Citrus Sinensis ID: 007886

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580------
MAALGSLSFSSLASSSSSSPKPSSFLATATLRPRFFLCTPFAAKTSAASASCSSVSGNAAASAVASVGQDLPDDYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIPSSTSFDRLETEATKLRDLLSTYGRL
ccccccccccccccccccccccccccccccccccccccccccEEEEECcccccccccccccccccccccccccccccccccccccccccEEEECcccccccccccccccHHHHHHHHHHHHccccEEECcccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccCCccccHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHccEEHHHHHHHccHHccccccccccccccEEEccHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHcccccEEEEEEcccccccccccccccccccCEEccccccHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccc
*****************SSPKPSSFLATATLRPRFFLCTPFAAKTSAAS*************AVASVGQDLPDDYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIPSSTSFDRLETEATKLRDLLSTYGRL
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SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAALGSLSFSSLASSSSSSPKPSSFLATATLRPRFFLCTPFAAKTSAASASCSSVSGNAAASAVASVGQDLPDDYEEWTPKPDPRDRRRAGVLLHPTSFRGPYGIGDFGAEAFRFIDWLHQAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLAKAELPQPIDAERVNFAAVADLKDPLIAKAAERLIQSDGELKSQLENFHKDPSISSWLEDAAYFAAIDDSLNTFSWYLWPESLKNRHLAALEEIYQSKKDFIDLFIAQQFLFQRQWQKVRNYAQMKGISIMGDMPIYVGYHSADVWANKKHFLLNRRGFPLEVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIHRIRRARDLYDEFRIDHFRGFAGFWAVPSEAKVAMDGRWKVGPGKSLFDAIFRSVGNINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDSKNPHLPHNHERNQVVYTGTHDNDTIRSWWDTSKNEEKSNVMKYLSISEEDDISWKLIQAALSSVAQTAVIPLQDILRLGVSARMNIPATQFGNWSWRIPSSTSFDRLETEATKLRDLLSTYGRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic Chloroplastic alpha-glucanotransferase involved in maltotriose metabolism. Probably uses maltotriose as substrate to transfer a maltosyl unit from one molecule to another, resulting in glucose and maltopentaose. The latter can then be further metabolized to maltose and maltotriose by beta-amylase. Required for normal starch degradation in leaves.confidentQ9LV91
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic Chloroplastic alpha-glucanotransferase involved in maltotriose metabolism.confidentQ8LI30
4-alpha-glucanotransferase, chloroplastic/amyloplastic May act during starch breakdown to convert small oligosaccharides into larger molecules upon which starch phosphorylase can act, or may change the structure of starch molecules and grain architecture by modifying chain length, or may generate from starch and glucose oligosaccharides which can serve either as primers for new starch phosphoenzyme.probableQ06801

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.25Transferred entry: 2.4.1.25.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1X1N, chain A
Confidence level:very confident
Coverage over the Query: 65-586
View the alignment between query and template
View the model in PyMOL