BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007886
(586 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q06801|DPEP_SOLTU 4-alpha-glucanotransferase, chloroplastic/amyloplastic OS=Solanum
tuberosum GN=DPEP PE=1 SV=1
Length = 576
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/576 (74%), Positives = 487/576 (84%), Gaps = 7/576 (1%)
Query: 11 SLASSSSSSPKPSSFLATATLRPRFFLCTPFAAKTSAASASCSSVSGNAAASAVASVGQD 70
SL SS SSPK T P L P T S +G AA V +VG+D
Sbjct: 8 SLIPSSFSSPKLPYPKNTTFQSPIPKLSRP----TFMFDRKGSFQNGTAA---VPAVGED 60
Query: 71 LPDDYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVL 130
P DY +W PK DP DRRRAG+LLHPTSF GPYGIGD G +AF+F+DWLH AGCS+WQVL
Sbjct: 61 FPIDYADWLPKRDPNDRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCSLWQVL 120
Query: 131 PLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVA 190
PLVPPG++ NE+GSPYSGQDANCGNTLLISLEELV DGLL ELP+P+ +RVN++ ++
Sbjct: 121 PLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKMEELPEPLPTDRVNYSTIS 180
Query: 191 DLKDPLIAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWP 250
++KDPLI KAA+RL+ S+GELK QLENF +DP+ISSWLEDAAYFAAID+S+NT SWY WP
Sbjct: 181 EIKDPLITKAAKRLLSSEGELKDQLENFRRDPNISSWLEDAAYFAAIDNSVNTISWYDWP 240
Query: 251 ESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGY 310
E LKNRHLAALEE+YQS+KDFID+FIAQQFLFQRQW+KVR+YA+ KGISIMGDMPIYVGY
Sbjct: 241 EPLKNRHLAALEEVYQSEKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMPIYVGY 300
Query: 311 HSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRI 370
HSADVWANKK FLLNR+GFPL VSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWW+ RI
Sbjct: 301 HSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWVRRI 360
Query: 371 RRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAE 430
+RA DL+DEFRIDHFRGFAGFWAVPSE K+A+ GRWKVGPGK LFDAI ++VG INIIAE
Sbjct: 361 QRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKINIIAE 420
Query: 431 DLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSW 490
DLGVITEDVVQLRKSI APGMAVLQF FGSD++NPHLPHNHE+NQVVYTGTHDNDTIR W
Sbjct: 421 DLGVITEDVVQLRKSIEAPGMAVLQFAFGSDAENPHLPHNHEQNQVVYTGTHDNDTIRGW 480
Query: 491 WDTSKNEEKSNVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPA 550
WDT EEKSNV+KYLS EE++IS LI+ A+SSVA+ A+IP+QD+L LG +RMNIPA
Sbjct: 481 WDTLPQEEKSNVLKYLSNIEEEEISRGLIEGAVSSVARIAIIPMQDVLGLGSDSRMNIPA 540
Query: 551 TQFGNWSWRIPSSTSFDRLETEATKLRDLLSTYGRL 586
TQFGNWSWRIPSSTSFD L+ EA KLRD+L+TYGRL
Sbjct: 541 TQFGNWSWRIPSSTSFDNLDAEAKKLRDILATYGRL 576
>sp|Q9LV91|DPE1_ARATH 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=DPE1 PE=2 SV=1
Length = 576
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/565 (73%), Positives = 466/565 (82%), Gaps = 13/565 (2%)
Query: 22 PSSFLATATLRPRFFLCTPFAAKTSAASASCSSVSGNAAASAVASVGQDLPDDYEEWTPK 81
P S + A LR R F + +++++C S SVG+D P +YE+W P
Sbjct: 25 PDSLIDAAVLRNRTKPSQSFRMEVVSSNSTCLSS---------ISVGEDFPSEYEQWLPV 75
Query: 82 PDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANE 141
PDP RRRAGVLLHPTSFRGP+GIGD G EAFRFIDWLH GCSVWQVLPLVPP +E
Sbjct: 76 PDPESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPP----DE 131
Query: 142 EGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAA 201
GSPY+GQDANCGNTLLISL+ELVKDGLL K ELPQPIDA+ VN+ LK PLI KAA
Sbjct: 132 GGSPYAGQDANCGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAA 191
Query: 202 ERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAAL 261
+RLI +GELKS+L +F DPSIS WLEDAAYFAAID++LN +SW+ WPE LKNRHL+AL
Sbjct: 192 KRLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSAL 251
Query: 262 EEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKH 321
E IY+S+K+FIDLFIA+QFLFQRQWQKVR YA+ +G+ IMGDMPIYVGYHSADVWANKKH
Sbjct: 252 EAIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKH 311
Query: 322 FLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFR 381
FLLN++GFPL VSGVPPD FSETGQLWGSPLYDWKAME D +SWW++RIRRA+DLYDE R
Sbjct: 312 FLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECR 371
Query: 382 IDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQ 441
IDHFRGFAGFWAVPSEAKVAM GRWKVGPGKSLFDAI + VG I IIAEDLGVIT+DVV+
Sbjct: 372 IDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVE 431
Query: 442 LRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSN 501
LRKSIGAPGMAVLQF FG + NPHLPHNHE NQVVY+GTHDNDTIR WWDT EEKS
Sbjct: 432 LRKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTIRGWWDTLDQEEKSK 491
Query: 502 VMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIP 561
MKYLSI+ EDDISW +IQAA SS AQTA+IP+QDIL LG SARMN PAT+ GNW WRIP
Sbjct: 492 AMKYLSIAGEDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIP 551
Query: 562 SSTSFDRLETEATKLRDLLSTYGRL 586
SSTSFD LETE+ +LRDLLS YGRL
Sbjct: 552 SSTSFDNLETESDRLRDLLSLYGRL 576
>sp|Q8LI30|DPE1_ORYSJ 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=DPE1 PE=2 SV=2
Length = 594
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/520 (70%), Positives = 421/520 (80%)
Query: 67 VGQDLPDDYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSV 126
VG++LP+ Y++ P + RRRAGVLLHPTS RGP+GIGD G EA F+ WL AGC++
Sbjct: 75 VGEELPEGYDQMMPAVEEARRRRAGVLLHPTSLRGPHGIGDLGDEAVAFLAWLRDAGCTL 134
Query: 127 WQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNF 186
WQVLPLVPPGRK+ E+GSPYSGQDANCGNTLLISLEELVKDGLL + ELP P+D E V F
Sbjct: 135 WQVLPLVPPGRKSGEDGSPYSGQDANCGNTLLISLEELVKDGLLMENELPDPLDMEYVEF 194
Query: 187 AAVADLKDPLIAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSW 246
VA+LK+PLIAKAAERL+ S GEL++Q + F K+P+IS WLEDAA FAAID S++ SW
Sbjct: 195 DTVANLKEPLIAKAAERLLLSRGELRTQYDCFKKNPNISGWLEDAALFAAIDRSIDALSW 254
Query: 247 YLWPESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPI 306
Y WPE LKNRHL ALE+IYQ +KDFI++F+AQQFLFQRQWQ++R YA+ GISIMGDMPI
Sbjct: 255 YEWPEPLKNRHLRALEDIYQKQKDFIEIFMAQQFLFQRQWQRIRKYAKKLGISIMGDMPI 314
Query: 307 YVGYHSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWW 366
YVGYHSADVWAN+K FLL++ GFP VSGVPPDAFSETGQLW SPLYDWKAME GF WW
Sbjct: 315 YVGYHSADVWANRKSFLLDKNGFPTFVSGVPPDAFSETGQLWNSPLYDWKAMEAGGFEWW 374
Query: 367 IHRIRRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNIN 426
I RI RA DLYDEFRIDHFRG AGFWAVPSE+KVA+ G W+ GP + FDA+F++VG IN
Sbjct: 375 IKRINRALDLYDEFRIDHFRGLAGFWAVPSESKVALVGSWRAGPRNAFFDALFKAVGRIN 434
Query: 427 IIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDT 486
IIAEDLGVITEDVV LRKSI APGMAVLQF FG S NPHLPHNHE +QVVYTGTHDNDT
Sbjct: 435 IIAEDLGVITEDVVDLRKSIEAPGMAVLQFAFGGGSDNPHLPHNHEFDQVVYTGTHDNDT 494
Query: 487 IRSWWDTSKNEEKSNVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARM 546
+ WW T EEK V KYL + +ISW LI AALSSVA+T+++ +QDIL L SARM
Sbjct: 495 VIGWWQTLPEEEKQTVFKYLPEANRTEISWALITAALSSVARTSMVTMQDILGLDSSARM 554
Query: 547 NIPATQFGNWSWRIPSSTSFDRLETEATKLRDLLSTYGRL 586
N PATQ GNW WR+PSS SFD L EA KL++LL Y RL
Sbjct: 555 NTPATQKGNWRWRMPSSVSFDSLSPEAAKLKELLGLYNRL 594
>sp|Q59266|MALQ_CLOBU 4-alpha-glucanotransferase OS=Clostridium butyricum GN=malQ PE=1
SV=1
Length = 487
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/497 (41%), Positives = 291/497 (58%), Gaps = 17/497 (3%)
Query: 94 LHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANC 153
+H +S G YGIG FG A+ F D+L +AG WQ+LPL + + SPY A
Sbjct: 1 MHISSLPGKYGIGTFGRSAYEFCDFLEKAGQKYWQILPL----GQTSYGDSPYQSFSAFA 56
Query: 154 GNTLLISLEELVKDGLLAKAELPQPI---DAERVNFAAVADLKDPLIAKAAERLIQSDGE 210
GN I L+ L + LL K + + + E +N+ + + K ++ KA D E
Sbjct: 57 GNPYFIDLDILNEKNLLDKDDYEEKNFGDNKEMINYGLIFNEKMKVLRKAYMNFNSKDDE 116
Query: 211 LKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKD 270
F +D WL+D + F A+ N SW W + +K R +E+ K+
Sbjct: 117 ---SFAKFIEDEK--KWLDDYSLFMALKYKFNFISWNSWNKDIKLRKNEEIEKYKDELKE 171
Query: 271 FIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGF- 329
++ + Q+ F QW+ +++YA K I I+GD+PIY+ S+DVW+N FLLN+
Sbjct: 172 DVNYWKFLQYEFFSQWKNLKDYANKKNIKIIGDIPIYIAQDSSDVWSNPDIFLLNKETLE 231
Query: 330 PLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFA 389
PL+VSG PPDAFSETGQLWG+P+YDW +EK F WW+ RI+ + LYD RIDHFRGF
Sbjct: 232 PLKVSGCPPDAFSETGQLWGNPIYDWGYLEKTNFEWWVDRIKSSLKLYDILRIDHFRGFE 291
Query: 390 GFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAP 449
+W+V K A +G+W GP LF+ I +G+I IIAEDLG +TE+ ++ +K G P
Sbjct: 292 AYWSVDYGEKTAQNGKWIKGPEMKLFNVIKEKIGDIEIIAEDLGYLTEETLEFKKRTGFP 351
Query: 450 GMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWD-TSKNEEKSNVMKYLSI 508
GM ++QF FG DS NP+LPHN+E+N V YTGTHDNDT+R W++ T EEK ++Y +
Sbjct: 352 GMKIIQFAFGGDSSNPYLPHNYEKNCVAYTGTHDNDTVRGWFEVTGSKEEKEKAVEYFKL 411
Query: 509 SEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIPSSTSFDR 568
+EE+ +W +I+ SSVA T++ +QD L LG AR+N P+T NWSWR + +
Sbjct: 412 TEEEGYNWGVIRGVWSSVANTSIGVMQDFLNLGNEARINKPSTLASNWSWRAKDNVFTNE 471
Query: 569 LETEATKLRDLLSTYGR 585
L A K+ L YGR
Sbjct: 472 L---ANKIYRLTRIYGR 485
>sp|O66937|MALQ_AQUAE 4-alpha-glucanotransferase OS=Aquifex aeolicus (strain VF5) GN=malQ
PE=1 SV=1
Length = 485
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/499 (42%), Positives = 294/499 (58%), Gaps = 18/499 (3%)
Query: 88 RRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYS 147
R AG+LLH TS PYGIGD G EA+RF+D+L + G S+WQVLPL P +A SPYS
Sbjct: 2 RLAGILLHVTSLPSPYGIGDLGKEAYRFLDFLKECGFSLWQVLPLNPTSLEAG--NSPYS 59
Query: 148 GQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQS 207
GN +LI EEL+++ L+ + +L + E + + V + K L+ KA + +
Sbjct: 60 SNSLFAGNYVLIDPEELLEEDLIKERDLKRFPLGEAL-YEVVYEYKKELLEKAFKNFRRF 118
Query: 208 DGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQS 267
+ LE+F K+ S WL D A + AI + WY W E LK R AL+ +
Sbjct: 119 E-----LLEDFLKEHSY--WLRDYALYMAIKEEEGK-EWYEWDEELKRREKEALKRVLNK 170
Query: 268 KKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRR 327
K + QF+F +QW+K+R YA+ +GISI+GD+P+Y Y SADVW N + F L+
Sbjct: 171 LKGRFYFHVFVQFVFFKQWEKLRRYARERGISIVGDLPMYPSYSSADVWTNPELFKLDGD 230
Query: 328 GFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRG 387
PL V+GVPPD FS+TGQLWG+P+Y+W+ EK+GF WWI R+ L+D R+DHFRG
Sbjct: 231 LKPLFVAGVPPDFFSKTGQLWGNPVYNWEEHEKEGFRWWIRRVHHNLKLFDFLRLDHFRG 290
Query: 388 FAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIG 447
F +W VP + A++GRW PGK+LF + IAEDLG IT++V LR++
Sbjct: 291 FEAYWEVPYGEETAVNGRWVKAPGKTLFKKLLSYFPKNPFIAEDLGFITDEVRYLRETFK 350
Query: 448 APGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLS 507
PG V++F F D ++ HLPHN E N V YT THD IR W++ E + + +YL
Sbjct: 351 IPGSRVIEFAF-YDKESEHLPHNVEENNVYYTSTHDLPPIRGWFENLGEESRKRLFEYLG 409
Query: 508 IS-EEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIPSSTSF 566
+E+ ++ +LI+ L S A+ A+I +QD+L LG ARMN P FGNW WRI +
Sbjct: 410 REIKEEKVNEELIRLVLISRAKFAIIQMQDLLNLGNEARMNYPGRPFGNWRWRIKEDYT- 468
Query: 567 DRLETEATKLRDLLSTYGR 585
+ ++ LL YGR
Sbjct: 469 ----QKKEFIKKLLGIYGR 483
>sp|P72785|MALQ_SYNY3 4-alpha-glucanotransferase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=malQ PE=3 SV=1
Length = 505
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 286/505 (56%), Gaps = 13/505 (2%)
Query: 86 DRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSP 145
D+R +G+LLHPTS +GIGD G AF+FID+L A SVWQ+LPL P G SP
Sbjct: 3 DKRCSGILLHPTSLPSRFGIGDLGDGAFQFIDFLADADQSVWQILPLGPTGFG----NSP 58
Query: 146 YSGQDANCGNTLLISLEELVKDGLLAKAELPQ--PIDAERVNFAAVADLKDPLIAKAAER 203
Y A N LISL+ L ++G L + L Q P RV++ K ++ +A +
Sbjct: 59 YLCYSALAINPWLISLDRLAEEGFLPPSLLDQAPPFTNPRVDYDQAIAYKSQVLKQAFAQ 118
Query: 204 LIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEE 263
+++ EL + E + S WL D A F AI ++ N W+ W + + R AL+
Sbjct: 119 F-RTNIELAIEQEFAEFCQAQSDWLADYALFMAIKEAHNGAGWHQWDKDIAWREPEALKI 177
Query: 264 IYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFL 323
K + QFL RQWQ+V+ YA + I+I GD+PIYV + SADVWAN ++F
Sbjct: 178 WGDRLKTEVLYHQFLQFLGFRQWQEVKAYANQRHIAIFGDLPIYVAHDSADVWANPENFC 237
Query: 324 LN-RRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRI 382
L+ G ++GVPPD FS TGQLWG+P+YDW+ ++ GF+WWI R + D RI
Sbjct: 238 LDPETGEAAMMAGVPPDYFSATGQLWGNPVYDWETLKATGFAWWIKRFKANLQYLDIVRI 297
Query: 383 DHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVG-NINIIAEDLGVITEDVVQ 441
DHFRGF +W VP K A +G W PGK F A+ +++G N+ I+AEDLGVIT +V
Sbjct: 298 DHFRGFESYWGVPQGEKTAENGEWYPAPGKEFFQALGKALGDNLPIVAEDLGVITPEVEA 357
Query: 442 LRKSIGAPGMAVLQFGFGSDSKNPHLPHNHER-NQVVYTGTHDNDTIRSWWDTSKNEEKS 500
LR PGM VL F F SD NP LP N+ N VVYTGTHDNDT W+ +++
Sbjct: 358 LRDEFNFPGMKVLHFAFDSDRGNPFLPFNYSNGNAVVYTGTHDNDTTVGWFQERSEDDQQ 417
Query: 501 NVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRI 560
V+ YL + I W LI+ A SSVA A+ PLQDIL LG RMN+P T GNW WR
Sbjct: 418 KVINYLGCVCNEGIHWSLIRLASSSVAALAIFPLQDILGLGSDCRMNLPGTAAGNWGWRY 477
Query: 561 PSSTSFDRLETEATKLRDLLSTYGR 585
D L + + +L YGR
Sbjct: 478 HPDQLNDWLSGHLSFITEL---YGR 499
>sp|O87172|MALQ_THETH 4-alpha-glucanotransferase OS=Thermus thermophilus GN=malQ PE=1
SV=1
Length = 500
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 275/483 (56%), Gaps = 20/483 (4%)
Query: 88 RRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYS 147
R G+LLHPTS GPYG+G G EA F+ +L +AG WQVLPL P G SPY
Sbjct: 5 RAFGLLLHPTSLPGPYGVGVLGREARDFLRFLKEAGGRYWQVLPLGPTGYG----DSPYQ 60
Query: 148 GQDANCGNTLLISLEELVKDGL--LAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLI 205
A GN LI L L + G L PQ RV++ + K P + +A
Sbjct: 61 SFSAFAGNPYLIDLRPLAERGYVRLEDPGFPQ----GRVDYGLLYAWKWPALKEAFRGFK 116
Query: 206 Q-SDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEI 264
+ + E + F + + WLED A F A+ + W WP L+ R AL E
Sbjct: 117 EKASPEEREAFAAFREREAW--WLEDYALFMALKGAHGGLPWNRWPLPLRKREEKALREA 174
Query: 265 YQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLL 324
+ + + Q+LF RQW ++ A+ GI I+GDMPI+V SA+VWA+ + F L
Sbjct: 175 KSALAEEVAFHAFTQWLFFRQWGALKAEAEALGIRIIGDMPIFVAEDSAEVWAHPEWFHL 234
Query: 325 NRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDH 384
+ G P V+GVPPD FSETGQ WG+PLY W +E++GFS+WI R+ +A +L+ RIDH
Sbjct: 235 DEEGRPTVVAGVPPDYFSETGQRWGNPLYRWDVLEREGFSFWIRRLEKALELFHLVRIDH 294
Query: 385 FRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRK 444
FRGF +W +P+ A++GRW PG+ LF I G + ++AEDLGVIT +V LR
Sbjct: 295 FRGFEAYWEIPASCPTAVEGRWVKAPGEKLFQKIQEVFGEVPVLAEDLGVITPEVEALRD 354
Query: 445 SIGAPGMAVLQFGFGSDSKNPHLPHNHERNQ--VVYTGTHDNDTIRSWWDTSKNEEKSNV 502
G PGM VLQF F +NP LPHN+ + VVYTGTHDNDT W+ T+ EK+ +
Sbjct: 355 RFGLPGMKVLQFAFDDGMENPFLPHNYPAHGRVVVYTGTHDNDTTLGWYRTATPHEKAFM 414
Query: 503 MKYL-----SISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWS 557
+YL + EE+++ W L+ + SVA+ AV P+QD+L LG ARMN P GNW+
Sbjct: 415 ARYLADWGITFREEEEVPWALMHLGMKSVARLAVYPVQDVLALGSEARMNYPGRPSGNWA 474
Query: 558 WRI 560
WR+
Sbjct: 475 WRL 477
>sp|P0A3Q1|MALQ_STRR6 4-alpha-glucanotransferase OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=malQ PE=3 SV=1
Length = 505
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 295/507 (58%), Gaps = 20/507 (3%)
Query: 87 RRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEG-SP 145
+R++GVL+H +S G YGIG FG A+ F+D+L + WQ+LPL A G SP
Sbjct: 3 KRQSGVLMHISSLPGAYGIGSFGQSAYDFVDFLVRTKQRYWQILPL-----GATSYGDSP 57
Query: 146 YSGQDANCGNTLLISLEELVKDGLLAKAELPQP---IDAERVNFAAVADLKDPLIAKAAE 202
Y A GNT I L+ LV+ GLL ++L DA V++A + + PL+ KA +
Sbjct: 58 YQSFSAFAGNTHFIDLDILVEQGLLEASDLEGVDFGSDASEVDYAKIYYARRPLLEKAVK 117
Query: 203 RLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPES-LKNRHLAAL 261
R + G++K E F +D SWLE A + AI + + +W WP++ + R +AL
Sbjct: 118 RFFEV-GDVKD-FEKFAQDNQ--SWLELFAEYMAIKEYFDNLAWTEWPDADARARKASAL 173
Query: 262 EEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKH 321
E + D + Q+ F +QW K++ YA I I+GDMPIYV S+D+WAN
Sbjct: 174 ESYREQLADKLVYHRVTQYFFFQQWLKLKAYANDNHIEIVGDMPIYVAEDSSDMWANPHL 233
Query: 322 FLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFR 381
F + G ++G PPD FS TGQLWG+P+YDW+AM+KDG+ WWI R+R + +YD R
Sbjct: 234 FKTDVNGKATCIAGCPPDEFSVTGQLWGNPIYDWEAMDKDGYKWWIERLRESFKIYDIVR 293
Query: 382 IDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQ 441
IDHFRGF +W +P+ + A G W GPG LF A+ +G +NIIAEDLG +T++V++
Sbjct: 294 IDHFRGFESYWEIPAGSDTAAPGEWVKGPGYKLFAAVKEELGELNIIAEDLGFMTDEVIE 353
Query: 442 LRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSN 501
LR+ G PGM +LQF F + ++ PH N V+YTGTHDN+T+ W+ ++
Sbjct: 354 LRERTGFPGMKILQFAFNPEDESIDSPHLAPANSVMYTGTHDNNTVLGWYRNEIDDATRE 413
Query: 502 VM-KYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRI 560
M +Y + E + + +++ SSV+ A+ +QD+L L +ARMN P+T GNWSWR+
Sbjct: 414 YMARYTNRKEYETVVHAMLRTVFSSVSFMAIATMQDLLELDEAARMNFPSTLGGNWSWRM 473
Query: 561 PSSTSFDRLETEATK-LRDLLSTYGRL 586
D+L + L DL + Y R+
Sbjct: 474 TE----DQLTPAVEEGLLDLTTIYRRI 496
>sp|P0A3Q0|MALQ_STRPN 4-alpha-glucanotransferase OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=malQ PE=3 SV=1
Length = 505
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 295/507 (58%), Gaps = 20/507 (3%)
Query: 87 RRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEG-SP 145
+R++GVL+H +S G YGIG FG A+ F+D+L + WQ+LPL A G SP
Sbjct: 3 KRQSGVLMHISSLPGAYGIGSFGQSAYDFVDFLVRTKQRYWQILPL-----GATSYGDSP 57
Query: 146 YSGQDANCGNTLLISLEELVKDGLLAKAELPQP---IDAERVNFAAVADLKDPLIAKAAE 202
Y A GNT I L+ LV+ GLL ++L DA V++A + + PL+ KA +
Sbjct: 58 YQSFSAFAGNTHFIDLDILVEQGLLEASDLEGVDFGSDASEVDYAKIYYARRPLLEKAVK 117
Query: 203 RLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPES-LKNRHLAAL 261
R + G++K E F +D SWLE A + AI + + +W WP++ + R +AL
Sbjct: 118 RFFEV-GDVKD-FEKFAQDNQ--SWLELFAEYMAIKEYFDNLAWTEWPDADARARKASAL 173
Query: 262 EEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKH 321
E + D + Q+ F +QW K++ YA I I+GDMPIYV S+D+WAN
Sbjct: 174 ESYREQLADKLVYHRVTQYFFFQQWLKLKAYANDNHIEIVGDMPIYVAEDSSDMWANPHL 233
Query: 322 FLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFR 381
F + G ++G PPD FS TGQLWG+P+YDW+AM+KDG+ WWI R+R + +YD R
Sbjct: 234 FKTDVNGKATCIAGCPPDEFSVTGQLWGNPIYDWEAMDKDGYKWWIERLRESFKIYDIVR 293
Query: 382 IDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQ 441
IDHFRGF +W +P+ + A G W GPG LF A+ +G +NIIAEDLG +T++V++
Sbjct: 294 IDHFRGFESYWEIPAGSDTAAPGEWVKGPGYKLFAAVKEELGELNIIAEDLGFMTDEVIE 353
Query: 442 LRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSN 501
LR+ G PGM +LQF F + ++ PH N V+YTGTHDN+T+ W+ ++
Sbjct: 354 LRERTGFPGMKILQFAFNPEDESIDSPHLAPANSVMYTGTHDNNTVLGWYRNEIDDATRE 413
Query: 502 VM-KYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRI 560
M +Y + E + + +++ SSV+ A+ +QD+L L +ARMN P+T GNWSWR+
Sbjct: 414 YMARYTNRKEYETVVHAMLRTVFSSVSFMAIATMQDLLELDEAARMNFPSTLGGNWSWRM 473
Query: 561 PSSTSFDRLETEATK-LRDLLSTYGRL 586
D+L + L DL + Y R+
Sbjct: 474 TE----DQLTPAVEEGLLDLTTIYRRI 496
>sp|Q9Z8L2|MALQ_CHLPN 4-alpha-glucanotransferase OS=Chlamydia pneumoniae GN=malQ PE=3
SV=1
Length = 526
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 212/479 (44%), Gaps = 39/479 (8%)
Query: 104 GIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEE 163
GIG+F + I W + G SV Q+LPL G E+ SPY+ + N L +SL
Sbjct: 41 GIGEF-LDLIPLISWCQKQGFSVIQLLPLNDTG----EDTSPYNSISSVALNPLFLSLSS 95
Query: 164 LVKDGLLAKA-----ELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENF 218
L + + ++ + V++ V + K + + ++ +S E S F
Sbjct: 96 LPNIDTIPEVAKKLQDMHELCSTPSVSYTQVKEKKWAFLREYYQKCCKSSLEGNSNFSEF 155
Query: 219 HKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQ 278
+ S WL F AI ++ WP+SL ++ ++ + D + F
Sbjct: 156 LE--SERYWLYPYGTFRAIKHHMHGEPINNWPKSLTDQ--ENFPDLTKKFHDEVLFFSYL 211
Query: 279 QFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPP 338
QFL +Q +V+ YA + + GD+PI + S DVW + +F +R G PP
Sbjct: 212 QFLCYQQLCEVKAYADQHHVLLKGDLPILISKDSCDVWYFRDYFSSSRS------VGAPP 265
Query: 339 DAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEA 398
D ++ GQ W P+Y++ + KD + WW R+R A++ Y +R+DH GF W S
Sbjct: 266 DLYNSEGQNWHLPIYNFSQLAKDDYIWWKERLRYAQNFYSVYRLDHIIGFFRLWIWDSSG 325
Query: 399 K---VAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPGMAVLQ 455
+ + + + + G + + ++ I EDLG+I +DV +G G + +
Sbjct: 326 RGRFIPDNPKDYIKQGTEILSTML-GASSMLPIGEDLGIIPQDVKTTLTHLGICGTRIPR 384
Query: 456 FGFGSDSKNPHLP-HNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLSISEEDDI 514
+ +S + +P ++ V THD+DT WW S E K K+L + + +
Sbjct: 385 WERNWESDSAFIPLKDYNPLSVTTLSTHDSDTFAQWWLNSPKEAK-QFAKFLHLPFQKTL 443
Query: 515 SWK----LIQAALSSVAQTAVIPLQDILRLG---VSA-----RMNIPAT-QFGNWSWRI 560
+ + +++ + S + + D L L VS R+N P T NWS+R+
Sbjct: 444 TTETQIDILKLSHESASIFHINLFNDYLALCPDLVSKNLQRERINTPGTISKKNWSYRV 502
>sp|Q9PKU9|MALQ_CHLMU 4-alpha-glucanotransferase OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=malQ PE=3 SV=1
Length = 527
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 220/517 (42%), Gaps = 74/517 (14%)
Query: 104 GIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEE 163
GIG+F + IDW G + Q+LP+ G + SPY+ + N L +S+
Sbjct: 45 GIGEF-LDLIPMIDWCTLCGFQILQILPINDTGSCS----SPYNSISSISLNPLHLSISA 99
Query: 164 L-VKDGLLAKAELPQPID----AERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENF 218
L K+ + + +L Q + +VN+ V +K K R+ +S +N
Sbjct: 100 LPYKEEVSSSRKLIQEMQRLSQLSQVNYEKVIPMKRAFF-KEYFRVCKS--------KNL 150
Query: 219 HKDPSISS-------WLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDF 271
P WL A F +I + LN W + + L I Q + F
Sbjct: 151 TNHPDFCDFCEREKYWLHPYALFCSIREHLNYLPINHWSTTYTD-----LSYISQHEHTF 205
Query: 272 ---IDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRG 328
I+ + Q+L Q ++VR +A KG I GD+PI + S DVW +K+F +
Sbjct: 206 AKDIEFYSYLQYLCFEQMKQVRKHADHKGCLIKGDIPILISKDSCDVWFYRKYFSSS--- 262
Query: 329 FPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGF 388
E G PPD ++ GQ W P+Y+ K + +D + WW R+R A + Y +R+DH G
Sbjct: 263 ---ESVGSPPDFYNAEGQNWNLPIYNMKTLRQDAYHWWKERLRYAENFYSLYRLDHVVGL 319
Query: 389 AGFWA---------VPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDV 439
FW P + K +D G + + ++ + I EDLG I DV
Sbjct: 320 FRFWVWDELGRGRFEPQDPKDYLDQ------GTDILSHLLKASSMLP-IGEDLGTIPVDV 372
Query: 440 VQLRKSIGAPGMAVLQFGFGSDSKNPHLPHN-HERNQVVYTGTHDNDTIRSWWDTSKNEE 498
Q +S+ G + ++ + ++P + + V THD+ T+ WW + E
Sbjct: 373 KQALESLAVCGTRIPRWERDWEGTGAYIPFDQYNPLSVTSLSTHDSSTLALWWQEAPQEA 432
Query: 499 KSNVMKYLSISEEDDISWKLIQAALSSVAQTAVI----PLQDILRLG--------VSARM 546
+ ++L + +S+ + L +T+ I + D L L + R+
Sbjct: 433 RL-FAQFLGMPYTPSLSFHNHKEILKLSHKTSSIFHINLINDYLALCPDLISTNPLQERI 491
Query: 547 NIPAT-QFGNWSWRIPSSTSFDRLETEATKLRDLLST 582
N+P T NW +R+ S ++L + KL LL++
Sbjct: 492 NLPGTISKNNWVYRV--KPSIEQLSAHS-KLNSLLAS 525
>sp|O84089|MALQ_CHLTR 4-alpha-glucanotransferase OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=malQ PE=3 SV=1
Length = 527
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 174/406 (42%), Gaps = 27/406 (6%)
Query: 104 GIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEE 163
GIG+F + IDW G + Q+LP+ G + SPY+ + N L +S+
Sbjct: 45 GIGEF-LDLIPMIDWCISCGFQILQILPINDTGSCS----SPYNSISSIALNPLHLSISA 99
Query: 164 LVKDGLLAKAE-----LPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENF 218
L + AE + Q +V++ V +K + Q F
Sbjct: 100 LPYKEEVPAAETRIREMQQLSQLPQVHYEKVRSMKRDFFQEYYRVCKQKKLTDHPDFYAF 159
Query: 219 HKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQ 278
+ WL A F +I + L+ WP + + L+ + E ++ + I
Sbjct: 160 CEQEKY--WLHPYALFRSIREHLDNLPINHWPTTYTD--LSQITEHERTFAEDIQFHSYL 215
Query: 279 QFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPP 338
Q+L +Q +VR +A K I GD+PI + S DVW + +F + E G PP
Sbjct: 216 QYLCFQQMTQVREHANCKSCLIKGDIPILISKDSCDVWFYRHYFSSS------ESVGAPP 269
Query: 339 DAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEA 398
D ++ GQ W P+ + K +++D + WW R+R A + Y +R+DH G FW V E+
Sbjct: 270 DLYNAEGQNWHLPICNMKTLQQDNYLWWKERLRYAENFYSLYRLDHVVGLFRFW-VWDES 328
Query: 399 KVA----MDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPGMAVL 454
D + + G+ + + S + I EDLG I DV ++ +S G +
Sbjct: 329 GCGRFEPHDPKNYLAQGQDILSHLLTSSSMLP-IGEDLGTIPSDVKRMLESFAVCGTRIP 387
Query: 455 QFGFGSDSKNPHLPHN-HERNQVVYTGTHDNDTIRSWWDTSKNEEK 499
++ + + P + ++ V THD+ T+ SWW S E K
Sbjct: 388 RWERNWEGNGAYTPFDQYDPLSVTSLSTHDSSTLASWWKESPQESK 433
>sp|O34022|MALQ_CHLCV 4-alpha-glucanotransferase OS=Chlamydophila caviae (strain GPIC)
GN=malQ PE=3 SV=1
Length = 530
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 203/490 (41%), Gaps = 45/490 (9%)
Query: 100 RGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLI 159
R GIG+F + I W + G + Q+LP+ G E+ SPY+ + N L +
Sbjct: 41 RNSCGIGEF-LDLIPMISWCRKHGFQIIQILPINDSG----EDSSPYNSISSVALNPLYL 95
Query: 160 SLEELVKDGLLAKAE-----LPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQ 214
SL L +A A + Q V++ V K + + +++
Sbjct: 96 SLASLPHAQSVAYANAKLRTMQQLSKLPYVHYPQVKAAKWEFLRDYYQYVVKIGALKDED 155
Query: 215 LENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKN-RHLAALEEIYQSKKDFID 273
E F + WL F +I L WP++ + ++ E+ +Q + F
Sbjct: 156 FEIFCEKEKY--WLRPYTVFRSIKYHLKGAPVNNWPKAYTDIKNFTEFEKQFQDECSF-- 211
Query: 274 LFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEV 333
F Q+L +Q +V+ +A + + GD+PI + S DVW ++ F + G
Sbjct: 212 -FSYLQYLCFQQMSQVKAFADDNHVFLKGDLPILISKDSCDVWYYRQFF--SSSG----S 264
Query: 334 SGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWA 393
+G PPD ++ GQ W P+Y+ + +D ++WW R+R A + Y +R+DH G W
Sbjct: 265 AGAPPDIYNTEGQNWHLPIYNMHNLVQDNYTWWKARLRYAENFYSLYRLDHIVGLFRLWV 324
Query: 394 --VPSEAKVAMDGRWKVGP-GKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPG 450
K D + P G + I R+ + I EDLG + DV + +G G
Sbjct: 325 WDTSGNGKFQPDDPKEYLPQGTDILTQILRA-SRMLPIGEDLGSVPTDVKETLVKLGICG 383
Query: 451 MAVLQFGFGSDSKNPHLP-HNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLS-- 507
+ ++ + +P + V THD+DT+ WW + E + ++L
Sbjct: 384 TRIPRWERNWEGDGNFIPLGEYSPLSVTSLSTHDSDTLALWWRHAPKEAQK-FAQFLGMF 442
Query: 508 ----ISEEDDISWKLIQAALSSVAQTAVIPLQDILRLG---VS-----ARMNIPAT-QFG 554
++EED + SS+ +I D L L VS R+N+P T
Sbjct: 443 FTPVLAEEDQKHILTLSHKTSSIFHINLI--NDYLALCPDLVSNNLKYERINMPGTVSKN 500
Query: 555 NWSWRIPSST 564
NW +RI S
Sbjct: 501 NWVYRIKPSV 510
>sp|Q8RXD9|DPE2_ARATH 4-alpha-glucanotransferase DPE2 OS=Arabidopsis thaliana GN=DPE2
PE=1 SV=1
Length = 955
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 142/331 (42%), Gaps = 23/331 (6%)
Query: 88 RRAGVLLHPTSFRGP--YGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPG-RKANEEGS 144
R AGV + S R G+G+F + +DW +G + Q+LP+ K +
Sbjct: 269 RGAGVAVPMFSVRSEDDVGVGEF-LDLKLLVDWAVDSGLHLVQLLPVNDTSVHKMWWDSY 327
Query: 145 PYSGQDANCGNTLLISL----EELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKA 200
PYS + L + + E L +D + +D V++ A + K + K
Sbjct: 328 PYSSLSVFALHPLYLRVQALSERLPEDIKEEIQKAKNQLDKNDVDYEATMETKLSIAKKI 387
Query: 201 AERLIQSDGELKSQ-LENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLA 259
+ I+ D L S + F + WL+ A F + D T W + +
Sbjct: 388 FD--IEKDQTLNSSTFQKFFSENE--GWLKPYAAFCFLRDFFETSDHSQWG-TFSDYTDD 442
Query: 260 ALEEIYQSKK---DFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVW 316
LE++ + I Q+ Q YA+ KG+ + GD+PI V +S D W
Sbjct: 443 KLEKLISKDNLHYNTICFHYYIQYHLHVQLSAAAEYARKKGVVLKGDLPIGVDRNSVDTW 502
Query: 317 ANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDL 376
+ F +N +G PPD F + GQ WG P Y+W+ M KD ++WW R+ +
Sbjct: 503 VYRNLFRMNTS------TGAPPDYFDKNGQNWGFPTYNWEEMSKDNYAWWRARLTQMGKY 556
Query: 377 YDEFRIDHFRGFAGFWAVPSEAKVAMDGRWK 407
+ +RIDH GF W +P+ A + G+++
Sbjct: 557 FTAYRIDHILGFFRIWELPAHAMTGLVGKFR 587
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 424 NINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHD 483
N+ EDLG+I V + + +G G+ + + SD K +P N++ V HD
Sbjct: 752 NMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPSESDVKF-GIPSNYDYMTVCAPSCHD 810
Query: 484 NDTIRSWWDTSKNEEKSNVMKYLSISE------EDDISWKLIQAALSSVAQTAVIPLQDI 537
T+R+WW+ + + + + + +I+ +++ + + + A+ PLQD+
Sbjct: 811 CSTLRAWWEEDEERRQQYFKEVIGVDGIPPSQCIPEITHFILRQHVEAPSMWAIFPLQDM 870
Query: 538 LRL--------GVSARMNIPATQFGNWSWRIPSSTSFDRLETEA---TKLRDLLSTYGR 585
+ L +N P W +R+ + D L + + +++L+S+ GR
Sbjct: 871 MALKEEYTTRPATEETINDPTNPKHYWRYRV--HVTLDSLLKDTDLKSTIKNLVSSSGR 927
>sp|Q69Q02|DPE2_ORYSJ 4-alpha-glucanotransferase DPE2 OS=Oryza sativa subsp. japonica
GN=DPE2 PE=2 SV=1
Length = 946
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 138/333 (41%), Gaps = 27/333 (8%)
Query: 88 RRAGVLLHPTSFRG--PYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANE-EGS 144
R AGV + S R G+G+F + +DW +G + Q+LP+ +
Sbjct: 263 RGAGVAVPIFSIRSNEDLGVGEF-LDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSY 321
Query: 145 PYSGQDANCGNTLLISLEEL-------VKDGLLAKAELPQPIDAERVNFAAVADLKDPL- 196
PYS + L + ++ L +KD + ++ + +D + V++ A L L
Sbjct: 322 PYSSLSVFALHPLYLRVQALSDAIPGDIKDEI---SQAKKQLDKKDVDYEA--SLASKLS 376
Query: 197 IAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPE--SLK 254
IA+ +L + S + F + WL+ A F + D T W
Sbjct: 377 IARKIFKLEKDKVLNSSSFKQFLSENE--EWLKPYAAFCFLRDFFETSDHSQWGRFSQFS 434
Query: 255 NRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSAD 314
L L D I Q+ Q + YA+ K + + GD+PI V +S D
Sbjct: 435 KEKLDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVD 494
Query: 315 VWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRAR 374
W F +N +G PPD F + GQ WG P Y+W+ M KD + WW R+ +
Sbjct: 495 TWVYPTLFRMN------TATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMA 548
Query: 375 DLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWK 407
+ +RIDH GF W +P A + G+++
Sbjct: 549 KYFTAYRIDHILGFFRIWELPDHAATGLVGKFR 581
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 34/182 (18%)
Query: 428 IAEDLGVITEDVVQLRKSIGAPGMAV--------LQFGFGSDSKNPHLPHNHERNQVVYT 479
EDLG+I V + + +G G+ + L+FG +P + V
Sbjct: 750 CGEDLGLIPACVHPVMQELGLIGLRIQRMPSEPNLEFG---------IPSQYSYMTVCAP 800
Query: 480 GTHDNDTIRSWWDTSKNEEKSNVMKYLSISEE------DDISWKLIQAALSSVAQTAVIP 533
HD T+R+WW+ + +E +++ +++ + + A+ P
Sbjct: 801 SCHDCSTLRAWWEEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMWAIFP 860
Query: 534 LQDILRL--------GVSARMNIPATQFGNWSWRIPSS--TSFDRLETEATKLRDLLSTY 583
LQD+L L +N P W +R+ + + D + +AT +++L+++
Sbjct: 861 LQDLLALKDKYTTRPAKEETINDPTNPKHYWRFRLHVTLDSLLDDKDIQAT-IKELVTSS 919
Query: 584 GR 585
GR
Sbjct: 920 GR 921
>sp|P15977|MALQ_ECOLI 4-alpha-glucanotransferase OS=Escherichia coli (strain K12) GN=malQ
PE=3 SV=2
Length = 694
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 161/424 (37%), Gaps = 31/424 (7%)
Query: 90 AGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQ 149
A V L+ +GIGDFG +D + + G S + P+ E SPYS
Sbjct: 146 ACVQLYTLRSEKNWGIGDFGDLKAMLVD-VAKRGGSFIGLNPIHALYPANPESASPYSPS 204
Query: 150 DANCGNTLLISLEELVKDGLLAKAE-----------LPQPIDAERVNFAAVADLKDPLIA 198
N + I + + L +A+ L Q DA+ V+++ V LK +
Sbjct: 205 SRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALR 264
Query: 199 KAAERLIQSDGELKSQLENFHKDPSISSWLE---DAAYFAAIDDSLNTFSWYLWPESLKN 255
A + Q D E + F + S + + DA + + + + W WPE +N
Sbjct: 265 MAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQN 324
Query: 256 RHLAALEEIYQSKKDFIDLFIAQQFL----FQRQWQKVRNYAQMKGISIMGDMPIYVGYH 311
+ + + +D +D ++ Q+L F W+ + Y I + D+ + V
Sbjct: 325 VDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEM--PIGLYRDLAVGVAEG 382
Query: 312 SADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIR 371
A+ W +++ + L G PPD GQ WG P D + + +I +R
Sbjct: 383 GAETWCDRELYCLKAS------VGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLR 436
Query: 372 RARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFD--AIFRSVGNINIIA 429
RIDH W +P + A G + P L A+ +I
Sbjct: 437 ANMQNCGALRIDHVMSMLRLWWIPY-GETADQGAYVHYPVDDLLSILALESKRHRCMVIG 495
Query: 430 EDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRS 489
EDLG + ++V +S G VL F K P + + THD T+R
Sbjct: 496 EDLGTVPVEIVGKLRSSGVYSYKVLYFE-NDHEKTFRAPKAYPEQSMAVAATHDLPTLRG 554
Query: 490 WWDT 493
+W+
Sbjct: 555 YWEC 558
>sp|P45176|MALQ_HAEIN 4-alpha-glucanotransferase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=malQ PE=3 SV=1
Length = 699
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 178/439 (40%), Gaps = 41/439 (9%)
Query: 82 PDPRDRRRAGVLLHPTSFRGP--YGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKA 139
P +++ GV + S R +GIGDFG A+ I+ + G + PL P
Sbjct: 141 PVLENKKVWGVNVQLYSLRSEQNWGIGDFGDLAY-LIEQSAKQGADYVGINPLHLPYPAV 199
Query: 140 NEEGSPYSGQDANCGNTLLISLEELVK-------DGLLAKAELPQPIDAER----VNFAA 188
SPYS N L + + +L + + ++ I A R V++++
Sbjct: 200 PNWASPYSSSSRRWLNFLYLDIPDLPEFKRCRSVQNWFKREDIQAKIAALRESDCVDYSS 259
Query: 189 VADLK----DPLI---AKAAERLIQSDGELKSQLENFHKDPSISSWL---EDAAYFAAID 238
+ LK +PL ++ I + ++ ++ +P + L D A
Sbjct: 260 ILALKLTALEPLFDFFQRSQSVEIVTRRKIFAEYLKNKGEPLLLQGLFNVLDLQEHADHQ 319
Query: 239 DSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKG- 297
NT W W + ++ A + + ++ + I F Q+L + Q ++N + G
Sbjct: 320 AEENTIGWLGWRKEWQHLSAAKRKALLKTHHEKIQFFAWLQWLTEEQLSALQNLCKQSGM 379
Query: 298 -ISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWK 356
+ I GD+ + SADVW++ + +N G PPD GQ W P Y+
Sbjct: 380 KLGIYGDLAVNSSRGSADVWSDPDLYCVNAS------IGAPPDPLGPVGQNWNLPPYNPT 433
Query: 357 AMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFD 416
++ GF+ +I + + RIDH G W +P + K A DG + P L
Sbjct: 434 VLKARGFAPFIDMLCANMQYFGVLRIDHVMGLFRLWWIP-KGKTAADGAYVHYPFDELMA 492
Query: 417 AI-FRSVGN-INIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPH--NHE 472
+ SV N II EDLG + ++V VL F +N P ++
Sbjct: 493 ILAIESVRNECLIIGEDLGTVPDEVRWKLNEFQIFSYFVLYFA----QRNGEFPRISDYP 548
Query: 473 RNQVVYTGTHDNDTIRSWW 491
RN GTHD +++S+W
Sbjct: 549 RNAYATIGTHDVPSLQSFW 567
>sp|P65336|MALQ_MYCTU 4-alpha-glucanotransferase OS=Mycobacterium tuberculosis GN=malQ
PE=3 SV=1
Length = 724
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 166/458 (36%), Gaps = 77/458 (16%)
Query: 56 SGNAAASAVASVGQDLPDDYEEWTPKPDPRDRRRA---GVLLHPTSFRGPYGIGDFG--- 109
SG++ ASA V D W PD RRA V L+ R +GIGD
Sbjct: 147 SGDSQASAAVVVTPD-------WLGLPDKLAGRRAWGLAVQLYSVRSRQSWGIGDLTDLA 199
Query: 110 ----------AEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLI 159
+ ++ LH A LP P GR E SPY N L +
Sbjct: 200 NLALWSASAHGAGYVLVNPLHAA------TLP-GPAGRSKPIEPSPYLPTSRRFVNPLYL 252
Query: 160 SLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENFH 219
+E + + L K Q + A D D A AA+R + L+ H
Sbjct: 253 RVEAIPELVDLPKRGRVQRLRTNVQQHADQLDTIDRDSAWAAKR---------AALKLVH 303
Query: 220 KDP-SISSWLEDAAYFAAIDDSLNTFS------------WYLWPESLKNRHLAALEEIYQ 266
+ P S L AA+ +L+ F+ W+ WP+SL++ + + +
Sbjct: 304 RVPRSAGRELAYAAFRTREGRALDDFATWCALAETYGDDWHRWPKSLRHPDASGVADFVD 363
Query: 267 SKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGIS--IMGDMPIYVGYHSADVWANKKHFLL 324
D +D Q+ Q ++ A G+S IM D+ + V + AD WA +
Sbjct: 364 KHADAVDFHRWLQWQLDEQLASAQSQALRAGMSLGIMADLAVGVHPNGADAWALQDVLAQ 423
Query: 325 NRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDH 384
+G PPD F++ GQ W P + + + + + I+ A RIDH
Sbjct: 424 G------VTAGAPPDEFNQLGQDWSQPPWRPDRLAEQEYRPFRALIQAALRHAGAVRIDH 477
Query: 385 FRGFAGFWAVPSEAK------VAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVI--- 435
G W +P A V D +G A+ ++ EDLG +
Sbjct: 478 IIGLFRLWWIPDGAPPTQGTYVRYDHDAMIG-----IVALEAHRAGAVVVGEDLGTVEPW 532
Query: 436 TEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHER 473
D + LR G G ++L F D P ER
Sbjct: 533 VRDYLLLR---GLLGTSILWFEQDRDCGPAGTPLPAER 567
>sp|P65337|MALQ_MYCBO 4-alpha-glucanotransferase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=malQ PE=3 SV=1
Length = 724
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 166/458 (36%), Gaps = 77/458 (16%)
Query: 56 SGNAAASAVASVGQDLPDDYEEWTPKPDPRDRRRA---GVLLHPTSFRGPYGIGDFG--- 109
SG++ ASA V D W PD RRA V L+ R +GIGD
Sbjct: 147 SGDSQASAAVVVTPD-------WLGLPDKLAGRRAWGLAVQLYSVRSRQSWGIGDLTDLA 199
Query: 110 ----------AEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLI 159
+ ++ LH A LP P GR E SPY N L +
Sbjct: 200 NLALWSASAHGAGYVLVNPLHAA------TLP-GPAGRSKPIEPSPYLPTSRRFVNPLYL 252
Query: 160 SLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENFH 219
+E + + L K Q + A D D A AA+R + L+ H
Sbjct: 253 RVEAIPELVDLPKRGRVQRLRTNVQQHADQLDTIDRDSAWAAKR---------AALKLVH 303
Query: 220 KDP-SISSWLEDAAYFAAIDDSLNTFS------------WYLWPESLKNRHLAALEEIYQ 266
+ P S L AA+ +L+ F+ W+ WP+SL++ + + +
Sbjct: 304 RVPRSAGRELAYAAFRTREGRALDDFATWCALAETYGDDWHRWPKSLRHPDASGVADFVD 363
Query: 267 SKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGIS--IMGDMPIYVGYHSADVWANKKHFLL 324
D +D Q+ Q ++ A G+S IM D+ + V + AD WA +
Sbjct: 364 KHADAVDFHRWLQWQLDEQLASAQSQALRAGMSLGIMADLAVGVHPNGADAWALQDVLAQ 423
Query: 325 NRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDH 384
+G PPD F++ GQ W P + + + + + I+ A RIDH
Sbjct: 424 G------VTAGAPPDEFNQLGQDWSQPPWRPDRLAEQEYRPFRALIQAALRHAGAVRIDH 477
Query: 385 FRGFAGFWAVPSEAK------VAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVI--- 435
G W +P A V D +G A+ ++ EDLG +
Sbjct: 478 IIGLFRLWWIPDGAPPTQGTYVRYDHDAMIG-----IVALEAHRAGAVVVGEDLGTVEPW 532
Query: 436 TEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHER 473
D + LR G G ++L F D P ER
Sbjct: 533 VRDYLLLR---GLLGTSILWFEQDRDCGPAGTPLPAER 567
>sp|Q07QX3|NUOCD_RHOP5 NADH-quinone oxidoreductase subunit C/D OS=Rhodopseudomonas
palustris (strain BisA53) GN=nuoC PE=3 SV=1
Length = 581
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 64 VASVGQDLPD-------DYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFI 116
+ V DLP+ ++ +W PK R AG++L FRG +G + +
Sbjct: 347 IGGVAADLPEGWDRLVREFLDWMPK---RLDDYAGMVLGNEIFRG-RTVGIAAYDTATAL 402
Query: 117 DW------LHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEEL 164
DW L GC W + P G N E +G + +C + +L+ +EE+
Sbjct: 403 DWGITGPGLRATGCD-WDLRKARPYGGYENFEFEVPTGNNGDCYDRVLVRVEEM 455
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,425,161
Number of Sequences: 539616
Number of extensions: 10186329
Number of successful extensions: 28439
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 27877
Number of HSP's gapped (non-prelim): 412
length of query: 586
length of database: 191,569,459
effective HSP length: 123
effective length of query: 463
effective length of database: 125,196,691
effective search space: 57966067933
effective search space used: 57966067933
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)