Query 007887
Match_columns 586
No_of_seqs 255 out of 1752
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 16:40:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007887.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007887hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 2E-168 5E-173 1373.6 51.3 583 1-586 7-598 (598)
2 PLN02222 phosphoinositide phos 100.0 8E-165 2E-169 1344.3 51.5 573 3-586 5-581 (581)
3 PLN02952 phosphoinositide phos 100.0 2E-161 4E-166 1321.6 49.4 578 3-586 18-599 (599)
4 PLN02228 Phosphoinositide phos 100.0 3E-160 6E-165 1305.6 51.5 555 3-586 4-561 (567)
5 KOG0169 Phosphoinositide-speci 100.0 3E-161 6E-166 1312.0 40.8 556 1-586 184-744 (746)
6 PLN02223 phosphoinositide phos 100.0 4E-154 9E-159 1239.5 45.1 526 8-586 1-537 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 7E-142 2E-146 1153.8 35.0 546 18-585 216-822 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 6E-135 1E-139 1089.9 30.4 530 37-585 236-1188(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 6E-112 1E-116 840.7 20.4 257 108-425 1-258 (258)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 8E-111 2E-115 829.4 20.6 252 108-425 1-254 (254)
11 cd08630 PI-PLCc_delta3 Catalyt 100.0 1E-110 3E-115 833.7 20.8 256 108-425 1-258 (258)
12 cd08624 PI-PLCc_beta2 Catalyti 100.0 2E-110 3E-115 832.8 21.2 254 108-425 1-261 (261)
13 cd08631 PI-PLCc_delta4 Catalyt 100.0 2E-110 4E-115 831.0 20.4 256 108-425 1-258 (258)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 2E-110 5E-115 830.1 20.5 255 108-425 1-257 (257)
15 cd08632 PI-PLCc_eta1 Catalytic 100.0 2E-110 4E-115 824.9 19.4 251 108-425 1-253 (253)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 6E-110 1E-114 825.9 19.5 249 108-425 1-254 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 2E-109 4E-114 823.4 19.9 251 108-425 1-257 (257)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 3E-109 6E-114 822.7 20.0 251 108-425 1-258 (258)
19 cd08591 PI-PLCc_beta Catalytic 100.0 7E-109 2E-113 819.3 20.8 251 108-425 1-257 (257)
20 cd08593 PI-PLCc_delta Catalyti 100.0 6E-109 1E-113 823.3 20.0 256 108-425 1-257 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 1E-108 2E-113 822.9 20.7 250 109-425 2-258 (258)
22 cd08628 PI-PLCc_gamma2 Catalyt 100.0 4E-108 8E-113 814.3 18.2 253 108-425 1-254 (254)
23 cd08594 PI-PLCc_eta Catalytic 100.0 1E-107 2E-112 796.0 19.6 225 108-425 1-227 (227)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 5E-106 1E-110 803.8 20.1 259 108-425 1-260 (260)
25 cd08558 PI-PLCc_eukaryota Cata 100.0 8E-105 2E-109 779.1 19.9 225 108-425 1-226 (226)
26 cd08627 PI-PLCc_gamma1 Catalyt 100.0 2E-104 3E-109 773.7 19.8 226 108-424 1-228 (229)
27 cd08598 PI-PLC1c_yeast Catalyt 100.0 3E-104 7E-109 777.2 20.2 229 108-424 1-230 (231)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 2E-103 4E-108 769.5 19.3 227 108-425 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 3E-102 6E-107 763.1 19.7 226 108-425 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 1.3E-64 2.9E-69 518.0 16.9 251 108-425 1-274 (274)
31 smart00149 PLCYc Phospholipase 100.0 1.9E-46 4.1E-51 331.8 6.4 115 322-437 1-115 (115)
32 PF00387 PI-PLC-Y: Phosphatidy 100.0 5.1E-47 1.1E-51 337.9 1.2 118 320-438 1-118 (118)
33 smart00148 PLCXc Phospholipase 100.0 7.1E-41 1.5E-45 308.1 12.9 134 109-243 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 1.2E-37 2.7E-42 290.7 12.7 143 111-254 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 9.3E-22 2E-26 203.0 11.8 146 109-254 3-209 (324)
36 cd00275 C2_PLC_like C2 domain 99.8 6.7E-19 1.4E-23 159.6 15.3 125 457-586 2-128 (128)
37 cd08590 PI-PLCc_Rv2075c_like C 99.8 1.3E-18 2.8E-23 177.6 11.7 143 108-252 3-168 (267)
38 cd08395 C2C_Munc13 C2 domain t 99.7 3.4E-17 7.3E-22 147.8 12.1 103 458-567 1-111 (120)
39 cd04036 C2_cPLA2 C2 domain pre 99.7 6.6E-16 1.4E-20 138.8 13.2 114 459-586 2-118 (119)
40 cd08682 C2_Rab11-FIP_classI C2 99.6 1.2E-15 2.5E-20 138.7 12.5 115 459-584 1-126 (126)
41 cd08557 PI-PLCc_bacteria_like 99.6 3.6E-16 7.8E-21 159.8 9.4 144 110-254 4-158 (271)
42 cd04042 C2A_MCTP_PRT C2 domain 99.6 3E-15 6.5E-20 134.9 13.6 116 458-585 1-119 (121)
43 cd08381 C2B_PI3K_class_II C2 d 99.6 2E-15 4.3E-20 136.8 12.1 97 457-560 13-112 (122)
44 cd08677 C2A_Synaptotagmin-13 C 99.6 1E-15 2.2E-20 137.1 10.0 98 456-563 13-114 (118)
45 cd04016 C2_Tollip C2 domain pr 99.6 5.4E-15 1.2E-19 133.7 14.0 115 457-585 2-121 (121)
46 cd04029 C2A_SLP-4_5 C2 domain 99.6 4.4E-15 9.4E-20 135.1 11.6 107 456-567 14-125 (125)
47 cd08377 C2C_MCTP_PRT C2 domain 99.6 1.3E-14 2.7E-19 130.0 14.4 117 458-586 2-119 (119)
48 cd08406 C2B_Synaptotagmin-12 C 99.6 1.9E-15 4.1E-20 139.6 9.2 111 457-573 15-128 (136)
49 cd04019 C2C_MCTP_PRT_plant C2 99.6 8.1E-15 1.8E-19 137.6 13.6 116 459-585 2-131 (150)
50 cd08379 C2D_MCTP_PRT_plant C2 99.6 9.3E-15 2E-19 133.1 12.8 113 459-580 2-124 (126)
51 cd04022 C2A_MCTP_PRT_plant C2 99.6 8.3E-15 1.8E-19 133.3 12.5 117 458-585 1-125 (127)
52 cd04015 C2_plant_PLD C2 domain 99.6 1.5E-14 3.3E-19 136.9 14.4 125 456-586 6-158 (158)
53 cd08393 C2A_SLP-1_2 C2 domain 99.6 9.2E-15 2E-19 132.9 11.7 104 457-566 15-124 (125)
54 cd04010 C2B_RasA3 C2 domain se 99.6 1.3E-14 2.8E-19 135.9 12.4 108 458-573 1-127 (148)
55 cd04028 C2B_RIM1alpha C2 domai 99.6 1.8E-14 4E-19 134.3 13.4 107 457-569 29-139 (146)
56 cd08692 C2B_Tac2-N C2 domain s 99.6 7.5E-15 1.6E-19 134.6 10.3 104 455-564 12-118 (135)
57 cd08392 C2A_SLP-3 C2 domain fi 99.6 1.3E-14 2.8E-19 132.6 11.9 97 457-559 15-114 (128)
58 cd04033 C2_NEDD4_NEDD4L C2 dom 99.6 1.9E-14 4.2E-19 131.6 13.0 122 458-586 1-133 (133)
59 cd08378 C2B_MCTP_PRT_plant C2 99.6 2.4E-14 5.2E-19 129.5 13.1 110 459-585 2-119 (121)
60 cd04039 C2_PSD C2 domain prese 99.6 1.3E-14 2.7E-19 128.8 10.4 97 458-561 2-99 (108)
61 cd04041 C2A_fungal C2 domain f 99.6 1.3E-14 2.8E-19 129.0 9.3 102 458-567 2-107 (111)
62 cd08407 C2B_Synaptotagmin-13 C 99.6 1.1E-14 2.5E-19 134.6 8.7 114 456-573 14-130 (138)
63 cd04031 C2A_RIM1alpha C2 domai 99.5 5.5E-14 1.2E-18 127.0 12.5 105 456-566 15-124 (125)
64 cd08376 C2B_MCTP_PRT C2 domain 99.5 8.9E-14 1.9E-18 124.2 13.5 110 459-585 2-114 (116)
65 cd08400 C2_Ras_p21A1 C2 domain 99.5 1E-13 2.3E-18 126.1 14.2 115 457-585 4-122 (126)
66 cd08375 C2_Intersectin C2 doma 99.5 6.5E-14 1.4E-18 129.3 13.0 92 457-559 15-106 (136)
67 cd08681 C2_fungal_Inn1p-like C 99.5 4.7E-14 1E-18 126.3 11.4 113 458-585 2-118 (118)
68 cd08404 C2B_Synaptotagmin-4 C2 99.5 1.6E-14 3.4E-19 133.1 8.2 112 457-574 15-129 (136)
69 cd04050 C2B_Synaptotagmin-like 99.5 6.5E-14 1.4E-18 123.2 11.1 96 459-568 2-102 (105)
70 cd08680 C2_Kibra C2 domain fou 99.5 4.9E-14 1.1E-18 128.1 10.6 96 457-558 14-112 (124)
71 cd08678 C2_C21orf25-like C2 do 99.5 1E-13 2.2E-18 126.0 12.1 116 459-586 1-120 (126)
72 cd08385 C2A_Synaptotagmin-1-5- 99.5 8.3E-14 1.8E-18 125.9 11.3 97 457-561 16-114 (124)
73 cd04025 C2B_RasA1_RasA4 C2 dom 99.5 1.4E-13 2.9E-18 124.4 12.4 115 458-583 1-122 (123)
74 KOG1030 Predicted Ca2+-depende 99.5 3.2E-14 7E-19 132.8 8.4 92 457-560 6-97 (168)
75 cd08373 C2A_Ferlin C2 domain f 99.5 1.9E-13 4E-18 124.3 13.1 109 463-585 2-115 (127)
76 cd08402 C2B_Synaptotagmin-1 C2 99.5 3E-14 6.5E-19 131.1 7.9 112 457-574 15-129 (136)
77 cd04040 C2D_Tricalbin-like C2 99.5 1.7E-13 3.7E-18 122.0 12.3 111 459-581 1-114 (115)
78 cd08685 C2_RGS-like C2 domain 99.5 7.6E-14 1.6E-18 125.9 9.9 97 457-560 12-110 (119)
79 cd08688 C2_KIAA0528-like C2 do 99.5 6.9E-14 1.5E-18 124.1 9.5 100 459-568 1-109 (110)
80 cd04030 C2C_KIAA1228 C2 domain 99.5 1.5E-13 3.2E-18 124.6 11.7 98 457-560 16-117 (127)
81 cd08387 C2A_Synaptotagmin-8 C2 99.5 1.5E-13 3.2E-18 124.3 11.6 96 457-560 16-113 (124)
82 cd04032 C2_Perforin C2 domain 99.5 1.8E-13 3.9E-18 124.8 12.0 93 456-560 27-120 (127)
83 cd04018 C2C_Ferlin C2 domain t 99.5 1.1E-13 2.3E-18 130.0 10.7 95 459-558 2-105 (151)
84 cd08382 C2_Smurf-like C2 domai 99.5 2.1E-13 4.6E-18 123.5 12.3 113 459-583 2-122 (123)
85 cd08384 C2B_Rabphilin_Doc2 C2 99.5 6.1E-14 1.3E-18 128.4 8.4 113 456-574 12-127 (133)
86 cd08521 C2A_SLP C2 domain firs 99.5 2.3E-13 5E-18 122.6 11.8 99 456-560 13-114 (123)
87 cd08391 C2A_C2C_Synaptotagmin_ 99.5 4.6E-13 9.9E-18 120.0 13.6 117 458-585 2-121 (121)
88 cd04011 C2B_Ferlin C2 domain s 99.5 1.9E-13 4.1E-18 121.4 10.8 98 457-569 4-111 (111)
89 cd04024 C2A_Synaptotagmin-like 99.5 4.6E-13 1E-17 121.3 13.5 117 458-585 2-128 (128)
90 cd08410 C2B_Synaptotagmin-17 C 99.5 7.1E-14 1.5E-18 128.8 8.2 112 457-574 14-129 (135)
91 cd08403 C2B_Synaptotagmin-3-5- 99.5 7.6E-14 1.7E-18 128.1 8.1 113 456-574 13-128 (134)
92 PF09279 EF-hand_like: Phospho 99.5 5.1E-14 1.1E-18 118.8 6.2 77 24-104 1-77 (83)
93 cd08388 C2A_Synaptotagmin-4-11 99.5 1.9E-13 4.1E-18 124.9 10.3 95 457-559 16-114 (128)
94 cd04009 C2B_Munc13-like C2 dom 99.5 2.9E-13 6.3E-18 124.3 11.2 96 457-558 16-117 (133)
95 cd04043 C2_Munc13_fungal C2 do 99.5 8.6E-13 1.9E-17 119.5 13.8 102 458-567 2-109 (126)
96 cd08405 C2B_Synaptotagmin-7 C2 99.5 1.2E-13 2.7E-18 127.0 7.9 112 457-574 15-129 (136)
97 cd04027 C2B_Munc13 C2 domain s 99.5 1E-12 2.2E-17 119.7 13.5 114 458-583 2-127 (127)
98 cd04051 C2_SRC2_like C2 domain 99.5 3E-13 6.4E-18 122.5 9.8 108 458-575 1-121 (125)
99 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 9.9E-13 2.1E-17 118.9 13.0 115 459-585 2-121 (121)
100 cd04054 C2A_Rasal1_RasA4 C2 do 99.4 8.6E-13 1.9E-17 119.2 12.6 115 459-584 2-120 (121)
101 cd04017 C2D_Ferlin C2 domain f 99.4 1.1E-12 2.3E-17 120.8 13.3 115 458-586 2-132 (135)
102 cd04048 C2A_Copine C2 domain f 99.4 4.7E-13 1E-17 120.5 10.5 104 462-571 5-117 (120)
103 cd04046 C2_Calpain C2 domain p 99.4 3E-12 6.5E-17 116.5 15.8 114 457-585 3-121 (126)
104 cd08386 C2A_Synaptotagmin-7 C2 99.4 7.3E-13 1.6E-17 119.8 11.7 97 457-561 16-115 (125)
105 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 7.5E-13 1.6E-17 125.9 11.7 97 456-558 26-125 (162)
106 cd08390 C2A_Synaptotagmin-15-1 99.4 7.9E-13 1.7E-17 119.1 11.1 102 457-566 14-121 (123)
107 cd08389 C2A_Synaptotagmin-14_1 99.4 7.9E-13 1.7E-17 120.1 11.0 101 457-566 16-122 (124)
108 cd08409 C2B_Synaptotagmin-15 C 99.4 5.2E-13 1.1E-17 123.4 9.7 97 457-560 15-113 (137)
109 cd04014 C2_PKC_epsilon C2 doma 99.4 1.9E-12 4.2E-17 118.5 13.3 116 457-585 4-128 (132)
110 cd04026 C2_PKC_alpha_gamma C2 99.4 1E-12 2.3E-17 119.9 11.4 108 457-570 13-123 (131)
111 cd08690 C2_Freud-1 C2 domain f 99.4 3.8E-12 8.3E-17 119.8 15.2 121 459-585 4-136 (155)
112 cd04044 C2A_Tricalbin-like C2 99.4 2E-12 4.3E-17 116.4 12.7 119 457-586 2-123 (124)
113 cd00276 C2B_Synaptotagmin C2 d 99.4 3.7E-13 8.1E-18 122.8 7.7 112 457-574 14-128 (134)
114 cd08408 C2B_Synaptotagmin-14_1 99.4 9.9E-13 2.1E-17 121.8 9.9 111 457-573 15-130 (138)
115 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.4E-12 3E-17 117.8 10.5 97 457-560 15-114 (123)
116 cd04037 C2E_Ferlin C2 domain f 99.4 1.6E-12 3.5E-17 118.0 10.7 91 459-558 2-92 (124)
117 cd04038 C2_ArfGAP C2 domain pr 99.4 2.4E-12 5.2E-17 120.2 10.3 91 457-560 2-92 (145)
118 cd08686 C2_ABR C2 domain in th 99.4 2.7E-12 5.8E-17 115.0 10.0 93 459-564 1-103 (118)
119 cd08691 C2_NEDL1-like C2 domai 99.4 8.1E-12 1.8E-16 115.5 13.0 94 458-560 2-107 (137)
120 cd08675 C2B_RasGAP C2 domain s 99.4 5.6E-12 1.2E-16 116.6 11.4 104 459-570 1-122 (137)
121 cd04045 C2C_Tricalbin-like C2 99.3 8.5E-12 1.9E-16 112.7 10.7 92 458-560 2-93 (120)
122 cd04049 C2_putative_Elicitor-r 99.3 8.1E-12 1.8E-16 113.0 10.5 91 458-559 2-96 (124)
123 cd08394 C2A_Munc13 C2 domain f 99.3 9.6E-12 2.1E-16 112.8 10.3 94 457-567 2-100 (127)
124 cd08676 C2A_Munc13-like C2 dom 99.3 1.6E-11 3.4E-16 115.6 11.4 95 454-558 25-143 (153)
125 cd04013 C2_SynGAP_like C2 doma 99.3 2.8E-11 6.1E-16 112.8 12.6 114 456-585 10-138 (146)
126 PLN03008 Phospholipase D delta 99.3 1.1E-11 2.4E-16 140.5 11.6 99 482-586 75-177 (868)
127 KOG0696 Serine/threonine prote 99.3 2.9E-12 6.3E-17 133.7 5.7 96 457-558 180-276 (683)
128 cd08383 C2A_RasGAP C2 domain ( 99.3 5.2E-11 1.1E-15 106.1 13.0 113 459-585 2-117 (117)
129 cd04021 C2_E3_ubiquitin_ligase 99.3 3.6E-11 7.9E-16 109.3 11.6 113 458-583 3-124 (125)
130 PF00168 C2: C2 domain; Inter 99.3 1.3E-11 2.9E-16 102.3 8.0 85 459-551 1-85 (85)
131 cd08555 PI-PLCc_GDPD_SF Cataly 99.3 2.9E-11 6.3E-16 116.7 10.5 98 122-224 2-109 (179)
132 cd04052 C2B_Tricalbin-like C2 99.2 4.5E-11 9.8E-16 106.3 10.4 96 480-585 9-108 (111)
133 cd04047 C2B_Copine C2 domain s 99.2 5.9E-11 1.3E-15 104.9 9.4 93 461-560 4-101 (110)
134 smart00239 C2 Protein kinase C 99.1 3.7E-10 7.9E-15 95.7 10.2 99 459-565 2-100 (101)
135 KOG1028 Ca2+-dependent phospho 99.1 4.4E-10 9.4E-15 122.2 12.5 104 457-568 167-275 (421)
136 PLN03200 cellulose synthase-in 99.0 1.1E-09 2.4E-14 135.0 12.0 114 456-585 1979-2099(2102)
137 cd08374 C2F_Ferlin C2 domain s 99.0 2.8E-09 6.1E-14 97.8 10.1 97 459-561 2-125 (133)
138 KOG1011 Neurotransmitter relea 98.9 1.5E-09 3.2E-14 117.7 8.1 115 457-583 295-421 (1283)
139 cd08586 PI-PLCc_BcPLC_like Cat 98.9 3.3E-09 7.1E-14 109.5 8.6 137 112-253 7-148 (279)
140 cd00030 C2 C2 domain. The C2 d 98.9 1.2E-08 2.6E-13 85.6 9.9 90 459-558 1-90 (102)
141 PLN02270 phospholipase D alpha 98.9 1.2E-08 2.6E-13 116.2 12.5 125 456-586 7-148 (808)
142 cd08588 PI-PLCc_At5g67130_like 98.8 9.7E-09 2.1E-13 105.4 9.5 137 111-251 8-153 (270)
143 KOG1028 Ca2+-dependent phospho 98.8 1.1E-08 2.3E-13 111.5 9.7 161 408-574 230-412 (421)
144 COG5038 Ca2+-dependent lipid-b 98.7 2.9E-08 6.4E-13 114.9 10.3 104 457-570 1040-1146(1227)
145 KOG1328 Synaptic vesicle prote 98.3 1.8E-07 3.9E-12 103.2 2.5 95 457-557 947-1047(1103)
146 PLN02352 phospholipase D epsil 98.3 3.3E-06 7.2E-11 96.4 11.9 118 456-586 9-130 (758)
147 COG5038 Ca2+-dependent lipid-b 97.9 2.2E-05 4.8E-10 91.7 8.9 93 457-558 436-528 (1227)
148 cd08689 C2_fungal_Pkc1p C2 dom 97.9 1.6E-05 3.6E-10 69.5 5.5 88 459-559 1-88 (109)
149 KOG1031 Predicted Ca2+-depende 97.8 6.1E-05 1.3E-09 81.8 9.0 119 457-585 3-137 (1169)
150 KOG2059 Ras GTPase-activating 97.8 7.8E-05 1.7E-09 83.1 9.4 111 457-579 5-120 (800)
151 KOG1011 Neurotransmitter relea 97.7 0.00011 2.4E-09 80.7 9.4 103 457-566 1125-1235(1283)
152 KOG0905 Phosphoinositide 3-kin 97.7 3.3E-05 7.2E-10 89.7 4.7 96 457-558 1524-1622(1639)
153 cd08622 PI-PLCXDc_CG14945_like 97.7 0.00032 6.9E-09 72.6 11.1 135 112-251 6-158 (276)
154 KOG1013 Synaptic vesicle prote 97.6 9E-05 1.9E-09 76.3 5.8 104 458-573 234-339 (362)
155 cd08587 PI-PLCXDc_like Catalyt 97.6 0.00053 1.2E-08 71.3 11.4 136 112-251 6-170 (288)
156 KOG2059 Ras GTPase-activating 97.3 0.00058 1.3E-08 76.4 8.1 75 483-558 150-240 (800)
157 cd08683 C2_C2cd3 C2 domain fou 97.1 0.0011 2.5E-08 60.0 6.5 73 484-557 33-130 (143)
158 cd08616 PI-PLCXD1c Catalytic d 97.1 0.0044 9.6E-08 64.6 11.9 135 112-252 7-174 (290)
159 cd08398 C2_PI3K_class_I_alpha 97.1 0.008 1.7E-07 57.0 12.0 101 457-567 8-120 (158)
160 cd04012 C2A_PI3K_class_II C2 d 97.0 0.0057 1.2E-07 58.8 10.6 112 457-574 8-141 (171)
161 cd08693 C2_PI3K_class_I_beta_d 96.9 0.011 2.4E-07 57.0 11.9 103 457-567 8-134 (173)
162 KOG1328 Synaptic vesicle prote 96.9 0.00033 7.2E-09 78.2 1.4 66 502-567 179-282 (1103)
163 cd08380 C2_PI3K_like C2 domain 96.9 0.011 2.4E-07 55.7 11.5 103 458-567 9-121 (156)
164 KOG1326 Membrane-associated pr 96.8 0.00086 1.9E-08 77.5 4.0 94 454-556 610-703 (1105)
165 KOG1013 Synaptic vesicle prote 96.8 0.00028 6.1E-09 72.7 -0.1 98 457-560 93-193 (362)
166 cd08556 GDPD Glycerophosphodie 96.7 0.0071 1.5E-07 57.9 8.7 64 132-209 9-72 (189)
167 cd08582 GDPD_like_2 Glyceropho 96.6 0.0089 1.9E-07 60.0 9.2 40 134-174 11-50 (233)
168 cd08562 GDPD_EcUgpQ_like Glyce 96.6 0.0055 1.2E-07 61.0 7.6 40 134-174 11-50 (229)
169 cd08397 C2_PI3K_class_III C2 d 96.6 0.008 1.7E-07 57.1 8.1 84 484-567 30-121 (159)
170 PLN02964 phosphatidylserine de 96.5 0.0055 1.2E-07 69.9 7.7 85 456-557 53-137 (644)
171 cd08579 GDPD_memb_like Glycero 96.4 0.0084 1.8E-07 59.6 7.1 41 133-174 10-50 (220)
172 PF03009 GDPD: Glycerophosphor 96.3 0.005 1.1E-07 61.4 5.2 40 134-174 8-47 (256)
173 cd08684 C2A_Tac2-N C2 domain f 96.3 0.0063 1.4E-07 51.6 4.8 90 461-559 3-94 (103)
174 cd08563 GDPD_TtGDE_like Glycer 96.1 0.016 3.6E-07 57.9 7.5 40 134-174 13-52 (230)
175 cd08567 GDPD_SpGDE_like Glycer 96.1 0.021 4.5E-07 58.2 8.3 41 134-175 13-53 (263)
176 cd08619 PI-PLCXDc_plant Cataly 96.0 0.033 7.1E-07 57.5 9.0 137 109-254 23-166 (285)
177 cd08399 C2_PI3K_class_I_gamma 95.9 0.053 1.1E-06 52.5 9.5 102 458-566 11-135 (178)
178 cd08620 PI-PLCXDc_like_1 Catal 95.7 0.078 1.7E-06 55.0 10.8 139 112-252 6-161 (281)
179 cd08577 PI-PLCc_GDPD_SF_unchar 95.6 0.033 7.2E-07 56.0 7.5 97 122-229 4-109 (228)
180 cd08565 GDPD_pAtGDE_like Glyce 95.6 0.058 1.3E-06 54.4 9.3 40 134-174 11-50 (235)
181 cd05029 S-100A6 S-100A6: S-100 95.6 0.05 1.1E-06 46.4 7.4 63 24-94 11-78 (88)
182 PF00792 PI3K_C2: Phosphoinosi 95.6 0.034 7.4E-07 51.6 6.9 82 486-567 4-99 (142)
183 cd08566 GDPD_AtGDE_like Glycer 95.5 0.049 1.1E-06 55.1 8.2 39 135-174 14-52 (240)
184 cd08573 GDPD_GDE1 Glycerophosp 95.2 0.076 1.6E-06 54.4 8.5 40 134-174 11-50 (258)
185 cd08568 GDPD_TmGDE_like Glycer 95.2 0.082 1.8E-06 52.8 8.5 79 133-221 11-114 (226)
186 cd08564 GDPD_GsGDE_like Glycer 94.8 0.13 2.8E-06 52.7 9.1 40 133-173 17-56 (265)
187 cd08575 GDPD_GDE4_like Glycero 94.4 0.056 1.2E-06 55.5 5.0 42 134-176 13-54 (264)
188 cd08584 PI-PLCc_GDPD_SF_unchar 94.3 0.18 3.8E-06 49.4 8.1 48 137-188 7-54 (192)
189 cd08561 GDPD_cytoplasmic_ScUgp 94.1 0.065 1.4E-06 54.3 4.8 41 134-175 11-51 (249)
190 KOG2060 Rab3 effector RIM1 and 93.7 0.038 8.2E-07 58.3 2.2 106 456-567 268-378 (405)
191 cd08574 GDPD_GDE_2_3_6 Glycero 93.7 0.071 1.5E-06 54.3 4.2 41 134-175 14-54 (252)
192 cd08695 C2_Dock-B C2 domains f 93.2 0.92 2E-05 44.3 10.8 40 500-539 53-94 (189)
193 cd08601 GDPD_SaGlpQ_like Glyce 93.2 0.099 2.2E-06 53.2 4.4 41 134-175 13-53 (256)
194 cd08580 GDPD_Rv2277c_like Glyc 93.2 0.12 2.6E-06 53.1 5.0 42 133-175 12-53 (263)
195 cd08581 GDPD_like_1 Glyceropho 93.1 0.1 2.2E-06 52.4 4.2 41 134-175 11-51 (229)
196 cd08600 GDPD_EcGlpQ_like Glyce 93.0 0.11 2.4E-06 54.9 4.5 43 132-175 11-53 (318)
197 PRK11143 glpQ glycerophosphodi 93.0 0.12 2.6E-06 55.5 4.8 42 133-175 38-79 (355)
198 KOG1327 Copine [Signal transdu 93.0 0.19 4.2E-06 55.8 6.5 83 502-584 43-130 (529)
199 cd08612 GDPD_GDE4 Glycerophosp 93.0 0.12 2.5E-06 54.2 4.6 41 134-175 39-79 (300)
200 cd08607 GDPD_GDE5 Glycerophosp 92.9 0.13 2.8E-06 53.4 4.7 49 127-176 12-60 (290)
201 cd05023 S-100A11 S-100A11: S-1 92.6 0.43 9.3E-06 40.8 6.8 64 24-94 10-79 (89)
202 cd05026 S-100Z S-100Z: S-100Z 92.5 0.55 1.2E-05 40.3 7.5 65 23-94 10-80 (93)
203 cd05030 calgranulins Calgranul 92.4 0.37 8E-06 41.0 6.2 64 24-95 9-79 (88)
204 cd08571 GDPD_SHV3_plant Glycer 92.3 0.14 2.9E-06 53.8 4.0 41 134-175 13-53 (302)
205 cd08605 GDPD_GDE5_like_1_plant 92.3 0.14 3.1E-06 52.9 4.2 38 136-174 25-62 (282)
206 KOG3837 Uncharacterized conser 92.2 0.21 4.5E-06 53.5 5.1 120 458-585 368-502 (523)
207 cd05024 S-100A10 S-100A10: A s 92.2 0.66 1.4E-05 39.9 7.3 64 24-94 9-75 (91)
208 cd08609 GDPD_GDE3 Glycerophosp 92.1 0.16 3.5E-06 53.6 4.3 49 123-175 31-79 (315)
209 cd08559 GDPD_periplasmic_GlpQ_ 92.0 0.15 3.3E-06 53.2 4.0 42 133-175 12-53 (296)
210 cd08606 GDPD_YPL110cp_fungi Gl 91.8 0.16 3.5E-06 52.6 3.9 39 136-175 24-62 (286)
211 cd08694 C2_Dock-A C2 domains f 91.7 2.5 5.3E-05 41.5 11.6 68 500-567 53-131 (196)
212 cd05022 S-100A13 S-100A13: S-1 91.6 0.7 1.5E-05 39.6 6.9 65 23-95 8-75 (89)
213 cd08570 GDPD_YPL206cp_fungi Gl 91.6 0.25 5.4E-06 49.6 4.9 42 133-175 10-51 (234)
214 PRK09454 ugpQ cytoplasmic glyc 91.3 0.19 4.1E-06 51.0 3.7 42 133-175 19-60 (249)
215 cd08602 GDPD_ScGlpQ1_like Glyc 91.3 0.21 4.6E-06 52.6 4.1 42 133-175 12-53 (309)
216 PTZ00268 glycosylphosphatidyli 91.0 2.5 5.4E-05 45.5 11.8 107 142-255 90-207 (380)
217 PF13833 EF-hand_8: EF-hand do 90.7 0.6 1.3E-05 35.3 5.1 50 37-94 3-52 (54)
218 cd08583 PI-PLCc_GDPD_SF_unchar 90.3 0.38 8.3E-06 48.4 4.8 39 135-174 14-52 (237)
219 cd08604 GDPD_SHV3_repeat_2 Gly 90.0 0.35 7.7E-06 50.6 4.4 42 133-175 12-53 (300)
220 smart00142 PI3K_C2 Phosphoinos 89.7 1.6 3.5E-05 38.0 7.6 56 484-539 32-91 (100)
221 cd05025 S-100A1 S-100A1: S-100 89.6 1.3 2.7E-05 37.7 6.8 65 23-94 9-79 (92)
222 cd08572 GDPD_GDE5_like Glycero 89.5 0.41 8.9E-06 50.0 4.4 42 133-175 19-60 (293)
223 cd08610 GDPD_GDE6 Glycerophosp 88.9 0.47 1E-05 50.1 4.4 43 133-176 34-76 (316)
224 KOG1326 Membrane-associated pr 88.4 0.29 6.3E-06 57.4 2.5 99 459-568 208-317 (1105)
225 KOG1327 Copine [Signal transdu 86.8 0.91 2E-05 50.6 5.1 82 478-559 151-236 (529)
226 cd05027 S-100B S-100B: S-100B 86.6 3.3 7.2E-05 35.2 7.4 65 23-94 8-78 (88)
227 KOG2258 Glycerophosphoryl dies 86.1 0.97 2.1E-05 48.3 4.8 41 134-175 81-121 (341)
228 COG0584 UgpQ Glycerophosphoryl 86.0 0.81 1.8E-05 46.3 4.0 39 134-173 18-56 (257)
229 PF01023 S_100: S-100/ICaBP ty 86.0 0.99 2.2E-05 33.4 3.4 28 24-51 7-37 (44)
230 cd08585 GDPD_like_3 Glyceropho 86.0 0.72 1.6E-05 46.6 3.6 39 135-175 20-58 (237)
231 cd08613 GDPD_GDE4_like_1 Glyce 86.0 0.77 1.7E-05 48.3 3.9 39 136-175 60-98 (309)
232 PF13499 EF-hand_7: EF-hand do 86.0 0.81 1.7E-05 36.0 3.2 60 25-93 2-66 (66)
233 cd08560 GDPD_EcGlpQ_like_1 Gly 85.9 0.84 1.8E-05 49.1 4.2 41 133-174 28-69 (356)
234 cd08578 GDPD_NUC-2_fungi Putat 85.7 0.99 2.1E-05 47.4 4.5 52 118-176 3-54 (300)
235 PF15627 CEP76-C2: CEP76 C2 do 85.7 13 0.00028 35.3 11.4 125 454-585 6-149 (156)
236 smart00027 EH Eps15 homology d 85.6 3.6 7.9E-05 35.2 7.3 62 22-94 9-71 (96)
237 PF14429 DOCK-C2: C2 domain in 85.4 2.5 5.4E-05 40.9 6.9 67 501-567 60-135 (184)
238 cd08608 GDPD_GDE2 Glycerophosp 85.1 0.98 2.1E-05 48.4 4.2 42 133-175 13-54 (351)
239 cd00051 EFh EF-hand, calcium b 84.1 5 0.00011 29.6 6.8 60 25-93 2-62 (63)
240 PF10358 NT-C2: N-terminal C2 83.7 24 0.00052 32.1 12.4 114 457-585 7-134 (143)
241 cd05031 S-100A10_like S-100A10 82.2 5.7 0.00012 33.9 7.1 66 23-95 8-79 (94)
242 PTZ00183 centrin; Provisional 82.2 5.6 0.00012 36.4 7.6 66 21-95 88-154 (158)
243 cd08679 C2_DOCK180_related C2 81.7 3.3 7.2E-05 39.9 6.0 64 504-567 56-131 (178)
244 cd00213 S-100 S-100: S-100 dom 81.5 6.7 0.00014 32.8 7.2 66 22-94 7-78 (88)
245 PTZ00184 calmodulin; Provision 80.7 6.1 0.00013 35.6 7.2 66 21-95 82-148 (149)
246 PF09069 EF-hand_3: EF-hand; 80.6 3.2 7E-05 35.6 4.8 63 25-96 5-76 (90)
247 PF05386 TEP1_N: TEP1 N-termin 79.4 0.42 9E-06 31.9 -0.7 14 194-207 8-21 (30)
248 cd00052 EH Eps15 homology doma 78.5 9.8 0.00021 29.4 6.8 58 26-94 2-60 (67)
249 cd08603 GDPD_SHV3_repeat_1 Gly 76.6 2.8 6.1E-05 43.9 4.0 41 134-175 13-55 (299)
250 PF05517 p25-alpha: p25-alpha 72.1 9 0.0002 36.1 5.9 63 25-94 1-68 (154)
251 PF12416 DUF3668: Cep120 prote 69.5 45 0.00097 35.7 11.0 97 459-569 2-114 (340)
252 cd08621 PI-PLCXDc_like_2 Catal 69.3 12 0.00026 39.3 6.6 92 112-204 6-113 (300)
253 KOG4306 Glycosylphosphatidylin 64.7 28 0.00061 36.5 8.1 94 143-244 73-173 (306)
254 PTZ00183 centrin; Provisional 64.3 21 0.00046 32.5 6.7 65 21-94 15-80 (158)
255 KOG0904 Phosphatidylinositol 3 63.9 36 0.00077 40.4 9.3 99 457-564 343-467 (1076)
256 KOG1329 Phospholipase D1 [Lipi 61.1 9.7 0.00021 45.0 4.4 97 484-585 138-239 (887)
257 KOG0906 Phosphatidylinositol 3 58.8 9.5 0.00021 43.5 3.6 84 484-567 47-138 (843)
258 PTZ00184 calmodulin; Provision 58.8 39 0.00086 30.2 7.3 65 22-95 10-75 (149)
259 PF00036 EF-hand_1: EF hand; 55.9 16 0.00035 24.4 3.0 27 24-50 1-28 (29)
260 PF11422 IBP39: Initiator bind 54.9 55 0.0012 31.6 7.5 99 22-127 18-138 (181)
261 PF13405 EF-hand_6: EF-hand do 53.9 16 0.00035 24.3 2.9 27 24-50 1-28 (31)
262 cd08696 C2_Dock-C C2 domains f 53.6 53 0.0011 31.9 7.4 54 501-554 55-116 (179)
263 PRK07259 dihydroorotate dehydr 53.2 34 0.00075 35.6 6.7 79 130-221 95-180 (301)
264 PF08726 EFhand_Ca_insen: Ca2+ 52.7 8.8 0.00019 31.3 1.6 34 19-52 2-35 (69)
265 PF14788 EF-hand_10: EF hand; 52.5 30 0.00064 26.6 4.3 46 39-93 2-47 (51)
266 cd08697 C2_Dock-D C2 domains f 51.4 38 0.00083 33.0 6.1 66 501-566 57-137 (185)
267 KOG0027 Calmodulin and related 48.9 63 0.0014 29.8 7.1 65 22-95 7-72 (151)
268 PF11618 DUF3250: Protein of u 48.3 48 0.001 29.4 5.7 80 501-584 12-103 (107)
269 KOG0027 Calmodulin and related 47.6 61 0.0013 29.9 6.8 65 22-95 84-149 (151)
270 smart00054 EFh EF-hand, calciu 42.7 37 0.0008 20.3 3.2 27 24-50 1-28 (29)
271 COG5126 FRQ1 Ca2+-binding prot 40.7 93 0.002 29.7 6.8 67 20-95 89-156 (160)
272 COG5126 FRQ1 Ca2+-binding prot 40.1 1E+02 0.0022 29.5 6.9 61 24-94 21-82 (160)
273 cd02810 DHOD_DHPD_FMN Dihydroo 36.4 1.3E+02 0.0028 31.0 7.7 90 129-229 101-195 (289)
274 cd00252 SPARC_EC SPARC_EC; ext 33.5 1.8E+02 0.0038 26.1 7.1 61 21-94 46-107 (116)
275 PF12738 PTCB-BRCT: twin BRCT 33.0 31 0.00067 26.8 1.9 29 122-154 32-60 (63)
276 PF15625 CC2D2AN-C2: CC2D2A N- 32.4 1.3E+02 0.0029 28.6 6.6 67 485-558 38-107 (168)
277 PTZ00466 actin-like protein; P 31.6 52 0.0011 35.7 4.0 45 181-225 86-135 (380)
278 PRK09071 hypothetical protein; 31.4 34 0.00074 36.3 2.5 50 139-188 60-132 (323)
279 KOG0034 Ca2+/calmodulin-depend 31.4 1.3E+02 0.0029 29.3 6.4 83 9-95 88-175 (187)
280 PTZ00452 actin; Provisional 30.3 55 0.0012 35.4 3.9 45 181-225 79-129 (375)
281 PRK05395 3-dehydroquinate dehy 29.2 48 0.001 31.1 2.7 66 133-209 22-103 (146)
282 PTZ00281 actin; Provisional 28.9 56 0.0012 35.2 3.7 47 180-226 79-131 (376)
283 PF14186 Aida_C2: Cytoskeletal 28.8 1.8E+02 0.0039 27.4 6.5 120 457-585 13-147 (147)
284 PF11478 Tachystatin_B: Antimi 27.3 22 0.00047 25.0 0.1 16 142-160 1-16 (42)
285 KOG1452 Predicted Rho GTPase-a 26.9 2.7E+02 0.0059 29.5 7.9 77 456-542 50-126 (442)
286 KOG0751 Mitochondrial aspartat 26.8 1.6E+02 0.0035 33.0 6.5 71 15-92 25-99 (694)
287 PF00022 Actin: Actin; InterP 26.7 66 0.0014 34.5 3.8 45 181-225 73-123 (393)
288 PLN02591 tryptophan synthase 26.2 46 0.00099 34.1 2.3 93 135-230 11-113 (250)
289 PF00977 His_biosynth: Histidi 25.7 1.2E+02 0.0026 30.3 5.2 39 150-192 123-161 (229)
290 cd08687 C2_PKN-like C2 domain 24.7 2.6E+02 0.0055 24.4 6.1 46 511-561 31-76 (98)
291 smart00268 ACTIN Actin. ACTIN 24.7 76 0.0016 33.9 3.8 45 181-225 74-124 (373)
292 PTZ00004 actin-2; Provisional 23.9 91 0.002 33.6 4.2 46 181-226 80-131 (378)
293 PF05673 DUF815: Protein of un 23.4 1.7E+02 0.0036 30.0 5.6 85 122-229 51-137 (249)
294 cd00466 DHQase_II Dehydroquina 23.3 63 0.0014 30.1 2.4 67 132-209 19-101 (140)
295 cd04740 DHOD_1B_like Dihydroor 23.2 2.1E+02 0.0046 29.4 6.7 78 131-221 94-177 (296)
296 PF13202 EF-hand_5: EF hand; P 23.0 1E+02 0.0022 19.6 2.6 24 25-48 1-25 (25)
297 cd08576 GDPD_like_SMaseD_PLD G 22.5 1.6E+02 0.0035 30.4 5.4 59 127-190 1-67 (265)
298 PLN02964 phosphatidylserine de 22.4 2.4E+02 0.0053 32.9 7.4 64 24-96 180-244 (644)
299 PF10223 DUF2181: Uncharacteri 21.8 2.3E+02 0.005 28.9 6.3 53 136-188 11-68 (244)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=2.5e-168 Score=1373.62 Aligned_cols=583 Identities=67% Similarity=1.126 Sum_probs=505.9
Q ss_pred CCccceeeeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCC-CCChHHHHHHHHHHHhhccccccc
Q 007887 1 MGSYRMCVCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDD-GGSISDAEKVVDQVLKTRHHLAKF 79 (586)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~~~~~~ 79 (586)
||+||+|+||.|+|+...+.+|+||++||.+|++++..||+++|.+||+++|++. ..+.++|++||++|++...+....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 7899999999999999999999999999999998778999999999999999754 457899999999998544333344
Q ss_pred cCCccCHHHHHHHHcCCCCCCCCCCCCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeec
Q 007887 80 TRHTLTLDDFHHYLFSSDLNPPINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWP 159 (586)
Q Consensus 80 ~~~~l~~~~F~~~L~S~~~n~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wd 159 (586)
.++.|+++||++||+|.+.|++.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~~-~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wd 165 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPIA-DQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWP 165 (598)
T ss_pred cccccCHHHHHHHHcCcccCCccc-ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEeccC
Confidence 556899999999999977776665 6799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcCCCCCC
Q 007887 160 NSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCECLQEFP 239 (586)
Q Consensus 160 g~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lP 239 (586)
|++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+....||
T Consensus 166 g~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~lp 244 (598)
T PLN02230 166 RGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEFP 244 (598)
T ss_pred CCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCCC
Confidence 876 6899999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred ChhhhccceeeeccCCccccccccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCC-----CC--CCccc-cccccc
Q 007887 240 SPEELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETK-----SD--SDISD-ENEAYD 311 (586)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~-~~~~~~ 311 (586)
||++||||||||+|++++.++....... ........++++.|+.+..++.....+.+. ++ .+.++ ......
T Consensus 245 sP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (598)
T PLN02230 245 SPEELKEKILISTKPPKEYLEANDAKEK-DNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESD 323 (598)
T ss_pred ChHHHcCCEEEEecCCcccccccccccc-cccccccccchhhhccccccccccccccccccccccccccchhcccccccc
Confidence 9999999999999998776654322111 111112223344455443333221111000 00 00000 000111
Q ss_pred CCCchhhhhhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCC
Q 007887 312 NERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNY 391 (586)
Q Consensus 312 ~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~ 391 (586)
++...++++|++||+|+.+++++++..+++..+.+++|+||||.++.+++++++.+|++||++||+||||+|+|||||||
T Consensus 324 ~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSSNy 403 (598)
T PLN02230 324 TSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSSNY 403 (598)
T ss_pred ccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCCCC
Confidence 12335689999999999999999999888877778899999999999999999999999999999999999999999999
Q ss_pred CCcccccccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCCCCcceEEEEEEEecccCCC
Q 007887 392 KPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEILPVKKTLKIKVYMGDGWHL 471 (586)
Q Consensus 392 ~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visgq~L~~ 471 (586)
||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|+|....+.+.+|+|+|++|++|++
T Consensus 404 nP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~~l 483 (598)
T PLN02230 404 KPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGWLL 483 (598)
T ss_pred CchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCccC
Confidence 99999999999999999999999999999999999999999999999976655679998877677899999999999987
Q ss_pred CCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEE
Q 007887 472 DFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTC 551 (586)
Q Consensus 472 ~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ 551 (586)
+++++..+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|+|.+..||||+|||.|+|+|..++++|+||+|
T Consensus 484 ~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiGQ~~ 563 (598)
T PLN02230 484 DFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQTC 563 (598)
T ss_pred CCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEEEEE
Confidence 76666677788999999999999999999999998888899999999999999999999999999999878899999999
Q ss_pred EECCCCCCcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 552 LPVSELKPGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 552 ipL~~L~~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
+||++|++|||||||+|..|+++.+++|||||+|.
T Consensus 564 lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 564 LPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred cchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 99999999999999999999999999999999985
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=8.4e-165 Score=1344.30 Aligned_cols=573 Identities=61% Similarity=1.093 Sum_probs=495.5
Q ss_pred ccceeeeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCC
Q 007887 3 SYRMCVCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRH 82 (586)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 82 (586)
+|++|+||.|+|+.....+|+||..||.+|++ .+.||.++|.+||+++|++..++.++|.+||++|+.. ..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~------~~~~ 77 (581)
T PLN02222 5 TYKVCFCFRRRFRYTASEAPREIKTIFEKYSE-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL------LHRN 77 (581)
T ss_pred ceeEEEEeccccccccCCCcHHHHHHHHHhcC-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh------hhcc
Confidence 79999999999999999999999999999987 4799999999999999999888999999999998621 1346
Q ss_pred ccCHHHHHHHHcCCCCCCCCCCCCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC
Q 007887 83 TLTLDDFHHYLFSSDLNPPINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNST 162 (586)
Q Consensus 83 ~l~~~~F~~~L~S~~~n~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (586)
.|+++||++||+| +.|.++.+..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++
T Consensus 78 ~~~~~gF~~yL~s-~~n~~~~~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~ 156 (581)
T PLN02222 78 GLHLDAFFKYLFG-DNNPPLALHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSD 156 (581)
T ss_pred CcCHHHHHHHhcC-CCCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 7999999999998 578887646789999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-cCCCCCCCh
Q 007887 163 KDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-ECLQEFPSP 241 (586)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP 241 (586)
+++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||
T Consensus 157 ~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lpsP 236 (581)
T PLN02222 157 KDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFPSP 236 (581)
T ss_pred CCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCCCh
Confidence 7778999999999999999999999999999999999999999999999999999999999999999874 446799999
Q ss_pred hhhccceeeeccCCccccccccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCC---CCcccccccccCCCchhh
Q 007887 242 EELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSD---SDISDENEAYDNERPLEA 318 (586)
Q Consensus 242 ~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 318 (586)
++||||||||+|++++.++....... ..... ..++..|+.+.++........++++ ++++++.+.+.+.+....
T Consensus 237 ~~Lk~kilik~K~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (581)
T PLN02222 237 NSLKKRIIISTKPPKEYKEGKDDEVV-QKGKD--LGDEEVWGREVPSFIQRNKSVDKNDSNGDDDDDDDDGEDKSKKNAP 313 (581)
T ss_pred HHHCCCEEEEecCCcccccccccccc-ccccc--cccccccccccccccccccccccccccccccccccccccccccccC
Confidence 99999999999998765543210000 00000 1122334444443322111111100 000011112222334457
Q ss_pred hhhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCccccc
Q 007887 319 ADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWM 398 (586)
Q Consensus 319 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~ 398 (586)
+++++|++++.+++++++...++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||+
T Consensus 314 ~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~~~W~ 393 (581)
T PLN02222 314 PQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGWS 393 (581)
T ss_pred HHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCchhHhc
Confidence 88999999999998888877776667678899999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCCCCcceEEEEEEEecccCCCCCccccc
Q 007887 399 HGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEILPVKKTLKIKVYMGDGWHLDFKQTHF 478 (586)
Q Consensus 399 ~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visgq~L~~~~~~~~~ 478 (586)
+|||||||||||+|++||||+|||+.||+|||||||++||+.......|+|....|++.+|+|+|++|++|+++.++...
T Consensus 394 ~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~~~~~ 473 (581)
T PLN02222 394 HGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFRHTHF 473 (581)
T ss_pred CCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCCcccc
Confidence 99999999999999999999999999999999999999998765445799988878788999999999998766555556
Q ss_pred ccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 479 DLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 479 d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
+.++++||||+|+|.|.|.|+.++||+++.||+||+|||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||++|+
T Consensus 474 ~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~~lPv~~Lr 553 (581)
T PLN02222 474 DQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELS 553 (581)
T ss_pred CCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEEEcchhhhh
Confidence 67788999999999999999999999999999999999999999999999999999999998778999999999999999
Q ss_pred CcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 559 PGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 559 ~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
+|||||||+|..|+++.+|+|||||+|.
T Consensus 554 ~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 554 QGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred CccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 9999999999999999999999999984
No 3
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=2e-161 Score=1321.62 Aligned_cols=578 Identities=66% Similarity=1.114 Sum_probs=494.5
Q ss_pred ccceeeeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCC
Q 007887 3 SYRMCVCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRH 82 (586)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 82 (586)
+|+.|.||+|.++...+++|+||..||.+|++++..||+++|.+||+++|+|...+.++|.+||++|.....+...+.+.
T Consensus 18 ~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 97 (599)
T PLN02952 18 NYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTRYTRH 97 (599)
T ss_pred CHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccccccc
Confidence 68889999999999999999999999999998889999999999999999998889999999999886443333344556
Q ss_pred ccCHHHHHHHHcCCCCCCCCCCCCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC
Q 007887 83 TLTLDDFHHYLFSSDLNPPINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNST 162 (586)
Q Consensus 83 ~l~~~~F~~~L~S~~~n~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (586)
.|+++||++||+|.+.|.+.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++
T Consensus 98 ~l~~~~F~~~l~s~~~~~p~~-~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~ 176 (599)
T PLN02952 98 GLNLDDFFHFLLYDDLNGPIT-PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGST 176 (599)
T ss_pred CcCHHHHHHHHcCcccccccc-ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecCCC
Confidence 899999999999877777776 5799999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcCCCCCCChh
Q 007887 163 KDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCECLQEFPSPE 242 (586)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~ 242 (586)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+|+.|+.+....||||+
T Consensus 177 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~lpsP~ 256 (599)
T PLN02952 177 KDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQFPSPE 256 (599)
T ss_pred CCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCChH
Confidence 88899999999999999999999999999999999999999999999999999999999999999998766678999999
Q ss_pred hhccceeeeccCCcccccccccc---CCCCCCcCCCC-CCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhh
Q 007887 243 ELKYKIIISTKPPKEYLKAESKD---GTRSNSVKARD-SDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEA 318 (586)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (586)
+||||||||+|++++.++..... .....+..+.. ++++ .+...+.......+.+.. .+....+.+......
T Consensus 257 ~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 331 (599)
T PLN02952 257 SLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLFEQEADSR--SDSDQDDNKSGELQK 331 (599)
T ss_pred HhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---cccccccccccccccccc--ccccchhhhcccccc
Confidence 99999999999987665543210 00000000000 0000 000000000000000000 000000112223456
Q ss_pred hhhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCccccc
Q 007887 319 ADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWM 398 (586)
Q Consensus 319 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~ 398 (586)
+++++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||+
T Consensus 332 ~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSsNy~P~~~W~ 411 (599)
T PLN02952 332 PAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYKPLIGWM 411 (599)
T ss_pred hhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCCCCCchhHhc
Confidence 88999999999988877776665555567889999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCCCCcceEEEEEEEecccCCCCCccccc
Q 007887 399 HGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEILPVKKTLKIKVYMGDGWHLDFKQTHF 478 (586)
Q Consensus 399 ~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visgq~L~~~~~~~~~ 478 (586)
+|||||||||||+|++||||+|||+.||+|||||||++||..++.++.|||....|++++|+|+||+|++|+++...+..
T Consensus 412 ~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l~lp~~~~~~ 491 (599)
T PLN02952 412 HGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWRLDFSHTHF 491 (599)
T ss_pred CccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECcccCCCCccccC
Confidence 99999999999999999999999999999999999999998755456799988888888999999999999876544556
Q ss_pred ccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 479 DLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 479 d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
+.++++||||+|+|.|.|.|+.++||+++.||+||+|||+|+|.+..|++|+|+|.|+|+|..+.++|+||+++||++|+
T Consensus 492 ~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiGq~~lPv~~Lr 571 (599)
T PLN02952 492 DSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVSELR 571 (599)
T ss_pred CccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEEEEEcchhHhc
Confidence 77888999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred CcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 559 PGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 559 ~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
+|||||||+|..|++++.++|||||+|.
T Consensus 572 ~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 572 PGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred CCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 9999999999999999999999999984
No 4
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=2.8e-160 Score=1305.56 Aligned_cols=555 Identities=51% Similarity=0.919 Sum_probs=480.2
Q ss_pred ccceeeeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccc-cC
Q 007887 3 SYRMCVCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKF-TR 81 (586)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~-~~ 81 (586)
+|++|.||.|+|..-...+|+||..||.+|+++ +.||.++|.+||+++|++...+.+.|.+||++|++.. .+ .+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~----~~~~~ 78 (567)
T PLN02228 4 SFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHN----VFHHH 78 (567)
T ss_pred cceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccch----hhccc
Confidence 699999999999999999999999999999976 6899999999999999998888899999999998431 11 23
Q ss_pred CccCHHHHHHHHcCCCCCCCCCC-CCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecC
Q 007887 82 HTLTLDDFHHYLFSSDLNPPINY-DQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPN 160 (586)
Q Consensus 82 ~~l~~~~F~~~L~S~~~n~~~~~-~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg 160 (586)
+.|+++||++||+|. +|+++.+ ..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||
T Consensus 79 ~~~~~~gF~~yl~s~-~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg 157 (567)
T PLN02228 79 GLVHLNAFYRYLFSD-TNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPN 157 (567)
T ss_pred CccCHHHHHHHhcCc-ccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 569999999999984 6888754 67999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcCCCCCCC
Q 007887 161 STKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCECLQEFPS 240 (586)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPS 240 (586)
+++++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|+.++.+....|||
T Consensus 158 ~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lps 237 (567)
T PLN02228 158 PSGNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPS 237 (567)
T ss_pred CCCCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCC
Confidence 88778999999999999999999999999999999999999999999999999999999999999999987666789999
Q ss_pred hhhhccceeeeccCCccccccccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhh
Q 007887 241 PEELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAAD 320 (586)
Q Consensus 241 P~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (586)
|++||||||||+|++++..+...... + .....++..|.. .. +.. +......+.....+++
T Consensus 238 P~~Lk~kilik~Kk~~~~~~~~~~~~----~-~~~~~~~~~~~~-~~---------~~~-----~~~~~~~~~~~~~~~~ 297 (567)
T PLN02228 238 PEELKNKILISTKPPKEYLESKTVQT----T-RTPTVKETSWKR-VA---------DAE-----NKILEEYKDEESEAVG 297 (567)
T ss_pred hHHHCCCEEEEecCCccccccccccc----c-cccccccccccc-cc---------cch-----hhccccccccchhhhh
Confidence 99999999999999765433221100 0 000011111110 00 000 0000000111235688
Q ss_pred hhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCccccccc
Q 007887 321 YKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHG 400 (586)
Q Consensus 321 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G 400 (586)
|++|++++..++++++.......+...+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|
T Consensus 298 ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W~~G 377 (567)
T PLN02228 298 YRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGWTHG 377 (567)
T ss_pred hhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHhcCc
Confidence 99999998887766666554444556679999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCCCCcceEEEEEEEecccCCCCCccccccc
Q 007887 401 TQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEILPVKKTLKIKVYMGDGWHLDFKQTHFDL 480 (586)
Q Consensus 401 ~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visgq~L~~~~~~~~~d~ 480 (586)
||||||||||+|++||||+|||++||+|||||||++||+.. ..|+|....|++.+|+|+||+||+|+.+....+.+.
T Consensus 378 ~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~~~~ 454 (567)
T PLN02228 378 AQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFDQ 454 (567)
T ss_pred cEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEEEECCccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999853 369998777777789999999999865544444456
Q ss_pred CCCCCceEEEEEecCCCCcceecccccCCCCCCcc-CcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCC
Q 007887 481 YSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVW-EQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 481 ~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvW-NE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~ 559 (586)
++++||||+|+|.|.|.|..++||+++.||+||+| ||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||++|++
T Consensus 455 ~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq~~lPv~~Lr~ 534 (567)
T PLN02228 455 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKS 534 (567)
T ss_pred CCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEEEEcchhHhhC
Confidence 67899999999999999999999999999999999 99999999999999999999999977789999999999999999
Q ss_pred cceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 560 GIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 560 GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
|||||||+|..|+++.+|+|||||+|.
T Consensus 535 GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 535 GVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred CeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 999999999999999999999999984
No 5
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-161 Score=1311.98 Aligned_cols=556 Identities=47% Similarity=0.755 Sum_probs=484.3
Q ss_pred CCccceeeeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhcccccccc
Q 007887 1 MGSYRMCVCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFT 80 (586)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 80 (586)
+++||++.|++++|+... +.||||+++|.+|+.+.+.|+.++|.+||+++|++..++.+.|++||++|++... ...
T Consensus 184 ~~~~k~~~~~~~~~~~~~-~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~---~~~ 259 (746)
T KOG0169|consen 184 SQTGKLEEEEFVKFRKEL-TKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE---FRR 259 (746)
T ss_pred hccceehHHHHHHHHHhh-ccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh---ccc
Confidence 478999999999998775 4556999999999998999999999999999999999999999999999985422 112
Q ss_pred CCccCHHHHHHHHcCCCCCCCCCC--CCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEee
Q 007887 81 RHTLTLDDFHHYLFSSDLNPPINY--DQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIW 158 (586)
Q Consensus 81 ~~~l~~~~F~~~L~S~~~n~~~~~--~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~W 158 (586)
.+.|+++||++||+|++ +.+++| ..|+|||++|||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 260 ~~~l~ldgF~~yL~S~~-~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 260 HGLLSLDGFTRYLFSPD-CNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred cceecHHHHHHHhcCcc-CCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 35699999999999964 667777 889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCC
Q 007887 159 PNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQE 237 (586)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~ 237 (586)
||++ ++|+|||||||||+|.|++||+|||+|||++|+|||||||||||+++||.+||++|++||||+||.++.+ ....
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998865 6899
Q ss_pred CCChhhhccceeeeccCCccccccccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchh
Q 007887 238 FPSPEELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLE 317 (586)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (586)
||||++||||||||+||+++.+...... .......+++. +.+.. .+.+..+.. .+.+.+..+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~~~-----~~~~~~~d~~~-~~e~s-----------~e~~~~~~~-~~~~~~~~~ 479 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADSKE-----PSSFEVTDEDE-DKESS-----------TENDKSETD-GQKKSRKIL 479 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccccc-----ccccccccccc-ccccc-----------ccccccccc-cccchhhhh
Confidence 9999999999999999998765542100 00000000000 00000 000000000 012233368
Q ss_pred hhhhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccc
Q 007887 318 AADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGW 397 (586)
Q Consensus 318 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W 397 (586)
+++|++||+|+.+++++++...++.+ .+++++||||+++.++++..+.+|++||+++|+||||+|+|+|||||||+.||
T Consensus 480 ~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNynPq~~W 558 (746)
T KOG0169|consen 480 APELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYNPQEFW 558 (746)
T ss_pred hHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCChHHHH
Confidence 99999999999999999998888765 57889999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCC-CCcceEEEEEEEecccCCCCCccc
Q 007887 398 MHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEI-LPVKKTLKIKVYMGDGWHLDFKQT 476 (586)
Q Consensus 398 ~~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~~L~V~Visgq~L~~~~~~~ 476 (586)
++|||||||||||+|++||||+|||+.||||||||||.+||+++ ..|+|... .|++.+|+|+|++||+++.+...+
T Consensus 559 ~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~---~~F~P~~~~~~~~~tL~IkI~sGq~~~~~~~~~ 635 (746)
T KOG0169|consen 559 NHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSG---STFDPKSNLPPVKKTLKIKIISGQGWLPDFGKT 635 (746)
T ss_pred hcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCC---CccCCCCCCCCCCceeEEEEEecCcccCCCCCC
Confidence 99999999999999999999999999999999999999999943 47999766 445558999999999987765444
Q ss_pred ccccCCCCCceEEEEEecCCCCcceecccccCCC-CCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECC
Q 007887 477 HFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDN-WTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVS 555 (586)
Q Consensus 477 ~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn-~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~ 555 (586)
.. .+..||||.|+|.|.|.|+.+++|+++.+| +||.|+|+|+|++..||||+|||.|+|+|..++|||+||+|+|++
T Consensus 636 ~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~ddF~GQ~tlP~~ 713 (746)
T KOG0169|consen 636 KF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDDFIGQTTLPVS 713 (746)
T ss_pred cc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCcccccceeeccHH
Confidence 33 355799999999999999999999977765 999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 556 ELKPGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 556 ~L~~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
+|++|||||||+|..|+.+..|+|||||+|.
T Consensus 714 ~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 714 ELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred HhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 9999999999999999999999999999984
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=4.2e-154 Score=1239.50 Aligned_cols=526 Identities=44% Similarity=0.798 Sum_probs=454.1
Q ss_pred eeeecCCCCCCCCChhhHHHHHHHhhCCCCccCHHHHHHHH---HHHhCCCCCChHHHHHHHHHHHhhcccccccc-CCc
Q 007887 8 VCFTRKFRVTEAGPPEDVKEAFNKYAEGGTHMTAEQLRRFL---LEVQGDDGGSISDAEKVVDQVLKTRHHLAKFT-RHT 83 (586)
Q Consensus 8 ~~~~~~~~~~~~~~r~el~~if~~~~~~~~~~~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~~ 83 (586)
|.|.|+|+...+.+++||..+|.+|+++...|+.++|.+|| .++|+|..++.++|+.|++++.+...+++.+. .+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 57899999999999999999999999888999999999999 99999999999999999999886554444443 367
Q ss_pred cCHHHHHHHHcCCCCCCCCCCCCC-CcccCccccceeeeccccccccCCCCCCC-CChHHHHHHHhcCCcEEEEEeecCC
Q 007887 84 LTLDDFHHYLFSSDLNPPINYDQV-HQDMTAPLSHYFIYTGHNSYLTGNQLSSD-CSDVPIIKALKRGVRVVELDIWPNS 161 (586)
Q Consensus 84 l~~~~F~~~L~S~~~n~~~~~~~v-~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~-SS~e~Y~~aL~~GCRcvElD~Wdg~ 161 (586)
|+++||++||+|++.|.++. ..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||+
T Consensus 81 l~~~~f~~~L~s~~~n~~~~-~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~ 159 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG-DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDG 159 (537)
T ss_pred cCHHHHHHHhcCcccCCccc-cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCC
Confidence 99999999999988787776 567 99999999999999999999999999999 9999999999999999999999875
Q ss_pred CCCCceEeeccccccceeHHHHHHHHhhcccccC-CCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-cCCCCCC
Q 007887 162 TKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSAS-PYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-ECLQEFP 239 (586)
Q Consensus 162 ~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lP 239 (586)
. ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+|++++. +....||
T Consensus 160 ~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~lP 238 (537)
T PLN02223 160 K-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFP 238 (537)
T ss_pred C-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccCC
Confidence 4 67999999999999999999999999999998 9999999999999999999999999999999999764 5578999
Q ss_pred ChhhhccceeeeccCCccccccccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhh
Q 007887 240 SPEELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAA 319 (586)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (586)
||++||||||||+|++++.++.... + +.. .. +++ .+..+ ....+
T Consensus 239 SP~~Lk~kIlik~K~~~~~~~~~~~--------------~---~~~--~~------~~~-----~~~~~------~~~~~ 282 (537)
T PLN02223 239 SPAELQNKILISRRPPKELLYAKAD--------------D---GGV--GV------RNE-----LEIQE------GPADK 282 (537)
T ss_pred ChHHhCCCEEEEcCCCccccccccc--------------c---ccc--cc------ccc-----ccccc------ccccc
Confidence 9999999999999998765433210 0 000 00 000 00000 11246
Q ss_pred hhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHH--cchhhHHhhccccceEecCCCC-CCCCCCCCccc
Q 007887 320 DYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAES--HGTDLVRFTQKNILRIYPKGTR-FTSSNYKPLVG 396 (586)
Q Consensus 320 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~--~~~~~~~~~~~~l~RvYP~g~R-idSSN~~P~~~ 396 (586)
+|.+++.++..++++.+ .+++|.++.++.+. ++.++++||++||+||||+|+| +|||||||+.+
T Consensus 283 ~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSNYnP~~~ 349 (537)
T PLN02223 283 NYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAPYKPQRA 349 (537)
T ss_pred ceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCCCCChhh
Confidence 78889988877665432 34445545444432 4678999999999999999999 59999999999
Q ss_pred ccccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCCcCCCCCCCCcceEEEEEEEecccCCCCCccc
Q 007887 397 WMHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEILPVKKTLKIKVYMGDGWHLDFKQT 476 (586)
Q Consensus 397 W~~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visgq~L~~~~~~~ 476 (586)
|++|||||||||||+|++||||+|||++||+|||||||++||+.++++ .|+|....+.+.+|+|+||+|++|+.+.+++
T Consensus 350 W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~-~FdP~~~~~~~~~L~V~Visgq~~~~~~~k~ 428 (537)
T PLN02223 350 WMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWIVDFKKR 428 (537)
T ss_pred cccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCccc-ccCCCCCcccceEEEEEEEEcccccCCcccc
Confidence 999999999999999999999999999999999999999999976543 7999765556788999999999997543333
Q ss_pred ccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCC
Q 007887 477 HFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSE 556 (586)
Q Consensus 477 ~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~ 556 (586)
. +..+++||||+|+|.|.|.|+.++||++..|++||+|||+|+|.+.+||+|+|||.|+|+|..+.++|+||+++||.+
T Consensus 429 ~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~~LPv~~ 507 (537)
T PLN02223 429 I-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSE 507 (537)
T ss_pred c-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEEecchHH
Confidence 2 446789999999999999999999998666679999999999999999999999999999988889999999999999
Q ss_pred CCCcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 557 LKPGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 557 L~~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
|++|||||||+|.+|++++.++|||+|+|.
T Consensus 508 Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 508 LIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred hcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 999999999999999999999999999984
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=7.2e-142 Score=1153.83 Aligned_cols=546 Identities=31% Similarity=0.460 Sum_probs=444.4
Q ss_pred CCCChhhHHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCC--------ChHHHHHHHHHHHhhccccccccCCccCHHH
Q 007887 18 EAGPPEDVKEAFNKYAEGG-THMTAEQLRRFLLEVQGDDGG--------SISDAEKVVDQVLKTRHHLAKFTRHTLTLDD 88 (586)
Q Consensus 18 ~~~~r~el~~if~~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~--------~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~ 88 (586)
.+|+|+||+.||.+++++. .+||.++|.+||++.|+++.+ +..++..||++|+++... ..++.|+.+|
T Consensus 216 klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~---a~~gqms~dg 292 (1189)
T KOG1265|consen 216 KLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN---AEKGQMSTDG 292 (1189)
T ss_pred hcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh---hhccccchhh
Confidence 3599999999999999886 899999999999999999864 468899999999964221 1357899999
Q ss_pred HHHHHcCCCCCCCCCC--CCCCcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCC
Q 007887 89 FHHYLFSSDLNPPINY--DQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNST-KDD 165 (586)
Q Consensus 89 F~~~L~S~~~n~~~~~--~~v~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~-~~~ 165 (586)
|.+||++ ++|+++.+ ...++||+||||||||||||||||||+||.|.||||+|++||+.||||||||||||.+ .+|
T Consensus 293 f~ryl~g-dEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~E 371 (1189)
T KOG1265|consen 293 FVRYLMG-DENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEE 371 (1189)
T ss_pred hHHHhhC-CccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCC
Confidence 9999997 68999876 6678999999999999999999999999999999999999999999999999999943 357
Q ss_pred ceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-----CCCCCCC
Q 007887 166 VHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-----CLQEFPS 240 (586)
Q Consensus 166 piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPS 240 (586)
|||+||.|+|+.|.|+|||+||+++||+|||||||||+|||||+.||.+||+||++||||+|++.|.+ +...|||
T Consensus 372 PvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPs 451 (1189)
T KOG1265|consen 372 PVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPS 451 (1189)
T ss_pred ceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996633 3579999
Q ss_pred hhhhccceeeeccCCccccccc---cccCC--CC---C---CcCCCCCCCCCCC----------------CCCCCCcccc
Q 007887 241 PEELKYKIIISTKPPKEYLKAE---SKDGT--RS---N---SVKARDSDDDEWG----------------KEPQDLTADQ 293 (586)
Q Consensus 241 P~~Lk~KIlik~K~~~~~~~~~---~~~~~--~~---~---~~~~~~~~~~~~~----------------~~~~~~~~~~ 293 (586)
|++||+|||||+||........ ....+ +. . +..+.+.++...| .+.+......
T Consensus 452 P~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~ 531 (1189)
T KOG1265|consen 452 PEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAH 531 (1189)
T ss_pred HHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccc
Confidence 9999999999999853211110 00000 00 0 0000000000001 0000000000
Q ss_pred ccCCCCCCCcccccccc--------cCCCchhhhhhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcc
Q 007887 294 EDETKSDSDISDENEAY--------DNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHG 365 (586)
Q Consensus 294 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~ 365 (586)
.+.+++.++...+.+.+ .-....+.+++|+||+|.....+.+|.-+.+. ..+++|+||+|+++..++++++
T Consensus 532 ~E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~kr-N~~f~msSf~E~~~~~~Lk~~~ 610 (1189)
T KOG1265|consen 532 PELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEKR-NRHFEMSSFDESTGLGYLKKSP 610 (1189)
T ss_pred hhhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhhh-cceeeeeechhHHHHHHHHhCc
Confidence 00000000000000000 01112357889999999777666666655543 4678999999999999999999
Q ss_pred hhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccCCcccccccCCCCCCCCCCCC
Q 007887 366 TDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQMNVGPDGQ 445 (586)
Q Consensus 366 ~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr~~~~~~~ 445 (586)
.+||.||+++|+||||+|+|||||||+|+.|||+|||||||||||.|.+||||.|||..||+|||+|||++||.+. .
T Consensus 611 iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r 687 (1189)
T KOG1265|consen 611 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---R 687 (1189)
T ss_pred hHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---c
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985 4
Q ss_pred cCCCCCCCCc----ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcc--eecccccCCC-CCCccCc-
Q 007887 446 VFNPKEILPV----KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQI--MKKTKPKEDN-WTPVWEQ- 517 (586)
Q Consensus 446 ~f~p~~~~p~----~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~--k~kTkvi~nn-~NPvWNE- 517 (586)
.|||....++ ..++.|+|||||-|... ....||+|.+.|+|.|.. ++||+++.+| +||+|+|
T Consensus 688 ~fdPFse~~VdgvIA~t~sV~VISgqFLSdr----------kvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~ee 757 (1189)
T KOG1265|consen 688 QFDPFSESPVDGVIAATLSVTVISGQFLSDR----------KVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEE 757 (1189)
T ss_pred CcCCcccCcccceEEeeEEEEEEeeeecccc----------ccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccC
Confidence 7999987665 45799999999987421 124699999999999976 4589999877 9999985
Q ss_pred EEEEE-EEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 518 EFTFP-LTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGIRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 518 ~f~F~-v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~GyR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
.|.|. |..|+||+|||.||++. ..|||+..+||+.|+.|||||.|++..+.++..++|||.|+.
T Consensus 758 pfvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 758 PFVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred CcccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 69995 78999999999999875 579999999999999999999999999999999999999875
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=6e-135 Score=1089.94 Aligned_cols=530 Identities=31% Similarity=0.512 Sum_probs=419.3
Q ss_pred CccCHHHHHHHHHHHhCCCCCCh-HHHHHHHHHHHhhccccccccCCccCHHHHHHHHcCCCCCCCCCC--CCCCcc-cC
Q 007887 37 THMTAEQLRRFLLEVQGDDGGSI-SDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFSSDLNPPINY--DQVHQD-MT 112 (586)
Q Consensus 37 ~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S~~~n~~~~~--~~v~qD-M~ 112 (586)
.+++..+|++||..+|++.++++ ..+++++.+|-++ .......+.|++++|..||+| .+|+.+++ +.|..| |+
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D--~~re~~EPyl~v~EFv~fLFS-reNslWd~k~d~V~~d~Mn 312 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD--TMRETAEPYLFVDEFVTFLFS-RENSLWDSKYDAVDMDDMN 312 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh--hhhhccCcceeHHHHHHHHhh-cccccccccccccchhhhc
Confidence 57899999999999999988664 4456777777643 122335689999999999998 67999998 778755 99
Q ss_pred ccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhhccc
Q 007887 113 APLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAF 192 (586)
Q Consensus 113 ~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF 192 (586)
.|||||||+||||||||||||.++||.|+|+|||++||||||||||||++ +.||||||||+||||.|+||+.+||+|||
T Consensus 313 ~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd-~~pvIyHG~T~TtKIkf~DVlhtIkdhAF 391 (1267)
T KOG1264|consen 313 NPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPD-GKPVIYHGHTRTTKIKFDDVLHTIKDHAF 391 (1267)
T ss_pred CcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCC-CCceEEeccceeeeeehHHHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999998 57999999999999999999999999999
Q ss_pred ccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhhhccceeeeccCCcccccccc-ccCC---
Q 007887 193 SASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEELKYKIIISTKPPKEYLKAES-KDGT--- 267 (586)
Q Consensus 193 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~-~~~~--- 267 (586)
++|+||||||||.|||++||+.||+.+++||||+|++.|.+ +..+||||.|||+|||||+||.....+... ..+.
T Consensus 392 vtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd 471 (1267)
T KOG1264|consen 392 VTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDD 471 (1267)
T ss_pred eccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhccccc
Confidence 99999999999999999999999999999999999998855 478999999999999999999653211000 0000
Q ss_pred -------------CC------------------------CC--------cCCCCC-CC----CCC---------------
Q 007887 268 -------------RS------------------------NS--------VKARDS-DD----DEW--------------- 282 (586)
Q Consensus 268 -------------~~------------------------~~--------~~~~~~-~~----~~~--------------- 282 (586)
++ +. ++...+ ++ +.|
T Consensus 472 ~~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll 551 (1267)
T KOG1264|consen 472 HKNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLL 551 (1267)
T ss_pred chhhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHH
Confidence 00 00 000000 00 001
Q ss_pred -------CC--------C----CCCC------------------------------------------------------
Q 007887 283 -------GK--------E----PQDL------------------------------------------------------ 289 (586)
Q Consensus 283 -------~~--------~----~~~~------------------------------------------------------ 289 (586)
|. + +.+.
T Consensus 552 ~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF 631 (1267)
T KOG1264|consen 552 QEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEF 631 (1267)
T ss_pred HHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccce
Confidence 00 0 0000
Q ss_pred ----cc-----ccccC----------------------C----------CC-----------------------------
Q 007887 290 ----TA-----DQEDE----------------------T----------KS----------------------------- 299 (586)
Q Consensus 290 ----~~-----~~~~~----------------------~----------~~----------------------------- 299 (586)
+. ...++ | .+
T Consensus 632 ~m~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~ 711 (1267)
T KOG1264|consen 632 EMRLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTS 711 (1267)
T ss_pred EEEecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccH
Confidence 00 00000 0 00
Q ss_pred -------------------------------------CC------Cc-c------c--------------------ccc-
Q 007887 300 -------------------------------------DS------DI-S------D--------------------ENE- 308 (586)
Q Consensus 300 -------------------------------------~~------~~-~------~--------------------~~~- 308 (586)
+. +. + + ++|
T Consensus 712 ~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DEL 791 (1267)
T KOG1264|consen 712 AFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDEL 791 (1267)
T ss_pred HHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccc
Confidence 00 00 0 0 000
Q ss_pred ----------------------------------------------------------------------------cccC
Q 007887 309 ----------------------------------------------------------------------------AYDN 312 (586)
Q Consensus 309 ----------------------------------------------------------------------------~~~~ 312 (586)
..++
T Consensus 792 SFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n 871 (1267)
T KOG1264|consen 792 SFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKN 871 (1267)
T ss_pred cccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccC
Confidence 0000
Q ss_pred -----------------------------------------------------CCchhhhhhhcceeeccccccCCcccc
Q 007887 313 -----------------------------------------------------ERPLEAADYKRLIAIHAGKPKGGLKDV 339 (586)
Q Consensus 313 -----------------------------------------------------~~~~~~~~~~~li~~~~~~~~~~~~~~ 339 (586)
....++.|||+||+|+...|+.. .+.
T Consensus 872 ~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~-~~~ 950 (1267)
T KOG1264|consen 872 QKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTK-DNL 950 (1267)
T ss_pred CcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcc-ccc
Confidence 00124556677777776666321 110
Q ss_pred cccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeee
Q 007887 340 LKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMH 419 (586)
Q Consensus 340 ~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~ 419 (586)
.++....|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||+++|+||||||||||||.|.+||||+
T Consensus 951 --~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNq 1028 (1267)
T KOG1264|consen 951 --ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQ 1028 (1267)
T ss_pred --ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhH
Confidence 012234589999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCcccccccCCCCCCCCCCCCcCCCCCCC----CcceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecC
Q 007887 420 GMFRSNGGCGYVKKPDLQMNVGPDGQVFNPKEIL----PVKKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGV 495 (586)
Q Consensus 420 g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~ 495 (586)
|+|+.||+|||||||++||.. .|||..+. -.+.+|.|+||.|+.|+.. . .+..-|||+|+|.|.
T Consensus 1029 a~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~--g-----r~i~cPfVevEiiGa 1096 (1267)
T KOG1264|consen 1029 ALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPKL--G-----RSIACPFVEVEIIGA 1096 (1267)
T ss_pred HHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeeccccccC--C-----CCccCCcEEEEEecc
Confidence 999999999999999999974 58886531 1246799999999998742 1 133458999999999
Q ss_pred CCCcceecccccCC-CCCCccC-cEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcceEEEccCCCCCc
Q 007887 496 PADQIMKKTKPKED-NWTPVWE-QEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGIRAVPLSDRKGEM 573 (586)
Q Consensus 496 p~D~~k~kTkvi~n-n~NPvWN-E~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~GyR~ipL~d~~g~~ 573 (586)
+.|..+++|++|.+ ++||+|| |+|+|.|.+|+.|+|||.|+|+|+.+...||||+++||.+|+.|||.|||++...+.
T Consensus 1097 ~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ySEd 1176 (1267)
T KOG1264|consen 1097 EYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNGYSED 1176 (1267)
T ss_pred ccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccCchhh
Confidence 99999888877655 4999999 999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCeEEEEEEEE
Q 007887 574 LNSVRLLMRFDF 585 (586)
Q Consensus 574 ~~~atL~v~~~f 585 (586)
++.|+|+|.+++
T Consensus 1177 lELaSLLv~i~m 1188 (1267)
T KOG1264|consen 1177 LELASLLVFIEM 1188 (1267)
T ss_pred hhhhhheeeeEe
Confidence 999999999986
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=5.6e-112 Score=840.65 Aligned_cols=257 Identities=34% Similarity=0.536 Sum_probs=240.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-cCCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-ECLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
++|||++|+|||||||||||+++||++||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999999752
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
++++|++|+.|..+++++++......++..
T Consensus 150 --------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~~~~~~ 179 (258)
T cd08629 150 --------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGTSGQAF 179 (258)
T ss_pred --------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhhcCCCc
Confidence 136788898888888888887765534556
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 180 ~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08629 180 YEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 258 (258)
T ss_pred ceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhchhcCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999987
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=8e-111 Score=829.38 Aligned_cols=252 Identities=35% Similarity=0.526 Sum_probs=227.3
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||||+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC--cCCCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC--ECLQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~-------- 151 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSR-------- 151 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCch--------
Confidence 999999999999999999999999999999999999999998652 3457899999999999999998531
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
++++|+.+..+..+.++.... ..
T Consensus 152 ------------------------------------------------------~Ls~l~~y~~~~~~~~~~~~~---~~ 174 (254)
T cd08633 152 ------------------------------------------------------ALSDLVKYTKSVRVHDIETEA---TS 174 (254)
T ss_pred ------------------------------------------------------hhhHHhhhcccCCcCcccccc---cc
Confidence 233344444333333333221 13
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 175 ~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 254 (254)
T cd08633 175 SWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSAN 254 (254)
T ss_pred ceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcccccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999987
No 11
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=1.2e-110 Score=833.65 Aligned_cols=256 Identities=36% Similarity=0.598 Sum_probs=238.7
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC--CCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC--LQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
|+|||++|+|||||||||||+++||++||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998751
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
++++|++|+.|+.+++++++...... ..
T Consensus 151 ---------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~~~-~~ 178 (258)
T cd08630 151 ---------------------------------------------------ISPELSALAVYCQATRLRTLEPAPVQ-PQ 178 (258)
T ss_pred ---------------------------------------------------chHHHHhhHhhcccccCCCcchhhhc-CC
Confidence 25789999999888777777665321 22
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
..+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 179 ~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~N 258 (258)
T cd08630 179 PCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVN 258 (258)
T ss_pred CccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999987
No 12
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.6e-110 Score=832.80 Aligned_cols=254 Identities=36% Similarity=0.548 Sum_probs=230.2
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeccccccceeHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELMKCLKS 186 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (586)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++|||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhcccccCCCCeEEEecCCC-CHHHHHHHHHHHHHHhhcccccCCCcC-----CCCCCChhhhccceeeeccCCccccc
Q 007887 187 IKEHAFSASPYPVVITLEDHL-TPHLQAKVAKMLAETFGDMLFVPQCEC-----LQEFPSPEELKYKIIISTKPPKEYLK 260 (586)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (586)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~---- 156 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYE---- 156 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccc----
Confidence 999999999999999999999 799999999999999999999977432 4789999999999999998731
Q ss_pred cccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCccccc
Q 007887 261 AESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVL 340 (586)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~ 340 (586)
++++|+.|..+..+.+|....
T Consensus 157 -----------------------------------------------------------els~lv~y~~~~kf~~f~~~~ 177 (261)
T cd08624 157 -----------------------------------------------------------EMSSLVNYIQPTKFVSFEFSA 177 (261)
T ss_pred -----------------------------------------------------------cchhhhcccCCcCCCCccccc
Confidence 245555665555555555443
Q ss_pred ccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeee
Q 007887 341 KVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHG 420 (586)
Q Consensus 341 ~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g 420 (586)
... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 178 ~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M~LN~G 256 (261)
T cd08624 178 QKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPMQQNMA 256 (261)
T ss_pred ccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhhhhhcc
Confidence 322 2357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccC
Q 007887 421 MFRSN 425 (586)
Q Consensus 421 ~F~~N 425 (586)
||++|
T Consensus 257 ~F~~n 261 (261)
T cd08624 257 LFEFN 261 (261)
T ss_pred cccCC
Confidence 99987
No 13
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=1.9e-110 Score=831.04 Aligned_cols=256 Identities=34% Similarity=0.537 Sum_probs=235.6
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
|||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC--CCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC--LQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
|+|||++|+|||||||||||+++||++||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998741
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
++++|++|+.|..+..+.++...... ..
T Consensus 151 ---------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~~~-~~ 178 (258)
T cd08631 151 ---------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSREH-YH 178 (258)
T ss_pred ---------------------------------------------------ccHHHHHhHhhhcccccCCccccccc-Cc
Confidence 24668888888777666666543221 12
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 179 ~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08631 179 FYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDGLFRQN 258 (258)
T ss_pred cceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcchhcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=2.2e-110 Score=830.12 Aligned_cols=255 Identities=36% Similarity=0.558 Sum_probs=232.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC--CCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC--LQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k---------- 149 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------
Confidence 99999999999999999999999999999999999999999977443 579999999999999999862
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
++++|++|+.|..+..+.++...... ..
T Consensus 150 ---------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~~~-~~ 177 (257)
T cd08595 150 ---------------------------------------------------IAKALSDLVIYTKSEKFCSFTHSRDN-QH 177 (257)
T ss_pred ---------------------------------------------------cChhHHHHhhhcCCcCCCCccccccc-cc
Confidence 12457778777665554555433221 12
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 178 ~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~N 257 (257)
T cd08595 178 SYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNGKFLDN 257 (257)
T ss_pred cceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcCcccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999987
No 15
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=2e-110 Score=824.85 Aligned_cols=251 Identities=34% Similarity=0.542 Sum_probs=225.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCC--CcCCCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQ--CECLQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++ .+....||||++||||||||+|++.
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~--------- 150 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLC--------- 150 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCc---------
Confidence 99999999999999999999999999999999999999998765 2346789999999999999999852
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
+++++|+.++.+..+.++.+. ..
T Consensus 151 -----------------------------------------------------~els~l~~~~~~~~~~~~~~~----~~ 173 (253)
T cd08632 151 -----------------------------------------------------RDLSDLVVYTNSVAAQDIVDD----GS 173 (253)
T ss_pred -----------------------------------------------------HHHHhhhhhccCcccccchhc----CC
Confidence 123444444433332222211 12
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
..+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 174 ~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g~F~~n 253 (253)
T cd08632 174 TGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRAKFMVN 253 (253)
T ss_pred cccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcccccCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999987
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=5.6e-110 Score=825.92 Aligned_cols=249 Identities=35% Similarity=0.542 Sum_probs=228.5
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||||||||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999986 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-----cCCCCCCChhhhccceeeeccCCccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-----ECLQEFPSPEELKYKIIISTKPPKEYLKAE 262 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-----~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (586)
++|||++|+||||||||||||.+||++||+||+++|||+|++++. .....||||++||||||||+|++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~------- 152 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------
Confidence 999999999999999999999999999999999999999998752 12568999999999999999863
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCccccccc
Q 007887 263 SKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKV 342 (586)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~ 342 (586)
++|++|+.|..+..+.++..
T Consensus 153 --------------------------------------------------------~els~l~~y~~~~k~~~~~~---- 172 (254)
T cd08596 153 --------------------------------------------------------PELSDLVIYCQAVKFPGLST---- 172 (254)
T ss_pred --------------------------------------------------------HHHHHHHHHhcCccCCCCCc----
Confidence 34566666554444444442
Q ss_pred CCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeec
Q 007887 343 EPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMF 422 (586)
Q Consensus 343 ~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F 422 (586)
+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||
T Consensus 173 -~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F 251 (254)
T cd08596 173 -PKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHLNAAMF 251 (254)
T ss_pred -cccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHhhhchh
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC
Q 007887 423 RSN 425 (586)
Q Consensus 423 ~~N 425 (586)
++|
T Consensus 252 ~~N 254 (254)
T cd08596 252 EAN 254 (254)
T ss_pred cCC
Confidence 987
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.9e-109 Score=823.41 Aligned_cols=251 Identities=34% Similarity=0.541 Sum_probs=222.9
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeccccccceeHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELMKCLKS 186 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (586)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC-----CCCCCChhhhccceeeeccCCcccccc
Q 007887 187 IKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC-----LQEFPSPEELKYKIIISTKPPKEYLKA 261 (586)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (586)
|++|||++|+||||||||||||++||++||+||+++|||+|+.++.+. ...||||++||||||||+|+..+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~---- 156 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSS---- 156 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhh----
Confidence 999999999999999999999999999999999999999999976432 46899999999999999987321
Q ss_pred ccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccc
Q 007887 262 ESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLK 341 (586)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~ 341 (586)
|++|..+..+.++....+
T Consensus 157 --------------------------------------------------------------L~~y~~~~~~~~~~~~~~ 174 (257)
T cd08626 157 --------------------------------------------------------------LVNYAQPVKFQGFDVAEE 174 (257)
T ss_pred --------------------------------------------------------------hhcccccCCCCCcCchhh
Confidence 111211111222222221
Q ss_pred cCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeee
Q 007887 342 VEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGM 421 (586)
Q Consensus 342 ~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~ 421 (586)
.. ..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 ~~-~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 253 (257)
T cd08626 175 RN-IHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGK 253 (257)
T ss_pred cC-CCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhhcc
Confidence 11 23578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 007887 422 FRSN 425 (586)
Q Consensus 422 F~~N 425 (586)
|+.|
T Consensus 254 F~~n 257 (257)
T cd08626 254 FEYN 257 (257)
T ss_pred ccCC
Confidence 9987
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.7e-109 Score=822.69 Aligned_cols=251 Identities=35% Similarity=0.567 Sum_probs=225.4
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCceEeeccccccceeHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNST-KDDVHVLHGRTLTTPVELMKCLKS 186 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (586)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ .+|||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhcccccCCCCeEEEecCCC-CHHHHHHHHHHHHHHhhcccccCCCc-----CCCCCCChhhhccceeeeccCCccccc
Q 007887 187 IKEHAFSASPYPVVITLEDHL-TPHLQAKVAKMLAETFGDMLFVPQCE-----CLQEFPSPEELKYKIIISTKPPKEYLK 260 (586)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (586)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+ ....||||++||||||||+|+.
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkL----- 155 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKM----- 155 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccch-----
Confidence 999999999999999999999 59999999999999999999997743 3468999999999999999863
Q ss_pred cccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCccccc
Q 007887 261 AESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVL 340 (586)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~ 340 (586)
++|++|+.+..+.+|....
T Consensus 156 -------------------------------------------------------------s~Lv~y~~~v~f~~f~~~~ 174 (258)
T cd08623 156 -------------------------------------------------------------SNLVNYIQPVKFESFEASK 174 (258)
T ss_pred -------------------------------------------------------------hcccccccCcccCCccccc
Confidence 2233344333444444322
Q ss_pred ccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeee
Q 007887 341 KVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHG 420 (586)
Q Consensus 341 ~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g 420 (586)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~LN~G 253 (258)
T cd08623 175 KR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMG 253 (258)
T ss_pred cc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcchhhhcc
Confidence 21 12457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccC
Q 007887 421 MFRSN 425 (586)
Q Consensus 421 ~F~~N 425 (586)
||+.|
T Consensus 254 ~F~~~ 258 (258)
T cd08623 254 MYEYN 258 (258)
T ss_pred cccCC
Confidence 99987
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=7.2e-109 Score=819.25 Aligned_cols=251 Identities=36% Similarity=0.550 Sum_probs=223.7
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCC-CCceEeeccccccceeHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTK-DDVHVLHGRTLTTPVELMKCLKS 186 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~-~~piv~HG~Tlts~i~f~dvi~a 186 (586)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ +||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC-----CCCCCChhhhccceeeeccCCcccccc
Q 007887 187 IKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC-----LQEFPSPEELKYKIIISTKPPKEYLKA 261 (586)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (586)
||+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls----- 155 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLS----- 155 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccch-----
Confidence 999999999999999999999999999999999999999999987432 3689999999999999998732
Q ss_pred ccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccc
Q 007887 262 ESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLK 341 (586)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~ 341 (586)
+|++|..+..+.++....+
T Consensus 156 -------------------------------------------------------------~L~~y~~~~~f~~~~~~~~ 174 (257)
T cd08591 156 -------------------------------------------------------------SLVNYIQPVKFQGFEVAEK 174 (257)
T ss_pred -------------------------------------------------------------hhhccccCCCCCCccchhh
Confidence 1122221111222222221
Q ss_pred cCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeee
Q 007887 342 VEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGM 421 (586)
Q Consensus 342 ~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~ 421 (586)
. ...++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 ~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~lN~g~ 253 (257)
T cd08591 175 R-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGK 253 (257)
T ss_pred c-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHHhhccc
Confidence 1 123688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 007887 422 FRSN 425 (586)
Q Consensus 422 F~~N 425 (586)
|++|
T Consensus 254 F~~N 257 (257)
T cd08591 254 FEYN 257 (257)
T ss_pred ccCC
Confidence 9987
No 20
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=6.1e-109 Score=823.35 Aligned_cols=256 Identities=39% Similarity=0.597 Sum_probs=235.7
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+||||+|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +|||||||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35799999999999999998741
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
+.++|++|+.+..+..+.++.+... ....
T Consensus 150 --------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~-~~~~ 178 (257)
T cd08593 150 --------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE-NYHF 178 (257)
T ss_pred --------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc-cCCC
Confidence 2356888887766555666665442 2345
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 179 ~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~F~~N 257 (257)
T cd08593 179 YEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGLFRQN 257 (257)
T ss_pred ceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhchhcCC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999987
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.1e-108 Score=822.94 Aligned_cols=250 Identities=36% Similarity=0.556 Sum_probs=224.6
Q ss_pred cccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCceEeeccccccceeHHHHHHHH
Q 007887 109 QDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNST-KDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++||+||||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999952 4689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCC-CHHHHHHHHHHHHHHhhcccccCCCc-----CCCCCCChhhhccceeeeccCCcccccc
Q 007887 188 KEHAFSASPYPVVITLEDHL-TPHLQAKVAKMLAETFGDMLFVPQCE-----CLQEFPSPEELKYKIIISTKPPKEYLKA 261 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (586)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklS----- 156 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMS----- 156 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeecc-----
Confidence 99999999999999999999 69999999999999999999997743 24689999999999999998742
Q ss_pred ccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccc
Q 007887 262 ESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLK 341 (586)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~ 341 (586)
+|++|+.+.++.++.+...
T Consensus 157 -------------------------------------------------------------dLvvy~~~vkf~~f~~~~~ 175 (258)
T cd08625 157 -------------------------------------------------------------TLVNYIEPVKFKSFEAAAK 175 (258)
T ss_pred -------------------------------------------------------------cccceecccccCCchhhhc
Confidence 1233333333334433222
Q ss_pred cCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeee
Q 007887 342 VEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGM 421 (586)
Q Consensus 342 ~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~ 421 (586)
. ...++|+||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+||
T Consensus 176 ~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~LN~G~ 254 (258)
T cd08625 176 R-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGV 254 (258)
T ss_pred c-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchhhhccc
Confidence 1 124678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 007887 422 FRSN 425 (586)
Q Consensus 422 F~~N 425 (586)
|++|
T Consensus 255 F~~n 258 (258)
T cd08625 255 FEYN 258 (258)
T ss_pred ccCC
Confidence 9987
No 22
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=3.5e-108 Score=814.26 Aligned_cols=253 Identities=38% Similarity=0.630 Sum_probs=230.4
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ +||+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-cCCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-ECLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~----------- 148 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL----------- 148 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------
Confidence 999999999999999999999999999999999999999998664 44689999999999999999863
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
++++|++|+.|+.+..+. +.. .. .+..
T Consensus 149 --------------------------------------------------~~~eLs~l~~y~~~~~~~-~~~-~~-~~~~ 175 (254)
T cd08628 149 --------------------------------------------------IAIELSDLVVYCKPTSKT-KDN-LE-NPDF 175 (254)
T ss_pred --------------------------------------------------CCHHHHhhHhhhcccccc-cCC-cc-cccc
Confidence 136688888887654321 111 11 1234
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+|||++|
T Consensus 176 ~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~n 254 (254)
T cd08628 176 KEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254 (254)
T ss_pred cccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhhccCC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999987
No 23
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=1.2e-107 Score=796.01 Aligned_cols=225 Identities=38% Similarity=0.614 Sum_probs=215.7
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
|||||+||+||||||||||||+||||.|+||+|||++||++||||||||||||++ +||||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCC--CcCCCCCCChhhhccceeeeccCCcccccccccc
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQ--CECLQEFPSPEELKYKIIISTKPPKEYLKAESKD 265 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (586)
|+|||++|+||||||||||||++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999741
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCC
Q 007887 266 GTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPD 345 (586)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~ 345 (586)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 346 KVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 346 ~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 149 -~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~N 227 (227)
T cd08594 149 -WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRAKFRAN 227 (227)
T ss_pred -ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcccccCC
Confidence 2679999999999999999999999999999999999999999999999999999999999999999999999999987
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=4.7e-106 Score=803.80 Aligned_cols=259 Identities=36% Similarity=0.531 Sum_probs=236.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCC-cCCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQC-ECLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999874 4567999999999999999998521
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
.+++++|++|+.|..+..+.++..... ....
T Consensus 151 ------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~-~~~~ 181 (260)
T cd08597 151 ------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ-NQKY 181 (260)
T ss_pred ------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc-ccCc
Confidence 113577889988876655555554322 2234
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 182 ~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~F~~N 260 (260)
T cd08597 182 WEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGKFLEN 260 (260)
T ss_pred ccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhcccccCC
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999987
No 25
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=7.5e-105 Score=779.14 Aligned_cols=225 Identities=44% Similarity=0.698 Sum_probs=216.6
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ +||+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC-CCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC-LQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+|||||||||||+.+||++||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 48999999999999999741
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 148 ~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~n 226 (226)
T cd08558 148 YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGKFEQN 226 (226)
T ss_pred ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhcccccCC
Confidence 2579999999999999999999999999999999999999999999999999999999999999999999999999976
No 26
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.6e-104 Score=773.71 Aligned_cols=226 Identities=38% Similarity=0.675 Sum_probs=211.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
.+||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I 79 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTI 79 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999987 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+||||||||||||++||.+||++|+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------- 149 (229)
T cd08627 80 KEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------- 149 (229)
T ss_pred HHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------
Confidence 9999999999999999999999999999999999999999997744 46799999999999999998620
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
.
T Consensus 150 ----------------------------------------------------~--------------------------- 150 (229)
T cd08627 150 ----------------------------------------------------R--------------------------- 150 (229)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred eeEeeccHHHHHHHHH-HcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeeccc
Q 007887 347 VRRLSLSEQTLEKAAE-SHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRS 424 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~ 424 (586)
+++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.
T Consensus 151 -~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~ 228 (229)
T cd08627 151 -DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFML 228 (229)
T ss_pred -ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCcccC
Confidence 136889999999885 45689999999999999999999999999999999999999999999999999999999974
No 27
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=3e-104 Score=777.22 Aligned_cols=229 Identities=40% Similarity=0.682 Sum_probs=216.2
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999985 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+|||||||||||+.+||++||+||+++|||+|++++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3579999999999999998750 0
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
+ ..
T Consensus 150 ----------------------------------------------------~-------------------------~~ 152 (231)
T cd08598 150 ----------------------------------------------------K-------------------------TP 152 (231)
T ss_pred ----------------------------------------------------C-------------------------CC
Confidence 0 01
Q ss_pred eeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeeccc
Q 007887 347 VRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRS 424 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~ 424 (586)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++
T Consensus 153 ~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~ 230 (231)
T cd08598 153 NHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAMFAG 230 (231)
T ss_pred ceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhcccccC
Confidence 257999999999999999999999999999999999999999999999999999999999999999999999999985
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=2e-103 Score=769.50 Aligned_cols=227 Identities=41% Similarity=0.682 Sum_probs=215.4
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
+|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
++|||++|+||||||||||||.+||++||+||+++|||+|++++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987643 4689999999999999998741
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
.
T Consensus 149 -------------------------------------------------------------------------------~ 149 (229)
T cd08592 149 -------------------------------------------------------------------------------F 149 (229)
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred eeEeeccHHHHHHHH-HHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAA-ESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~-~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 150 ~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~N 229 (229)
T cd08592 150 YEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFMLN 229 (229)
T ss_pred ccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcccccCC
Confidence 245799999999999 5889999999999999999999999999999999999999999999999999999999999987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=2.7e-102 Score=763.09 Aligned_cols=226 Identities=65% Similarity=1.082 Sum_probs=215.8
Q ss_pred CcccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSI 187 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (586)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+||||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcC-CCCCCChhhhccceeeeccCCccccccccccC
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCEC-LQEFPSPEELKYKIIISTKPPKEYLKAESKDG 266 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (586)
|+|||++|+|||||||||||+.+||.+||++|+++|||+|+.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999997630
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCcccccccCCCc
Q 007887 267 TRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVLKVEPDK 346 (586)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 346 (586)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEeeccHHHHHHHHH-HcchhhHHhhccccceEecCCCCCCCCCCCCcccccccceeeeeccccCCcceeeeeeecccC
Q 007887 347 VRRLSLSEQTLEKAAE-SHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 347 ~~~~S~sE~~~~k~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~QmvALN~Qt~d~~m~LN~g~F~~N 425 (586)
.+++||+|+++.++.+ +++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 149 ~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 228 (228)
T cd08599 149 VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRGKFRAN 228 (228)
T ss_pred ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcccccCC
Confidence 2568999999999996 889999999999999999999999999999999999999999999999999999999999987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=1.3e-64 Score=518.02 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=213.0
Q ss_pred CcccCccccceeeeccccccccCCCCC-----CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHH
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLS-----SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMK 182 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~-----g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (586)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999875 579999999999 999999
Q ss_pred HHHHHhhcccccCCCCeEEEecCCCCH--HHHHHHHHHHHHHhhcccccCCCcCCCCCCChhhhccceeeeccCCccccc
Q 007887 183 CLKSIKEHAFSASPYPVVITLEDHLTP--HLQAKVAKMLAETFGDMLFVPQCECLQEFPSPEELKYKIIISTKPPKEYLK 260 (586)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (586)
||++|+++||..++||||||||+||+. +||.+||++|+++||++|++|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998766567899999999999999987531100
Q ss_pred cccccCCCCCCcCCCCCCCCCCCCCCCCCccccccCCCCCCCcccccccccCCCchhhhhhhcceeeccccccCCccccc
Q 007887 261 AESKDGTRSNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLEAADYKRLIAIHAGKPKGGLKDVL 340 (586)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~ 340 (586)
. + .+...|. .++....
T Consensus 159 ~------------~--~~~~~~~--------------------------------------------------~~~~~~~ 174 (274)
T cd00137 159 T------------G--SSNDTGF--------------------------------------------------VSFEFST 174 (274)
T ss_pred c------------c--cccccCc--------------------------------------------------CCccccc
Confidence 0 0 0000000 0000000
Q ss_pred ccCCCceeEeeccHHHHHH----HHHHcchhhHHhhccccceEecCCCC---------CCCCCCCCcccccc---cceee
Q 007887 341 KVEPDKVRRLSLSEQTLEK----AAESHGTDLVRFTQKNILRIYPKGTR---------FTSSNYKPLVGWMH---GTQMV 404 (586)
Q Consensus 341 ~~~~~~~~~~S~sE~~~~k----~~~~~~~~~~~~~~~~l~RvYP~g~R---------idSSN~~P~~~W~~---G~Qmv 404 (586)
. .....+++|++|.++.. +..+...+++.||+++|+|+||+|+| ++||||+|+.+|++ |||||
T Consensus 175 ~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~g~qiV 253 (274)
T cd00137 175 Q-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPAGCGIV 253 (274)
T ss_pred c-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccCCceEE
Confidence 0 01123578999988854 33455667899999999999999999 99999999999999 99999
Q ss_pred eeccccCCcceeeeeeecccC
Q 007887 405 AFNMQGYGRAMWLMHGMFRSN 425 (586)
Q Consensus 405 ALN~Qt~d~~m~LN~g~F~~N 425 (586)
||||||.|++|+||+|+|+.|
T Consensus 254 aldfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 254 ILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred EeeCcCCCccHHHHhhhhccC
Confidence 999999999999999999976
No 31
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=1.9e-46 Score=331.78 Aligned_cols=115 Identities=43% Similarity=0.664 Sum_probs=106.4
Q ss_pred hcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccccc
Q 007887 322 KRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGT 401 (586)
Q Consensus 322 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~G~ 401 (586)
++||+|+.++++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47899998888887777654322 56899999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccccCCcceeeeeeecccCCcccccccCCCC
Q 007887 402 QMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQ 437 (586)
Q Consensus 402 QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~l 437 (586)
|||||||||.|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
No 32
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=5.1e-47 Score=337.93 Aligned_cols=118 Identities=36% Similarity=0.610 Sum_probs=91.2
Q ss_pred hhhcceeeccccccCCcccccccCCCceeEeeccHHHHHHHHHHcchhhHHhhccccceEecCCCCCCCCCCCCcccccc
Q 007887 320 DYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMH 399 (586)
Q Consensus 320 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~k~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN~~P~~~W~~ 399 (586)
||++|++|+.+..+.++...... ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999999888777666553332 12568999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeccccCCcceeeeeeecccCCcccccccCCCCC
Q 007887 400 GTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKPDLQM 438 (586)
Q Consensus 400 G~QmvALN~Qt~d~~m~LN~g~F~~NG~cGYVLKP~~lr 438 (586)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=7.1e-41 Score=308.13 Aligned_cols=134 Identities=49% Similarity=0.859 Sum_probs=128.2
Q ss_pred cccCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHh
Q 007887 109 QDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIK 188 (586)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (586)
|||++||+||||++||||||+|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 5699999999999999999999999
Q ss_pred hcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc-CCCCCCChhh
Q 007887 189 EHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE-CLQEFPSPEE 243 (586)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~ 243 (586)
++||..+++||||+||+||+.++|.+||++|+++||++|+.++.. ....+|||+|
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=1.2e-37 Score=290.67 Aligned_cols=143 Identities=31% Similarity=0.561 Sum_probs=129.1
Q ss_pred cCccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhhc
Q 007887 111 MTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEH 190 (586)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 190 (586)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ ++|.||||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 469999999999999999999999999
Q ss_pred ccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc---CCCCCCChhhhccceeeeccC
Q 007887 191 AFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE---CLQEFPSPEELKYKIIISTKP 254 (586)
Q Consensus 191 AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (586)
+|..+++||||++++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999998744 468999999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=9.3e-22 Score=202.96 Aligned_cols=146 Identities=27% Similarity=0.412 Sum_probs=127.6
Q ss_pred cccCccccceeeeccccccccC------------CCC--CCCCChHHHHHHHhcCCcEEEEEeecCCC------------
Q 007887 109 QDMTAPLSHYFIYTGHNSYLTG------------NQL--SSDCSDVPIIKALKRGVRVVELDIWPNST------------ 162 (586)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~G------------~Ql--~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~------------ 162 (586)
.+.+.||+||+|-.|||+|..| +|+ ....+-.....+|..|+|-+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3568999999999999999998 777 34455567889999999999999996543
Q ss_pred -------CCCceEeecccc---ccceeHHHHHHHHhhcccc-cCCCCeEEEecCCCCH------------HHHHHHHHHH
Q 007887 163 -------KDDVHVLHGRTL---TTPVELMKCLKSIKEHAFS-ASPYPVVITLEDHLTP------------HLQAKVAKML 219 (586)
Q Consensus 163 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~ma~~l 219 (586)
++...|+|+.++ |+...|.+||..||+++|. .++|||+|-||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345689999998 8999999999999999997 7999999999999988 7899999999
Q ss_pred HHHhhc-ccccCCC-----cCC------CCCCChhhhccceeeeccC
Q 007887 220 AETFGD-MLFVPQC-----ECL------QEFPSPEELKYKIIISTKP 254 (586)
Q Consensus 220 ~~i~Gd-~L~~~~~-----~~~------~~lPSP~~Lk~KIlik~K~ 254 (586)
+++||+ +|++|+. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 222 6899999999999999764
No 36
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.81 E-value=6.7e-19 Score=159.58 Aligned_cols=125 Identities=44% Similarity=0.636 Sum_probs=108.9
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC-CcceecccccCCCC-CCccCcEEEEEEEcCCccEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA-DQIMKKTKPKEDNW-TPVWEQEFTFPLTVPELALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~-D~~k~kTkvi~nn~-NPvWNE~f~F~v~~pela~Lrf~ 534 (586)
..|+|+|++|++|+... .+..+..||||+|.+.+.+. +..+.||+++.++. ||.|||+|.|.+..++.++|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 46999999999997521 11245679999999988665 56778999988875 99999999999998888899999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
|||.+.. ++++||++.+++++|..||++++|++..|.+...++|+|++++.
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999876 79999999999999999999999999999988889999999974
No 37
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.77 E-value=1.3e-18 Score=177.62 Aligned_cols=143 Identities=25% Similarity=0.357 Sum_probs=121.4
Q ss_pred CcccCccccceeeeccccccccCCCCC----------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-
Q 007887 108 HQDMTAPLSHYFIYTGHNSYLTGNQLS----------SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT- 176 (586)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~G~Ql~----------g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts- 176 (586)
..||+.||+||+|-.|||+|..+..-. +..-.-.+..+|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 468999999999999999999876532 233334578999999999999999864 4689999987654
Q ss_pred ------ceeHHHHHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc----CCCCCCChhhhc-
Q 007887 177 ------PVELMKCLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE----CLQEFPSPEELK- 245 (586)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~----~~~~lPSP~~Lk- 245 (586)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++|+.|+.. .....|+.++|+
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888999999999999999998632 146789999996
Q ss_pred -cceeeec
Q 007887 246 -YKIIIST 252 (586)
Q Consensus 246 -~KIlik~ 252 (586)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 8877764
No 38
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.72 E-value=3.4e-17 Score=147.84 Aligned_cols=103 Identities=24% Similarity=0.391 Sum_probs=84.3
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCC--CCcceecccccCCCCCCccCcEEEEEEEc---CCccEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVP--ADQIMKKTKPKEDNWTPVWEQEFTFPLTV---PELALLR 532 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p--~D~~k~kTkvi~nn~NPvWNE~f~F~v~~---pela~Lr 532 (586)
+|+|+|++|++|+.. + .+.+||||+|++.|.. ....++||+++.+++||+|||+|.|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 389999999999642 2 2668999999998732 32345689999999999999999999974 3457899
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCCcc---eEEEcc
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPLS 567 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~ 567 (586)
|.|+|+|..+++++||++++|+.++..+- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998764 567774
No 39
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.67 E-value=6.6e-16 Score=138.85 Aligned_cols=114 Identities=26% Similarity=0.427 Sum_probs=92.8
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++|+.. +..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~~------~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITKG------DLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCcc------CCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 78999999999642 334678999999986532 3567999999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCcce---EEEccCCCCCcCCCeEEEEEEEEC
Q 007887 539 DMSEKDDFAGQTCLPVSELKPGIR---AVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~GyR---~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
|.. ++++||++.++++.+..|.+ +++|.+. +.+.|.++|+++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~~ 118 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLLE 118 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEee
Confidence 987 79999999999999999865 5677542 245788888763
No 40
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.65 E-value=1.2e-15 Score=138.67 Aligned_cols=115 Identities=23% Similarity=0.346 Sum_probs=93.3
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc-----CCccEEEE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV-----PELALLRI 533 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~-----pela~Lrf 533 (586)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 4799999999964 23345689999999853 56799999999999999999999865 34578999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCC--Cc---ceEEEccCCCCCcC-CCeEEEEEEE
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELK--PG---IRAVPLSDRKGEML-NSVRLLMRFD 584 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~--~G---yR~ipL~d~~g~~~-~~atL~v~~~ 584 (586)
.|||++..+++++||++.++++.+. .| .+|.+|.+..++.- ..+.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 45 47899987666433 3467887763
No 41
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.64 E-value=3.6e-16 Score=159.79 Aligned_cols=144 Identities=25% Similarity=0.298 Sum_probs=124.8
Q ss_pred ccCccccceeeeccccccccCCCCC-------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHH
Q 007887 110 DMTAPLSHYFIYTGHNSYLTGNQLS-------SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMK 182 (586)
Q Consensus 110 DM~~PLs~YfI~SSHNTYL~G~Ql~-------g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (586)
+.+.||++|.|-.|||+|..+.... +...-..+...|..|+|++|||||..++.+++.|+||.......+|+|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5688999999999999998877642 233344578999999999999999875446789999988887899999
Q ss_pred HHHHHhhcccccCCCCeEEEecCCCCHHH---HHHHHHHHHHHhhcccccCCCcCCCCCCChhhhc-cceeeeccC
Q 007887 183 CLKSIKEHAFSASPYPVVITLEDHLTPHL---QAKVAKMLAETFGDMLFVPQCECLQEFPSPEELK-YKIIISTKP 254 (586)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (586)
|++.|+++.......+|||+||.+++... +..+++.|+++||+.++.++ ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999989999999999999876 89999999999999999875 3346789999999 999998654
No 42
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.64 E-value=3e-15 Score=134.95 Aligned_cols=116 Identities=26% Similarity=0.387 Sum_probs=94.8
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ....||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 38999999999964 23346689999999864 34679999999999999999999986543 679999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
++..+++++||++.+++..+..| ..+++|.+..+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 99888899999999999999855 3588999877643 34578887766
No 43
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.63 E-value=2e-15 Score=136.75 Aligned_cols=97 Identities=25% Similarity=0.360 Sum_probs=82.8
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEE-Ec--CCccEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPL-TV--PELALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v-~~--pela~Lrf 533 (586)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~~------~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPLL------D-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCCC------C-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 4699999999999742 3 4568999999998766666788999999999999999999987 32 23468999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
.|||+|..+++++||++.+||+.+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999999765
No 44
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.63 E-value=1e-15 Score=137.12 Aligned_cols=98 Identities=19% Similarity=0.282 Sum_probs=81.7
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
...|+|+|+.|++|+. + +.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~-------~--g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV-------D--AGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC-------C--CCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 3579999999999852 1 33799999999642 22457799999999999999999999877665 57999
Q ss_pred EEEEccCCCCCCccEEEEEECCCC--CCcceE
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSEL--KPGIRA 563 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L--~~GyR~ 563 (586)
+|||+|..+++++||++.+|++.+ ..|.+|
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~ 114 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQ 114 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccc
Confidence 999999999999999999999975 667665
No 45
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.63 E-value=5.4e-15 Score=133.73 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=92.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCC-CCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKED-NWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~n-n~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
++|.|+|++|++++. .+ .+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997642 23 46789999999954 5679999877 58999999999998653 45799999
Q ss_pred EEccCCCCCCccEEEEEECC-CCCCcc---eEEEccCCCCCcCCCeEEEEEEEE
Q 007887 536 HEYDMSEKDDFAGQTCLPVS-ELKPGI---RAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~-~L~~Gy---R~ipL~d~~g~~~~~atL~v~~~f 585 (586)
||+|..++|++||.+.+||. .+.+|. .|.+|...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999888999999999995 677774 68899888877654 466666543
No 46
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.61 E-value=4.4e-15 Score=135.11 Aligned_cols=107 Identities=19% Similarity=0.315 Sum_probs=85.8
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
.+.|.|+|++|++|+... ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 14 ~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 356999999999996421 12356899999999754433457799999999999999999999876544 47999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCc---ceEEEcc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPG---IRAVPLS 567 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~ 567 (586)
.|||+|..+++++||++.+++.++... -+|+||.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 999999888899999999999998543 4677773
No 47
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.61 E-value=1.3e-14 Score=130.05 Aligned_cols=117 Identities=24% Similarity=0.429 Sum_probs=97.3
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|.|+|++|++|+.. +..+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAAA------DIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCCC------CCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 589999999999642 3345689999999864 357999999999999999999987532 3679999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCcc-eEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPGI-RAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~Gy-R~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
++..+++++||++.+++..+..|. +|.+|.+..+..-..++|.+.++|+
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998775 5779988776666678999999885
No 48
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.61 E-value=1.9e-15 Score=139.58 Aligned_cols=111 Identities=19% Similarity=0.185 Sum_probs=90.2
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|.|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|+
T Consensus 15 ~~L~V~Vi~A~nL~~~------~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~~ 88 (136)
T cd08406 15 ERLTVVVVKARNLVWD------NGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRVT 88 (136)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEEE
Confidence 4699999999999742 33466899999999865555557799999999999999999999865544 679999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcceEE-EccCCCCCc
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIRAV-PLSDRKGEM 573 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR~i-pL~d~~g~~ 573 (586)
|+|+|..+++++||++.++..+..+|++|. .+++.-+++
T Consensus 89 V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~ 128 (136)
T cd08406 89 VAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKP 128 (136)
T ss_pred EEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCe
Confidence 999998888999999999998888888764 344444444
No 49
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=8.1e-15 Score=137.58 Aligned_cols=116 Identities=21% Similarity=0.356 Sum_probs=94.9
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCC-CCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKED-NWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~n-n~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.+ +.||+|||+|+|.+..+....|.|.|+|
T Consensus 2 L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~d 70 (150)
T cd04019 2 LRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVED 70 (150)
T ss_pred EEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEEE
Confidence 8999999999964 24446789999999965 5778999877 5999999999999876656789999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc-------ceEEEccCCCC-----Cc-CCCeEEEEEEEE
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG-------IRAVPLSDRKG-----EM-LNSVRLLMRFDF 585 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G-------yR~ipL~d~~g-----~~-~~~atL~v~~~f 585 (586)
++..+++++||++.+||+.+..| -+|.||.+..| ++ ...+.|.|++.|
T Consensus 71 ~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 71 RVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred ecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 98777899999999999998654 57899998765 22 345678888776
No 50
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.60 E-value=9.3e-15 Score=133.09 Aligned_cols=113 Identities=21% Similarity=0.329 Sum_probs=89.2
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|++|++++.. ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|.|||+
T Consensus 2 L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEEC
Confidence 89999999994211 1134457789999999743 5779999999999999999999987654 4799999999
Q ss_pred cCC------CCCCccEEEEEECCCCCCcce---EEEccCCCCCcC-CCeEEE
Q 007887 539 DMS------EKDDFAGQTCLPVSELKPGIR---AVPLSDRKGEML-NSVRLL 580 (586)
Q Consensus 539 d~~------~~ddflGq~~ipL~~L~~GyR---~ipL~d~~g~~~-~~atL~ 580 (586)
+.. .++++||++.+||..+..|.+ ++||.+..++.. ..+.|-
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 876 279999999999999998854 789987665543 344553
No 51
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.60 E-value=8.3e-15 Score=133.26 Aligned_cols=117 Identities=19% Similarity=0.308 Sum_probs=91.4
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC---ccEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE---LALLRIE 534 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~Lrf~ 534 (586)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~~------d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMPK------DGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 389999999999642 3345689999999865 5679999999999999999999987543 2579999
Q ss_pred EEEccCCC-CCCccEEEEEECCCCC-Cc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 535 VHEYDMSE-KDDFAGQTCLPVSELK-PG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 535 V~D~d~~~-~ddflGq~~ipL~~L~-~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|||.+... +++|||++.++++.+. .| ..|.+|..........+.|.+++.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99988765 7899999999999986 45 4678887543222244678887765
No 52
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.60 E-value=1.5e-14 Score=136.94 Aligned_cols=125 Identities=21% Similarity=0.347 Sum_probs=100.2
Q ss_pred ceEEEEEEEecccCCCCCccc------------------------ccccCCCCCceEEEEEecCCCCcceecccccCCCC
Q 007887 456 KKTLKIKVYMGDGWHLDFKQT------------------------HFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNW 511 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~------------------------~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~ 511 (586)
.++|.|+|+.|++|+.....+ .....+.+||||+|.+.+ ....||++++++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~----~~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAG----ARVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECC----eEeeEEEEeCCCC
Confidence 467999999999997532100 001345579999999965 2346999999999
Q ss_pred CCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcc---eEEEccCCCCCcCC-CeEEEEEEEEC
Q 007887 512 TPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSDRKGEMLN-SVRLLMRFDFV 586 (586)
Q Consensus 512 NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g~~~~-~atL~v~~~f~ 586 (586)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++.. ++.|.|+++|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999987644 467999999999765 689999999999998875 68999999999875 57999999985
No 53
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.59 E-value=9.2e-15 Score=132.89 Aligned_cols=104 Identities=19% Similarity=0.268 Sum_probs=84.4
Q ss_pred eEEEEEEEecccCCCCCcccccccC-CCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLY-SPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~-s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
..|.|+|+.|++|+.. +.. +.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 4699999999999752 222 45799999999765555567899999999999999999999865444 47999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcc---eEEEc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPL 566 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL 566 (586)
.|||+|..+++++||++.+||..+..+- .|.+|
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L 124 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWSNTQPTWYPL 124 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccCCCCcceEEC
Confidence 9999998888999999999999986542 35554
No 54
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.58 E-value=1.3e-14 Score=135.86 Aligned_cols=108 Identities=24% Similarity=0.315 Sum_probs=88.0
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc-----------C
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV-----------P 526 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~-----------p 526 (586)
+|.|+|+.|++|+. ..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 38999999999963 1245799999999876555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEEccCCCCCCccEEEEEECCCCCCc----ceEEEccCCCCCc
Q 007887 527 --E--LALLRIEVHEYDMSEKDDFAGQTCLPVSELKPG----IRAVPLSDRKGEM 573 (586)
Q Consensus 527 --e--la~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~G----yR~ipL~d~~g~~ 573 (586)
+ ...|.|.|||++..++++|||++.||+..+..+ -.|.+|.......
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 357999999999877899999999999999876 3578887655544
No 55
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.58 E-value=1.8e-14 Score=134.31 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=86.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999999641 12235679999999986544445889999999999999999999997 45678999999
Q ss_pred -EccCCCCCCccEEEEEECCCCCCcc---eEEEccCC
Q 007887 537 -EYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSDR 569 (586)
Q Consensus 537 -D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~ 569 (586)
|++...++++||++.|+|+.+..+. .|.+|.+.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~ 139 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPT 139 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCc
Confidence 5777778999999999999996553 56788754
No 56
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.58 E-value=7.5e-15 Score=134.64 Aligned_cols=104 Identities=16% Similarity=0.256 Sum_probs=84.2
Q ss_pred cceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCC-CCccCcEEEEEEEcCCcc-EEE
Q 007887 455 VKKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNW-TPVWEQEFTFPLTVPELA-LLR 532 (586)
Q Consensus 455 ~~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~-NPvWNE~f~F~v~~pela-~Lr 532 (586)
...+|+|+|+.|++|+.. .....+||||+|.+.+.+.+..|+||++++++. ||+|||+|.|+|..++.. .|.
T Consensus 12 ~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l~ 85 (135)
T cd08692 12 VNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQFL 85 (135)
T ss_pred cCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEEE
Confidence 446799999999999742 122446999999999888888899999999995 799999999999866543 577
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCC-CcceEE
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELK-PGIRAV 564 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~-~GyR~i 564 (586)
+.|+|+|..+++++||++.++.++.. .|.+|.
T Consensus 86 v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW 118 (135)
T cd08692 86 IKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQW 118 (135)
T ss_pred EEEEeCCCCcCCceEEEEEECCccCCchhhhhH
Confidence 88899887788999999999998743 345554
No 57
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.58 E-value=1.3e-14 Score=132.60 Aligned_cols=97 Identities=18% Similarity=0.244 Sum_probs=81.5
Q ss_pred eEEEEEEEecccCCCCCccccccc-CCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDL-YSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~-~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
..|.|+|++|++|+.. +. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 5699999999999642 22 256799999999865555568899999999999999999999866544 58999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~ 559 (586)
.|||.+..+++++||++.|||+.+.-
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCccc
Confidence 99999988889999999999998854
No 58
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.58 E-value=1.9e-14 Score=131.57 Aligned_cols=122 Identities=23% Similarity=0.357 Sum_probs=94.8
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCC-C-CcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVP-A-DQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p-~-D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999964 2334678999999998641 1 22356899999999999999999998543 46789999
Q ss_pred EEccCCCCCCccEEEEEECCCCCCc---------ceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKPG---------IRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~G---------yR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
||++..+++++||++.++++++..+ -++.||....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 9999888899999999999988643 25678875433333456899999884
No 59
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.58 E-value=2.4e-14 Score=129.52 Aligned_cols=110 Identities=27% Similarity=0.408 Sum_probs=91.9
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 88999999999641 469999999854 477999999999999999999998766667899999999
Q ss_pred cCCCCCCccEEEEEECCCCCC--------cceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKP--------GIRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~--------GyR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|.. ++++||++.++++.+.. .-+|.+|.+..+.... +.|.+.+.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~~~-G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGRVG-GELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCccc-eEEEEEEEe
Confidence 866 68999999999999854 2489999887764443 588888877
No 60
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.57 E-value=1.3e-14 Score=128.76 Aligned_cols=97 Identities=13% Similarity=0.100 Sum_probs=79.2
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc-cEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL-ALLRIEVH 536 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel-a~Lrf~V~ 536 (586)
.|.|+|++|++|+.... .......+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 58999999999975211 011123479999999842 46799999999999999999999876554 47999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCcc
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998876
No 61
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.56 E-value=1.3e-14 Score=129.00 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=84.9
Q ss_pred EEEEEEEecccCCCCCcccccccC-CCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC---ccEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLY-SPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE---LALLRI 533 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~-s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~Lrf 533 (586)
.|+|+|++|++|+.. +.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 689999999999642 333 568999999986532 34679999999999999999999887653 368999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcceEEEcc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGIRAVPLS 567 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~GyR~ipL~ 567 (586)
.|||+|..+++++||++.+++..|.+--+|.||+
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998666777775
No 62
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.55 E-value=1.1e-14 Score=134.60 Aligned_cols=114 Identities=21% Similarity=0.218 Sum_probs=88.4
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
...|+|+|+.|++|+... .+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~d----~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSDQ----LKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCccc----cCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 356999999999996531 111223799999999865444457899999999999999999999876555 67999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcceEE-EccCCCCCc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGIRAV-PLSDRKGEM 573 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~GyR~i-pL~d~~g~~ 573 (586)
+|+|+|..+++++||++.+++.+..++.+|. .+++.-+++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~ 130 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQ 130 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCc
Confidence 9999999999999999999998866666554 444444444
No 63
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.54 E-value=5.5e-14 Score=127.00 Aligned_cols=105 Identities=21% Similarity=0.312 Sum_probs=83.2
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc-C--CccEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV-P--ELALLR 532 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~-p--ela~Lr 532 (586)
...|.|+|++|++|+.. +..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|+
T Consensus 15 ~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPPR------DDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 35699999999999642 33466899999999765555567899999999999999999998643 2 236899
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCC--CcceEEEc
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELK--PGIRAVPL 566 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~--~GyR~ipL 566 (586)
|.|||++..+++++||++.++|+... .+-.|.||
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 22345555
No 64
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.54 E-value=8.9e-14 Score=124.17 Aligned_cols=110 Identities=25% Similarity=0.331 Sum_probs=89.5
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++|+.. +..+.+||||+|.+.+ .+.||++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 2345689999999854 568999999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCcc---eEEEccCCCCCcCCCeEEEEEEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKPGI---RAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g~~~~~atL~v~~~f 585 (586)
+..+++++||++.++++.+..+- .|++|.+.. +.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~------G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDGE------GSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCCC------cEEEEEEEe
Confidence 98888999999999999987653 356776542 456666654
No 65
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.54 E-value=1e-13 Score=126.14 Aligned_cols=115 Identities=22% Similarity=0.364 Sum_probs=91.0
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 3599999999999641 2469999999954 234678874 5799999999999876666667889999
Q ss_pred EccCCCCCCccEEEEEECCCCCCcc---eEEEccCCCC-CcCCCeEEEEEEEE
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSDRKG-EMLNSVRLLMRFDF 585 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g-~~~~~atL~v~~~f 585 (586)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~ 122 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARY 122 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEE
Confidence 9988888999999999999998886 4788876543 12234678888876
No 66
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.54 E-value=6.5e-14 Score=129.32 Aligned_cols=92 Identities=26% Similarity=0.407 Sum_probs=80.1
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||++++++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 679999999999964 23456789999999843 5689999999999999999999998776788999999
Q ss_pred EccCCCCCCccEEEEEECCCCCC
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~ 559 (586)
|+|..+++++||++.+++..+..
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~ 106 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILK 106 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhcc
Confidence 99988889999999999999864
No 67
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.54 E-value=4.7e-14 Score=126.34 Aligned_cols=113 Identities=25% Similarity=0.357 Sum_probs=90.1
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCC-CCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKED-NWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~n-n~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|.||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 68999999999964 23456789999999865 4678988765 689999999999998766678999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|++..+ +++||++.+++..+..| -.+.+|.+ .|+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 998765 89999999999987554 45778864 343 23578887765
No 68
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.53 E-value=1.6e-14 Score=133.05 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=90.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|.
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~~ 88 (136)
T cd08404 15 NRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEFL 88 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEEE
Confidence 569999999999964 234567899999999754333456799999999999999999999865443 468999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcceEE-EccCCCCCcC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIRAV-PLSDRKGEML 574 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR~i-pL~d~~g~~~ 574 (586)
|||+|..+++++||++.+++.+...|.++. .|.+..|+++
T Consensus 89 v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 89 VLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 999998888999999999999976677655 5666667765
No 69
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.53 E-value=6.5e-14 Score=123.21 Aligned_cols=96 Identities=30% Similarity=0.430 Sum_probs=81.5
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|++|++|+.. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 78999999999742 2345689999999975 578899999999999999999999888888999999998
Q ss_pred cCCCCCCccEEEEEECCCCCCc-----ceEEEccC
Q 007887 539 DMSEKDDFAGQTCLPVSELKPG-----IRAVPLSD 568 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~G-----yR~ipL~d 568 (586)
+. +++||++.++|..+..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 36778864
No 70
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.53 E-value=4.9e-14 Score=128.06 Aligned_cols=96 Identities=18% Similarity=0.325 Sum_probs=80.1
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCC-cceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPAD-QIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D-~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
..|.|+|+.|++|+.. +..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~~ 87 (124)
T cd08680 14 SSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQV 87 (124)
T ss_pred CEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEEE
Confidence 4699999999999642 22356799999999754432 357899999999999999999999876655 58999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
+||+.+..+++++||++.++++.+.
T Consensus 88 ~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 88 DVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEeCCCCCceeEEEEEEEEhhhcc
Confidence 9999998888999999999999884
No 71
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.52 E-value=1e-13 Score=125.97 Aligned_cols=116 Identities=22% Similarity=0.384 Sum_probs=91.8
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|++|++|+. ..+.+||||++.+.+ ...++||++++++.||+|||+|.|.+. ++...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~-~~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELS-PNSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeC-CCCCEEEEEEEEC
Confidence 5799999999963 235689999999852 134679999999999999999999985 3356799999999
Q ss_pred cCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCC-cCCCeEEEEEEEEC
Q 007887 539 DMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGE-MLNSVRLLMRFDFV 586 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~-~~~~atL~v~~~f~ 586 (586)
+..+++++||++.++++.+..+ -.++||....++ .-..++|.+.+.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 9888899999999999998754 346788755442 22356899998874
No 72
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.52 E-value=8.3e-14 Score=125.93 Aligned_cols=97 Identities=24% Similarity=0.351 Sum_probs=80.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|.|+|++|++|+.. +..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|.
T Consensus 16 ~~L~V~v~~a~~L~~~------d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~ 87 (124)
T cd08385 16 NQLTVGIIQAADLPAM------DMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVFS 87 (124)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEEE
Confidence 5699999999999642 3345679999999964 33457799999999999999999999875544 479999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcc
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
|||+|..+++++||++.++++.+..|.
T Consensus 88 V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 88 VYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEeCCCCCCCceeEEEEEecCcccCCC
Confidence 999998888999999999999986653
No 73
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.51 E-value=1.4e-13 Score=124.43 Aligned_cols=115 Identities=21% Similarity=0.267 Sum_probs=89.1
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 1 ~L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 38999999999964 23345679999999854 45789999999999999999999877666789999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCCc----CCCeEEEEEE
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEM----LNSVRLLMRF 583 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~----~~~atL~v~~ 583 (586)
++..+++++||++.+++..+..+ -.|..|.....+. -..++|.+.|
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 99888899999999999998654 3566776532221 1234666655
No 74
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.51 E-value=3.2e-14 Score=132.81 Aligned_cols=92 Identities=26% Similarity=0.459 Sum_probs=80.5
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|+|+|++|.+|.. .|..+.+||||.+++.+ ++.||+++.+|.||+|||.|+|.+..| ...|.+.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 569999999999853 34446789999999875 688999999999999999999999877 567999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCc
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|+|.++++||+|.|+|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
No 75
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.51 E-value=1.9e-13 Score=124.32 Aligned_cols=109 Identities=24% Similarity=0.381 Sum_probs=90.8
Q ss_pred EEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEccC
Q 007887 463 VYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYDM 540 (586)
Q Consensus 463 Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d~ 540 (586)
|++|++|+. ..+..||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888853 235689999999865 467999999999999999999998654 45789999999998
Q ss_pred CCCCCccEEEEEECCCCCCcc---eEEEccCCCCCcCCCeEEEEEEEE
Q 007887 541 SEKDDFAGQTCLPVSELKPGI---RAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 541 ~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g~~~~~atL~v~~~f 585 (586)
.+++++||++.++++.+..+. .++||.+..+.++. +.|.+.+.|
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~ 115 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSY 115 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEE
Confidence 888999999999999988664 47899998888765 588888776
No 76
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.51 E-value=3e-14 Score=131.13 Aligned_cols=112 Identities=19% Similarity=0.273 Sum_probs=89.4
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+..+++ ..|+|.
T Consensus 15 ~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~ 88 (136)
T cd08402 15 GKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIVT 88 (136)
T ss_pred CeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEEE
Confidence 569999999999964 233466899999999754444456789999999999999999999865554 479999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcceE-EEccCCCCCcC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIRA-VPLSDRKGEML 574 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR~-ipL~d~~g~~~ 574 (586)
|||++..+++++||++.+++.+...++.| .+|....++++
T Consensus 89 v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 89 VLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 99999888899999999999998777654 46665555544
No 77
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.51 E-value=1.7e-13 Score=122.00 Aligned_cols=111 Identities=26% Similarity=0.463 Sum_probs=89.8
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++++.. +..+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+.......|.|.|||.
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57899999999642 2345679999999865 2457899999999999999999998765567899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCCcCCCeEEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEMLNSVRLLM 581 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~~~~atL~v 581 (586)
+..+++++||++.+++..+..| .++++|....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998655543 345653
No 78
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.50 E-value=7.6e-14 Score=125.91 Aligned_cols=97 Identities=15% Similarity=0.251 Sum_probs=79.8
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc-cEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL-ALLRIEV 535 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel-a~Lrf~V 535 (586)
..|.|+|+.|++|+.. + .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~~------~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRST------N-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCCC------C-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 4699999999999642 3 356899999999876555567799999999999999999999865443 4688999
Q ss_pred EEccCCC-CCCccEEEEEECCCCCCc
Q 007887 536 HEYDMSE-KDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 536 ~D~d~~~-~ddflGq~~ipL~~L~~G 560 (586)
||.+... ++++||.+.||+..+..|
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccC
Confidence 9988654 468999999999998655
No 79
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.50 E-value=6.9e-14 Score=124.13 Aligned_cols=100 Identities=23% Similarity=0.299 Sum_probs=82.9
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCcc-CcEEEEEEEcCCc--cEEEEEE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVW-EQEFTFPLTVPEL--ALLRIEV 535 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvW-NE~f~F~v~~pel--a~Lrf~V 535 (586)
|+|+|++|++|+... ...+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|.|
T Consensus 1 l~V~v~~a~~L~~~d-----~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~V 70 (110)
T cd08688 1 LKVRVVAARDLPVMD-----RSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIRV 70 (110)
T ss_pred CEEEEEEEECCCccc-----cCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEEE
Confidence 579999999996421 0135579999999854 6789999999999999 9999999876654 5899999
Q ss_pred EEccCCCCCCccEEEEEECCCCCC---cc---eEEEccC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKP---GI---RAVPLSD 568 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~---Gy---R~ipL~d 568 (586)
||++..+++++||++.+++..+.. +. +|.+|+|
T Consensus 71 ~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 71 MDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 999988889999999999999865 33 5788876
No 80
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.50 E-value=1.5e-13 Score=124.62 Aligned_cols=98 Identities=24% Similarity=0.367 Sum_probs=81.2
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|.
T Consensus 16 ~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i~ 89 (127)
T cd04030 16 QKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDVA 89 (127)
T ss_pred CEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEEE
Confidence 5699999999999642 33467899999999765544567899999999999999999999865443 579999
Q ss_pred EEEccCC--CCCCccEEEEEECCCCCCc
Q 007887 535 VHEYDMS--EKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 535 V~D~d~~--~~ddflGq~~ipL~~L~~G 560 (586)
|||.+.. +++++||++.++|..|..+
T Consensus 90 v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 90 VKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEECCcccCCCCceEEEEEEeccccccc
Confidence 9998864 5789999999999998654
No 81
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.50 E-value=1.5e-13 Score=124.34 Aligned_cols=96 Identities=24% Similarity=0.441 Sum_probs=80.0
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
+.|.|+|++|++|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i~ 87 (124)
T cd08387 16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEVL 87 (124)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 2334568999999985 333456899999999999999999999865543 479999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCc
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|||++..+++++||++.++++.+..|
T Consensus 88 V~d~~~~~~~~~iG~~~i~l~~~~~~ 113 (124)
T cd08387 88 LYDFDQFSRDECIGVVELPLAEVDLS 113 (124)
T ss_pred EEECCCCCCCceeEEEEEecccccCC
Confidence 99999888899999999999999755
No 82
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.50 E-value=1.8e-13 Score=124.85 Aligned_cols=93 Identities=27% Similarity=0.318 Sum_probs=78.3
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEE-EcCCccEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPL-TVPELALLRIE 534 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v-~~pela~Lrf~ 534 (586)
..+|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 3689999999999953 2346689999999865 378999999999999999999974 33456789999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCc
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|||+|..+++++||++.++|.....+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999876554
No 83
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.50 E-value=1.1e-13 Score=130.02 Aligned_cols=95 Identities=23% Similarity=0.422 Sum_probs=77.2
Q ss_pred EEEEEEecccCCCCCccc--------ccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc-c
Q 007887 459 LKIKVYMGDGWHLDFKQT--------HFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL-A 529 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~--------~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel-a 529 (586)
|.|+|++|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|+. .
T Consensus 2 ~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~~ 76 (151)
T cd04018 2 FIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLCE 76 (151)
T ss_pred eEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcCC
Confidence 789999999998532110 001224579999999876 45689999999999999999999877765 4
Q ss_pred EEEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 530 LLRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 530 ~Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
.|.|.|||+|..+++++||++.+++..+.
T Consensus 77 ~l~~~v~D~d~~~~dd~iG~~~l~l~~l~ 105 (151)
T cd04018 77 RIKIQIRDWDRVGNDDVIGTHFIDLSKIS 105 (151)
T ss_pred EEEEEEEECCCCCCCCEEEEEEEeHHHhc
Confidence 89999999998888999999999999874
No 84
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.50 E-value=2.1e-13 Score=123.52 Aligned_cols=113 Identities=19% Similarity=0.376 Sum_probs=89.6
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 7899999999964 23456789999999864 356799999999999999999999853 56899999999
Q ss_pred cCCCC--CCccEEEEEECCCCCC----cceEEEccCCCCCc--CCCeEEEEEE
Q 007887 539 DMSEK--DDFAGQTCLPVSELKP----GIRAVPLSDRKGEM--LNSVRLLMRF 583 (586)
Q Consensus 539 d~~~~--ddflGq~~ipL~~L~~----GyR~ipL~d~~g~~--~~~atL~v~~ 583 (586)
+..++ +++||++.++++.+.. +..|+||.+..... ...++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87654 5799999999999742 36799997765432 2245777765
No 85
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.49 E-value=6.1e-14 Score=128.43 Aligned_cols=113 Identities=16% Similarity=0.253 Sum_probs=87.8
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 3579999999999964 233456899999999764444456799999999999999999999876554 47999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcc-eEEEccCCCCCcC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGI-RAVPLSDRKGEML 574 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~Gy-R~ipL~d~~g~~~ 574 (586)
.|||.|..+++++||++.+++.+..+.. .|..++..-++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 9999998888999999999998754333 2345555455544
No 86
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.49 E-value=2.3e-13 Score=122.55 Aligned_cols=99 Identities=18% Similarity=0.295 Sum_probs=80.7
Q ss_pred ceEEEEEEEecccCCCCCcccccc-cCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFD-LYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLR 532 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d-~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lr 532 (586)
...|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35699999999999642 2 2356899999998654333356899999999999999999999865543 5799
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCCc
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|.|||.+..+++++||++.++|..+..|
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEeccccccc
Confidence 9999999888899999999999999654
No 87
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.49 E-value=4.6e-13 Score=120.04 Aligned_cols=117 Identities=23% Similarity=0.296 Sum_probs=89.6
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|+|+|++|++|+...........+.+||||+|.+.+ ...+|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999996421000000124679999999864 57899999999999999999999876556789999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
++.. ++++||.+.+++..+..+ -.|++|.+. ..+.|.+.++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 789999999999988654 267888764 23467777765
No 88
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.48 E-value=1.9e-13 Score=121.42 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=81.9
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC----ccEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE----LALLR 532 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe----la~Lr 532 (586)
..|+|+|+.|++|+ .+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+. -+.|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 56999999999985 13579999999975 4678999999999999999999986543 25799
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCCcc------eEEEccCC
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKPGI------RAVPLSDR 569 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~Gy------R~ipL~d~ 569 (586)
|.|||.+..+++++||++.++|+.+..+. +|+||.|+
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999998888999999999999996652 46787663
No 89
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.48 E-value=4.6e-13 Score=121.33 Aligned_cols=117 Identities=18% Similarity=0.302 Sum_probs=93.0
Q ss_pred EEEEEEEecccCCCCCccccccc--CCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDL--YSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~--~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
.|+|+|++|++|+.. +. .+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 589999999999642 22 45689999998743 568999999999999999999999765567899999
Q ss_pred EEccCCCCCCccEEEEEECCCCC----Cc--ceEEEccCCCCC--cCCCeEEEEEEEE
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELK----PG--IRAVPLSDRKGE--MLNSVRLLMRFDF 585 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~----~G--yR~ipL~d~~g~--~~~~atL~v~~~f 585 (586)
||++..+++++||++.+++..+. .| -.|++|.+.... ....++|.+++.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998778999999999999885 23 357888766322 2234688888764
No 90
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.48 E-value=7.1e-14 Score=128.78 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=85.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 234467899999998542222345789999999999999999999865555 369999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCc--ceEEEccCCCCCcC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPG--IRAVPLSDRKGEML 574 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~G--yR~ipL~d~~g~~~ 574 (586)
|||+|..+++++||++.+...+.... -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555442 23446666666654
No 91
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.48 E-value=7.6e-14 Score=128.12 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=89.1
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
.+.|+|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 234567899999998654333456789999999999999999998754433 46899
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcceE-EEccCCCCCcC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGIRA-VPLSDRKGEML 574 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~GyR~-ipL~d~~g~~~ 574 (586)
.|||++..+++++||++.+++.....|++| ..+....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 999999888899999999999877777764 35655556654
No 92
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.48 E-value=5.1e-14 Score=118.78 Aligned_cols=77 Identities=32% Similarity=0.521 Sum_probs=66.4
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcCCCCCCCCC
Q 007887 24 DVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFSSDLNPPIN 103 (586)
Q Consensus 24 el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S~~~n~~~~ 103 (586)
||..||.+|++++..||+++|++||+++|++..++.++|.+||++|++... ...+..||++||++||+| +.|.+++
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~---~~~~~~lt~~gF~~fL~S-~~N~~~~ 76 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDER---NRQKGQLTLEGFTRFLFS-DENSIFD 76 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHH---HHCTTEEEHHHHHHHHHS-TTCBSS-
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchh---hcccCCcCHHHHHHHHCC-CcCCCCC
Confidence 799999999998899999999999999999988899999999999985421 224578999999999998 4699998
Q ss_pred C
Q 007887 104 Y 104 (586)
Q Consensus 104 ~ 104 (586)
|
T Consensus 77 ~ 77 (83)
T PF09279_consen 77 P 77 (83)
T ss_dssp H
T ss_pred h
Confidence 7
No 93
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.47 E-value=1.9e-13 Score=124.86 Aligned_cols=95 Identities=22% Similarity=0.329 Sum_probs=76.7
Q ss_pred eEEEEEEEecccCCCCCccccccc-CCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEE-EEEcCCc--cEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDL-YSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTF-PLTVPEL--ALLR 532 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~-~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F-~v~~pel--a~Lr 532 (586)
..|+|+|++|++|+.. +. .+.+||||+|.+.+ .+..++||++++++.||+|||+|.| .+...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 5799999999999752 22 25679999999863 3345679999999999999999999 4443222 4699
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCC
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~ 559 (586)
|.|||+|..+++++||++.+||+.+..
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccCC
Confidence 999999988889999999999999853
No 94
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.47 E-value=2.9e-13 Score=124.27 Aligned_cols=96 Identities=25% Similarity=0.427 Sum_probs=79.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC--CcceecccccCCCCCCccCcEEEEEEEcC----CccE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA--DQIMKKTKPKEDNWTPVWEQEFTFPLTVP----ELAL 530 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~--D~~k~kTkvi~nn~NPvWNE~f~F~v~~p----ela~ 530 (586)
..|+|+|++|++|+.. +..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 4699999999999642 3345689999999975432 24578999999999999999999998642 2468
Q ss_pred EEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 531 LRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 531 Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
No 95
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.46 E-value=8.6e-13 Score=119.52 Aligned_cols=102 Identities=19% Similarity=0.309 Sum_probs=81.6
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|+|+|++|++|+.. +..+.+||||+|.+.+. .....||++++++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~~------~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKAD------SSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCCC------CCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 589999999999642 33467899999986532 1345799999999999999999999877656789999999
Q ss_pred ccCCCCCCccEEEEEECCCCCC---cc---eEEEcc
Q 007887 538 YDMSEKDDFAGQTCLPVSELKP---GI---RAVPLS 567 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~---Gy---R~ipL~ 567 (586)
.+..+++++||++.++|..+.. |. +|++|.
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~ 109 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLD 109 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcC
Confidence 9988789999999999987532 32 567775
No 96
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.46 E-value=1.2e-13 Score=127.04 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=87.3
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
++|.|+|++|++|+. .+..+..||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 15 ~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~~ 88 (136)
T cd08405 15 NRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLIIT 88 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 234467899999998643333346799999999999999999999764433 579999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcce-EEEccCCCCCcC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIR-AVPLSDRKGEML 574 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR-~ipL~d~~g~~~ 574 (586)
|||.+..+++++||++.+++.....+.. |..|...-++++
T Consensus 89 v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 89 VMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 9999988889999999999998754443 456666656554
No 97
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.45 E-value=1e-12 Score=119.65 Aligned_cols=114 Identities=26% Similarity=0.366 Sum_probs=89.3
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|+|+|++|++|+. .+..+..||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 58999999999964 23346689999999843 467999999999999999999988654 3579999999
Q ss_pred ccCC-----------CCCCccEEEEEECCCCCCcc-eEEEccCCCCCcCCCeEEEEEE
Q 007887 538 YDMS-----------EKDDFAGQTCLPVSELKPGI-RAVPLSDRKGEMLNSVRLLMRF 583 (586)
Q Consensus 538 ~d~~-----------~~ddflGq~~ipL~~L~~Gy-R~ipL~d~~g~~~~~atL~v~~ 583 (586)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.++|
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 8842 46899999999999886554 5778876555544556777764
No 98
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.45 E-value=3e-13 Score=122.47 Aligned_cols=108 Identities=24% Similarity=0.322 Sum_probs=88.0
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCC-CCCCccCcEEEEEEEcCC----ccEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKED-NWTPVWEQEFTFPLTVPE----LALLR 532 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~n-n~NPvWNE~f~F~v~~pe----la~Lr 532 (586)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 389999999999642 3346789999999975 34678998865 699999999999987764 47899
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCCcc--------eEEEccCCCCCcCC
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKPGI--------RAVPLSDRKGEMLN 575 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~Gy--------R~ipL~d~~g~~~~ 575 (586)
|.|||.+..+++++||++.+|+..+..+. .+.+|.+..|++.+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 99999987677999999999999987654 34688888887654
No 99
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.45 E-value=9.9e-13 Score=118.94 Aligned_cols=115 Identities=19% Similarity=0.297 Sum_probs=87.7
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|+.|.+|+... +..+.+||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~~-----~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPRS-----GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCCC-----CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 789999999996421 1124679999999843 2357899999999999999999998643 46899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCc---ceEEEccC--CCCCcCCCeEEEEEEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKPG---IRAVPLSD--RKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d--~~g~~~~~atL~v~~~f 585 (586)
+..+++++||.+.++++.+..| -.|.+|.- ..++ ..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~--~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSE--VQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCc--ccEEEEEEEEC
Confidence 9888899999999999999754 35777753 2233 34677666654
No 100
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.45 E-value=8.6e-13 Score=119.18 Aligned_cols=115 Identities=18% Similarity=0.308 Sum_probs=87.4
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|+.|++|+.. +..+..||||+|.+.+ ....||++++++.||+|||.|.|.+.. ....|.|.|||+
T Consensus 2 l~v~vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~-~~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPAK------DITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPP-GFHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcCC------CCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCC-CCCEEEEEEEEC
Confidence 78999999999642 3346689999999854 234699999999999999999998753 346899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCc----ceEEEccCCCCCcCCCeEEEEEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKPG----IRAVPLSDRKGEMLNSVRLLMRFD 584 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~G----yR~ipL~d~~g~~~~~atL~v~~~ 584 (586)
+..+++++||++.+++..+..+ -.|++|....+..-..+.|.+.++
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999998877643 358898643222112346666553
No 101
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.45 E-value=1.1e-12 Score=120.84 Aligned_cols=115 Identities=21% Similarity=0.390 Sum_probs=88.4
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc-C--------Cc
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV-P--------EL 528 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~-p--------el 528 (586)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999964 23456789999999864 47789999999999999999997532 1 12
Q ss_pred cEEEEEEEEccCCCCCCccEEEEE-ECCCCCC---c---ceEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 529 ALLRIEVHEYDMSEKDDFAGQTCL-PVSELKP---G---IRAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 529 a~Lrf~V~D~d~~~~ddflGq~~i-pL~~L~~---G---yR~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
..|.|.|||+|..+++++||++.+ |+..++. + -+|.+|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 568999999998888999999986 6655542 2 37889863 343 345788888864
No 102
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.45 E-value=4.7e-13 Score=120.49 Aligned_cols=104 Identities=22% Similarity=0.221 Sum_probs=82.9
Q ss_pred EEEecccCCCCCcccccccCCCCCceEEEEEecCC--CCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEcc
Q 007887 462 KVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVP--ADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYD 539 (586)
Q Consensus 462 ~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p--~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d 539 (586)
-.++|++|+. .+..+.+||||+|.+.+.. ....+.||++++++.||+|||+|.|.+..++...|+|.|||+|
T Consensus 5 ~~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d 78 (120)
T cd04048 5 LSISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVD 78 (120)
T ss_pred EEEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEec
Confidence 3478888864 2345678999999998754 3344689999999999999999999987777788999999999
Q ss_pred C----CCCCCccEEEEEECCCCCCcc---eEEEccCCCC
Q 007887 540 M----SEKDDFAGQTCLPVSELKPGI---RAVPLSDRKG 571 (586)
Q Consensus 540 ~----~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g 571 (586)
. .+++++||++.++++.|..+- .+.+|.+..+
T Consensus 79 ~~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 79 SKSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CCcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 6 678999999999999997542 4567755443
No 103
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.44 E-value=3e-12 Score=116.45 Aligned_cols=114 Identities=19% Similarity=0.312 Sum_probs=88.7
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..|+|+|++|++|+. .+.++.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ ...|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 468999999999853 23456789999998765 467999999999999999999987654 467999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCc-ceEEEccC----CCCCcCCCeEEEEEEEE
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPG-IRAVPLSD----RKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~G-yR~ipL~d----~~g~~~~~atL~v~~~f 585 (586)
|++... +++||.+.+++..+..+ +++++|.. ..|+. .++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~--~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEV--PGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCC--CCEEEEEEEE
Confidence 998764 89999999999977544 67889853 33333 3466666543
No 104
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.44 E-value=7.3e-13 Score=119.81 Aligned_cols=97 Identities=23% Similarity=0.345 Sum_probs=78.7
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcC---CccEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVP---ELALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~p---ela~Lrf 533 (586)
..|.|+|++|++|+.. +..+..||||+|.+.+ .+..+.||++++++.||+|||+|.|.+... ....|+|
T Consensus 16 ~~L~v~v~~a~~L~~~------d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~~ 87 (125)
T cd08386 16 STLTLKILKAVELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLYL 87 (125)
T ss_pred CEEEEEEEEecCCCCc------cCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEEE
Confidence 5699999999999642 3345679999999853 334568999999999999999999975321 2357999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
.|||+|..+++++||++.++++.+..|-
T Consensus 88 ~v~d~d~~~~~~~iG~~~i~l~~l~~~~ 115 (125)
T cd08386 88 QVLDYDRFSRNDPIGEVSLPLNKVDLTE 115 (125)
T ss_pred EEEeCCCCcCCcEeeEEEEecccccCCC
Confidence 9999998888999999999999987663
No 105
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.44 E-value=7.5e-13 Score=125.86 Aligned_cols=97 Identities=22% Similarity=0.269 Sum_probs=79.7
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcC-Cc--cEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVP-EL--ALLR 532 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~p-el--a~Lr 532 (586)
.+.|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 46799999999999752 334668999999996544445678999999999999999999986432 23 4799
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCC
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
|.|||+|..+++++||++.+++..+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
No 106
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.43 E-value=7.9e-13 Score=119.14 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=82.3
Q ss_pred eEEEEEEEecccCCCCCcccccc-cCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFD-LYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d-~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
..|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~i 85 (123)
T cd08390 14 EQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLRL 85 (123)
T ss_pred CEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEEE
Confidence 5699999999999642 2 245679999999853 33456789999999999999999999876544 47999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcc---eEEEc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPL 566 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL 566 (586)
.|||.+..+++++||++.++|+.+..+. .|+||
T Consensus 86 ~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 86 SVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 9999998778999999999999987654 45565
No 107
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.43 E-value=7.9e-13 Score=120.07 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=80.2
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEE-EEcCC--ccEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFP-LTVPE--LALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~-v~~pe--la~Lrf 533 (586)
..|.|+|++|++|+.. +..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCch------hcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 5699999999999642 2335579999987754 3346789999888 999999999998 54333 367999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCcc---eEEEc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPL 566 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL 566 (586)
.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997663 35555
No 108
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.43 E-value=5.2e-13 Score=123.37 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=78.7
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|.|+|++|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 15 ~~L~V~V~~a~nL~~~------~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~~ 87 (137)
T cd08409 15 NRLTVVVLRARGLRQL------D-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSLS 87 (137)
T ss_pred CeEEEEEEEecCCCcc------c-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEEE
Confidence 5699999999999642 3 456899999999864333346799999999999999999999865444 689999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCc
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|++.+..+++++||++.++......|
T Consensus 88 V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 88 VMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEeCCCCCCcceEEEEEECCcccCCC
Confidence 99999888899999999997655444
No 109
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.43 E-value=1.9e-12 Score=118.47 Aligned_cols=116 Identities=22% Similarity=0.239 Sum_probs=87.7
Q ss_pred eEEEEEEEecccCCCCCcccc--c--ccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTH--F--DLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLR 532 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~--~--d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lr 532 (586)
+.|+|+|+.|++|+....... + ...+..||||+|.+.+ ....+|++++++.||+|||+|+|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 569999999999964211000 0 0124579999999864 23468999999999999999999985 457899
Q ss_pred EEEEEccCCCCCCccEEEEEECCCCCC-----cceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 533 IEVHEYDMSEKDDFAGQTCLPVSELKP-----GIRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 533 f~V~D~d~~~~ddflGq~~ipL~~L~~-----GyR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|.|+|++..+.++++|++.++|+.+.. +-.|++|. + .+.|.|++.+
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-~------~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-P------QGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-C------CcEEEEEEEE
Confidence 999999877788999999999998876 25688885 2 3467777665
No 110
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.42 E-value=1e-12 Score=119.95 Aligned_cols=108 Identities=28% Similarity=0.384 Sum_probs=88.5
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC-ccEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE-LALLRIEV 535 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe-la~Lrf~V 535 (586)
..|+|+|++|++|+.. +..+..||||+|.+.+.+.+..++||++++++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 4699999999999642 2235679999999987666667889999999999999999999986543 35799999
Q ss_pred EEccCCCCCCccEEEEEECCCCCCc--ceEEEccCCC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKPG--IRAVPLSDRK 570 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~G--yR~ipL~d~~ 570 (586)
||.+..+++++||++.++++++..+ -.|.+|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9998777899999999999998643 3578887643
No 111
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.42 E-value=3.8e-12 Score=119.78 Aligned_cols=121 Identities=18% Similarity=0.187 Sum_probs=87.4
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC--------ccE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE--------LAL 530 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe--------la~ 530 (586)
..++|..+.+++++ ..+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 34555555554332 122234579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEEccCC-CCCCccEEEEEECCCCCCc--c-eEEEccCCCCCcCCCeEEEEEEEE
Q 007887 531 LRIEVHEYDMS-EKDDFAGQTCLPVSELKPG--I-RAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 531 Lrf~V~D~d~~-~~ddflGq~~ipL~~L~~G--y-R~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|.|.|||.+.. .+|++||++.++|..+..+ . .+++|++ |...-++.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 99999999864 4699999999999999544 3 4679985 555667788888763
No 112
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.42 E-value=2e-12 Score=116.43 Aligned_cols=119 Identities=19% Similarity=0.256 Sum_probs=91.5
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|.|+|++|++|+.. . ...+.+||||+|.+.+. ....||+++.++.||.|||.|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~--~---~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS--D---IIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc--c---ccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 4689999999999631 0 11245799999999752 35679999999999999999999887 44568999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCcceE--E-EccCCCCCcCCCeEEEEEEEEC
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPGIRA--V-PLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~GyR~--i-pL~d~~g~~~~~atL~v~~~f~ 586 (586)
|.+..+++++||++.+++..+..+..+ + ......|++ .++|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 998877899999999999999765332 2 233456654 35888888874
No 113
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.41 E-value=3.7e-13 Score=122.81 Aligned_cols=112 Identities=20% Similarity=0.205 Sum_probs=90.0
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC--ccEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE--LALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe--la~Lrf~ 534 (586)
..|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 5699999999999642 2345689999999986554455779999999999999999999987654 3689999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcce-EEEccCCCCCcC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGIR-AVPLSDRKGEML 574 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~GyR-~ipL~d~~g~~~ 574 (586)
|||.+..+++++||++.++++....+.. |.+|.+..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999877789999999999999444443 557877767764
No 114
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.40 E-value=9.9e-13 Score=121.77 Aligned_cols=111 Identities=17% Similarity=0.272 Sum_probs=84.8
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCC-cceecccccCCCCCCccCcEEEEEEEcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPAD-QIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D-~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf 533 (586)
.+|.|+|+.|.+|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~~ 88 (138)
T cd08408 15 GRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLMF 88 (138)
T ss_pred CeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEEE
Confidence 569999999999964 233456899999999753222 246799999999999999999999875444 58999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCc-ce-EEEccCCCCCc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPG-IR-AVPLSDRKGEM 573 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~G-yR-~ipL~d~~g~~ 573 (586)
.|||.+..+++++||++.+++.+...+ .. |-.++...+++
T Consensus 89 ~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~ 130 (138)
T cd08408 89 SVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQ 130 (138)
T ss_pred EEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCE
Confidence 999999888899999999999877543 22 33444444443
No 115
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.40 E-value=1.4e-12 Score=117.79 Aligned_cols=97 Identities=24% Similarity=0.366 Sum_probs=79.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEE-EcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPL-TVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v-~~pel--a~Lrf 533 (586)
..|+|+|++|++|+. .+..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|.. ...++ ..|.|
T Consensus 15 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~~ 88 (123)
T cd04035 15 SALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLRL 88 (123)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEEE
Confidence 569999999999964 2334568999999997655555678999999999999999999963 33333 47999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
.|||++.. ++++||++.++++.|..+
T Consensus 89 ~v~d~~~~-~~~~iG~~~i~l~~l~~~ 114 (123)
T cd04035 89 LVLDEDRF-GNDFLGETRIPLKKLKPN 114 (123)
T ss_pred EEEEcCCc-CCeeEEEEEEEcccCCCC
Confidence 99999877 789999999999999866
No 116
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.40 E-value=1.6e-12 Score=117.99 Aligned_cols=91 Identities=22% Similarity=0.379 Sum_probs=77.4
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++.+.|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 234567899999998652 2346788888999999999999998878778999999999
Q ss_pred cCCCCCCccEEEEEECCCCC
Q 007887 539 DMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~ 558 (586)
|..+++++||++.+++....
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998775
No 117
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.37 E-value=2.4e-12 Score=120.18 Aligned_cols=91 Identities=29% Similarity=0.482 Sum_probs=77.7
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|+|+|++|.+|+.. +. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~~------d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAVR------DF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCCC------CC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 4699999999999642 22 4579999999853 578999999999999999999998766 567999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCc
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
|++..+++++||++.+++..+..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999887654
No 118
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.37 E-value=2.7e-12 Score=114.95 Aligned_cols=93 Identities=23% Similarity=0.342 Sum_probs=72.6
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|.+|++|+ +.+||||++.+.+......+.||++++++.||+|||+|+|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 579999999983 23799999988654332457899999999999999999999853 45899999998
Q ss_pred -------cCCCCCCccEEEEEECC--CCC-CcceEE
Q 007887 539 -------DMSEKDDFAGQTCLPVS--ELK-PGIRAV 564 (586)
Q Consensus 539 -------d~~~~ddflGq~~ipL~--~L~-~GyR~i 564 (586)
|..++++++|.+.+.|+ .+. .|+...
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~~ 103 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQEK 103 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeEE
Confidence 45577999988888765 343 376543
No 119
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.36 E-value=8.1e-12 Score=115.47 Aligned_cols=94 Identities=22% Similarity=0.359 Sum_probs=75.2
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC--------CcceecccccCCCCCCcc-CcEEEEEEEcCCc
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA--------DQIMKKTKPKEDNWTPVW-EQEFTFPLTVPEL 528 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~--------D~~k~kTkvi~nn~NPvW-NE~f~F~v~~pel 528 (586)
.++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36899999999952 3357899999999964222 234789999999999999 99999988533
Q ss_pred cEEEEEEEEccCCCC---CCccEEEEEECCCCCCc
Q 007887 529 ALLRIEVHEYDMSEK---DDFAGQTCLPVSELKPG 560 (586)
Q Consensus 529 a~Lrf~V~D~d~~~~---ddflGq~~ipL~~L~~G 560 (586)
..|.|.|||++..++ +++||++.+|++.+..|
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~ 107 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLER 107 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhccc
Confidence 479999999865433 69999999999999755
No 120
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.35 E-value=5.6e-12 Score=116.55 Aligned_cols=104 Identities=26% Similarity=0.364 Sum_probs=84.4
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcC------------
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVP------------ 526 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~p------------ 526 (586)
|+|+|+.|++|+.. ..+..||||+|.+.+ +....++||+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999999641 235689999999875 2345678999999999999999999998754
Q ss_pred ---CccEEEEEEEEccCCCCCCccEEEEEECCCCCCc---ceEEEccCCC
Q 007887 527 ---ELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPG---IRAVPLSDRK 570 (586)
Q Consensus 527 ---ela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~G---yR~ipL~d~~ 570 (586)
....|+|.|||.+..++++|||++.+++..+..+ ..|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 4688887543
No 121
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.33 E-value=8.5e-12 Score=112.66 Aligned_cols=92 Identities=23% Similarity=0.395 Sum_probs=77.4
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|.|+|++|++++. .+..+.+||||+|.+.+ ..+.+|++++++.||+|||+|.|.+..+ ...|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~-~~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSP-NQKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCC-CCEEEEEEEE
Confidence 58999999999864 23356789999999854 2467899999999999999999988655 3689999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G 560 (586)
++..+++++||++.+++..+..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999988765
No 122
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.32 E-value=8.1e-12 Score=112.96 Aligned_cols=91 Identities=22% Similarity=0.366 Sum_probs=75.7
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCC-CCCCccCcEEEEEEEcCC---ccEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKED-NWTPVWEQEFTFPLTVPE---LALLRI 533 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~n-n~NPvWNE~f~F~v~~pe---la~Lrf 533 (586)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999963 23346789999999854 4568888875 799999999999998763 467999
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~ 559 (586)
.|||.+..+++++||++.+++..+..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999887789999999999999854
No 123
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.31 E-value=9.6e-12 Score=112.79 Aligned_cols=94 Identities=21% Similarity=0.329 Sum_probs=75.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..|.|+|+.|++++. + + ..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.+.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~--~---~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P--D---KFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C--C---CCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 369999999999952 1 1 247999999954 57789998875 999999999999765544 999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCc-----ceEEEcc
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPG-----IRAVPLS 567 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~G-----yR~ipL~ 567 (586)
|+|.. .|||+|++.|||..+..+ -.|+||.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99965 699999999999998643 2467774
No 124
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.30 E-value=1.6e-11 Score=115.57 Aligned_cols=95 Identities=28% Similarity=0.491 Sum_probs=76.4
Q ss_pred CcceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC------------------------CcceecccccCC
Q 007887 454 PVKKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA------------------------DQIMKKTKPKED 509 (586)
Q Consensus 454 p~~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~------------------------D~~k~kTkvi~n 509 (586)
|....|+|+|++|++|+. .+..+.+||||+|.+.+... ....++|+++.+
T Consensus 25 ~~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~ 98 (153)
T cd08676 25 PPIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQ 98 (153)
T ss_pred CCeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecC
Confidence 345689999999999964 24456789999998853211 012468999999
Q ss_pred CCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 510 NWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 510 n~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
+.||+|||+|.|.+..+....|.|.|||++ +++||++.++++.+.
T Consensus 99 tlnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 99 TLNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 999999999999987655678999999987 789999999999987
No 125
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.30 E-value=2.8e-11 Score=112.84 Aligned_cols=114 Identities=18% Similarity=0.388 Sum_probs=92.1
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
...|.|.|+.|++||.. .+|||+|.+.+ ....||+++.++.||.|+|.|.|....+ ...|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~~-----------~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPPK-----------KRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCCc-----------CCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 35699999999999741 26899999986 2345999999999999999999975433 56789999
Q ss_pred EEccC-CC---CCCccEEEEEECCCCCCcc---eEEEccCCCCCc--------CCCeEEEEEEEE
Q 007887 536 HEYDM-SE---KDDFAGQTCLPVSELKPGI---RAVPLSDRKGEM--------LNSVRLLMRFDF 585 (586)
Q Consensus 536 ~D~d~-~~---~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g~~--------~~~atL~v~~~f 585 (586)
+..+. .+ ++++||.+.||+..+..|. +|.||.+.+|.+ -++++|-|+++|
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf 138 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARY 138 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEE
Confidence 75442 21 4789999999999998874 799999999886 466799999887
No 126
>PLN03008 Phospholipase D delta
Probab=99.29 E-value=1.1e-11 Score=140.54 Aligned_cols=99 Identities=19% Similarity=0.427 Sum_probs=86.0
Q ss_pred CCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcc
Q 007887 482 SPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 482 s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|+|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4579999999943 33569999999999999999999988764 58999999999887 699999999999999995
Q ss_pred ---eEEEccCCCCCcCC-CeEEEEEEEEC
Q 007887 562 ---RAVPLSDRKGEMLN-SVRLLMRFDFV 586 (586)
Q Consensus 562 ---R~ipL~d~~g~~~~-~atL~v~~~f~ 586 (586)
+|++|.+..|++.. ++.|.|.++|.
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 68999999999984 57999998874
No 127
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=2.9e-12 Score=133.70 Aligned_cols=96 Identities=28% Similarity=0.479 Sum_probs=84.5
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc-cEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL-ALLRIEV 535 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel-a~Lrf~V 535 (586)
..|+|+|..|.+|.. .|.++.+||||++.+...+....|+||++++.++||+|||+|+|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 358899999999853 455677899999999998888899999999999999999999999875543 6799999
Q ss_pred EEccCCCCCCccEEEEEECCCCC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
||+|..+++||+|...+.+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999988885
No 128
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.28 E-value=5.2e-11 Score=106.13 Aligned_cols=113 Identities=20% Similarity=0.354 Sum_probs=83.0
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEEEE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIEVH 536 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~V~ 536 (586)
|+|+|+.|.+|+.. +.+||||.|.+.+ ....||+++++ .||.|||+|.|.+...++ ..|.+.|+
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 78999999999631 3579999999965 23468999988 999999999999876544 35777788
Q ss_pred EccCCCCCCccEEEEEECCCCCCcc-eEEEccCCCCCcCCCeEEEEEEEE
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPGI-RAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~Gy-R~ipL~d~~g~~~~~atL~v~~~f 585 (586)
|.+...++.++|.+.+....+..+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555667777665555544443 578998766655455688888765
No 129
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.27 E-value=3.6e-11 Score=109.26 Aligned_cols=113 Identities=22% Similarity=0.294 Sum_probs=83.9
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHE 537 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D 537 (586)
.|.|+|++|+ +.. .+..+.+||||+|.+.+. .+.||++++++.||+|||+|.|.+. +...|.|.|||
T Consensus 3 ~L~V~i~~a~-l~~------~~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~d 69 (125)
T cd04021 3 QLQITVESAK-LKS------NSKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVWS 69 (125)
T ss_pred eEEEEEEeeE-CCC------CCcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEEe
Confidence 5899999998 422 122456899999998652 3679999999999999999999874 45689999999
Q ss_pred ccCCCCCCccEEEEEECCCCCCc-------c-eEEEccCCCC-CcCCCeEEEEEE
Q 007887 538 YDMSEKDDFAGQTCLPVSELKPG-------I-RAVPLSDRKG-EMLNSVRLLMRF 583 (586)
Q Consensus 538 ~d~~~~ddflGq~~ipL~~L~~G-------y-R~ipL~d~~g-~~~~~atL~v~~ 583 (586)
++..+.+++||++.++|..+..+ + -+++|..... .-...+.|.+.+
T Consensus 70 ~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 70 HHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred CCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 99888899999999999988642 2 2567764331 112234666654
No 130
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.27 E-value=1.3e-11 Score=102.34 Aligned_cols=85 Identities=33% Similarity=0.544 Sum_probs=73.5
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|++|++|+.. +..+.+||||+|.+.+.+. .+.+|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999742 2334679999999987554 568999999999999999999999888888899999999
Q ss_pred cCCCCCCccEEEE
Q 007887 539 DMSEKDDFAGQTC 551 (586)
Q Consensus 539 d~~~~ddflGq~~ 551 (586)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
No 131
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.25 E-value=2.9e-11 Score=116.71 Aligned_cols=98 Identities=29% Similarity=0.393 Sum_probs=84.5
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc------cceeHHHHHHHHhhcccccC
Q 007887 122 TGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT------TPVELMKCLKSIKEHAFSAS 195 (586)
Q Consensus 122 SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 195 (586)
.+|+-|-...+ +.|..++..||..|||.||+|||-..| ++|||+|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888866555 889999999999999999999998776 579999999986 56889999999999999 88
Q ss_pred CCCeEEEecCCCCH----HHHHHHHHHHHHHhh
Q 007887 196 PYPVVITLEDHLTP----HLQAKVAKMLAETFG 224 (586)
Q Consensus 196 ~yPvILSlE~Hcs~----~qQ~~ma~~l~~i~G 224 (586)
.+|++|.||.+++. .++.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999974 666777777776654
No 132
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.24 E-value=4.5e-11 Score=106.28 Aligned_cols=96 Identities=18% Similarity=0.267 Sum_probs=77.6
Q ss_pred cCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCC-
Q 007887 480 LYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELK- 558 (586)
Q Consensus 480 ~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~- 558 (586)
..+.+||||+|.+.+ ....+|++++++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.++|..+.
T Consensus 9 ~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~~ 83 (111)
T cd04052 9 KTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLID 83 (111)
T ss_pred cCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHHh
Confidence 456689999999964 2457899998899999999999998766557799999999987 7999999999999873
Q ss_pred C---cceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 559 P---GIRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 559 ~---GyR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
. +.+|.+|.+ .+.+.|.+++.|
T Consensus 84 ~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 84 ATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357889865 234688888776
No 133
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.21 E-value=5.9e-11 Score=104.95 Aligned_cols=93 Identities=24% Similarity=0.378 Sum_probs=72.1
Q ss_pred EEEEecccCCCCCcccccccCCCCCceEEEEEecCC-CCcceecccccCCCCCCccCcEEEEEEE---cCC-ccEEEEEE
Q 007887 461 IKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVP-ADQIMKKTKPKEDNWTPVWEQEFTFPLT---VPE-LALLRIEV 535 (586)
Q Consensus 461 V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p-~D~~k~kTkvi~nn~NPvWNE~f~F~v~---~pe-la~Lrf~V 535 (586)
+-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|| +|.|.+. ..+ ...|+|.|
T Consensus 4 ~~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V 76 (110)
T cd04047 4 ELQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEV 76 (110)
T ss_pred EEEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEE
Confidence 34568888864 2445678999999987532 12346799999999999999 6777643 222 46899999
Q ss_pred EEccCCCCCCccEEEEEECCCCCCc
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
||++..+++++||++.++++.|..+
T Consensus 77 ~d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 77 YDYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EEeCCCCCCcEEEEEEEEHHHHhcC
Confidence 9999888899999999999999855
No 134
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.13 E-value=3.7e-10 Score=95.71 Aligned_cols=99 Identities=37% Similarity=0.556 Sum_probs=81.3
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999998542 122457999999997632 3468899999889999999999998776577899999999
Q ss_pred cCCCCCCccEEEEEECCCCCCcceEEE
Q 007887 539 DMSEKDDFAGQTCLPVSELKPGIRAVP 565 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~GyR~ip 565 (586)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876668999999999999999987654
No 135
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.11 E-value=4.4e-10 Score=122.23 Aligned_cols=104 Identities=24% Similarity=0.336 Sum_probs=86.4
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIE 534 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~ 534 (586)
..|+|+|+.|.+|+.. +..+.+||||++.+.. ....+.+|++.++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4699999999999753 2224579999999864 44678899999999999999999999776555 579999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcc---eEEEccC
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSD 568 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d 568 (586)
|||.|.++++++||++.+||..+.... .|.+|..
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~ 275 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQP 275 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeecccc
Confidence 999999999999999999999887665 3666654
No 136
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.02 E-value=1.1e-09 Score=134.95 Aligned_cols=114 Identities=16% Similarity=0.325 Sum_probs=91.4
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc-cEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL-ALLRIE 534 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel-a~Lrf~ 534 (586)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||.|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 467999999999984 1245679999999874 236789999999999999999999987754 459999
Q ss_pred EEEccCCCCCCccEEEEEECCCCCCcc---eEEEccC---CCCCcCCCeEEEEEEEE
Q 007887 535 VHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSD---RKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 535 V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d---~~g~~~~~atL~v~~~f 585 (586)
|||+|.++ ++.+|.+.|++..+-.+- -+.+|.+ +.|.+ -+|.++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999886 568999999999987553 3678875 34442 368898887
No 137
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=98.98 E-value=2.8e-09 Score=97.83 Aligned_cols=97 Identities=23% Similarity=0.269 Sum_probs=78.6
Q ss_pred EEEEEEecccCCCCCcccccccCC--CCCceEEEEEecCCCCcceecccccCCCCC--CccCcEEEEEEEc---------
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYS--PPDFYCKVGIAGVPADQIMKKTKPKEDNWT--PVWEQEFTFPLTV--------- 525 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s--~~DPyV~V~i~g~p~D~~k~kTkvi~nn~N--PvWNE~f~F~v~~--------- 525 (586)
|+|.|..+++++.... +..+ .+||||++.+.+. ...+++|.++.++.| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~~----~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDDT----NITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCccccc----ccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 7899999999764311 1122 3799999999875 356789999999888 9999999998765
Q ss_pred ------------CCc--cEEEEEEEEccCCCCCCccEEEEEECCCCCCcc
Q 007887 526 ------------PEL--ALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 526 ------------pel--a~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
.++ ..|.++|||.|..+.+++||...++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999899999999999999998775
No 138
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.95 E-value=1.5e-09 Score=117.70 Aligned_cols=115 Identities=22% Similarity=0.356 Sum_probs=85.2
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..++++|++||+|.. .|..+.+||||.+.+. +.|+||++|..++||+|||.|.|...+. -..|++.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 468999999999954 2344678999999986 4788999999999999999999998765 456999999
Q ss_pred EccCC-----------CCCCccEEEEEECCCCCCcc-eEEEccCCCCCcCCCeEEEEEE
Q 007887 537 EYDMS-----------EKDDFAGQTCLPVSELKPGI-RAVPLSDRKGEMLNSVRLLMRF 583 (586)
Q Consensus 537 D~d~~-----------~~ddflGq~~ipL~~L~~Gy-R~ipL~d~~g~~~~~atL~v~~ 583 (586)
|+|.. ..|||+||..|.+..|.... -|..|--...+..-.+.+-+||
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhi 421 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 421 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEE
Confidence 98854 35899999999999886332 2444533333333233333333
No 139
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.90 E-value=3.3e-09 Score=109.49 Aligned_cols=137 Identities=19% Similarity=0.253 Sum_probs=108.5
Q ss_pred CccccceeeeccccccccCCC--CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhh
Q 007887 112 TAPLSHYFIYTGHNSYLTGNQ--LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKE 189 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~G~Q--l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~ 189 (586)
+.||++.-|-.|||++-...- -.+++....+..-|..|+|.++|+|+..+ +++..++||..... .+|+||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 779999999999998754332 44566667788999999999999999864 24689999976555 899999999999
Q ss_pred cccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCc---CCCCCCChhhhccceeeecc
Q 007887 190 HAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCE---CLQEFPSPEELKYKIIISTK 253 (586)
Q Consensus 190 ~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (586)
+.-..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8776667889999999998864 3344666666666665422 24789999999999999865
No 140
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.88 E-value=1.2e-08 Score=85.61 Aligned_cols=90 Identities=37% Similarity=0.585 Sum_probs=74.1
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|.|.|++|++++.. ......+|||.|.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46899999988642 1234579999999875 3567899998889999999999998764567799999998
Q ss_pred cCCCCCCccEEEEEECCCCC
Q 007887 539 DMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~ 558 (586)
+..+.+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87666899999999999887
No 141
>PLN02270 phospholipase D alpha
Probab=98.87 E-value=1.2e-08 Score=116.16 Aligned_cols=125 Identities=16% Similarity=0.255 Sum_probs=99.7
Q ss_pred ceEEEEEEEecccCCCCC-cc----------cc-cccCCCCCceEEEEEecCCCCcceecccccCCC-CCCccCcEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDF-KQ----------TH-FDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDN-WTPVWEQEFTFP 522 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~-~~----------~~-~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn-~NPvWNE~f~F~ 522 (586)
.++|.|+|+.|.+|+... .. .. ......+||||.|.+.+ ...-||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 457999999999887410 00 00 00113469999999976 345699999886 699999999998
Q ss_pred EEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcc---eEEEccCCCCCcCC-CeEEEEEEEEC
Q 007887 523 LTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSDRKGEMLN-SVRLLMRFDFV 586 (586)
Q Consensus 523 v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~g~~~~-~atL~v~~~f~ 586 (586)
+..+ .+-|.|+|+|.|..+ ..+||.+.+|+..|-.|- +|+|+.+.+|+++. ++.|-|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8766 478999999999877 679999999999999884 79999999999984 57999999984
No 142
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.84 E-value=9.7e-09 Score=105.45 Aligned_cols=137 Identities=23% Similarity=0.313 Sum_probs=104.6
Q ss_pred cCccccceeeeccccccccCCCC--CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc-ceeHHHHHHHH
Q 007887 111 MTAPLSHYFIYTGHNSYLTGNQL--SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT-PVELMKCLKSI 187 (586)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~G~Ql--~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts-~i~f~dvi~aI 187 (586)
-++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++... ++..++||..... ..+|.|+++.|
T Consensus 8 ~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~i 85 (270)
T cd08588 8 CDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLREV 85 (270)
T ss_pred CCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHHH
Confidence 47899999999999999987653 3333334567889999999999998753 4578999875543 78999999999
Q ss_pred hhcccccCCCC-eEEEecCCCCHHHHHHHHHHHH-HHhhcccccCCCcC--CCCCCChhhhc--cceeee
Q 007887 188 KEHAFSASPYP-VVITLEDHLTPHLQAKVAKMLA-ETFGDMLFVPQCEC--LQEFPSPEELK--YKIIIS 251 (586)
Q Consensus 188 ~~~AF~~S~yP-vILSlE~Hcs~~qQ~~ma~~l~-~i~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIlik 251 (586)
+++.= +.|.- |||.||++.+...+ ..+.+++ ..||+.++.|+... ....|++++|. ||-||-
T Consensus 86 ~~fL~-~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 86 VDFLD-ANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHH-hCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 99863 34444 89999999988764 3344443 68999999886433 46899999999 555544
No 143
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.83 E-value=1.1e-08 Score=111.47 Aligned_cols=161 Identities=19% Similarity=0.230 Sum_probs=106.1
Q ss_pred cccCCcceeee-eeecccCCcccccccCCCCCCCCCCCCcCC---C------C-C-C-------CCcceEEEEEEEeccc
Q 007887 408 MQGYGRAMWLM-HGMFRSNGGCGYVKKPDLQMNVGPDGQVFN---P------K-E-I-------LPVKKTLKIKVYMGDG 468 (586)
Q Consensus 408 ~Qt~d~~m~LN-~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~---p------~-~-~-------~p~~~~L~V~Visgq~ 468 (586)
.|+.-+-+.+. ..+|..|+--|.|.=|....+........- | . . . .|....|+|.|+.|++
T Consensus 230 l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y~p~~g~ltv~v~kar~ 309 (421)
T KOG1028|consen 230 LSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCYLPTAGRLTVVVIKARN 309 (421)
T ss_pred hccCEEEEEEEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEeecCCCeEEEEEEEecC
Confidence 33444444444 367888888888877722222111000000 0 0 0 0 2334679999999999
Q ss_pred CCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEEEEEccCCCCCCc
Q 007887 469 WHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIEVHEYDMSEKDDF 546 (586)
Q Consensus 469 L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~V~D~d~~~~ddf 546 (586)
|+. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.|....+ +.|+++|||+|..+++++
T Consensus 310 L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~l~l~V~d~d~~~~~~~ 383 (421)
T KOG1028|consen 310 LKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVSLELTVWDHDTLGSNDL 383 (421)
T ss_pred CCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEeCCHHHhheeEEEEEEEEcccccccce
Confidence 964 344566799999998754444567899999999999999999998875444 569999999999999999
Q ss_pred cEEEEEECCCCCCcceEE-EccCCCCCcC
Q 007887 547 AGQTCLPVSELKPGIRAV-PLSDRKGEML 574 (586)
Q Consensus 547 lGq~~ipL~~L~~GyR~i-pL~d~~g~~~ 574 (586)
||++.+...+-..|-+|+ .+...-++++
T Consensus 384 iG~~~lG~~~~~~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 384 IGRCILGSDSTGEEVRHWQEMLNSPRKPV 412 (421)
T ss_pred eeEEEecCCCCchHHHHHHHHHhCccCce
Confidence 999888777633333432 3333334443
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.75 E-value=2.9e-08 Score=114.92 Aligned_cols=104 Identities=28% Similarity=0.438 Sum_probs=88.8
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|+|.+++|++|+. .+..+-+||||++.+.+ +.-+||++++.|+||+|||++..+|.+-....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 458899999999963 45566689999999976 34689999999999999999999998877888999999
Q ss_pred EccCCCCCCccEEEEEECCCCCCcc---eEEEccCCC
Q 007887 537 EYDMSEKDDFAGQTCLPVSELKPGI---RAVPLSDRK 570 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~~Gy---R~ipL~d~~ 570 (586)
|+|...+++.||++.++|..|.+|. -.|||-.+.
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 9999999999999999999999884 347775443
No 145
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.35 E-value=1.8e-07 Score=103.24 Aligned_cols=95 Identities=23% Similarity=0.355 Sum_probs=76.6
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC--CcceecccccCCCCCCccCcEEEEEEEc----CCccE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA--DQIMKKTKPKEDNWTPVWEQEFTFPLTV----PELAL 530 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~--D~~k~kTkvi~nn~NPvWNE~f~F~v~~----pela~ 530 (586)
++|.|.|+.|.++.. .|.++.+||||.|++..-.. -...+||+++..++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 467888888887742 35567889999999864211 1335799999999999999999999853 24589
Q ss_pred EEEEEEEccCCCCCCccEEEEEECCCC
Q 007887 531 LRIEVHEYDMSEKDDFAGQTCLPVSEL 557 (586)
Q Consensus 531 Lrf~V~D~d~~~~ddflGq~~ipL~~L 557 (586)
|.|+|.|+|....+||.|.+.+.|..+
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCC
Confidence 999999999999999999999888776
No 146
>PLN02352 phospholipase D epsilon
Probab=98.32 E-value=3.3e-06 Score=96.41 Aligned_cols=118 Identities=17% Similarity=0.262 Sum_probs=88.5
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
.++|.++|..|.-+...... ........||||.|.+.+ ...-|| .|.-||+|||+|...+..+-.+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~----~~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGN----KKVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCC----cEEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 46799999998732211110 000112239999999976 234466 4556999999999998876446799999
Q ss_pred EEccCCCCCCccEEEEEECCCCCCcc----eEEEccCCCCCcCCCeEEEEEEEEC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKPGI----RAVPLSDRKGEMLNSVRLLMRFDFV 586 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~Gy----R~ipL~d~~g~~~~~atL~v~~~f~ 586 (586)
+| ...+||.+.+|+..|-.|- +|+|+.+.+|+++.++.|-|+++|+
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 98 2679999999999998883 6999999999999888999999884
No 147
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=97.95 E-value=2.2e-05 Score=91.67 Aligned_cols=93 Identities=20% Similarity=0.384 Sum_probs=73.1
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
+.|.|+|.+|.++... ..-..+.+||||.+...+ ...-||++++|++||+|||+|-..+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~~----d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKKS----DSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCcccc----cccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 5789999999998432 112346689999999764 3445999999999999999998877521 134899999
Q ss_pred EccCCCCCCccEEEEEECCCCC
Q 007887 537 EYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~ 558 (586)
|.+...+|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9777788999999999988875
No 148
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=97.92 E-value=1.6e-05 Score=69.54 Aligned_cols=88 Identities=16% Similarity=0.239 Sum_probs=62.5
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEY 538 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~ 538 (586)
|+|+|.+++++.-. ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|.+. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889998887321 1111345679999999865 457788874 68999999999984 355799999997
Q ss_pred cCCCCCCccEEEEEECCCCCC
Q 007887 539 DMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~ 559 (586)
.. ...-.+|..-++++.|..
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~E 88 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIAE 88 (109)
T ss_pred CC-CeecceeeehhhHHHHHH
Confidence 53 234567777777766543
No 149
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.82 E-value=6.1e-05 Score=81.81 Aligned_cols=119 Identities=18% Similarity=0.291 Sum_probs=90.7
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccC-cEEEEEEEcCCcc--EEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWE-QEFTFPLTVPELA--LLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWN-E~f~F~v~~pela--~Lrf 533 (586)
++|.|+|..|++||...+.. ...|.||+|.+.. ..+||.+....+||.|| +-|.|.|...++. -|.+
T Consensus 3 gkl~vki~a~r~lpvmdkas-----d~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDKAS-----DLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccccccc-----ccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 45889999999998753221 2367899999874 67899999999999998 6799999877663 5899
Q ss_pred EEEEccCCCCCCccEEEEEECCCCC----------Cc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELK----------PG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~----------~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
.+.|+|....+|-||.+.|.++-|. .| --|+|++|.-...-+...+.|+++.
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdl 137 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDL 137 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEee
Confidence 9999999888999999999988663 22 2478988854333333466677664
No 150
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.79 E-value=7.8e-05 Score=83.11 Aligned_cols=111 Identities=24% Similarity=0.398 Sum_probs=83.3
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVH 536 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~ 536 (586)
..|.|+|..|++||.. +..+..|||+.|.+.. +...||.+|..++.|.|.|+|.|.+. +....|.|-||
T Consensus 5 ~sl~vki~E~knL~~~------~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP-~~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPSY------GPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIP-RTFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCCC------CCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecC-cceeeEEEEEe
Confidence 3589999999999752 3345679999998853 45689999999999999999999884 33566899999
Q ss_pred EccCCCCCCccEEEEEECCCCC--Ccc-eEEEc--cCCCCCcCCCeEE
Q 007887 537 EYDMSEKDDFAGQTCLPVSELK--PGI-RAVPL--SDRKGEMLNSVRL 579 (586)
Q Consensus 537 D~d~~~~ddflGq~~ipL~~L~--~Gy-R~ipL--~d~~g~~~~~atL 579 (586)
|.| .++|+.||.++|.-..|. +|. .|+.| .|++.+.-+..-|
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~v~l 120 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGKVHL 120 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhceeEEE
Confidence 999 788999999999866653 343 23444 5666665443333
No 151
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.74 E-value=0.00011 Score=80.75 Aligned_cols=103 Identities=27% Similarity=0.407 Sum_probs=81.1
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCC-C-cceecccccCCCCCCccCcEEEEEEEc---CCccEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPA-D-QIMKKTKPKEDNWTPVWEQEFTFPLTV---PELALL 531 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~-D-~~k~kTkvi~nn~NPvWNE~f~F~v~~---pela~L 531 (586)
..++|+|+.|.+|.+. + .+.-.|||+|.|.|... | +.|+.|++..||..|.|||+|.|.+.. |+---|
T Consensus 1125 hkvtvkvvaandlkwq---t----sgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ---T----SGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch---h----ccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 4689999999988652 1 23346799999998543 3 345678888999999999999998864 555679
Q ss_pred EEEEEEccCCCCCCccEEEEEECCCCC-Ccc--eEEEc
Q 007887 532 RIEVHEYDMSEKDDFAGQTCLPVSELK-PGI--RAVPL 566 (586)
Q Consensus 532 rf~V~D~d~~~~ddflGq~~ipL~~L~-~Gy--R~ipL 566 (586)
.|+|+|+.....|..+|.+.++|.++. .|- -|+||
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 999999998887889999999999985 353 47887
No 152
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.69 E-value=3.3e-05 Score=89.70 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=78.4
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEE-EcCCc--cEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPL-TVPEL--ALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v-~~pel--a~Lrf 533 (586)
.+|+|-|..+++|+.- ..+..+||||+..+...|....|+||++++.+.||.|||.+.+.. ....+ ..|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4688888888888542 113457999999999988888999999999999999999999873 22222 46899
Q ss_pred EEEEccCCCCCCccEEEEEECCCCC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
.||..+....+.|+|.++|||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988778899999999998874
No 153
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.66 E-value=0.00032 Score=72.56 Aligned_cols=135 Identities=19% Similarity=0.290 Sum_probs=95.8
Q ss_pred CccccceeeeccccccccCCCCC---------CCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeccccccceeHH
Q 007887 112 TAPLSHYFIYTGHNSYLTGNQLS---------SDCSDVPIIKALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELM 181 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~G~Ql~---------g~SS~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~ 181 (586)
+.||++=.|--|||+.--+-... +..--.....-|..|.|-+.|.|.-.+ ++++-.++||-... .+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~~--~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVRI--VPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECccccc--ccHH
Confidence 56999999999999875432221 111122356778999999999996432 22456788875432 8999
Q ss_pred HHHHHHhhcccccCCCCeEEEecCCCC------HHHHHHHHHHHHHHhhcccccCCCcCCCCCCChhhh--ccceeee
Q 007887 182 KCLKSIKEHAFSASPYPVVITLEDHLT------PHLQAKVAKMLAETFGDMLFVPQCECLQEFPSPEEL--KYKIIIS 251 (586)
Q Consensus 182 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (586)
+|++.|+++.=.. .=-|||.+ +|.. +++-..+.++|.++||+.|+.+.. ....-|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999975444 66688887 4443 577788999999999999997753 23456899996 5666555
No 154
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.59 E-value=9e-05 Score=76.33 Aligned_cols=104 Identities=20% Similarity=0.297 Sum_probs=77.7
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCcc--EEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELA--LLRIEV 535 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela--~Lrf~V 535 (586)
.|.|+++.+..+. .+|..+-+||||.+.+...-....++||++.+++.||+||+.|.|.+..-+|+ .+.+.|
T Consensus 234 ~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 4788888876663 35666778999998887333334577999999999999999999999888886 477899
Q ss_pred EEccCCCCCCccEEEEEECCCCCCcceEEEccCCCCCc
Q 007887 536 HEYDMSEKDDFAGQTCLPVSELKPGIRAVPLSDRKGEM 573 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L~~GyR~ipL~d~~g~~ 573 (586)
||++.....+++|-.. .-+||--++++..|.+
T Consensus 308 gd~~~G~s~d~~GG~~------~g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSM------LGGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCccc------ccccccchhhcCcccc
Confidence 9998766778887532 3356666666666654
No 155
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.58 E-value=0.00053 Score=71.26 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=95.2
Q ss_pred CccccceeeeccccccccCCCCCC---------------------CCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEe
Q 007887 112 TAPLSHYFIYTGHNSYLTGNQLSS---------------------DCSDVPIIKALKRGVRVVELDIWPNS-TKDDVHVL 169 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~G~Ql~g---------------------~SS~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~ 169 (586)
+.||.+..|-.|||+.--+-.-.+ ..--.....-|..|+|-+.|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999997643322111 11112245678899999999995432 12456788
Q ss_pred eccccccceeHHHHHHHHhhcccccCCCCeEEEecC-----CCCHHHHHHHHHHHHHHhhcccccCCCcCCCCCCChhhh
Q 007887 170 HGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLED-----HLTPHLQAKVAKMLAETFGDMLFVPQCECLQEFPSPEEL 244 (586)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (586)
||-.- -.+|.+|++.|+++.=....=-|||.++. +++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 88422 28899999999987544445568898863 3446788888899999999999975 223456789999
Q ss_pred c--cceeee
Q 007887 245 K--YKIIIS 251 (586)
Q Consensus 245 k--~KIlik 251 (586)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 9 775544
No 156
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.31 E-value=0.00058 Score=76.38 Aligned_cols=75 Identities=25% Similarity=0.449 Sum_probs=62.0
Q ss_pred CCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcC---------------CccEEEEEEEE-ccCCCCCCc
Q 007887 483 PPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVP---------------ELALLRIEVHE-YDMSEKDDF 546 (586)
Q Consensus 483 ~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~p---------------ela~Lrf~V~D-~d~~~~ddf 546 (586)
..|||++|...|.-... .++|++++.+-||.|||.|.|.+..+ ++.-|++.+|+ .+....++|
T Consensus 150 ~~dp~~~v~~~g~~~~~-~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~F 228 (800)
T KOG2059|consen 150 QCDPFARVTLCGPSKLK-EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDVF 228 (800)
T ss_pred CCCcceEEeecccchhh-ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhhh
Confidence 37999999988743322 37899999999999999999998766 56678999998 555566899
Q ss_pred cEEEEEECCCCC
Q 007887 547 AGQTCLPVSELK 558 (586)
Q Consensus 547 lGq~~ipL~~L~ 558 (586)
+|+..+|+..++
T Consensus 229 lGevrv~v~~~~ 240 (800)
T KOG2059|consen 229 LGEVRVPVDVLR 240 (800)
T ss_pred ceeEEeehhhhh
Confidence 999999999887
No 157
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=97.12 E-value=0.0011 Score=60.00 Aligned_cols=73 Identities=19% Similarity=0.399 Sum_probs=54.9
Q ss_pred CCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc----C-----------CccEEEEEEEEccCCC------
Q 007887 484 PDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV----P-----------ELALLRIEVHEYDMSE------ 542 (586)
Q Consensus 484 ~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~----p-----------ela~Lrf~V~D~d~~~------ 542 (586)
.++||+|.+.-+|.. ..++|+++.++|-|.|+.+++|.+.. + +.+-|.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 478999998876654 46789999999999999999997541 1 2256899999865322
Q ss_pred ----CCCccEEEEEECCCC
Q 007887 543 ----KDDFAGQTCLPVSEL 557 (586)
Q Consensus 543 ----~ddflGq~~ipL~~L 557 (586)
+|-+||.+.||+..|
T Consensus 112 ~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 112 IETSGDILLGTVKIPLRDL 130 (143)
T ss_pred cCcCCcEEEEEEEeeHHHH
Confidence 344778888887766
No 158
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=97.12 E-value=0.0044 Score=64.58 Aligned_cols=135 Identities=21% Similarity=0.253 Sum_probs=89.3
Q ss_pred Cccccceeeecccccc--cc-CCCCCCC------------------------CChHHHHHHHhcCCcEEEEEeecCCCCC
Q 007887 112 TAPLSHYFIYTGHNSY--LT-GNQLSSD------------------------CSDVPIIKALKRGVRVVELDIWPNSTKD 164 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTY--L~-G~Ql~g~------------------------SS~e~Y~~aL~~GCRcvElD~Wdg~~~~ 164 (586)
+.||.+..|--|||+- -+ .+.-.|. .--.....-|..|.|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 4699999999999963 22 2221111 1112245678899999999996433234
Q ss_pred CceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCC---CHHHHHHHHHHHHHHhhcccccCCCcCCCCCCCh
Q 007887 165 DVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHL---TPHLQAKVAKMLAETFGDMLFVPQCECLQEFPSP 241 (586)
Q Consensus 165 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP 241 (586)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 578999843 22 99999999998643333455888886 33 3355567888999999999985432 1344789
Q ss_pred hhhc--cc-eeeec
Q 007887 242 EELK--YK-IIIST 252 (586)
Q Consensus 242 ~~Lk--~K-Ilik~ 252 (586)
++|. || |||-.
T Consensus 161 ~~l~~~~krVIi~y 174 (290)
T cd08616 161 EYLWEKGYQVIVFY 174 (290)
T ss_pred HHHHhCCCEEEEEE
Confidence 9997 33 44443
No 159
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=97.06 E-value=0.008 Score=57.04 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=67.4
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCc-ceecccccCCCCCCccCcEEEEEEEcCCc---cEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQ-IMKKTKPKEDNWTPVWEQEFTFPLTVPEL---ALLR 532 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~-~k~kTkvi~nn~NPvWNE~f~F~v~~pel---a~Lr 532 (586)
..++|+|+++.+++.. ...|-||++++......- ....|+.+.. -++.|||.++|+|...++ |.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 3589999999887542 124679999887421111 1223443332 469999999999875444 8999
Q ss_pred EEEEEccCCC----CCCccEEEEEECC----CCCCcceEEEcc
Q 007887 533 IEVHEYDMSE----KDDFAGQTCLPVS----ELKPGIRAVPLS 567 (586)
Q Consensus 533 f~V~D~d~~~----~ddflGq~~ipL~----~L~~GyR~ipL~ 567 (586)
|+||+..... ....+|++.++|- .|++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999975321 1246999999975 467897666553
No 160
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=97.00 E-value=0.0057 Score=58.75 Aligned_cols=112 Identities=22% Similarity=0.215 Sum_probs=74.0
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCC-cceeccccc--CCCC--CCccCcEEEEEEEcCC---c
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPAD-QIMKKTKPK--EDNW--TPVWEQEFTFPLTVPE---L 528 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D-~~k~kTkvi--~nn~--NPvWNE~f~F~v~~pe---l 528 (586)
..+.|+|.++.+++..... ...|.||++++...... +....|+.. .+.+ .+.|||.++|++...+ .
T Consensus 8 ~~~~i~v~~~h~~~~~~~~------~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPre 81 (171)
T cd04012 8 DLLSVTVSSLHRIPPTWVQ------SFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPRE 81 (171)
T ss_pred ccEEEEEEEeecCChHHhh------ccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCChh
Confidence 4589999999988753211 12467999988742211 112244432 2332 5789999999886544 4
Q ss_pred cEEEEEEEEccCCC---------CCCccEEEEEECC----CCCCcceEEEccC-CCCCcC
Q 007887 529 ALLRIEVHEYDMSE---------KDDFAGQTCLPVS----ELKPGIRAVPLSD-RKGEML 574 (586)
Q Consensus 529 a~Lrf~V~D~d~~~---------~ddflGq~~ipL~----~L~~GyR~ipL~d-~~g~~~ 574 (586)
|.|.|+||+..... ....||++.++|- .|++|...+.|.- ....++
T Consensus 82 arL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~ 141 (171)
T cd04012 82 SRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPL 141 (171)
T ss_pred HEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcC
Confidence 89999999975433 3569999999975 5789988888853 333444
No 161
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=96.94 E-value=0.011 Score=56.97 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=68.9
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCC-cceecccccCCCCCCccCcEEEEEEEc---CCccEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPAD-QIMKKTKPKEDNWTPVWEQEFTFPLTV---PELALLR 532 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D-~~k~kTkvi~nn~NPvWNE~f~F~v~~---pela~Lr 532 (586)
..++|+|+++.++... ....+.||++++...... +....|+.+.-+-.+.|||.++|+|.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~~--------~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNAA--------ERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCccC--------CCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 3589999999988641 122456888887642111 122345544434569999999998865 4458999
Q ss_pred EEEEEccCCC----------------CCCccEEEEEECC----CCCCcceEEEcc
Q 007887 533 IEVHEYDMSE----------------KDDFAGQTCLPVS----ELKPGIRAVPLS 567 (586)
Q Consensus 533 f~V~D~d~~~----------------~ddflGq~~ipL~----~L~~GyR~ipL~ 567 (586)
|+||+..... ....||++.++|- .|+.|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999865321 1368999999875 467897766653
No 162
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.92 E-value=0.00033 Score=78.20 Aligned_cols=66 Identities=26% Similarity=0.558 Sum_probs=51.8
Q ss_pred ecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCC---------------------------------C---CCC
Q 007887 502 KKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMS---------------------------------E---KDD 545 (586)
Q Consensus 502 ~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd 545 (586)
+-|.+.+.++||.|+|.|.|.|..-.-..+.+-+||+|.. + .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 3477777889999999999998765556788999998743 1 389
Q ss_pred ccEEEEEECCCCCC-cc-eEEEcc
Q 007887 546 FAGQTCLPVSELKP-GI-RAVPLS 567 (586)
Q Consensus 546 flGq~~ipL~~L~~-Gy-R~ipL~ 567 (586)
|+|+..|||.++.+ |. +|..|-
T Consensus 259 FLGciNipl~EiP~~Gld~WFkLe 282 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPPDGLDQWFKLE 282 (1103)
T ss_pred cccccccchhcCCcchHHHHhccC
Confidence 99999999999975 53 566553
No 163
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=96.91 E-value=0.011 Score=55.71 Aligned_cols=103 Identities=18% Similarity=0.182 Sum_probs=68.4
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcc-eecccccCCCCCCccCcEEEEEEEcCC---ccEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQI-MKKTKPKEDNWTPVWEQEFTFPLTVPE---LALLRI 533 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~-k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~Lrf 533 (586)
.++|+|....+.... .....+.||++++........ ...|+.....-++.|||.++|++...+ .|.|.|
T Consensus 9 ~~~i~i~~~~~~~~~-------~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINLL-------DSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeecccccc-------CCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 477888777765420 112346688888864221111 223433333357999999999876544 489999
Q ss_pred EEEEccCCC--CCCccEEEEEECC----CCCCcceEEEcc
Q 007887 534 EVHEYDMSE--KDDFAGQTCLPVS----ELKPGIRAVPLS 567 (586)
Q Consensus 534 ~V~D~d~~~--~ddflGq~~ipL~----~L~~GyR~ipL~ 567 (586)
+||+.+..+ ....||++.++|- .|++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999976443 3579999999975 468898888875
No 164
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=96.85 E-value=0.00086 Score=77.49 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=75.3
Q ss_pred CcceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEE
Q 007887 454 PVKKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRI 533 (586)
Q Consensus 454 p~~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf 533 (586)
|+...++|.|..|.+|.. .|..+..||||.|.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 445567788888888843 355577899999998651 12346778899999999999999888887788999
Q ss_pred EEEEccCCCCCCccEEEEEECCC
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSE 556 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~ 556 (586)
.|||+|..+.++.||+..+.+..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999998889999999988653
No 165
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.82 E-value=0.00028 Score=72.74 Aligned_cols=98 Identities=20% Similarity=0.315 Sum_probs=75.9
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC---ccEEEE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE---LALLRI 533 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~Lrf 533 (586)
..+..++..|.+|.. .+..+..||||+..+........+.+|++..|+.||.|||+..+.....+ ...+|.
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457888999988733 34557789999988765444455688999999999999998777654333 246889
Q ss_pred EEEEccCCCCCCccEEEEEECCCCCCc
Q 007887 534 EVHEYDMSEKDDFAGQTCLPVSELKPG 560 (586)
Q Consensus 534 ~V~D~d~~~~ddflGq~~ipL~~L~~G 560 (586)
.|.|.+....++++|+.-+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999998888654
No 166
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.71 E-value=0.0071 Score=57.89 Aligned_cols=64 Identities=23% Similarity=0.219 Sum_probs=51.4
Q ss_pred CCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCCCCH
Q 007887 132 QLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHLTP 209 (586)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 209 (586)
+...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|+||++..++ -+.|.||.=...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999995444 46999998 6789999998776 345667766653
No 167
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.64 E-value=0.0089 Score=59.96 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
.-+-|.+++..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45789999999999999999999996444 47999999877
No 168
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.63 E-value=0.0055 Score=61.03 Aligned_cols=40 Identities=25% Similarity=0.334 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
.-+-|.+|+..|+..|+.+||+||+=-.| +.+||+|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 45778999999999999999999997555 47999998775
No 169
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.61 E-value=0.008 Score=57.11 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=59.2
Q ss_pred CCceEEEEEecCCCC-cceecccccCCCCCCccCcEEEEEEEcCCc---cEEEEEEEEccCCCCCCccEEEEEECC----
Q 007887 484 PDFYCKVGIAGVPAD-QIMKKTKPKEDNWTPVWEQEFTFPLTVPEL---ALLRIEVHEYDMSEKDDFAGQTCLPVS---- 555 (586)
Q Consensus 484 ~DPyV~V~i~g~p~D-~~k~kTkvi~nn~NPvWNE~f~F~v~~pel---a~Lrf~V~D~d~~~~ddflGq~~ipL~---- 555 (586)
+|.||++.|...... +....|+.+.-+-.+.|||.++|+|...++ |.|.|+||+.+..+....+|+++++|-
T Consensus 30 ~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~g 109 (159)
T cd08397 30 SDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKDG 109 (159)
T ss_pred CCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCCC
Confidence 567999888642111 112244444334458899999999876554 899999999875555679999999976
Q ss_pred CCCCcceEEEcc
Q 007887 556 ELKPGIRAVPLS 567 (586)
Q Consensus 556 ~L~~GyR~ipL~ 567 (586)
.|+.|...+.|.
T Consensus 110 ~Lr~G~~~l~lw 121 (159)
T cd08397 110 TLRRGRQKLRVW 121 (159)
T ss_pred cEecCCEEEEEE
Confidence 467898877774
No 170
>PLN02964 phosphatidylserine decarboxylase
Probab=96.54 E-value=0.0055 Score=69.94 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=69.2
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
.+...|++++|. . + -.|+|..+-..| .+.+||.+.+++.||+||+.-.|.+...+..+.+|.|
T Consensus 53 ~~~~~~~~~~~~-~---------~---~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 115 (644)
T PLN02964 53 SGIALLTLVGAE-M---------K---FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARISV 115 (644)
T ss_pred cCeEEEEeehhh-h---------c---cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEEE
Confidence 456788998886 1 1 137776555555 4678999999999999999999999887888889999
Q ss_pred EEccCCCCCCccEEEEEECCCC
Q 007887 536 HEYDMSEKDDFAGQTCLPVSEL 557 (586)
Q Consensus 536 ~D~d~~~~ddflGq~~ipL~~L 557 (586)
+|.+....++++|-+.+++..+
T Consensus 116 ~~~~~~s~n~lv~~~e~~~t~f 137 (644)
T PLN02964 116 FETNRLSKNTLVGYCELDLFDF 137 (644)
T ss_pred EecCCCCHHHhhhheeecHhhc
Confidence 9999989999999998877655
No 171
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.39 E-value=0.0084 Score=59.58 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=35.2
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
..-+.|.++|..|+..||.+||+||+=-.| +.|||.|-.||
T Consensus 10 ~~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 10 NGVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 345788999999999999999999996555 47999999876
No 172
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.32 E-value=0.005 Score=61.36 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=32.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
..+.|.++++.|+..|+++||+|||=-.| +.|||+|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCee
Confidence 44899999999999999999999996555 47999998654
No 173
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=96.32 E-value=0.0063 Score=51.64 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=59.7
Q ss_pred EEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc--cEEEEEEEEc
Q 007887 461 IKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL--ALLRIEVHEY 538 (586)
Q Consensus 461 V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel--a~Lrf~V~D~ 538 (586)
|+|+.+.++..+. .....+.-||+= +..+| .....||.+.+...||+|+|+|.|++....+ ..|.|.|+..
T Consensus 3 itv~~c~d~s~~~-----~~~e~~~i~ikg-~~tl~-kpv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~~ 75 (103)
T cd08684 3 ITVLKCKDLSWPS-----SCGENPTIYIKG-ILTLP-KPVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQTQ 75 (103)
T ss_pred EEEEEeccccccc-----ccCcCCeeEEEE-EEecC-CCccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeecc
Confidence 5677777775431 111112224432 22223 2456788888888999999999999876555 3577888873
Q ss_pred cCCCCCCccEEEEEECCCCCC
Q 007887 539 DMSEKDDFAGQTCLPVSELKP 559 (586)
Q Consensus 539 d~~~~ddflGq~~ipL~~L~~ 559 (586)
..+.+.||++.+.++++.+
T Consensus 76 --~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 76 --TPRKRTIGECSLSLRTLST 94 (103)
T ss_pred --CCccceeeEEEeecccCCH
Confidence 3567899999999988754
No 174
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=96.09 E-value=0.016 Score=57.90 Aligned_cols=40 Identities=23% Similarity=0.391 Sum_probs=34.7
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999996555 47999998766
No 175
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.08 E-value=0.021 Score=58.16 Aligned_cols=41 Identities=27% Similarity=0.286 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.=+-|.++|..|+..||..||+||+=-.| +.|||+|-.||.
T Consensus 13 ~pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 13 LPENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 34778999999999999999999996555 479999999873
No 176
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.96 E-value=0.033 Score=57.50 Aligned_cols=137 Identities=22% Similarity=0.258 Sum_probs=89.4
Q ss_pred cccCccccceeeecccccccc---CCCCC---CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHH
Q 007887 109 QDMTAPLSHYFIYTGHNSYLT---GNQLS---SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMK 182 (586)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~---G~Ql~---g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (586)
-|-+.||++=.|--||||.-. +..+. +..--.....-|..|+|-+.|-|=. ...++||.. ...+|.|
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 345789999999999998743 22221 1222234677899999999999854 257999963 2368999
Q ss_pred HHHHHhhcccccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcccccCCCcCCCCCCChhhhccc-eeeeccC
Q 007887 183 CLKSIKEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFVPQCECLQEFPSPEELKYK-IIISTKP 254 (586)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (586)
|++.|+++-=....=-|||++......+......+.|.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998642233344999996444332222355788899999998653 222222 67777654 4444443
No 177
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=95.86 E-value=0.053 Score=52.46 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=62.9
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCc---cEEEEE
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPEL---ALLRIE 534 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pel---a~Lrf~ 534 (586)
.++|+|.++...... .......||++.+.....-....+|.....+-+|.|||.++|+|...++ |.|.|+
T Consensus 11 ~friki~~~~~~~~~-------~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVLP-------RNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCcC-------CCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 478888887633211 1111235788877641111122345554445579999999999875554 899999
Q ss_pred EEEccCC----------------CCCCccEEEEEECC----CCCCcceEEEc
Q 007887 535 VHEYDMS----------------EKDDFAGQTCLPVS----ELKPGIRAVPL 566 (586)
Q Consensus 535 V~D~d~~----------------~~ddflGq~~ipL~----~L~~GyR~ipL 566 (586)
||+.... ...-.||++.+.|- .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 9985211 12457888988875 46788765544
No 178
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.74 E-value=0.078 Score=55.00 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=88.3
Q ss_pred CccccceeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEe---ecC----CCCCCceEeeccccccceeHHHHH
Q 007887 112 TAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDI---WPN----STKDDVHVLHGRTLTTPVELMKCL 184 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~---Wdg----~~~~~piv~HG~Tlts~i~f~dvi 184 (586)
++||++..|-.|||+.-.+---.+..--.....-|..|.|-+.|=| ++. ...++-..+|| +-.-.+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 6799999999999986554221122223345678899999988866 221 01123334555 44557999999
Q ss_pred HHHhhcccccCCCCeEEEecC-----CCCHHHHHHHHHHHHHHhhcccccCC--CcCCCCCCChhhhcc---ceeeec
Q 007887 185 KSIKEHAFSASPYPVVITLED-----HLTPHLQAKVAKMLAETFGDMLFVPQ--CECLQEFPSPEELKY---KIIIST 252 (586)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~-----Hcs~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~ 252 (586)
+.|+.+.=....=-|||++-+ ||-.+.+..+.+.+.++|++.-+.+. ......-|+.++|.+ ++||-.
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y 161 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSAQEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLF 161 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhHHHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEE
Confidence 999986544445669999942 44333346778889999988554432 111233578999954 455544
No 179
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.64 E-value=0.033 Score=56.02 Aligned_cols=97 Identities=18% Similarity=0.308 Sum_probs=65.9
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------ceeHHHHHHHHhhc--cc-
Q 007887 122 TGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT------PVELMKCLKSIKEH--AF- 192 (586)
Q Consensus 122 SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 192 (586)
-|||-|.--. ....||..||-.||+|||=- + ++.+|.|-..+.. ++.+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 4999998744 34569999999999999953 2 4678988765443 35566666665544 23
Q ss_pred ccCCCCeEEEecCCCCHHHHHHHHHHHHHHhhccccc
Q 007887 193 SASPYPVVITLEDHLTPHLQAKVAKMLAETFGDMLFV 229 (586)
Q Consensus 193 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (586)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998765434444444445555554
No 180
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.64 E-value=0.058 Score=54.41 Aligned_cols=40 Identities=33% Similarity=0.388 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
.-+-|..++.+|+..||..||+|+|=-.| +.|||+|=.|+
T Consensus 11 ~pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 11 WPENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 34778999999999999999999995444 47999998876
No 181
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=95.61 E-value=0.05 Score=46.43 Aligned_cols=63 Identities=11% Similarity=0.302 Sum_probs=49.9
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHH--hCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 24 DVKEAFNKYAEG---GTHMTAEQLRRFLLEV--QGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 24 el~~if~~~~~~---~~~~~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
.|-.+|.+|++. ..+|+.++|++.|..+ .++. .+.+++.++++....+ +.+.+++++|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~d-------~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDRN-------KDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCC-------CCCCCcHHHHHHHHH
Confidence 577899999973 3589999999999752 4654 6889999999886421 346899999998886
No 182
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.59 E-value=0.034 Score=51.58 Aligned_cols=82 Identities=22% Similarity=0.309 Sum_probs=53.4
Q ss_pred ceEEEEEecCCCCcc--eecccccCCC-CCCccCcEEEEEEEc---CCccEEEEEEEEccCCCCC----CccEEEEEECC
Q 007887 486 FYCKVGIAGVPADQI--MKKTKPKEDN-WTPVWEQEFTFPLTV---PELALLRIEVHEYDMSEKD----DFAGQTCLPVS 555 (586)
Q Consensus 486 PyV~V~i~g~p~D~~--k~kTkvi~nn-~NPvWNE~f~F~v~~---pela~Lrf~V~D~d~~~~d----dflGq~~ipL~ 555 (586)
.||+++|.-....-. ...|+.+.-+ .++.|||.++|.+.. |-.|.|.|+|+..+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 366666652111111 2255555444 689999999999875 4458999999997754434 68999999976
Q ss_pred C----CCCcceEEEcc
Q 007887 556 E----LKPGIRAVPLS 567 (586)
Q Consensus 556 ~----L~~GyR~ipL~ 567 (586)
. |++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 4 67787777774
No 183
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.50 E-value=0.049 Score=55.06 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 135 SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
-+-|.++|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 3778999999999999999999997555 47999998765
No 184
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=95.20 E-value=0.076 Score=54.36 Aligned_cols=40 Identities=20% Similarity=0.205 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
.-+-|..+|.+|+..||..||+|||=-.| +.|||+|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996555 46999997655
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=95.17 E-value=0.082 Score=52.78 Aligned_cols=79 Identities=20% Similarity=0.328 Sum_probs=54.6
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc------------------------ce-eHHHHHHHH
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT------------------------PV-ELMKCLKSI 187 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts------------------------~i-~f~dvi~aI 187 (586)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+.. +| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 455789999999999999999999995444 4799999876521 24 589999876
Q ss_pred hhcccccCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 007887 188 KEHAFSASPYPVVITLEDHLTPHLQAKVAKMLAE 221 (586)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~ 221 (586)
++. +.|-||.-.. .....+++.+++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~~ 114 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVEK 114 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHHH
Confidence 542 2456665532 223445555543
No 186
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.84 E-value=0.13 Score=52.72 Aligned_cols=40 Identities=30% Similarity=0.474 Sum_probs=33.6
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRT 173 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~T 173 (586)
+.-+-|..||..|+..|+..||+|||=-.| +.|||+|..|
T Consensus 17 ~~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 17 LYPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 356789999999999999999999995444 4799999863
No 187
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=94.35 E-value=0.056 Score=55.49 Aligned_cols=42 Identities=24% Similarity=0.322 Sum_probs=36.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT 176 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts 176 (586)
.-+-|.+++..|+..||++||+|++=-.| +.|||+|-.||..
T Consensus 13 ~pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 13 FPENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 35778999999999999999999997655 5799999988643
No 188
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.34 E-value=0.18 Score=49.36 Aligned_cols=48 Identities=17% Similarity=0.118 Sum_probs=42.4
Q ss_pred CChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHh
Q 007887 137 CSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIK 188 (586)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (586)
-|..++.+|+.. .-||+|++.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 7 NTl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 7 NTITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 358999999998 9999999986 5 5799999999988888999998874
No 189
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.09 E-value=0.065 Score=54.28 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45789999999999999999999995444 479999998874
No 190
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.69 E-value=0.038 Score=58.34 Aligned_cols=106 Identities=25% Similarity=0.291 Sum_probs=76.6
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
+..+.|+||.|++|.... ...+.++|||+|.+.+...-..+.+|+...++..|.+-....|.-. |.-..|...|
T Consensus 268 ~g~l~vEii~ar~l~~k~-----~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~s-p~~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVKP-----GSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQS-PPGKYLQGTV 341 (405)
T ss_pred cCceeEEEEecccccccC-----CcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccC-CCccEEEEEE
Confidence 356999999999995421 1123579999999987665566889999999999988888887643 3357788888
Q ss_pred EE-ccCCCCCCccEEEEEECCCCC----CcceEEEcc
Q 007887 536 HE-YDMSEKDDFAGQTCLPVSELK----PGIRAVPLS 567 (586)
Q Consensus 536 ~D-~d~~~~ddflGq~~ipL~~L~----~GyR~ipL~ 567 (586)
|. +.....+.|+|.+.+-+..|. .+.-|.+|+
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlf 378 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLF 378 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeecc
Confidence 85 344445678998888777764 344555554
No 191
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=93.66 E-value=0.071 Score=54.33 Aligned_cols=41 Identities=27% Similarity=0.313 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+-|..+|..|+..||..||+||+=-.| +.|||+|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 35778999999999999999999996555 479999998863
No 192
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=93.24 E-value=0.92 Score=44.29 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=30.8
Q ss_pred ceecccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEcc
Q 007887 500 IMKKTKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYD 539 (586)
Q Consensus 500 ~k~kTkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d 539 (586)
..++|-+..-+-+|.|+|++.+.+... +.+-|+|.++...
T Consensus 53 se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S 94 (189)
T cd08695 53 SEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCS 94 (189)
T ss_pred ceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEee
Confidence 456788888788999999998887643 3477999888754
No 193
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.20 E-value=0.099 Score=53.18 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+-|.+++..|+..||..||+|||=-.| +.|||+|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 45889999999999999999999996555 479999998873
No 194
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=93.17 E-value=0.12 Score=53.14 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 456778999999999999999999995444 479999998863
No 195
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.08 E-value=0.1 Score=52.40 Aligned_cols=41 Identities=27% Similarity=0.295 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+-|..+|.+|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 11 ~PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 11 YPENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 34778999999999999999999997555 579999999874
No 196
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=93.02 E-value=0.11 Score=54.89 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=36.4
Q ss_pred CCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 132 QLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 11 ~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 11 GYLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 3456889999999999999999999996544 479999999873
No 197
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=93.00 E-value=0.12 Score=55.46 Aligned_cols=42 Identities=21% Similarity=0.230 Sum_probs=36.1
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.=+.|.++|..|+..|+.-||+|||=-.| +.|||+|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 455889999999999999999999996555 479999998764
No 198
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=92.99 E-value=0.19 Score=55.77 Aligned_cols=83 Identities=20% Similarity=0.305 Sum_probs=65.8
Q ss_pred ecccccCCCCCCccCcEEEEEEEcCCccEEEEEEEEccCC----CCCCccEEEEEECCCCC-CcceEEEccCCCCCcCCC
Q 007887 502 KKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEVHEYDMS----EKDDFAGQTCLPVSELK-PGIRAVPLSDRKGEMLNS 576 (586)
Q Consensus 502 ~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~----~~ddflGq~~ipL~~L~-~GyR~ipL~d~~g~~~~~ 576 (586)
.+|.++.+..||.|-+.|.....+++...|+|.|+|-+.. ...+|+|++..-++.+. ..-+.++|.-+.++.-..
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4889999999999999999888888888999999997643 34689999998888764 445667776666666666
Q ss_pred eEEEEEEE
Q 007887 577 VRLLMRFD 584 (586)
Q Consensus 577 atL~v~~~ 584 (586)
+++.|+.+
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 77877764
No 199
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=92.95 E-value=0.12 Score=54.16 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+-|.+++..|+..||+.||+|+|=-.| ++|||+|=.|+.
T Consensus 39 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 39 NLENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 34778999999999999999999996444 479999988863
No 200
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=92.85 E-value=0.13 Score=53.37 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=39.7
Q ss_pred cccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007887 127 YLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT 176 (586)
Q Consensus 127 YL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts 176 (586)
|+.+.-+.=+.|..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 555445566889999999999999999999996444 4799999988743
No 201
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=92.61 E-value=0.43 Score=40.79 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=46.3
Q ss_pred hHHHHHHHhhCC-C--CccCHHHHHHHHHHHhC---CCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 24 DVKEAFNKYAEG-G--THMTAEQLRRFLLEVQG---DDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 24 el~~if~~~~~~-~--~~~~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
-|..+|.+|+.. + ..|+.++|+.||..+-. ....+...+.+++..+.. .+.+.+++++|..++.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~-------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL-------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC-------CCCCcCcHHHHHHHHH
Confidence 467889998843 2 38999999999998631 112455678888887542 1346899999998875
No 202
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=92.53 E-value=0.55 Score=40.30 Aligned_cols=65 Identities=12% Similarity=0.277 Sum_probs=48.0
Q ss_pred hhHHHHHHHhhC-CC-C-ccCHHHHHHHHHHHhCC---CCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 23 EDVKEAFNKYAE-GG-T-HMTAEQLRRFLLEVQGD---DGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 23 ~el~~if~~~~~-~~-~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
.++..+|++|+. ++ . .||.++|+..|..+.++ ...+...+.+|++.+-. .+.+.+++++|..++.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~-------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS-------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC-------CCCCCCCHHHHHHHHH
Confidence 467788999993 33 3 59999999999876432 12356788999988742 1346899999998876
No 203
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=92.44 E-value=0.37 Score=40.96 Aligned_cols=64 Identities=8% Similarity=0.195 Sum_probs=48.1
Q ss_pred hHHHHHHHhhCC---CCccCHHHHHHHHHHHhCCCCCC----hHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 24 DVKEAFNKYAEG---GTHMTAEQLRRFLLEVQGDDGGS----ISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 24 el~~if~~~~~~---~~~~~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
.|..+|.+|+.. ...|+.++|+..|...-++ ..+ .+++..++..+-. .+.+.+++++|..++.+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~-------d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT-------NQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC-------CCCCcCcHHHHHHHHHH
Confidence 577899999965 3589999999999754333 244 6788888887642 13468999999988763
No 204
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=92.32 E-value=0.14 Score=53.84 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+.|.++|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 34778999999999999999999996555 479999999874
No 205
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=92.30 E-value=0.14 Score=52.85 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=33.9
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 136 DCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
+-|..++.+|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996544 47999999888
No 206
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=92.21 E-value=0.21 Score=53.51 Aligned_cols=120 Identities=16% Similarity=0.207 Sum_probs=84.8
Q ss_pred EEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEc-CCc--------
Q 007887 458 TLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTV-PEL-------- 528 (586)
Q Consensus 458 ~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~-pel-------- 528 (586)
.|.+.|.+|++++......+ .|.||+++..-......+-||.+|+++-.|.|+|.|...+.- +.+
T Consensus 368 elel~ivrg~~~pvp~gp~h------ld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~f 441 (523)
T KOG3837|consen 368 ELELAIVRGQKNPVPGGPMH------LDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRRF 441 (523)
T ss_pred HhHHHHhhcccCCCCCCchh------HHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHHH
Confidence 46778888888765421111 356998887643323457789999999999999999988753 221
Q ss_pred --cEEEEEEEEccCC-CCCCccEEEEEECCCCCCc---ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 529 --ALLRIEVHEYDMS-EKDDFAGQTCLPVSELKPG---IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 529 --a~Lrf~V~D~d~~-~~ddflGq~~ipL~~L~~G---yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
--+.|.|+....+ .+|.++|.+.+.+.-|..- -..++|+| |...-++.|-|++.+
T Consensus 442 kr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 442 KRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 1388999987643 4578999999988877543 24678986 555556788888765
No 207
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=92.19 E-value=0.66 Score=39.93 Aligned_cols=64 Identities=9% Similarity=0.242 Sum_probs=46.7
Q ss_pred hHHHHHHHhhCCCCccCHHHHHHHHHHHhCC---CCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 24 DVKEAFNKYAEGGTHMTAEQLRRFLLEVQGD---DGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 24 el~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
-|..+|.+||++...|+..+|+..|+.+=.. ...+++.+.+|+...-. .+.+.++|.+|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~-------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD-------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC-------CCCCcCcHHHHHHHHH
Confidence 4678999999888899999999999765321 01245667777776532 2357899999998775
No 208
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=92.11 E-value=0.16 Score=53.62 Aligned_cols=49 Identities=24% Similarity=0.346 Sum_probs=39.4
Q ss_pred cccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 123 GHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 123 SHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.|.-| .-..-+.|..++..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 56553 22446889999999999999999999996555 479999998864
No 209
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=92.05 E-value=0.15 Score=53.24 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=35.6
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.=+.|..+|..|+..||..||+||+=-.| +.|||+|-.+|-
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 12 YAPEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CCccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 345789999999999999999999996555 479999988763
No 210
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=91.84 E-value=0.16 Score=52.60 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=34.6
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 136 DCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+-|..++..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996544 479999998875
No 211
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=91.71 E-value=2.5 Score=41.54 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=46.8
Q ss_pred ceecccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEccCCC-C---CCccEEEEEECC-----CCCCcceEEEcc
Q 007887 500 IMKKTKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYDMSE-K---DDFAGQTCLPVS-----ELKPGIRAVPLS 567 (586)
Q Consensus 500 ~k~kTkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d~~~-~---ddflGq~~ipL~-----~L~~GyR~ipL~ 567 (586)
...+|-+..-+-+|.|+|++...+... +-+-|+|.++...... + ...+|-+-+||- .|+.|-..++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 456777777778999999998877543 3478999997743221 1 245777777774 267777777775
No 212
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=91.62 E-value=0.7 Score=39.56 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=50.6
Q ss_pred hhHHHHHHHhhC--CCCccCHHHHHHHHHHHhCCCCCCh-HHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 23 EDVKEAFNKYAE--GGTHMTAEQLRRFLLEVQGDDGGSI-SDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 23 ~el~~if~~~~~--~~~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
..|..+|+.|+. +..+|+.++|+..|..+=++ .++. +++.++|...-. ...+.+++++|..++.+
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~-------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV-------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC-------CCCCCCcHHHHHHHHHH
Confidence 367889999997 45799999999999975344 3666 789999987642 13578999999988864
No 213
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=91.61 E-value=0.25 Score=49.59 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.-+.|.+||.+|+..|++.||+||+=-.| +.|||+|-.++.
T Consensus 10 ~~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 10 KYPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 345889999999999999999999995444 469999998864
No 214
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=91.30 E-value=0.19 Score=51.02 Aligned_cols=42 Identities=24% Similarity=0.370 Sum_probs=35.9
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
..-+-|.+|+..|+..|+..||+||.=-.| +.|||+|=.||.
T Consensus 19 ~~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 19 LAPENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 345778999999999999999999996555 479999988875
No 215
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=91.26 E-value=0.21 Score=52.55 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=36.3
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCccc
Confidence 456889999999999999999999996555 479999998864
No 216
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=91.01 E-value=2.5 Score=45.54 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=69.8
Q ss_pred HHHHHhcCCcEEEEEeecCC-CCCCceEeeccccccceeHHHHHHHHhhccccc--CCCCeEEEecC---CCCHHHHHHH
Q 007887 142 IIKALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSA--SPYPVVITLED---HLTPHLQAKV 215 (586)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvILSlE~---Hcs~~qQ~~m 215 (586)
...=|..|.|-+.|=|=-.+ +.++-.++||.- .++|.||++.|+++.=.. ..=-|||.+-. +=....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 45568889999988884322 223456667652 379999999999854221 23458887753 3234555567
Q ss_pred HHHHHHHhhcccccCCCcCCCCCCChhhhc-----cceeeeccCC
Q 007887 216 AKMLAETFGDMLFVPQCECLQEFPSPEELK-----YKIIISTKPP 255 (586)
Q Consensus 216 a~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (586)
.+.|+. |||+|. |+.... . -+.++|- .+|||-.+..
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 777777 999987 433332 2 3788888 6688887543
No 217
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=90.72 E-value=0.6 Score=35.35 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=40.3
Q ss_pred CccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 37 THMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 37 ~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
..|+.++|+.+| ..++....+.+++..|+..+-.+ +.+.+++++|..++.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~-------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD-------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS-------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC-------CCCCCCHHHHHHHHH
Confidence 579999999999 55665337889999999998632 357899999999885
No 218
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=90.28 E-value=0.38 Score=48.35 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccc
Q 007887 135 SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTL 174 (586)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (586)
-+-|..|+..|+..|++-||+|++=-.| +.+||+|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 4788999999999999999999996555 47999998876
No 219
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=89.96 E-value=0.35 Score=50.65 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=36.1
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 456889999999999999999999996555 479999988773
No 220
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=89.72 E-value=1.6 Score=38.01 Aligned_cols=56 Identities=21% Similarity=0.243 Sum_probs=36.7
Q ss_pred CCceEEEEEecCCCCc-ceecccccCCCCCCccCcEEEEEEEcCC---ccEEEEEEEEcc
Q 007887 484 PDFYCKVGIAGVPADQ-IMKKTKPKEDNWTPVWEQEFTFPLTVPE---LALLRIEVHEYD 539 (586)
Q Consensus 484 ~DPyV~V~i~g~p~D~-~k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~Lrf~V~D~d 539 (586)
.+.||++++......- ....|+.+.-+..+.|||.++|++...+ .|.|.|+||+..
T Consensus 32 ~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~ 91 (100)
T smart00142 32 SDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK 91 (100)
T ss_pred ceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence 4679999886422111 1224544433345899999999987544 489999999854
No 221
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=89.62 E-value=1.3 Score=37.74 Aligned_cols=65 Identities=11% Similarity=0.227 Sum_probs=48.7
Q ss_pred hhHHHHHHHhh-CC-CC-ccCHHHHHHHHHHHhCCC---CCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 23 EDVKEAFNKYA-EG-GT-HMTAEQLRRFLLEVQGDD---GGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 23 ~el~~if~~~~-~~-~~-~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
.+|.++|..|. .+ .. .|+.++|+..|+..-++. ..+.+.+.+|+..+..+ ..+.+++++|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHHH
Confidence 57899999996 54 35 499999999998643331 24678899999987521 246799999998775
No 222
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=89.49 E-value=0.41 Score=49.95 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=35.9
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
..-+.|..+|..|+..||.-||+||+=-.| +.|||+|=.++.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcce
Confidence 456789999999999999999999996555 479999988764
No 223
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=88.89 E-value=0.47 Score=50.13 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=36.5
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT 176 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts 176 (586)
..-+.|..++..|+..||.-||+||+=-.| +.|||+|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445889999999999999999999996555 4799999988743
No 224
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=88.38 E-value=0.29 Score=57.44 Aligned_cols=99 Identities=21% Similarity=0.325 Sum_probs=68.2
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEE-EEc--------CCcc
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFP-LTV--------PELA 529 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~-v~~--------pela 529 (586)
+++-|..|..|... +..+..|||+.|...+ ..+.|.++.+++||.||.+..|. +.. ...-
T Consensus 208 lR~yiyQar~L~a~------dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~pp 276 (1105)
T KOG1326|consen 208 LRSYIYQARALGAP------DKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPP 276 (1105)
T ss_pred hHHHHHHHHhhcCC------CcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCC
Confidence 34444455555432 3335579999999886 56789999999999999999885 221 1224
Q ss_pred EEEEEEEEccCCCCCCccEEEEEECCC-CC-CcceEEEccC
Q 007887 530 LLRIEVHEYDMSEKDDFAGQTCLPVSE-LK-PGIRAVPLSD 568 (586)
Q Consensus 530 ~Lrf~V~D~d~~~~ddflGq~~ipL~~-L~-~GyR~ipL~d 568 (586)
.+.|.|+|.|..+.++|.|.......- +. +--.++|++.
T Consensus 277 i~v~e~yd~dr~g~~ef~gr~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 277 IRVFEVYDLDRSGINEFKGRKKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred eEEEEeehhhhhchHHhhcccccceEEEecCCccceEEeec
Confidence 688999999999999999986543332 23 3356777753
No 225
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=86.79 E-value=0.91 Score=50.62 Aligned_cols=82 Identities=23% Similarity=0.362 Sum_probs=59.0
Q ss_pred cccCCCCCceEEEEEe-cCCCCcceecccccCCCCCCccCcE-EEEE-EEcCC-ccEEEEEEEEccCCCCCCccEEEEEE
Q 007887 478 FDLYSPPDFYCKVGIA-GVPADQIMKKTKPKEDNWTPVWEQE-FTFP-LTVPE-LALLRIEVHEYDMSEKDDFAGQTCLP 553 (586)
Q Consensus 478 ~d~~s~~DPyV~V~i~-g~p~D~~k~kTkvi~nn~NPvWNE~-f~F~-v~~pe-la~Lrf~V~D~d~~~~ddflGq~~ip 553 (586)
.+.++.+|||..+.-. +......-++|.++++++||.|-+. .... +...+ -+.+.+.+||++..++++++|++..+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 4667889999876543 3333334579999999999999753 2221 22222 35688999999988888999999999
Q ss_pred CCCCCC
Q 007887 554 VSELKP 559 (586)
Q Consensus 554 L~~L~~ 559 (586)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 988864
No 226
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=86.60 E-value=3.3 Score=35.22 Aligned_cols=65 Identities=9% Similarity=0.219 Sum_probs=47.7
Q ss_pred hhHHHHHHHhh-CC-CC-ccCHHHHHHHHHHH---hCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 23 EDVKEAFNKYA-EG-GT-HMTAEQLRRFLLEV---QGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 23 ~el~~if~~~~-~~-~~-~~~~~~~~~Fl~~~---Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
-+|.++|+.|. .+ .. .|+.++|+..|+.+ ......+.+++.++|+..-.+ +.+.+++++|..++.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-------~dG~v~f~eF~~li~ 78 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-------GDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHH
Confidence 36889999997 33 45 59999999999861 111235778899999876421 346899999998875
No 227
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=86.11 E-value=0.97 Score=48.31 Aligned_cols=41 Identities=24% Similarity=0.303 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+.|..||.+|+..|+.|||+|+-..+| +.+|+.|=-|..
T Consensus 81 ~penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 81 APENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CCcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 34678999999999999999999999887 578999977655
No 228
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=86.05 E-value=0.81 Score=46.35 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=33.6
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccc
Q 007887 134 SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRT 173 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~T 173 (586)
.-+-|.++|..|+..|+.+||+|+.=-.| +.+||+|=+|
T Consensus 18 ~PENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 18 APENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 34788999999999999999999997655 4799999873
No 229
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=86.03 E-value=0.99 Score=33.40 Aligned_cols=28 Identities=21% Similarity=0.474 Sum_probs=24.0
Q ss_pred hHHHHHHHhh---CCCCccCHHHHHHHHHHH
Q 007887 24 DVKEAFNKYA---EGGTHMTAEQLRRFLLEV 51 (586)
Q Consensus 24 el~~if~~~~---~~~~~~~~~~~~~Fl~~~ 51 (586)
-|..+|.+|| ++...|+..+|+..|+++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4678999999 556899999999999864
No 230
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=85.99 E-value=0.72 Score=46.59 Aligned_cols=39 Identities=26% Similarity=0.310 Sum_probs=33.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 135 SDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
-+-|..+|..|+..|+ -||+||+=-.| +.|||+|=.||.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678999999999999 89999997555 579999988764
No 231
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=85.98 E-value=0.77 Score=48.26 Aligned_cols=39 Identities=31% Similarity=0.498 Sum_probs=34.2
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 136 DCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+-|.++|..|+..|+..||+||+--.| +.+||+|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 678899999999999999999997555 479999998873
No 232
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=85.96 E-value=0.81 Score=35.99 Aligned_cols=60 Identities=23% Similarity=0.413 Sum_probs=41.8
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHH----HHHHHhhccccccccCCccCHHHHHHHH
Q 007887 25 VKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKV----VDQVLKTRHHLAKFTRHTLTLDDFHHYL 93 (586)
Q Consensus 25 l~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~i----i~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (586)
|.++|..|=.+ ...++.++|..++...... .+.+...+. +..+-. -+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~-------d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFREFDT-------DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHHHTT-------TSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhCC-------CCcCCCcHHHHhccC
Confidence 57889998544 5789999999999987653 234444444 444431 135789999999874
No 233
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=85.86 E-value=0.84 Score=49.06 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=34.4
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecc-cc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGR-TL 174 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~-Tl 174 (586)
..-+-|.++|..|+..|+.-||+|++=-.| +.|||.|=. +|
T Consensus 28 ~~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 28 QFPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 445788999999999999999999996555 479999995 44
No 234
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=85.74 E-value=0.99 Score=47.36 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=38.3
Q ss_pred eeeeccccccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecccccc
Q 007887 118 YFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTT 176 (586)
Q Consensus 118 YfI~SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts 176 (586)
||=|+|-.. ..|. ++...++.|...|++.||+||+=-.| +.|||||-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 777776521 1111 46789999999999999999995444 4699999998743
No 235
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=85.66 E-value=13 Score=35.30 Aligned_cols=125 Identities=18% Similarity=0.183 Sum_probs=81.3
Q ss_pred CcceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC------
Q 007887 454 PVKKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE------ 527 (586)
Q Consensus 454 p~~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe------ 527 (586)
|....|.|+|+.|+-...-. .+.-+..+..+.+.++- -.++++|+.+.-..+|.|+|.|-|++....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 34567999999997542110 00002233344454442 137889999999999999999999986442
Q ss_pred c-------cEEEEEEEEccCCCCCCccEEEEEECCC-CCCcce----EEEccCCCCC-cCCCeEEEEEEEE
Q 007887 528 L-------ALLRIEVHEYDMSEKDDFAGQTCLPVSE-LKPGIR----AVPLSDRKGE-MLNSVRLLMRFDF 585 (586)
Q Consensus 528 l-------a~Lrf~V~D~d~~~~ddflGq~~ipL~~-L~~GyR----~ipL~d~~g~-~~~~atL~v~~~f 585 (586)
. .-|.+.|--.|..+...++|+..+.-.. |..|+. .|.|....++ .++-+.|-++++.
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lEL 149 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLEL 149 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEe
Confidence 1 1366777666666656899998887654 456764 4677765555 3455678888875
No 236
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=85.59 E-value=3.6 Score=35.19 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=47.5
Q ss_pred hhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 22 PEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 22 r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
..++..+|..+-.+ ...|+.++|+.+|+.. ..+.+++.+|+..+..+ ..+.+++++|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~-------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID-------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC-------CCCCcCHHHHHHHHH
Confidence 45677888888654 5789999999999872 35777888888876421 346799999998776
No 237
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=85.38 E-value=2.5 Score=40.87 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=34.7
Q ss_pred eecccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEccCCCCC---CccEEEEEECCC----CCCcceEEEcc
Q 007887 501 MKKTKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYDMSEKD---DFAGQTCLPVSE----LKPGIRAVPLS 567 (586)
Q Consensus 501 k~kTkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d~~~~d---dflGq~~ipL~~----L~~GyR~ipL~ 567 (586)
...|.+...+-+|.|+|+|.+++..+ +-.-|.|++++.....+. ..+|-+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999999887643 346899999986532211 466666666654 22344455553
No 238
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=85.09 E-value=0.98 Score=48.44 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc
Q 007887 133 LSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
+.-+-|..++..|+..||..||+|++=-.| +.|||+|=.||.
T Consensus 13 ~aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 13 LAPENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 344778999999999999999999996544 479999998874
No 239
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=84.08 E-value=5 Score=29.56 Aligned_cols=60 Identities=20% Similarity=0.442 Sum_probs=44.8
Q ss_pred HHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHH
Q 007887 25 VKEAFNKYAEGG-THMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYL 93 (586)
Q Consensus 25 l~~if~~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (586)
+..+|..|-.+. ..++.++|...++... . ..+.+.+..++.++..+ ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~-------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD-------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHh
Confidence 567888887554 6799999999998643 3 35677788888887522 23579999998876
No 240
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=83.70 E-value=24 Score=32.09 Aligned_cols=114 Identities=17% Similarity=0.168 Sum_probs=67.3
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccC-CCCCCccCcEEEEEEEc---CC-----
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKE-DNWTPVWEQEFTFPLTV---PE----- 527 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~-nn~NPvWNE~f~F~v~~---pe----- 527 (586)
..+.|+|....++|. .+..|.|.......-....+|.... .+..-.|||+|.+.+.. ..
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 457777877777753 1123444443211110123343332 34567899999997652 11
Q ss_pred ccEEEEEEEEccCCCCCCccEEEEEECCCCCCc-----ceEEEccCCCCCcCCCeEEEEEEEE
Q 007887 528 LALLRIEVHEYDMSEKDDFAGQTCLPVSELKPG-----IRAVPLSDRKGEMLNSVRLLMRFDF 585 (586)
Q Consensus 528 la~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~G-----yR~ipL~d~~g~~~~~atL~v~~~f 585 (586)
--.+.|.|+.....++...+|.+.+.|.....- .+.++|... +-..|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 136889998874333336899999999987542 244566654 4456788887765
No 241
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=82.25 E-value=5.7 Score=33.88 Aligned_cols=66 Identities=11% Similarity=0.308 Sum_probs=49.2
Q ss_pred hhHHHHHHHhhC-C--CCccCHHHHHHHHHHHhCC---CCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 23 EDVKEAFNKYAE-G--GTHMTAEQLRRFLLEVQGD---DGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 23 ~el~~if~~~~~-~--~~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
.++...|..|.. + ...|+.++|+..|+...+. ...+.+++..+++.+..+ +.+.+++++|..++.+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~-------~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN-------RDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHHH
Confidence 578889999975 4 3789999999999863321 135678889999887421 3468999999988763
No 242
>PTZ00183 centrin; Provisional
Probab=82.24 E-value=5.6 Score=36.44 Aligned_cols=66 Identities=14% Similarity=0.326 Sum_probs=50.3
Q ss_pred ChhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 21 PPEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 21 ~r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
...++..+|..+-.+ ...++.++|..+|...+ . .++.+++..++..+..+ +.+.++++.|.+++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN-------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHHhc
Confidence 346788999988644 46799999999998654 3 47788889999887522 2356999999998874
No 243
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=81.67 E-value=3.3 Score=39.90 Aligned_cols=64 Identities=19% Similarity=0.254 Sum_probs=44.8
Q ss_pred ccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEccCC-----CCCCccEEEEEECCC-----CCCcceEEEcc
Q 007887 504 TKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYDMS-----EKDDFAGQTCLPVSE-----LKPGIRAVPLS 567 (586)
Q Consensus 504 Tkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d~~-----~~ddflGq~~ipL~~-----L~~GyR~ipL~ 567 (586)
|.++..+-+|.|+|++...+... +..-|.|++++.+.. .....+|-+.+||-. ++.|...+|+.
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~ 131 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVY 131 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEE
Confidence 34444447899999998887432 346799999986532 225678888888876 66777777775
No 244
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=81.52 E-value=6.7 Score=32.78 Aligned_cols=66 Identities=12% Similarity=0.222 Sum_probs=48.3
Q ss_pred hhhHHHHHHHhhC---CCCccCHHHHHHHHHHHhCCC---CCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 22 PEDVKEAFNKYAE---GGTHMTAEQLRRFLLEVQGDD---GGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 22 r~el~~if~~~~~---~~~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
..++..+|..|.. +...|+.++|..+|+..=+.. ..+...+..|+..+..+ +.+.+++++|+.++.
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~-------~~g~I~f~eF~~~~~ 78 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN-------KDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC-------CCCcCcHHHHHHHHH
Confidence 4578888999987 457899999999997521211 13567788888887521 246899999998876
No 245
>PTZ00184 calmodulin; Provisional
Probab=80.72 E-value=6.1 Score=35.57 Aligned_cols=66 Identities=15% Similarity=0.337 Sum_probs=47.2
Q ss_pred ChhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 21 PPEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 21 ~r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
....+..+|..|-.+ ...|+.++|..+|....- ..+.+.+..++.++... +.+.+++++|..++.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD-------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC-------CCCcCcHHHHHHHHhc
Confidence 345678888888644 467899999999986532 35667788887765421 2367999999998875
No 246
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=80.59 E-value=3.2 Score=35.62 Aligned_cols=63 Identities=17% Similarity=0.177 Sum_probs=38.5
Q ss_pred HHHHHHHhhCCCCccCHHHHHHHHHHHhCCCC---------CChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 25 VKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDG---------GSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 25 l~~if~~~~~~~~~~~~~~~~~Fl~~~Q~~~~---------~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
.+++|..+++....|+...|..||++..+-+. ..+..+++.++.-. ....++.+.|+.+|++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~---------~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ---------LSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT---------T-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC---------CCCccCHHHHHHHHHh
Confidence 57899999988899999999999998765331 11222233332210 2467999999999997
Q ss_pred C
Q 007887 96 S 96 (586)
Q Consensus 96 ~ 96 (586)
+
T Consensus 76 e 76 (90)
T PF09069_consen 76 E 76 (90)
T ss_dssp -
T ss_pred C
Confidence 3
No 247
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=79.44 E-value=0.42 Score=31.86 Aligned_cols=14 Identities=29% Similarity=0.510 Sum_probs=12.7
Q ss_pred cCCCCeEEEecCCC
Q 007887 194 ASPYPVVITLEDHL 207 (586)
Q Consensus 194 ~S~yPvILSlE~Hc 207 (586)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 47899999999999
No 248
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=78.47 E-value=9.8 Score=29.43 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=42.8
Q ss_pred HHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 26 KEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 26 ~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
..+|..+-.+ ...++.++|..+|+.. + .+.+.+.+++..+..+ ..+.+++++|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~-------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD-------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC-------CCCcCCHHHHHHHHH
Confidence 3577887544 4789999999999863 2 4677888998877532 246799999987664
No 249
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=76.56 E-value=2.8 Score=43.94 Aligned_cols=41 Identities=15% Similarity=-0.071 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhcCCc--EEEEEeecCCCCCCceEeeccccc
Q 007887 134 SSDCSDVPIIKALKRGVR--VVELDIWPNSTKDDVHVLHGRTLT 175 (586)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCR--cvElD~Wdg~~~~~piv~HG~Tlt 175 (586)
.-+.|.++|..|+..|+. -||+|++=-.| +.|||.|..+|.
T Consensus 13 ~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~ 55 (299)
T cd08603 13 FPDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLD 55 (299)
T ss_pred CCcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCcccc
Confidence 347899999999999995 69999996555 469999998873
No 250
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=72.06 E-value=9 Score=36.13 Aligned_cols=63 Identities=17% Similarity=0.315 Sum_probs=46.6
Q ss_pred HHHHHHHhh----CCCCccCHHHHHHHHHHHhCCC-CCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 25 VKEAFNKYA----EGGTHMTAEQLRRFLLEVQGDD-GGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 25 l~~if~~~~----~~~~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
|+.+|..|+ .+...|+-..|.+++++-+=-. .+|..++.-|+.++... ..+.|++++|...|-
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k-------~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK-------GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S-------S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC-------CCcccCHHHHHHHHH
Confidence 578999995 4567899999999999875422 37888999999997521 124599999998885
No 251
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=69.46 E-value=45 Score=35.74 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=68.6
Q ss_pred EEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCC-------ccEE
Q 007887 459 LKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE-------LALL 531 (586)
Q Consensus 459 L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe-------la~L 531 (586)
+.|.|+.|.+.+... + -...|...+.| ....|-.+..+-.|.||..+-|.+..-. -+-|
T Consensus 2 ivl~i~egr~F~~~~-~--------~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQRP-R--------HPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCCC-C--------ccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 467888898886420 0 12245555554 4456766777788999999999875322 2347
Q ss_pred EEEEEEcc-CCCCCCccEEEEEECCCC---CCc-----ceEEEccCC
Q 007887 532 RIEVHEYD-MSEKDDFAGQTCLPVSEL---KPG-----IRAVPLSDR 569 (586)
Q Consensus 532 rf~V~D~d-~~~~ddflGq~~ipL~~L---~~G-----yR~ipL~d~ 569 (586)
++.++..| ..+..+.+|...++|.+. ..| .+|.+|..-
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~ 114 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSS 114 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccc
Confidence 88888777 456688999999999999 555 689999876
No 252
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=69.32 E-value=12 Score=39.35 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=59.8
Q ss_pred Cccccceeeeccccccc---cCCC----C---CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeeccccc------
Q 007887 112 TAPLSHYFIYTGHNSYL---TGNQ----L---SSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVLHGRTLT------ 175 (586)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~G~Q----l---~g~SS~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------ 175 (586)
+.||++-.|=-|||+.- .+.- + .+..--.....-|..|+|-+.|-|=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 57999999999999852 2221 1 11222233567789999999888753222 346788876532
Q ss_pred cceeHHHHHHHHhhcccccCCCCeEEEec
Q 007887 176 TPVELMKCLKSIKEHAFSASPYPVVITLE 204 (586)
Q Consensus 176 s~i~f~dvi~aI~~~AF~~S~yPvILSlE 204 (586)
+..+|.|||+.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999998642222233777765
No 253
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=64.69 E-value=28 Score=36.48 Aligned_cols=94 Identities=26% Similarity=0.351 Sum_probs=59.1
Q ss_pred HHHHhcCCcEEEEEee---cCCCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCeEEEecCC----CCHHHHHHH
Q 007887 143 IKALKRGVRVVELDIW---PNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDH----LTPHLQAKV 215 (586)
Q Consensus 143 ~~aL~~GCRcvElD~W---dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~H----cs~~qQ~~m 215 (586)
..-|..|.|..-|=+= +++| .+--|+||-+.| ++..+|+.-|++. ++-.==.|+=||.- -...-=..+
T Consensus 73 ~~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~--~~v~~vL~ev~~F--l~~h~eEVViL~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 73 REQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFST--YPVLEVLNEVRQF--LSEHPEEVVILEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHHhhcceEEEEEeeeccCCCC-cceEEEeecccc--ccHHHHHHHHHHH--HHhCCCEEEEEeccchhccCccHHHHH
Confidence 4457889999877775 2233 235899996554 4557888888874 43222222225532 255666778
Q ss_pred HHHHHHHhhcccccCCCcCCCCCCChhhh
Q 007887 216 AKMLAETFGDMLFVPQCECLQEFPSPEEL 244 (586)
Q Consensus 216 a~~l~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (586)
..+++++||++|+.+. ...-|+.++|
T Consensus 148 ~~~ik~~~g~~l~~d~---~~~~~~lr~L 173 (306)
T KOG4306|consen 148 VLVIKQGFGDILCDDS---LFEKPTLREL 173 (306)
T ss_pred HHHHHHHhcccccChh---hcccccHHHH
Confidence 8889999999999432 2333455554
No 254
>PTZ00183 centrin; Provisional
Probab=64.27 E-value=21 Score=32.48 Aligned_cols=65 Identities=11% Similarity=0.270 Sum_probs=46.3
Q ss_pred ChhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 21 PPEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 21 ~r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
...++..+|..+-.+ ...|+.++|..+|+... . ..+...+..++..+..+ +.+.+++.+|...+.
T Consensus 15 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~~-------~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 15 QKKEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDKD-------GSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCcEeHHHHHHHHH
Confidence 345667778877644 46799999999998653 2 24566777887776421 346799999998775
No 255
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=63.87 E-value=36 Score=40.42 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=56.3
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEE--EEe-cCCCCcceecccccCCCCCCccCcEEEEEEEcCC---ccE
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKV--GIA-GVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPE---LAL 530 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V--~i~-g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pe---la~ 530 (586)
+.++|+++++.....+. ..|-+|.| .+. |...=+..+.|.-+...-+|.||+.++|+|...+ .|.
T Consensus 343 ~~frI~l~~is~~n~~~---------t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~Ar 413 (1076)
T KOG0904|consen 343 RPFRIKLVGISKVNLPE---------TVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMAR 413 (1076)
T ss_pred CceEEEEeeccccCCCc---------ccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhh
Confidence 34788888776553321 12334444 443 3111122244544444568999999999987544 577
Q ss_pred EEEEEEEcc----------------CCCCCCccEEEEEECC----CCCCcceEE
Q 007887 531 LRIEVHEYD----------------MSEKDDFAGQTCLPVS----ELKPGIRAV 564 (586)
Q Consensus 531 Lrf~V~D~d----------------~~~~ddflGq~~ipL~----~L~~GyR~i 564 (586)
|.|.|+.-- .....-.+|++.+-|- .|++|-+.+
T Consensus 414 Lc~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~L 467 (1076)
T KOG0904|consen 414 LCLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVL 467 (1076)
T ss_pred heeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEE
Confidence 777776531 1122346788776654 467886544
No 256
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=61.15 E-value=9.7 Score=45.01 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=70.3
Q ss_pred CCceEEEEEecCCCCcceecccccCCC-CCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcc-
Q 007887 484 PDFYCKVGIAGVPADQIMKKTKPKEDN-WTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI- 561 (586)
Q Consensus 484 ~DPyV~V~i~g~p~D~~k~kTkvi~nn-~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy- 561 (586)
.++|+.+.+.. ..-.+|..+.+. -+|.|.+.|+..+... .+.+.|.|.+.+..+...++|.+.+|+-.+..|-
T Consensus 138 ~e~Ylt~~l~~----~~~~~t~~~~~f~e~s~~~f~~~~~~~h~-~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHK----ARYRRTHVIYEFLENSRWSFSFDIGFAHK-AGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeech----hhhhchhhhhcccccchhhhhcccccccc-ccEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 47799988875 234577777777 5899999887666554 4689999998877665678899999988887763
Q ss_pred --eEEEccCCCCCcCCC-eEEEEEEEE
Q 007887 562 --RAVPLSDRKGEMLNS-VRLLMRFDF 585 (586)
Q Consensus 562 --R~ipL~d~~g~~~~~-atL~v~~~f 585 (586)
.+.++.+.++.+..+ +++.+++.|
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~ 239 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGF 239 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEee
Confidence 467888878877643 455554544
No 257
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.78 E-value=9.5 Score=43.52 Aligned_cols=84 Identities=23% Similarity=0.324 Sum_probs=55.6
Q ss_pred CCceEEEEEecCCCCc-ceecccccCCCCCCccCcEEEEEEEcCCc---cEEEEEEEEccCCCCCCccEEEEEECCC---
Q 007887 484 PDFYCKVGIAGVPADQ-IMKKTKPKEDNWTPVWEQEFTFPLTVPEL---ALLRIEVHEYDMSEKDDFAGQTCLPVSE--- 556 (586)
Q Consensus 484 ~DPyV~V~i~g~p~D~-~k~kTkvi~nn~NPvWNE~f~F~v~~pel---a~Lrf~V~D~d~~~~ddflGq~~ipL~~--- 556 (586)
+|.||+..+...+... ..-+|..+.-.---.|||-+++.+..+++ |.+.+++||........|+|+.++.+..
T Consensus 47 ~~l~~~c~v~~~~~~~~lP~~ts~~~~~~~~~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~~ 126 (843)
T KOG0906|consen 47 SDLYVTCQVFAEGKPFALPVRTSYKAFSKRINWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKYG 126 (843)
T ss_pred hhhhheeeeeccCCcccCCccccccccCCccchhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeecccc
Confidence 5677777665432111 01123322111112399999999998887 6899999998766677899999887653
Q ss_pred -CCCcceEEEcc
Q 007887 557 -LKPGIRAVPLS 567 (586)
Q Consensus 557 -L~~GyR~ipL~ 567 (586)
+++|..-++|.
T Consensus 127 ~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 127 MLKQGMQDLKLW 138 (843)
T ss_pred hHhhhhhhcccc
Confidence 57888877774
No 258
>PTZ00184 calmodulin; Provisional
Probab=58.78 E-value=39 Score=30.16 Aligned_cols=65 Identities=17% Similarity=0.361 Sum_probs=45.8
Q ss_pred hhhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 22 PEDVKEAFNKYAE-GGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 22 r~el~~if~~~~~-~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
.+++...|..+-. +...++.++|..+|... +. ..+.+.+..++..+..+ ..+.++++.|..+|..
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQ-NPTEAELQDMINEVDAD-------GNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCcC-------CCCcCcHHHHHHHHHH
Confidence 3566677877743 45789999999999654 33 24566778888776421 2357999999998864
No 259
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=55.93 E-value=16 Score=24.35 Aligned_cols=27 Identities=19% Similarity=0.519 Sum_probs=22.7
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007887 24 DVKEAFNKYAEG-GTHMTAEQLRRFLLE 50 (586)
Q Consensus 24 el~~if~~~~~~-~~~~~~~~~~~Fl~~ 50 (586)
||..+|+.|=.+ ...++.++|...|++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 788999999654 578999999999864
No 260
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=54.89 E-value=55 Score=31.60 Aligned_cols=99 Identities=16% Similarity=0.246 Sum_probs=63.3
Q ss_pred hhhHHHHHHHhhCCCC--ccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc-----
Q 007887 22 PEDVKEAFNKYAEGGT--HMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF----- 94 (586)
Q Consensus 22 r~el~~if~~~~~~~~--~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~----- 94 (586)
|.++..+|.++.+... .++++.|.+-+.+.=+....+.+.+.++|...-. ......+|+..|..||.
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~------~k~~~~iT~~Df~~F~A~FGP~ 91 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILT------PKNTNVITIPDFYKFLARFGPE 91 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--------SS-SEEEHHHHHHHHHHSSSG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHc------CCCCceeeHHHHHHHHHHhCCc
Confidence 5688899999987654 7888888887766533334577888888887641 11235788888888875
Q ss_pred ------------CC-CCCCCC--CCCCCCcccCccccceeeecccccc
Q 007887 95 ------------SS-DLNPPI--NYDQVHQDMTAPLSHYFIYTGHNSY 127 (586)
Q Consensus 95 ------------S~-~~n~~~--~~~~v~qDM~~PLs~YfI~SSHNTY 127 (586)
++ ..+.-+ +| ...+-|+++++-||=+.=||=.
T Consensus 92 ~tim~KI~~lL~~s~~~~~wl~~~P-d~~~~~~~~i~g~f~~t~~NC~ 138 (181)
T PF11422_consen 92 ETIMEKIHSLLCSSNNDGQWLYFDP-DAEKNFDNSISGYFDNTEPNCF 138 (181)
T ss_dssp GGHHHHHHHHHHHHHTTTS-B-SSS-STTTTTCCS-EEEEESSSTTEE
T ss_pred hhHHHHHHHHHHhhccCCcceeeCc-hhhcccCcccceeeccCCCceE
Confidence 11 111222 22 2456788899999988888743
No 261
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=53.86 E-value=16 Score=24.26 Aligned_cols=27 Identities=26% Similarity=0.485 Sum_probs=21.9
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007887 24 DVKEAFNKYAEG-GTHMTAEQLRRFLLE 50 (586)
Q Consensus 24 el~~if~~~~~~-~~~~~~~~~~~Fl~~ 50 (586)
|+..+|..|-.+ ...|+.++|+.+|+.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999755 578999999999973
No 262
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=53.59 E-value=53 Score=31.89 Aligned_cols=54 Identities=20% Similarity=0.186 Sum_probs=36.4
Q ss_pred eecccccCCCCCCccCcEEEEEEEcC--CccEEEEEEEEccCCCC------CCccEEEEEEC
Q 007887 501 MKKTKPKEDNWTPVWEQEFTFPLTVP--ELALLRIEVHEYDMSEK------DDFAGQTCLPV 554 (586)
Q Consensus 501 k~kTkvi~nn~NPvWNE~f~F~v~~p--ela~Lrf~V~D~d~~~~------ddflGq~~ipL 554 (586)
...|.+...|-+|.|+|++..++..+ +..-|+|++++-+...+ ...+|-+.+||
T Consensus 55 ~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL 116 (179)
T cd08696 55 EAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPL 116 (179)
T ss_pred eEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEee
Confidence 45677777788999999888876533 44679999998543221 23456555555
No 263
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=53.20 E-value=34 Score=35.56 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=51.7
Q ss_pred CCCCCCCCChHHHHHHHhc----C-CcEEEEEeecCCCCCCceEeec-ccc-ccceeHHHHHHHHhhcccccCCCCeEEE
Q 007887 130 GNQLSSDCSDVPIIKALKR----G-VRVVELDIWPNSTKDDVHVLHG-RTL-TTPVELMKCLKSIKEHAFSASPYPVVIT 202 (586)
Q Consensus 130 G~Ql~g~SS~e~Y~~aL~~----G-CRcvElD~Wdg~~~~~piv~HG-~Tl-ts~i~f~dvi~aI~~~AF~~S~yPvILS 202 (586)
+=|+.| ++.+.|.++..+ | +..|||.|.- |..-|| ..+ ...=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c------P~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC------PNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC------CCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 345655 468899887754 8 9999999863 222353 222 22335689999999864 7999987
Q ss_pred ecCCCCHHHHHHHHHHHHH
Q 007887 203 LEDHLTPHLQAKVAKMLAE 221 (586)
Q Consensus 203 lE~Hcs~~qQ~~ma~~l~~ 221 (586)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 753 33455566776655
No 264
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=52.73 E-value=8.8 Score=31.31 Aligned_cols=34 Identities=41% Similarity=0.489 Sum_probs=28.3
Q ss_pred CCChhhHHHHHHHhhCCCCccCHHHHHHHHHHHh
Q 007887 19 AGPPEDVKEAFNKYAEGGTHMTAEQLRRFLLEVQ 52 (586)
Q Consensus 19 ~~~r~el~~if~~~~~~~~~~~~~~~~~Fl~~~Q 52 (586)
..+.++|.+-|+.+|+++.++|.++|++-|.-+|
T Consensus 2 ~~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 2 QDSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp SSTCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 3566899999999999999999999999876443
No 265
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=52.48 E-value=30 Score=26.58 Aligned_cols=46 Identities=13% Similarity=0.209 Sum_probs=32.9
Q ss_pred cCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHH
Q 007887 39 MTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYL 93 (586)
Q Consensus 39 ~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L 93 (586)
|+..+.++||+...= .++.+.|..||++.... +.+.|..++|..|.
T Consensus 2 msf~Evk~lLk~~NI--~~~~~yA~~LFq~~D~s-------~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI--EMDDEYARQLFQECDKS-------QSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-SS-------SSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc--CcCHHHHHHHHHHhccc-------CCCCccHHHHHHHH
Confidence 788999999996554 36789999999887521 34678888888875
No 266
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=51.37 E-value=38 Score=33.05 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=41.9
Q ss_pred eecccccCCCCCCccCcEEEEEEEc--CCccEEEEEEEEccCC--C-------CCCccEEEEEECCC----CCCcceEEE
Q 007887 501 MKKTKPKEDNWTPVWEQEFTFPLTV--PELALLRIEVHEYDMS--E-------KDDFAGQTCLPVSE----LKPGIRAVP 565 (586)
Q Consensus 501 k~kTkvi~nn~NPvWNE~f~F~v~~--pela~Lrf~V~D~d~~--~-------~ddflGq~~ipL~~----L~~GyR~ip 565 (586)
...|.+...+-+|.|+|++...+.. .+..-|+|+.++.+.. . ....+|-+.+||-. |+.|...+|
T Consensus 57 ~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~Lp 136 (185)
T cd08697 57 SAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTPP 136 (185)
T ss_pred EEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEeee
Confidence 4567777778899999988877643 3446799999986521 1 12346666666654 444544444
Q ss_pred c
Q 007887 566 L 566 (586)
Q Consensus 566 L 566 (586)
.
T Consensus 137 V 137 (185)
T cd08697 137 V 137 (185)
T ss_pred E
Confidence 3
No 267
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=48.93 E-value=63 Score=29.85 Aligned_cols=65 Identities=15% Similarity=0.311 Sum_probs=51.8
Q ss_pred hhhHHHHHHHhhC-CCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 22 PEDVKEAFNKYAE-GGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 22 r~el~~if~~~~~-~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
..++..+|..+-. +...++..+|...|+.--.. .+.++...+++++..+ +.+.++++.|...|..
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d-------g~g~I~~~eF~~l~~~ 72 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD-------GDGTIDFEEFLDLMEK 72 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHHHh
Confidence 3678889999854 45789999999999986654 6788899999987532 3468999999999875
No 268
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=48.27 E-value=48 Score=29.37 Aligned_cols=80 Identities=16% Similarity=0.199 Sum_probs=44.9
Q ss_pred eecccccCCCCCCccCcEEEEEEEcCCc-------cEEEEEEEEccCCCCCCccEEEEEECCCCC--Cc---ceEEEccC
Q 007887 501 MKKTKPKEDNWTPVWEQEFTFPLTVPEL-------ALLRIEVHEYDMSEKDDFAGQTCLPVSELK--PG---IRAVPLSD 568 (586)
Q Consensus 501 k~kTkvi~nn~NPvWNE~f~F~v~~pel-------a~Lrf~V~D~d~~~~ddflGq~~ipL~~L~--~G---yR~ipL~d 568 (586)
...|.++. +.+|.+|-+-.|.|...++ ..+++.++..- ..+-..+|.+.+++..+- .| +-.+.|.+
T Consensus 12 tq~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g 89 (107)
T PF11618_consen 12 TQTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVG 89 (107)
T ss_dssp -EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-B
T ss_pred eeccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEec
Confidence 34566665 7899999999999986653 46888888754 233578999999999874 33 44678888
Q ss_pred CCCCcCCCeEEEEEEE
Q 007887 569 RKGEMLNSVRLLMRFD 584 (586)
Q Consensus 569 ~~g~~~~~atL~v~~~ 584 (586)
..|+ ..++|-.+++
T Consensus 90 ~~~~--~~g~l~y~~r 103 (107)
T PF11618_consen 90 VSGE--DFGTLEYWIR 103 (107)
T ss_dssp SSS---TSEEEEEEEE
T ss_pred cCCC--eEEEEEEEEE
Confidence 8888 4457776654
No 269
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=47.59 E-value=61 Score=29.94 Aligned_cols=65 Identities=15% Similarity=0.305 Sum_probs=49.6
Q ss_pred hhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 22 PEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 22 r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
..||.+.|+-|-.+ ..++|+++|+++|...=. ..+.+.+..+|+.... ...+.+++++|...+..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~--~~~~~e~~~mi~~~d~-------d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLGE--KLTDEECKEMIREVDV-------DGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC--cCCHHHHHHHHHhcCC-------CCCCeEeHHHHHHHHhc
Confidence 45999999999754 578999999999997543 3678888888887542 12456789999988763
No 270
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=42.67 E-value=37 Score=20.30 Aligned_cols=27 Identities=22% Similarity=0.475 Sum_probs=21.2
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHH
Q 007887 24 DVKEAFNKYAEG-GTHMTAEQLRRFLLE 50 (586)
Q Consensus 24 el~~if~~~~~~-~~~~~~~~~~~Fl~~ 50 (586)
|+..+|..+-.+ ...++.++|..+++.
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567888888654 467999999999864
No 271
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=40.72 E-value=93 Score=29.68 Aligned_cols=67 Identities=19% Similarity=0.350 Sum_probs=51.6
Q ss_pred CChhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcC
Q 007887 20 GPPEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFS 95 (586)
Q Consensus 20 ~~r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S 95 (586)
.++.||...|+-|=-+ ..+++..+|++-|.. =++ ..+.+++..++..+..+ ..+.++++.|...++.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~-lge-~~~deev~~ll~~~d~d-------~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKS-LGE-RLSDEEVEKLLKEYDED-------GDGEIDYEEFKKLIKD 156 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHh-hcc-cCCHHHHHHHHHhcCCC-------CCceEeHHHHHHHHhc
Confidence 4578999999999644 578999999999984 333 47888899999887532 3478999999987764
No 272
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=40.14 E-value=1e+02 Score=29.47 Aligned_cols=61 Identities=16% Similarity=0.298 Sum_probs=45.3
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 24 DVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 24 el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
++++.|..+..+ +..|+.++|...|+.-+.. .+.+.+..|++.+- . +...+++..|+..|-
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d-------~-~~~~idf~~Fl~~ms 82 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEID-------A-GNETVDFPEFLTVMS 82 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhcc-------C-CCCccCHHHHHHHHH
Confidence 455556666543 5789999999999966653 67778888888753 1 347899999998884
No 273
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=36.42 E-value=1.3e+02 Score=30.96 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=57.2
Q ss_pred cCCCCCCCCChHHHHHHH----hcCCcEEEEEeecCCCCCCceEeeccc-cccceeHHHHHHHHhhcccccCCCCeEEEe
Q 007887 129 TGNQLSSDCSDVPIIKAL----KRGVRVVELDIWPNSTKDDVHVLHGRT-LTTPVELMKCLKSIKEHAFSASPYPVVITL 203 (586)
Q Consensus 129 ~G~Ql~g~SS~e~Y~~aL----~~GCRcvElD~Wdg~~~~~piv~HG~T-lts~i~f~dvi~aI~~~AF~~S~yPvILSl 203 (586)
++=|+.|. +.+.|.++. ..|+..|||+|-- |. .-.|.. +...=..++++++|++.. +.||++=|
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~c-P~-----~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSC-PN-----VGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCC-CC-----CCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 44566663 555554443 4599999999964 21 112333 223335678999999754 79999988
Q ss_pred cCCCCHHHHHHHHHHHHHHhhccccc
Q 007887 204 EDHLTPHLQAKVAKMLAETFGDMLFV 229 (586)
Q Consensus 204 E~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (586)
-..-+.+.=..+|+.+.+.=-|.|..
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 87777767777788776642254443
No 274
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=33.50 E-value=1.8e+02 Score=26.13 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=43.2
Q ss_pred ChhhHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHc
Q 007887 21 PPEDVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLF 94 (586)
Q Consensus 21 ~r~el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~ 94 (586)
.+.+|...|..+=.+ +..|+.++|..++ . . .....+..+|+++-. .+.+.||+++|...|+
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~-------n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDL-------DKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCC-------CCCCCCCHHHHHHHHh
Confidence 346678889998654 5789999999987 1 1 223445667777641 1357899999999995
No 275
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=32.98 E-value=31 Score=26.79 Aligned_cols=29 Identities=28% Similarity=0.193 Sum_probs=21.5
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhcCCcEEE
Q 007887 122 TGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVE 154 (586)
Q Consensus 122 SSHNTYL~G~Ql~g~SS~e~Y~~aL~~GCRcvE 154 (586)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448999987 45566899999999998884
No 276
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=32.41 E-value=1.3e+02 Score=28.55 Aligned_cols=67 Identities=16% Similarity=0.353 Sum_probs=47.2
Q ss_pred CceEEEEEecCCCCcceecccccC--CCCCCccCcEEEEEEEc-CCccEEEEEEEEccCCCCCCccEEEEEECCCCC
Q 007887 485 DFYCKVGIAGVPADQIMKKTKPKE--DNWTPVWEQEFTFPLTV-PELALLRIEVHEYDMSEKDDFAGQTCLPVSELK 558 (586)
Q Consensus 485 DPyV~V~i~g~p~D~~k~kTkvi~--nn~NPvWNE~f~F~v~~-pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~ 558 (586)
..||+|.+.+ +.-.+|+... .+|.=.+||.|.+++.. | ..|.+.||.... ..+..|+++.+|+-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~P--esi~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWP--ESIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCC--CEEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 3488888765 3334555433 34666789999998863 4 468899998775 55889999999976543
No 277
>PTZ00466 actin-like protein; Provisional
Probab=31.62 E-value=52 Score=35.65 Aligned_cols=45 Identities=22% Similarity=0.302 Sum_probs=38.2
Q ss_pred HHHHHHHhhcccc-----cCCCCeEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007887 181 MKCLKSIKEHAFS-----ASPYPVVITLEDHLTPHLQAKVAKMLAETFGD 225 (586)
Q Consensus 181 ~dvi~aI~~~AF~-----~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (586)
.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 86 wd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 86 WNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred HHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 5778888888873 36899999977888899999999999999985
No 278
>PRK09071 hypothetical protein; Validated
Probab=31.41 E-value=34 Score=36.34 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=33.8
Q ss_pred hHHHHHHHhcCCcEE----EEE--eecCCCC---------------CCceEeecc-ccccce-eHHHHHHHHh
Q 007887 139 DVPIIKALKRGVRVV----ELD--IWPNSTK---------------DDVHVLHGR-TLTTPV-ELMKCLKSIK 188 (586)
Q Consensus 139 ~e~Y~~aL~~GCRcv----ElD--~Wdg~~~---------------~~piv~HG~-Tlts~i-~f~dvi~aI~ 188 (586)
+.++.+|++.-|.-+ .|| |++|.++ +-||+-||. ..||+. .-.||++++.
T Consensus 60 i~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDvLeaLG 132 (323)
T PRK09071 60 LAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQLLEALG 132 (323)
T ss_pred HHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHHHHHCC
Confidence 446788887665433 366 6888663 457999997 456664 3788888874
No 279
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=31.37 E-value=1.3e+02 Score=29.30 Aligned_cols=83 Identities=18% Similarity=0.338 Sum_probs=53.0
Q ss_pred eeecCCCCCCCCChh--hHHHHHHHhhCCC-CccCHHHHHHHHHHHhCCCCCC--hHHHHHHHHHHHhhccccccccCCc
Q 007887 9 CFTRKFRVTEAGPPE--DVKEAFNKYAEGG-THMTAEQLRRFLLEVQGDDGGS--ISDAEKVVDQVLKTRHHLAKFTRHT 83 (586)
Q Consensus 9 ~~~~~~~~~~~~~r~--el~~if~~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~--~~~~~~ii~~~~~~~~~~~~~~~~~ 83 (586)
.|+|.+.+-.....+ =+...|+-|-.++ ..|+.++|...|..-=++. .+ .+...+|+++.-.+.. .-..+.
T Consensus 88 ~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~-~~~~~e~~~~i~d~t~~e~D---~d~DG~ 163 (187)
T KOG0034|consen 88 EFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGEN-DDMSDEQLEDIVDKTFEEAD---TDGDGK 163 (187)
T ss_pred HHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccC-CcchHHHHHHHHHHHHHHhC---CCCCCc
Confidence 344444443333333 4677899997654 6699999999988766543 23 5666666665432211 113478
Q ss_pred cCHHHHHHHHcC
Q 007887 84 LTLDDFHHYLFS 95 (586)
Q Consensus 84 l~~~~F~~~L~S 95 (586)
|++++|.+++.+
T Consensus 164 IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 164 ISFEEFCKVVEK 175 (187)
T ss_pred CcHHHHHHHHHc
Confidence 999999999986
No 280
>PTZ00452 actin; Provisional
Probab=30.31 E-value=55 Score=35.36 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=37.8
Q ss_pred HHHHHHHhhccccc------CCCCeEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007887 181 MKCLKSIKEHAFSA------SPYPVVITLEDHLTPHLQAKVAKMLAETFGD 225 (586)
Q Consensus 181 ~dvi~aI~~~AF~~------S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (586)
.|.++.|=+|+|.. +++||+++=-..++..++++||++|=|.|+-
T Consensus 79 wd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 79 WDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred HHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 67788888888742 5899999955777899999999999999985
No 281
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=29.21 E-value=48 Score=31.11 Aligned_cols=66 Identities=24% Similarity=0.337 Sum_probs=45.4
Q ss_pred CCCCCChHHHHHHHhcCCc--EEEEEeecCC-------------CCCCceEeeccccc-cceeHHHHHHHHhhcccccCC
Q 007887 133 LSSDCSDVPIIKALKRGVR--VVELDIWPNS-------------TKDDVHVLHGRTLT-TPVELMKCLKSIKEHAFSASP 196 (586)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--cvElD~Wdg~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (586)
+.|.-|.+.+.+.|+.-|. -++++|.-.. ++-..||.--..+| ++|..+|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 6788999999888877555 5688885211 01123555545555 779999999887 5
Q ss_pred CCeEEEecCCCCH
Q 007887 197 YPVVITLEDHLTP 209 (586)
Q Consensus 197 yPvILSlE~Hcs~ 209 (586)
.|+ +|+|.|-
T Consensus 94 ~P~---VEVHiSN 103 (146)
T PRK05395 94 IPV---IEVHLSN 103 (146)
T ss_pred CCE---EEEecCC
Confidence 675 5899874
No 282
>PTZ00281 actin; Provisional
Probab=28.95 E-value=56 Score=35.21 Aligned_cols=47 Identities=21% Similarity=0.255 Sum_probs=38.9
Q ss_pred HHHHHHHHhhcccc------cCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcc
Q 007887 180 LMKCLKSIKEHAFS------ASPYPVVITLEDHLTPHLQAKVAKMLAETFGDM 226 (586)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~ 226 (586)
=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.|+--
T Consensus 79 dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp 131 (376)
T PTZ00281 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131 (376)
T ss_pred CHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCc
Confidence 36777788888874 368999999777888999999999999999853
No 283
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=28.82 E-value=1.8e+02 Score=27.38 Aligned_cols=120 Identities=17% Similarity=0.167 Sum_probs=56.2
Q ss_pred eEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCC--cceecccccCCC-CC-CccCcEEEEEEE---cCCcc
Q 007887 457 KTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPAD--QIMKKTKPKEDN-WT-PVWEQEFTFPLT---VPELA 529 (586)
Q Consensus 457 ~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D--~~k~kTkvi~nn-~N-PvWNE~f~F~v~---~pela 529 (586)
..|+|+|-+.. +. |...-.|||+.|++....+- +..+.|.+.... .| =.||.+.+.+.. .|+.+
T Consensus 13 t~l~v~Iekig-lk--------da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~Ga 83 (147)
T PF14186_consen 13 TYLSVFIEKIG-LK--------DASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLPKGA 83 (147)
T ss_dssp -EEEEEEEEEE--T--------TGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-TT-
T ss_pred ceEEEEEEEEE-EC--------ChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCCCce
Confidence 45777776543 31 12233689999998753322 123445554211 22 335655555443 35557
Q ss_pred EEEEEEEEccCCC-CCCccEEEEEECCCCCCcceEEEcc----CCCCCc---CCCeEEEEEEEE
Q 007887 530 LLRIEVHEYDMSE-KDDFAGQTCLPVSELKPGIRAVPLS----DRKGEM---LNSVRLLMRFDF 585 (586)
Q Consensus 530 ~Lrf~V~D~d~~~-~ddflGq~~ipL~~L~~GyR~ipL~----d~~g~~---~~~atL~v~~~f 585 (586)
.|.|+++++-... +-...+++.++++.+++|--.+.|+ |...+. +..-.|.+|+.+
T Consensus 84 ai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely~KPtD~~rkkl~llt~k~~yl~l~~ 147 (147)
T PF14186_consen 84 AIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELYKKPTDFKRKKLKLLTKKPLYLHLTL 147 (147)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--EESS--TT--S--BS-SSS--EEEEE
T ss_pred EEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehhcCCcChhHhhhhhccCCCccEEEeC
Confidence 7889998875332 2345789999999999995445553 433333 223346666543
No 284
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=27.33 E-value=22 Score=24.96 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=6.7
Q ss_pred HHHHHhcCCcEEEEEeecC
Q 007887 142 IIKALKRGVRVVELDIWPN 160 (586)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg 160 (586)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788999999985 5554
No 285
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=26.86 E-value=2.7e+02 Score=29.51 Aligned_cols=77 Identities=18% Similarity=0.261 Sum_probs=46.8
Q ss_pred ceEEEEEEEecccCCCCCcccccccCCCCCceEEEEEecCCCCcceecccccCCCCCCccCcEEEEEEEcCCccEEEEEE
Q 007887 456 KKTLKIKVYMGDGWHLDFKQTHFDLYSPPDFYCKVGIAGVPADQIMKKTKPKEDNWTPVWEQEFTFPLTVPELALLRIEV 535 (586)
Q Consensus 456 ~~~L~V~Visgq~L~~~~~~~~~d~~s~~DPyV~V~i~g~p~D~~k~kTkvi~nn~NPvWNE~f~F~v~~pela~Lrf~V 535 (586)
.+.|-+.++.|++|....+.. +-..+.|+.++..- ..+.||.+.....-=.|.|+|+.++... ..+.+-|
T Consensus 50 tGiL~~H~~~GRGLr~~p~~k----glt~~~ycVle~dr----qh~aRt~vrs~~~~f~w~e~F~~Dvv~~--~vl~~lv 119 (442)
T KOG1452|consen 50 TGILYFHAYNGRGLRMTPQQK----GLTVCFYCVLEPDR----QHPARTRVRSSGPGFAWAEDFKHDVVNI--EVLHYLV 119 (442)
T ss_pred cceEEEEEecccccccChhcc----Cceeeeeeeeeecc----cCccccccccCCCCccchhhceeecccc--eeeeEEE
Confidence 356889999999996542211 12245677666432 2334454443333446899999887643 3577888
Q ss_pred EEccCCC
Q 007887 536 HEYDMSE 542 (586)
Q Consensus 536 ~D~d~~~ 542 (586)
|.|+...
T Consensus 120 ySW~pq~ 126 (442)
T KOG1452|consen 120 YSWPPQR 126 (442)
T ss_pred eecCchh
Confidence 8887543
No 286
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=26.80 E-value=1.6e+02 Score=33.04 Aligned_cols=71 Identities=17% Similarity=0.358 Sum_probs=44.3
Q ss_pred CCCCCCChhhHHHHHHHhhC----CCCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHH
Q 007887 15 RVTEAGPPEDVKEAFNKYAE----GGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFH 90 (586)
Q Consensus 15 ~~~~~~~r~el~~if~~~~~----~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~ 90 (586)
+.++...++||..+|-+|++ ++..||.++|.+|.---=.+....++ ...|.+...+ ..+.+.+++.+|.
T Consensus 25 ~~lkra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~-~v~Lla~iaD------~tKDglisf~eF~ 97 (694)
T KOG0751|consen 25 ELLKRADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDK-IVRLLASIAD------QTKDGLISFQEFR 97 (694)
T ss_pred HhhccCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChH-HHHHHHhhhh------hcccccccHHHHH
Confidence 34556678999999999985 34789999998886544444433332 2233333221 1134578888886
Q ss_pred HH
Q 007887 91 HY 92 (586)
Q Consensus 91 ~~ 92 (586)
.|
T Consensus 98 af 99 (694)
T KOG0751|consen 98 AF 99 (694)
T ss_pred HH
Confidence 43
No 287
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=26.71 E-value=66 Score=34.49 Aligned_cols=45 Identities=31% Similarity=0.383 Sum_probs=35.3
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007887 181 MKCLKSIKEHAFS------ASPYPVVITLEDHLTPHLQAKVAKMLAETFGD 225 (586)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (586)
.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 4667777777775 47899999999999999999999999999985
No 288
>PLN02591 tryptophan synthase
Probab=26.18 E-value=46 Score=34.05 Aligned_cols=93 Identities=24% Similarity=0.264 Sum_probs=54.0
Q ss_pred CCCChHHH---HHHH-hcCCcEEEEEee-cCCCCCCceEee--ccccccceeHHHHHHHHhhcccccCCCCeEEEecCCC
Q 007887 135 SDCSDVPI---IKAL-KRGVRVVELDIW-PNSTKDDVHVLH--GRTLTTPVELMKCLKSIKEHAFSASPYPVVITLEDHL 207 (586)
Q Consensus 135 g~SS~e~Y---~~aL-~~GCRcvElD~W-dg~~~~~piv~H--G~Tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc 207 (586)
|.-+.|.. +++| ..||-.|||.+= ..|-.+.|+|-. -..|..-++++++++.+++.. ...+-|+|| =-..
T Consensus 11 G~P~~e~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~il--m~Y~ 87 (250)
T PLN02591 11 GDPDLDTTAEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVL--FTYY 87 (250)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEE--Eecc
Confidence 44444443 4444 579999999872 112223466653 345777788899999999877 346779652 2333
Q ss_pred CHHHH---HHHHHHHHHHhhcccccC
Q 007887 208 TPHLQ---AKVAKMLAETFGDMLFVP 230 (586)
Q Consensus 208 s~~qQ---~~ma~~l~~i~Gd~L~~~ 230 (586)
++-.| ++..+-+++.=-|-|+.|
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~Gviip 113 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVP 113 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeC
Confidence 44344 344444444433445555
No 289
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=25.67 E-value=1.2e+02 Score=30.29 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=33.0
Q ss_pred CcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhhccc
Q 007887 150 VRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAF 192 (586)
Q Consensus 150 CRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF 192 (586)
+=+|-||+.+| -.++++||.-.+.+...+.++...+..+
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~ 161 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGA 161 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCC
Confidence 45677999996 2589999999999999999999999875
No 290
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=24.74 E-value=2.6e+02 Score=24.42 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=33.1
Q ss_pred CCCccCcEEEEEEEcCCccEEEEEEEEccCCCCCCccEEEEEECCCCCCcc
Q 007887 511 WTPVWEQEFTFPLTVPELALLRIEVHEYDMSEKDDFAGQTCLPVSELKPGI 561 (586)
Q Consensus 511 ~NPvWNE~f~F~v~~pela~Lrf~V~D~d~~~~ddflGq~~ipL~~L~~Gy 561 (586)
.+..|++.|.+.+.- ..-|.+.|+-.|. ..+.|-..+.|...+.|+
T Consensus 31 s~q~WDQ~Fti~LdR--sRELEI~VywrD~---RslCav~~lrLEd~~~~~ 76 (98)
T cd08687 31 SNQAWDQSFTLELER--SRELEIAVYWRDW---RSLCAVKFLKLEDERHEV 76 (98)
T ss_pred ccccccceeEEEeec--ccEEEEEEEEecc---hhhhhheeeEhhhhcccc
Confidence 367899999998853 2458899988774 457777778887744443
No 291
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=24.72 E-value=76 Score=33.86 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=37.1
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEecCCCCHHHHHHHHHHHHHHhhc
Q 007887 181 MKCLKSIKEHAFS------ASPYPVVITLEDHLTPHLQAKVAKMLAETFGD 225 (586)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (586)
.|+++.|=+|.|. .+++||+|+.=...+..+++.|+++|-|.||-
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 5777777777775 25799999866677799999999999999984
No 292
>PTZ00004 actin-2; Provisional
Probab=23.86 E-value=91 Score=33.60 Aligned_cols=46 Identities=20% Similarity=0.210 Sum_probs=36.6
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEecCCCCHHHHHHHHHHHHHHhhcc
Q 007887 181 MKCLKSIKEHAFS------ASPYPVVITLEDHLTPHLQAKVAKMLAETFGDM 226 (586)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~i~Gd~ 226 (586)
.|+++.|=+|+|. .+++||+|+--.+.+..++++|+++|=|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 4667777777663 368999998666778888999999999999854
No 293
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=23.41 E-value=1.7e+02 Score=30.03 Aligned_cols=85 Identities=19% Similarity=0.252 Sum_probs=63.1
Q ss_pred ccccccccCCCCCCCCCh-HHHHHHH-hcCCcEEEEEeecCCCCCCceEeeccccccceeHHHHHHHHhhcccccCCCCe
Q 007887 122 TGHNSYLTGNQLSSDCSD-VPIIKAL-KRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPV 199 (586)
Q Consensus 122 SSHNTYL~G~Ql~g~SS~-e~Y~~aL-~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPv 199 (586)
..+|.-|.|.-=+|+||. -+....+ ..|+|.||++=-+= ..+.++++.|+. .+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~L-----------------~~l~~l~~~l~~-----~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKEDL-----------------GDLPELLDLLRD-----RPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHHh-----------------ccHHHHHHHHhc-----CCCCE
Confidence 467889999999999985 3443333 45999999954331 245688888884 47889
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHhhccccc
Q 007887 200 VITLEDHLTPHLQAKVAKMLAETFGDMLFV 229 (586)
Q Consensus 200 ILSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (586)
||=+.+ .|.+..+.-.+.||.++---|-.
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgle~ 137 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGLEA 137 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCcccc
Confidence 998886 88888888889999999654433
No 294
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=23.33 E-value=63 Score=30.08 Aligned_cols=67 Identities=19% Similarity=0.309 Sum_probs=46.5
Q ss_pred CCCCCCChHHHHHHHhcCCc--EEEEEeecCC-------------CCCCceEeeccccc-cceeHHHHHHHHhhcccccC
Q 007887 132 QLSSDCSDVPIIKALKRGVR--VVELDIWPNS-------------TKDDVHVLHGRTLT-TPVELMKCLKSIKEHAFSAS 195 (586)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCR--cvElD~Wdg~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S 195 (586)
.+.|.-|.+.+.+.|+.-|+ -+|++|.-.. ++-..||.--..+| ++|..+|++.++
T Consensus 19 ~iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~-------- 90 (140)
T cd00466 19 EIYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAV-------- 90 (140)
T ss_pred CcCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcC--------
Confidence 36788889988888877666 5788886211 11134666555565 789999999887
Q ss_pred CCCeEEEecCCCCH
Q 007887 196 PYPVVITLEDHLTP 209 (586)
Q Consensus 196 ~yPvILSlE~Hcs~ 209 (586)
..|+ +|+|.|-
T Consensus 91 ~~P~---VEVHiSN 101 (140)
T cd00466 91 SIPV---IEVHISN 101 (140)
T ss_pred CCCE---EEEecCC
Confidence 4566 4899874
No 295
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=23.22 E-value=2.1e+02 Score=29.45 Aligned_cols=78 Identities=19% Similarity=0.292 Sum_probs=48.1
Q ss_pred CCCCCCCChHHHHHHHh----cCCcEEEEEeecCCCCCCceEee-ccc-cccceeHHHHHHHHhhcccccCCCCeEEEec
Q 007887 131 NQLSSDCSDVPIIKALK----RGVRVVELDIWPNSTKDDVHVLH-GRT-LTTPVELMKCLKSIKEHAFSASPYPVVITLE 204 (586)
Q Consensus 131 ~Ql~g~SS~e~Y~~aL~----~GCRcvElD~Wdg~~~~~piv~H-G~T-lts~i~f~dvi~aI~~~AF~~S~yPvILSlE 204 (586)
=||.| ++++.|.++.. .|+..|||.+.- |..-+ |.. +.+.=...+++++|++.. +.||++=|-
T Consensus 94 vsi~g-~~~~~~~~~a~~~~~~G~d~iElN~~c------P~~~~~g~~~~~~~~~~~eiv~~vr~~~----~~Pv~vKl~ 162 (296)
T cd04740 94 ASIAG-STVEEFVEVAEKLADAGADAIELNISC------PNVKGGGMAFGTDPEAVAEIVKAVKKAT----DVPVIVKLT 162 (296)
T ss_pred EEEec-CCHHHHHHHHHHHHHcCCCEEEEECCC------CCCCCCcccccCCHHHHHHHHHHHHhcc----CCCEEEEeC
Confidence 35655 45777776654 499999999874 22222 222 233445678999999864 799997763
Q ss_pred CCCCHHHHHHHHHHHHH
Q 007887 205 DHLTPHLQAKVAKMLAE 221 (586)
Q Consensus 205 ~Hcs~~qQ~~ma~~l~~ 221 (586)
. ..+.-..+|+.+.+
T Consensus 163 ~--~~~~~~~~a~~~~~ 177 (296)
T cd04740 163 P--NVTDIVEIARAAEE 177 (296)
T ss_pred C--CchhHHHHHHHHHH
Confidence 2 22334455665544
No 296
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=22.97 E-value=1e+02 Score=19.64 Aligned_cols=24 Identities=21% Similarity=0.594 Sum_probs=18.5
Q ss_pred HHHHHHHhhCC-CCccCHHHHHHHH
Q 007887 25 VKEAFNKYAEG-GTHMTAEQLRRFL 48 (586)
Q Consensus 25 l~~if~~~~~~-~~~~~~~~~~~Fl 48 (586)
|+.+|+.+=.+ ...++.++|.+|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 46678887544 5789999999985
No 297
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=22.53 E-value=1.6e+02 Score=30.45 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=39.6
Q ss_pred cccCCCCCCCCChHHHHHHHhcCCcEEEEEe--ecCCCCCCceEeecccccc--ce----eHHHHHHHHhhc
Q 007887 127 YLTGNQLSSDCSDVPIIKALKRGVRVVELDI--WPNSTKDDVHVLHGRTLTT--PV----ELMKCLKSIKEH 190 (586)
Q Consensus 127 YL~G~Ql~g~SS~e~Y~~aL~~GCRcvElD~--Wdg~~~~~piv~HG~Tlts--~i----~f~dvi~aI~~~ 190 (586)
|-+||-+. ++++.-.+|..|+-.||+|+ |++. .+=-.|||-.-++ .+ .|.+.++.+++-
T Consensus 1 ~~iaHmVn---~~~~v~~~l~~GANaiE~Dv~f~~~~--~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~ 67 (265)
T cd08576 1 YAIAHMVN---DLEGVDDALDHGANAIEIDVTFWSNG--TGWWADHDVPCDCFRGCTAREMFDEILDYRRNG 67 (265)
T ss_pred Ccchhhhc---cHHHHHHHHHcCCCceeEEEEEccCC--cEEEeeCCCccccccCCcHHHHHHHHHHHHHhc
Confidence 34455554 47888999999999999999 5432 2337899976555 33 455566666654
No 298
>PLN02964 phosphatidylserine decarboxylase
Probab=22.35 E-value=2.4e+02 Score=32.90 Aligned_cols=64 Identities=8% Similarity=0.080 Sum_probs=49.0
Q ss_pred hHHHHHHHhhCC-CCccCHHHHHHHHHHHhCCCCCChHHHHHHHHHHHhhccccccccCCccCHHHHHHHHcCC
Q 007887 24 DVKEAFNKYAEG-GTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHTLTLDDFHHYLFSS 96 (586)
Q Consensus 24 el~~if~~~~~~-~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~l~~~~F~~~L~S~ 96 (586)
++..+|..+-.+ ...|+.++|..+|.. .++ ..+.+++.++|+.|..+ +.+.++.++|.+.|.+.
T Consensus 180 fi~~mf~~~D~DgdG~IdfdEFl~lL~~-lg~-~~seEEL~eaFk~fDkD-------gdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 180 FARRILAIVDYDEDGQLSFSEFSDLIKA-FGN-LVAANKKEELFKAADLN-------GDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH-hcc-CCCHHHHHHHHHHhCCC-------CCCcCCHHHHHHHHHhc
Confidence 378899988544 468999999999985 443 35677888888887532 24689999999998864
No 299
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=21.77 E-value=2.3e+02 Score=28.94 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=41.9
Q ss_pred CCChHHHHHHHhcCCcEEEEEeec-----CCCCCCceEeeccccccceeHHHHHHHHh
Q 007887 136 DCSDVPIIKALKRGVRVVELDIWP-----NSTKDDVHVLHGRTLTTPVELMKCLKSIK 188 (586)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~Wd-----g~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (586)
--|-..-..||....-+||.||== |...+.||+.|=...+|.++|++.+.+|.
T Consensus 11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~ 68 (244)
T PF10223_consen 11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVL 68 (244)
T ss_pred cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHh
Confidence 345667778998888899999942 23345799999766789999999999998
Done!