Sum_probs=71.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH-----------------------HHHHcCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-----------------------LAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-----------------------l~~~~~i 165 (586)
.+++++|+||++||++|+.++|.|.++++++++. ++.++.|+++...+ +++.|++
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc
Confidence 5789999999999999999999999999999873 59999999887653 8889999
Q ss_pred CCCcEEEEEe-CCe-eeeecCCCCHHHHHHH
Q 007882 166 QGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTW 194 (586)
Q Consensus 166 ~~~Pt~~~~~-~g~-~~~~~g~~~~~~l~~~ 194 (586)
.++|++++++ +|+ ...+.|..+.+....-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 9999999996 884 4577888777665443
No 236
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.41 E-value=1.9e-12 Score=112.84 Aligned_cols=92 Identities=24% Similarity=0.472 Sum_probs=77.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH----------------------HHHHHcCCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----------------------ELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------------~l~~~~~i~ 166 (586)
.++++||.||++||++|+.+.|.|.++++++.+. ++.++.|+++.+. .+++.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK--GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC--CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC
Confidence 5889999999999999999999999999999873 4889999888654 678889999
Q ss_pred CCcEEEEEe-CC-eeeeecCCC--CHHHHHHHHHHhcCCC
Q 007882 167 GFPTIYFFV-DG-QHKAYNGGR--TKDAIVTWIKKKIGPG 202 (586)
Q Consensus 167 ~~Pt~~~~~-~g-~~~~~~g~~--~~~~l~~~i~~~~~~~ 202 (586)
++|+++++. +| ....+.|.. +.+.|.++|.+.+...
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 999999994 88 446777854 5589999999987654
No 237
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=2.7e-13 Score=114.87 Aligned_cols=103 Identities=20% Similarity=0.361 Sum_probs=83.7
Q ss_pred EEeCcchhHHhh---ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCc--c--ccccCCCCcC
Q 007882 437 IVVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTT--N--EHHRAKSDGF 506 (586)
Q Consensus 437 ~l~~~~f~~~v~---~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~--~--~~~~~~i~~~ 506 (586)
.++..+|.+.+. ..+++++|.||++||++|+.+.|.+ ..+++.+.. .+.++.+|++. + .+..++|.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCCC
Confidence 346778888773 3578999999999999999999999 777766544 57888899874 2 2478999999
Q ss_pred cEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 507 PTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 507 Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
||+++| ++|+.+. ++.|..+.+.|.++|++..+..
T Consensus 88 Pt~~~~d~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVY---RLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEE---EEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHHhc
Confidence 999999 6787764 7889999999999999887544
No 238
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.40 E-value=1.5e-12 Score=117.47 Aligned_cols=91 Identities=13% Similarity=0.346 Sum_probs=76.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCC----ceEEEEEeCCC-cHHHHHHc--------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANE----SVVLAKVDATE-ENELAHEY-------------------- 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~----~v~~~~vd~~~-~~~l~~~~-------------------- 163 (586)
+++++||+||++||++|+.++|.|.++++++++.+. ++.|+.|+++. ..+.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 689999999999999999999999999999987321 23999999988 56555554
Q ss_pred -----CCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 164 -----DVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 164 -----~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++.++|+++++. +| ....+.|..+.+.|.++|.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 689999988885 78 4567889999999999998875
No 239
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.40 E-value=2.3e-12 Score=113.19 Aligned_cols=91 Identities=21% Similarity=0.511 Sum_probs=75.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------cHHHHHHcCCCCCc
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------ENELAHEYDVQGFP 169 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------~~~l~~~~~i~~~P 169 (586)
++++++|.||++||++|+.+.|.|.++++++.+ .++.++.|+++. ...+++.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK--GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST--TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc--CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 688999999999999999999999999999975 369999999987 57899999999999
Q ss_pred EEEEEe-CC-eeeeecCCC--CHHHHHHHHHHhcCC
Q 007882 170 TIYFFV-DG-QHKAYNGGR--TKDAIVTWIKKKIGP 201 (586)
Q Consensus 170 t~~~~~-~g-~~~~~~g~~--~~~~l~~~i~~~~~~ 201 (586)
+++++. +| ....+.|.. +...+.+.+.+...+
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 999995 88 456788864 457777777766543
No 240
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.40 E-value=8.4e-13 Score=115.45 Aligned_cols=87 Identities=22% Similarity=0.380 Sum_probs=77.1
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC---------------------------CCcHHHHHHc
Q 007882 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA---------------------------TEENELAHEY 163 (586)
Q Consensus 111 ~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~---------------------------~~~~~l~~~~ 163 (586)
++++|.||++||++|+.+.|.|.++++++ + +.++.|++ +....+++.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~----v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G----VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C----CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C----CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHh
Confidence 89999999999999999999999999998 3 77888888 3567889999
Q ss_pred CCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCCC
Q 007882 164 DVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 164 ~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~~ 202 (586)
+|.++|+++++. +| ....+.|..+.+.|.++|++.....
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 999999999995 88 4568899999999999999988654
No 241
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.39 E-value=9.8e-13 Score=113.30 Aligned_cols=83 Identities=14% Similarity=0.287 Sum_probs=68.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH---HHHHhhcCCCceEEEEEeCCCcHH------------------------HHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAA---AATELKSANESVVLAKVDATEENE------------------------LAH 161 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~---~~~~~~~~~~~v~~~~vd~~~~~~------------------------l~~ 161 (586)
.++++||+|||+||++|+.++|.+.+ +++++++ .++.++.|+.+...+ +++
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~--~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA--KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKN 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT--TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc--CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhh
Confidence 47999999999999999999999999 9999876 369999999887643 467
Q ss_pred HcCCCCCcEEEEEe-CCeee-eecCCCCHHHHHHHHH
Q 007882 162 EYDVQGFPTIYFFV-DGQHK-AYNGGRTKDAIVTWIK 196 (586)
Q Consensus 162 ~~~i~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~ 196 (586)
.|+|.++|++++++ +|++. +.. ..+.|.++|+
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLA 141 (142)
T ss_dssp CSCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHH
T ss_pred hcCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHh
Confidence 88999999999996 77443 333 4678888775
No 242
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.39 E-value=9e-14 Score=112.55 Aligned_cols=89 Identities=10% Similarity=0.057 Sum_probs=65.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc----cccCCCCcCcEEEEEeCCCcccCccccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----HHRAKSDGFPTILFFPAGNKSFDPINVD 525 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~----~~~~~i~~~Pt~~~~~~g~~~~~~~~~~ 525 (586)
+...+||+|||+||++|+.+.+.+............+.+..+|++.+. +..++|.++||+++|.+|+++. ++.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~---Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG---RLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE---EEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe---eec
Confidence 346899999999999999998654433221100012445666666542 4578999999999999999986 889
Q ss_pred cccCHHHHHHHHHhcC
Q 007882 526 VDRTVVALYKFLKKNA 541 (586)
Q Consensus 526 g~~~~~~l~~~i~~~~ 541 (586)
|....+.+.+||++.+
T Consensus 94 G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 94 GYPGEDFFWPMLARLI 109 (116)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999999998754
No 243
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.39 E-value=4.7e-13 Score=113.95 Aligned_cols=100 Identities=25% Similarity=0.477 Sum_probs=79.7
Q ss_pred eCcchhHHhhc-cCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCccc------cccCCCCcCcE
Q 007882 439 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE------HHRAKSDGFPT 508 (586)
Q Consensus 439 ~~~~f~~~v~~-~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~~------~~~~~i~~~Pt 508 (586)
+.++|...+.+ .++++||+||++||++|+.+.|.+ .++++.+.+ +.++.+|++.+. +..|+|.++||
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~---~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt 94 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD---TVLLQANVTANDAQDVALLKHLNVLGLPT 94 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT---SEEEEEECTTCCHHHHHHHHHTTCCSSSE
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---cEEEEEeCCCCcchHHHHHHHcCCCCCCE
Confidence 34567766643 378999999999999999999999 899988764 888899885421 36799999999
Q ss_pred EEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 509 ILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 509 ~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+++| ++|+.+ ...++.|..+.++|.++|++...
T Consensus 95 ~~~~d~~G~~v-~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 95 ILFFDGQGQEH-PQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEEECTTSCBC-GGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEEECCCCCEe-eeeeeeeccCHHHHHHHHHhcCc
Confidence 9999 778775 12378899999999999987654
No 244
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.39 E-value=1.5e-12 Score=115.33 Aligned_cols=87 Identities=17% Similarity=0.331 Sum_probs=74.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC------------------CcH-------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------------------EEN------------- 157 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------------------~~~------------- 157 (586)
+++++||+||++||++|+.+.|.|.+++++++ ++.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP 111 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999886 4999999987 342
Q ss_pred ---------HHHHHcCCCCCcEEEEEe-CCeeeeecCCC-CHHHHHHHHHHhcC
Q 007882 158 ---------ELAHEYDVQGFPTIYFFV-DGQHKAYNGGR-TKDAIVTWIKKKIG 200 (586)
Q Consensus 158 ---------~l~~~~~i~~~Pt~~~~~-~g~~~~~~g~~-~~~~l~~~i~~~~~ 200 (586)
.+++.|+|.++|++++++ +|++.. .|.. +.+.|.++|.+.++
T Consensus 112 ~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 112 SWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp TSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC--
T ss_pred CeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHhc
Confidence 788999999999999995 776555 8888 89999999987653
No 245
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.38 E-value=6.7e-13 Score=111.14 Aligned_cols=99 Identities=18% Similarity=0.290 Sum_probs=79.7
Q ss_pred eEEEeCcchhHHhhc-cCCcEEEEEeCC-------CChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC-------Cccc--
Q 007882 435 VKIVVGNNFDEIVLD-ESKDVLLEIYAP-------WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG-------TTNE-- 497 (586)
Q Consensus 435 v~~l~~~~f~~~v~~-~~~~~~v~f~~~-------~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~-------~~~~-- 497 (586)
+...+.++|.+.+.. .+++++|+||++ ||++|+.+.|.|.++++.+.+ ++.|+.+|+ +.+.
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 556777899998865 578999999999 999999999999999998765 689999998 3333
Q ss_pred cccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHh
Q 007882 498 HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 539 (586)
Q Consensus 498 ~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~ 539 (586)
...++|.++||+++|.++.... .+.| .+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~---g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLV---ESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEE---GGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceEe---cccc-CCHHHHHHHHhc
Confidence 3579999999999998755442 3333 578889999864
No 246
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.37 E-value=1e-12 Score=104.89 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=68.8
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHH
Q 007882 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAI 191 (586)
Q Consensus 112 ~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l 191 (586)
..++.||++||++|+.+.|.|.++++++ ++.+..||+++++++..+|+++ +|+++++.+|+.. ..|..+.+.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~-----~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~~L 102 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS-----WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSDVI 102 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS-----CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc-----CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHHHH
Confidence 5699999999999999999999998875 3888999999999999999997 9999999999665 4588899999
Q ss_pred HHHH
Q 007882 192 VTWI 195 (586)
Q Consensus 192 ~~~i 195 (586)
.+||
T Consensus 103 ~~~L 106 (107)
T 2fgx_A 103 GAYL 106 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9887
No 247
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.37 E-value=8.6e-14 Score=117.99 Aligned_cols=105 Identities=24% Similarity=0.420 Sum_probs=86.9
Q ss_pred CCCeEEE-eCcchhHHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCc
Q 007882 432 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDG 505 (586)
Q Consensus 432 ~~~v~~l-~~~~f~~~v~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~ 505 (586)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|.++++.+. ++.++.+|++.+. +..++|.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 3456666 45889988854 47899999999999999999999999999875 4788888887654 47899999
Q ss_pred CcEEEEEeCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 506 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 506 ~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
+||+++|++|+.+. ++.| .+.+.|.++|++.+..
T Consensus 90 ~Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 MPTFLFIKDGAEAD---KVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp SCCCCBCTTTTCCB---CCCT-TCTTTHHHHHHHHTSS
T ss_pred cceEEEEeCCeEEE---EEeC-CCHHHHHHHHHHHHhc
Confidence 99999998888764 6677 5778999999988764
No 248
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.37 E-value=6.4e-13 Score=118.61 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=77.4
Q ss_pred EEeCcchhHHhh---ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCccc-------------
Q 007882 437 IVVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE------------- 497 (586)
Q Consensus 437 ~l~~~~f~~~v~---~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~~------------- 497 (586)
..+..+|++.+. ..+++++|.|||+||++|+.+.+.+ .++.+.+.. ++.++.+|++.+.
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcch
Confidence 345667877663 4689999999999999999985444 555555443 5888999887654
Q ss_pred ---------------cccCCCCcCcEEEEE-eCCCcccCccccccccC-HHHHHHHHHhcC
Q 007882 498 ---------------HHRAKSDGFPTILFF-PAGNKSFDPINVDVDRT-VVALYKFLKKNA 541 (586)
Q Consensus 498 ---------------~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~-~~~l~~~i~~~~ 541 (586)
...|++.++||++++ ++|+.+. ++.|..+ .+.+.++|++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~---~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLN---KSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSS---CCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEe---eccCCCCCHHHHHHHHHHHH
Confidence 456899999999999 7788775 6678888 999999998764
No 249
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.36 E-value=1.6e-12 Score=115.55 Aligned_cols=86 Identities=17% Similarity=0.309 Sum_probs=71.2
Q ss_pred hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC-----------------------CCcHHHHHHcC
Q 007882 108 ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-----------------------TEENELAHEYD 164 (586)
Q Consensus 108 ~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~ 164 (586)
.+++++||+||++||++|+.+.|.|.+++++ ++.++.|++ +.+..+++.|+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC
Confidence 4689999999999999999999999998865 366666663 44567899999
Q ss_pred CCCCcEEEEEe-CCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 165 VQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 165 i~~~Pt~~~~~-~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
|.++|+++++. +|+ ...+.|..+.+.+.++|.+.+
T Consensus 123 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 123 VYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp CCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred ccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 99999888885 884 467889999999998887765
No 250
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=4.9e-12 Score=110.03 Aligned_cols=87 Identities=17% Similarity=0.333 Sum_probs=72.2
Q ss_pred CCCeEEEEEECCCChh--hhhhhHHHHHHHHHh-hcCCCceEEEEEeCCCcH-------------------------HHH
Q 007882 109 NNKFVMVEFYAPWCGH--CQALAPEYAAAATEL-KSANESVVLAKVDATEEN-------------------------ELA 160 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~--C~~~~p~~~~~~~~~-~~~~~~v~~~~vd~~~~~-------------------------~l~ 160 (586)
++++++|+||++||++ |+.++|.|.++++++ ++ .++.++.|+++..+ .++
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 109 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN--KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA 109 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC--SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC--CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH
Confidence 5899999999999999 999999999999999 55 35899999888654 788
Q ss_pred HHcCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhc
Q 007882 161 HEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 161 ~~~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+.|+|.++|++++++ +|++.... .+.+.+.+.|.+.+
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 110 KQYSIYKIPANILLSSDGKILAKN--LRGEELKKKIENIV 147 (150)
T ss_dssp HHTTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHH
T ss_pred HHcCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHH
Confidence 999999999999995 78544322 27788888877654
No 251
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.36 E-value=3.4e-12 Score=111.51 Aligned_cols=91 Identities=18% Similarity=0.458 Sum_probs=75.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----------------------HHHHHHcCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~l~~~~~i 165 (586)
.++++||.||++||++|+.+.|.+.++++++.+ .++.++.|+++.+ ..+++.|++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG--KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT 104 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC
Confidence 679999999999999999999999999999876 3588888888765 348889999
Q ss_pred CCCcEEEEEe-CCe-eeeecCCC--CHHHHHHHHHHhcCC
Q 007882 166 QGFPTIYFFV-DGQ-HKAYNGGR--TKDAIVTWIKKKIGP 201 (586)
Q Consensus 166 ~~~Pt~~~~~-~g~-~~~~~g~~--~~~~l~~~i~~~~~~ 201 (586)
.++|+++++. +|+ ...+.|.. +.+.+.++|.+....
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 105 TGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp CSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred CCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 9999988885 784 45778875 667999999876543
No 252
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.36 E-value=1.2e-12 Score=101.01 Aligned_cols=74 Identities=14% Similarity=0.213 Sum_probs=63.8
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHH
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVT 193 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~ 193 (586)
++.||++||++|+.+.|.|.+++..+ +..||++++++++.+|+++ +||+++ .+|+... |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHHHHHH
Confidence 78899999999999999998765332 5789999999999999998 999998 8886553 8899999999
Q ss_pred HHHHhc
Q 007882 194 WIKKKI 199 (586)
Q Consensus 194 ~i~~~~ 199 (586)
+|.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997655
No 253
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.35 E-value=6.3e-13 Score=105.81 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=76.5
Q ss_pred CCeEEEe-CcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------ccccCCCC-
Q 007882 433 GDVKIVV-GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------EHHRAKSD- 504 (586)
Q Consensus 433 ~~v~~l~-~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------~~~~~~i~- 504 (586)
+....|+ .++|++.+ +.+++++|+|+|+|||+|+.+.|.|++++.. . ++.++.+|.+.+ .+.+++|+
T Consensus 6 ~~~~~i~s~e~f~~ii-~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~---~v~~~~vdVde~r~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVI-EENKYVFVLKHSETCPISANAYDQFNKFLYE-R---DMDGYYLIVQQERDLSDYIAKKTNVKH 80 (112)
T ss_dssp GCEEECCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H---TCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred cceeecCCHHHHHHHH-hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C---CceEEEEEeecCchhhHHHHHHhCCcc
Confidence 4556664 45788876 4589999999999999999999999999984 2 466666666665 35789999
Q ss_pred cCcEEEEEeCCCcccCccccccccCHHHHHHHH
Q 007882 505 GFPTILFFPAGNKSFDPINVDVDRTVVALYKFL 537 (586)
Q Consensus 505 ~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i 537 (586)
..|++++|++|+.+.+ .-.+..+...|.+.+
T Consensus 81 ~sPq~il~k~G~~v~~--~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMVWN--RDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEEEE--EEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEEEEE--eeccccCHHHHHHhh
Confidence 5999999999998752 234677888887654
No 254
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.35 E-value=2.2e-12 Score=111.41 Aligned_cols=87 Identities=18% Similarity=0.235 Sum_probs=67.4
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc------------------
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------ 156 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 156 (586)
+..++++.+...-.+++++||+||++||++|+.++|.|.++++++++. .++.++.|+++..
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 333444433332236889999999999999999999999999998742 2688888888763
Q ss_pred ------HHHHHHcCCCCCcEEEEEe--CCeeeee
Q 007882 157 ------NELAHEYDVQGFPTIYFFV--DGQHKAY 182 (586)
Q Consensus 157 ------~~l~~~~~i~~~Pt~~~~~--~g~~~~~ 182 (586)
..+++.|+|.++|++++++ +|++...
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEEec
Confidence 4789999999999999996 7865443
No 255
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.34 E-value=3.2e-12 Score=114.38 Aligned_cols=86 Identities=20% Similarity=0.372 Sum_probs=71.8
Q ss_pred hCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-----------------------CcHHHHHHcC
Q 007882 108 ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------EENELAHEYD 164 (586)
Q Consensus 108 ~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------~~~~l~~~~~ 164 (586)
..++++||+||++||++|+.+.|.|.+++++ ++.++.|+++ .+..+++.|+
T Consensus 56 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (176)
T 3kh7_A 56 LKGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG 129 (176)
T ss_dssp GCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC
Confidence 3589999999999999999999999998875 3777777742 3457888999
Q ss_pred CCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 165 VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 165 i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
|.++|+++++. +| ....+.|..+.+.+.++|.+.+
T Consensus 130 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 130 VYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp CCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999995 78 4568889999999988887765
No 256
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.34 E-value=3.1e-12 Score=113.11 Aligned_cols=73 Identities=23% Similarity=0.458 Sum_probs=62.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc------------------------HHHHHHcC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 164 (586)
+++++||+||++||++|+.++|.|.++++++++. .++.++.|+++.. ..+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 5899999999999999999999999999999752 2688888888766 57899999
Q ss_pred CCCCcEEEEEe-C-Ceeeee
Q 007882 165 VQGFPTIYFFV-D-GQHKAY 182 (586)
Q Consensus 165 i~~~Pt~~~~~-~-g~~~~~ 182 (586)
|.++|++++++ + |+++..
T Consensus 126 v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 126 VESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp CCSSSEEEEEETTTCCEEES
T ss_pred CCCCCEEEEEeCCCCEEEec
Confidence 99999999997 5 865543
No 257
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.34 E-value=1e-12 Score=111.72 Aligned_cols=87 Identities=22% Similarity=0.424 Sum_probs=72.9
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHHH--HHHHHhcCCCcEEEEEEeC---Cccc--cccCCC---CcCcEEEEE-eCCCc
Q 007882 449 DESKDVLLEIYAPWCGHCQAFEPTYN--KLAKHLRGVDSIVIAKMDG---TTNE--HHRAKS---DGFPTILFF-PAGNK 517 (586)
Q Consensus 449 ~~~~~~~v~f~~~~C~~C~~~~~~~~--~~~~~~~~~~~i~~~~id~---~~~~--~~~~~i---~~~Pt~~~~-~~g~~ 517 (586)
..+++++|+||++||++|+.+.|.|. +++..+.+ ++.++.+|+ +.+. +..|+| .++||+++| ++|+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 46899999999999999999999999 99988864 588888888 4433 478999 999999999 78887
Q ss_pred ccCcccccc-------ccCHHHHHHHHHhc
Q 007882 518 SFDPINVDV-------DRTVVALYKFLKKN 540 (586)
Q Consensus 518 ~~~~~~~~g-------~~~~~~l~~~i~~~ 540 (586)
+. ++.| ..+.+.|.+||++.
T Consensus 105 ~~---~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 105 RY---TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EE---ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EE---EecCCcccccccCCHHHHHHHHHHh
Confidence 64 5556 57899999999764
No 258
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.34 E-value=2e-12 Score=100.34 Aligned_cols=81 Identities=21% Similarity=0.267 Sum_probs=68.7
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccC
Q 007882 452 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRT 529 (586)
Q Consensus 452 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~ 529 (586)
..++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+. +.++++.++||+++ +|+. ++.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-----EFIGAPT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-----ECCSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-----eeecCCC
Confidence 4689999999999999999999999999874 5888888887654 57899999999998 6543 5788889
Q ss_pred HHHHHHHHHhcC
Q 007882 530 VVALYKFLKKNA 541 (586)
Q Consensus 530 ~~~l~~~i~~~~ 541 (586)
.++|.++|++++
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 259
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.33 E-value=2.2e-12 Score=112.97 Aligned_cols=86 Identities=20% Similarity=0.403 Sum_probs=71.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHcCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~i 165 (586)
.+++++|+||++||++|+.+.|.|.+++++ + ++.++.|++++ ...+++.|+|
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~---~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 115 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K---RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV 115 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T---TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C---CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc
Confidence 478999999999999999999999998765 2 57788877643 4478889999
Q ss_pred CCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 166 QGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 166 ~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.++|+++++. +| ....+.|..+.+.+.++|.+.+
T Consensus 116 ~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 116 YGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp CSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred CccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9999888884 88 4467889999999998887765
No 260
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.33 E-value=3.4e-12 Score=110.43 Aligned_cols=72 Identities=19% Similarity=0.400 Sum_probs=61.7
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc------------------------HHHHHHcC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 164 (586)
++++++|+||++||++|+.+.|.|.++++++++. .++.++.|+++.. ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 5889999999999999999999999999999732 2688888888753 47899999
Q ss_pred CCCCcEEEEEe--CCeeee
Q 007882 165 VQGFPTIYFFV--DGQHKA 181 (586)
Q Consensus 165 i~~~Pt~~~~~--~g~~~~ 181 (586)
|.++||+++++ +|++..
T Consensus 106 v~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 106 VESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCeEEE
Confidence 99999999997 785543
No 261
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.33 E-value=2.1e-12 Score=100.17 Aligned_cols=80 Identities=14% Similarity=0.146 Sum_probs=67.5
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCH
Q 007882 453 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 530 (586)
Q Consensus 453 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~ 530 (586)
..+|.||++||++|+.+.|.++++++.+.+ ++.++.+|.+.+. +.++++.++||+++ +|+. ++.|..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-----RFVGAPSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-----EEECSSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-----EEccCCCH
Confidence 468999999999999999999999999875 4777777776654 57899999999998 6654 57788889
Q ss_pred HHHHHHHHhcC
Q 007882 531 VALYKFLKKNA 541 (586)
Q Consensus 531 ~~l~~~i~~~~ 541 (586)
+.|.++|++.+
T Consensus 74 ~~l~~~l~~~l 84 (85)
T 1nho_A 74 EELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 262
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.31 E-value=1.4e-11 Score=111.42 Aligned_cols=92 Identities=17% Similarity=0.393 Sum_probs=75.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----HHHHHHcCCC-----------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQ----------------- 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~l~~~~~i~----------------- 166 (586)
.+++++|+||++||++|+.++|.|.+++++++. .++.++.|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 136 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSG--PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLK 136 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB--TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc--CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhc
Confidence 588999999999999999999999999999975 3688888888764 4567777764
Q ss_pred ------CCcEEEEEe-CCe-eeeecCCCC--HHHHHHHHHHhcCCC
Q 007882 167 ------GFPTIYFFV-DGQ-HKAYNGGRT--KDAIVTWIKKKIGPG 202 (586)
Q Consensus 167 ------~~Pt~~~~~-~g~-~~~~~g~~~--~~~l~~~i~~~~~~~ 202 (586)
++|++++++ +|+ ...+.|..+ .+.+.++|.+.+..+
T Consensus 137 ~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 137 AIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred cccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999995 884 467888764 788999998887543
No 263
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.31 E-value=4.8e-12 Score=109.19 Aligned_cols=74 Identities=23% Similarity=0.411 Sum_probs=62.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc------------------------HHHHHHcC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~l~~~~~ 164 (586)
+++++||+||++||++|+.+.|.|.++++++++. .++.++.|+++.. ..+++.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 5789999999999999999999999999998731 2688888888763 46889999
Q ss_pred CCCCcEEEEEe--CCeeeeec
Q 007882 165 VQGFPTIYFFV--DGQHKAYN 183 (586)
Q Consensus 165 i~~~Pt~~~~~--~g~~~~~~ 183 (586)
|.++||+++++ +|++....
T Consensus 106 v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCCEEESC
T ss_pred CCCCCEEEEEECCCCeEEecc
Confidence 99999999998 78655444
No 264
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.31 E-value=5.8e-12 Score=108.53 Aligned_cols=84 Identities=17% Similarity=0.321 Sum_probs=67.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH--------------------------HHHHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN--------------------------ELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~l~~~ 162 (586)
++++++|+||++||++|+.++|.|.++++++++. ++.++.|+++... .+++.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 108 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKK 108 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHH
Confidence 5799999999999999999999999999998762 5888888877432 57788
Q ss_pred cCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHH
Q 007882 163 YDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIK 196 (586)
Q Consensus 163 ~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~ 196 (586)
|+|.++|++++++ +|++.... ...+.+.+.+.
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~ 141 (143)
T 4fo5_A 109 YDLRKGFKNFLINDEGVIIAAN--VTPEKLTEILK 141 (143)
T ss_dssp TTGGGCCCEEEECTTSBEEEES--CCHHHHHHHHT
T ss_pred cCCCCCCcEEEECCCCEEEEcc--CCHHHHHHHHH
Confidence 9999999999997 78554322 24566766664
No 265
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.29 E-value=1.1e-11 Score=122.29 Aligned_cols=89 Identities=19% Similarity=0.325 Sum_probs=77.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------------cHHHHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------------ENELAH 161 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------------~~~l~~ 161 (586)
.++++||+||++||++|+.++|.|.++++++++ .++.++.|+++. +..+++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~--~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD--SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWT 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc--CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHH
Confidence 589999999999999999999999999999986 358999998752 347889
Q ss_pred HcCCCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 162 EYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 162 ~~~i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.|+|.++|+++++. +| ....+.|..+.+.+.++|++.+
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999994 88 4567889999999999998876
No 266
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.27 E-value=1.2e-11 Score=112.82 Aligned_cols=91 Identities=18% Similarity=0.268 Sum_probs=75.5
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-----------------------------CcHH
Q 007882 109 NNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------------EENE 158 (586)
Q Consensus 109 ~~~-~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------------~~~~ 158 (586)
.++ ++||+||++||++|+.+.|.|.++++++.+. ++.++.|+++ .+..
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQE 121 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchH
Confidence 466 5999999999999999999999999999873 4888888883 3457
Q ss_pred HHHHcCCCCCcEEEEEe-CCee-ee---------ecCCCCHHHHHHHHHHhcCC
Q 007882 159 LAHEYDVQGFPTIYFFV-DGQH-KA---------YNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 159 l~~~~~i~~~Pt~~~~~-~g~~-~~---------~~g~~~~~~l~~~i~~~~~~ 201 (586)
+++.|+|.++|++++++ +|++ .. +.|..+.+.|.++|.+.+..
T Consensus 122 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 122 VAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 89999999999999996 7844 34 35777889999999888743
No 267
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.27 E-value=6.4e-12 Score=108.06 Aligned_cols=95 Identities=14% Similarity=0.214 Sum_probs=69.6
Q ss_pred chhHHh---hccCCcEEEEEeCCCChhhhhhhHHHHHHHH---HhcCCCcEEEEEEeCCc-cccccCCCCcCcEEEEEe-
Q 007882 442 NFDEIV---LDESKDVLLEIYAPWCGHCQAFEPTYNKLAK---HLRGVDSIVIAKMDGTT-NEHHRAKSDGFPTILFFP- 513 (586)
Q Consensus 442 ~f~~~v---~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~---~~~~~~~i~~~~id~~~-~~~~~~~i~~~Pt~~~~~- 513 (586)
+|++.+ ...+++++|.|||+||++|+.+.|.+.+... ... ..++.+++|.+. +....+++.++||++||.
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDKNLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCGGGCTTCCCSSEEEEECT
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhhHhhcCCCCCCEEEEECC
Confidence 455443 3468999999999999999999999987532 222 247777777433 335678999999999997
Q ss_pred CCCcccCccccccc----------cCHHHHHHHHHhcC
Q 007882 514 AGNKSFDPINVDVD----------RTVVALYKFLKKNA 541 (586)
Q Consensus 514 ~g~~~~~~~~~~g~----------~~~~~l~~~i~~~~ 541 (586)
+|+.+. +..|. .+...+++.+++.+
T Consensus 110 ~G~~v~---~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 110 SLTVRA---DIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TSCBCT---TCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCCEEE---EEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 888875 45554 56777888877654
No 268
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.26 E-value=6.3e-12 Score=110.84 Aligned_cols=90 Identities=17% Similarity=0.375 Sum_probs=70.5
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-ccccCCC--CcCcEEEEE-eCCCcccCcccc
Q 007882 449 DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-EHHRAKS--DGFPTILFF-PAGNKSFDPINV 524 (586)
Q Consensus 449 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-~~~~~~i--~~~Pt~~~~-~~g~~~~~~~~~ 524 (586)
..++++||+|||+||++|+.+.|.|.++++.......+..+.+|.... .+..+.+ .++||+++| ++|+.+. ++
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~---~~ 120 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHP---EI 120 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCT---TC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEE---EE
Confidence 568999999999999999999999999876654323566666666555 4566777 679999999 7888764 45
Q ss_pred cc----------ccCHHHHHHHHHhcC
Q 007882 525 DV----------DRTVVALYKFLKKNA 541 (586)
Q Consensus 525 ~g----------~~~~~~l~~~i~~~~ 541 (586)
.| ..+.++|+++|++.+
T Consensus 121 ~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 121 INENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred eCCCCccchhcccCCHHHHHHHHHHHH
Confidence 55 378999999998765
No 269
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.91 E-value=5e-13 Score=115.25 Aligned_cols=79 Identities=23% Similarity=0.483 Sum_probs=64.0
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-------------------------HHHHHH
Q 007882 109 NNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------------------------NELAHE 162 (586)
Q Consensus 109 ~~~-~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------~~l~~~ 162 (586)
+++ +++|+||++||++|+.+.|.|.+++++++..+.++.++.|+++.. ..+++.
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 466 999999999999999999999999999854334678888877654 368899
Q ss_pred cCCCCCcEEEEEe-CCeeeeecCCCC
Q 007882 163 YDVQGFPTIYFFV-DGQHKAYNGGRT 187 (586)
Q Consensus 163 ~~i~~~Pt~~~~~-~g~~~~~~g~~~ 187 (586)
|+|.++|++++++ +|++....|...
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 9999999999997 886655555433
No 270
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.26 E-value=1.9e-11 Score=110.70 Aligned_cols=91 Identities=16% Similarity=0.250 Sum_probs=74.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-----------------------------CcHHH
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------------EENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------------~~~~l 159 (586)
.++++||+||++||++|+.++|.|.++++++.+ .+.++.|+++ .+..+
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~---~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 108 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRG---KVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEV 108 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT---TEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc---CeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchH
Confidence 579999999999999999999999999999977 3899999883 34578
Q ss_pred HHHcCCCCCcEEEEEe-CCeeeee---------cCCCCHHHHHHHHHHhcCCC
Q 007882 160 AHEYDVQGFPTIYFFV-DGQHKAY---------NGGRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 160 ~~~~~i~~~Pt~~~~~-~g~~~~~---------~g~~~~~~l~~~i~~~~~~~ 202 (586)
++.|++.++|++++++ +|++... .|..+.+.|.+.|.+.+...
T Consensus 109 ~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 109 AKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 8999999999999995 7754332 23336788999988887543
No 271
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.25 E-value=1e-11 Score=108.32 Aligned_cols=96 Identities=16% Similarity=0.289 Sum_probs=76.0
Q ss_pred cchhHHhh---ccCCcEEEEEe-CCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCccc-------------ccc
Q 007882 441 NNFDEIVL---DESKDVLLEIY-APWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE-------------HHR 500 (586)
Q Consensus 441 ~~f~~~v~---~~~~~~~v~f~-~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~~-------------~~~ 500 (586)
.++.+.+. ..+++++|+|| ++||++|+.+.|.+ .++.+.+.. ++.++.+|.+... +..
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHH
Confidence 34555442 35789999999 99999999999999 777665533 5888999987642 367
Q ss_pred CCCCcCcEEEEE-eCCCcccCcccccccc--CHHHHHHHHHhcCC
Q 007882 501 AKSDGFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 542 (586)
Q Consensus 501 ~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 542 (586)
|+|.++||++++ ++|+.+. ++ |.. +.+.+.++|++.++
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~---~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLA---RM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEE---EE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCCCCEEE---Ee-cCCCCCHHHHHHHHHHHHh
Confidence 999999999999 7787764 56 877 89999999988654
No 272
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.23 E-value=1.8e-12 Score=104.78 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=59.8
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC------ccccccCCCCcCcEEEEEeCCCcccCcccc
Q 007882 451 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------TNEHHRAKSDGFPTILFFPAGNKSFDPINV 524 (586)
Q Consensus 451 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~------~~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~ 524 (586)
++.++|.|||+||++|+.+.|.|+++++.+. ++.++.+ ...+..++|+++||+++ +|+ .+
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~------~~ 77 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------TY 77 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE------EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE------Ee
Confidence 5677999999999999999999999986653 4555522 22357899999999877 553 37
Q ss_pred ccccCHHHHHHHHHhc
Q 007882 525 DVDRTVVALYKFLKKN 540 (586)
Q Consensus 525 ~g~~~~~~l~~~i~~~ 540 (586)
.|.++.+.|.+|+.-.
T Consensus 78 ~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 78 TGVRSLEALAVASGYP 93 (106)
T ss_dssp ESCCCHHHHHHHHTCC
T ss_pred cCCCCHHHHHHHhCCc
Confidence 8999999999998543
No 273
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.23 E-value=4.6e-11 Score=106.29 Aligned_cols=92 Identities=18% Similarity=0.345 Sum_probs=75.7
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC--CCceEEEEEeCCCc----------------------------H
Q 007882 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA--NESVVLAKVDATEE----------------------------N 157 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~-C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~----------------------------~ 157 (586)
.++++||+||++||++ |+.++|.|.+++++++.. ..++.++.|+++.. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5789999999999998 999999999999999642 23688888888631 2
Q ss_pred HHHHHcCCCCCc---------------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 158 ELAHEYDVQGFP---------------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 158 ~l~~~~~i~~~P---------------t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
.+++.|+|...| +++++. +| ....+.|..+.+.|.+.|.+.+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 578899999888 888885 78 45678898999999999887763
No 274
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.22 E-value=1.5e-11 Score=93.36 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=62.0
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccccccCCCCcCcEEEEEeCCCcccCcccccccc-CHHH
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDR-TVVA 532 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~-~~~~ 532 (586)
..|.||++||++|+.+.|.++++++.+.. ++.++.+| +...+..++|.++||+++ +|+.+ ..|.. +.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~-~~~~~~~~~v~~~Pt~~~--~G~~~-----~~G~~~~~~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK-EMDQILEAGLTALPGLAV--DGELK-----IMGRVASKEE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC-SHHHHHHHTCSSSSCEEE--TTEEE-----ECSSCCCHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec-CHHHHHHCCCCcCCEEEE--CCEEE-----EcCCCCCHHH
Confidence 46889999999999999999999998865 68899999 445567899999999998 77654 22876 8999
Q ss_pred HHHHH
Q 007882 533 LYKFL 537 (586)
Q Consensus 533 l~~~i 537 (586)
|.++|
T Consensus 72 l~~~l 76 (77)
T 1ilo_A 72 IKKIL 76 (77)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98876
No 275
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.21 E-value=5.2e-11 Score=110.39 Aligned_cols=91 Identities=12% Similarity=0.282 Sum_probs=73.9
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-----------------------------CcHH
Q 007882 109 NNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------------EENE 158 (586)
Q Consensus 109 ~~~-~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------------~~~~ 158 (586)
.++ ++||+||++||++|+.++|.|.++++++++. ++.++.|+++ ....
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~ 134 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQS 134 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccH
Confidence 466 5999999999999999999999999999873 4899999883 3457
Q ss_pred HHHHcCCCCCcEEEEEe-CCeeeeecC-----------CCCHHHHHHHHHHhcCCC
Q 007882 159 LAHEYDVQGFPTIYFFV-DGQHKAYNG-----------GRTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 159 l~~~~~i~~~Pt~~~~~-~g~~~~~~g-----------~~~~~~l~~~i~~~~~~~ 202 (586)
+++.|+|.++|++++++ +|++. |.| ..+.+.|.+.|.+.+...
T Consensus 135 ~~~~~~v~~~P~~~liD~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 135 VAKAYGAACTPDFFLYDRERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp HHHHHTCCEESEEEEECTTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCeEEEECCCCcEE-EeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 89999999999999995 77543 443 345688888888877543
No 276
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.84 E-value=1.3e-12 Score=110.68 Aligned_cols=91 Identities=20% Similarity=0.250 Sum_probs=74.5
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCcc----ccccCCCCcCcEEEEE--eCCCc--
Q 007882 449 DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN----EHHRAKSDGFPTILFF--PAGNK-- 517 (586)
Q Consensus 449 ~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~----~~~~~~i~~~Pt~~~~--~~g~~-- 517 (586)
..++++||+||++||++|+.+.|.+ .++++.+.. ++.++.+|++.+ .+..++|.++||+++| .+|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4578999999999999999999999 888887765 577888887532 2478999999999999 45766
Q ss_pred ccCccccccccCHHHHHHHHHhcCCCC
Q 007882 518 SFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 518 ~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+. ++.|..+.+.|.++|++.+...
T Consensus 95 ~~---~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 95 VG---RLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 43 7889889999999998877543
No 277
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.20 E-value=5.8e-11 Score=102.70 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=81.1
Q ss_pred EEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc--------------------
Q 007882 436 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------- 495 (586)
Q Consensus 436 ~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-------------------- 495 (586)
..+++..+..... .+++++|.||++||++|+.+.|.+.++++.+.+. +.++.++.+.
T Consensus 15 ~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 5678888776543 5789999999999999999999999999998764 6677776532
Q ss_pred ---------cccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 496 ---------NEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 496 ---------~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
.....|++.++|+++++ ++|+.+. ++.|..+.++|.++|++.+.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRH---FQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEE---EEESCSTTHHHHHHHHHHHT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHh
Confidence 12357899999999999 6776654 67788889999999988754
No 278
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.20 E-value=4.9e-11 Score=107.79 Aligned_cols=91 Identities=13% Similarity=0.212 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c-HHHHH----H--------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E-NELAH----E-------------- 162 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~-~~l~~----~-------------- 162 (586)
+|+++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . ..+.+ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 122 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 122 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccC
Confidence 6899999999999999999999999999999874 47788887651 1 11111 1
Q ss_pred ------------------cCCCCCc---EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcCC
Q 007882 163 ------------------YDVQGFP---TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (586)
Q Consensus 163 ------------------~~i~~~P---t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~~ 201 (586)
+++..+| ++++++ +| ....+.|..+.+.|.+.|.+.+..
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 123 GENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp CC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred CcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 2344677 999995 88 456788999999999999988753
No 279
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.19 E-value=1e-10 Score=102.87 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=64.1
Q ss_pred CCCe-EEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC---------------------CcHHHHHHcCC
Q 007882 109 NNKF-VMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---------------------EENELAHEYDV 165 (586)
Q Consensus 109 ~~~~-~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~i 165 (586)
.+++ ++|+|| ++||++|+.++|.|.++++++++. ++.++.|+++ ....+++.|++
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCC
Confidence 4676 999999 999999999999999999999873 4888888886 34578899999
Q ss_pred CC----CcEEEEEe-CC-eeeeecCCC
Q 007882 166 QG----FPTIYFFV-DG-QHKAYNGGR 186 (586)
Q Consensus 166 ~~----~Pt~~~~~-~g-~~~~~~g~~ 186 (586)
.+ +|++++++ +| ....+.|..
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred CCcCcccceEEEECCCCEEEEEEecCC
Confidence 99 99999996 88 445777733
No 280
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2.5e-11 Score=108.05 Aligned_cols=89 Identities=13% Similarity=0.212 Sum_probs=69.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-------Cc----HHHH-----------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-------EE----NELA----------------- 160 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------~~----~~l~----------------- 160 (586)
+|+++||+|||+||++|+ ++|.|.++++++++. ++.++.|+++ +. ..++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~ 107 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVN 107 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC------------------CCCSCBBCCCBSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCC
Confidence 589999999999999999 999999999999873 4888888763 11 1222
Q ss_pred -------------HHcCCCCCc------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 161 -------------HEYDVQGFP------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 161 -------------~~~~i~~~P------t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+.|++.++| +++++. +| ....+.|..+.+.|.+.|.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 108 GGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp STTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 236788999 888884 88 45678898888999998888764
No 281
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.19 E-value=3e-11 Score=107.58 Aligned_cols=90 Identities=21% Similarity=0.306 Sum_probs=72.5
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcCC-CceEEEEEeCCCc----------------------------HH
Q 007882 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSAN-ESVVLAKVDATEE----------------------------NE 158 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~-C~~~~p~~~~~~~~~~~~~-~~v~~~~vd~~~~----------------------------~~ 158 (586)
+++++||+||++||++ |+.++|.+.+++++++..+ .++.++.|+++.. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999998 9999999999999887521 2589999998742 25
Q ss_pred HHHHcCC---------------CCCcEEEEEeCCe-eeeecCCC--CHHHHHHHHHHh
Q 007882 159 LAHEYDV---------------QGFPTIYFFVDGQ-HKAYNGGR--TKDAIVTWIKKK 198 (586)
Q Consensus 159 l~~~~~i---------------~~~Pt~~~~~~g~-~~~~~g~~--~~~~l~~~i~~~ 198 (586)
+++.|++ .++|+++++++|+ ...+.|.. +.+.|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 5789999999774 46778877 889999988765
No 282
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.18 E-value=6.4e-11 Score=107.33 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHH-HH--------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELA-HE-------------- 162 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~-~~-------------- 162 (586)
+++++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . ..++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~ 124 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 124 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccC
Confidence 5789999999999999999999999999999873 48888888762 1 1223 22
Q ss_pred ---------------cCCCCCc------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 163 ---------------YDVQGFP------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 163 ---------------~~i~~~P------t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
+++.++| +++++. +| ....+.|..+.+.+.+.|.+.+.
T Consensus 125 ~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 125 GENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp STTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 3777888 888885 88 45678898899999999988763
No 283
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.18 E-value=8.1e-11 Score=103.88 Aligned_cols=91 Identities=18% Similarity=0.306 Sum_probs=74.9
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC--CCceEEEEEeCCCc----------------------------H
Q 007882 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA--NESVVLAKVDATEE----------------------------N 157 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~-C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~----------------------------~ 157 (586)
.|+++||+||++||++ |+.++|.|.++++++++. ..++.++.|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5899999999999998 999999999999998752 12688888887642 1
Q ss_pred HHHHHcCCCCCc---------------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 158 ELAHEYDVQGFP---------------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 158 ~l~~~~~i~~~P---------------t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.+++.|+|...| +++++. +| ....+.|..+.+.|.+.|.+.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 478889999999 788885 78 4567888889999999988765
No 284
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.17 E-value=7.7e-11 Score=104.60 Aligned_cols=89 Identities=12% Similarity=0.149 Sum_probs=69.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHH-HHHc-------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NEL-AHEY------------- 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l-~~~~------------- 163 (586)
+|+++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . ... .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 107 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVN 107 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeec
Confidence 5899999999999999999999999999999873 58899998753 1 122 1222
Q ss_pred ----------------C-----CCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 164 ----------------D-----VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 164 ----------------~-----i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+ |+++|+++++. +| ....+.|..+.+.+.+.|.+.+
T Consensus 108 ~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 108 GSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp STTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3 44468999985 88 4567889888888888887765
No 285
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=2.7e-12 Score=112.85 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=65.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH-HHHHhhcCCCceEEEEEeCCCcHHHHHH----------------------cC-
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAA-AATELKSANESVVLAKVDATEENELAHE----------------------YD- 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~-~~~~~~~~~~~v~~~~vd~~~~~~l~~~----------------------~~- 164 (586)
++++++|+||++||++|+.+.|.|.+ ++.++.. +.++.++.|+++...+.+++ |+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 110 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD-NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYAL 110 (159)
Confidence 57899999999999999999999998 8888761 13688888888765443333 33
Q ss_pred -CCCCcEEEEE-eCCeee-eecCCCCHHHHHHHHHHhc
Q 007882 165 -VQGFPTIYFF-VDGQHK-AYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 165 -i~~~Pt~~~~-~~g~~~-~~~g~~~~~~l~~~i~~~~ 199 (586)
+.++|+++++ ++|++. .+.| .+.+.+.+++.+..
T Consensus 111 ~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 111 RDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 5679999999 588544 4555 55666766665543
No 286
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.16 E-value=7.2e-11 Score=104.89 Aligned_cols=90 Identities=12% Similarity=0.215 Sum_probs=71.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHH-Hc-------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAH-EY------------- 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~-~~------------- 163 (586)
+++++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . ...++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVN 108 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccC
Confidence 5899999999999999999999999999999873 48999998852 1 22333 33
Q ss_pred ----------------CC--CCCc---EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 164 ----------------DV--QGFP---TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 164 ----------------~i--~~~P---t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++ .++| +++++. +| ....+.|..+.+.|.++|.+.+.
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 109 GENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp STTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 6678 888885 88 45678898888899999988764
No 287
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.15 E-value=5.4e-11 Score=106.92 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHHH-c-------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHE-Y------------- 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~~-~------------- 163 (586)
+++++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . ..++++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 125 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVT 125 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccC
Confidence 5899999999999999999999999999999872 48999998863 1 123333 2
Q ss_pred ----------CCCCCc-------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 164 ----------DVQGFP-------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 164 ----------~i~~~P-------t~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.+.++| +++++. +| ....+.|..+.+.|.+.|.+.+
T Consensus 126 g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 126 GTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp STTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 234578 788885 88 4567889889999999988765
No 288
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.15 E-value=6.5e-11 Score=108.61 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=69.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c-H---HHHH------HcC-------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E-N---ELAH------EYD------- 164 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~-~---~l~~------~~~------- 164 (586)
+++++||+|||+||++|+.++|.|.++++++++. ++.++.|+++. . . ..++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~ 123 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFE 123 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEE
Confidence 5899999999999999999999999999999873 48999998851 1 1 2222 332
Q ss_pred ----------------------------------------------CCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHH
Q 007882 165 ----------------------------------------------VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIK 196 (586)
Q Consensus 165 ----------------------------------------------i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~ 196 (586)
|...|+++++. +| ...+|.|..+.+.|.+.|.
T Consensus 124 d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~ 203 (208)
T 2f8a_A 124 KCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIE 203 (208)
T ss_dssp CCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred EeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHH
Confidence 33458899995 88 4567889888888888887
Q ss_pred Hhc
Q 007882 197 KKI 199 (586)
Q Consensus 197 ~~~ 199 (586)
+.+
T Consensus 204 ~ll 206 (208)
T 2f8a_A 204 ALL 206 (208)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 289
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.15 E-value=8.8e-11 Score=99.96 Aligned_cols=99 Identities=19% Similarity=0.362 Sum_probs=75.3
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------ 496 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------ 496 (586)
+..++++.+..... .+++++|.||++||++|+.+.|.+.++++.+. ++.++.++++.+
T Consensus 9 l~~~~g~~~~l~~~-~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1lu4_A 9 ATTLSGAPFDGASL-QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNL 84 (136)
T ss_dssp EEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEE
T ss_pred eecCCCCeecHHHh-CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEE
Confidence 33344555544332 47899999999999999999999999999986 467777776541
Q ss_pred ------ccccCCCCcCcEEEEEe-CCCcccCccccc---cccCHHHHHHHHHhcC
Q 007882 497 ------EHHRAKSDGFPTILFFP-AGNKSFDPINVD---VDRTVVALYKFLKKNA 541 (586)
Q Consensus 497 ------~~~~~~i~~~Pt~~~~~-~g~~~~~~~~~~---g~~~~~~l~~~i~~~~ 541 (586)
....+++.++|+++++. +|+.+ ++. |..+.++|.++|++.+
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~----~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTST----FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCEE----EECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcEE----EEEcCCCccCHHHHHHHHHHHh
Confidence 23568999999999994 55543 577 8889999999998764
No 290
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.15 E-value=1.2e-10 Score=101.35 Aligned_cols=89 Identities=17% Similarity=0.262 Sum_probs=73.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--------------------------cccCC-
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------HHRAK- 502 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--------------------------~~~~~- 502 (586)
.++++||.||++||++|+.+.|.+.++++.+.+ .++.++.++.+... ...|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK-GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 578999999999999999999999999999855 46888888875211 14567
Q ss_pred -CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 503 -SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 503 -i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+.++|+++++ ++|+.+. ++.|..+.+.|.++|++...
T Consensus 102 ~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQ---TITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CSCCSSEEEEEETTTTEEE---ECCSCCCHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHH
Confidence 9999999998 5676654 78899999999999987654
No 291
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.14 E-value=3.1e-09 Score=100.72 Aligned_cols=197 Identities=18% Similarity=0.270 Sum_probs=141.7
Q ss_pred CCeEEeC-hhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEE
Q 007882 93 KDVVVLK-ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (586)
Q Consensus 93 ~~v~~l~-~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 171 (586)
..+..|+ .+.++.++..+++++|.|+++|| ....+.|.++|..+.+ .+.|+.+. +..+++++++.+ |++
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~---~~~F~~~~---~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRD---NYRFAHTN---VESLVNEYDDNG-EGI 75 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTT---TSCEEEEC---CHHHHHHHCSSS-EEE
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhccc---CcEEEEEC---hHHHHHHhCCCC-CcE
Confidence 4477884 67788888888899999999985 4467899999999976 68888774 467999999997 999
Q ss_pred EEEeCC--------eeeee-cCCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEecC-CCCc------ch
Q 007882 172 YFFVDG--------QHKAY-NGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNS-LVGS------ES 235 (586)
Q Consensus 172 ~~~~~g--------~~~~~-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~~-~~~~------~~ 235 (586)
++|+.+ ....| .|.++.+.|.+||....-|.+.+++.. ....+ ...+. ++.|+.. .... -.
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~-~~~~~-~v~~~~~~~~~~~~~~~~~~ 152 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTED-NKDLI-QGKDL-LIAYYDVDYEKNAKGSNYWR 152 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTT-THHHH-SSSSE-EEEEECCBTTTBHHHHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccc-cHhhh-cCCCe-EEEEeecchhhcchhHHHHH
Confidence 999842 45678 999999999999999998988888764 34555 33344 4444432 2111 12
Q ss_pred HHHHHhc-cccCc---eeEEecCCh---hHHHhcCCCC-CCCCCeeEEeccCCcceecccCCCChhH--HHHHHHhcC
Q 007882 236 EVLADAS-RLEDD---VNFYQTTNP---DVAKIFHLDS-KVNRPALVMVKKETEKISYFDGKFDKST--IADFVFSNK 303 (586)
Q Consensus 236 ~~f~~~~-~~~~~---~~F~~~~~~---~~~~~~~~~~-~~~~p~l~~~~~~~~~~~~y~g~~~~~~--i~~fi~~~~ 303 (586)
..+..++ ++++. +.|+.+... .+...||+.. ....|.++++.... ....+.+.++.+. |.+|+....
T Consensus 153 ~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-~ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 153 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-CEEECCSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-cEecCCcccCcchHHHHHHHHHHH
Confidence 3344455 55555 889886543 4777889931 23579999886533 3445678888888 999997643
No 292
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.14 E-value=1.4e-10 Score=104.11 Aligned_cols=89 Identities=16% Similarity=0.161 Sum_probs=68.4
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHHH-cCCC----------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHE-YDVQ---------- 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~~-~~i~---------- 166 (586)
+|+++||+||++||++|+.++|.|.++++++++ .++.++.|+++. . ..++++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~--~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~ 114 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP--SHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKIL 114 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT--TSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc--CCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeecc
Confidence 689999999999999999999999999999987 348888888753 2 244555 4432
Q ss_pred ----------------CCcE----EEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 167 ----------------GFPT----IYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 167 ----------------~~Pt----~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|+ ++++. +| ....|.|..+.+.+.+.|.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 115 GSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp STTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred CccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 2676 77775 88 4567888888877777776655
No 293
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.14 E-value=9e-11 Score=103.58 Aligned_cols=104 Identities=13% Similarity=0.190 Sum_probs=79.4
Q ss_pred CeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC-------------------
Q 007882 434 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------------------- 494 (586)
Q Consensus 434 ~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~------------------- 494 (586)
.+..++++.+.... ..++++||+||++||++|+.+.|.|.++++.++.. .+.++.++.+
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 46667777776544 35789999999999999999999999999987542 3444444421
Q ss_pred -----------ccccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 495 -----------TNEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 495 -----------~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
...+..|+|.++|+++++ ++|+.+. ++.|..+.+.|.++|++.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQR---IVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEE---EEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHH
Confidence 111246899999999999 6777664 67788999999999998765
No 294
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.13 E-value=4.4e-11 Score=104.97 Aligned_cols=66 Identities=20% Similarity=0.242 Sum_probs=54.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCC---CCcCcEEEEEeCC-Ccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAK---SDGFPTILFFPAG-NKS 518 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~---i~~~Pt~~~~~~g-~~~ 518 (586)
.+++++|.|||+||++|+.+.|.+.+++..+. ++.++.+|.+.+. ...|. +.++||+++|.+| +.+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~ 124 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLL 124 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEE
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEE
Confidence 46789999999999999999999999998764 4778888776554 35665 9999999999875 544
No 295
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.12 E-value=1.7e-10 Score=98.03 Aligned_cols=100 Identities=22% Similarity=0.319 Sum_probs=76.4
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-------------------
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------------------- 495 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~------------------- 495 (586)
+..+++..+..... .+++++|+||++||++|+.+.|.+.++.+.+. ++.++.++.+.
T Consensus 10 ~~~~~g~~~~l~~~-~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGESL-LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHHh-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 44455565554433 57899999999999999999999999999986 46667776643
Q ss_pred ------cccccCCCCcCcEEEEEe-CCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 496 ------NEHHRAKSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 496 ------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
.....|++.++|+++++. +|+.+ ++.|..+.++|.++|++.++
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i~----~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNVD----VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCEE----EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCEE----EEecCCCHHHHHHHHHHHhc
Confidence 113578999999999995 55442 67888899999999988653
No 296
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.12 E-value=1.3e-10 Score=100.12 Aligned_cols=84 Identities=14% Similarity=0.275 Sum_probs=70.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------------------------cccccCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------NEHHRAK 502 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------------------------~~~~~~~ 502 (586)
.+++++|+||++||++|+.+.|.+.++.+.+.. .++.++.++++. .....|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS-DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC-SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 578999999999999999999999999999874 357888887743 2236789
Q ss_pred CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHH
Q 007882 503 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFL 537 (586)
Q Consensus 503 i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i 537 (586)
+.++|+++++ ++|+.+. ++.|..+.+.|.++|
T Consensus 112 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEK---TKIGPMTAEQLKEWT 144 (145)
T ss_dssp CCEESEEEEECTTCCEEE---EEESCCCHHHHHHHH
T ss_pred cCccCeEEEEcCCCcEEE---EEcCCcCHHHHHHhh
Confidence 9999999999 6777654 788999999999887
No 297
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.10 E-value=2.3e-10 Score=100.97 Aligned_cols=105 Identities=18% Similarity=0.282 Sum_probs=80.5
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccC-----------
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRA----------- 501 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~----------- 501 (586)
+..+++..+..... .++++||.||++||++|+.+.|.+.++.+.+.+. .+.++.++++.+. ...+
T Consensus 19 l~~~~g~~~~l~~~-~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 19 GVTVDGKPFSSASL-KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EECTTSCEEEGGGG-TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeCCCCCEechhHc-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 44455555554332 5789999999999999999999999999999863 5888888876533 2233
Q ss_pred ----------------CCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 502 ----------------KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 502 ----------------~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
++.++|+++++ ++|+.+. ++.|..+.+.|.++|++.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSG---VIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEE---EECSCCCHHHHHHHHHHHHC--
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHhhh
Confidence 79999999999 5676654 7789899999999999877543
No 298
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.10 E-value=9.8e-09 Score=97.09 Aligned_cols=197 Identities=13% Similarity=0.179 Sum_probs=140.5
Q ss_pred CCeEEeC-hhhHHHHHhC-CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcE
Q 007882 93 KDVVVLK-ERNFSDVIEN-NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (586)
Q Consensus 93 ~~v~~l~-~~~~~~~~~~-~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt 170 (586)
..+..|+ .++++.+++. .++++|-|+++|| ....+.|.++|+.+.+ .+.|+.+. +.++++++++.+ |+
T Consensus 6 P~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~---~~~F~~t~---~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLRE---DYKFHHTF---STEIAKFLKVSL-GK 75 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT---TCCEEEEC---CHHHHHHHTCCS-SE
T ss_pred CCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc---CcEEEEEC---cHHHHHHcCCCC-Ce
Confidence 3467775 4888888887 8999999999985 4678899999999977 68888874 568899999987 99
Q ss_pred EEEEeC--------Ceeeeec--CCCCHHHHHHHHHHhcCCCcccccchhHHHHhcccCCeEEEEEec-CCC---Cc---
Q 007882 171 IYFFVD--------GQHKAYN--GGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLN-SLV---GS--- 233 (586)
Q Consensus 171 ~~~~~~--------g~~~~~~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~l~~~~~~~~~~~i~~~~-~~~---~~--- 233 (586)
+++|+. .....|. |..+.+.|.+||....-|.+.+++.. ....+.... ..+++|+. +.. ..
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~~~~~-~l~~~~~~~d~~~~~~~~~~ 153 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTS-NDAKRYSKR-PLVVVYYSVDFSFDYRTATQ 153 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTT-THHHHSCSS-SEEEEEECCCCSTTTHHHHH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCcc-chhhhhccC-ccEEEEEecccccccchhHH
Confidence 999984 3456788 47899999999999998988888764 344444433 44444443 211 11
Q ss_pred -chHHHHHhc-cccCceeEEecCCh---hHHHhcCCCCCCCCCeeEEeccCCcceeccc-CCCChhHHHHHHHhcC
Q 007882 234 -ESEVLADAS-RLEDDVNFYQTTNP---DVAKIFHLDSKVNRPALVMVKKETEKISYFD-GKFDKSTIADFVFSNK 303 (586)
Q Consensus 234 -~~~~f~~~~-~~~~~~~F~~~~~~---~~~~~~~~~~~~~~p~l~~~~~~~~~~~~y~-g~~~~~~i~~fi~~~~ 303 (586)
-...+..++ +++ .+.|+.+... ..++.||+......|.++++.... ....+. +.++.+.|.+|+....
T Consensus 154 ~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 154 FWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESG-KKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTS-CEEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCC-ceecCCcccCCHHHHHHHHHHHH
Confidence 134455566 567 8999886544 356778887532235777666433 333444 6889999999997643
No 299
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.10 E-value=6.7e-10 Score=95.48 Aligned_cols=89 Identities=15% Similarity=0.237 Sum_probs=70.3
Q ss_pred HhCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCCCc--HHHHHHcCCCCCcEEEEEe-C-C-e
Q 007882 107 IENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEE--NELAHEYDVQGFPTIYFFV-D-G-Q 178 (586)
Q Consensus 107 ~~~~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~i~~~Pt~~~~~-~-g-~ 178 (586)
-+.+++++|+||++||.+|+.+.... .++.+.++. ++.++.+|.+.. ..+.++|++.++|+++|+. + | .
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~---~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~ 115 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE---HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQK 115 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH---TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCC
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc---CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcE
Confidence 35689999999999999999997654 445555555 699999998653 4688999999999999996 5 6 3
Q ss_pred eeeecCCCCHHHHHHHHHHhc
Q 007882 179 HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 179 ~~~~~g~~~~~~l~~~i~~~~ 199 (586)
...+.| .+.+.+.++|++.+
T Consensus 116 l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 116 LVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp CEEESS-CCHHHHHHHHHHHH
T ss_pred eeecCC-CCHHHHHHHHHHHH
Confidence 444545 89999998887765
No 300
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.10 E-value=1.9e-10 Score=99.96 Aligned_cols=91 Identities=18% Similarity=0.313 Sum_probs=73.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------ccccCCCCc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EHHRAKSDG 505 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------~~~~~~i~~ 505 (586)
.++++||+||++||++|+.+.|.+.++.+.+.. .++.++.++.+.. ....|++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS-QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 478999999999999999999999999999876 2466776666432 235789999
Q ss_pred CcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 506 FPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 506 ~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+|+++++ ++|+.+. ++.|..+.+.|.++|++.+...
T Consensus 104 ~P~~~lid~~G~i~~---~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 104 LPTTFLINPEGKVVK---VVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp SCEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHSCC-
T ss_pred CCeEEEECCCCcEEE---EEeCCCCHHHHHHHHHHHHhhh
Confidence 9999999 6677654 6778889999999999877543
No 301
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.10 E-value=3.2e-11 Score=114.58 Aligned_cols=84 Identities=20% Similarity=0.385 Sum_probs=65.3
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC------CcHHHHHHcCCCCCcEEEEE
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------EENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------~~~~l~~~~~i~~~Pt~~~~ 174 (586)
..+.+.+.+.. +|.|||+||+||+++.|.|++++++++ .|||+ +++++|++++|+++||+++
T Consensus 190 ~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~---------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i- 257 (291)
T 3kp9_A 190 VGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII- 257 (291)
T ss_dssp HHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE-
T ss_pred HHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcC---------EEEEeecCchhhHHHHHHHcCCcccCeEEE-
Confidence 34555554443 689999999999999999999886541 34554 3789999999999999544
Q ss_pred eCCeeeeecCCCCHHHHHHHHHHhc
Q 007882 175 VDGQHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 175 ~~g~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+|+ .|.|.++.+.+.+|+....
T Consensus 258 -~G~--~~~G~~~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 258 -NGR--TYTGVRSLEALAVASGYPL 279 (291)
T ss_dssp -TTE--EEESCCCHHHHHHHTCCCC
T ss_pred -CCE--EecCCCCHHHHHHHHCCCC
Confidence 886 3999999999999985443
No 302
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.09 E-value=2.3e-10 Score=103.35 Aligned_cols=89 Identities=18% Similarity=0.282 Sum_probs=73.3
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------------cHHHHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 162 (586)
.++++||+|| ++||++|+.++|.|.++++++++. ++.++.|+++. +..+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 5789999999 999999999999999999999863 58888888764 3468889
Q ss_pred cCCC------CCcEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHhc
Q 007882 163 YDVQ------GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKI 199 (586)
Q Consensus 163 ~~i~------~~Pt~~~~~-~g~-~~~~~g~~----~~~~l~~~i~~~~ 199 (586)
|++. ++|++++++ +|+ ...+.|.. +.+.+.+.|++..
T Consensus 108 ~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9998 999999995 884 45666654 6778888877665
No 303
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.09 E-value=2.2e-10 Score=103.10 Aligned_cols=88 Identities=15% Similarity=0.142 Sum_probs=67.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------cH----HHHHHc--------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------EN----ELAHEY-------------- 163 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~~----~l~~~~-------------- 163 (586)
+++++||+||++||++|+.++|.|.++++++++ .++.++.|+++. .. .+++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~--~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE--CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 123 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG--GTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc--CCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCC
Confidence 589999999999999999999999999999987 348888998752 11 122221
Q ss_pred -----------------C-----CCCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHh
Q 007882 164 -----------------D-----VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 164 -----------------~-----i~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+ |+.+|+++++. +| ....+.|..+.+.|.++|++.
T Consensus 124 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 124 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred cchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 33469999995 88 456788988888888776654
No 304
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.08 E-value=3.9e-10 Score=102.57 Aligned_cols=90 Identities=11% Similarity=0.173 Sum_probs=74.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------------------------cHHHHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 162 (586)
.++++||+|| ++||++|+.++|.|.++++++++. ++.++.|+++. +..+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 4789999999 999999999999999999999862 58888888764 3467888
Q ss_pred cCCC-----CCcEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHhcC
Q 007882 163 YDVQ-----GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKIG 200 (586)
Q Consensus 163 ~~i~-----~~Pt~~~~~-~g~-~~~~~g~~----~~~~l~~~i~~~~~ 200 (586)
|++. ++|+++++. +|+ ...+.|.. +.+.+.+.|++...
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999 999999996 884 45666654 67899999888764
No 305
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.08 E-value=3.2e-10 Score=93.71 Aligned_cols=104 Identities=14% Similarity=0.251 Sum_probs=91.5
Q ss_pred HhcCCCccc--ccchhHHHHhcccCCeEEEEEecCCCCcchHHHHHhccccCceeEEecCChhHHHhcCCCCCCCCCeeE
Q 007882 197 KKIGPGIYN--ITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALV 274 (586)
Q Consensus 197 ~~~~~~~~~--i~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~f~~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~l~ 274 (586)
+..+|+... |++.+++++|+..+++++||||.+.+++....|.+++...+++.|+.+++++++++++++ .|+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~----~~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT----GNTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCC----SSCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCC----CCeEE
Confidence 455666544 899999999999999999999999999999999999855599999999999999999997 48999
Q ss_pred EeccCCcceecccC----CCChhHHHHHHHhcCC
Q 007882 275 MVKKETEKISYFDG----KFDKSTIADFVFSNKL 304 (586)
Q Consensus 275 ~~~~~~~~~~~y~g----~~~~~~i~~fi~~~~~ 304 (586)
+|+..++....|.| .++.++|.+||..+++
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 99998878888986 7899999999998763
No 306
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.08 E-value=2.7e-10 Score=103.95 Aligned_cols=89 Identities=10% Similarity=0.217 Sum_probs=73.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
++++++|+|| ++||++|+.++|.|.++++++.+. ++.++.|+++. +..+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 4789999999 999999999999999999999873 58888888764 3478
Q ss_pred HHHcCCC-----CCcEEEEEe-CCee-eeecCCC----CHHHHHHHHHHhc
Q 007882 160 AHEYDVQ-----GFPTIYFFV-DGQH-KAYNGGR----TKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~-----~~Pt~~~~~-~g~~-~~~~g~~----~~~~l~~~i~~~~ 199 (586)
++.|++. ++|++++++ +|++ ..+.|.. +.+.+.+.|.+..
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8999999 999999996 8844 5666754 5678888887664
No 307
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.08 E-value=2.2e-10 Score=103.25 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=67.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHHHcCC------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHEYDV------------ 165 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~~~~i------------ 165 (586)
+++++||+||++||++|+.++|.|.++++++++. ++.++.|+++. . .++++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 125 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 125 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSS
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCC
Confidence 5799999999999999999999999999999873 48889998752 1 223333322
Q ss_pred ------------------------CCCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHh
Q 007882 166 ------------------------QGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 166 ------------------------~~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+.+|+++++. +| ....+.|..+.+.|.+.|++.
T Consensus 126 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 126 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2258999995 88 456788888888877777654
No 308
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.08 E-value=3.4e-10 Score=99.39 Aligned_cols=87 Identities=13% Similarity=0.216 Sum_probs=68.3
Q ss_pred CCC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHc
Q 007882 109 NNK-FVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEY 163 (586)
Q Consensus 109 ~~~-~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~ 163 (586)
.++ +++|+|| ++||++|+.++|.|.++++++++ .++.++.|+++. +..+++.|
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN--DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAY 111 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS--SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH--CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHc
Confidence 466 9999998 99999999999999999998875 358888888763 56788999
Q ss_pred CCC----CCc--EEEEEe-CC-eeeeecCCC----CHHHHHHHHHH
Q 007882 164 DVQ----GFP--TIYFFV-DG-QHKAYNGGR----TKDAIVTWIKK 197 (586)
Q Consensus 164 ~i~----~~P--t~~~~~-~g-~~~~~~g~~----~~~~l~~~i~~ 197 (586)
++. ++| +++++. +| ....+.|.. ..+.+.+.|.+
T Consensus 112 ~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 112 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 998 999 888885 88 445677765 33555555543
No 309
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.08 E-value=1.2e-10 Score=96.17 Aligned_cols=86 Identities=16% Similarity=0.375 Sum_probs=62.3
Q ss_pred hHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----HHHHHHcCCCCCcEEEEEeC
Q 007882 102 NFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQGFPTIYFFVD 176 (586)
Q Consensus 102 ~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~l~~~~~i~~~Pt~~~~~~ 176 (586)
.++.+++. +++++ ||++||++|+.+.|.|.++.. .+.++.||.+.. ..+++++++.++||+ |.+
T Consensus 12 ~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~ 80 (116)
T 2e7p_A 12 KAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIG 80 (116)
T ss_dssp HHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 44555554 45555 999999999999999988642 356677776665 568999999999999 558
Q ss_pred Cee-eeecCCC---CHHHHHHHHHHh
Q 007882 177 GQH-KAYNGGR---TKDAIVTWIKKK 198 (586)
Q Consensus 177 g~~-~~~~g~~---~~~~l~~~i~~~ 198 (586)
|.. ..+.|.. +.+.|.++|.+.
T Consensus 81 g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 81 GKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred CEEECChHHHHHHHhCChHHHHHHHc
Confidence 844 4555544 556777777764
No 310
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.08 E-value=3.1e-10 Score=96.56 Aligned_cols=86 Identities=22% Similarity=0.302 Sum_probs=69.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC------------------------------ccccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------------------------------TNEHH 499 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~------------------------------~~~~~ 499 (586)
.++++||.||++||++|+.+.|.+.++.+.+.. .+.++.++.. .....
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 478999999999999999999999999998543 5777777431 11235
Q ss_pred cCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 500 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 500 ~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
.|++.++|+++++ ++|+.+. ++.|..+.+.|.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVK---THPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEE---EEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEEE---eecCCCcHHHHHHHHHhh
Confidence 7899999999999 6777664 678989999999999864
No 311
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=1e-10 Score=89.34 Aligned_cols=61 Identities=21% Similarity=0.316 Sum_probs=49.7
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-CcHHHHHHcCCCCCcEEEEEeCCee
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQGFPTIYFFVDGQH 179 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~i~~~Pt~~~~~~g~~ 179 (586)
++.||++||++|+.+.|.+.++++++.. .+.++.||.+ +..++++++|++++||+++ +|+.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~ 65 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY---TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAA 65 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE---EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC---eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEE
Confidence 7789999999999999999988766533 5666666664 4678899999999999877 7754
No 312
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.06 E-value=5.2e-10 Score=100.93 Aligned_cols=135 Identities=16% Similarity=0.256 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC
Q 007882 403 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 482 (586)
Q Consensus 403 ~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~ 482 (586)
...+.+|+..+..|.+.............+-.+..++++.+.-.-. .+++++|+||++||++|+.+.|.+.++.+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 13 AVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSDF-RGKTLLVNLWATWCVPCRKEMPALDELQGKLSG 91 (186)
T ss_dssp HHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGGGG-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB
T ss_pred HHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHHHc-CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc
Confidence 4578899999999998877554332222222334444544433222 478999999999999999999999999999874
Q ss_pred CCcEEEEEEeCCccc-------cccCCCC-----------------------cCcEEEEE-eCCCcccCcccccccc--C
Q 007882 483 VDSIVIAKMDGTTNE-------HHRAKSD-----------------------GFPTILFF-PAGNKSFDPINVDVDR--T 529 (586)
Q Consensus 483 ~~~i~~~~id~~~~~-------~~~~~i~-----------------------~~Pt~~~~-~~g~~~~~~~~~~g~~--~ 529 (586)
.++.++.|+.+... ..++++. ++|+++++ ++|+.+. ++.|.. +
T Consensus 92 -~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~~ 167 (186)
T 1jfu_A 92 -PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIA---TIAGPAEWA 167 (186)
T ss_dssp -TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEE---EEESCCCTT
T ss_pred -CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEE---EEecCCccC
Confidence 35777777766431 1234442 89999999 5676654 566755 4
Q ss_pred HHHHHHHHHhcCC
Q 007882 530 VVALYKFLKKNAS 542 (586)
Q Consensus 530 ~~~l~~~i~~~~~ 542 (586)
.++|.++|++.+.
T Consensus 168 ~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 168 SEDALKLIRAATG 180 (186)
T ss_dssp SHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 7889999988764
No 313
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.06 E-value=4.6e-10 Score=96.32 Aligned_cols=86 Identities=17% Similarity=0.366 Sum_probs=66.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHH---HHHHhcCCCcEEEEEEeCCccc--------------------------ccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNE--------------------------HHR 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~---~~~~~~~~~~i~~~~id~~~~~--------------------------~~~ 500 (586)
.+++++|+||++||++|+.+.|.+.+ +.+.+++ .++.++.++.+.+. ...
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999998 8888765 35777777766432 227
Q ss_pred CCCCcCcEEEEEe-CCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 501 AKSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 501 ~~i~~~Pt~~~~~-~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
|++.++|+++++. +|+.+ + +..+.++|.++|++...
T Consensus 105 ~~v~~~P~~~lid~~G~i~-----~-~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRVI-----L-KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBEE-----E-CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCEE-----e-cCCCHHHHHHHHHHHcc
Confidence 8999999999995 55543 3 55789999999987653
No 314
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.06 E-value=3e-10 Score=90.56 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=66.0
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC--CcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCC
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEYDVQGFPTIYFFVDGQHKAYNGGRT 187 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~ 187 (586)
..+.++.||++||++|+.+.|.|.+++ . ++.|..||++ +++++.++|+ .++|++ +.+|+.. ..|..+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~---~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~ 83 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D---RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVN 83 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S---SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCC
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h---CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCC
Confidence 457899999999999999999987654 2 3889999998 7789999999 999986 4578554 467789
Q ss_pred HHHHHHHHHHhcC
Q 007882 188 KDAIVTWIKKKIG 200 (586)
Q Consensus 188 ~~~l~~~i~~~~~ 200 (586)
.+.|.++|.+.+.
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 315
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.05 E-value=4.6e-10 Score=98.26 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=72.7
Q ss_pred cCCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcCCCcEEEEEEeCCc---------------------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTT--------------------------------- 495 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~~~~i~~~~id~~~--------------------------------- 495 (586)
.++++||.||++||++|+.. .|.+.++.+++++. ++.++.++.+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 47899999999999999996 99999999999753 57788777531
Q ss_pred --cccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 496 --NEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 496 --~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
.....|++.++|+++++ ++|+.+. ++.|..+.+.|.+.|++.+..
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRA---HHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEE---EEeCCCCHHHHHHHHHHHhcc
Confidence 12356899999999999 5676654 677889999999999987653
No 316
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.04 E-value=7.2e-10 Score=95.14 Aligned_cols=84 Identities=12% Similarity=0.195 Sum_probs=65.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHH---HHHHhcCCCcEEEEEEeCCccc--------------------------ccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNE--------------------------HHR 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~---~~~~~~~~~~i~~~~id~~~~~--------------------------~~~ 500 (586)
.++++||+||++||++|+.+.|.+.+ +.+.+++ .++.++.++.+.+. ...
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA-KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 36899999999999999999999999 9999876 46778878776541 346
Q ss_pred CCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHh
Q 007882 501 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 539 (586)
Q Consensus 501 ~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~ 539 (586)
|++.++|+++++.....+ .+.+ .+.++|.+||++
T Consensus 109 ~~v~~~P~~~lid~~G~i----~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTV----LLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp SCCTTCSEEEEECTTCBE----EEEE-ECHHHHHHHHHC
T ss_pred cCCCcCCeEEEECCCCcE----EecC-CCHHHHHHHHhC
Confidence 889999999999544433 2333 357889888864
No 317
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.03 E-value=3.7e-10 Score=98.40 Aligned_cols=86 Identities=20% Similarity=0.240 Sum_probs=69.5
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC---------------------------c--cccccCC
Q 007882 452 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT---------------------------T--NEHHRAK 502 (586)
Q Consensus 452 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~---------------------------~--~~~~~~~ 502 (586)
++++|.||++||++|+.+.|.+.++.+.+ + +.++.|+.+ . .....|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~---v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G---VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C---CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C---CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999998 3 445555551 1 1136789
Q ss_pred CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCCC
Q 007882 503 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 544 (586)
Q Consensus 503 i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 544 (586)
+.++|+++++ ++|+.+. ++.|..+.++|.++|+++....
T Consensus 107 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVA---LFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp BCSSCEEEEECTTSEEEE---EEESBCCHHHHHHHHHHTTCCC
T ss_pred CCcccEEEEECCCCCEEE---EEcCCCCHHHHHHHHHhccCcc
Confidence 9999998888 6676654 7788899999999999987644
No 318
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.03 E-value=5.4e-10 Score=97.22 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=76.5
Q ss_pred EeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC-----------------------
Q 007882 438 VVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT----------------------- 494 (586)
Q Consensus 438 l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~----------------------- 494 (586)
+++..+.-.-. .++++||.||++||++|+.+.|.+.++++.+... ++.++.++.+
T Consensus 16 ~~g~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d 93 (153)
T 2l5o_A 16 LHGKTVSNADL-QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYD 93 (153)
T ss_dssp TTSCEEEHHHH-TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCccHHHh-CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcC
Confidence 34444433222 5789999999999999999999999999998763 4666665532
Q ss_pred --ccccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 495 --TNEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 495 --~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
......|++.++|+++++ ++|+.+. ++.|..+.+.|.++|++.+..
T Consensus 94 ~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 94 ADKAVGQAFGTQVYPTSVLIGKKGEILK---TYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp SSCHHHHHHTCCSSSEEEEECSSSCCCE---EEESSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHcCCCccCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHHh
Confidence 112356899999999999 6777654 688889999999999887643
No 319
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.03 E-value=5.7e-10 Score=96.98 Aligned_cols=90 Identities=16% Similarity=0.354 Sum_probs=74.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-------------------------cccCCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------HHRAKSD 504 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-------------------------~~~~~i~ 504 (586)
.+++++|.||++||++|+.+.|.+.++.+.+.+ .++.++.++.+.+. ...|++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG-KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT-SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc-CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 468999999999999999999999999999875 35778888766542 2468999
Q ss_pred cCcEEEEEe-CCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 505 GFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 505 ~~Pt~~~~~-~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
++|+++++. +|+.+. ++.|..+.+.|.++|++....
T Consensus 108 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 108 GIPRFILLDRDGKIIS---ANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp SSCCEEEECTTSCEEE---SSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCeEEE---ccCCCCCHHHHHHHHHHHhcc
Confidence 999999996 677664 567888889999999987653
No 320
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.03 E-value=5.6e-10 Score=96.43 Aligned_cols=86 Identities=17% Similarity=0.264 Sum_probs=67.9
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCCCcEEEEEEeCCccc---------------------------cccC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE---------------------------HHRA 501 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~-~~~~~i~~~~id~~~~~---------------------------~~~~ 501 (586)
.+++++|.||++||++|+.+.|.+.++.+.+ .+ .++.++.++.+... ...|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 4789999999999999999999999999998 54 35777777766422 3578
Q ss_pred CCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 502 KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 502 ~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++.++|+++++ ++|+.+. ++. +.+.+.++|++.+.
T Consensus 111 ~v~~~P~~~lid~~G~i~~---~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKILA---RDI---QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSSSEEEEECTTSBEEE---ESC---CHHHHHHHHHHHC-
T ss_pred CCCCcCEEEEECCCCeEEE---ecC---CHHHHHHHHHHHHc
Confidence 99999999999 5666542 222 88889999988764
No 321
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.02 E-value=8.2e-10 Score=96.88 Aligned_cols=101 Identities=16% Similarity=0.194 Sum_probs=77.5
Q ss_pred EeCcchhHHhhccCCcEEEEEeCCCChhhhh-hhHHHHHHHHHhcCCCcEEEEEEeCC----------------------
Q 007882 438 VVGNNFDEIVLDESKDVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIVIAKMDGT---------------------- 494 (586)
Q Consensus 438 l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~-~~~~~~~~~~~~~~~~~i~~~~id~~---------------------- 494 (586)
++++.+.-.-. .++++||.||++||++|+. +.|.+.++.+.+++. ++.++.++.+
T Consensus 18 ~~g~~~~l~~~-~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (160)
T 3lor_A 18 VNHEGLSNEDL-RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK 95 (160)
T ss_dssp SSSCCCCHHHH-TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC
T ss_pred cCCCccCHHHh-CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCC
Confidence 44554443322 4789999999999999999 699999999999763 5777777652
Q ss_pred --------cc------ccccCCCCcCcEEEEEe-CCCcccCccccccccCHHHHHHHHHhcCCC
Q 007882 495 --------TN------EHHRAKSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNASI 543 (586)
Q Consensus 495 --------~~------~~~~~~i~~~Pt~~~~~-~g~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 543 (586)
.. ....|++.++|+++++. +|+.+. ++.|..+.+.|.++|++.+..
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQ---VQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHHHHHHHTC
T ss_pred CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEE---EecCcCCHHHHHHHHHHHHhc
Confidence 11 23568999999999994 676654 777989999999999887643
No 322
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.02 E-value=1.6e-09 Score=96.52 Aligned_cols=92 Identities=21% Similarity=0.320 Sum_probs=70.7
Q ss_pred CCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---cH-------------------------HH
Q 007882 109 NNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDATE---EN-------------------------EL 159 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---~~-------------------------~l 159 (586)
.++++||+||++||+ +|+.++|.+.++++++++.+.++.++.|+++. .. .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 588999999999999 99999999999999998754458888888762 11 12
Q ss_pred HHH----------------cCCCCCcEEEEEe-CCe-eeeecCCC--CHHHHHHHHHHhcC
Q 007882 160 AHE----------------YDVQGFPTIYFFV-DGQ-HKAYNGGR--TKDAIVTWIKKKIG 200 (586)
Q Consensus 160 ~~~----------------~~i~~~Pt~~~~~-~g~-~~~~~g~~--~~~~l~~~i~~~~~ 200 (586)
.+. +++.+.|+++++. +|+ ...+.|.. +.+.|.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 222 2356789999985 884 45677875 47889999988764
No 323
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.01 E-value=8.9e-10 Score=100.54 Aligned_cols=91 Identities=18% Similarity=0.223 Sum_probs=66.9
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhhcC-CCceEEEEEeCCC----------------------------cHH
Q 007882 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA-NESVVLAKVDATE----------------------------ENE 158 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~-C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~----------------------------~~~ 158 (586)
.|+++||+||++||++ |+.++|.|.++++++... +.++.++.|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5889999999999998 999999999999888753 2357788887762 125
Q ss_pred HHHHcCCC-CCc---------------EEEEEe-CCe-eeeecCCCCHHHHHHHHHHhc
Q 007882 159 LAHEYDVQ-GFP---------------TIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 159 l~~~~~i~-~~P---------------t~~~~~-~g~-~~~~~g~~~~~~l~~~i~~~~ 199 (586)
+++.|+|. +.| +++++. +|+ ...+.|..+.+.+.+.|.+.+
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 77788886 444 677875 884 456777777777777776655
No 324
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.01 E-value=2e-10 Score=91.65 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=61.3
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCH
Q 007882 453 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 530 (586)
Q Consensus 453 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~ 530 (586)
..|+.||++||++|+.+.|.+++++..+. +.+..+|++.+. ..+|+++ +|++++|.+|+.+ ..|..+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-----~~g~~~~ 99 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-----CHYFLDS 99 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-----ECSSCCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-----EecCCCH
Confidence 67999999999999999999999998853 556666666543 4688987 9999999888764 3477888
Q ss_pred HHHHHHH
Q 007882 531 VALYKFL 537 (586)
Q Consensus 531 ~~l~~~i 537 (586)
+.|.+||
T Consensus 100 ~~L~~~L 106 (107)
T 2fgx_A 100 DVIGAYL 106 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8999887
No 325
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.01 E-value=2.2e-09 Score=98.48 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=69.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHH------HcCCC-----
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAH------EYDVQ----- 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~------~~~i~----- 166 (586)
+|+++||+|||+||++|+ ++|.|.++++++++. ++.++.|+|+. . ..+++ ++++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~--g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~ 131 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY--GLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFE 131 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC--CeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEe
Confidence 689999999999999999 999999999999873 58999998752 1 23455 55431
Q ss_pred --------------------------------------------CCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhcC
Q 007882 167 --------------------------------------------GFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 167 --------------------------------------------~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
..|++++++ +| ...+|.|..+.+.|.+.|.+.+.
T Consensus 132 d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 132 KGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGG
T ss_pred eeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 016888885 88 45678888888999998888763
No 326
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.00 E-value=2e-09 Score=97.94 Aligned_cols=89 Identities=13% Similarity=0.268 Sum_probs=71.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.++++||+|| ++||++|+.++|.|.++++++++ .++.++.|+++. ...+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK--LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 5789999999 99999999999999999999976 358888888763 2368
Q ss_pred HHHcCCC------CCcEEEEEe-CCe-eeeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQ-HKAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~-~~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. .+|+++++. +|+ ...+.|. .+.+.+.+.|....
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 8899998 799999995 784 4455563 45678888877653
No 327
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.99 E-value=4.7e-10 Score=99.40 Aligned_cols=101 Identities=21% Similarity=0.277 Sum_probs=70.7
Q ss_pred eEEE--eCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC-------------------
Q 007882 435 VKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG------------------- 493 (586)
Q Consensus 435 v~~l--~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~------------------- 493 (586)
+..+ ++..+.......++++||+||++||++|+.+.|.+.++.+. + -.+..+.+|.
T Consensus 33 l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (168)
T 2b1k_A 33 LESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--G-IRVVGMNYKDDRQKAISWLKELGNPYALS 109 (168)
T ss_dssp EEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CCEEEEEESCCHHHHHHHHHHHCCCCSEE
T ss_pred eecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--C-CEEEEEECCCChHHHHHHHHHcCCCCcee
Confidence 4444 45555544334688999999999999999999999999876 2 2344444321
Q ss_pred ----CccccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 494 ----TTNEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 494 ----~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
.......|++.++|+++++ ++|+.+. ++.|..+.+.+.++|++.+
T Consensus 110 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 110 LFDGDGMLGLDLGVYGAPETFLIDGNGIIRY---RHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp EEETTCHHHHHHTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHTTHHHH
T ss_pred eECcchHHHHHcCccccCEEEEECCCCeEEE---EEeCCCCHHHHHHHHHHHH
Confidence 1222356899999966655 5676654 6778888999988887654
No 328
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.99 E-value=2.1e-10 Score=88.39 Aligned_cols=73 Identities=11% Similarity=0.051 Sum_probs=57.6
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCHHH
Q 007882 455 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVA 532 (586)
Q Consensus 455 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~ 532 (586)
++.||++||++|+.+.|.+++++..+ +..+|++.+. ..+++++ +|++++ .+|+.+ . |..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v----~--g~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL----D--WPFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE----E--SCCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE----e--CCCCHHH
Confidence 78899999999999999999875432 4566666544 4688998 999988 777764 2 7789999
Q ss_pred HHHHHHhcCC
Q 007882 533 LYKFLKKNAS 542 (586)
Q Consensus 533 l~~~i~~~~~ 542 (586)
|.++|.+.+.
T Consensus 68 L~~~l~~~~~ 77 (87)
T 1ttz_A 68 LRAWLDAAPH 77 (87)
T ss_dssp HHHHHHTCC-
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 329
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.99 E-value=4e-10 Score=98.88 Aligned_cols=76 Identities=18% Similarity=0.337 Sum_probs=59.3
Q ss_pred CcchhHHhhccCCcEEEEEeCCCChhhhhhhH-HH--HHHHHHhcCCCcEEEEEEeCCcccc--ccC--------CCCcC
Q 007882 440 GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEP-TY--NKLAKHLRGVDSIVIAKMDGTTNEH--HRA--------KSDGF 506 (586)
Q Consensus 440 ~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~-~~--~~~~~~~~~~~~i~~~~id~~~~~~--~~~--------~i~~~ 506 (586)
.+.|.... ..++++||.|||+||++|+.|.| .| .++++.+.. +++++.+|.+.+.. ..| ++.++
T Consensus 29 ~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 29 EEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp HHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 34566544 56899999999999999999999 33 567776654 68899999987542 445 89999
Q ss_pred cEEEEEe-CCCcc
Q 007882 507 PTILFFP-AGNKS 518 (586)
Q Consensus 507 Pt~~~~~-~g~~~ 518 (586)
|++++|. +|+.+
T Consensus 106 Pt~v~l~~dG~~v 118 (173)
T 3ira_A 106 PLNIIMTPGKKPF 118 (173)
T ss_dssp SEEEEECTTSCEE
T ss_pred cceeeECCCCCce
Confidence 9999995 77765
No 330
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.97 E-value=2.7e-10 Score=98.49 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=71.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc---------------------------ccccCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------------------------EHHRAK 502 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~---------------------------~~~~~~ 502 (586)
.++++||.||++||++|+.+.|.+.++.+.+.+. ++.++.++.+.+ ....|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 5789999999999999999999999999999763 477777776643 234678
Q ss_pred CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 503 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 503 i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+.++|+++++ ++|+.+. ++.|..+.+++++.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~---~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIA---KRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CCSSCEEEEECTTCBEEE---ESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEE---ecCCHHHHHHHHHHHHHHh
Confidence 9999999999 6677654 6678778888888776543
No 331
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.97 E-value=3.3e-09 Score=111.80 Aligned_cols=96 Identities=16% Similarity=0.290 Sum_probs=80.9
Q ss_pred EEeChhhHHHHHh-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEEE
Q 007882 96 VVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (586)
Q Consensus 96 ~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~ 174 (586)
..++++.++.+.. .+++.++.||++||++|+.+.|.+++++..+. ++.+..||.++.++++.+|+|+++||+++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~~~~~~~~i~svPt~~i- 176 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQNEITERNVMGVPAVFV- 176 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhHHHHHHhCCCccCEEEE-
Confidence 4566777777754 35678999999999999999999999988763 59999999999999999999999999977
Q ss_pred eCCeeeeecCCCCHHHHHHHHHHh
Q 007882 175 VDGQHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 175 ~~g~~~~~~g~~~~~~l~~~i~~~ 198 (586)
+|+... .|..+.+.|.+|+...
T Consensus 177 -~g~~~~-~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 -NGKEFG-QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp -TTEEEE-ESCCCHHHHHHHHCCS
T ss_pred -CCEEEe-cCCCCHHHHHHHHhhc
Confidence 886543 3999999999998553
No 332
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.96 E-value=1.6e-09 Score=94.30 Aligned_cols=89 Identities=17% Similarity=0.285 Sum_probs=69.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-------------------------ccccCCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------------------------EHHRAKSD 504 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-------------------------~~~~~~i~ 504 (586)
.++++||.||++||++|+.+.|.+.++.+.+.+ .++.++.++.+.+ ....|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG-KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 578999999999999999999999999999876 3577777777664 22468999
Q ss_pred cCcEEEEE-eCCCcccCcccccccc--CHHHHHHHHHhcCC
Q 007882 505 GFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 542 (586)
Q Consensus 505 ~~Pt~~~~-~~g~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 542 (586)
++|+++++ ++|+.+. ++.|.. +.+++.++|++...
T Consensus 106 ~~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 106 GVPETFVIDRHGVILK---KVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp SBCEEEEECTTSBEEE---EEESCCCTTSHHHHHHHHTC--
T ss_pred CCCeEEEECCCCcEEE---EEcCCCccccHHHHHHHHHHHH
Confidence 99977777 5676653 566644 77899999987543
No 333
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.95 E-value=1.1e-10 Score=105.66 Aligned_cols=112 Identities=14% Similarity=0.263 Sum_probs=78.9
Q ss_pred ccccCccCCCCceEEEecCCCCCcccCC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhh-
Q 007882 371 SEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVL- 448 (586)
Q Consensus 371 ~~~~gi~~~~~p~~~i~~~~~~~~y~~~-~~~t~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~- 448 (586)
.+.+|+.. .|.+++ +.+|... +.++.+++..|++++++ +.++++|+++|..... ...+.+|.....
T Consensus 43 a~~~gi~g--vP~fvi-----ngk~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l~~p 110 (197)
T 1un2_A 43 AADVQLRG--VPAMFV-----NGKYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTLEKP 110 (197)
T ss_dssp HHHTTCCS--SSEEEE-----TTTEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEECSSC
T ss_pred HHHcCCCc--CCEEEE-----cceEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEccCC
Confidence 46778875 788865 1234444 35677889999999998 8899999988865432 345677776542
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCcc
Q 007882 449 DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN 496 (586)
Q Consensus 449 ~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~ 496 (586)
.+.+++||.||+.||+||+.+.|.+ +++++.+.+ ++.|..++...+
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~ 159 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFM 159 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSS
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcC
Confidence 3467899999999999999999999 999988865 577888887654
No 334
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.95 E-value=2.9e-09 Score=97.31 Aligned_cols=89 Identities=11% Similarity=0.219 Sum_probs=71.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.++++||+|| ++||++|+.+.|.|.++++++++ .++.++.|+++. ...+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~--~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD--IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 5789999999 99999999999999999999976 358888888764 3468
Q ss_pred HHHcCCC------CCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. ++|++++++ +|++ ..+.|. .+.+.+.+.|+...
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 8889999 999999995 7843 445553 35688888877654
No 335
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.95 E-value=1.7e-09 Score=93.85 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=71.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc------------------------cccCCCCc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------HHRAKSDG 505 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~------------------------~~~~~i~~ 505 (586)
.++++||+||++||++|+.+.|.+.++.+.+... .+.++.++.+.+. ...|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999863 4777777766432 24589999
Q ss_pred CcEEEEE-eCCCcccCccccccc--cCHHHHHHHHHhcCCCC
Q 007882 506 FPTILFF-PAGNKSFDPINVDVD--RTVVALYKFLKKNASIP 544 (586)
Q Consensus 506 ~Pt~~~~-~~g~~~~~~~~~~g~--~~~~~l~~~i~~~~~~~ 544 (586)
+|+++++ ++|+.+. ++.|. .+.+.|.++|++.....
T Consensus 106 ~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLL---QHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSEEEEECTTSBEEE---EEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCeEEEECCCCCEEE---EEccCCCcCHHHHHHHHHHHHccc
Confidence 9999888 6676654 55663 46689999999887543
No 336
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.95 E-value=8.9e-10 Score=99.11 Aligned_cols=88 Identities=11% Similarity=0.226 Sum_probs=69.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcE------EEEEEeCCc-cc--ccc--------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSI------VIAKMDGTT-NE--HHR-------------------- 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i------~~~~id~~~-~~--~~~-------------------- 500 (586)
.++++||+||++||++|+.+.|.|.++.+.+++. .+ .++.|+.+. +. ...
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4789999999999999999999999999998763 24 788888766 22 222
Q ss_pred -----CCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 501 -----AKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 501 -----~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+++..+|+++++ ++|+.+. ++.|..+.++|.++|++.+
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAA---VFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEE---EECSCCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHH
Confidence 257899977776 6677664 6778889999999998764
No 337
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.94 E-value=2.5e-09 Score=94.33 Aligned_cols=84 Identities=17% Similarity=0.247 Sum_probs=68.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC------------------cc---------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------------------TN--------------- 496 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~------------------~~--------------- 496 (586)
.++++||.||++||++|+.+.|.+.++.+.+. ++.++.++.+ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999987 5777777776 11
Q ss_pred ---------ccccCCCCcCcEEEEEe-CCCcccCcccccccc-CHHHHHHHHHhcC
Q 007882 497 ---------EHHRAKSDGFPTILFFP-AGNKSFDPINVDVDR-TVVALYKFLKKNA 541 (586)
Q Consensus 497 ---------~~~~~~i~~~Pt~~~~~-~g~~~~~~~~~~g~~-~~~~l~~~i~~~~ 541 (586)
....|++.++|+++++. +|+.+ +.|.. +.+.|.++|++..
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~-----~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL-----YAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCEE-----EEEESCCHHHHHHHHHHC-
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcEE-----EeCCCCCHHHHHHHHHHHh
Confidence 23468999999999995 55554 27877 8999999998764
No 338
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.94 E-value=5e-09 Score=92.55 Aligned_cols=87 Identities=14% Similarity=0.220 Sum_probs=67.3
Q ss_pred CCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHcC
Q 007882 109 NNKFVMVEFYAPW-CGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~ 164 (586)
.+++++|+||++| |++|+.++|.+.++++++ . ++.++.|+.+. ...+++.|+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 118 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFG 118 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhC
Confidence 5789999999999 999999999999999998 3 57788887652 246788899
Q ss_pred CCC------CcEEEEEe-CCe-eeeecCC-----CCHHHHHHHHHHhc
Q 007882 165 VQG------FPTIYFFV-DGQ-HKAYNGG-----RTKDAIVTWIKKKI 199 (586)
Q Consensus 165 i~~------~Pt~~~~~-~g~-~~~~~g~-----~~~~~l~~~i~~~~ 199 (586)
+.. .|++++++ +|+ ...+.|. .+.+.+.+.|++.+
T Consensus 119 v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 119 VYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 876 49999996 784 4556542 23477777776653
No 339
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.94 E-value=2.8e-09 Score=96.58 Aligned_cols=89 Identities=20% Similarity=0.305 Sum_probs=70.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
+++++||+|| ++||++|+.++|.|.++++++++ .++.++.|+++. +..+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE--RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 5789999999 99999999999999999999976 258888887753 2368
Q ss_pred HHHcCCC-----CCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ-----GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~-----~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. .+|++++++ +|++ ..+.|. .+.+.+.+.|....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 8899999 899999995 8843 455563 34677777776543
No 340
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.93 E-value=4e-09 Score=97.06 Aligned_cols=89 Identities=17% Similarity=0.300 Sum_probs=70.7
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
+++++||+|| ++||++|+.++|.|.++++++++ .++.++.|+++. ...+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE--RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH--TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 5789999999 99999999999999999999976 358888887653 2468
Q ss_pred HHHcCCC-----CCcEEEEEe-CCe-eeeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ-----GFPTIYFFV-DGQ-HKAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~-----~~Pt~~~~~-~g~-~~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. .+|++++++ +|+ ...+.|. .+.+.+.+.|+...
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8899998 899999996 784 3455553 34778888777654
No 341
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.93 E-value=3.7e-09 Score=97.82 Aligned_cols=89 Identities=13% Similarity=0.302 Sum_probs=71.8
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.++++||+|| ++||++|+.++|.|.++++++.+ .++.++.|+++. ...+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD--VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 4789999999 99999999999999999999976 358888887753 2468
Q ss_pred HHHcCCC------CCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. .+|++++++ +|++ ..+.|. .+.+.+.+.|+...
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8899999 999999995 7843 445554 45688888887655
No 342
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.92 E-value=2.5e-09 Score=93.56 Aligned_cols=89 Identities=19% Similarity=0.380 Sum_probs=70.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------------------cccccCCCCcCcE
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------NEHHRAKSDGFPT 508 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------------------~~~~~~~i~~~Pt 508 (586)
.+++++|.||++||++|+.+.|.+.++.+.+.. .++.++.++.+. .....|++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK-GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST-TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc-CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 478999999999999999999999999999875 368888888765 1235789999999
Q ss_pred EEEE-eCCCcccCcccccc--ccCHHHHHHHHHhcCC
Q 007882 509 ILFF-PAGNKSFDPINVDV--DRTVVALYKFLKKNAS 542 (586)
Q Consensus 509 ~~~~-~~g~~~~~~~~~~g--~~~~~~l~~~i~~~~~ 542 (586)
++++ ++|+.+. ++.| ..+.+++++.++++..
T Consensus 119 ~~lid~~G~i~~---~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 119 TFIVDRKGIIRQ---RVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEECTTSBEEE---EEESCCCTTSHHHHHHHHTTC-
T ss_pred EEEEcCCCCEEE---EEeCCCccchHHHHHHHHhhcc
Confidence 8888 5666653 5666 4567888888877653
No 343
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.91 E-value=5.2e-09 Score=95.55 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=67.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-------c----HHHHH------HcCCC-----
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAH------EYDVQ----- 166 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~l~~------~~~i~----- 166 (586)
+|+++||+|||+||++| .++|.|.++++++++. ++.++.|+|+. . ...++ ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~--g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~ 113 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF--GLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFE 113 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG--TEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC--CEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeee
Confidence 68999999999999999 7899999999999873 48899998752 1 23444 44431
Q ss_pred --------------------------------------------CCcEEEEEe-CC-eeeeecCCCCHHHHHHHHHHhc
Q 007882 167 --------------------------------------------GFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 167 --------------------------------------------~~Pt~~~~~-~g-~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
..|++++++ +| ...+|.|..+.+.|...|.+.+
T Consensus 114 d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 114 KGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp CCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred EeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 116888885 88 4567888888888988888776
No 344
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.90 E-value=7.1e-09 Score=96.11 Aligned_cols=87 Identities=15% Similarity=0.340 Sum_probs=67.8
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.++++||+||+ +||++|+.++|.|.++++++++. ++.++.|+++. +..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 58899999997 99999999999999999999863 48888888763 2257
Q ss_pred HHHcCCC------CCcEEEEEe-CCe-eeeecCCC----CHHHHHHHHHH
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKK 197 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~-~~~~~g~~----~~~~l~~~i~~ 197 (586)
++.|++. .+|++++++ +|+ ...+.|.. ..+.+.+.|..
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7889998 899999996 884 44555543 34566655544
No 345
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.90 E-value=1.7e-09 Score=94.42 Aligned_cols=93 Identities=17% Similarity=0.293 Sum_probs=68.7
Q ss_pred cchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-------------------------
Q 007882 441 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------------------------- 495 (586)
Q Consensus 441 ~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~------------------------- 495 (586)
+.+..... .+++++|+||++||++|+.+.|.+.++.+. .++.++.++.+.
T Consensus 33 ~~~~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (156)
T 1kng_A 33 PGLDPAAF-KGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANG 107 (156)
T ss_dssp CCBCGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTS
T ss_pred ceechHHh-CCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchh
Confidence 45554433 378999999999999999999999998765 235555555432
Q ss_pred cccccCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 496 NEHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 496 ~~~~~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
.....|++.++|+++++ ++|+.+. ++.|..+.+.|.++|++.+
T Consensus 108 ~~~~~~~v~~~P~~~~id~~G~i~~---~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 108 RASIEWGVYGVPETFVVGREGTIVY---KLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHHHHTTCCSSCEEEEECTTSBEEE---EEESCCCHHHHHHTHHHHH
T ss_pred HHHHhcCcCccCeEEEEcCCCCEEE---EEeCCCCHHHHHHHHHHHH
Confidence 11246899999977777 6776654 6778889999999887654
No 346
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.89 E-value=1.7e-08 Score=106.21 Aligned_cols=176 Identities=13% Similarity=0.087 Sum_probs=119.2
Q ss_pred ccEEEEEEecc-chhhHHHHHHHHHHhccCceEEEEEECCCcccccccccccCccCCCCceEEEecCCCCCcccCCCCCC
Q 007882 324 KNQLLLFAVSN-DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 402 (586)
Q Consensus 324 ~~~l~~~~~~~-~~~~~~~~l~~lA~~~~~~~~f~~vd~~~~~~~~~~~~~~gi~~~~~p~~~i~~~~~~~~y~~~~~~t 402 (586)
+..+.+|.+.. .+.+..+.++++|.. .+++.+...+ . . ....|.+.+...+......|-+-..
T Consensus 20 ~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~-~------------~~~~p~~~~~~~~~~~~i~f~g~p~ 83 (521)
T 1hyu_A 20 PVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--T-L------------PVRKPSFLITNPGSQQGPRFAGSPL 83 (521)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--T-S------------SSCSSEEEEECTTCCCSCEEESCCC
T ss_pred CEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--C-c------------ccCCCEEEEecCCCcceEEEeccCc
Confidence 44455665553 366677777777653 4567653211 1 0 0346888887555444455566566
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC
Q 007882 403 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 482 (586)
Q Consensus 403 ~e~i~~fi~~~~~gkl~~~~ks~~~~~~~~~~v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~ 482 (586)
-..+..|+..++.=.-. ...++.+.++..........++.||++||++|+.+.|.+++++..+.
T Consensus 84 g~e~~s~~~~l~~~~~~---------------~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~- 147 (521)
T 1hyu_A 84 GHEFTSLVLALLWTGGH---------------PSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP- 147 (521)
T ss_dssp GGGHHHHHHHHHHHTTC---------------CCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-
T ss_pred chhHHHHHHHHHhhcCC---------------CCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-
Confidence 67777888777552111 12344455555433345667999999999999999999999998864
Q ss_pred CCcEEEEEEeCCccc--cccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhc
Q 007882 483 VDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 483 ~~~i~~~~id~~~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
++.+..+|.+.+. ..+++|+++|++++ +|+.+ ..|..+.++|.+++...
T Consensus 148 --~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~-----~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 --RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF-----GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE-----EESCCCHHHHHHHHCCS
T ss_pred --ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE-----ecCCCCHHHHHHHHhhc
Confidence 5888888877655 47899999999977 77664 34888999999998654
No 347
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.88 E-value=4e-09 Score=81.39 Aligned_cols=76 Identities=28% Similarity=0.431 Sum_probs=59.6
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH----HHHHHcC--CCCCcEEEEEeCCeeeeecCCC
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----ELAHEYD--VQGFPTIYFFVDGQHKAYNGGR 186 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~--i~~~Pt~~~~~~g~~~~~~g~~ 186 (586)
.++.||++||++|+...+.|.+++.++.+ +.+..+|++.++ ++.++++ +.++|++ +.+|..+ |.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~----i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i---~~- 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD----FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI---GG- 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS----CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE---ES-
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC----ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE---EC-
Confidence 37789999999999999999999887543 888999987653 7899999 9999998 4478543 22
Q ss_pred CHHHHHHHHHHhc
Q 007882 187 TKDAIVTWIKKKI 199 (586)
Q Consensus 187 ~~~~l~~~i~~~~ 199 (586)
.+.|.+++.+.+
T Consensus 72 -~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 -YTDFAAWVKENL 83 (85)
T ss_dssp -SHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc
Confidence 267888776643
No 348
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.88 E-value=5.3e-09 Score=90.82 Aligned_cols=86 Identities=20% Similarity=0.286 Sum_probs=65.9
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-------------------------c--cccCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------------------------E--HHRAK 502 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-------------------------~--~~~~~ 502 (586)
.+++++|.||++||++|+.+.|.+.++.+.+.+. ++.++.++++.. . ...|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4789999999999999999999999999998763 577777777652 1 25789
Q ss_pred CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 503 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 503 i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+.++|+++++ ++|+.+. ++. +.++|.++|++...
T Consensus 107 v~~~P~~~lid~~G~i~~---~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVA---KEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CCSSCEEEEECTTSEEEE---ECC---CTTHHHHHHHHHHT
T ss_pred CCcCCeEEEECCCCeEEE---eeC---CHHHHHHHHHHHHh
Confidence 9999999999 6676653 322 34567777766544
No 349
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.88 E-value=6.5e-09 Score=91.44 Aligned_cols=88 Identities=17% Similarity=0.326 Sum_probs=65.9
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------cHHHHHHcCCC
Q 007882 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------ENELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~i~ 166 (586)
.|++++|+||+ +||++|..++|.+.++++++++. ++.++.|.++. ...+++.|++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA--GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI 111 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc
Confidence 47899999998 99999999999999999999873 47777777752 22677788887
Q ss_pred C------------CcEEEEEe-CCee-eeecCCCC---HHHHHHHHHHh
Q 007882 167 G------------FPTIYFFV-DGQH-KAYNGGRT---KDAIVTWIKKK 198 (586)
Q Consensus 167 ~------------~Pt~~~~~-~g~~-~~~~g~~~---~~~l~~~i~~~ 198 (586)
. +|++++++ +|++ ..+.|... .+.+.+.|++.
T Consensus 112 ~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 112 KEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 6 99999996 7844 45544332 35555555543
No 350
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.87 E-value=4.2e-09 Score=90.49 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=61.6
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------ 496 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------ 496 (586)
+..++++.+...- -.++++||+||++||++|+.+.|.+.++++.+....++.++.++++..
T Consensus 13 l~~~~g~~~~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPS-LAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHH-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 3444444444322 246899999999999999999999999999998534677777766642
Q ss_pred --------ccccCCCCcCcEEEEEe--CCCcc
Q 007882 497 --------EHHRAKSDGFPTILFFP--AGNKS 518 (586)
Q Consensus 497 --------~~~~~~i~~~Pt~~~~~--~g~~~ 518 (586)
....|++.++|+++++. +|+.+
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 12468999999999996 56654
No 351
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.87 E-value=4e-09 Score=91.61 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=67.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-------------------------cccCCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------HHRAKSD 504 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-------------------------~~~~~i~ 504 (586)
.+++++|.||++||++|+...|.+.++.+.+++. ++.++.++.+... ...|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 4689999999999999999999999999999763 4777777766532 2457899
Q ss_pred cCcEEEEE-eCCCcccCccccccccCHHHHHHHHHh
Q 007882 505 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKK 539 (586)
Q Consensus 505 ~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~ 539 (586)
++|+++++ ++|+.+. ++.|..+.++...-+.+
T Consensus 113 ~~P~~~lid~~G~i~~---~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSA---RGENIKDLDEAIKKLLE 145 (152)
T ss_dssp SCSEEEEEETTTEEEE---ETTTCSCHHHHHHHHHG
T ss_pred cCceEEEECCCCeEEE---ecCCHHHHHHHHHHHHh
Confidence 99999999 5676654 67788877766655543
No 352
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.85 E-value=6.3e-09 Score=92.68 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=56.8
Q ss_pred CCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------cHHHHHHcCC
Q 007882 109 NNKFVMVEFYAPW-CGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------ENELAHEYDV 165 (586)
Q Consensus 109 ~~~~~lv~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~l~~~~~i 165 (586)
.++++||+||++| |++|+.++|.|.+++++ . ++.++.|+.+. +..+++.|++
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~---~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 117 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S---GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGV 117 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T---TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c---CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCC
Confidence 5789999999999 99999999999999987 3 48888888762 2457888999
Q ss_pred CCC---------cEEEEEe-CCee-eeec
Q 007882 166 QGF---------PTIYFFV-DGQH-KAYN 183 (586)
Q Consensus 166 ~~~---------Pt~~~~~-~g~~-~~~~ 183 (586)
... |++++++ +|++ ..+.
T Consensus 118 ~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 118 TIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp BBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred cccccccCCcccceEEEECCCCeEEEEEE
Confidence 877 8999996 8844 4554
No 353
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.85 E-value=6.2e-09 Score=89.65 Aligned_cols=69 Identities=14% Similarity=0.289 Sum_probs=55.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc--------------------------ccccCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN--------------------------EHHRAKS 503 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~--------------------------~~~~~~i 503 (586)
.+++++|+||++||++|+.+.|.+.++++.+.+..++.++.++++.. ....|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 47899999999999999999999999999998434577777766542 1246899
Q ss_pred CcCcEEEEEe--CCCcc
Q 007882 504 DGFPTILFFP--AGNKS 518 (586)
Q Consensus 504 ~~~Pt~~~~~--~g~~~ 518 (586)
.++|+++++. +|+.+
T Consensus 107 ~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVV 123 (146)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCeEE
Confidence 9999999997 56654
No 354
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.84 E-value=2.3e-08 Score=87.52 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=59.4
Q ss_pred HHHhCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------cHHHHHH
Q 007882 105 DVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------ENELAHE 162 (586)
Q Consensus 105 ~~~~~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~ 162 (586)
+...++++++|+|| ++||++|..++|.|.++++++++.+ .++.|+++. +..+++.
T Consensus 30 ~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 106 (159)
T 2a4v_A 30 KITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGL 106 (159)
T ss_dssp HHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHH
T ss_pred HHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHH
Confidence 33333458899987 9999999999999999999998744 555555542 2367888
Q ss_pred cCCCCCc------EEEEEeCCee-eeecCCCCHH
Q 007882 163 YDVQGFP------TIYFFVDGQH-KAYNGGRTKD 189 (586)
Q Consensus 163 ~~i~~~P------t~~~~~~g~~-~~~~g~~~~~ 189 (586)
|++...| +++++++|++ ..+.|.....
T Consensus 107 ~gv~~~p~~g~~~~~~li~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 107 LGAKKTPLSGSIRSHFIFVDGKLKFKRVKISPEV 140 (159)
T ss_dssp HTCBSSSSSCBCCEEEEEETTEEEEEEESCCHHH
T ss_pred hCCcccccCCccceEEEEcCCEEEEEEccCCccc
Confidence 9999988 4444488954 5666755443
No 355
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.83 E-value=4.6e-09 Score=103.62 Aligned_cols=88 Identities=11% Similarity=0.159 Sum_probs=71.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-----------------------------ccccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------------NEHHR 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-----------------------------~~~~~ 500 (586)
.++++||+||++||++|+.+.|.|.++++++++ .++.++.|+++. .....
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~-~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD-SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc-CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 478999999999999999999999999999976 358888887642 12246
Q ss_pred CCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 501 AKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 501 ~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|+|..+|+++++ ++|+.+. ++.|..+.++|.++|++.+
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~---~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRH---IKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TTCCEESEEEEECTTSBEEE---EEESBCCHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEE---EEcCCCCHHHHHHHHHHHH
Confidence 899999999999 6676654 6778888999999988765
No 356
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.82 E-value=1.4e-08 Score=89.87 Aligned_cols=94 Identities=12% Similarity=0.113 Sum_probs=71.1
Q ss_pred CCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC--c-----------------------------
Q 007882 109 NNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDATE--E----------------------------- 156 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~----------------------------- 156 (586)
.|++++|+||++||+ +|..++|.+.++++++...+.++.++.|.++. .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 489999999999997 69999999999999997544467777776641 1
Q ss_pred HHHHHHcCC---------CCCcEEEEEe-CCee-eeecCC-CCHHHHHHHHHHhcCCC
Q 007882 157 NELAHEYDV---------QGFPTIYFFV-DGQH-KAYNGG-RTKDAIVTWIKKKIGPG 202 (586)
Q Consensus 157 ~~l~~~~~i---------~~~Pt~~~~~-~g~~-~~~~g~-~~~~~l~~~i~~~~~~~ 202 (586)
..+++.||+ ...|++++++ +|++ ..|.|. .+.+.+.+.|.+.....
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 145555553 3568899996 8854 456775 67899999998887654
No 357
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.82 E-value=7.8e-09 Score=88.75 Aligned_cols=69 Identities=20% Similarity=0.400 Sum_probs=55.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--------------------------cccCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------HHRAKS 503 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--------------------------~~~~~i 503 (586)
.+++++|+||++||++|+.+.|.+.++++.+++..++.++.++++.+. ...|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 478999999999999999999999999999884345777777665421 246799
Q ss_pred CcCcEEEEEe--CCCcc
Q 007882 504 DGFPTILFFP--AGNKS 518 (586)
Q Consensus 504 ~~~Pt~~~~~--~g~~~ 518 (586)
.++|+++++. +|+.+
T Consensus 107 ~~~Pt~~lid~~~G~i~ 123 (144)
T 1o73_A 107 ESIPTLITINADTGAII 123 (144)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCeEE
Confidence 9999999998 56654
No 358
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.82 E-value=1.6e-08 Score=93.34 Aligned_cols=89 Identities=15% Similarity=0.308 Sum_probs=68.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------------HHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~l 159 (586)
+++++||+|| ++||++|+.++|.|.++++++++. ++.++.|+++.. ..+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK--NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 5789999999 999999999999999999999763 577777776531 146
Q ss_pred HHHcCC-----CCCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDV-----QGFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i-----~~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++ ..+|++++++ +|++ ..+.|. .+.+.+.+.|++..
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 667787 3689999996 7843 445453 46778888877654
No 359
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.81 E-value=1.1e-08 Score=90.12 Aligned_cols=69 Identities=20% Similarity=0.424 Sum_probs=55.4
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--------------------------cccCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------HHRAKS 503 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--------------------------~~~~~i 503 (586)
.++++||+||++||++|+.+.|.+.++++.++...++.++.|+.+... ...|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 478999999999999999999999999999986445666666655431 246899
Q ss_pred CcCcEEEEEeC--CCcc
Q 007882 504 DGFPTILFFPA--GNKS 518 (586)
Q Consensus 504 ~~~Pt~~~~~~--g~~~ 518 (586)
.++|+++++.. |+.+
T Consensus 127 ~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTV 143 (165)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEeCCCCEEE
Confidence 99999999974 5554
No 360
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.81 E-value=9.8e-09 Score=88.16 Aligned_cols=95 Identities=14% Similarity=0.161 Sum_probs=70.6
Q ss_pred cchhHHh---hccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCcccc----ccCCCCcCcEEE
Q 007882 441 NNFDEIV---LDESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH----HRAKSDGFPTIL 510 (586)
Q Consensus 441 ~~f~~~v---~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~i~~~~id~~~~~~----~~~~i~~~Pt~~ 510 (586)
.+|++.+ ...+++++|+||++||.+|+.|.... .++++.++. +++++.+|.+.... ..|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 4666655 34589999999999999999997655 455555533 58999999976443 578999999999
Q ss_pred EEeC--CCcccCccccccccCHHHHHHHHHhcC
Q 007882 511 FFPA--GNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 511 ~~~~--g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
|+.. |+.+. .+.| .+.++++++|.+.+
T Consensus 107 fld~~~G~~l~---~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 107 ILDPRTGQKLV---EWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EECTTTCCCCE---EESS-CCHHHHHHHHHHHH
T ss_pred EEeCCCCcEee---ecCC-CCHHHHHHHHHHHH
Confidence 9954 55553 3445 89999888887654
No 361
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.80 E-value=9.4e-09 Score=94.83 Aligned_cols=81 Identities=17% Similarity=0.363 Sum_probs=61.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEe------------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD------------------------------------ 152 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd------------------------------------ 152 (586)
+++++++.||++||++|+++.|.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 158 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV 158 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCC
Confidence 468899999999999999999999988652 23333322
Q ss_pred ----C----CCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHh
Q 007882 153 ----A----TEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 153 ----~----~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~ 198 (586)
| +.+..+++++||+++||+ ++.+|. .+.|..+.+.|.++|.+.
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 159 APASCDVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHHHHHHHHHHh
Confidence 1 123467889999999998 456774 457888999999998765
No 362
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.80 E-value=4e-09 Score=92.04 Aligned_cols=87 Identities=16% Similarity=0.337 Sum_probs=58.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---------------------HHHHHHcCCC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---------------------NELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---------------------~~l~~~~~i~ 166 (586)
+|++++|+|| ++||++|+.++|.|.+++++++.. ++.++.|+.+.. ..+++.||+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~--~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~ 106 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV--NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVA 106 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC--SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc--CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCc
Confidence 5889999999 999999999999999999988773 477777776532 2567777763
Q ss_pred -----------CCcEEEEEe-CCee-eeec-----CCCCHHHHHHHHHH
Q 007882 167 -----------GFPTIYFFV-DGQH-KAYN-----GGRTKDAIVTWIKK 197 (586)
Q Consensus 167 -----------~~Pt~~~~~-~g~~-~~~~-----g~~~~~~l~~~i~~ 197 (586)
..|++++++ +|++ ..+. +..+.+.+.+.|+.
T Consensus 107 ~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 107 WEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 468888986 7843 3333 34466777777754
No 363
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.80 E-value=4e-08 Score=88.33 Aligned_cols=89 Identities=13% Similarity=0.151 Sum_probs=67.4
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-------------------------HHHHHH
Q 007882 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------------------------NELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------~~l~~~ 162 (586)
.|+++||+||+ +||++|..++|.|.++++++++. ++.++.|.++.. ..+++.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL--GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 57899999995 99999999999999999999863 578888876532 145566
Q ss_pred cCCC------CCcEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHhc
Q 007882 163 YDVQ------GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKI 199 (586)
Q Consensus 163 ~~i~------~~Pt~~~~~-~g~-~~~~~g~~----~~~~l~~~i~~~~ 199 (586)
|++. ..|++++++ +|+ ...+.|.. +.+.+.+.|+...
T Consensus 107 ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6665 369999996 884 45566543 5778888777654
No 364
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.79 E-value=2.4e-08 Score=89.18 Aligned_cols=87 Identities=11% Similarity=0.205 Sum_probs=64.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---------------------HHHHHHcCCC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---------------------NELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---------------------~~l~~~~~i~ 166 (586)
.+++++|+|| ++||++|..++|.|.++++++++. ++.++.|.++.. ..+++.|++.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~--~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI--NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT--TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 5789999998 999999999999999999999873 477888877532 2567778875
Q ss_pred C------------CcEEEEEe-CCee-eeecCCC---CHHHHHHHHHH
Q 007882 167 G------------FPTIYFFV-DGQH-KAYNGGR---TKDAIVTWIKK 197 (586)
Q Consensus 167 ~------------~Pt~~~~~-~g~~-~~~~g~~---~~~~l~~~i~~ 197 (586)
. .|++++++ +|++ ..+.+.. ..+.+.+.|++
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp EEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 3 68899996 8844 4554432 33555555554
No 365
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.79 E-value=2.2e-08 Score=89.21 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=65.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC-----------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----------------------------------- 153 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------------------- 153 (586)
.++++|+.||.+||++|+.+.|.+.++.+++.+ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN----VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC----EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 478999999999999999999999999887533 55544442
Q ss_pred ----------------------------------CCcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHhc
Q 007882 154 ----------------------------------TEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 154 ----------------------------------~~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
..+..+++++||.++||+++ +|+ .+.|..+.+.|.++|.+.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHHHHHHHHHHHH
Confidence 12235677899999999876 775 5679999999999988764
No 366
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.78 E-value=9e-09 Score=91.77 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=64.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-------------------------cccccCCCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------------NEHHRAKSD 504 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-------------------------~~~~~~~i~ 504 (586)
.++++||+||++||++|+.+.|.+.++.++ + +.++.|+.+. .....|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~---v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G---VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T---CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C---CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 478999999999999999999999999886 2 4444444211 112457899
Q ss_pred cCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 505 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 505 ~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++|+++++ ++|+.+. ++.|..+.+.+.++|.+.+.
T Consensus 132 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRH---KIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBEEE---EEESCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeEEE---EEcCCCCHHHHHHHHHHHHH
Confidence 99988887 5666654 67788899998888877653
No 367
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.76 E-value=1.4e-08 Score=87.06 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=62.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc----------------------------cccC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------------HHRA 501 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~----------------------------~~~~ 501 (586)
.+++++|.||++||++|+.+.|.+.++.+++++. ++.++.|+.+.+. ...|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 4689999999999999999999999999998763 5777777665321 1347
Q ss_pred CCCcCcEEEEEe-CCCcccCccccccccCHHHHHHHHH
Q 007882 502 KSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLK 538 (586)
Q Consensus 502 ~i~~~Pt~~~~~-~g~~~~~~~~~~g~~~~~~l~~~i~ 538 (586)
++.++|+++++. +|+.+. .+ .+.+++.++|+
T Consensus 110 ~v~~~P~~~lid~~G~i~~-----~~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVIIA-----AN-VTPEKLTEILK 141 (143)
T ss_dssp TGGGCCCEEEECTTSBEEE-----ES-CCHHHHHHHHT
T ss_pred CCCCCCcEEEECCCCEEEE-----cc-CCHHHHHHHHH
Confidence 899999999886 565542 22 34667777764
No 368
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.76 E-value=1.4e-09 Score=89.64 Aligned_cols=79 Identities=19% Similarity=0.348 Sum_probs=58.8
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-------ccccCCCCcCcEEEEEeCCCcccCccc
Q 007882 451 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------EHHRAKSDGFPTILFFPAGNKSFDPIN 523 (586)
Q Consensus 451 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-------~~~~~~i~~~Pt~~~~~~g~~~~~~~~ 523 (586)
++.+++ ||++||++|+.+.|.|++++. .+.++.+|.+.+ ....+++.++|++ |.+|+.+. .
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~---~ 86 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIG---G 86 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE---C
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEC---C
Confidence 345655 999999999999999998743 256778877664 2357899999998 55777664 4
Q ss_pred ccccc---CHHHHHHHHHhcC
Q 007882 524 VDVDR---TVVALYKFLKKNA 541 (586)
Q Consensus 524 ~~g~~---~~~~l~~~i~~~~ 541 (586)
+.|.. +.+.|.++|++..
T Consensus 87 ~~~~~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 87 CDTVVEKHQRNELLPLLQDAA 107 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT
T ss_pred hHHHHHHHhCChHHHHHHHcc
Confidence 45533 6678889998764
No 369
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.76 E-value=3.5e-08 Score=90.55 Aligned_cols=89 Identities=12% Similarity=0.268 Sum_probs=67.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------------HHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~l 159 (586)
.++++||+|| ++||++|..++|.|.++++++++ .++.++.|+++.. ..+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS--INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 5789999999 99999999999999999999976 3577888876531 246
Q ss_pred HHHcCCC------CCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
++.|++. .+|++++++ +|++ ..+.|. .+.+.+.+.|+...
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 6677774 699999996 7843 445453 35677887777653
No 370
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=2.7e-08 Score=85.99 Aligned_cols=84 Identities=12% Similarity=0.181 Sum_probs=64.9
Q ss_pred cCCcEEEEEeCCCChh--hhhhhHHHHHHHHHh-cCCCcEEEEEEeCCccc---------------------------cc
Q 007882 450 ESKDVLLEIYAPWCGH--CQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE---------------------------HH 499 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~--C~~~~~~~~~~~~~~-~~~~~i~~~~id~~~~~---------------------------~~ 499 (586)
.+++++|.||++||++ |+...|.+.++.+++ .+ ..+.++.|+.+... ..
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN-KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC-SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC-CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 4789999999999999 999999999999999 54 35777777766432 24
Q ss_pred cCCCCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 500 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 500 ~~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
.|++.++|+++++ ++|+.+. ++ .+.+.+.+.|++.
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~---~~---~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILA---KN---LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEE---ES---CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEE---cc---CCHHHHHHHHHHH
Confidence 6899999999999 5666543 22 2677777777654
No 371
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.75 E-value=7.5e-09 Score=94.12 Aligned_cols=102 Identities=10% Similarity=0.090 Sum_probs=72.6
Q ss_pred EeCcchhHHhhccCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------------------
Q 007882 438 VVGNNFDEIVLDESK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--------------------- 495 (586)
Q Consensus 438 l~~~~f~~~v~~~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~--------------------- 495 (586)
++++.+.-.-. .++ ++||+||++||++|+...|.+.++.+++.+. ++.++.++.+.
T Consensus 33 ~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~ 110 (196)
T 2ywi_A 33 IDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGY 110 (196)
T ss_dssp TTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTC
T ss_pred CCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCC
Confidence 34444433223 355 5999999999999999999999999998763 46677776632
Q ss_pred ----------cccccCCCCcCcEEEEEe-CCCcccCccc-------cccccCHHHHHHHHHhcCC
Q 007882 496 ----------NEHHRAKSDGFPTILFFP-AGNKSFDPIN-------VDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 496 ----------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~~-------~~g~~~~~~l~~~i~~~~~ 542 (586)
.....|++..+|+++++. +|+.+. ... +.|..+.++|.+.|++.+.
T Consensus 111 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~-~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 111 PFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVY-RGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp CSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEE-EECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEE-ccccCcccccccCccCHHHHHHHHHHHHc
Confidence 112468899999999994 566543 111 4566788999999988764
No 372
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.74 E-value=4.4e-09 Score=92.45 Aligned_cols=95 Identities=15% Similarity=0.264 Sum_probs=69.8
Q ss_pred HHHHHhCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---------------------HHHH
Q 007882 103 FSDVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---------------------NELA 160 (586)
Q Consensus 103 ~~~~~~~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---------------------~~l~ 160 (586)
+.+...+|++++|+|| ++||++|..++|.|.++++++++. ++.++.|+.+.. ..++
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~ 103 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA--NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI 103 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS--SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc--CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH
Confidence 4456667899999988 999999999999999999998873 477777776532 2677
Q ss_pred HHcCCC----------CCcEEEEEe-CCee-eeecC-----CCCHHHHHHHHHHhc
Q 007882 161 HEYDVQ----------GFPTIYFFV-DGQH-KAYNG-----GRTKDAIVTWIKKKI 199 (586)
Q Consensus 161 ~~~~i~----------~~Pt~~~~~-~g~~-~~~~g-----~~~~~~l~~~i~~~~ 199 (586)
+.||+. ..|++++++ +|++ ..+.+ ..+.+.+.+.+++..
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 778873 478899996 7843 34433 346677777776654
No 373
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.73 E-value=4.1e-08 Score=91.71 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=71.2
Q ss_pred HHHHhCCCe-EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------------
Q 007882 104 SDVIENNKF-VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------- 155 (586)
Q Consensus 104 ~~~~~~~~~-~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------- 155 (586)
.+.+..|++ +|++||++||++|..++|.|.+++++++.. ++.++.|+++.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~--gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL--GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC--CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 444435675 566889999999999999999999999873 58888888753
Q ss_pred cHHHHHHcCCC-------CCcEEEEEe-CCee-eeecCC----CCHHHHHHHHHHhc
Q 007882 156 ENELAHEYDVQ-------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (586)
Q Consensus 156 ~~~l~~~~~i~-------~~Pt~~~~~-~g~~-~~~~g~----~~~~~l~~~i~~~~ 199 (586)
...+++.|++. .+|++++++ +|++ ..+.|. ++.+.|.+.|....
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 23578889987 899999996 7843 344443 46788888877653
No 374
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.71 E-value=5.3e-09 Score=99.36 Aligned_cols=73 Identities=19% Similarity=0.221 Sum_probs=56.3
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC------CccccccCCCCcCcEEEEEeCCCcccCccccccc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG------TTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVD 527 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~ 527 (586)
.+|+|||+||++|+++.|.|+++++.+. ++++|. ....+.+++|+++||+++ +|+ ++.|.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~------~~~G~ 265 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------TYTGV 265 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE------EecCC
Confidence 4789999999999999999999986542 444442 122346899999999654 653 37899
Q ss_pred cCHHHHHHHHHhc
Q 007882 528 RTVVALYKFLKKN 540 (586)
Q Consensus 528 ~~~~~l~~~i~~~ 540 (586)
++.++|.+|+.-.
T Consensus 266 ~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 266 RSLEALAVASGYP 278 (291)
T ss_dssp CCHHHHHHHTCCC
T ss_pred CCHHHHHHHHCCC
Confidence 9999999998543
No 375
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.69 E-value=1.4e-08 Score=90.11 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=67.0
Q ss_pred cCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcCC--CcEEEEEEeCCcc--c---------------------------
Q 007882 450 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV--DSIVIAKMDGTTN--E--------------------------- 497 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~~--~~i~~~~id~~~~--~--------------------------- 497 (586)
.++++||+||++||++ |+...|.+.++.+.+... .++.++.|+++.+ .
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4789999999999997 999999999999988743 2577777776532 1
Q ss_pred -cc---------------cCCCCcCcEEEEEeCCCcccCcccccccc--CHHHHHHHHHhc
Q 007882 498 -HH---------------RAKSDGFPTILFFPAGNKSFDPINVDVDR--TVVALYKFLKKN 540 (586)
Q Consensus 498 -~~---------------~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~--~~~~l~~~i~~~ 540 (586)
.. .|++..+|+++++.+|+.+. ++.|.. +.++|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~---~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVL---LYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEE---EECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEE---EECCCCCCCHHHHHHHHHHh
Confidence 01 13457889999999555543 667777 899999999864
No 376
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.69 E-value=1.2e-07 Score=83.25 Aligned_cols=85 Identities=12% Similarity=0.162 Sum_probs=61.8
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----------------------HHHHHHcC
Q 007882 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~l~~~~~ 164 (586)
+|++++|+||+ +||++|..++|.|.++++++ . ++.++.|+++.. ..+++.|+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~---~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 116 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D---NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYA 116 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhC
Confidence 57899999995 99999999999999999888 3 578888876532 24566677
Q ss_pred CC----C--CcEEEEEe-CCe-eeeecCC-----CCHHHHHHHHHH
Q 007882 165 VQ----G--FPTIYFFV-DGQ-HKAYNGG-----RTKDAIVTWIKK 197 (586)
Q Consensus 165 i~----~--~Pt~~~~~-~g~-~~~~~g~-----~~~~~l~~~i~~ 197 (586)
+. + .|++++++ +|+ ...+.|. .+.+.+.+.|++
T Consensus 117 v~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 117 LLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 65 3 39999996 784 4455543 233666666653
No 377
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.69 E-value=3.9e-08 Score=88.68 Aligned_cols=91 Identities=9% Similarity=0.065 Sum_probs=67.9
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-------------------------------ccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------------------NEH 498 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-------------------------------~~~ 498 (586)
.++++||.||++||++|+...|.+.++.+++.+. +.++.++.+. ...
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 4689999999999999999999999999999874 8888887632 112
Q ss_pred ccCCCCcCcEEEEE-eCCCcccCccc-----cccccCHHHHHHHHHhcCC
Q 007882 499 HRAKSDGFPTILFF-PAGNKSFDPIN-----VDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 499 ~~~~i~~~Pt~~~~-~~g~~~~~~~~-----~~g~~~~~~l~~~i~~~~~ 542 (586)
..|++.++|+++++ ++|+.+..... +.|..+.++|.+.|++.+.
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 46899999999999 55655421000 1233467888888887764
No 378
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.68 E-value=1.1e-07 Score=89.48 Aligned_cols=75 Identities=19% Similarity=0.282 Sum_probs=57.8
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhhcCCCce-EEEEEeCCCc----------------------HHHHHHc
Q 007882 109 NNKFVMVEFY-APWCGHCQ-ALAPEYAAAATELKSANESV-VLAKVDATEE----------------------NELAHEY 163 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~-~~~p~~~~~~~~~~~~~~~v-~~~~vd~~~~----------------------~~l~~~~ 163 (586)
+|++++|+|| ++||++|+ .++|.|.++++++++. ++ .++.|+.+.. ..+++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY--GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 5789999999 99999999 9999999999999873 47 7777776531 2567778
Q ss_pred CCC-----------CCcEEEEEeCCe-eeeecCC
Q 007882 164 DVQ-----------GFPTIYFFVDGQ-HKAYNGG 185 (586)
Q Consensus 164 ~i~-----------~~Pt~~~~~~g~-~~~~~g~ 185 (586)
|+. ..|+++++++|+ ...+.|.
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~ 143 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEP 143 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEEETTEEEEEEECC
T ss_pred CceeecccccCcccceeEEEEEECCEEEEEEEec
Confidence 875 358888778884 3455554
No 379
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=2.2e-09 Score=94.04 Aligned_cols=87 Identities=15% Similarity=0.238 Sum_probs=62.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHH-HHHHhcCCCcEEEEEEeCCccc--cccCC------------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNK-LAKHLRGVDSIVIAKMDGTTNE--HHRAK------------------------ 502 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~-~~~~~~~~~~i~~~~id~~~~~--~~~~~------------------------ 502 (586)
.+++++|.||++||++|+.+.|.+.+ +...+....++.++.++.+.+. ...+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46899999999999999999999998 8887762245777777665432 22222
Q ss_pred CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 503 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 503 i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
+.++|+++++ ++|+.+. ++.| .+.+++.+++++.
T Consensus 112 ~~~~P~~~lid~~G~i~~---~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK---LTRL-YNEEEFASLVQQI 146 (159)
Confidence 5679999999 6777763 4445 4555666666543
No 380
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.67 E-value=4.4e-08 Score=89.87 Aligned_cols=83 Identities=19% Similarity=0.291 Sum_probs=61.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEe------------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD------------------------------------ 152 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd------------------------------------ 152 (586)
+++++++.||++||++|+++.|.+.++.+. +..+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999986542 1123332222
Q ss_pred --CC----CcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHh
Q 007882 153 --AT----EENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKK 198 (586)
Q Consensus 153 --~~----~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~ 198 (586)
|. .+..+++++||+++||+++ .+|. .+.|..+.+.|.++|...
T Consensus 161 ~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 161 VKTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHHHHHHHHHhc
Confidence 11 2346788999999999988 7786 567888999999988753
No 381
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.67 E-value=1.1e-07 Score=88.82 Aligned_cols=88 Identities=13% Similarity=0.322 Sum_probs=67.3
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------------HHH
Q 007882 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (586)
Q Consensus 109 ~~~~~lv~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~l 159 (586)
.|+++||+||+ +||++|..++|.|.++++++++. ++.++.|.++.. ..+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~--gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI--NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 57899999999 99999999999999999999863 478888877532 256
Q ss_pred HHHcCCC------CCcEEEEEe-CCee-eeecC----CCCHHHHHHHHHHh
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKK 198 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~~i~~~ 198 (586)
++.|++. .+|++++++ +|++ ..+.+ ..+.+.+.+.|...
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 7778887 689999996 7843 34444 34566777766554
No 382
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.11 E-value=2.6e-09 Score=91.67 Aligned_cols=69 Identities=17% Similarity=0.345 Sum_probs=52.4
Q ss_pred cCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCcc---------------------------cccc
Q 007882 450 ESK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTN---------------------------EHHR 500 (586)
Q Consensus 450 ~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~i~~~~id~~~~---------------------------~~~~ 500 (586)
.++ +++|+||++||++|+.+.|.+.++++.++.. .++.++.++.+.+ ....
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 356 9999999999999999999999999988432 2455555544422 2356
Q ss_pred CCCCcCcEEEEEe-CCCcc
Q 007882 501 AKSDGFPTILFFP-AGNKS 518 (586)
Q Consensus 501 ~~i~~~Pt~~~~~-~g~~~ 518 (586)
|++.++|+++++. +|+.+
T Consensus 104 ~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLI 122 (143)
Confidence 8899999999996 67665
No 383
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.66 E-value=7e-08 Score=86.15 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=53.6
Q ss_pred CCC-eEEEEEECCCChhhhh-hhHHHHHHHHHhhcCCCceE-EEEEeCCCc-----------------------HHHHHH
Q 007882 109 NNK-FVMVEFYAPWCGHCQA-LAPEYAAAATELKSANESVV-LAKVDATEE-----------------------NELAHE 162 (586)
Q Consensus 109 ~~~-~~lv~f~a~wC~~C~~-~~p~~~~~~~~~~~~~~~v~-~~~vd~~~~-----------------------~~l~~~ 162 (586)
+++ ++|+.||++||++|+. ++|.|.++++++++.+ +. ++.|+.+.. ..+++.
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~ 132 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKA 132 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHH
Confidence 455 4566677999999999 7999999999998743 66 777776531 256777
Q ss_pred cCCC-----------CCcEEEEEeCCee-eeecC
Q 007882 163 YDVQ-----------GFPTIYFFVDGQH-KAYNG 184 (586)
Q Consensus 163 ~~i~-----------~~Pt~~~~~~g~~-~~~~g 184 (586)
||+. ..|+++++++|++ ..+.|
T Consensus 133 yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~ 166 (184)
T 3uma_A 133 IGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIE 166 (184)
T ss_dssp TTCEEEEGGGTCEEEECCEEEEEETTEEEEEEEC
T ss_pred cCCceeccccCCcccceeEEEEECCCEEEEEEEe
Confidence 7774 3577888898843 44544
No 384
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.66 E-value=1.6e-07 Score=82.90 Aligned_cols=105 Identities=16% Similarity=0.259 Sum_probs=69.8
Q ss_pred eEEeChhhHHHHHhCCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---HH----HHHHcC--
Q 007882 95 VVVLKERNFSDVIENNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDATEE---NE----LAHEYD-- 164 (586)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~----l~~~~~-- 164 (586)
+...+++.+...--+|+++||+||++||+ +|...++.+.++.+.++..+.++.++.|.++.. ++ .+++++
T Consensus 17 L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~ 96 (170)
T 4hde_A 17 FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTED 96 (170)
T ss_dssp EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSC
T ss_pred EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCC
Confidence 33334443333223689999999999997 799999999999999887666788888876521 11 122221
Q ss_pred ----------------------------------CCCCcEEEEEe-CCee-eeecCC--CCHHHHHHHHHHhc
Q 007882 165 ----------------------------------VQGFPTIYFFV-DGQH-KAYNGG--RTKDAIVTWIKKKI 199 (586)
Q Consensus 165 ----------------------------------i~~~Pt~~~~~-~g~~-~~~~g~--~~~~~l~~~i~~~~ 199 (586)
+.+.|++++++ +|++ ..|.|. ...+.|.+.|++.+
T Consensus 97 ~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 97 TSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred CCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 22347888885 7844 466664 34577777776654
No 385
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.66 E-value=8.2e-08 Score=84.14 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=56.1
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhhcCCCceE-EEEEeCCC-----------------------cHHHHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQ-ALAPEYAAAATELKSANESVV-LAKVDATE-----------------------ENELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~-~~~p~~~~~~~~~~~~~~~v~-~~~vd~~~-----------------------~~~l~~~ 162 (586)
+|++++|+|| ++||++|. .++|.|.++++++++.+ +. ++.|+.+. +..+++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHA 111 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHH
Confidence 5789999999 89999999 99999999999998643 55 66665432 1256777
Q ss_pred cCCC-----------CCcEEEEEeCCee-eeecCC
Q 007882 163 YDVQ-----------GFPTIYFFVDGQH-KAYNGG 185 (586)
Q Consensus 163 ~~i~-----------~~Pt~~~~~~g~~-~~~~g~ 185 (586)
||+. ..|+++++++|++ ..+.|.
T Consensus 112 ~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 112 LGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp TTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 7775 2799999997743 344443
No 386
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.65 E-value=1.1e-07 Score=83.74 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=54.2
Q ss_pred CCCeEEEEEE-CCCChhhhh-hhHHHHHHHHHhhcCCCce-EEEEEeCCCc-----------------------HHHHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQA-LAPEYAAAATELKSANESV-VLAKVDATEE-----------------------NELAHE 162 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~-~~p~~~~~~~~~~~~~~~v-~~~~vd~~~~-----------------------~~l~~~ 162 (586)
++++++|+|| ++||++|+. ++|.|.++++++++. ++ .++.|+.+.. ..+++.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 107 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK--GVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKA 107 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT--TCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHH
Confidence 5678888886 999999999 999999999999873 47 7777776431 246666
Q ss_pred cCCCCC-----------cEEEEEeCCee-eeecC
Q 007882 163 YDVQGF-----------PTIYFFVDGQH-KAYNG 184 (586)
Q Consensus 163 ~~i~~~-----------Pt~~~~~~g~~-~~~~g 184 (586)
|++... |+++++++|++ ..+.+
T Consensus 108 ~gv~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~ 141 (167)
T 2wfc_A 108 VDMELDLSAVLGNVRSKRYSLVIEDGVVTKVNVE 141 (167)
T ss_dssp TTCEECCHHHHSSCEECCEEEEEETTEEEEEEEC
T ss_pred cCCccccccccCcccceEEEEEEeCCEEEEEEec
Confidence 776543 88777788843 33443
No 387
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.65 E-value=4.6e-08 Score=86.63 Aligned_cols=89 Identities=11% Similarity=0.135 Sum_probs=68.2
Q ss_pred cCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC---CCcEEEEEEeCCcc-----------------------------
Q 007882 450 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTN----------------------------- 496 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~---~~~i~~~~id~~~~----------------------------- 496 (586)
.++++||+||++||++ |+...|.+.++.+.+.. ..++.++.|+.+.+
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999999853 13577666666521
Q ss_pred -ccccCCCCcCc---------------EEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 497 -EHHRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 497 -~~~~~~i~~~P---------------t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
....|++...| +++++ ++|+.+. ++.|..+.+.|.+.|++.+
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTD---YYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEE---EEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEE---EECCCCCHHHHHHHHHHHH
Confidence 12357888778 76666 6777764 6778889999999988765
No 388
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.65 E-value=5.7e-08 Score=89.75 Aligned_cols=106 Identities=11% Similarity=0.151 Sum_probs=72.0
Q ss_pred eEEEeCcchhHHhhccCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc------------------
Q 007882 435 VKIVVGNNFDEIVLDESK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------------------ 495 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~------------------ 495 (586)
+..+++..+.-.-. .++ .+||.||++||++|+...|.|.++.+++++. .+.++.|+.+.
T Consensus 43 l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~ 120 (218)
T 3u5r_E 43 LPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKA 120 (218)
T ss_dssp EECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHH
T ss_pred eECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHH
Confidence 33344444333222 355 5999999999999999999999999999763 47777777631
Q ss_pred -------------cccccCCCCcCcEEEEE-eCCCcccCcc------ccccccCHHHHHHHHHhcCC
Q 007882 496 -------------NEHHRAKSDGFPTILFF-PAGNKSFDPI------NVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 496 -------------~~~~~~~i~~~Pt~~~~-~~g~~~~~~~------~~~g~~~~~~l~~~i~~~~~ 542 (586)
.....|++..+|+++++ ++|+.+.... ...+..+.++|.+.|++.+.
T Consensus 121 ~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 121 YGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred hCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 11246899999999999 4565432100 01123457889998888764
No 389
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.64 E-value=4.3e-08 Score=86.10 Aligned_cols=89 Identities=7% Similarity=0.050 Sum_probs=68.2
Q ss_pred cCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcCC---CcEEEEEEeCCcc-----------------------------
Q 007882 450 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTN----------------------------- 496 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~~---~~i~~~~id~~~~----------------------------- 496 (586)
.++++||+||++||++ |+...|.+.++.+.+... .++.++.++.+..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 999999999999988641 3566666665431
Q ss_pred -ccccCCCCcCc---------------EEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 497 -EHHRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 497 -~~~~~~i~~~P---------------t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
....|++...| +++++ ++|+.+. ++.|..+.++|.+.|++.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLD---YFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEE---EEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEE---EeCCCCCHHHHHHHHHHHH
Confidence 12467888889 66666 6777764 6778888999999988754
No 390
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.62 E-value=7.7e-07 Score=73.36 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=79.1
Q ss_pred eEEe-ChhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHcCCCCCcEEEE
Q 007882 95 VVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (586)
Q Consensus 95 v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 173 (586)
+..| +..+++.++...++++|-|+++||++| .+.|.++|+.+ + .+.|+.++ +.++++++++. .|++++
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~---d~~F~~t~---~~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P---GVSFGIST---DSEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T---TSEEEEEC---CHHHHHHTTCC-SSCEEE
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C---CceEEEEC---hHHHHHHcCCC-CCeEEE
Confidence 4455 467899999889999999999999999 67899999998 5 58998886 37799999998 899999
Q ss_pred EeCC--eeeeecC----CCCHHHHHHHHHHh
Q 007882 174 FVDG--QHKAYNG----GRTKDAIVTWIKKK 198 (586)
Q Consensus 174 ~~~g--~~~~~~g----~~~~~~l~~~i~~~ 198 (586)
|+++ ....|.| ..+.+.|.+||...
T Consensus 92 fkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9976 5677886 78999999999864
No 391
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.62 E-value=9e-08 Score=84.62 Aligned_cols=45 Identities=20% Similarity=0.394 Sum_probs=36.5
Q ss_pred hCCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCceE-EEEEeCC
Q 007882 108 ENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVV-LAKVDAT 154 (586)
Q Consensus 108 ~~~~~~lv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~-~~~vd~~ 154 (586)
..++++|++||++||++|+.+ +|.|.+++++++.. ++. ++.|+.+
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--g~~~vv~Is~d 88 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--GVDSVICVAIN 88 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT--TCSEEEEEESS
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC
Confidence 333577889999999999999 99999999999874 366 7777665
No 392
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.61 E-value=8.2e-09 Score=78.56 Aligned_cols=60 Identities=15% Similarity=0.259 Sum_probs=45.6
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC---ccccccCCCCcCcEEEEEeCCCc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT---TNEHHRAKSDGFPTILFFPAGNK 517 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~---~~~~~~~~i~~~Pt~~~~~~g~~ 517 (586)
.+++||++||++|+.+.|.++++++.+.. .+.++++|.+ .....+++++++|++++ +|+.
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~ 65 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAA 65 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEE
Confidence 47789999999999999999998765432 4667777753 12246789999999877 6654
No 393
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.59 E-value=3.9e-08 Score=78.21 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=59.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC--ccc--cccCCCCcCcEEEEEeCCCcccCccccc
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNE--HHRAKSDGFPTILFFPAGNKSFDPINVD 525 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~--~~~--~~~~~i~~~Pt~~~~~~g~~~~~~~~~~ 525 (586)
...+.+++|+++||++|+.+.+.|++++. .+.|..+|++ .+. ...++ .++|++ +.+|+.+ ..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-----~~ 79 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-----MM 79 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-----EE
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-----Ee
Confidence 34678999999999999999999987642 2677777776 332 35789 999986 4577653 23
Q ss_pred cccCHHHHHHHHHhcCC
Q 007882 526 VDRTVVALYKFLKKNAS 542 (586)
Q Consensus 526 g~~~~~~l~~~i~~~~~ 542 (586)
+..+.+.|.++|.+...
T Consensus 80 ~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 80 HRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SSCCHHHHHHHHHSSSC
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 55788999999987653
No 394
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.59 E-value=6e-08 Score=73.91 Aligned_cols=70 Identities=13% Similarity=0.172 Sum_probs=52.0
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHH---HcCCCCCcEEEEEeCCeeeeecCCCCHHH
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAH---EYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~---~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~ 190 (586)
++.||++||++|+...+.|.+. ++.+..+|+++++.+.+ ++++.++|++ +.+|.. .|+.+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~---------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~---~~g~~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR---------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS---WSGFRPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE---EESCCHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC---------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE---EecCCHHH
Confidence 6789999999999999988752 36677889887765544 5899999998 347753 34466777
Q ss_pred HHHHHHH
Q 007882 191 IVTWIKK 197 (586)
Q Consensus 191 l~~~i~~ 197 (586)
|.+++.+
T Consensus 69 l~~~l~~ 75 (81)
T 1h75_A 69 INRLHPA 75 (81)
T ss_dssp HGGGSCC
T ss_pred HHHHHhc
Confidence 7666544
No 395
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.59 E-value=1.8e-07 Score=69.91 Aligned_cols=68 Identities=21% Similarity=0.328 Sum_probs=52.9
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHH---HcCCCCCcEEEEEeCCeeeeecCCCCHHH
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAH---EYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~---~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~ 190 (586)
++.|+++||++|+...+.|.++ ++.+..+|++.++.+.+ ++++.++|++++ +|.. .|+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA---------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGFRPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESCCHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc---------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCCCHHH
Confidence 6779999999999999988753 36677788888766555 799999999873 7753 34567788
Q ss_pred HHHHH
Q 007882 191 IVTWI 195 (586)
Q Consensus 191 l~~~i 195 (586)
|.+++
T Consensus 69 l~~~l 73 (75)
T 1r7h_A 69 IKQLQ 73 (75)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 396
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.58 E-value=1.6e-07 Score=83.09 Aligned_cols=85 Identities=11% Similarity=0.142 Sum_probs=62.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----------------------HHHHHHcC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~l~~~~~ 164 (586)
.+++++|+|| ++||++|..+.|.|.++++++ . ++.++.|.++.. ..+ +.|+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~---~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 120 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E---GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYG 120 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGT
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C---CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhC
Confidence 4789999999 899999999999999999888 3 588888876532 234 5555
Q ss_pred CC---------CCcEEEEEe-CCe-eeeecC-----CCCHHHHHHHHHHh
Q 007882 165 VQ---------GFPTIYFFV-DGQ-HKAYNG-----GRTKDAIVTWIKKK 198 (586)
Q Consensus 165 i~---------~~Pt~~~~~-~g~-~~~~~g-----~~~~~~l~~~i~~~ 198 (586)
+. ..|++++++ +|+ ...+.| ..+.+.+.+.|++.
T Consensus 121 v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 121 VLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 54 259999996 784 345543 34557777777654
No 397
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.58 E-value=7.7e-08 Score=84.25 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=63.4
Q ss_pred cCCc-EEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-----------------------cccccCCCC
Q 007882 450 ESKD-VLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------NEHHRAKSD 504 (586)
Q Consensus 450 ~~~~-~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-----------------------~~~~~~~i~ 504 (586)
.++. +||.|| ++||++|+...|.+.++.+++++. ++.++.|+.+. .....|++.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAK 105 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCC
Confidence 3565 999999 999999999999999999999863 47777776652 112458888
Q ss_pred c----CcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHh
Q 007882 505 G----FPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKK 539 (586)
Q Consensus 505 ~----~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~ 539 (586)
+ +|+++++ ++|+.+. .+.| ....+++++.|++
T Consensus 106 ~~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 106 GFILPARITFVIDKKGIIRH---IYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp CSSSCCCEEEEECTTSBEEE---EEECSSCTTHHHHHHHHHHHH
T ss_pred CcCcccceEEEECCCCEEEE---EEecCCCCCcCHHHHHHHHHH
Confidence 8 9999988 5676653 4555 3355666666654
No 398
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.56 E-value=1.7e-07 Score=82.35 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHcC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~ 164 (586)
.|++++|+|| ++||++|..++|.|.++++++ . ++.++.|+++. ...+++.|+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 117 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLG 117 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhC
Confidence 5789999999 899999999999999999988 3 57777776542 235677777
Q ss_pred CCC---------CcEEEEEe-CCe-eeeecC
Q 007882 165 VQG---------FPTIYFFV-DGQ-HKAYNG 184 (586)
Q Consensus 165 i~~---------~Pt~~~~~-~g~-~~~~~g 184 (586)
+.. .|++++++ +|+ ...+.|
T Consensus 118 v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 118 VDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 753 49999996 784 345543
No 399
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.56 E-value=2e-07 Score=87.76 Aligned_cols=88 Identities=14% Similarity=0.309 Sum_probs=66.3
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------------HHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~l 159 (586)
.|+++||+|| ++||++|..++|.|.++++++++. ++.++.|+++.. ..+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~--gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 5789999999 999999999999999999999863 478888877532 256
Q ss_pred HHHcCCC------CCcEEEEEe-CCee-eeecC----CCCHHHHHHHHHHh
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKK 198 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~~i~~~ 198 (586)
++.|++. .+|++++++ +|++ ..+.+ ..+.+.+.+.|...
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 7777775 579999996 7843 34444 34566777666543
No 400
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.56 E-value=1.4e-07 Score=84.76 Aligned_cols=103 Identities=12% Similarity=0.082 Sum_probs=71.6
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------ccc----c-c
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------NEH----H-R 500 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------~~~----~-~ 500 (586)
+..++++.+.-.-. .++++||.||++||++|+...|.+.++.+++++. .+.++.|+++. ... . .
T Consensus 31 l~d~~G~~~~l~~~-~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~ 108 (187)
T 3dwv_A 31 VLDADHKPYNLVQH-KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTK 108 (187)
T ss_dssp CBBTTSCBCCGGGG-TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBC
T ss_pred EEcCCCCEeeHHHh-CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhc
Confidence 33445554433222 4789999999999999999999999999999874 46666665431 000 1 1
Q ss_pred --------------------------------CCCCcCc---EEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 501 --------------------------------AKSDGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 501 --------------------------------~~i~~~P---t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
+++..+| +++++ ++|+.+. ++.|..+.+.|.+.|++.+.
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~---~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 109 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHC-
T ss_pred cCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEE---EECCCCCHHHHHHHHHHHHh
Confidence 1234667 77777 6777764 67788899999999988764
No 401
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.56 E-value=5.8e-08 Score=85.75 Aligned_cols=88 Identities=10% Similarity=-0.003 Sum_probs=64.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc------c---cc-----cc---------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------N---EH-----HR--------------- 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~------~---~~-----~~--------------- 500 (586)
.++++||.||++||++|+...|.+.++.+++.+. .+.++.++++. . .. ..
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4789999999999999999999999999998763 47777776531 0 00 00
Q ss_pred ------C--------C-----CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 501 ------A--------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 501 ------~--------~-----i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+ + ++.+|+++++ ++|+.+. ++.|..+.+.|.+.|++.+
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVK---RYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEE---EcCCCCCHHHHHHHHHHHh
Confidence 1 2 3445877777 6677764 6778777788888887654
No 402
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.55 E-value=1.8e-07 Score=82.57 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCeE-EEEEECCCChhhh-hhhHHHHHHHHHhhcCCCceEEEE-EeCCC-----------------------cHHHHHH
Q 007882 109 NNKFV-MVEFYAPWCGHCQ-ALAPEYAAAATELKSANESVVLAK-VDATE-----------------------ENELAHE 162 (586)
Q Consensus 109 ~~~~~-lv~f~a~wC~~C~-~~~p~~~~~~~~~~~~~~~v~~~~-vd~~~-----------------------~~~l~~~ 162 (586)
+++++ |++||++||++|. .++|.|.+++++++..+ +.++. |..+. +..+++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~ 119 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKE 119 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHH
Confidence 45655 5556699999999 59999999999998744 55543 55442 1257777
Q ss_pred cCCC-------------CCcEEEEEeCCee-eeecC
Q 007882 163 YDVQ-------------GFPTIYFFVDGQH-KAYNG 184 (586)
Q Consensus 163 ~~i~-------------~~Pt~~~~~~g~~-~~~~g 184 (586)
||+. ..|+++++++|++ ..+.+
T Consensus 120 yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~ 155 (173)
T 3mng_A 120 TDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVE 155 (173)
T ss_dssp HTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEEC
T ss_pred hCCCcccccccccCCcceEEEEEEEECCEEEEEEEe
Confidence 8775 3599999998833 44444
No 403
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.54 E-value=1.6e-07 Score=82.67 Aligned_cols=84 Identities=13% Similarity=0.138 Sum_probs=60.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHcC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~ 164 (586)
.|++++|+|| ++||++|..++|.|.+++++ . ++.++.|+++. +..+++.|+
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 119 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--E---EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYG 119 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--T---TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHT
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--C---CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhC
Confidence 5789999999 78999999999999998876 2 47777777653 225566677
Q ss_pred CCC------CcEEEEEe-CCee-eeecC-----CCCHHHHHHHHHH
Q 007882 165 VQG------FPTIYFFV-DGQH-KAYNG-----GRTKDAIVTWIKK 197 (586)
Q Consensus 165 i~~------~Pt~~~~~-~g~~-~~~~g-----~~~~~~l~~~i~~ 197 (586)
+.. .|++++++ +|++ ..+.+ ..+.+.+.+.|++
T Consensus 120 v~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 120 VVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 764 89999996 7844 33332 3345666666653
No 404
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.54 E-value=9e-08 Score=85.64 Aligned_cols=88 Identities=14% Similarity=0.074 Sum_probs=65.7
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------ccc----cc----------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------NEH----HR---------------- 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------~~~----~~---------------- 500 (586)
.++++||.||++||++|+...|.|.++.+++.+. .+.++.|+++. ... .+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 4789999999999999999999999999999763 47777776542 000 11
Q ss_pred --------CCCCcCc-------EEEEE-eCCCcccCccccccccCHHHHHHHHHhcC
Q 007882 501 --------AKSDGFP-------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 501 --------~~i~~~P-------t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
+.+..+| +++++ ++|+.+. ++.|..+.++|.+.|++.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVG---AWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEE---EECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEE---EeCCCCCHHHHHHHHHHHh
Confidence 1245678 55555 7787764 6778888999999998754
No 405
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.53 E-value=3.6e-07 Score=85.57 Aligned_cols=86 Identities=14% Similarity=0.303 Sum_probs=65.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC----------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---------------------------------- 154 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------------------- 154 (586)
+++.+++.|+.+||++|+++.|.+.++.+. + +|.+..+...
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 170 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLK 170 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCC
Confidence 357789999999999999999999887653 2 4665544331
Q ss_pred ----------------CcHHHHHHcCCCCCcEEEEEe-CCeeeeecCCCCHHHHHHHHHHhc
Q 007882 155 ----------------EENELAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 155 ----------------~~~~l~~~~~i~~~Pt~~~~~-~g~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
.+..+++++||+++||+++.. +|......|..+.+.|.++|.+..
T Consensus 171 l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 171 LNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 123567789999999999987 576567889999999998886654
No 406
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.52 E-value=8.8e-08 Score=84.83 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=65.4
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC--------c-cc----c------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--------T-NE----H------------------ 498 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~--------~-~~----~------------------ 498 (586)
.++++||.||++||++|+ ..|.+.++.+++.+. .+.++.++++ . .. .
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 478999999999999999 999999999999763 4666666542 0 00 0
Q ss_pred ------------ccCCCCcCc------EEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 499 ------------HRAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 499 ------------~~~~i~~~P------t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
..+++.++| +++++ ++|+.+. ++.|..+.+.|.+.|++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYE---RYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEE---EECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHHHH
Confidence 125678899 66666 7787764 67787788888888877653
No 407
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.51 E-value=1.2e-07 Score=85.63 Aligned_cols=89 Identities=13% Similarity=0.062 Sum_probs=67.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------cc----c-c----------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------NE----H-H---------------- 499 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------~~----~-~---------------- 499 (586)
.++++||.||++||++|+...|.+.++.+++.+. .+.++.|+++. .. . .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4789999999999999999999999999999763 46666665541 00 0 0
Q ss_pred -------------cCCCCcCc------EEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 500 -------------RAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 500 -------------~~~i~~~P------t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
.+++.++| +++++ ++|+.+. ++.|..+.+.|.+.|++.+.
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHh
Confidence 13677888 66666 6787764 67788889999999987653
No 408
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.50 E-value=1.3e-07 Score=72.75 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=54.9
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc------cccCC--CCcCcEEEEEeCCCcccCccccc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------HHRAK--SDGFPTILFFPAGNKSFDPINVD 525 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~------~~~~~--i~~~Pt~~~~~~g~~~~~~~~~~ 525 (586)
.++.|+++||++|+.+.+.|++++..+.+ +.+..+|++.+. ...++ +.++|++ |.+|+.+ .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~---i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i------~ 70 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD---FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI------G 70 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS---CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE------E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC---ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE------E
Confidence 36789999999999999999999987654 677777765432 24577 8999997 3466554 1
Q ss_pred cccCHHHHHHHHHhcC
Q 007882 526 VDRTVVALYKFLKKNA 541 (586)
Q Consensus 526 g~~~~~~l~~~i~~~~ 541 (586)
| .++|.++++++.
T Consensus 71 ~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 71 G---YTDFAAWVKENL 83 (85)
T ss_dssp S---SHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHhc
Confidence 2 267888887653
No 409
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.50 E-value=4.9e-07 Score=81.63 Aligned_cols=86 Identities=23% Similarity=0.380 Sum_probs=66.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------------- 155 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------------- 155 (586)
.++++|+.||+.||++|+.+.|.+.++.+++.+ ++.|..+...-
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999988766 67776555420
Q ss_pred ----------------------------------------cHHHHHHcCCCCCcEEEEEeCCe-eeeecCCCCHHHHHHH
Q 007882 156 ----------------------------------------ENELAHEYDVQGFPTIYFFVDGQ-HKAYNGGRTKDAIVTW 194 (586)
Q Consensus 156 ----------------------------------------~~~l~~~~~i~~~Pt~~~~~~g~-~~~~~g~~~~~~l~~~ 194 (586)
+..++.++||.++||+++ +|+ .....|..+.+.+.+.
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~ 178 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKL 178 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHH
Confidence 013456789999999877 774 4555688888988888
Q ss_pred HHHhc
Q 007882 195 IKKKI 199 (586)
Q Consensus 195 i~~~~ 199 (586)
|...+
T Consensus 179 i~~l~ 183 (192)
T 3h93_A 179 ADYLI 183 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 410
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.50 E-value=1.3e-07 Score=83.57 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=67.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc--------c-cc----c-cC--------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--------N-EH----H-RA-------------- 501 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~--------~-~~----~-~~-------------- 501 (586)
.++++||.||++||++|+...|.+.++.+++.+. .+.++.|+++. . .. . .+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999763 47777776641 0 00 1 11
Q ss_pred ---------------CC--CcCc---EEEEE-eCCCcccCccccccccCHHHHHHHHHhcCC
Q 007882 502 ---------------KS--DGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 542 (586)
Q Consensus 502 ---------------~i--~~~P---t~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~~~ 542 (586)
++ .++| +++++ ++|+.+. ++.|..+.+.|.+.|++.+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVD---RYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEE---eeCCCCCHHHHHHHHHHHhh
Confidence 33 5678 76666 6777764 67788888889999887654
No 411
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.47 E-value=6e-07 Score=81.50 Aligned_cols=67 Identities=15% Similarity=0.238 Sum_probs=53.7
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHHHHHcC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~ 164 (586)
.|++++|+|| ++||++|..++|.|.++++++ . ++.++.|.++. ...+++.|+
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~yg 152 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYG 152 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTT
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhC
Confidence 5889999999 789999999999999999988 3 58888887652 235667777
Q ss_pred CC---------CCcEEEEEe-CCee
Q 007882 165 VQ---------GFPTIYFFV-DGQH 179 (586)
Q Consensus 165 i~---------~~Pt~~~~~-~g~~ 179 (586)
+. ..|++++++ +|++
T Consensus 153 v~~~~~~~~g~~~p~~~lID~~G~I 177 (200)
T 3zrd_A 153 VAITEGPLAGLTARAVVVLDGQDNV 177 (200)
T ss_dssp CEECSSTTTTSBCCEEEEECTTSBE
T ss_pred ceeecccCCCccccEEEEECCCCeE
Confidence 75 369999996 7844
No 412
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.46 E-value=2.4e-07 Score=83.01 Aligned_cols=87 Identities=11% Similarity=-0.012 Sum_probs=63.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc---------ccc----cc----------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------NEH----HR---------------- 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------~~~----~~---------------- 500 (586)
.++++||.||++||++|+...|.+.++.+++.+. .+.++.|+++. ... ..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 4789999999999999999999999999999763 47777776541 000 00
Q ss_pred -----C----------C-----CCcCcEEEEE-eCCCcccCccccccccCHHHHHHHHHhc
Q 007882 501 -----A----------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 501 -----~----------~-----i~~~Pt~~~~-~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
| + ++.+|+++++ ++|+.+. ++.|..+.++|.+.|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVK---RYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEE---EECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHh
Confidence 1 2 3345998888 6677664 677877888888777653
No 413
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.46 E-value=2.6e-07 Score=84.46 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=38.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~ 494 (586)
.++++||.|||+||++|+...|.|+++.+++++. .+.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 4689999999999999999999999999998763 4777777654
No 414
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.43 E-value=1.9e-06 Score=79.60 Aligned_cols=86 Identities=17% Similarity=0.137 Sum_probs=63.3
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-------------------------------HHHH
Q 007882 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------------------------------NELA 160 (586)
Q Consensus 112 ~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------------~~l~ 160 (586)
.+|++||++||++|..++|.|.+++++++.. ++.++.|.++.. ..++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va 111 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR--NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA 111 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH
Confidence 5677779999999999999999999999863 577777776532 2456
Q ss_pred HHcCCC------------CCcEEEEEe-CCee-eeecC----CCCHHHHHHHHHHhc
Q 007882 161 HEYDVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (586)
Q Consensus 161 ~~~~i~------------~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~~i~~~~ 199 (586)
+.|++. .+|++++++ +|++ ..+.| .++.+.+.+.|+...
T Consensus 112 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 112 ILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 667763 379999996 7843 44443 356788888877653
No 415
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.42 E-value=9.4e-07 Score=79.98 Aligned_cols=43 Identities=33% Similarity=0.508 Sum_probs=37.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT 154 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~ 154 (586)
.++++|+.||++||++|+.+.|.+.++.+.+.+ ++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 478999999999999999999999999988866 6888888764
No 416
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.40 E-value=1.9e-07 Score=83.93 Aligned_cols=89 Identities=13% Similarity=0.074 Sum_probs=67.4
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc---------------------------ccccC
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------------------------EHHRA 501 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~---------------------------~~~~~ 501 (586)
.++++||+|| ++||++|+...|.+.++.+.+... ++.++.|+.+.. ....|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 4689999999 999999999999999999998753 466666666531 11357
Q ss_pred CCC------cCcEEEEE-eCCCcccCccccccc----cCHHHHHHHHHhcCC
Q 007882 502 KSD------GFPTILFF-PAGNKSFDPINVDVD----RTVVALYKFLKKNAS 542 (586)
Q Consensus 502 ~i~------~~Pt~~~~-~~g~~~~~~~~~~g~----~~~~~l~~~i~~~~~ 542 (586)
++. .+|+++++ ++|+.+. ++.|. ++.++|.+.|++...
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQA---IEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEE---EEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHhh
Confidence 887 89999999 5676653 44453 367888888887653
No 417
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.40 E-value=3e-07 Score=80.27 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=62.3
Q ss_pred CC-cEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-----------------------c--ccccCCC
Q 007882 451 SK-DVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------N--EHHRAKS 503 (586)
Q Consensus 451 ~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-----------------------~--~~~~~~i 503 (586)
++ ++||.|| ++||++|+...|.+.++.+.+.+ .++.++.|+.+. + ....|++
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN-DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS-SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 44 8999998 99999999999999999999875 357777776643 1 1246788
Q ss_pred C----cCc--EEEEE-eCCCcccCccccccc----cCHHHHHHHHHh
Q 007882 504 D----GFP--TILFF-PAGNKSFDPINVDVD----RTVVALYKFLKK 539 (586)
Q Consensus 504 ~----~~P--t~~~~-~~g~~~~~~~~~~g~----~~~~~l~~~i~~ 539 (586)
. ++| +++++ ++|+.+. ++.|. ...+++++.|++
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRF---AEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEE---EEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCCeeeeEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHH
Confidence 7 899 66666 6676654 44443 366778887765
No 418
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.39 E-value=3e-07 Score=83.26 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=68.2
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc---------------------------ccccC
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------------------------EHHRA 501 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~---------------------------~~~~~ 501 (586)
.++++||.|| ++||++|+...|.+.++.+++... ++.++.|+.+.. ....|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHh
Confidence 3689999999 999999999999999999998763 577777766531 01347
Q ss_pred CCC-----cCcEEEEE-eCCCcccCccccccc----cCHHHHHHHHHhcCC
Q 007882 502 KSD-----GFPTILFF-PAGNKSFDPINVDVD----RTVVALYKFLKKNAS 542 (586)
Q Consensus 502 ~i~-----~~Pt~~~~-~~g~~~~~~~~~~g~----~~~~~l~~~i~~~~~ 542 (586)
++. .+|+++++ ++|+.+. ++.|. .+.++|.+.|++...
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQF---VSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CCcccCCCccceEEEEcCCCeEEE---EEecCCCCCCCHHHHHHHHHHHhh
Confidence 888 99999999 4666653 44453 378999999988765
No 419
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.39 E-value=2.4e-07 Score=84.15 Aligned_cols=88 Identities=9% Similarity=0.081 Sum_probs=66.5
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------------cc
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------------EH 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------------~~ 498 (586)
.++++||+|| ++||++|+...|.+.++.+++... ++.++.|+.+.. ..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 999999999999999999998753 466776665531 11
Q ss_pred ccCCCC-----cCcEEEEEe-CCCcccCccccccc----cCHHHHHHHHHhcC
Q 007882 499 HRAKSD-----GFPTILFFP-AGNKSFDPINVDVD----RTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i~-----~~Pt~~~~~-~g~~~~~~~~~~g~----~~~~~l~~~i~~~~ 541 (586)
..|++. .+|+++++. +|+.+. ++.|. .+.++|.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRH---AVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEE---EEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 357888 999999994 666553 44453 36788999888754
No 420
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.39 E-value=1e-06 Score=81.09 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=63.2
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----------------------------HHHHHHc
Q 007882 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NELAHEY 163 (586)
Q Consensus 112 ~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~l~~~~ 163 (586)
.+|++||++||++|..+++.|.+++++++.. ++.++.|.++.. ..+++.|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~y 111 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL--NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKL 111 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHh
Confidence 5566679999999999999999999999863 577888877532 2566777
Q ss_pred CCC------------CCcEEEEEe-CCee-eeecC----CCCHHHHHHHHHHhc
Q 007882 164 DVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (586)
Q Consensus 164 ~i~------------~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~~i~~~~ 199 (586)
++. .+|++++++ +|++ ..+.| .++.+.+.+.|+...
T Consensus 112 gv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 112 KIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp TCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 773 379999996 7843 33332 457788888877653
No 421
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.34 E-value=8.5e-07 Score=79.12 Aligned_cols=58 Identities=16% Similarity=0.046 Sum_probs=44.0
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 494 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~ 494 (586)
+..++++.+.-.-. .++++||.||++||++|+...|.+.++.+++++. .+.++.|.++
T Consensus 23 l~d~~G~~v~l~~~-~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d 80 (180)
T 3kij_A 23 VKDAKGRTVSLEKY-KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCN 80 (180)
T ss_dssp EEBTTSCEEEGGGG-TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECC
T ss_pred EecCCCCEecHHHc-CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECC
Confidence 34445554443222 4789999999999999999999999999999863 5777777654
No 422
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.34 E-value=3e-06 Score=78.45 Aligned_cols=88 Identities=13% Similarity=0.081 Sum_probs=64.8
Q ss_pred CC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-----------------------------HH
Q 007882 110 NK-FVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------------NE 158 (586)
Q Consensus 110 ~~-~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------------~~ 158 (586)
++ ++||+|| ++||++|..+++.|.+++++++.. ++.++.|.++.. ..
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~--~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~ 105 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR--GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRE 105 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc--CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHH
Confidence 44 8899998 999999999999999999999873 477777776531 14
Q ss_pred HHHHcCCC------------CCcEEEEEe-CCee-eeecC----CCCHHHHHHHHHHhc
Q 007882 159 LAHEYDVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (586)
Q Consensus 159 l~~~~~i~------------~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~~i~~~~ 199 (586)
+++.|++. .+|++++++ +|++ ..+.| .++.+.+.+.|....
T Consensus 106 va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 106 LAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 56667764 479999996 7743 34433 356788888777543
No 423
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.33 E-value=7.1e-07 Score=71.68 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=47.9
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc-------HHHHHHcCCCCCcEEEE
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------NELAHEYDVQGFPTIYF 173 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------~~l~~~~~i~~~Pt~~~ 173 (586)
+.+++++..++ ++.|+++||++|+...+.|.++...+. .+. .+|++.+ ..+.+.+++.++|++
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~----~~~--~vdi~~~~~~~~~~~~l~~~~g~~~vP~i-- 72 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG----LLE--FVDITATSDTNEIQDYLQQLTGARTVPRV-- 72 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT----SEE--EEEGGGSTTHHHHHHHHHHHHSCCCSCEE--
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC----ccE--EEEccCCCCHHHHHHHHHHHhCCCCcCeE--
Confidence 34566665543 667999999999999999987543321 244 4555544 357788999999997
Q ss_pred EeCCee
Q 007882 174 FVDGQH 179 (586)
Q Consensus 174 ~~~g~~ 179 (586)
|.+|..
T Consensus 73 ~~~g~~ 78 (105)
T 1kte_A 73 FIGKEC 78 (105)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 447754
No 424
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.30 E-value=1.1e-06 Score=79.59 Aligned_cols=88 Identities=10% Similarity=0.060 Sum_probs=65.8
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc------------------------------c
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------------H 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~------------------------------~ 498 (586)
.++++||+|| ++||++|+...|.|.++.++++.. ++.++.|+.+... .
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 4689999999 999999999999999999998763 5777777665311 1
Q ss_pred ccCCCC------cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 499 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i~------~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
..|++. .+|+++++ ++|+.+. .+.| .++.+++++.|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQ---ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEE---EEeCCCCCCCCHHHHHHHHHhcc
Confidence 346777 79998888 5566543 3334 457889999888653
No 425
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.30 E-value=6.1e-07 Score=80.48 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=37.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~ 494 (586)
.++++||.||++||++|+...|.+.++.+++++. .+.++.++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECc
Confidence 4689999999999999999999999999999763 4777777653
No 426
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.29 E-value=1.7e-06 Score=76.53 Aligned_cols=90 Identities=11% Similarity=0.156 Sum_probs=64.7
Q ss_pred cCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCCC-cEEEEEEeCCcc--c---c----cc------------------
Q 007882 450 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTN--E---H----HR------------------ 500 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~-~C~~~~~~~~~~~~~~~~~~-~i~~~~id~~~~--~---~----~~------------------ 500 (586)
.++++||.||++||+ +|+...|.+.++.+.+.... ++.++.|+.+.. . . .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 478999999999999 99999999999999887542 466666665421 0 0 00
Q ss_pred -------------------CCCCcCcEEEEE-eCCCcccCcccccccc--CHHHHHHHHHhcCC
Q 007882 501 -------------------AKSDGFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 542 (586)
Q Consensus 501 -------------------~~i~~~Pt~~~~-~~g~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 542 (586)
+++...|+++++ ++|+.+. ++.|.. +.++|.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLK---DYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEE---EEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEE---EEcCCCCCCHHHHHHHHHHHHh
Confidence 234568987777 5666653 566754 58999999988764
No 427
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=2.5e-06 Score=71.29 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=55.7
Q ss_pred hhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---H----HHHHHcCCCCCcEEE
Q 007882 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---N----ELAHEYDVQGFPTIY 172 (586)
Q Consensus 100 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~i~~~Pt~~ 172 (586)
.+.++.++..++ ++.|+++||++|+...+.|.++. +.+..+|++.. + .+.+.+++.++|+++
T Consensus 17 ~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 17 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 456677776664 34499999999999999988752 33445666544 3 377889999999984
Q ss_pred EEeCCeee-ee---cCCCCHHHHHHHHHHh
Q 007882 173 FFVDGQHK-AY---NGGRTKDAIVTWIKKK 198 (586)
Q Consensus 173 ~~~~g~~~-~~---~g~~~~~~l~~~i~~~ 198 (586)
.+|..+ .+ .+......|.++|...
T Consensus 86 --i~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 86 --VNGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp --ETTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred --ECCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 477533 22 1222333455555554
No 428
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.23 E-value=3.8e-07 Score=74.51 Aligned_cols=59 Identities=15% Similarity=0.174 Sum_probs=43.1
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH-------HHHHHcCCCCCcEEEEEeCCee
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN-------ELAHEYDVQGFPTIYFFVDGQH 179 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-------~l~~~~~i~~~Pt~~~~~~g~~ 179 (586)
.++.|+++||++|+...+.|.++.... + . +..+|++.++ .+.+.+++.++|++++ +|..
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-G---A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-T---S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-C---c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 477799999999999999887543211 1 1 6667776653 6888899999998743 7754
No 429
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.21 E-value=7.7e-06 Score=73.65 Aligned_cols=42 Identities=26% Similarity=0.549 Sum_probs=36.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (586)
.++++||.||+.||++|+.+.|.+.++.+++.+ ++.|..++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~---~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD---DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC---CeEEEEecC
Confidence 368999999999999999999999999888766 677877765
No 430
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.20 E-value=6.5e-07 Score=82.41 Aligned_cols=81 Identities=15% Similarity=0.234 Sum_probs=57.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC-----------------------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------------- 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~----------------------------------- 494 (586)
+++.+|+.||++||++|+.+.|.+.++.+. + -.+.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999998752 1 12333333211
Q ss_pred ---c------cccccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhc
Q 007882 495 ---T------NEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 495 ---~------~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
. .....++|+++||+ ++.+|. .+.|..+.+.|.++|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC------EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe------EecCCCCHHHHHHHHHHh
Confidence 0 01145799999998 455663 356888899999998765
No 431
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.19 E-value=3.4e-06 Score=71.81 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=48.0
Q ss_pred hhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---H----HHHHHcCCCCCcEEE
Q 007882 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---N----ELAHEYDVQGFPTIY 172 (586)
Q Consensus 100 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~i~~~Pt~~ 172 (586)
...++.++..++ ++.|+++||++|+...+.|.++. +.+..+|++.. + .+.+.+++.++|+++
T Consensus 39 ~~~~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~---------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 39 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHhcCCC--EEEEECCCChhHHHHHHHHHHcC---------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 466777777664 34499999999999999988652 33444555543 3 377889999999984
Q ss_pred EEeCCee
Q 007882 173 FFVDGQH 179 (586)
Q Consensus 173 ~~~~g~~ 179 (586)
.+|..
T Consensus 108 --i~G~~ 112 (146)
T 2ht9_A 108 --VNGTF 112 (146)
T ss_dssp --ETTEE
T ss_pred --ECCEE
Confidence 47753
No 432
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.18 E-value=1.6e-06 Score=76.88 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=60.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc----------------------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------------- 495 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~---------------------------------- 495 (586)
+.+.+|+.|+++||++|+.+.|.+.++.+.+.. -++.+..+....
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 356789999999999999999999999987643 234444432210
Q ss_pred -----------------------------------cccccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhc
Q 007882 496 -----------------------------------NEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 496 -----------------------------------~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
.....++|.++||+++ +|+ .+.|..+.+.|.+.|.+.
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~------~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA------LVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE------EECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE------EeeCCCCHHHHHHHHHHH
Confidence 0113578999999887 553 456888999999998765
Q ss_pred C
Q 007882 541 A 541 (586)
Q Consensus 541 ~ 541 (586)
+
T Consensus 172 l 172 (175)
T 3gyk_A 172 R 172 (175)
T ss_dssp H
T ss_pred H
Confidence 3
No 433
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.17 E-value=2.1e-06 Score=77.39 Aligned_cols=88 Identities=11% Similarity=0.119 Sum_probs=65.0
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------------cc
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------------EH 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------------~~ 498 (586)
.++++||+|| ++||++|+...|.|.++.+++.. .++.++.|+.+.. ..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE-RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4689999999 99999999999999999999864 2466666665421 11
Q ss_pred ccCCCC-----cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 499 HRAKSD-----GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i~-----~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
..|++. .+|+++++ ++|+.+. .+.| .++.+++++.|+...
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQH---LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEE---EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEE---EEeCCCCCCCCHHHHHHHHHHHh
Confidence 357888 89999999 5666553 3333 346888888887643
No 434
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.17 E-value=2.6e-06 Score=78.53 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=65.3
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------------ccc
Q 007882 451 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------------EHH 499 (586)
Q Consensus 451 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------------~~~ 499 (586)
++++||+|| ++||++|+...|.|.++.+++.. .++.++.|+.+.. ...
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD-VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 99999999999999999999865 2466777765431 113
Q ss_pred cCCCC------cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 500 RAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 500 ~~~i~------~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
.|++. .+|+++++ ++|+.+. .+.| .++.++|++.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~---~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKH---LSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHhh
Confidence 57887 99999999 5666543 2333 357788988887654
No 435
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.16 E-value=3.2e-06 Score=65.91 Aligned_cols=69 Identities=12% Similarity=0.158 Sum_probs=50.7
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC-----Cc----HHHHHHcCCCCCcEEEEEeCCeeeeecC
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----EE----NELAHEYDVQGFPTIYFFVDGQHKAYNG 184 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----~~----~~l~~~~~i~~~Pt~~~~~~g~~~~~~g 184 (586)
++.|+++||++|++..+.|.++. +.+-.+|++ +. .++.+.+++.++|++++ +|. +.|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g---------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~---~i~ 79 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG---------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK---HVL 79 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE---EEE
T ss_pred EEEEECCCChHHHHHHHHHHHcC---------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE---EEe
Confidence 66799999999999998887642 223344544 22 56677889999999876 774 345
Q ss_pred CCCHHHHHHHHH
Q 007882 185 GRTKDAIVTWIK 196 (586)
Q Consensus 185 ~~~~~~l~~~i~ 196 (586)
+.+.+.|.+++.
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 568999998874
No 436
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.16 E-value=2.8e-06 Score=77.26 Aligned_cols=88 Identities=11% Similarity=0.071 Sum_probs=65.4
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------------cc
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------------EH 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------------~~ 498 (586)
.++++||+|| ++||++|+...|.+.++.++++. .++.++.|+.+.. ..
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD-IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH
Confidence 3679999999 99999999999999999999875 3477777776531 01
Q ss_pred ccCCCC------cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 499 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i~------~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
..|++. .+|+++++ ++|+.+. ++.| .++.++|++.|++..
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQ---ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEE---EEeCCCCCCCCHHHHHHHHHHhh
Confidence 346777 89999998 5566543 2333 356788888887644
No 437
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.14 E-value=3.3e-06 Score=77.27 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=58.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC-----------------------------------
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------------- 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~----------------------------------- 494 (586)
+++.+|+.|+++||++|+.+.|.++++.+. + -.+.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 456899999999999999999999997652 2 13333333210
Q ss_pred --c-------cccccCCCCcCcEEEEEeCCCcccCccccccccCHHHHHHHHHhc
Q 007882 495 --T-------NEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 495 --~-------~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
. .....++|+++||+++ .+|+ .+.|..+.+.|.++|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~------~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE------LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC------CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE------EecCCCCHHHHHHHHHhc
Confidence 0 0014679999999987 6665 356888999999999764
No 438
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.12 E-value=4.6e-06 Score=77.03 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=63.1
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc------------------------------c
Q 007882 450 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------------H 498 (586)
Q Consensus 450 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~------------------------------~ 498 (586)
.++++||.||+ +||++|+...|.|.++.+++++. .+.++.|+.+... .
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 46899999996 99999999999999999999763 4666666665311 1
Q ss_pred ccCCCC------cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHh
Q 007882 499 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKK 539 (586)
Q Consensus 499 ~~~~i~------~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~ 539 (586)
..|++. .+|+++++ ++|+.+. .+.| ....+++++.|+.
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQ---ITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEE---EEEECTTBCCCHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHH
Confidence 246777 89999999 4566543 3333 2457888888865
No 439
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.11 E-value=1.2e-05 Score=72.68 Aligned_cols=42 Identities=24% Similarity=0.487 Sum_probs=35.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (586)
.++++|+.||..||++|+.+.|.+.++.+++.. ++.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 468899999999999999999999999988754 566665553
No 440
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.10 E-value=5.7e-07 Score=72.26 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=52.2
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-------ccccCCCCcCcEEEEEeCCCcccCcccccc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------EHHRAKSDGFPTILFFPAGNKSFDPINVDV 526 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-------~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g 526 (586)
.++.|+++||++|+.+.+.|+++...+. .+.++.+|.+.+ ....+++.++|++ |.+|+.+...-...+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i~g~~~~~~ 87 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECIGGCTDLES 87 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEEESHHHHHH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEEeccHHHHH
Confidence 4677999999999999999998654332 266666665421 1245789999997 446765421001112
Q ss_pred ccCHHHHHHHHHhcC
Q 007882 527 DRTVVALYKFLKKNA 541 (586)
Q Consensus 527 ~~~~~~l~~~i~~~~ 541 (586)
......|.++|...+
T Consensus 88 ~~~~g~L~~~l~~~g 102 (105)
T 1kte_A 88 MHKRGELLTRLQQVG 102 (105)
T ss_dssp HHHHTHHHHHHHHHT
T ss_pred HHHCCcHHHHHHHcC
Confidence 223566777776543
No 441
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.10 E-value=3.1e-06 Score=76.85 Aligned_cols=59 Identities=15% Similarity=0.097 Sum_probs=40.0
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcCC--CcEEEEEEeCC
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV--DSIVIAKMDGT 494 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~~--~~i~~~~id~~ 494 (586)
+...++..+.-.-. .++++||+||++||++ |+...|.|.++.+.+... .++.++.|+.+
T Consensus 26 l~d~~G~~v~l~~~-~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 26 LEDMYGNEFTEKNL-LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp EEETTSCEEEGGGG-TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred EEcCCCCEEeHHHc-CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 33444444433222 4789999999999998 999999999988877531 23555555444
No 442
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.09 E-value=1.3e-06 Score=66.26 Aligned_cols=70 Identities=7% Similarity=0.053 Sum_probs=47.4
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--c---ccCCCCcCcEEEEEeCCCcccCccccccccC
Q 007882 455 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H---HRAKSDGFPTILFFPAGNKSFDPINVDVDRT 529 (586)
Q Consensus 455 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~---~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~ 529 (586)
++.|+++||++|+.+.+.+++. + +.+..+|++.+. . ..+++.++|+++ .+|+.+ +..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~---i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~~-------~g~~ 65 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----G---FDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLSW-------SGFR 65 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T---CCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEEE-------ESCC
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----C---CCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEEE-------ecCC
Confidence 6789999999999999998863 2 445556665432 2 247899999983 455432 2356
Q ss_pred HHHHHHHHHhcC
Q 007882 530 VVALYKFLKKNA 541 (586)
Q Consensus 530 ~~~l~~~i~~~~ 541 (586)
.+.|.++|.++.
T Consensus 66 ~~~l~~~l~~~~ 77 (81)
T 1h75_A 66 PDMINRLHPAPH 77 (81)
T ss_dssp HHHHGGGSCCC-
T ss_pred HHHHHHHHhccc
Confidence 777777775543
No 443
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.09 E-value=5e-06 Score=72.69 Aligned_cols=87 Identities=10% Similarity=0.045 Sum_probs=60.7
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-----------------------cccCCCCc
Q 007882 450 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------HHRAKSDG 505 (586)
Q Consensus 450 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-----------------------~~~~~i~~ 505 (586)
.+++++|+||+ +||++|+...|.+.++.++++.. .+.++.|..+... ...|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcc
Confidence 36689999998 99999999999999999998753 3555555554211 12356655
Q ss_pred ------------CcEEEEE-eCCCcccCcccccc---ccCHHHHHHHHHhc
Q 007882 506 ------------FPTILFF-PAGNKSFDPINVDV---DRTVVALYKFLKKN 540 (586)
Q Consensus 506 ------------~Pt~~~~-~~g~~~~~~~~~~g---~~~~~~l~~~i~~~ 540 (586)
+|+++++ ++|+.+. .+.+ ....+++++.|++.
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~---~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQ---AWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEE---EECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccccCcceEEEEECCCCeEEE---EEcCCCcccCHHHHHHHHHHH
Confidence 8999999 4566543 3333 34567888887764
No 444
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.08 E-value=3.1e-06 Score=69.34 Aligned_cols=69 Identities=16% Similarity=0.365 Sum_probs=48.8
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCceEEEEEeCCCcH-------HHHHHcCCCCCcEEE
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDATEEN-------ELAHEYDVQGFPTIY 172 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-------~l~~~~~i~~~Pt~~ 172 (586)
..+++++...+ ++.|+++||++|+.. .+.|.++.. ..+.+..+|++.++ .+.+.+++.++|++
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v- 86 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV------PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI- 86 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC------CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE-
Confidence 45666666554 556999999999999 777765331 13566677776543 57888999999987
Q ss_pred EEeCCee
Q 007882 173 FFVDGQH 179 (586)
Q Consensus 173 ~~~~g~~ 179 (586)
|.+|..
T Consensus 87 -fi~g~~ 92 (118)
T 3c1r_A 87 -YINGKH 92 (118)
T ss_dssp -EETTEE
T ss_pred -EECCEE
Confidence 557754
No 445
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.07 E-value=3.8e-06 Score=76.99 Aligned_cols=88 Identities=11% Similarity=0.099 Sum_probs=63.8
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------------cc
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------------EH 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------------~~ 498 (586)
.++++||+|| ++||++|+...|.|.++.++++. .++.++.|+.+.. ..
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE-RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4678999999 99999999999999999999864 2466666665431 11
Q ss_pred ccCCCC-----cCcEEEEE-eCCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 499 HRAKSD-----GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i~-----~~Pt~~~~-~~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
..|++. .+|+++++ ++|+.+. .+.| .++.++|++.|+...
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQH---LLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 346777 89998888 4566543 2333 346888888887643
No 446
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.06 E-value=7.3e-06 Score=71.96 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred cCCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-------------------------cccCCC
Q 007882 450 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------HHRAKS 503 (586)
Q Consensus 450 ~~~~~~v~f~~~~-C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-------------------------~~~~~i 503 (586)
.+++++|.||++| |++|+...|.+.++.+++ . ++.++.|+.+... ...|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 4689999999999 999999999999999998 3 3555555544211 123555
Q ss_pred Cc------CcEEEEE-eCCCcccCcccccc-----ccCHHHHHHHHHhc
Q 007882 504 DG------FPTILFF-PAGNKSFDPINVDV-----DRTVVALYKFLKKN 540 (586)
Q Consensus 504 ~~------~Pt~~~~-~~g~~~~~~~~~~g-----~~~~~~l~~~i~~~ 540 (586)
.. .|+++++ ++|+.+. ++.| ..+.+++++.|++.
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~---~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVY---AEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEE---EEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEE---EEecCCcCCCCCHHHHHHHHHHh
Confidence 54 4988888 5666653 3332 23557888888764
No 447
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.03 E-value=6.2e-06 Score=61.34 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=46.9
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc--cc---cCCCCcCcEEEEEeCCCcccCccccccccC
Q 007882 455 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HH---RAKSDGFPTILFFPAGNKSFDPINVDVDRT 529 (586)
Q Consensus 455 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~--~~---~~~i~~~Pt~~~~~~g~~~~~~~~~~g~~~ 529 (586)
++.|+++||++|+.+.+.++++ + +.+..+|.+.+. .. .+++.++|++++ +|+. ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~---i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~------~~g-~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G---LAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH------WSG-FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T---CCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE------EES-CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C---CCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE------EcC-CC
Confidence 6779999999999999998864 2 344555555433 23 688999999873 5532 223 56
Q ss_pred HHHHHHHHH
Q 007882 530 VVALYKFLK 538 (586)
Q Consensus 530 ~~~l~~~i~ 538 (586)
.+.|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 778888773
No 448
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.02 E-value=1.5e-05 Score=63.82 Aligned_cols=66 Identities=20% Similarity=0.392 Sum_probs=48.3
Q ss_pred hhHHHHHhCCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH----HHHHcCCCCCcEE
Q 007882 101 RNFSDVIENNKFVMVEFYA-----PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPTI 171 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~ 171 (586)
+.++++++.++ ++| |++ +||++|+...+.|.++ ++.|..+|++.++. +...+++.++|++
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~---------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST---------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH---------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC---------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 45667776664 344 777 9999999999998764 25677788877765 4556799999998
Q ss_pred EEEeCCee
Q 007882 172 YFFVDGQH 179 (586)
Q Consensus 172 ~~~~~g~~ 179 (586)
|.+|..
T Consensus 77 --~i~g~~ 82 (105)
T 2yan_A 77 --YVKGEL 82 (105)
T ss_dssp --EETTEE
T ss_pred --EECCEE
Confidence 457753
No 449
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.00 E-value=1.3e-05 Score=71.03 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=58.2
Q ss_pred cCCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc------------------------ccccCCCC
Q 007882 450 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EHHRAKSD 504 (586)
Q Consensus 450 ~~~~~~v~f~~~~-C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~------------------------~~~~~~i~ 504 (586)
.++++||.||++| |++|+...|.|.++.++ . ++.++.|+.+.. ....|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S---GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T---TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c---CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 4679999999999 99999999999999988 3 355555555411 11346776
Q ss_pred cC---------cEEEEE-eCCCcccCccccc--c---ccCHHHHHHHHHhcC
Q 007882 505 GF---------PTILFF-PAGNKSFDPINVD--V---DRTVVALYKFLKKNA 541 (586)
Q Consensus 505 ~~---------Pt~~~~-~~g~~~~~~~~~~--g---~~~~~~l~~~i~~~~ 541 (586)
.. |+++++ ++|+.+. .+. + ....+++++.+.+.+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~---~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAY---TELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEE---EEECSBTTCCCCHHHHHHHHHHTC
T ss_pred ccccccCCcccceEEEECCCCeEEE---EEECCCcCCCCCHHHHHHHHHhhc
Confidence 66 887777 5666653 332 2 336677777776544
No 450
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.00 E-value=1e-05 Score=70.33 Aligned_cols=69 Identities=10% Similarity=0.127 Sum_probs=49.2
Q ss_pred CcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-----------------------cccCCCCcCc
Q 007882 452 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------HHRAKSDGFP 507 (586)
Q Consensus 452 ~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-----------------------~~~~~i~~~P 507 (586)
+.+||+|| +.||++|+...|.|.++.+++.... .++.|..+... ...|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 46888887 9999999999999999999998644 44444443211 1346777888
Q ss_pred -------EEEEEeCCCcccCcccccc
Q 007882 508 -------TILFFPAGNKSFDPINVDV 526 (586)
Q Consensus 508 -------t~~~~~~g~~~~~~~~~~g 526 (586)
++++ ++|+.+. .+.|
T Consensus 114 ~~g~~~~~~li-~~G~i~~---~~~g 135 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKF---KRVK 135 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEE---EEES
T ss_pred cCCccceEEEE-cCCEEEE---EEcc
Confidence 6666 8887764 4545
No 451
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.00 E-value=1.5e-05 Score=63.44 Aligned_cols=74 Identities=16% Similarity=0.114 Sum_probs=48.7
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc---HHHH----HHcCCCCCcEEEEEeCCeeeeec
Q 007882 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---NELA----HEYDVQGFPTIYFFVDGQHKAYN 183 (586)
Q Consensus 111 ~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~l~----~~~~i~~~Pt~~~~~~g~~~~~~ 183 (586)
+..++.||++||++|++..+.|.+.. ..+..+.||..+. .++. +..++.++|++++ .+| .+.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~-------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~---~~i 89 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG-------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE---KAI 89 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT-------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT---EEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC-------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC---EEE
Confidence 34477799999999999999987642 1334434433211 2232 3468999999865 333 355
Q ss_pred CCCCHHHHHHHH
Q 007882 184 GGRTKDAIVTWI 195 (586)
Q Consensus 184 g~~~~~~l~~~i 195 (586)
|+.+.+.|.++|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 778888888765
No 452
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.00 E-value=3.6e-05 Score=68.06 Aligned_cols=83 Identities=18% Similarity=0.186 Sum_probs=60.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------------- 155 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------------- 155 (586)
+++++|+.|+..|||+|+.+.|.+.++.+++.+.+ +|.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~ 104 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFAT 104 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHc
Confidence 46789999999999999999999999988873222 46555544310
Q ss_pred ---------------------------------cHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHH
Q 007882 156 ---------------------------------ENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIK 196 (586)
Q Consensus 156 ---------------------------------~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~ 196 (586)
...+++++||.++||+++ +|+. +.|..+.+.|.+.|.
T Consensus 105 ~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~~--~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 105 QDEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEYI--FDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTEE--ECTTCCHHHHHHHHT
T ss_pred ChhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCEE--ccCCCCHHHHHHHhc
Confidence 012355679999999654 7863 468888888887764
No 453
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.98 E-value=4.2e-05 Score=68.82 Aligned_cols=41 Identities=24% Similarity=0.381 Sum_probs=34.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (586)
++++|+.||..|||+|..+.|.+.++.+++.+ +|.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 57799999999999999999999999887754 566665543
No 454
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.98 E-value=1.9e-05 Score=67.21 Aligned_cols=81 Identities=23% Similarity=0.425 Sum_probs=61.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC----------------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---------------------------------- 154 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------------------- 154 (586)
+++.+|+.|+.++|++|+++.+.+.++ . ++.+...+.-
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~----~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T----DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C----SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C----ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 478999999999999999999988653 1 3444433211
Q ss_pred ------------CcHHHHHHcCCCCCcEEEEEeCCeeeeecCCCCHHHHHHHHHHhcC
Q 007882 155 ------------EENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 155 ------------~~~~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~ 200 (586)
++..+++++||+++||+++ .+|. ...|..+.+.|.++|.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHHHHHHHHHHHHH
Confidence 1236788899999999998 6776 46798999999999987654
No 455
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.97 E-value=3.1e-05 Score=67.65 Aligned_cols=75 Identities=16% Similarity=0.336 Sum_probs=53.9
Q ss_pred hHHHHHhCCCeEEEEEECCCChhhhh-hhHHHHHHHHHhhcCCCce-EEEEEeCCC-----------------------c
Q 007882 102 NFSDVIENNKFVMVEFYAPWCGHCQA-LAPEYAAAATELKSANESV-VLAKVDATE-----------------------E 156 (586)
Q Consensus 102 ~~~~~~~~~~~~lv~f~a~wC~~C~~-~~p~~~~~~~~~~~~~~~v-~~~~vd~~~-----------------------~ 156 (586)
++.+.+..++.+|+.||+.||+.|.. ++|.|.+.+++++..| + .++.|.++. +
T Consensus 40 sLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~ 117 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGS 117 (176)
T ss_dssp EHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTT
T ss_pred eHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCc
Confidence 34555544446677889999999999 9999999999998744 5 555665542 2
Q ss_pred HHHHHHcCCC-----------CCcEEEEEeCCe
Q 007882 157 NELAHEYDVQ-----------GFPTIYFFVDGQ 178 (586)
Q Consensus 157 ~~l~~~~~i~-----------~~Pt~~~~~~g~ 178 (586)
..+++.||+. ..|+++++++|+
T Consensus 118 ~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~ 150 (176)
T 4f82_A 118 AAFTHALGLTQDLSARGMGIRSLRYAMVIDGGV 150 (176)
T ss_dssp CHHHHHHTCEEECGGGTCCEEECCEEEEEETTE
T ss_pred hHHHHHhCCCccccccCCCcccccEEEEEcCCE
Confidence 3677777763 247777778883
No 456
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.96 E-value=2.1e-05 Score=71.90 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=36.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~ 494 (586)
.++.+||+|||+||++|+ ..|.|+++.+++... .+.++.|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 478999999999999999 899999999999763 4777777643
No 457
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.96 E-value=3e-05 Score=59.89 Aligned_cols=75 Identities=23% Similarity=0.427 Sum_probs=54.8
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHHc-----CCCCCcEEEEEeCCeeeeecCCCC
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEY-----DVQGFPTIYFFVDGQHKAYNGGRT 187 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~-----~i~~~Pt~~~~~~g~~~~~~g~~~ 187 (586)
.++.|+.+||++|++....|.+. ++.|-.+|++.+++..+.+ |.+.+|+++ +.||... +..+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~---------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l---~~~~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN---------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTL---TNPS 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEE---ESCC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc---------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEE---eCCC
Confidence 37779999999999998877641 4777788888876544332 788999975 4677432 2357
Q ss_pred HHHHHHHHHHhcC
Q 007882 188 KDAIVTWIKKKIG 200 (586)
Q Consensus 188 ~~~l~~~i~~~~~ 200 (586)
.+.|.+++.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 7889888887764
No 458
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.96 E-value=9.6e-05 Score=66.72 Aligned_cols=88 Identities=14% Similarity=0.247 Sum_probs=66.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.|+++|++|| +.||+.|..+++.|.+.+.+++.. ++.++.|.++. +.++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~--g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~v 128 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ--GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSL 128 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC--CceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHH
Confidence 5789999999 999999999999999999999873 47777787653 2378
Q ss_pred HHHcCCC------CCcEEEEEe-CCee--ee-e--cCCCCHHHHHHHHHHh
Q 007882 160 AHEYDVQ------GFPTIYFFV-DGQH--KA-Y--NGGRTKDAIVTWIKKK 198 (586)
Q Consensus 160 ~~~~~i~------~~Pt~~~~~-~g~~--~~-~--~g~~~~~~l~~~i~~~ 198 (586)
++.||+- .++.+++++ +|++ .. | ..+++.+++.+.|+..
T Consensus 129 ak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 129 SRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 8889873 467888886 7732 22 2 2356888887777654
No 459
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.95 E-value=3.2e-05 Score=70.40 Aligned_cols=84 Identities=10% Similarity=0.018 Sum_probs=61.4
Q ss_pred CCCeEEEEEECCC-Chhhh-----hhhHHHHHHHHHhhcCCCceEEEEEeCCC-----------------------cHHH
Q 007882 109 NNKFVMVEFYAPW-CGHCQ-----ALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~a~w-C~~C~-----~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l 159 (586)
.++++||+||++| |++|. .+++.|.++ + . ++.++.|+++. +..+
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~---gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~v 119 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-P---HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDF 119 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-T---TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTH
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-C---CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHH
Confidence 5789999999998 99999 888888876 3 2 46777776542 2467
Q ss_pred HHHcCCCC---------CcEEEEEe-CCee-eee-----cCCCCHHHHHHHHHHhc
Q 007882 160 AHEYDVQG---------FPTIYFFV-DGQH-KAY-----NGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 160 ~~~~~i~~---------~Pt~~~~~-~g~~-~~~-----~g~~~~~~l~~~i~~~~ 199 (586)
++.||+.. .|++++++ +|++ ..+ .+..+.+.+.+.|+...
T Consensus 120 ak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 120 HKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp HHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 88888864 79999996 7833 232 23456788888776654
No 460
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.95 E-value=8.7e-06 Score=62.93 Aligned_cols=56 Identities=20% Similarity=0.414 Sum_probs=43.5
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCC--CcHHHHHHc-CCCCCcEEEEEeCCee
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEY-DVQGFPTIYFFVDGQH 179 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~-~i~~~Pt~~~~~~g~~ 179 (586)
.++.|+++||++|+...+.|.+. ++.+..+|++ ....+.+.+ ++.++|+++ .+|..
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~---------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK---------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH---------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc---------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 37779999999999999988764 2556677777 445788888 999999984 47753
No 461
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.94 E-value=9.3e-07 Score=72.15 Aligned_cols=82 Identities=13% Similarity=0.081 Sum_probs=50.8
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-------cccccCCCCcCcEEEEEeCCCcccCccccc
Q 007882 453 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------NEHHRAKSDGFPTILFFPAGNKSFDPINVD 525 (586)
Q Consensus 453 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~-------~~~~~~~i~~~Pt~~~~~~g~~~~~~~~~~ 525 (586)
..++.|+++||++|+.+.+.|+++.... ..+..+.+|.+. .....+++.++|++++ +|+.+. .+.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ig---g~~ 90 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR---GAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIG---GYS 90 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT---TSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEE---SHH
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc---CceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEe---CcH
Confidence 4577899999999999999987653221 125555554443 1124578999998743 666542 222
Q ss_pred c---ccCHHHHHHHHHhcCC
Q 007882 526 V---DRTVVALYKFLKKNAS 542 (586)
Q Consensus 526 g---~~~~~~l~~~i~~~~~ 542 (586)
+ ..+...|.++|.....
T Consensus 91 ~~~~~~~~~~L~~~L~~~g~ 110 (114)
T 2hze_A 91 DLLEIDNMDALGDILSSIGV 110 (114)
T ss_dssp HHHHHHHTTCHHHHHHHTTC
T ss_pred HHHHHHHCChHHHHHHHcCC
Confidence 1 2234567777776543
No 462
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.91 E-value=1.7e-05 Score=64.36 Aligned_cols=66 Identities=20% Similarity=0.443 Sum_probs=45.3
Q ss_pred hhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----cHH----HHHHcCCCCCcEEE
Q 007882 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----ENE----LAHEYDVQGFPTIY 172 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----~~~----l~~~~~i~~~Pt~~ 172 (586)
+.++++++.++ ++.|+++||++|++..+.|.++ ++.+..+|++. .+. +.+.+|+..+|++
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~---------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i- 77 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL---------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV- 77 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc---------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE-
Confidence 44556666665 6669999999999999988763 23344555544 222 4555699999998
Q ss_pred EEeCCee
Q 007882 173 FFVDGQH 179 (586)
Q Consensus 173 ~~~~g~~ 179 (586)
|.+|+.
T Consensus 78 -fi~g~~ 83 (113)
T 3rhb_A 78 -FVCGKH 83 (113)
T ss_dssp -EETTEE
T ss_pred -EECCEE
Confidence 457753
No 463
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.90 E-value=3e-05 Score=69.15 Aligned_cols=30 Identities=23% Similarity=0.445 Sum_probs=28.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHh
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEYAAAATEL 139 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~ 139 (586)
++++||.|++-||++|+++.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 578999999999999999999999999887
No 464
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.90 E-value=2.4e-05 Score=70.15 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=33.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCC
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT 154 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~ 154 (586)
.++++|.||+.|||+|+.+.|.+ .++.+.+.+ ++.|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ---GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT---TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC---CCEEEEEech
Confidence 46889999999999999999987 577766654 5666666654
No 465
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.89 E-value=4e-05 Score=69.12 Aligned_cols=43 Identities=30% Similarity=0.463 Sum_probs=37.1
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 494 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~ 494 (586)
+++++||.||++||++|+.+.|.+.++.+.+.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 467899999999999999999999999998876 5777777764
No 466
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.89 E-value=1.6e-05 Score=71.52 Aligned_cols=42 Identities=26% Similarity=0.484 Sum_probs=35.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 493 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~ 493 (586)
+++.+|+.|+++||++|+.+.|.+.++.+.+.. ++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 467899999999999999999999999998766 566665544
No 467
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.86 E-value=2.2e-05 Score=61.86 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=43.6
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHHHHHH----c-CCCCCcEEEEEeCCee
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHE----Y-DVQGFPTIYFFVDGQH 179 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~----~-~i~~~Pt~~~~~~g~~ 179 (586)
.+..++.|+++||++|++..+.|.+. ++.+..+|++.++..... . +..++|++ |.+|..
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~---------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK---------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH---------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC---------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 34457779999999999999998764 255667788777655443 3 89999987 457753
No 468
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.85 E-value=4.1e-05 Score=70.39 Aligned_cols=88 Identities=11% Similarity=0.109 Sum_probs=62.0
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc------------------------------c
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------------H 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~------------------------------~ 498 (586)
.++++||+|| ++||++|+...|.|.++.+++.. .++.++.|..+... .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN-KNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 4689999999 99999999999999999998864 24666666554311 0
Q ss_pred ccCCC-----CcCcEEEEEe-CCCcccCcccccc----ccCHHHHHHHHHhcC
Q 007882 499 HRAKS-----DGFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 541 (586)
Q Consensus 499 ~~~~i-----~~~Pt~~~~~-~g~~~~~~~~~~g----~~~~~~l~~~i~~~~ 541 (586)
..|++ ..+|+++++. +|+.+. .+.| .++.++|++.|++..
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRH---QTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHh
Confidence 13555 3679999995 565543 2323 357888888887643
No 469
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.84 E-value=8.4e-06 Score=76.19 Aligned_cols=83 Identities=11% Similarity=0.161 Sum_probs=58.8
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCc-----------------------------------
Q 007882 451 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------------- 495 (586)
Q Consensus 451 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~----------------------------------- 495 (586)
.+.+|+.|+++||++|+++.+.+.++.+. + ++.+..+...-
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 45689999999999999999999987764 2 35544433210
Q ss_pred ------cc-----------cccCCCCcCcEEEEEeC-CCcccCccccccccCHHHHHHHHHhcC
Q 007882 496 ------NE-----------HHRAKSDGFPTILFFPA-GNKSFDPINVDVDRTVVALYKFLKKNA 541 (586)
Q Consensus 496 ------~~-----------~~~~~i~~~Pt~~~~~~-g~~~~~~~~~~g~~~~~~l~~~i~~~~ 541 (586)
.. ...++|+++||+++... |+. . .+.|..+.+.|.++|.+..
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~---~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-Q---QAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-E---EEESSCCHHHHHHHTTC--
T ss_pred ccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-E---EecCCCCHHHHHHHHHHHH
Confidence 00 13579999999999863 432 1 5678889999999987654
No 470
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.83 E-value=6e-05 Score=57.99 Aligned_cols=75 Identities=12% Similarity=0.156 Sum_probs=52.0
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCc----HHHHHHcCC-----CCCcEEEEEeCCeeeee
Q 007882 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----NELAHEYDV-----QGFPTIYFFVDGQHKAY 182 (586)
Q Consensus 112 ~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----~~l~~~~~i-----~~~Pt~~~~~~g~~~~~ 182 (586)
..++.|+++||++|++....|.+.. ..+.+..||...+ .++.+.++. .++|++++ +|..+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~-------i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i-- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN-------IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI-- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT-------CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE--
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC-------CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE--
Confidence 3478899999999999988776532 2456666666554 357777788 99999854 77543
Q ss_pred cCCCCHHHHHHHHHHhcC
Q 007882 183 NGGRTKDAIVTWIKKKIG 200 (586)
Q Consensus 183 ~g~~~~~~l~~~i~~~~~ 200 (586)
| ..+.+.+++...+.
T Consensus 73 -~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 73 -G--GFTELKANADKILN 87 (89)
T ss_dssp -E--SHHHHHHTHHHHTT
T ss_pred -e--ChHHHHHHHHHHhc
Confidence 2 35667777766543
No 471
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.81 E-value=7.1e-05 Score=56.56 Aligned_cols=67 Identities=16% Similarity=0.289 Sum_probs=46.6
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcH----HHHHHcCCCCCcEEEEEeCCeeeeecCCCCHH
Q 007882 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----ELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKD 189 (586)
Q Consensus 114 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~i~~~Pt~~~~~~g~~~~~~g~~~~~ 189 (586)
++.|+++||++|+...+.+.+. ++.+..+|++.++ .+.+.+++.++|+++ .+|..+ | ..+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i---~--g~~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK---------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI---G--GYD 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH---------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE---E--SHH
T ss_pred EEEEECCCChhHHHHHHHHHHC---------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE---e--CHH
Confidence 6779999999999999888753 2445566666543 356778999999984 477543 2 235
Q ss_pred HHHHHHH
Q 007882 190 AIVTWIK 196 (586)
Q Consensus 190 ~l~~~i~ 196 (586)
.|.+++.
T Consensus 67 ~i~~~~~ 73 (82)
T 1fov_A 67 DLYALDA 73 (82)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666554
No 472
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.79 E-value=4.7e-05 Score=69.15 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=35.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 493 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~ 493 (586)
.++.+||+|||+||++| ...|.|.++.+++++. .+.++-|.+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~ 78 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPC 78 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEEC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEEC
Confidence 47899999999999999 6889999999999763 477777764
No 473
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.79 E-value=0.00032 Score=59.68 Aligned_cols=108 Identities=12% Similarity=0.207 Sum_probs=83.1
Q ss_pred CeEEeChhhHHHHHhCCCeEEEEEECC-CChhhhhhhHHHHHHHHHhhcCCCceEEEEEeC--CCcHHHHHHcCCCC--C
Q 007882 94 DVVVLKERNFSDVIENNKFVMVEFYAP-WCGHCQALAPEYAAAATELKSANESVVLAKVDA--TEENELAHEYDVQG--F 168 (586)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~lv~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~--~~~~~l~~~~~i~~--~ 168 (586)
-|.++|.++...+...+-+..++++.. --..-..+.+.+.++|+.+++ ++.|+.||. .+...+.+.+|+.. +
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg---ki~Fv~vd~~~~~~~~~l~~fGl~~~~~ 91 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG---KILFAFIDSDHTDNQRILEFFGLKKEEC 91 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT---TCEEEEECTTCGGGHHHHHHTTCCGGGC
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC---ceEEEEEecchHhHHHHHHHcCCCcccC
Confidence 488999999999987776655554443 233355678999999999987 899999998 55567888999986 8
Q ss_pred cEEEEEeC---Ceeeeec-CCCCHHHHHHHHHHhcCCCcc
Q 007882 169 PTIYFFVD---GQHKAYN-GGRTKDAIVTWIKKKIGPGIY 204 (586)
Q Consensus 169 Pt~~~~~~---g~~~~~~-g~~~~~~l~~~i~~~~~~~~~ 204 (586)
|++.++.. +....+. +..+.+.|.+|++..+...+.
T Consensus 92 P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 92 PAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp SEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred CEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 99999874 3334433 788999999999999876653
No 474
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.78 E-value=6.7e-06 Score=74.06 Aligned_cols=44 Identities=18% Similarity=0.354 Sum_probs=39.1
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCCCc
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEE 156 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~ 156 (586)
++++||.||+.||+||+.+.|.| .++.+.+.+ ++.|..++.+.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~---~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE---GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT---TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC---CCEEEEeccCcC
Confidence 57899999999999999999999 999888865 789999998764
No 475
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.78 E-value=5.4e-05 Score=67.19 Aligned_cols=101 Identities=7% Similarity=-0.021 Sum_probs=64.6
Q ss_pred eEEEeCcchhHHhhccCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc---------------
Q 007882 435 VKIVVGNNFDEIVLDESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--------------- 498 (586)
Q Consensus 435 v~~l~~~~f~~~v~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~--------------- 498 (586)
+...+++.+.-.-. .++++||+|| +.||++|....|.|.++.++++.. .+.++.|..+....
T Consensus 36 l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l 113 (179)
T 3ixr_A 36 LMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLV 113 (179)
T ss_dssp EEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred EECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEE
Confidence 33444443332222 3668888888 999999999999999999999763 46666666553211
Q ss_pred --------ccCCCCc------------CcEEEEE-eCCCcccCcccccc---ccCHHHHHHHHHhc
Q 007882 499 --------HRAKSDG------------FPTILFF-PAGNKSFDPINVDV---DRTVVALYKFLKKN 540 (586)
Q Consensus 499 --------~~~~i~~------------~Pt~~~~-~~g~~~~~~~~~~g---~~~~~~l~~~i~~~ 540 (586)
..|++.. .|+++++ ++|+.+. .+.+ ....+++++.|++.
T Consensus 114 ~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~---~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 114 SDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVE---AWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp ECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEE---EECSCCSTTHHHHHHHHHHHH
T ss_pred ECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEE---EEcCCCCCCCHHHHHHHHHHH
Confidence 1244432 5888888 4566543 2333 34567787777653
No 476
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.76 E-value=0.00017 Score=64.19 Aligned_cols=86 Identities=16% Similarity=0.333 Sum_probs=63.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEE--eCCCcH-----------------------------
Q 007882 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKV--DATEEN----------------------------- 157 (586)
Q Consensus 109 ~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~v--d~~~~~----------------------------- 157 (586)
.++++||.|+.-.||+|+++.|.+.++.+++.+ ++.+..+ .....+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 96 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE---GAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRI 96 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC---ceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 357889999999999999999999999988766 3444443 321111
Q ss_pred --------------------------------------------HHHHHcCCCCCcEEEEEeCCe-eeeecCCCCHHHHH
Q 007882 158 --------------------------------------------ELAHEYDVQGFPTIYFFVDGQ-HKAYNGGRTKDAIV 192 (586)
Q Consensus 158 --------------------------------------------~l~~~~~i~~~Pt~~~~~~g~-~~~~~g~~~~~~l~ 192 (586)
.+++++||+++||+++ ||+ .+...|..+.+.+.
T Consensus 97 ~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~ 174 (184)
T 4dvc_A 97 HTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYF 174 (184)
T ss_dssp HTSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHH
T ss_pred HHHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHH
Confidence 5667799999999765 885 44556677888888
Q ss_pred HHHHHhc
Q 007882 193 TWIKKKI 199 (586)
Q Consensus 193 ~~i~~~~ 199 (586)
+.|+.++
T Consensus 175 ~~i~~Ll 181 (184)
T 4dvc_A 175 DLVNYLL 181 (184)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8777655
No 477
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.73 E-value=7.2e-06 Score=68.48 Aligned_cols=88 Identities=9% Similarity=0.139 Sum_probs=51.5
Q ss_pred chhHHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-c------cccCCCCcCcEEEEEeC
Q 007882 442 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-E------HHRAKSDGFPTILFFPA 514 (586)
Q Consensus 442 ~f~~~v~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-~------~~~~~i~~~Pt~~~~~~ 514 (586)
.+.+.+ ... . ++.|+++||++|+.+.+.|.++. ..+..+.+|...+ . ...+++.++|+++ .+
T Consensus 19 ~~~~~i-~~~-~-vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i~ 87 (130)
T 2cq9_A 19 QIQETI-SDN-C-VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VN 87 (130)
T ss_dssp HHHHHH-HHS-S-EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--ET
T ss_pred HHHHHH-cCC-c-EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--EC
Confidence 445544 222 3 44499999999999999998863 1344455554411 1 2457899999984 46
Q ss_pred CCcccCccccccccCHHHHHHHHHhc
Q 007882 515 GNKSFDPINVDVDRTVVALYKFLKKN 540 (586)
Q Consensus 515 g~~~~~~~~~~g~~~~~~l~~~i~~~ 540 (586)
|+.+...-...+......|.++|...
T Consensus 88 G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 88 GTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp TEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 66542100111223445677777664
No 478
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.71 E-value=6.6e-05 Score=68.51 Aligned_cols=87 Identities=8% Similarity=0.040 Sum_probs=61.6
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc------------------------------
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 498 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~------------------------------ 498 (586)
.++++||+|| ++||++|+...|.|.++.++++. .++.++.|..+....
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH
Confidence 3679999999 99999999999999999999875 346666665543110
Q ss_pred ccCCCC------cCcEEEEEe-CCCcccCcccccc----ccCHHHHHHHHHhc
Q 007882 499 HRAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKN 540 (586)
Q Consensus 499 ~~~~i~------~~Pt~~~~~-~g~~~~~~~~~~g----~~~~~~l~~~i~~~ 540 (586)
..|++. .+|+++++. +|+.+. .+.| .++.+++++.|+..
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQ---ITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 124553 589999995 555542 2223 35778888888764
No 479
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.68 E-value=9.9e-06 Score=68.94 Aligned_cols=78 Identities=9% Similarity=0.121 Sum_probs=47.4
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcc-c------cccCCCCcCcEEEEEeCCCcccCccccccc
Q 007882 455 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-E------HHRAKSDGFPTILFFPAGNKSFDPINVDVD 527 (586)
Q Consensus 455 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~-~------~~~~~i~~~Pt~~~~~~g~~~~~~~~~~g~ 527 (586)
++.|+++||++|+.+.+.|+++.- .+..+.+|...+ . ...+++.++|+++ .+|+.+...-...+.
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~i------~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i~G~~igG~d~l~~l 122 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMNV------NYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFIGGATDTHRL 122 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC------CCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--ETTEEEESHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHcCC------CeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--ECCEEEeCchHHHHH
Confidence 444999999999999999988631 344555554411 1 2457899999984 477654210011122
Q ss_pred cCHHHHHHHHHhc
Q 007882 528 RTVVALYKFLKKN 540 (586)
Q Consensus 528 ~~~~~l~~~i~~~ 540 (586)
.....|.++|...
T Consensus 123 ~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 123 HKEGKLLPLVHQC 135 (146)
T ss_dssp HHTTCHHHHHHHT
T ss_pred HHcChHHHHHHHc
Confidence 2334566777654
No 480
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.68 E-value=0.00011 Score=59.65 Aligned_cols=66 Identities=17% Similarity=0.385 Sum_probs=46.1
Q ss_pred hhhHHHHHhCCCeEEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC--c-----HHHHHHcCCCCCcEEE
Q 007882 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--E-----NELAHEYDVQGFPTIY 172 (586)
Q Consensus 100 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~-----~~l~~~~~i~~~Pt~~ 172 (586)
.+.++++++.++ ++.|+++|||+|++..+.|.++ ++.+-.+|++. + ..+.+..|...+|+++
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~---------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vf 75 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL---------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIF 75 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc---------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEE
Confidence 356677777665 4449999999999999888763 24455556553 2 2355677899999985
Q ss_pred EEeCCe
Q 007882 173 FFVDGQ 178 (586)
Q Consensus 173 ~~~~g~ 178 (586)
+ +|.
T Consensus 76 i--~g~ 79 (114)
T 3h8q_A 76 V--NKV 79 (114)
T ss_dssp E--TTE
T ss_pred E--CCE
Confidence 5 775
No 481
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.66 E-value=3.2e-05 Score=64.28 Aligned_cols=72 Identities=14% Similarity=0.381 Sum_probs=47.6
Q ss_pred hhhHHHHHhCCCeEEEEEECCCChhhhhh-hHHHHHHHHHhhcCCCceEEEEEeCCCc-----HHHHHHcCCCCCcEEEE
Q 007882 100 ERNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQGFPTIYF 173 (586)
Q Consensus 100 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~l~~~~~i~~~Pt~~~ 173 (586)
.+.+++.+...+ ++.|+.+||++|++. .+.|.++... ...+.++.||.+.+ ..+.+.+|+..+|++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v-- 98 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV-- 98 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--
Confidence 455666776555 677999999999999 7777653311 02344444444332 357788899999996
Q ss_pred EeCCee
Q 007882 174 FVDGQH 179 (586)
Q Consensus 174 ~~~g~~ 179 (586)
|.+|..
T Consensus 99 fi~g~~ 104 (129)
T 3ctg_A 99 YINGKH 104 (129)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 557753
No 482
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.66 E-value=9.4e-05 Score=72.04 Aligned_cols=85 Identities=13% Similarity=0.189 Sum_probs=62.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC---------------------cHHHHHHcCCC
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------ENELAHEYDVQ 166 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~i~ 166 (586)
.|+++||+|| +.||+.|..+++.|.+. . ..++.+++|+++. +..+++.|||.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~--~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~ 96 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE----N--FEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVL 96 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS----C--CTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH----h--hCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCC
Confidence 6899999999 67999999998888541 1 2358888888753 23788889883
Q ss_pred ----CCcEEEEEe-CCe-eeeecC---CCCHHHHHHHHHHhc
Q 007882 167 ----GFPTIYFFV-DGQ-HKAYNG---GRTKDAIVTWIKKKI 199 (586)
Q Consensus 167 ----~~Pt~~~~~-~g~-~~~~~g---~~~~~~l~~~i~~~~ 199 (586)
.+|++++++ +|. ...|.+ ..+.+.+.++++++.
T Consensus 97 ~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 97 ENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp ETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred CCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 578999996 883 334544 345688888888775
No 483
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.66 E-value=0.00049 Score=60.32 Aligned_cols=89 Identities=11% Similarity=0.183 Sum_probs=67.2
Q ss_pred hCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEeCCCcH---------------HHHH---HcCCC
Q 007882 108 ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEEN---------------ELAH---EYDVQ 166 (586)
Q Consensus 108 ~~~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~---------------~l~~---~~~i~ 166 (586)
+++|+++|+++++||..|..+.... ..+.+-++. ++.+...|.+... .++. .+++.
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~---nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~ 129 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ---NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTD 129 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH---TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCST
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc---CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCC
Confidence 3579999999999999999887432 234445555 6899999988754 3443 38999
Q ss_pred CCcEEEEEe-CC----eeeeecCCCCHHHHHHHHHHhc
Q 007882 167 GFPTIYFFV-DG----QHKAYNGGRTKDAIVTWIKKKI 199 (586)
Q Consensus 167 ~~Pt~~~~~-~g----~~~~~~g~~~~~~l~~~i~~~~ 199 (586)
++|++.++. .| ...+..|..+.+.+.+.+...+
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999994 32 3467889999999888876554
No 484
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.65 E-value=7.1e-05 Score=58.07 Aligned_cols=56 Identities=21% Similarity=0.416 Sum_probs=41.7
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH----HHHHcCCCCCcEEEEEeCCee
Q 007882 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPTIYFFVDGQH 179 (586)
Q Consensus 113 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~~~~~~g~~ 179 (586)
.++.|+++||++|+...+.|.+. ++.|..+|++.++. +.+.+++.++|++ +.+|..
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~---------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK---------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT---------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc---------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 37789999999999998888753 25566778776643 4557899999975 457753
No 485
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.65 E-value=8.8e-05 Score=66.22 Aligned_cols=88 Identities=9% Similarity=-0.024 Sum_probs=61.1
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc---------------------------ccC
Q 007882 450 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------------------------HRA 501 (586)
Q Consensus 450 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~---------------------------~~~ 501 (586)
.++++||+||+ +||++|+...|.|.++.++++. .++.++.|..+.... ..|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQK-LGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH-TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHh
Confidence 36899999995 9999999999999999998875 346666666543110 124
Q ss_pred CCC------cCcEEEEEe-CCCcccCccccccc----cCHHHHHHHHHhcC
Q 007882 502 KSD------GFPTILFFP-AGNKSFDPINVDVD----RTVVALYKFLKKNA 541 (586)
Q Consensus 502 ~i~------~~Pt~~~~~-~g~~~~~~~~~~g~----~~~~~l~~~i~~~~ 541 (586)
++. ..|+++++. +|+.+. .+.|. ++.++|.+.|+...
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQA---IEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 444 369999995 565543 33332 36888888887654
No 486
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.62 E-value=0.00018 Score=63.17 Aligned_cols=90 Identities=9% Similarity=0.078 Sum_probs=62.3
Q ss_pred CCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCcccc------------------------------
Q 007882 451 SKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH------------------------------ 498 (586)
Q Consensus 451 ~~~~~v~f~~~~C~-~C~~~~~~~~~~~~~~~~~-~~i~~~~id~~~~~~------------------------------ 498 (586)
+++++|+||++||+ .|....+.+.++.+.+... .++.++.|..+..+.
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 6999999999999998632 245555554431000
Q ss_pred ---ccCC---------CCcCcEEEEE-eCCCcccCcccccc-ccCHHHHHHHHHhcCCC
Q 007882 499 ---HRAK---------SDGFPTILFF-PAGNKSFDPINVDV-DRTVVALYKFLKKNASI 543 (586)
Q Consensus 499 ---~~~~---------i~~~Pt~~~~-~~g~~~~~~~~~~g-~~~~~~l~~~i~~~~~~ 543 (586)
..++ +...|+++++ ++|+.+. .+.| ..+.++|.+.|.+.+..
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~---~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKD---YIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEE---EEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEE---EEeCCCCCHHHHHHHHHHhhcc
Confidence 1112 3455778888 4566542 4566 46899999999987753
No 487
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.57 E-value=0.00016 Score=67.35 Aligned_cols=87 Identities=8% Similarity=0.083 Sum_probs=61.8
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc------------------------------
Q 007882 450 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 498 (586)
Q Consensus 450 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~------------------------------ 498 (586)
.++++||+||+ .||++|....|.|.++.++++.. ++.++.|..+....
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 36899999999 99999999999999999999763 46666666553211
Q ss_pred ccCCCC------cCcEEEEEe-CCCcccCcccccc----ccCHHHHHHHHHhc
Q 007882 499 HRAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKN 540 (586)
Q Consensus 499 ~~~~i~------~~Pt~~~~~-~g~~~~~~~~~~g----~~~~~~l~~~i~~~ 540 (586)
..|++. .+|+++++. +|+.+. .+.+ .++.+++++.|+..
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~---~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQ---ITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 125555 589999884 555542 2222 45778888888753
No 488
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.55 E-value=7.4e-05 Score=69.59 Aligned_cols=87 Identities=11% Similarity=0.083 Sum_probs=61.0
Q ss_pred cCCc-EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc-----------------------------cc
Q 007882 450 ESKD-VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------------HH 499 (586)
Q Consensus 450 ~~~~-~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~-----------------------------~~ 499 (586)
.++. +|++||++||+.|....+.|.++...++.. ++.++.++++... ..
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVAR 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHH
Confidence 3554 566789999999999999999999998753 4777777665311 12
Q ss_pred cCCCC-------cCcEEEEEe-CCCcccCcccccc----ccCHHHHHHHHHhc
Q 007882 500 RAKSD-------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKN 540 (586)
Q Consensus 500 ~~~i~-------~~Pt~~~~~-~g~~~~~~~~~~g----~~~~~~l~~~i~~~ 540 (586)
.|++. .+|+++++. +|+.+. .+.| .++.++|++.|+..
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~---~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRT---MLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEE---EEecCCcccchhHHHHHHHHHH
Confidence 35665 899988884 565542 2222 36889999888753
No 489
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.55 E-value=1.4e-05 Score=65.45 Aligned_cols=59 Identities=14% Similarity=0.324 Sum_probs=38.0
Q ss_pred EEEEeCCCChhhhhh-hHHHHHHHHHhcCCCcEEEEEEeCCcc-------ccccCCCCcCcEEEEEeCCCcc
Q 007882 455 LLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTTN-------EHHRAKSDGFPTILFFPAGNKS 518 (586)
Q Consensus 455 ~v~f~~~~C~~C~~~-~~~~~~~~~~~~~~~~i~~~~id~~~~-------~~~~~~i~~~Pt~~~~~~g~~~ 518 (586)
++.|+++||++|+.+ .+.|.++.. ....+..+.+|.+.+ ....+++.++|++ |.+|+.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 666999999999999 887766431 111344444444332 1245788999986 5577654
No 490
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.54 E-value=0.00012 Score=68.36 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=59.2
Q ss_pred cCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHhcCCCcE-EEEEEeCCcccc------------------------ccCC
Q 007882 450 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSI-VIAKMDGTTNEH------------------------HRAK 502 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~-~~~~~~~~~~~~~~~~~~i-~~~~id~~~~~~------------------------~~~~ 502 (586)
.++++||+|| ++||++|+ ...|.|.++.+.++.. ++ .++.|+.+.... ..|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhC
Confidence 4678999998 99999999 9999999999988653 35 555555543110 1244
Q ss_pred CC-----------cCcEEEEEeCCCcccCccccccc---------cCHHHHHHHHHhc
Q 007882 503 SD-----------GFPTILFFPAGNKSFDPINVDVD---------RTVVALYKFLKKN 540 (586)
Q Consensus 503 i~-----------~~Pt~~~~~~g~~~~~~~~~~g~---------~~~~~l~~~i~~~ 540 (586)
+. ..|+.+++++|+.+. .+.|. .+.+++++.|...
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~i~~---~~~~~~~~~~~~~~~~~~~il~~l~~~ 165 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGVVEK---MFIEPNEPGDPFKVSDADTMLKYLAPQ 165 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEEE---EEECCSCSSCCCSSSSHHHHHHHHCTT
T ss_pred ceeecccccCcccceeEEEEEECCEEEE---EEEeccCCCccceecCHHHHHHHhhhh
Confidence 43 347666667777653 23331 5788888888754
No 491
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.53 E-value=0.00018 Score=55.45 Aligned_cols=75 Identities=20% Similarity=0.332 Sum_probs=52.1
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc--c---c--CCCCcCcEEEEEeCCCcccCcccccc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---R--AKSDGFPTILFFPAGNKSFDPINVDV 526 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~--~---~--~~i~~~Pt~~~~~~g~~~~~~~~~~g 526 (586)
-|+.|.++||++|+++...|++. ++.|-.+|++.+.. + + -+.+++|++++ .+|... +
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~l-------~ 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGSTL-------T 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCEE-------E
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEEE-------e
Confidence 46779999999999999888762 25556666665442 1 1 26789999754 555442 2
Q ss_pred ccCHHHHHHHHHhcCCCC
Q 007882 527 DRTVVALYKFLKKNASIP 544 (586)
Q Consensus 527 ~~~~~~l~~~i~~~~~~~ 544 (586)
..+..+|.++|.+.++.+
T Consensus 69 ~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 69 NPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp SCCHHHHHHHHHHHHCCS
T ss_pred CCCHHHHHHHHHHhcCCc
Confidence 357889999998876543
No 492
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.52 E-value=3.6e-05 Score=59.36 Aligned_cols=55 Identities=20% Similarity=0.342 Sum_probs=38.5
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc----cccC-CCCcCcEEEEEeCCCcc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----HHRA-KSDGFPTILFFPAGNKS 518 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~----~~~~-~i~~~Pt~~~~~~g~~~ 518 (586)
.++.|+++||++|+.+.+.+++.. +.+..+|++... ...+ ++.++|+++ .+|+.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~--------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i 66 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG--------VKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV 66 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT--------CCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC
T ss_pred eEEEEECCCChhHHHHHHHHHHcC--------CCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE
Confidence 477899999999999999998752 334555655111 2456 899999974 366543
No 493
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.50 E-value=5.2e-05 Score=65.62 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=52.5
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCcccc-----------------------ccCCCC-
Q 007882 450 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSD- 504 (586)
Q Consensus 450 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~~-----------------------~~~~i~- 504 (586)
.++.++|.|| ++||++|+...|.+.++.+++... .+.++.+..+.... ..|++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcc
Confidence 4678999998 999999999999999998888653 45666665543221 123332
Q ss_pred ----------cCcEEEEE-eCCCcccCcc--ccccccCHHHHHHHHHh
Q 007882 505 ----------GFPTILFF-PAGNKSFDPI--NVDVDRTVVALYKFLKK 539 (586)
Q Consensus 505 ----------~~Pt~~~~-~~g~~~~~~~--~~~g~~~~~~l~~~i~~ 539 (586)
..|+++++ ++|+.+...+ ...+..+.++|++.|+.
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 45777777 4555432111 11245578889888865
No 494
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.50 E-value=6.5e-05 Score=58.29 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=47.8
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc---------cccCCCCcCcEEEEEeCCCcccCcccc
Q 007882 454 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------HHRAKSDGFPTILFFPAGNKSFDPINV 524 (586)
Q Consensus 454 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~---------~~~~~i~~~Pt~~~~~~g~~~~~~~~~ 524 (586)
.++.|+++||++|+++.+.++++. ..+..+.++..... ...+++.++|++++ +|+. .
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~------i 78 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH------V 78 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE------E
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE------E
Confidence 367799999999999999988763 13445555532211 13457889999876 5532 2
Q ss_pred ccccCHHHHHHHHH
Q 007882 525 DVDRTVVALYKFLK 538 (586)
Q Consensus 525 ~g~~~~~~l~~~i~ 538 (586)
+..+.+.|.++|.
T Consensus 79 -~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 -LGYNEEKLKELIR 91 (92)
T ss_dssp -ESCCHHHHHHHHH
T ss_pred -eCCCHHHHHHHhc
Confidence 3358899999885
No 495
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.43 E-value=0.0003 Score=62.88 Aligned_cols=40 Identities=18% Similarity=0.422 Sum_probs=31.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhhcCCCceEEEEEe
Q 007882 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVD 152 (586)
Q Consensus 110 ~~~~lv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd 152 (586)
++++||.|+.-|||+|+++.|.+ .++.+.+.+ ++.|..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~---~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE---GTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT---TCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC---CcEEEEEe
Confidence 46889999999999999999986 688888765 34444444
No 496
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.43 E-value=0.00027 Score=56.76 Aligned_cols=65 Identities=17% Similarity=0.347 Sum_probs=47.3
Q ss_pred hhHHHHHhCCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCCcHH----HHHHcCCCCCcEE
Q 007882 101 RNFSDVIENNKFVMVEFYA-----PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPTI 171 (586)
Q Consensus 101 ~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~i~~~Pt~ 171 (586)
+.++.++..++ ++.|+. +||++|++..+.|.+. ++.+..+|++.++. +.+..+...+|++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~---------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST---------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT---------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc---------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 45777787665 444666 9999999999888653 36678888887754 4455688999985
Q ss_pred EEEeCCe
Q 007882 172 YFFVDGQ 178 (586)
Q Consensus 172 ~~~~~g~ 178 (586)
|.+|.
T Consensus 75 --fi~g~ 79 (109)
T 1wik_A 75 --YVRGD 79 (109)
T ss_dssp --ECSSS
T ss_pred --EECCE
Confidence 55774
No 497
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.38 E-value=0.0011 Score=59.83 Aligned_cols=88 Identities=14% Similarity=0.314 Sum_probs=65.0
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhhcCCCceEEEEEeCCC----------------------------cHHH
Q 007882 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (586)
Q Consensus 109 ~~~~~lv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l 159 (586)
.|+++|++|| +.||+.|..+...|.+.+.+++.. ++.++.|.++. +..+
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~--g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~v 132 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL--NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNI 132 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC--CcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHH
Confidence 5789999999 999999999999999999999884 57777777653 2368
Q ss_pred HHHcCCC----CC--cEEEEEe-CCee-ee--e--cCCCCHHHHHHHHHHh
Q 007882 160 AHEYDVQ----GF--PTIYFFV-DGQH-KA--Y--NGGRTKDAIVTWIKKK 198 (586)
Q Consensus 160 ~~~~~i~----~~--Pt~~~~~-~g~~-~~--~--~g~~~~~~l~~~i~~~ 198 (586)
++.||+- ++ -.+++++ +|++ .. | ...++.+++.+.|+..
T Consensus 133 a~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 133 ARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 8889873 23 3677775 7732 21 2 2356778887777654
No 498
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.37 E-value=0.00032 Score=63.08 Aligned_cols=41 Identities=29% Similarity=0.542 Sum_probs=33.9
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEe
Q 007882 450 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD 492 (586)
Q Consensus 450 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id 492 (586)
+.+.+|+.|+++||++|+.+.|.+.++.+.+.. ++.+..+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p 61 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEH 61 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEec
Confidence 356789999999999999999999999998765 46555554
No 499
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.37 E-value=0.0007 Score=60.03 Aligned_cols=41 Identities=27% Similarity=0.545 Sum_probs=33.8
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEE
Q 007882 451 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKM 491 (586)
Q Consensus 451 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~i 491 (586)
++++||.|+.-.||+|+.+.+.+.++.+.+.....+.+..+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 56899999999999999999999999998876445555443
No 500
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.37 E-value=0.00022 Score=56.55 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=48.4
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCccc----c-c----cCCCCcCcEEEEEeCCCcccCc
Q 007882 451 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----H-H----RAKSDGFPTILFFPAGNKSFDP 521 (586)
Q Consensus 451 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~i~~~~id~~~~~----~-~----~~~i~~~Pt~~~~~~g~~~~~~ 521 (586)
....+++|+++||++|+++++.+++..- .+..+.+|..... . . ..++.++|++++ +|..
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~i------~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~---- 87 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLGV------DFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK---- 87 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHTB------CEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE----
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC------CcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE----
Confidence 3455777999999999999999987631 2445555542211 1 1 247899999876 3312
Q ss_pred cccccccCHHHHHHHH
Q 007882 522 INVDVDRTVVALYKFL 537 (586)
Q Consensus 522 ~~~~g~~~~~~l~~~i 537 (586)
+.|..+.++|.++|
T Consensus 88 --~igg~~~~~l~~~L 101 (103)
T 3nzn_A 88 --AIVGFKEKEIRESL 101 (103)
T ss_dssp --EEESCCHHHHHHHT
T ss_pred --EEEcCCHHHHHHHh
Confidence 34567888888776
Done!