Query 007890
Match_columns 586
No_of_seqs 240 out of 1929
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 13:02:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 8E-107 3E-111 891.7 60.3 539 40-584 1-540 (552)
2 3sqr_A Laccase; multicopper ox 100.0 9E-100 3E-104 828.3 54.7 477 39-575 64-550 (580)
3 1zpu_A Iron transport multicop 100.0 7.1E-97 2E-101 806.6 53.4 476 41-583 1-501 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 6.9E-96 2E-100 789.4 53.2 469 43-583 5-489 (495)
5 3pxl_A Laccase; 4-copper prote 100.0 7.8E-96 3E-100 788.8 53.6 466 43-583 4-489 (499)
6 1v10_A Laccase; multicopper bl 100.0 5.4E-95 1.9E-99 790.9 49.2 475 38-584 19-510 (521)
7 2q9o_A Laccase-1; multicopper 100.0 2E-94 6.9E-99 792.1 48.8 483 38-584 29-542 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 2.3E-92 7.8E-97 767.7 49.3 464 43-584 5-489 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.3E-85 7.9E-90 702.1 38.6 406 38-568 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.7E-84 9.4E-89 694.5 32.0 405 42-573 18-445 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 5.7E-82 1.9E-86 687.7 38.0 423 39-571 33-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 1.1E-80 3.6E-85 666.5 40.3 412 37-568 45-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 2.8E-80 9.5E-85 674.4 42.8 432 41-570 24-511 (513)
14 3aw5_A Multicopper oxidase; be 100.0 2.2E-81 7.5E-86 670.9 28.6 384 64-567 28-447 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 5.1E-79 1.7E-83 683.0 41.3 455 38-576 28-598 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1.1E-78 3.8E-83 650.4 33.8 415 40-567 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.4E-76 4.6E-81 649.7 45.1 461 39-583 29-605 (612)
18 3g5w_A Multicopper oxidase typ 100.0 3.2E-53 1.1E-57 433.3 28.2 270 41-342 1-277 (318)
19 2zwn_A Two-domain type laccase 100.0 1.7E-51 5.8E-56 425.1 34.4 270 41-342 2-278 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 6.1E-52 2.1E-56 484.7 32.0 268 36-341 15-356 (1065)
21 2r7e_A Coagulation factor VIII 100.0 8.7E-54 3E-58 481.2 12.9 225 58-323 63-315 (742)
22 3kw8_A Laccase, putative coppe 100.0 5.9E-50 2E-54 401.8 24.3 123 37-165 2-143 (276)
23 2dv6_A Nitrite reductase; elec 100.0 8.7E-50 3E-54 429.3 25.7 397 38-569 24-433 (447)
24 3t9w_A Small laccase, multi-co 100.0 5.1E-50 1.7E-54 406.1 21.2 134 37-181 24-177 (299)
25 1kbv_A ANIA, major outer membr 100.0 1.1E-48 3.8E-53 402.0 25.2 269 37-342 33-308 (327)
26 3tas_A Small laccase, multi-co 100.0 3.8E-48 1.3E-52 395.4 25.0 184 35-279 6-209 (313)
27 2j5w_A Ceruloplasmin, ferroxid 100.0 2.4E-48 8.2E-53 454.4 20.2 412 59-571 616-1060(1065)
28 3gdc_A Multicopper oxidase; be 100.0 8.3E-47 2.8E-51 381.2 26.9 239 38-322 30-273 (288)
29 3cg8_A Laccase; oxidoreductase 100.0 9.7E-47 3.3E-51 389.0 23.4 134 38-182 44-197 (343)
30 2zoo_A Probable nitrite reduct 100.0 2.2E-45 7.5E-50 394.1 26.0 272 36-343 22-299 (442)
31 1oe1_A Dissimilatory copper-co 100.0 3.5E-44 1.2E-48 370.9 25.6 271 37-342 27-319 (336)
32 1mzy_A Copper-containing nitri 100.0 6.1E-44 2.1E-48 368.5 26.5 271 36-341 26-318 (333)
33 2bw4_A Copper-containing nitri 100.0 1.9E-43 6.3E-48 366.1 23.4 270 37-341 33-324 (340)
34 1sdd_A Coagulation factor V; c 100.0 5.7E-42 1.9E-46 348.9 10.1 215 61-322 49-285 (306)
35 1sdd_B Coagulation factor V; c 100.0 1.4E-39 4.8E-44 364.4 24.2 248 39-322 3-312 (647)
36 2dv6_A Nitrite reductase; elec 100.0 3.1E-38 1.1E-42 339.3 29.2 266 39-341 160-433 (447)
37 2r7e_B Coagulation factor VIII 100.0 1.7E-39 5.7E-44 365.7 13.3 249 38-322 129-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 4E-36 1.4E-40 337.9 4.8 219 69-324 448-698 (742)
39 3gdc_A Multicopper oxidase; be 100.0 8.6E-29 3E-33 249.5 15.6 218 243-568 66-287 (288)
40 2zwn_A Two-domain type laccase 100.0 2.8E-28 9.6E-33 251.5 17.1 232 243-567 35-275 (339)
41 3g5w_A Multicopper oxidase typ 99.9 8.7E-28 3E-32 245.1 13.8 233 243-567 34-274 (318)
42 1sdd_A Coagulation factor V; c 99.9 1.5E-24 5.2E-29 220.3 1.9 228 244-569 61-300 (306)
43 1sdd_B Coagulation factor V; c 99.9 3.2E-22 1.1E-26 223.8 16.4 243 241-569 67-327 (647)
44 1kbv_A ANIA, major outer membr 99.9 9E-21 3.1E-25 194.3 18.5 235 243-568 70-306 (327)
45 2bw4_A Copper-containing nitri 99.8 3.3E-20 1.1E-24 191.6 19.2 88 462-568 233-323 (340)
46 2r7e_B Coagulation factor VIII 99.8 7.2E-22 2.5E-26 222.4 4.7 242 241-567 197-454 (770)
47 1mzy_A Copper-containing nitri 99.8 1.1E-18 3.9E-23 179.5 21.4 89 462-568 227-317 (333)
48 2zoo_A Probable nitrite reduct 99.8 4.3E-18 1.5E-22 182.1 17.7 235 243-568 60-296 (442)
49 1oe1_A Dissimilatory copper-co 99.7 8.9E-17 3E-21 165.6 21.3 88 462-568 227-317 (336)
50 3cvb_A Plastocyanin; cupredoxi 99.6 2.3E-16 8E-21 133.7 4.4 88 69-162 15-105 (105)
51 2uxt_A Protein SUFI, SUFI; oxi 99.6 6.1E-14 2.1E-18 149.7 23.4 240 42-323 152-427 (451)
52 3kw8_A Laccase, putative coppe 99.6 7E-15 2.4E-19 146.8 13.1 99 64-165 157-268 (276)
53 2xu9_A Laccase; oxidoreductase 99.6 9.5E-14 3.3E-18 147.9 20.5 245 41-323 145-426 (439)
54 3tas_A Small laccase, multi-co 99.5 6E-14 2E-18 142.6 13.6 217 240-569 39-271 (313)
55 2cal_A Rusticyanin; iron respi 99.5 6.3E-14 2.1E-18 126.7 10.3 100 57-161 46-154 (154)
56 1v10_A Laccase; multicopper bl 99.5 1.6E-12 5.5E-17 141.2 23.0 250 61-323 191-477 (521)
57 1hfu_A Laccase 1; oxidoreducta 99.5 1.1E-12 3.8E-17 141.9 21.1 271 44-323 143-456 (503)
58 1iby_A Nitrosocyanin; RED copp 99.4 6E-13 2E-17 114.0 9.2 105 43-162 2-112 (112)
59 3zx1_A Oxidoreductase, putativ 99.4 1.9E-11 6.4E-16 130.7 22.5 244 43-322 181-466 (481)
60 3t6v_A Laccase; beta barrel, o 99.4 3.6E-11 1.2E-15 129.4 22.6 257 61-323 168-457 (495)
61 3cg8_A Laccase; oxidoreductase 99.4 1.5E-12 5.2E-17 133.7 11.3 99 64-165 198-309 (343)
62 3pxl_A Laccase; 4-copper prote 99.3 4.3E-11 1.5E-15 128.8 19.2 256 61-323 166-457 (499)
63 1fwx_A Nitrous oxide reductase 99.3 5.2E-12 1.8E-16 136.5 11.3 95 57-164 497-594 (595)
64 1zpu_A Iron transport multicop 99.3 3.1E-10 1.1E-14 123.4 25.5 253 61-323 167-467 (534)
65 1aoz_A Ascorbate oxidase; oxid 99.3 1.1E-10 3.7E-15 127.9 20.8 241 74-323 205-511 (552)
66 3aw5_A Multicopper oxidase; be 99.3 9.7E-11 3.3E-15 124.7 18.9 213 60-322 168-434 (448)
67 3od3_A Blue copper oxidase CUE 99.3 1.7E-10 5.7E-15 123.4 20.3 253 43-322 151-475 (488)
68 2q9o_A Laccase-1; multicopper 99.2 1.6E-09 5.6E-14 118.5 25.5 254 61-323 195-507 (559)
69 2ov0_A Amicyanin; beta-sandwic 99.2 3.7E-11 1.3E-15 101.4 8.6 79 67-161 27-105 (105)
70 2g23_A PHS, phenoxazinone synt 99.2 2.1E-09 7.3E-14 117.9 22.6 231 61-323 254-577 (612)
71 3abg_A Bilirubin oxidase; clea 99.1 3.7E-09 1.2E-13 114.9 21.6 229 61-323 201-461 (534)
72 2gim_A Plastocyanin; beta shee 99.1 1.4E-10 4.9E-15 98.0 6.8 85 70-162 17-106 (106)
73 3cvb_A Plastocyanin; cupredoxi 99.1 2.5E-10 8.4E-15 96.3 7.9 83 462-568 21-104 (105)
74 3t9w_A Small laccase, multi-co 99.1 5.7E-10 1.9E-14 112.3 11.6 100 64-165 179-290 (299)
75 2wsd_A Spore coat protein A; o 99.1 8.6E-10 2.9E-14 119.6 13.6 217 61-323 230-496 (513)
76 2aan_A Auracyanin A; cupredoxi 99.0 1E-09 3.5E-14 97.5 10.1 91 69-161 31-139 (139)
77 2aan_A Auracyanin A; cupredoxi 99.0 1.5E-09 5E-14 96.5 9.8 93 462-567 37-138 (139)
78 3sqr_A Laccase; multicopper ox 98.9 7.9E-08 2.7E-12 104.8 23.3 251 61-323 225-530 (580)
79 4hci_A Cupredoxin 1; structura 98.9 4.3E-09 1.5E-13 87.8 8.6 79 67-161 22-100 (100)
80 2plt_A Plastocyanin; electron 98.9 2.9E-09 1E-13 88.4 6.2 78 72-161 17-98 (98)
81 1pcs_A Plastocyanin; electron 98.8 1.3E-08 4.4E-13 84.5 8.4 83 70-161 16-98 (98)
82 3gyr_A PHS, phenoxazinone synt 98.8 3.6E-07 1.2E-11 101.5 22.6 78 244-323 473-577 (612)
83 1qhq_A Protein (auracyanin); e 98.8 2.2E-08 7.6E-13 88.9 10.3 93 69-162 29-140 (140)
84 2gim_A Plastocyanin; beta shee 98.8 1E-08 3.5E-13 86.4 7.7 83 462-568 22-105 (106)
85 1bxv_A Plastocyanin; copper pr 98.8 1.3E-08 4.6E-13 83.1 7.7 76 70-161 16-91 (91)
86 3c75_A Amicyanin; copper prote 98.8 1E-08 3.5E-13 89.9 7.0 79 67-161 54-132 (132)
87 1b3i_A PETE protein, protein ( 98.7 2E-08 6.9E-13 83.1 6.9 78 72-161 18-97 (97)
88 1qhq_A Protein (auracyanin); e 98.7 4.3E-08 1.5E-12 87.1 8.2 96 462-569 35-140 (140)
89 1byp_A Protein (plastocyanin); 98.7 5.9E-08 2E-12 80.6 8.5 78 72-161 16-99 (99)
90 3erx_A Pseudoazurin; copper pr 98.7 1.1E-07 3.7E-12 82.0 10.1 76 72-163 20-95 (123)
91 1kdj_A Plastocyanin; electron 98.7 4.6E-08 1.6E-12 81.8 7.5 82 70-161 14-102 (102)
92 1plc_A Plastocyanin; electron 98.7 6.6E-08 2.3E-12 80.3 8.4 78 72-161 16-99 (99)
93 3tu6_A Pseudoazurin (blue copp 98.6 1.1E-07 3.8E-12 82.4 9.0 77 72-164 22-98 (127)
94 3ef4_A Pseudoazurin, blue copp 98.6 1.3E-07 4.5E-12 81.4 8.2 76 72-163 21-96 (124)
95 1pcs_A Plastocyanin; electron 98.6 6.1E-08 2.1E-12 80.3 5.6 76 462-567 21-97 (98)
96 2plt_A Plastocyanin; electron 98.5 2.3E-07 7.8E-12 76.8 7.9 78 462-567 20-97 (98)
97 1bxv_A Plastocyanin; copper pr 98.5 3.7E-07 1.3E-11 74.3 7.7 70 462-567 21-90 (91)
98 1b3i_A PETE protein, protein ( 98.4 1.7E-07 5.7E-12 77.5 4.6 76 462-567 21-96 (97)
99 1cuo_A Protein (azurin ISO-2); 98.4 9.9E-07 3.4E-11 76.6 9.5 92 69-162 14-129 (129)
100 1iuz_A Plastocyanin; electron 98.4 1.4E-06 4.7E-11 72.1 8.7 80 70-161 15-98 (98)
101 1paz_A Pseudoazurin precursor; 98.3 1.4E-06 4.8E-11 75.1 8.2 76 72-163 20-95 (123)
102 3ay2_A Lipid modified azurin p 98.3 1.1E-06 3.9E-11 79.4 7.0 92 69-162 54-167 (167)
103 1byp_A Protein (plastocyanin); 98.3 1.8E-06 6.1E-11 71.5 7.6 80 462-567 19-98 (99)
104 1pmy_A Pseudoazurin; electron 98.3 1.7E-06 5.9E-11 74.5 7.7 76 72-163 20-95 (123)
105 1iby_A Nitrosocyanin; RED copp 98.3 2.4E-06 8.3E-11 72.5 8.6 72 462-568 40-111 (112)
106 4hci_A Cupredoxin 1; structura 98.2 2.8E-06 9.6E-11 70.5 8.3 70 462-567 30-99 (100)
107 1id2_A Amicyanin; beta barrel, 98.2 5.7E-06 1.9E-10 69.4 8.9 77 69-161 30-106 (106)
108 2ccw_A Azurin II, AZN-2; elect 98.1 6.7E-06 2.3E-10 71.4 8.2 91 69-161 14-128 (129)
109 1kdj_A Plastocyanin; electron 98.1 3.5E-06 1.2E-10 70.1 6.3 82 462-567 19-101 (102)
110 3sbq_A Nitrous-oxide reductase 98.1 1.4E-05 4.7E-10 84.8 11.6 88 63-163 548-638 (638)
111 2iaa_C Azurin; quinoprotein, t 98.1 9.5E-06 3.3E-10 70.2 8.6 91 69-161 13-127 (128)
112 1nwp_A Azurin; electron transp 98.1 1.8E-05 6.2E-10 68.5 9.8 91 69-161 14-128 (128)
113 1plc_A Plastocyanin; electron 97.9 1E-05 3.4E-10 66.9 5.8 80 462-567 19-98 (99)
114 2ux6_A Pseudoazurin; type-1 co 97.9 3.6E-05 1.2E-09 66.1 7.8 74 72-163 20-93 (122)
115 2cal_A Rusticyanin; iron respi 97.8 4.1E-05 1.4E-09 68.7 7.8 82 461-567 62-153 (154)
116 2ov0_A Amicyanin; beta-sandwic 97.8 6.3E-05 2.1E-09 62.8 7.7 70 462-567 35-104 (105)
117 1fwx_A Nitrous oxide reductase 97.7 0.00011 3.6E-09 79.7 9.4 77 461-570 514-593 (595)
118 3fsa_A Azurin; copper, cupredo 97.4 0.00049 1.7E-08 58.6 8.1 86 69-161 14-125 (125)
119 1iuz_A Plastocyanin; electron 97.1 0.0017 5.9E-08 53.1 8.1 78 462-567 20-97 (98)
120 2cua_A Protein (CUA); CUA cent 97.0 0.0036 1.2E-07 54.5 9.9 75 73-162 60-135 (135)
121 1id2_A Amicyanin; beta barrel, 96.9 0.0023 8E-08 53.2 7.7 70 462-567 36-105 (106)
122 3ef4_A Pseudoazurin, blue copp 96.9 0.0019 6.5E-08 55.3 7.1 72 462-569 24-95 (124)
123 3erx_A Pseudoazurin; copper pr 96.8 0.0031 1.1E-07 54.0 7.8 71 462-568 23-93 (123)
124 3c75_A Amicyanin; copper prote 96.8 0.0034 1.2E-07 54.5 7.7 70 462-567 62-131 (132)
125 3tu6_A Pseudoazurin (blue copp 96.8 0.0024 8.4E-08 54.9 6.6 72 462-569 25-96 (127)
126 3s8f_B Cytochrome C oxidase su 96.7 0.0074 2.5E-07 54.3 9.9 76 72-162 92-168 (168)
127 1pmy_A Pseudoazurin; electron 95.8 0.015 5.1E-07 49.7 6.4 37 529-569 58-94 (123)
128 1paz_A Pseudoazurin precursor; 95.7 0.031 1.1E-06 47.7 7.9 36 530-569 59-94 (123)
129 2cua_A Protein (CUA); CUA cent 95.5 0.059 2E-06 46.7 9.0 69 462-567 62-133 (135)
130 3sbq_A Nitrous-oxide reductase 95.3 0.049 1.7E-06 58.0 9.1 78 461-569 559-637 (638)
131 3ay2_A Lipid modified azurin p 94.7 0.066 2.3E-06 48.1 7.1 96 462-568 60-166 (167)
132 1cuo_A Protein (azurin ISO-2); 94.4 0.15 5.3E-06 43.6 8.5 95 462-567 20-127 (129)
133 2ux6_A Pseudoazurin; type-1 co 93.8 0.14 4.9E-06 43.4 7.0 70 462-569 23-92 (122)
134 2iaa_C Azurin; quinoprotein, t 93.4 0.29 9.9E-06 41.8 8.4 98 462-568 19-127 (128)
135 3fsa_A Azurin; copper, cupredo 93.0 0.52 1.8E-05 39.9 9.1 94 462-567 20-124 (125)
136 3s8f_B Cytochrome C oxidase su 92.5 0.55 1.9E-05 42.1 9.0 71 462-567 95-166 (168)
137 1nwp_A Azurin; electron transp 92.4 0.6 2E-05 39.9 8.9 97 462-567 20-127 (128)
138 2ccw_A Azurin II, AZN-2; elect 92.2 0.88 3E-05 38.8 9.7 96 462-568 20-128 (129)
139 3isy_A Bsupi, intracellular pr 88.1 7.3 0.00025 32.5 11.6 76 249-325 16-105 (120)
140 1cyx_A CYOA; electron transpor 84.7 3 0.0001 38.4 8.1 76 73-163 41-118 (205)
141 2gsm_B Cytochrome C oxidase su 83.2 8.7 0.0003 36.9 11.2 76 73-163 171-247 (262)
142 3isy_A Bsupi, intracellular pr 78.1 22 0.00076 29.6 10.5 70 64-145 25-100 (120)
143 3hb3_B Cytochrome C oxidase su 77.6 5.1 0.00017 39.2 7.4 77 73-164 189-266 (298)
144 1x9u_A Umecyanin; cupredoxin, 73.9 0.99 3.4E-05 37.7 1.1 36 130-165 72-108 (116)
145 1v54_B Cytochrome C oxidase po 72.4 25 0.00084 32.9 10.5 76 73-163 140-216 (227)
146 1ws8_A Mavicyanin; oxidized fo 65.9 3.6 0.00012 33.9 2.8 34 130-163 72-105 (109)
147 1jer_A Cucumber stellacyanin; 64.0 7.4 0.00025 33.4 4.5 35 131-165 76-111 (138)
148 1cyx_A CYOA; electron transpor 62.0 16 0.00055 33.5 6.7 71 462-567 43-114 (205)
149 3hb3_B Cytochrome C oxidase su 55.5 25 0.00087 34.2 7.2 70 462-566 191-261 (298)
150 1fft_B Ubiquinol oxidase; elec 50.3 13 0.00044 36.7 4.2 74 73-161 151-225 (315)
151 2r39_A FIXG-related protein; s 50.0 31 0.001 28.4 6.0 46 252-307 34-81 (118)
152 2cbp_A Cucumber basic protein; 48.9 8.7 0.0003 30.7 2.3 29 131-160 67-95 (96)
153 2c34_A ICP, inhibitor of cyste 44.7 70 0.0024 26.2 7.3 64 72-140 14-89 (116)
154 3idu_A Uncharacterized protein 44.6 1.4E+02 0.0047 24.9 10.2 71 246-325 28-100 (127)
155 2gsm_B Cytochrome C oxidase su 43.9 49 0.0017 31.6 7.1 70 462-566 173-243 (262)
156 1f56_A Plantacyanin; cupredoxi 43.8 13 0.00045 29.3 2.6 74 72-160 14-90 (91)
157 2x3c_A Toxic extracellular end 41.0 61 0.0021 32.2 7.6 27 119-145 94-126 (343)
158 1v54_B Cytochrome C oxidase po 40.2 45 0.0015 31.1 6.1 70 462-566 142-212 (227)
159 2cio_B Inhibitor of cysteine p 35.0 1.3E+02 0.0045 24.7 7.6 66 72-140 12-93 (121)
160 1xwv_A DER F II; beta sheets, 34.7 79 0.0027 26.4 6.3 68 65-134 17-92 (129)
161 1nep_A EPV20, BNPC2, epididyma 33.7 81 0.0028 26.3 6.2 68 65-134 19-94 (130)
162 1fft_B Ubiquinol oxidase; elec 29.4 87 0.003 30.7 6.4 71 462-567 153-224 (315)
163 2f1e_A Protein APAG; APAG prot 28.6 69 0.0023 26.9 4.7 47 84-132 34-86 (127)
164 2h7w_A Chagasin; beta-strands, 27.1 2E+02 0.0067 24.1 7.4 66 72-140 32-104 (131)
165 2wtp_A ORF131 protein, CZCE; m 26.9 27 0.00093 29.4 1.9 20 244-263 72-91 (131)
166 1xvs_A Protein APAG; MCSG APC2 26.1 70 0.0024 26.8 4.3 46 84-131 33-84 (126)
167 3rfr_A PMOB; membrane, oxidore 25.8 1.2E+02 0.0042 30.4 6.6 53 82-137 301-369 (419)
168 2p9r_A Alpha-2-M, alpha-2-macr 25.7 1.9E+02 0.0065 22.5 6.9 69 247-321 13-84 (102)
169 2x3c_A Toxic extracellular end 24.2 2.5E+02 0.0084 27.8 8.7 69 252-321 39-127 (343)
170 2xzz_A Protein-glutamine gamma 23.7 1.1E+02 0.0037 24.5 4.9 51 82-139 23-78 (102)
171 1xq4_A Protein APAG; all beta 23.6 84 0.0029 26.8 4.4 46 84-131 38-89 (139)
172 2hj1_A Hypothetical protein; s 22.8 38 0.0013 27.0 1.9 25 61-85 58-82 (97)
173 2wgn_B Inhibitor of cysteine p 22.4 3.4E+02 0.012 22.6 8.2 71 67-140 29-105 (132)
174 2qjv_A Uncharacterized IOLB-li 21.6 3.3E+02 0.011 25.9 8.6 72 244-321 33-111 (270)
175 1tza_A APAG protein, SOR45; st 21.3 81 0.0028 26.7 3.8 46 84-131 33-84 (134)
176 3rpf_C Molybdopterin convertin 21.3 49 0.0017 24.5 2.3 25 61-85 42-67 (74)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=7.7e-107 Score=891.66 Aligned_cols=539 Identities=52% Similarity=0.994 Sum_probs=433.0
Q ss_pred cceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccc
Q 007890 40 ARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQ 119 (586)
Q Consensus 40 ~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q 119 (586)
+++|+|+|+|++..+.+||..+.+|+|||++|||+||+++||+|+|+|+|+|..++|+|||||+++.+++|+||+++++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999954499999999999999999999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeeccccccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHhcccCCC
Q 007890 120 CPILPGETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAAGLSSIP 199 (586)
Q Consensus 120 ~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 199 (586)
|+|+||++|+|+|+++++||||||||.+.|+.+||+|+|||++++....|+.+|+|++|+|+||+++...++...+...+
T Consensus 81 ~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (552)
T 1aoz_A 81 CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKP 160 (552)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSS
T ss_pred CCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999998765567888999999999999998877665544433
Q ss_pred CCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCC-CCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEE
Q 007890 200 FQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNET-NPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVV 278 (586)
Q Consensus 200 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~vi 278 (586)
..+.+.++++||||+..++|+...... .....|+.. +.....+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 161 ~~~~~~~~~~liNG~~~~~c~~~~~~~-~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 161 IRWIGEPQTILLNGRGQFDCSIAAKYD-SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp CCCCCSCSEEEETTBCCSSSBTTGGGC-TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred ccCCCCCCeEEECCccccCcccCcccc-cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 333457899999999999997521000 011236543 333445589999999999999999999999999999999999
Q ss_pred ecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCc
Q 007890 279 EADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLW 358 (586)
Q Consensus 279 a~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~ 358 (586)
|+||++++|+.++++.|+|||||||+|++++.++|+|||++....... ......|+|+|.+......+....|..|.+
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~--~~~~~~ail~y~~~~~~~~p~~~~p~~p~~ 317 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP--NTPPGLTLLNYLPNSVSKLPTSPPPQTPAW 317 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCC--CSCCEEEEEEETTSCTTSCCSSCCCCCCCT
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCC--CCccEEEEEEECCCCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999995436799999998775222 456789999998654322222233445555
Q ss_pred CCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCC
Q 007890 359 NDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDG 438 (586)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~ 438 (586)
++......+......... +..++...++++.+....+..++...|+|||++|..|+.|.|.+.+.++.+.|+.+.++..
T Consensus 318 ~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~ 396 (552)
T 1aoz_A 318 DDFDRSKNFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEV 396 (552)
T ss_dssp TCHHHHHHHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSC
T ss_pred ccccccccccccccccCC-CCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccc
Confidence 543322222111111111 2234556788888877655445677899999999999999999998888887764433320
Q ss_pred CCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCC
Q 007890 439 YDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNL 518 (586)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~ 518 (586)
+. .+|+...++.+...+.++.++.++.|++|||+|+|.+.+.+.....||||||||+||||++|.|.|++ .+...+|+
T Consensus 397 ~~-~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~ 474 (552)
T 1aoz_A 397 FP-EDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNL 474 (552)
T ss_dssp CC-TTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSCC
T ss_pred cc-cccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-cccccccc
Confidence 00 12332222222344556778999999999999999875411123479999999999999999898876 34567899
Q ss_pred CCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccCCCCCcccCCC
Q 007890 519 VNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGELPSSIKGCVH 584 (586)
Q Consensus 519 ~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~P~~~~~C~~ 584 (586)
.+|+|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|++++++++|+++++||+
T Consensus 475 ~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~ 540 (552)
T 1aoz_A 475 KNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGG 540 (552)
T ss_dssp SSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHH
T ss_pred CCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999985
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=9.4e-100 Score=828.26 Aligned_cols=477 Identities=30% Similarity=0.535 Sum_probs=385.5
Q ss_pred ccceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccc
Q 007890 39 EARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVT 118 (586)
Q Consensus 39 ~~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~ 118 (586)
.+++++|+|++++..+.+||..+.+|+|||++|||+|++++||+|+|+|+|+|..++|+|||||+++.+++|+||+++++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 46789999999999999999999999999999999999999999999999995448999999999999999999999999
Q ss_pred cccCCCCCeEEEEEEcCCCcceeeeccccccccCcceEEEEEECCCCCCCCCcccccc-eEEEEecccCCHHHHHhcccC
Q 007890 119 QCPILPGETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYDYDR-SIILNDWFHRSAFEQAAGLSS 197 (586)
Q Consensus 119 q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~l~d~~~~~~~~~~~~~~~ 197 (586)
||+|+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.+ ..||.|. +|+|+||+++...++......
T Consensus 144 q~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~ 219 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARL 219 (580)
T ss_dssp BCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTT
T ss_pred cCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998753 3578887 999999999998877665544
Q ss_pred CCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEE
Q 007890 198 IPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTV 277 (586)
Q Consensus 198 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~v 277 (586)
.+ ...++++||||++.++|+.... ..|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|
T Consensus 220 ~~---~~~~d~~liNG~~~~~c~~~~~------~~~~~---~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V 287 (580)
T 3sqr_A 220 GA---PPALENTLMNGTNTFDCSASTD------PNCVG---GGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV 287 (580)
T ss_dssp SC---CCCBSEEEETTBCCCCCTTCCC------TTBCC---CCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE
T ss_pred cC---CCCCceEEECCcccCCCccccc------ccccc---CCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE
Confidence 32 4578999999999988864110 12321 234568999999999999999999999999999999999
Q ss_pred EecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC-CCCCCeEEEEEecCCCCCCCCCCCCCCCC
Q 007890 278 VEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT-FTTPPGLAILNYYPNHPKRSPPTTPPSGP 356 (586)
Q Consensus 278 ia~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~~~p~~p 356 (586)
||+||.+++|+.+++|.|+|||||||+|++++ ++|+|||++.....|.. .......|||+|.++... .|..+
T Consensus 288 Ia~DG~~v~P~~~~~l~i~pGqRydVlv~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~------~P~~~ 360 (580)
T 3sqr_A 288 IANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA------NPTSV 360 (580)
T ss_dssp EEETTEEEEEEEESSEEECTTCEEEEEEECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC------CCCCC
T ss_pred EEeCCccCCceEeeEEEEccceEEEEEEEeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC------CCCCC
Confidence 99999999999999999999999999999998 67899999988766642 233467999999854321 11122
Q ss_pred CcCCccccccc-cccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccC-CCCchHHHhhhccccCCCCCC
Q 007890 357 LWNDVGSRLNQ-SLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTL-PHIPYLIALKENITSAFDQTP 434 (586)
Q Consensus 357 ~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~f~~~~ 434 (586)
.++......+. ...+.+..+ ...+...+.++.+... ..+...|+|||++|.. ++.|.|.+++.+. ..|
T Consensus 361 ~~~~~~~~~~~~~~~L~P~~~--~~~~~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-~~~---- 430 (580)
T 3sqr_A 361 GTTPRGTCEDEPVASLVPHLA--LDVGGYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-TIF---- 430 (580)
T ss_dssp CCCCCCCSCCSCGGGCCBSSC--CBCCSEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-CCC----
T ss_pred CCCccchhhcccccccccCCC--CCCCCccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC-ccC----
Confidence 22211111111 112222211 1223233444444432 2356799999999975 5889988776331 111
Q ss_pred CCCCCCccccccccCcCCccccccceEEEe----cCCCEEEEEEecCC--CCCCCCCCCCCccccCCCeEEEeeecCCCC
Q 007890 435 PPDGYDFKNYDIFSVAENKSYTIRNGVYRL----NFNSTVDIILQNAN--SLSNKTSETHPWHLHGHDFWVLGYGEGKFD 508 (586)
Q Consensus 435 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~l~N~~--~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~ 508 (586)
|. ...++.+ +.|++|||+|+|.+ .+ .||||||||+||||++|.|.|+
T Consensus 431 -~~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~------~HP~HLHGh~F~vv~~g~G~f~ 483 (580)
T 3sqr_A 431 -PT--------------------EYNVVALEQTNANEEWVVYVIEDLTGFGI------WHPIHLHGHDFFIVAQETDVFN 483 (580)
T ss_dssp -CG--------------------GGCEEEECC----CCEEEEEEEECSSSCC------CEEEEESSCCEEEEEEESSCCC
T ss_pred -CC--------------------CcceeecccccCCCcEEEEEEeCCCcccc------ceeeEecCceEEEEecCCCccC
Confidence 10 0112444 46999999999987 44 8999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccCC
Q 007890 509 IYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGEL 575 (586)
Q Consensus 509 ~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~ 575 (586)
+..++..+|+.+|++|||+.|+++||++|||++||||.|+|||||+||++.||+++|.|+++++++.
T Consensus 484 ~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~ 550 (580)
T 3sqr_A 484 SDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVK 550 (580)
T ss_dssp TTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCC
T ss_pred ccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhc
Confidence 8766788999999999999999999999999999999999999999999999999999999998763
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-97 Score=806.56 Aligned_cols=476 Identities=29% Similarity=0.470 Sum_probs=377.7
Q ss_pred ceEEEEEEEEEEeeCCCC-ceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccc
Q 007890 41 RIRRYKWEVKYEYKSPDC-FRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQ 119 (586)
Q Consensus 41 ~~~~~~l~~~~~~~~~dg-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q 119 (586)
++++|+|++++..+++|| +.+.+|+|||++|||+|++++||+|+|+|+|+|..++|||||||+++.+++|+||+++++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999954499999999999998899999999999
Q ss_pred ccCCCCCeEEEEEEcC-CCcceeeeccccccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHhcccCC
Q 007890 120 CPILPGETFTYKFVVD-RPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAAGLSSI 198 (586)
Q Consensus 120 ~~i~pG~~~~Y~f~~~-~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 198 (586)
|+|+||++|+|+|++. ++||||||||...|+.+||+|+|||+++++ |+.||+|++|+|+||+++...++...+...
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 157 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSV 157 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSST
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhcc
Confidence 9999999999999996 999999999999999999999999999853 667899999999999999988776543321
Q ss_pred C--CCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeE
Q 007890 199 P--FQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMT 276 (586)
Q Consensus 199 ~--~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~ 276 (586)
. ......++.+||||+..+ .++|++|++|||||||+|..+.+.|+|+||+|+
T Consensus 158 ~~~~g~~~~~d~~liNG~~~~--------------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~ 211 (534)
T 1zpu_A 158 YNPTGAEPIPQNLIVNNTMNL--------------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMT 211 (534)
T ss_dssp TCTTCCCCCCSEEEETTBSSC--------------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCEE
T ss_pred ccCCCCCCCCceEEECCCCce--------------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCeeE
Confidence 1 111456899999999765 799999999999999999999999999999999
Q ss_pred EEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC----CCCCCeEEEEEecCCCCCCCCCCCC
Q 007890 277 VVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT----FTTPPGLAILNYYPNHPKRSPPTTP 352 (586)
Q Consensus 277 via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~----~~~~~~~ail~y~~~~~~~~~~~~~ 352 (586)
|||+||++++|+.+++|.|+|||||||+|++++.++++|||++.....+.. .......++|+|++....+.+.
T Consensus 212 vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~--- 288 (534)
T 1zpu_A 212 VVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQN--- 288 (534)
T ss_dssp EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCC---
T ss_pred EEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCC---
Confidence 999999999999999999999999999999987556899999987654321 1234567999998643211110
Q ss_pred CCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeec-CCCeEEEEEcCccccCCCCchHHHhhhccccCCC
Q 007890 353 PSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNN-VSGNVRWSVNKVTYTLPHIPYLIALKENITSAFD 431 (586)
Q Consensus 353 p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 431 (586)
....+... ..+ ..+..... ...+...++++.+...... .++...|+|||++|..|+.|.|.+.... +.+.
T Consensus 289 -~~~~~~~~--~~~--~~l~p~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~ 359 (534)
T 1zpu_A 289 -YVDSIDNF--LDD--FYLQPYEK--EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA 359 (534)
T ss_dssp -CCSCSSCS--CCG--GGCCBSSC--CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT
T ss_pred -cccccccc--ccc--ccceeCCC--CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc
Confidence 01111110 000 11111111 1223456788877665432 3455689999999999999998877532 1110
Q ss_pred CCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecC------
Q 007890 432 QTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEG------ 505 (586)
Q Consensus 432 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g------ 505 (586)
..+. ....++..+.++.|++|+|+|+|.+.+ .||||||||+||||+++.+
T Consensus 360 --~~~~----------------~~~~~~~~~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~ 415 (534)
T 1zpu_A 360 --NNSE----------------IYGSNTHTFILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALG 415 (534)
T ss_dssp --TCGG----------------GGCSSSCEEEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGT
T ss_pred --CCCc----------------ccCCCceEEEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCcccccc
Confidence 0000 001124458999999999999998766 8999999999999999864
Q ss_pred ----CCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccC-----CC
Q 007890 506 ----KFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGE-----LP 576 (586)
Q Consensus 506 ----~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~-----~P 576 (586)
.|++.. .. ....+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|+++++++ +|
T Consensus 416 G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p 493 (534)
T 1zpu_A 416 EVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLS 493 (534)
T ss_dssp CCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCC
T ss_pred CcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCC
Confidence 333221 11 22468999999999999999999999999999999999999999999999999888753 34
Q ss_pred C-CcccCC
Q 007890 577 S-SIKGCV 583 (586)
Q Consensus 577 ~-~~~~C~ 583 (586)
+ ..+.|.
T Consensus 494 ~~~~~~C~ 501 (534)
T 1zpu_A 494 ENHLEVCQ 501 (534)
T ss_dssp HHHHHHHH
T ss_pred hhHhhhhh
Confidence 3 355664
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.9e-96 Score=789.39 Aligned_cols=469 Identities=32% Similarity=0.513 Sum_probs=368.8
Q ss_pred EEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCC----CCeeEEecceeeccCCCCCCCCccc
Q 007890 43 RRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLT----ENVAIHWHGIRQIGTPWADGTEGVT 118 (586)
Q Consensus 43 ~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~----~~~siH~HGl~~~~~~~~DGv~~~~ 118 (586)
..|+|++++..++|||+.|.+|+|||++|||+||+++||+|+|+|+|+|.. ++|||||||+++.+++|+||+++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999543 4899999999999889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeeccccccccCcceEEEEEECCCCC-CCCCccc-ccceEEEEecccCCHHHHHhcc
Q 007890 119 QCPILPGETFTYKFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPEGE-SEPYAYD-YDRSIILNDWFHRSAFEQAAGL 195 (586)
Q Consensus 119 q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~d-~e~~l~l~d~~~~~~~~~~~~~ 195 (586)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+. ..++++| +|++|+|+||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999 89999999999999999999999999987641 1224443 578999999999876432
Q ss_pred cCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCee
Q 007890 196 SSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNM 275 (586)
Q Consensus 196 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~ 275 (586)
.+ ..+..++++||||+++..|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 161 --~~-~~p~~~d~~liNG~g~~~~~~----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~ 221 (495)
T 3t6v_A 161 --GA-GGAITADSTLIDGLGRTHVNV----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDM 221 (495)
T ss_dssp --CS-SSCCCCSEEEETTBCCBSSSC----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCE
T ss_pred --cc-CCCCCCcEEEECCcCcCCCCc----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeE
Confidence 11 114478999999998764421 02234689999999999999999999999999999999
Q ss_pred EEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCC
Q 007890 276 TVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSG 355 (586)
Q Consensus 276 ~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~ 355 (586)
+|||+||.+++|+.+++|.|+|||||||+|++++ ++|+|||++.....+..+......|||+|+++.... +....+..
T Consensus 222 ~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~~ 299 (495)
T 3t6v_A 222 TIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVASTV 299 (495)
T ss_dssp EEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCSS
T ss_pred EEEEeCCcccCCEEeeeEEEcCceEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCCC
Confidence 9999999999999999999999999999999988 568999999876555433333457999998653221 11111100
Q ss_pred CCcCCccccccccccccccCC--CCC-CCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCC
Q 007890 356 PLWNDVGSRLNQSLAIKARKG--FII-PPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQ 432 (586)
Q Consensus 356 p~~~~~~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~ 432 (586)
. .....+ ..+.+... .+. ..+..+++++.+....+. ..|+|||++|..|+.|.|.+...+. ++.
T Consensus 300 -~---~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~----~~w~iNg~s~~~~~~P~L~~~~~g~---~~~ 366 (495)
T 3t6v_A 300 -H---TKCLIE--TDLHPLSRNGVPGNPHQGGADCNLNLSLGFAC----GNFVINGVSFTPPTVPVLLQICSGA---NTA 366 (495)
T ss_dssp -C---SSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEET----TEEEETTBCCCCCSSCHHHHHHTTC---CSS
T ss_pred -C---cccccc--ccccccccccCCCccCCCCCcEEEEEEEEecC----cEEEEcCEecCCCCCcchhhhhcCC---cCc
Confidence 0 011111 11222211 011 112346777766554321 2799999999999999998876432 110
Q ss_pred CCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEe-cCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCC
Q 007890 433 TPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQ-NANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYN 511 (586)
Q Consensus 433 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~-N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~ 511 (586)
. + ....+.++.++.|++|||+|+ |...+ .||||||||+|+||+.+ |
T Consensus 367 ~---------~-----------~~~~~~v~~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~-g------ 413 (495)
T 3t6v_A 367 A---------D-----------LLPSGSVISLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESA-S------ 413 (495)
T ss_dssp T---------T-----------SSSTTSEEEECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECT-T------
T ss_pred c---------c-----------ccCCcceEEecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecC-C------
Confidence 0 0 001233689999999999998 55544 89999999999999763 2
Q ss_pred CCCCCCCCCCCcceeEEeCC-CCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccC---CCCC-cccCC
Q 007890 512 DPKKYNLVNPIMKNTVPVHR-YGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGE---LPSS-IKGCV 583 (586)
Q Consensus 512 ~~~~~n~~~p~~rDTv~vpp-~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~P~~-~~~C~ 583 (586)
...+|+.+|++|||+.|++ |+|++|||++||||.|+|||||+||++.||+++|.|+++++++ +|+. ...|.
T Consensus 414 -~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~ 489 (495)
T 3t6v_A 414 -NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCP 489 (495)
T ss_dssp -CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHH
T ss_pred -CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhh
Confidence 2457889999999999997 8999999999999999999999999999999999999998864 4544 56674
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=7.8e-96 Score=788.82 Aligned_cols=466 Identities=33% Similarity=0.573 Sum_probs=368.0
Q ss_pred EEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCC----CCeeEEecceeeccCCCCCCCCccc
Q 007890 43 RRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLT----ENVAIHWHGIRQIGTPWADGTEGVT 118 (586)
Q Consensus 43 ~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~----~~~siH~HGl~~~~~~~~DGv~~~~ 118 (586)
..|+|+|++..++|||+.+.+|+|||++|||+||+++||+|+|+|+|+|.. ++|||||||+++.+++|+||+++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999543 5899999999999899999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeeccccccccCcceEEEEEECCCCC-CCCCccc-ccceEEEEecccCCHHHHHhcc
Q 007890 119 QCPILPGETFTYKFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPEGE-SEPYAYD-YDRSIILNDWFHRSAFEQAAGL 195 (586)
Q Consensus 119 q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~d-~e~~l~l~d~~~~~~~~~~~~~ 195 (586)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+. ..++.+| +|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999 89999999999999999999999999987641 1124443 56899999999976532
Q ss_pred cCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCee
Q 007890 196 SSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNM 275 (586)
Q Consensus 196 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~ 275 (586)
.+ ..+..++++||||+++..|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 --~~-~~p~~~d~~liNG~~~~~~~~-----------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 218 (499)
T 3pxl_A 159 --GP-RFPGGADATLINGKGRAPSDS-----------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNL 218 (499)
T ss_dssp --SC-SSCSSCSEEEETTBCCCTTCT-----------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCE
T ss_pred --cc-CCCCCCcEEEECCCCcCCCCC-----------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeE
Confidence 11 114478999999998874421 2244689999999999999999999999999999999
Q ss_pred EEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCC
Q 007890 276 TVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSG 355 (586)
Q Consensus 276 ~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~ 355 (586)
+|||+||.+++|+.+++|.|+|||||||+|++++ ++|+|||++.....+..+......|+|+|.++.... +..
T Consensus 219 ~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~----- 291 (499)
T 3pxl_A 219 TIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE-PTT----- 291 (499)
T ss_dssp EEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCC-----
T ss_pred EEEEECCcccCceEeeeEEECCCcEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCCC-CCC-----
Confidence 9999999999999999999999999999999988 568999999876555433333458999998653221 111
Q ss_pred CCcCCccccccccccccccCC--CCC-CCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCC
Q 007890 356 PLWNDVGSRLNQSLAIKARKG--FII-PPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQ 432 (586)
Q Consensus 356 p~~~~~~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~ 432 (586)
+.........+ ..+.+... .+. ..+..+++++.+....+ + ..|+|||++|..|+.|.|.+...+.....
T Consensus 292 ~~~~~~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-- 363 (499)
T 3pxl_A 292 NQTTSVKPLNE--VDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGAQTAQ-- 363 (499)
T ss_dssp CCCCCSSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT--
T ss_pred CCCCCCccccc--ccccccccccCCCcccCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCCcccc--
Confidence 11111111111 12222211 011 12234677776655432 2 27999999999999999988764321100
Q ss_pred CCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEec---CCCCCCCCCCCCCccccCCCeEEEeeecCCCCC
Q 007890 433 TPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQN---ANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDI 509 (586)
Q Consensus 433 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N---~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~ 509 (586)
+. ...+.++.++.|++|||+|+| ...+ .||||||||+|+||+.+ |
T Consensus 364 ~~---------------------~~~~~v~~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~-g---- 411 (499)
T 3pxl_A 364 DL---------------------LPSGSVYVLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSA-G---- 411 (499)
T ss_dssp TS---------------------SSTTSEEEECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECT-T----
T ss_pred cc---------------------CCCceeEEecCCCEEEEEEecCcccCCC------CccceecCCcEEEEecc-C----
Confidence 00 012236899999999999994 4444 89999999999999763 2
Q ss_pred CCCCCCCCCCCCCcceeEEeCC---CCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccC---CCCC-cccC
Q 007890 510 YNDPKKYNLVNPIMKNTVPVHR---YGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGE---LPSS-IKGC 582 (586)
Q Consensus 510 ~~~~~~~n~~~p~~rDTv~vpp---~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~P~~-~~~C 582 (586)
...+|+.+|++|||+.||+ ++|++|||++||||.|+|||||+||++.||+++|.|+++++++ +|++ ...|
T Consensus 412 ---~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C 488 (499)
T 3pxl_A 412 ---STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLC 488 (499)
T ss_dssp ---CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHH
T ss_pred ---CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhh
Confidence 2457889999999999997 9999999999999999999999999999999999999998864 4543 5667
Q ss_pred C
Q 007890 583 V 583 (586)
Q Consensus 583 ~ 583 (586)
.
T Consensus 489 ~ 489 (499)
T 3pxl_A 489 P 489 (499)
T ss_dssp H
T ss_pred h
Confidence 4
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.4e-95 Score=790.93 Aligned_cols=475 Identities=31% Similarity=0.517 Sum_probs=366.2
Q ss_pred cccceEEEEEEEEEEeeCCCCc-eeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCC----CCeeEEecceeeccCCCCC
Q 007890 38 AEARIRRYKWEVKYEYKSPDCF-RKVVITINGRTPGPTIQARQNDTVIVELKNSLLT----ENVAIHWHGIRQIGTPWAD 112 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~dg~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~----~~~siH~HGl~~~~~~~~D 112 (586)
..+...+|+|++++..+.+||. .+.+|+|||++|||+||+++||+|+|+|+|+|.+ ++|||||||+++.+++|+|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 3456778999999999999999 9999999999999999999999999999999532 9999999999998889999
Q ss_pred CCCccccccCCCCCeEEEEEEc-CCCcceeeeccccccccCcceEEEEEECCCCCCCCCccc---ccceEEEEecccCCH
Q 007890 113 GTEGVTQCPILPGETFTYKFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYD---YDRSIILNDWFHRSA 188 (586)
Q Consensus 113 Gv~~~~q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~l~d~~~~~~ 188 (586)
|+++++||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ +.+..|| +|++|+|+||+++..
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSLS 177 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCCH
Confidence 9999999999999999999995 8999999999999999999999999998754 2233343 689999999999877
Q ss_pred HHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEE
Q 007890 189 FEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSF 268 (586)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~ 268 (586)
.++... .+.. .+.++++||||+++.+|.. .....+.++|++|++|||||||+|..+.+.|
T Consensus 178 ~~~~~~---~~~~-~~~~d~~liNG~~~~~~~~----------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~ 237 (521)
T 1v10_A 178 TVLFPN---PNKA-PPAPDTTLINGLGRNSANP----------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAF 237 (521)
T ss_dssp C----------CC-CSCCSEEEETTBCCCSSCG----------------GGSCCCEEEECTTCEEEEEEEECCSSCCEEE
T ss_pred HHHhhc---cCCC-CCCCCEEEECCcccCCCCC----------------CCCCceEEEECCCCEEEEEEEecCCcccEEE
Confidence 655321 1111 3468999999999875531 1123468999999999999999999999999
Q ss_pred EeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCC
Q 007890 269 QIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSP 348 (586)
Q Consensus 269 ~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~ 348 (586)
+|+||+|+|||+||++++|+.++++.|+|||||||+|++++ ++|+|||++.....+..+......++|+|++..... +
T Consensus 238 ~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p 315 (521)
T 1v10_A 238 SIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE-P 315 (521)
T ss_dssp EETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC-C
T ss_pred EECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC-C
Confidence 99999999999999999999999999999999999999987 568999999876443322222346999998654221 1
Q ss_pred CCCCCCCCCcCCccccccccccccccCC--CCC-CCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhc
Q 007890 349 PTTPPSGPLWNDVGSRLNQSLAIKARKG--FII-PPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKEN 425 (586)
Q Consensus 349 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~ 425 (586)
..... ....+ .+ ..+..... .+. ..+...++++.+....+ .....|+|||++|..+..|.|.+...+
T Consensus 316 ~~~~~---~~~~~---~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~--~~~~~~~iNg~~~~~~~~P~l~~~~~g 385 (521)
T 1v10_A 316 TTSQN---SGTAL---NE--ANLIPLINPGAPGNPVPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSG 385 (521)
T ss_dssp CCCCC---CSCBC---CG--GGCCBSSCCCCSSCSSTTCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHT
T ss_pred CCCCC---ccccc---ch--hhcccCCcccCCCcccCCcceEEEEEEEecC--CceeEEEECCCcccCCCCchhhhhhcC
Confidence 11100 00000 01 11222111 011 11123455554433211 122479999999999988988877533
Q ss_pred cccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecC
Q 007890 426 ITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEG 505 (586)
Q Consensus 426 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g 505 (586)
. +. +. + ...++.++.++.|++|||+++| .+ .||||||||+||||+++.+
T Consensus 386 ~---~~----~~-----~-----------~~~~~~~~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~~ 434 (521)
T 1v10_A 386 V---TN----PN-----D-----------LLPGGAVISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPGS 434 (521)
T ss_dssp C---CC----GG-----G-----------SSSTTTEEEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTTC
T ss_pred C---cc----cc-----c-----------CCCCceEEEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCCC
Confidence 1 10 00 0 0112345899999999999999 44 8999999999999998654
Q ss_pred CCCCCCCCCCCCCCCCCcceeEEe-CCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccC---CC-CCcc
Q 007890 506 KFDIYNDPKKYNLVNPIMKNTVPV-HRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGE---LP-SSIK 580 (586)
Q Consensus 506 ~~~~~~~~~~~n~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~P-~~~~ 580 (586)
. .+|+.+|.|||||.| |+++|++|||++||||.|+|||||+||++.|||++|.|+++++++ +| ...+
T Consensus 435 ~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~ 506 (521)
T 1v10_A 435 S--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDD 506 (521)
T ss_dssp S--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHT
T ss_pred C--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhh
Confidence 2 357889999999999 899999999999999999999999999999999999999988753 45 3488
Q ss_pred cCCC
Q 007890 581 GCVH 584 (586)
Q Consensus 581 ~C~~ 584 (586)
.|..
T Consensus 507 ~C~~ 510 (521)
T 1v10_A 507 LCPK 510 (521)
T ss_dssp HHHH
T ss_pred hchh
Confidence 8864
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2e-94 Score=792.10 Aligned_cols=483 Identities=30% Similarity=0.455 Sum_probs=376.9
Q ss_pred cccceEEEEEEEEEEe--eCCCCce-eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCC
Q 007890 38 AEARIRRYKWEVKYEY--KSPDCFR-KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGT 114 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~--~~~dg~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv 114 (586)
..+++++|+|++++.. +.+||.. +.+|+|||++|||+||+++||+|+|+|+|+|.+++|||||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4677899999999998 8999999 999999999999999999999999999999657899999999999888999999
Q ss_pred CccccccCCC-CCeEEEEEEcCCCcceeeeccccccccCcceEEEEEECCCCCCCCCcccccc-eEEEEecccCCHHHHH
Q 007890 115 EGVTQCPILP-GETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYDYDR-SIILNDWFHRSAFEQA 192 (586)
Q Consensus 115 ~~~~q~~i~p-G~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~l~d~~~~~~~~~~ 192 (586)
++++||+|+| |++|+|+|++.++||||||||.+.|+.+||+|+|||++++. ..||.|+ +|+|+||+++...++.
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~ 184 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLV 184 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHH
T ss_pred CccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHh
Confidence 9999999999 99999999999999999999999999999999999998753 3578887 9999999999987765
Q ss_pred hcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCC
Q 007890 193 AGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEG 272 (586)
Q Consensus 193 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g 272 (586)
.... .+ . ...++++||||+..+.|.. ....+.++|++|++|||||||+|..+.+.|+|+|
T Consensus 185 ~~~~-~~-~-~~~~d~~liNG~~~~~~~~-----------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~g 244 (559)
T 2q9o_A 185 HFTQ-NN-A-PPFSDNVLINGTAVNPNTG-----------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVN 244 (559)
T ss_dssp HHHT-TS-C-CCCBSEEEETTBCBCTTTC-----------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETT
T ss_pred hhhh-cC-C-CCccceeEECCccccCcCC-----------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEECC
Confidence 4322 11 1 4468999999999875532 1134589999999999999999999999999999
Q ss_pred CeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEe--ecCCCCCCCCCeEEEEEecCCCCCCCCCC
Q 007890 273 HNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNI--VSRNATFTTPPGLAILNYYPNHPKRSPPT 350 (586)
Q Consensus 273 h~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~--~~~~~~~~~~~~~ail~y~~~~~~~~~~~ 350 (586)
|+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.. ...|.........++|+|.+.... .|..
T Consensus 245 h~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~~ 322 (559)
T 2q9o_A 245 HTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPTD 322 (559)
T ss_dssp BCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCCC
T ss_pred CceEEEecCCcccCceEeCeEEEccEEEEEEEEECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCCC
Confidence 9999999999999999999999999999999999987 57899999987 444432334566899999864321 1111
Q ss_pred CCCCCCCcCCccccccccccccccCCCCC-CC--CCCCceEEEEEeeeecCCCeEEEEEcCccccCC-CCchHHHhhhcc
Q 007890 351 TPPSGPLWNDVGSRLNQSLAIKARKGFII-PP--PQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLP-HIPYLIALKENI 426 (586)
Q Consensus 351 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~-~~--p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p-~~p~l~~~~~~~ 426 (586)
.. .+.. +.....+ ..+....+... .+ ....+.++.+.... ...+...|+|||++|..+ ..|.|.+...+.
T Consensus 323 ~~--~~~~-~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~ 396 (559)
T 2q9o_A 323 EG--TPPV-DHQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN 396 (559)
T ss_dssp CC--CCCC-CCTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC
T ss_pred CC--CcCC-Ccccccc--cccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC
Confidence 10 0000 0000000 11111111000 01 11123455444321 122456899999999764 788887766432
Q ss_pred ccCCCCCCCCCCCCccccccccCcCCccccccceEEEec-CCCEEEEEEecCC----CCCCCCCCCCCccccCCCeEEEe
Q 007890 427 TSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLN-FNSTVDIILQNAN----SLSNKTSETHPWHLHGHDFWVLG 501 (586)
Q Consensus 427 ~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ve~~l~N~~----~~~~~~~~~HP~HlHG~~F~Vl~ 501 (586)
. .| + .+..++.++ .+++++|+++|.+ .+ .||||||||+||||+
T Consensus 397 ~-~~----~---------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~ 444 (559)
T 2q9o_A 397 T-SY----P---------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLG 444 (559)
T ss_dssp C-CC----C---------------------GGGCEEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEE
T ss_pred c-cC----C---------------------CCceEEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEe
Confidence 1 11 0 012236665 4678889999865 44 899999999999999
Q ss_pred eec---------CCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccc
Q 007890 502 YGE---------GKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERL 572 (586)
Q Consensus 502 ~g~---------g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~ 572 (586)
++. |.|++..+...+|+.+|.|||||.||+++|++|||++||||.|||||||+||++.|||++|.|+++++
T Consensus 445 ~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~ 524 (559)
T 2q9o_A 445 RSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL 524 (559)
T ss_dssp ESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH
T ss_pred cccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchh
Confidence 987 56653322356889999999999999999999999999999999999999999999999999999888
Q ss_pred cCCC-----C-CcccCCC
Q 007890 573 GELP-----S-SIKGCVH 584 (586)
Q Consensus 573 ~~~P-----~-~~~~C~~ 584 (586)
++++ + ..++|.+
T Consensus 525 ~~~~~~~~p~~~~~~C~~ 542 (559)
T 2q9o_A 525 RQRISQEDEDDFNRVCDE 542 (559)
T ss_dssp GGGCCHHHHHHHHHHHHH
T ss_pred hhccccCCchhhhhhccc
Confidence 7643 2 4678863
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.3e-92 Score=767.71 Aligned_cols=464 Identities=33% Similarity=0.594 Sum_probs=362.8
Q ss_pred EEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCC----CCeeEEecceeeccCCCCCCCCccc
Q 007890 43 RRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLT----ENVAIHWHGIRQIGTPWADGTEGVT 118 (586)
Q Consensus 43 ~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~----~~~siH~HGl~~~~~~~~DGv~~~~ 118 (586)
.+|+|++++..+.+||..+.+|+|||++ ||+||+++||+|+|+|+|+|.+ ++|||||||+++.+++|+||+++++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 3699999999999999999999999999 9999999999999999999532 9999999999998889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeeccccccccCcceEEEEEECCCCCCCCCccc---ccceEEEEecccCCHHHHHhc
Q 007890 119 QCPILPGETFTYKFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYD---YDRSIILNDWFHRSAFEQAAG 194 (586)
Q Consensus 119 q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~l~d~~~~~~~~~~~~ 194 (586)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ +.+..|+ +|++|+|+||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ-- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC--
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc--
Confidence 9999999999999995 8999999999999999999999999998754 2233343 6899999999998875431
Q ss_pred ccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCe
Q 007890 195 LSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHN 274 (586)
Q Consensus 195 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~ 274 (586)
+ .+.++++||||++.++|.. ....+.++|++|++|||||||+|..+.+.|+|+||+
T Consensus 161 ----~---~~~~d~~liNG~~~~~~~~-----------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~ 216 (503)
T 1hfu_A 161 ----G---AAQPDATLINGKGRYVGGP-----------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHE 216 (503)
T ss_dssp ----------CCSEEEETTBCCBTTCC-----------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred ----C---CCCCCEEEECcccccCCCC-----------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCce
Confidence 1 1368999999999876642 223468999999999999999999999999999999
Q ss_pred eEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC----CCCCCeEEEEEecCCCCCCCCCC
Q 007890 275 MTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT----FTTPPGLAILNYYPNHPKRSPPT 350 (586)
Q Consensus 275 ~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~----~~~~~~~ail~y~~~~~~~~~~~ 350 (586)
|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.....+.. +......++|+|.+.....+...
T Consensus 217 ~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~ 295 (503)
T 1hfu_A 217 LTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS 295 (503)
T ss_dssp EEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCC
T ss_pred EEEEeccCccccccccCeEEEcccceEEEEEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999987 56899999976533221 11223479999986542211111
Q ss_pred CCCCCCCcCCccccccccccccccCC--CCC-CCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccc
Q 007890 351 TPPSGPLWNDVGSRLNQSLAIKARKG--FII-PPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENIT 427 (586)
Q Consensus 351 ~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~ 427 (586)
. .|....+. + ..+..... .+. ..+...+.++.+....+ +. .|+|||++|..+..|.|.+...+
T Consensus 296 ~---~~~~~~l~---~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~---~~-~~~iNg~~~~~~~~P~l~~~~~g-- 361 (503)
T 1hfu_A 296 A---NPNPAQLN---E--ADLHALIDPAAPGIPTPGAADVNLRFQLGFS---GG-RFTINGTAYESPSVPTLLQIMSG-- 361 (503)
T ss_dssp C---CSSCCBCC---G--GGCBBSSSCSCSSCSSTTCSSEEEECCEEEE---TT-EEEETTBCCCCCSSCHHHHHHTT--
T ss_pred C---CCccCCCc---c--ccccccCccCCCCcccCCcceEEEEEEeecc---Cc-eEEECCCccCCCCCcchhhhhcC--
Confidence 1 11111110 0 11221111 011 11123455554433222 22 79999999999988988877532
Q ss_pred cCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEec-CCCCCCCCCCCCCccccCCCeEEEeeecCC
Q 007890 428 SAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQN-ANSLSNKTSETHPWHLHGHDFWVLGYGEGK 506 (586)
Q Consensus 428 ~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N-~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 506 (586)
.+. +. ....++.++.++.|++|||+++| ...+ .||||||||+||||+++.+.
T Consensus 362 -~~~----~~----------------~~~~~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 362 -AQS----AN----------------DLLPAGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp -CCS----GG----------------GSSSTTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC
T ss_pred -Ccc----cc----------------cCCCCceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC
Confidence 110 00 01122446899999999999995 4444 89999999999999986542
Q ss_pred CCCCCCCCCCCCCCCCcceeEEe-CCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecccccccC---CC-CCccc
Q 007890 507 FDIYNDPKKYNLVNPIMKNTVPV-HRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIERLGE---LP-SSIKG 581 (586)
Q Consensus 507 ~~~~~~~~~~n~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~P-~~~~~ 581 (586)
.+|+.+|.|||||.| |+++|++|||++||||.|+|||||+||++.|||++|.|+++++++ +| ...+.
T Consensus 415 --------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~ 486 (503)
T 1hfu_A 415 --------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQL 486 (503)
T ss_dssp --------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHH
T ss_pred --------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhh
Confidence 357789999999999 999999999999999999999999999999999999999887753 45 34788
Q ss_pred CCC
Q 007890 582 CVH 584 (586)
Q Consensus 582 C~~ 584 (586)
|+.
T Consensus 487 C~~ 489 (503)
T 1hfu_A 487 CEI 489 (503)
T ss_dssp HHH
T ss_pred ccc
Confidence 863
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.3e-85 Score=702.08 Aligned_cols=406 Identities=25% Similarity=0.348 Sum_probs=324.3
Q ss_pred cccceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcc
Q 007890 38 AEARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGV 117 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~ 117 (586)
+.+.+++|+|++++..+.+||..+.+|+|||++|||+|++++||+|+|+|+|+ ++++|+|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~-- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENR-LPEPTNLHWHGLPIS--PKVDDPF-- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEEC-SSSCBCCEEETCCCC--TTTSCTT--
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEEC-CCCCcceEeCCCCCC--ccccCCc--
Confidence 45678999999999999999999999999999999999999999999999999 689999999999986 5899986
Q ss_pred ccccCCCCCeEEEEEEc--CCCcceeeeccc----cccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHH
Q 007890 118 TQCPILPGETFTYKFVV--DRPGTYLYHAHY----GMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQ 191 (586)
Q Consensus 118 ~q~~i~pG~~~~Y~f~~--~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~ 191 (586)
+.|+||++|+|+|++ +++||||||||. +.|+.+||+|+|||+++.++.....+++|++|+|+||+++... .
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-P 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-E
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-c
Confidence 469999999999998 479999999995 6799999999999998754222234578999999999987631 0
Q ss_pred HhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeC
Q 007890 192 AAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIE 271 (586)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~ 271 (586)
.............++.++|||+..+ .++|++| +|||||||+|..+.+.|+|+
T Consensus 164 -~~~~~~~~~~g~~~~~~~iNG~~~p--------------------------~l~v~~g-~~RlRliN~~~~~~~~~~i~ 215 (439)
T 2xu9_A 164 -APHTPMDWMNGKEGDLVLVNGALRP--------------------------TLVAQKA-TLRLRLLNASNARYYRLALQ 215 (439)
T ss_dssp -CCCCHHHHHHCCCCSEEEETTEESC--------------------------EEECSSS-EEEEEEEECCSSCCEEEEET
T ss_pred -CCCCccccccCCCCCEEEECCccCC--------------------------cEEecCC-eEEEEEEecCCCceEEEEEC
Confidence 0000000000235789999999876 7999999 99999999999999999999
Q ss_pred CCeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC---------------CCCCCeEE
Q 007890 272 GHNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT---------------FTTPPGLA 335 (586)
Q Consensus 272 gh~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~---------------~~~~~~~a 335 (586)
||+|+||+.||+++ +|+.++++.|+|||||||+|++++ +|+|||++....++.. .......+
T Consensus 216 gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (439)
T 2xu9_A 216 DHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLL 293 (439)
T ss_dssp TBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEE
T ss_pred CceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC--CceEEEEecccccCCccccccccccccccCCCCCcceeE
Confidence 99999999999998 899999999999999999999988 6899999875433210 01234678
Q ss_pred EEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCC
Q 007890 336 ILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPH 415 (586)
Q Consensus 336 il~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~ 415 (586)
+++|.+.... .. +|.. +....+ .+....++++.+..... + ..|.|||++|..+.
T Consensus 294 ~l~~~~~~~~----~~---~p~~------------l~~~~~---l~~~~~~r~~~l~~~~~---g-~~~~iNg~~~~~~~ 347 (439)
T 2xu9_A 294 YLIAPKNPKP----LP---LPKA------------LSPFPT---LPAPVVTRRLVLTEDMM---A-ARFFINGQVFDHRR 347 (439)
T ss_dssp EEEECSSCCC----CC---CCSC------------CCCCCC---CCCCSEEEEEEEEEEGG---G-TEEEETTBCCCTTC
T ss_pred EEEecCCCcc----cc---Cccc------------CCCccc---CCCCCcceEEEEEeecc---C-ceEeECCEECCCCC
Confidence 8998753311 01 1110 000111 11112246666654431 1 37999999874321
Q ss_pred CchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCC
Q 007890 416 IPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGH 495 (586)
Q Consensus 416 ~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~ 495 (586)
.+ +.++.|++|+|+|.|.+.+ .||||||||
T Consensus 348 -------------------~~-------------------------~~~~~g~~~~~~~~N~~~~------~HP~HLHG~ 377 (439)
T 2xu9_A 348 -------------------VD-------------------------LKGQAQTVEVWEVENQGDM------DHPFHLHVH 377 (439)
T ss_dssp -------------------CC-------------------------EEECTTCEEEEEEEECSSS------CEEEEESSC
T ss_pred -------------------Cc-------------------------eecCCCCEEEEEEEcCCCC------CCCceeCCC
Confidence 11 6789999999999998876 899999999
Q ss_pred CeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecc
Q 007890 496 DFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 496 ~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+||||+++.+.+ .+|.|||||.|+|+++++|||++||||.|+|||||+||++.|||++|.++
T Consensus 378 ~F~Vl~~~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 378 PFQVLSVGGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CBEEEEETTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred cEEEEeeCCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999865443 36899999999999999999999999999999999999999999999874
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.7e-84 Score=694.48 Aligned_cols=405 Identities=19% Similarity=0.133 Sum_probs=319.3
Q ss_pred eEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccc
Q 007890 42 IRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQC 120 (586)
Q Consensus 42 ~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~ 120 (586)
.++|+|++++..+++ ||..+.+|+|||++|||+||+++||+|+|+|+|+ ++++|||||||+++.++ +||++ ||
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNR-LTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEEC-CCCCccEEECCccCCCC--CCCCC---cC
Confidence 578999999999887 8999999999999999999999999999999999 68999999999999854 99998 89
Q ss_pred cCCCCCeEEEEEEcCC-Ccceeeeccc----cccccCcceEEEEEECCCCCCC--CCcc-cccceEEEEecccCCHHHHH
Q 007890 121 PILPGETFTYKFVVDR-PGTYLYHAHY----GMQREAGLYGSIRVSLPEGESE--PYAY-DYDRSIILNDWFHRSAFEQA 192 (586)
Q Consensus 121 ~i~pG~~~~Y~f~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~--p~~~-d~e~~l~l~d~~~~~~~~~~ 192 (586)
+|+||++|+|+|++.+ +||||||||. +.|+.+||+|+|||+++++... |..| ++|++|+|+||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999965 9999999997 7899999999999999764222 3345 78999999999998664432
Q ss_pred hcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEe-C
Q 007890 193 AGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQI-E 271 (586)
Q Consensus 193 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i-~ 271 (586)
... .... ...++++||||+..+ .++|++| +|||||||+|..+.+.|+| +
T Consensus 172 ~~~--~~~~-~~~~d~~liNG~~~p--------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~d 221 (451)
T 2uxt_A 172 YNE--PGSG-GFVGDTLLVNGVQSP--------------------------YVEVSRG-WVRLRLLNASNSRRYQLQMND 221 (451)
T ss_dssp CCC--CSSS-CCCCSEEEETTEESC--------------------------EEEECSS-EEEEEEEECCSSCCEEEEETT
T ss_pred ccc--ccCC-CCcCCEEEECCcccc--------------------------eEEecCC-EEEEEEEccCCceeEEEEECC
Confidence 211 1111 346899999999887 7999999 9999999999999999999 8
Q ss_pred CCeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC--------CCCCCeEEEEEecCC
Q 007890 272 GHNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT--------FTTPPGLAILNYYPN 342 (586)
Q Consensus 272 gh~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~--------~~~~~~~ail~y~~~ 342 (586)
||+|+|||+||+++ +|+.++++.|+|||||||+|++++ +++|||++.....+.+ .......++++|...
T Consensus 222 g~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~ 299 (451)
T 2uxt_A 222 GRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPT 299 (451)
T ss_dssp SCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEEC
T ss_pred CCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEec
Confidence 99999999999998 899999999999999999999997 6899999766443211 012234678888754
Q ss_pred CCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHh
Q 007890 343 HPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIAL 422 (586)
Q Consensus 343 ~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~ 422 (586)
....... ..+|. .+.+... ...+...++++.+. + .|+|||++|..+.
T Consensus 300 ~~~~~~~---~~~p~------------~L~~~~~--~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~------- 346 (451)
T 2uxt_A 300 GLLPLVT---DSLPM------------RLLPTEI--MAGSPIRSRDISLG-------D--DPGINGQLWDVNR------- 346 (451)
T ss_dssp SCCC-------CCCS------------CSSSSCC--CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC-------
T ss_pred CCCcCcc---ccCcc------------ccCCCCC--CCCCCcceEEEEEe-------e--EEEECCEeCCCCC-------
Confidence 3211111 11111 0111111 01122223444332 1 5899999875321
Q ss_pred hhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEee
Q 007890 423 KENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGY 502 (586)
Q Consensus 423 ~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~ 502 (586)
+ .+.++.|++|+|+|+|. + .||||||||+||||++
T Consensus 347 -------------~------------------------~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~ 381 (451)
T 2uxt_A 347 -------------I------------------------DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNV 381 (451)
T ss_dssp -------------C------------------------CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEE
T ss_pred -------------C------------------------cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEee
Confidence 1 17889999999999997 4 7999999999999998
Q ss_pred ecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCcee----eEEeecchhhhhcCceEEEeccccccc
Q 007890 503 GEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGA----WAFHCHIESHFYMGMGVVFAEGIERLG 573 (586)
Q Consensus 503 g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~~~~~~~~ 573 (586)
+.. .+++.+|.|||||.| +++++|+|++||||. |||||||++|+|.|||++|.+.+.+++
T Consensus 382 ~G~---------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 382 NGA---------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp TTB---------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred CCc---------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 532 245567999999999 899999999999888 999999999999999999999887765
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=5.7e-82 Score=687.70 Aligned_cols=423 Identities=18% Similarity=0.185 Sum_probs=320.0
Q ss_pred ccceEEEEEEEEEE--eeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc
Q 007890 39 EARIRRYKWEVKYE--YKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 39 ~~~~~~~~l~~~~~--~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
+..+++|+|++++. .+.+||..+.+|+|||++|||+|++++||+|+|+|+|+ ++++|||||||+++. +++||++
T Consensus 33 g~~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~~- 108 (534)
T 3abg_A 33 GQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINN-AEAPNSVHLHGSFSR--AAFDGWA- 108 (534)
T ss_dssp SSCCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEEC-SSSCBCEEEETCCCC--TTTTTCS-
T ss_pred CCceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEEC-CCCCceEEECCCcCC--CCCCCCC-
Confidence 34468899999964 46789999999999999999999999999999999999 789999999999986 4699985
Q ss_pred cccccCCCCCeEEEEEEcC-CCcceeeecccc----ccccCcceEEEEEECCCCCCCCC--cc-cccceEEEEecccCCH
Q 007890 117 VTQCPILPGETFTYKFVVD-RPGTYLYHAHYG----MQREAGLYGSIRVSLPEGESEPY--AY-DYDRSIILNDWFHRSA 188 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~-~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~p~--~~-d~e~~l~l~d~~~~~~ 188 (586)
||+|+||++|+|+|++. ++||||||||.. .|+.+||+|+|||+++.+...++ .| +.|++|+|+||+++..
T Consensus 109 --~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~ 186 (534)
T 3abg_A 109 --EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTAN 186 (534)
T ss_dssp --SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSS
T ss_pred --CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCC
Confidence 79999999999999995 579999999964 57889999999999987643332 23 6789999999998765
Q ss_pred HHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEE
Q 007890 189 FEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSF 268 (586)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~ 268 (586)
.++... .+......++.+||||+.++ .+.|++ ++|||||||+|..+.+.|
T Consensus 187 g~~~~~---~~~~~~~~gd~~lvNG~~~p--------------------------~~~v~~-~~~RlRliNa~~~~~~~l 236 (534)
T 3abg_A 187 GNLVTT---NGELNSFWGDVIHVNGQPWP--------------------------FKNVEP-RKYRFRFLDAAVSRSFGL 236 (534)
T ss_dssp SCBCCC---TTCSSCCCCSEEEETTEESC--------------------------BCBCCS-SEEEEEEEECCSSCCEEE
T ss_pred Cceecc---CCCCccccCceeccCCccCc--------------------------eEEecC-cEEEEEEEecCCcceEEE
Confidence 433221 11111235789999999887 577887 589999999999999999
Q ss_pred EeCC-------CeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEee-cCCCC--CCCCCeEEEE
Q 007890 269 QIEG-------HNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIV-SRNAT--FTTPPGLAIL 337 (586)
Q Consensus 269 ~i~g-------h~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~-~~~~~--~~~~~~~ail 337 (586)
+|++ |+|+|||+||+++ +|+.++.|.|+|||||||+|++++.++.+|+|++... ..+.. .......+++
T Consensus 237 ~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il 316 (534)
T 3abg_A 237 YFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVM 316 (534)
T ss_dssp EECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEE
T ss_pred EEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeE
Confidence 9987 9999999999854 8999999999999999999999984334699997442 11211 0112346889
Q ss_pred EecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCc
Q 007890 338 NYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIP 417 (586)
Q Consensus 338 ~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p 417 (586)
+|....... .......|. .+..... +.++...++++.+.. ....|+|||++|..+..|
T Consensus 317 ~~~~~~~~~--~~~~~~~P~------------~L~~~~~--p~~~~~~~~~~~~~~------~~~~w~iNG~~f~~~~~p 374 (534)
T 3abg_A 317 RFVVADDTT--QPDTSVVPA------------NLRDVPF--PSPTTNTPRQFRFGR------TGPTWTINGVAFADVQNR 374 (534)
T ss_dssp EEECCCCSS--CSCCCCCCC------------CCCCCSC--CCCCCCCCEEEECSC------CCSTTCCCCBTTBCTTSC
T ss_pred EEecCCCCc--CCCCCCCcc------------ccccCCC--CCCccccceEEEEec------cCceeEECCcccCCCCCc
Confidence 987433210 000000111 1111100 112223455554421 112599999988543211
Q ss_pred hHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCe
Q 007890 418 YLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDF 497 (586)
Q Consensus 418 ~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F 497 (586)
. . +.++.|++|+|+|+|.+.+ +.||||||||+|
T Consensus 375 ~------------------l------------------------~~v~~G~~~~w~i~N~~~~-----~~HP~HLHG~~F 407 (534)
T 3abg_A 375 L------------------L------------------------ANVPVGTVERWELINAGNG-----WTHPIHIHLVDF 407 (534)
T ss_dssp C------------------C------------------------CEECTTCEEEEEEEECSSS-----CCCCEEESSCCE
T ss_pred c------------------e------------------------eeccCCCEEEEEEEcCCCC-----CCcCEEECCeeE
Confidence 1 1 5678999999999997632 289999999999
Q ss_pred EEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE-eCCceeeEEeecchhhhhcCceEEEeccccc
Q 007890 498 WVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFR-ADNPGAWAFHCHIESHFYMGMGVVFAEGIER 571 (586)
Q Consensus 498 ~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~~~~~~ 571 (586)
|||+++.|.+.. ...++++ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.+.+.+
T Consensus 408 ~Vl~~~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 408 KVISRTSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEESSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEcCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999996654321 2244555 8999999999999999999 8999999999999999999999999776543
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.1e-80 Score=666.53 Aligned_cols=412 Identities=24% Similarity=0.352 Sum_probs=315.4
Q ss_pred ccccceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC
Q 007890 37 MAEARIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE 115 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~ 115 (586)
.+.+.+++|+|++++..+.. +|..+.+|+|||++|||+||+++||+|+|+|+|+ ++++|||||||++++ +++||++
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~p 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNK-LKEATTIHWHGVPVP--PDQDGSP 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--GGGSCCT
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeC-CCCCeeEEecCcccC--CccCCCc
Confidence 36778999999999999985 7999999999999999999999999999999999 789999999999985 6899996
Q ss_pred ccccccCCCCCeEEEEEEcCC--Ccceeeeccc----cccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHH
Q 007890 116 GVTQCPILPGETFTYKFVVDR--PGTYLYHAHY----GMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAF 189 (586)
Q Consensus 116 ~~~q~~i~pG~~~~Y~f~~~~--~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~ 189 (586)
||+|+||++|+|+|++.+ +||||||||. +.|+.+||+|+|||+++++ .++.+++++ |+|+||+++...
T Consensus 122 ---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~--~~~~~~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 ---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKD--ALSHLKEKD-LMISDLRLDENA 195 (481)
T ss_dssp ---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSC--TTTTSEEEE-EEEEEECCBTTS
T ss_pred ---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccc--cccCCCcee-EEEEEEeccCCC
Confidence 899999999999999955 8999999994 7899999999999999865 234455565 999999987653
Q ss_pred HHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEE
Q 007890 190 EQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQ 269 (586)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~ 269 (586)
++....... ......++.++|||+..+ .++|++|+ ||||||+|..+.+.|+
T Consensus 196 ~~~~~~~~~-~~~g~~gd~~lvNG~~~p--------------------------~l~v~~g~--RlRliNa~~~~~~~l~ 246 (481)
T 3zx1_A 196 QIPNNNLND-WLNGREGEFVLINGQFKP--------------------------KIKLATNE--RIRIYNATAARYLNLR 246 (481)
T ss_dssp CCCCCCHHH-HHHCCCCSEEEETTEESC--------------------------EEEEETTE--EEEEEECCSSCCEEEE
T ss_pred ccccccchh-hccCCcCCEEEECCccCc--------------------------eEEecCCC--EEEEEecCCCeEEEEE
Confidence 321000000 000235789999999876 79999998 9999999999999999
Q ss_pred eCCCeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC-C-CCCCeEEEEEecCCCCCC
Q 007890 270 IEGHNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT-F-TTPPGLAILNYYPNHPKR 346 (586)
Q Consensus 270 i~gh~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~-~-~~~~~~ail~y~~~~~~~ 346 (586)
|+||+|+|||+||+++ +|+.++++.|+|||||||+|++++ +++|.|.+....+... . .......++++......
T Consensus 247 i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 323 (481)
T 3zx1_A 247 IQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN- 323 (481)
T ss_dssp ETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-
T ss_pred ECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCCC-
Confidence 9999999999998776 899999999999999999999987 6789888754433211 0 11233445554422110
Q ss_pred CCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCC-----Ce--------EEEEEcCccccC
Q 007890 347 SPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVS-----GN--------VRWSVNKVTYTL 413 (586)
Q Consensus 347 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----g~--------~~~~iNg~~~~~ 413 (586)
. .+|. .+... +..+....++++.+........ +. ..|+|||+.|..
T Consensus 324 ---~---~lP~------------~l~~~---~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~ 382 (481)
T 3zx1_A 324 ---V---ELPK------------NLKIF---KPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL 382 (481)
T ss_dssp ---C---CCCS------------CSCCC---CCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT
T ss_pred ---c---cCCc------------cccCC---CCCCCCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC
Confidence 1 1111 01111 1111112345555432211000 01 139999986631
Q ss_pred CCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCcccc
Q 007890 414 PHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLH 493 (586)
Q Consensus 414 p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlH 493 (586)
.. |. +.++.|++|+|+|.|.+.+ .||||||
T Consensus 383 -------------------~~-~~------------------------~~~~~G~~v~w~l~N~~~~------~Hp~HlH 412 (481)
T 3zx1_A 383 -------------------KR-ID------------------------LSSKLGVVEDWIVINKSHM------DHPFHIH 412 (481)
T ss_dssp -------------------TC-CC------------------------EEEETTCCEEEEEEECSSS------CEEEEET
T ss_pred -------------------CC-ce------------------------EEeCCCCEEEEEEEcCCCC------ceeEEEe
Confidence 11 11 7899999999999998766 9999999
Q ss_pred CCCeEEEeee-cCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEecc
Q 007890 494 GHDFWVLGYG-EGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 494 G~~F~Vl~~g-~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
||.|+|+++. +|.. ....++.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||..|.|.
T Consensus 413 G~~F~vl~~~~~g~~--------~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 413 GTQFELISSKLNGKV--------QKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp TCCEEEEEEEETTEE--------EECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ccEEEEEEecccCCC--------CCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 9999999983 2211 11235789999999999999999999999999999999999999999999874
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.8e-80 Score=674.40 Aligned_cols=432 Identities=18% Similarity=0.197 Sum_probs=318.7
Q ss_pred ceEEEEEEEEEEee--CCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCC---------------------CCee
Q 007890 41 RIRRYKWEVKYEYK--SPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLT---------------------ENVA 97 (586)
Q Consensus 41 ~~~~~~l~~~~~~~--~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~---------------------~~~s 97 (586)
...+|+|++++... .+++..+.+|+|||++|||+|++++||+|+|+|+|+|.. ++||
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 34558899988765 456779999999999999999999999999999999643 2999
Q ss_pred EEecceeeccCCCCCCCCc--cccccCCCCCeE---EEEEEc-CCCcceeeecccc----ccccCcceEEEEEECCCCCC
Q 007890 98 IHWHGIRQIGTPWADGTEG--VTQCPILPGETF---TYKFVV-DRPGTYLYHAHYG----MQREAGLYGSIRVSLPEGES 167 (586)
Q Consensus 98 iH~HGl~~~~~~~~DGv~~--~~q~~i~pG~~~---~Y~f~~-~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 167 (586)
|||||+++. +++||+++ ++||+|+||++| +|+|++ +++||||||||.. .|+.+||+|+|||+++.+..
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999987 67999996 689999999555 999998 5799999999964 48999999999999976532
Q ss_pred CCC-cccccceEEEEecccCCHHHHHhcccC---------CCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCC
Q 007890 168 EPY-AYDYDRSIILNDWFHRSAFEQAAGLSS---------IPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETN 237 (586)
Q Consensus 168 ~p~-~~d~e~~l~l~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~ 237 (586)
.++ .+|+|++|+|+||+++...++...... ........++++||||+.++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p-------------------- 241 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-------------------- 241 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC--------------------
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc--------------------
Confidence 222 358899999999998776443222100 00011346799999999987
Q ss_pred CCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCC-eeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCce
Q 007890 238 PECSPYVITVIPGKTYRLRISSLTALSALSFQIEGH-NMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNY 315 (586)
Q Consensus 238 ~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh-~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y 315 (586)
.+.|+++ +|||||||+|..+.+.|+|++| +|+|||+||+++ +|+.++++.|+|||||||+|++++ .+|+
T Consensus 242 ------~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~g~- 312 (513)
T 2wsd_A 242 ------YLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTA-YEGE- 312 (513)
T ss_dssp ------EEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGG-GTTC-
T ss_pred ------eEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCC-CCCc-
Confidence 6888875 8999999999999999999999 999999999998 899999999999999999999987 3465
Q ss_pred EEEEEeecCCCC-CCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEee
Q 007890 316 WATTNIVSRNAT-FTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNT 394 (586)
Q Consensus 316 ~l~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 394 (586)
+++......|.. +......++++|........+. ....|.. +..... .+..+...++++.+...
T Consensus 313 ~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~--~~~~p~~------------l~~~~~-~~~~~~~~~~~~~l~~~ 377 (513)
T 2wsd_A 313 SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKD--ESRKPKY------------LASYPS-VQHERIQNIRTLKLAGT 377 (513)
T ss_dssp EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCC--CCCCCSB------------CSCCGG-GCCCCEEEEEEEEEEEE
T ss_pred EEEEEecccccccCCCCCCcceEEEEeccCcccCc--cCCCCcc------------ccCCCC-cccCCCcceEEEEEEee
Confidence 333333222211 1223446789997543111110 0111110 000000 01111223566655543
Q ss_pred eecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEE
Q 007890 395 QNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIIL 474 (586)
Q Consensus 395 ~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l 474 (586)
... .+...|.|||++|..+ + .+.++.|++|+|+|
T Consensus 378 ~~~-~g~~~~~iNg~~~~~~---------------------~------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 378 QDE-YGRPVLLLNNKRWHDP---------------------V------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp ECT-TSCEEEEETTBCTTSC---------------------C------------------------CBCCBTTCEEEEEE
T ss_pred cCC-CCCceEeECCccCCCc---------------------c------------------------cEecCCCCEEEEEE
Confidence 322 3456799999977421 0 04668999999999
Q ss_pred ecCCCCCCCCCCCCCccccCCCeEEEeeecC---CCCCCC------CCCCCCCCCCCcceeEEeCCCCEEEEEEEe-CCc
Q 007890 475 QNANSLSNKTSETHPWHLHGHDFWVLGYGEG---KFDIYN------DPKKYNLVNPIMKNTVPVHRYGWTALRFRA-DNP 544 (586)
Q Consensus 475 ~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~n~~~p~~rDTv~vpp~g~v~irf~a-dnp 544 (586)
+|.+.+ .||||||||+||||+++.+ .|++.. .+......++.|||||.|+|+++++|+|++ |||
T Consensus 412 ~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp 485 (513)
T 2wsd_A 412 INPTRG------THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS 485 (513)
T ss_dssp EECSSS------CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC
T ss_pred EcCCCC------CcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC
Confidence 998766 8999999999999998752 121110 001112234569999999999999999988 899
Q ss_pred eeeEEeecchhhhhcCceEEEecccc
Q 007890 545 GAWAFHCHIESHFYMGMGVVFAEGIE 570 (586)
Q Consensus 545 G~w~~HCHil~H~d~GM~~~~~~~~~ 570 (586)
|.|+|||||+||++.|||+.|.+.++
T Consensus 486 G~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 486 GRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp EEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred CCEEEEcCChhhhhcCCceeEEEeCC
Confidence 99999999999999999999988753
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.2e-81 Score=670.91 Aligned_cols=384 Identities=22% Similarity=0.302 Sum_probs=299.9
Q ss_pred EEECCC-CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcC-CCccee
Q 007890 64 ITINGR-TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVD-RPGTYL 141 (586)
Q Consensus 64 ~~~Ng~-~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~-~~Gt~w 141 (586)
|+|||+ +|||+||+++||+|+|+|+|+ ++++|||||||++++ +++||+++ |+|+||++|+|+|++. ++||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~w 101 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNK-LTEPTIVHWHGFDVN--WHNDAHPS---FAITPGESYNYSFDVVNRAGTYL 101 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCC--HHHHTCGG---GCBCTTCEEEEEEECCSCSEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEEC-CCCceeEEeCCccCC--CccCCCCC---ccCCCCCEEEEEEEcCCCCCceE
Confidence 999999 999999999999999999999 689999999999986 57999997 9999999999999996 899999
Q ss_pred eecc----ccccccCcceEEEEEECCCCCCCCCccc-ccceEEEEecccCCHHHHHhcccC-CCCCCCCCCcceeecCCC
Q 007890 142 YHAH----YGMQREAGLYGSIRVSLPEGESEPYAYD-YDRSIILNDWFHRSAFEQAAGLSS-IPFQWVGEPQSLLIQGKG 215 (586)
Q Consensus 142 YH~H----~~~q~~~Gl~G~liV~~~~~~~~p~~~d-~e~~l~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~liNG~~ 215 (586)
|||| ++.|+.+||+|+|||+++++. .++.|| +|++|+|+||+++. .++.. ... ........++.++|||+.
T Consensus 102 YH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~-~~~~~~~~~~~~~~~~liNG~~ 178 (448)
T 3aw5_A 102 YHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY-NPTPMEMIAGFLGNAVLVNGVK 178 (448)
T ss_dssp EEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-CCCHHHHHHCCCCSEEEETTEE
T ss_pred eccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-cccccccccCccccEEEECCcc
Confidence 9999 889999999999999998763 344577 89999999999876 43221 000 000012367999999998
Q ss_pred CCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEe--CC---CeeEEEecCCcccc-ceE
Q 007890 216 RFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQI--EG---HNMTVVEADGHNVE-PFV 289 (586)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i--~g---h~~~via~DG~~~~-P~~ 289 (586)
.+ .++|++| +|||||||+|..+.+.|+| +| |+|+|||+||++++ |+.
T Consensus 179 ~p--------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~ 231 (448)
T 3aw5_A 179 DA--------------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIE 231 (448)
T ss_dssp TC--------------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEE
T ss_pred cc--------------------------eEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceE
Confidence 86 7999999 9999999999999999999 99 99999999999997 999
Q ss_pred EeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC-----------CCCCCeEEEEEecCCCCCCCCCCCCCCCCCc
Q 007890 290 VQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT-----------FTTPPGLAILNYYPNHPKRSPPTTPPSGPLW 358 (586)
Q Consensus 290 ~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~-----------~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~ 358 (586)
++++.|+|||||||+|++++ +.|||++.....+.+ .......++++|.+...... +..++
T Consensus 232 ~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~L~-- 302 (448)
T 3aw5_A 232 VRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP----VEALS-- 302 (448)
T ss_dssp ESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC----CCCCS--
T ss_pred eceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC----ccccC--
Confidence 99999999999999999984 589999876543211 11234567788864322111 00011
Q ss_pred CCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCC
Q 007890 359 NDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDG 438 (586)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~ 438 (586)
..+. ...+...++++.+... . ..|+|||++|..+ .|.
T Consensus 303 --------------~lp~--~~~~~~~~~~~~l~~~--~----~~~~iNg~~~~~~--------------------~p~- 339 (448)
T 3aw5_A 303 --------------DPPP--EPPKPTRTRRFALSLS--G----MQWTINGMFWNAS--------------------NPL- 339 (448)
T ss_dssp --------------CCCC--CCCCCSEEEEEEEEEE--T----TEEEETTBCCCTT--------------------CTT-
T ss_pred --------------CCCC--CCCCCCceEEEEEeCC--C----ceeeECCCcCCCC--------------------CCc-
Confidence 0000 1112334566655432 1 2599999987531 111
Q ss_pred CCccccccccCcCCccccccceEEE-ecCCCEEEEEEecCC-CCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCC-
Q 007890 439 YDFKNYDIFSVAENKSYTIRNGVYR-LNFNSTVDIILQNAN-SLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKK- 515 (586)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~l~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~- 515 (586)
+. ++.|++|+|+|+|.+ .+ .||||||||+||||+++ |.+........
T Consensus 340 -----------------------~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~ 389 (448)
T 3aw5_A 340 -----------------------FEHVSVEGVELWEIVNDKASM------PHPMHLHGFPMWIIERK-DSPRQVAELAVD 389 (448)
T ss_dssp -----------------------CCCEEECEEEEEEEEECSSSC------CEEEEESSSCBEEEEEE-SCCHHHHTTCCS
T ss_pred -----------------------eeccCCCCeEEEEEEcCCCCC------CcCEEECCceEEEEEec-CCCccccccccc
Confidence 45 788999999999987 55 89999999999999984 44431111112
Q ss_pred ---CCCCCCCcceeEEeCCCCEEEEE--EE---eCCceeeEEeecchhhhhcCceEEEec
Q 007890 516 ---YNLVNPIMKNTVPVHRYGWTALR--FR---ADNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 516 ---~n~~~p~~rDTv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
.+..++.|||||.|+|+++++|+ |+ +||| |+|||||+||++.|||++|.+
T Consensus 390 ~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 390 NRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp TTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred ccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 23345679999999999999655 99 8999 999999999999999999976
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=5.1e-79 Score=682.98 Aligned_cols=455 Identities=15% Similarity=0.135 Sum_probs=305.4
Q ss_pred cccceEEEEEEEEEEee--CCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCC-----------------------
Q 007890 38 AEARIRRYKWEVKYEYK--SPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLL----------------------- 92 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~--~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~----------------------- 92 (586)
+....+.|++++.+... .+|+..+.+|+|||++|||+|++++||+|+|+|+|+|.
T Consensus 28 ~~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 28 SDEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp CSCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGG
T ss_pred cCCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccc
Confidence 33445678888877654 56778889999999999999999999999999999952
Q ss_pred -----------------CCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEc-CCCcceeeeccc----cccc
Q 007890 93 -----------------TENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVV-DRPGTYLYHAHY----GMQR 150 (586)
Q Consensus 93 -----------------~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~----~~q~ 150 (586)
.+.|+|||||+++. +++||++ ||+|.||++|+|+|++ +++||||||||. +.|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccC--CcccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 23478899999885 6789875 9999999999999999 557999999994 7899
Q ss_pred cCcceEEEEEECCCCCCCCC-cccccceEEEEecccCCHHHHHhccc---------C---CC---CCCCCCCcceeecCC
Q 007890 151 EAGLYGSIRVSLPEGESEPY-AYDYDRSIILNDWFHRSAFEQAAGLS---------S---IP---FQWVGEPQSLLIQGK 214 (586)
Q Consensus 151 ~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~d~~~~~~~~~~~~~~---------~---~~---~~~~~~~~~~liNG~ 214 (586)
.+||+|+|||++++++..++ .+|+|++|+|+||+++...+...... . .. ......++.++|||+
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred hccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 99999999999887644443 35899999999998865433221100 0 00 001235688899998
Q ss_pred CCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCC-------eeEEEecCCccc-c
Q 007890 215 GRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGH-------NMTVVEADGHNV-E 286 (586)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh-------~~~via~DG~~~-~ 286 (586)
.++ .+.+++ ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +
T Consensus 263 ~~p--------------------------~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~ 315 (612)
T 3gyr_A 263 IWP--------------------------YADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPR 315 (612)
T ss_dssp ESC--------------------------EEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEE
T ss_pred ccc--------------------------eEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCcccc
Confidence 876 677765 58999999999999999999998 499999999998 5
Q ss_pred ceEE------eEEEEccCceEEEEEEeCCCCCCceEEEEEe-ecCCCC----CCCCCeEEEEEecCCCCCCCCCCCCCCC
Q 007890 287 PFVV------QNLFIYSGETYSVLIKADQNPTRNYWATTNI-VSRNAT----FTTPPGLAILNYYPNHPKRSPPTTPPSG 355 (586)
Q Consensus 287 P~~~------~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~-~~~~~~----~~~~~~~ail~y~~~~~~~~~~~~~p~~ 355 (586)
|+.+ +.|.|+|||||||+|++++ .+|.++..... ...+.. ........++++.............+..
T Consensus 316 Pv~v~~p~~~~~l~i~pGeRydVlV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (612)
T 3gyr_A 316 PVPVDFDDTLPVLSAAPAERFDLLVDFRA-LGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEV 394 (612)
T ss_dssp EEEECSSSSSSSEEECTTCEEEEEEECTT-CTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSS
T ss_pred ceeccCcccccEEEeccceEEEEEEECCC-CCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccc
Confidence 7665 4799999999999999998 34544433322 222211 1122344566766433222111111111
Q ss_pred CCcCCc--cccccccccccccCCCCCCCCCCCceEEEEEeeee----------------cCCCeEEEEEcCccccCCCCc
Q 007890 356 PLWNDV--GSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQN----------------NVSGNVRWSVNKVTYTLPHIP 417 (586)
Q Consensus 356 p~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----------------~~~g~~~~~iNg~~~~~p~~p 417 (586)
...... .............................+..... .......|.+|+..|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~------ 468 (612)
T 3gyr_A 395 LSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF------ 468 (612)
T ss_dssp CCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC------
Confidence 100000 00000000000000000000000000000000000 000011222222211
Q ss_pred hHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCe
Q 007890 418 YLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDF 497 (586)
Q Consensus 418 ~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F 497 (586)
.....+.++.|++|+|+|+|.+.+ .||||||||+|
T Consensus 469 ---------------------------------------~~~~~~~~~~g~~~~w~i~N~~~~------~HP~HLHG~~F 503 (612)
T 3gyr_A 469 ---------------------------------------NDGLGFTIGEGTHEQWTFLNLSPI------LHPMHIHLADF 503 (612)
T ss_dssp ---------------------------------------TSCCCEEEETTCEEEEEEEECSSS------CEEEEESSCEE
T ss_pred ---------------------------------------CCCcceEeCCCCEEEEEEEcCCCC------CcCEeECCCcE
Confidence 111237899999999999999877 89999999999
Q ss_pred EEEeeecCCCCCCC---------------CCCCCCCCCCCcceeEEeCCCCEEEEEEE-eCCceeeEEeecchhhhhcCc
Q 007890 498 WVLGYGEGKFDIYN---------------DPKKYNLVNPIMKNTVPVHRYGWTALRFR-ADNPGAWAFHCHIESHFYMGM 561 (586)
Q Consensus 498 ~Vl~~g~g~~~~~~---------------~~~~~n~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM 561 (586)
|||+++.+...... .....+..++.|||||.|+++++++|||+ +||||.|||||||++|||.||
T Consensus 504 ~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GM 583 (612)
T 3gyr_A 504 QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGM 583 (612)
T ss_dssp EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTC
T ss_pred EEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcC
Confidence 99998654332110 11245667889999999999999999999 799999999999999999999
Q ss_pred eEEEecccccccCCC
Q 007890 562 GVVFAEGIERLGELP 576 (586)
Q Consensus 562 ~~~~~~~~~~~~~~P 576 (586)
|+.|.+.+.+-.+.+
T Consensus 584 M~~f~V~~p~~~~~~ 598 (612)
T 3gyr_A 584 MRPFVVMPPEALKFD 598 (612)
T ss_dssp EEEEEEECHHHHTTC
T ss_pred CcceEEeCCccCCCC
Confidence 999987665444433
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.1e-78 Score=650.41 Aligned_cols=415 Identities=21% Similarity=0.260 Sum_probs=306.9
Q ss_pred cceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccc
Q 007890 40 ARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQ 119 (586)
Q Consensus 40 ~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q 119 (586)
...+.|+|++++..+.++|..+.+|+|||++|||+|++++||+|+|+|+|+ ++++|+|||||+++. +++||++ |
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~p---~ 88 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQ-LTEETTLHWHGLEVP--GEVDGGP---Q 88 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--HHHHCCT---T
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeC-CcCceeEeecccccC--cccCCCC---c
Confidence 345679999999988889999999999999999999999999999999999 789999999999987 4699997 8
Q ss_pred ccCCCCCeEEEEEEcCC-Ccceeeeccc----cccccCcceEEEEEECCCCCC--CCCcc-cccceEEEEecccCCHHHH
Q 007890 120 CPILPGETFTYKFVVDR-PGTYLYHAHY----GMQREAGLYGSIRVSLPEGES--EPYAY-DYDRSIILNDWFHRSAFEQ 191 (586)
Q Consensus 120 ~~i~pG~~~~Y~f~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~--~p~~~-d~e~~l~l~d~~~~~~~~~ 191 (586)
|+|.||++|+|+|++++ +||||||||. +.|+.+||+|+|||+++++.. .|..| ++|++|+|+||+++...++
T Consensus 89 ~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~ 168 (488)
T 3od3_A 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQI 168 (488)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSB
T ss_pred CcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCce
Confidence 99999999999999955 7999999995 689999999999999976532 23345 3689999999999765432
Q ss_pred HhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEe-
Q 007890 192 AAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQI- 270 (586)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i- 270 (586)
..............++.+||||+.++ .+.+ +|++|||||||+|..+.+.|+|
T Consensus 169 ~~~~~~~~~~~g~~gd~~lvNG~~~p--------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~ 221 (488)
T 3od3_A 169 DYQLDVMTAAVGWFGDTLLTNGAIYP--------------------------QHAA-PRGWLRLRLLNGCNARSLNFATS 221 (488)
T ss_dssp CCCCSHHHHHHCCCCSEEEETTBSSC--------------------------EEEE-EEEEEEEEEEECCSSCCEEEEET
T ss_pred eccccccccccCCCCCEEEEcCCcCc--------------------------cEec-CCCEEEEEEEccCCCceeeeeec
Confidence 21110000000235789999999887 4555 5789999999999999999999
Q ss_pred CCCeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC-C-CCCCeEEEEEecCCCCCCC
Q 007890 271 EGHNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT-F-TTPPGLAILNYYPNHPKRS 347 (586)
Q Consensus 271 ~gh~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~-~-~~~~~~ail~y~~~~~~~~ 347 (586)
+||+|+|||+||+++ +|+.+++|.|+|||||||+|++++ ++.|++++........ . .......+++.......
T Consensus 222 dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 297 (488)
T 3od3_A 222 DNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS-- 297 (488)
T ss_dssp TCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--
T ss_pred CCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--
Confidence 699999999999987 899999999999999999999997 6789998755432211 0 01112223333321000
Q ss_pred CCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeee-------------------cC----------
Q 007890 348 PPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQN-------------------NV---------- 398 (586)
Q Consensus 348 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------------------~~---------- 398 (586)
.... +|. .+..... .+......+|++.+..... ..
T Consensus 298 ~~~~---~P~------------~L~~~~~-~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (488)
T 3od3_A 298 ASGA---LPD------------TLSSLPA-LPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMG 361 (488)
T ss_dssp CCCC---CCS------------CCCCCCC-CCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSC
T ss_pred CCCC---CCc------------ccccCCC-CcccccccceEEEEEecccccccccccccccccccccccccccccccccc
Confidence 0000 110 0000000 0011112345555532100 00
Q ss_pred CCe-------------EEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEec
Q 007890 399 SGN-------------VRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLN 465 (586)
Q Consensus 399 ~g~-------------~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (586)
.|. ..|.|||++|.. . .|. +.++
T Consensus 362 ~g~~~~~~~g~~~~~~~~~~ING~~~~~-------------------~-~~~------------------------~~~~ 397 (488)
T 3od3_A 362 HGNMNHMNHGGKFDFHHANKINGQAFDM-------------------N-KPM------------------------FAAA 397 (488)
T ss_dssp CCCCCCSCCCGGGCGGGCEEETTBCCCT-------------------T-CCS------------------------EECC
T ss_pred cCccccccccccccccceeeECCeeCCC-------------------C-CCc------------------------eEcC
Confidence 010 137999987642 1 111 7889
Q ss_pred CCCEEEEEEecCC-CCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeC--
Q 007890 466 FNSTVDIILQNAN-SLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRAD-- 542 (586)
Q Consensus 466 ~g~~ve~~l~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~ad-- 542 (586)
.|++|+|+|.|.+ .+ .|||||||++|+|++++..... ..++.|||||.|+ ++++.|+|++|
T Consensus 398 ~G~~e~w~l~N~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~---------~~~~~~kDTV~v~-g~~~~i~~~f~~~ 461 (488)
T 3od3_A 398 KGQYERWVISGVGDMM------LHPFHIHGTQFRILSENGKPPA---------AHRAGWKDTVKVE-GNVSEVLVKFNHD 461 (488)
T ss_dssp BSSCEEEEEECTTCCC------CEEEEETTCCBEEEEBTTBCCC---------GGGSSSBSEEEES-SSEEEEEECBCSC
T ss_pred CCCEEEEEEEeCCCCC------CccEEEcCceEEEeccCCCccc---------cccCCceeEEEeC-CCEEEEEEEeccC
Confidence 9999999999987 44 8999999999999998432221 2246799999999 99999999974
Q ss_pred --CceeeEEeecchhhhhcCceEEEec
Q 007890 543 --NPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 543 --npG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+||.|||||||++|+|.|||..|.|
T Consensus 462 ~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 462 APKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp CCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 5789999999999999999999875
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.4e-76 Score=649.73 Aligned_cols=461 Identities=16% Similarity=0.143 Sum_probs=321.4
Q ss_pred ccceEEEEEEEEEEeeC--CCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCC----------------------
Q 007890 39 EARIRRYKWEVKYEYKS--PDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTE---------------------- 94 (586)
Q Consensus 39 ~~~~~~~~l~~~~~~~~--~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~---------------------- 94 (586)
....++|+|++.+.... +++..+.+|+|||++|||||++++||+|+|+++|+|...
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 34568899999988764 566789999999999999999999999999999996432
Q ss_pred ------------------CeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEc-CCCcceeeecccc----cccc
Q 007890 95 ------------------NVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVV-DRPGTYLYHAHYG----MQRE 151 (586)
Q Consensus 95 ------------------~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~----~q~~ 151 (586)
+|+|||||+++. +.+||++ ||+|.||++++|+|++ +++||||||||.. .|+.
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~ 183 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCC--CccCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhh
Confidence 289999999987 4589986 8999999999999999 5799999999964 4999
Q ss_pred CcceEEEEEECCCCCCCCC-cccccceEEEEecccCCHHHH------Hhc--ccC----CCC---CCCCCCcceeecCCC
Q 007890 152 AGLYGSIRVSLPEGESEPY-AYDYDRSIILNDWFHRSAFEQ------AAG--LSS----IPF---QWVGEPQSLLIQGKG 215 (586)
Q Consensus 152 ~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~d~~~~~~~~~------~~~--~~~----~~~---~~~~~~~~~liNG~~ 215 (586)
+||+|+|||+++++...++ .+|+|++|+|+||+++.+.+. ... +.. .+. .....++.+||||+.
T Consensus 184 ~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~ 263 (612)
T 2g23_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc
Confidence 9999999999876533222 368999999999999754210 000 000 000 002357999999998
Q ss_pred CCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCC-------eeEEEecCCccc-cc
Q 007890 216 RFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGH-------NMTVVEADGHNV-EP 287 (586)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh-------~~~via~DG~~~-~P 287 (586)
++ .++|++| +|||||||+|..+.+.|+|++| +|+|||+||+++ +|
T Consensus 264 ~p--------------------------~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P 316 (612)
T 2g23_A 264 WP--------------------------YADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRP 316 (612)
T ss_dssp SC--------------------------EEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEE
T ss_pred CC--------------------------eEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCC
Confidence 87 7999999 9999999999999999999999 899999999999 69
Q ss_pred eEEe------EEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCC----CCCeEEEEEecCCCCCCCCCCCCC-CCC
Q 007890 288 FVVQ------NLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFT----TPPGLAILNYYPNHPKRSPPTTPP-SGP 356 (586)
Q Consensus 288 ~~~~------~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~~~p-~~p 356 (586)
+.++ +|.|+|||||||+|++++.++.+|+|+........+.. ......++++.............| .+.
T Consensus 317 ~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~ 396 (612)
T 2g23_A 317 VPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLS 396 (612)
T ss_dssp EEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCC
T ss_pred EEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhc
Confidence 9999 99999999999999999865566988875422111000 011124565553221111111111 010
Q ss_pred -CcCCccccccccccccccCCCCCC-CCCCCceEEEEEee---------------eecCCC-eEEEEEcCccccCCCCch
Q 007890 357 -LWNDVGSRLNQSLAIKARKGFIIP-PPQSADRMIVMLNT---------------QNNVSG-NVRWSVNKVTYTLPHIPY 418 (586)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~---------------~~~~~g-~~~~~iNg~~~~~p~~p~ 418 (586)
....+..............+ +.. ......+.+.+... ....+| ...|.|||+.|..
T Consensus 397 ~~~~~l~~~~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~----- 470 (612)
T 2g23_A 397 GSFRRMSHDIPHGHRLIVLTP-PGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND----- 470 (612)
T ss_dssp SSCCCCCTTSCCEEEEEEECC-TTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS-----
T ss_pred cccccCCcccccceeEEeecc-ccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC-----
Confidence 00000000000000000000 000 00000111111110 000112 2357778775531
Q ss_pred HHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeE
Q 007890 419 LIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFW 498 (586)
Q Consensus 419 l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~ 498 (586)
. + .+.++.|++|+|+|+|.+.+ .||||||||.|+
T Consensus 471 ---------------~-~------------------------~~~v~~G~~v~w~l~N~~~~------~HPiHlHg~~F~ 504 (612)
T 2g23_A 471 ---------------G-L------------------------GFTIGEGTHEQWTFLNLSPI------LHPMHIHLADFQ 504 (612)
T ss_dssp ---------------C-C------------------------CEEEETTCEEEEEEEECSSS------CEEEEESSCCEE
T ss_pred ---------------C-C------------------------ceEecCCCEEEEEEEeCCCC------CCCeEEcCceEE
Confidence 0 1 17899999999999998876 899999999999
Q ss_pred EEeeecCCCC---CCCC------------CCCCCCCCCCcceeEEeCCCCEEEEEEEeC-CceeeEEeecchhhhhcCce
Q 007890 499 VLGYGEGKFD---IYND------------PKKYNLVNPIMKNTVPVHRYGWTALRFRAD-NPGAWAFHCHIESHFYMGMG 562 (586)
Q Consensus 499 Vl~~g~g~~~---~~~~------------~~~~n~~~p~~rDTv~vpp~g~v~irf~ad-npG~w~~HCHil~H~d~GM~ 562 (586)
|++++.+.++ .... ...++..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||
T Consensus 505 Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm 584 (612)
T 2g23_A 505 VLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMM 584 (612)
T ss_dssp EEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCE
T ss_pred EecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCc
Confidence 9998543221 1000 023455667899999999999999999999 99999999999999999999
Q ss_pred EEEecccccccCCCCCcccCC
Q 007890 563 VVFAEGIERLGELPSSIKGCV 583 (586)
Q Consensus 563 ~~~~~~~~~~~~~P~~~~~C~ 583 (586)
+.|.|.+++++++|.....-|
T Consensus 585 ~~f~V~p~~~~~~~~~~~~~~ 605 (612)
T 2g23_A 585 RPFVVMPPEALKFDHGGAHGG 605 (612)
T ss_dssp EEEEEECHHHHTTC-------
T ss_pred eEEEECchhhccCCCCCCCCC
Confidence 999999999998887654443
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=3.2e-53 Score=433.29 Aligned_cols=270 Identities=24% Similarity=0.322 Sum_probs=226.6
Q ss_pred ceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccc
Q 007890 41 RIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQ 119 (586)
Q Consensus 41 ~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q 119 (586)
.+|+|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|. ++.+++|||||+++.+++++||+|+++|
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~~~~~~DG~p~~t~ 79 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNM-TTLPHTIHWHGMLQRGTWQSDGVPHATQ 79 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeC-CCCceeEEecCcCCCCCcccCCCccccc
Confidence 4789999999998876 6888999999999999999999999999999999 7999999999999988789999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeeccccccc---cCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHhccc
Q 007890 120 CPILPGETFTYKFVVDRPGTYLYHAHYGMQR---EAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAAGLS 196 (586)
Q Consensus 120 ~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~ 196 (586)
|+|+||++++|+|+++++||||||||...+. .+||+|+|||++++....+..+|+|++|+|+||+++.... .
T Consensus 80 ~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~----~- 154 (318)
T 3g5w_A 80 HAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANK----P- 154 (318)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTC----T-
T ss_pred ccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccc----c-
Confidence 9999999999999999999999999976554 4899999999987542222246899999999998754211 1
Q ss_pred CCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeE
Q 007890 197 SIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMT 276 (586)
Q Consensus 197 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~ 276 (586)
..+......++.++|||+.+++. ..+++++|++|||||+|++.. .+.|||+||.|+
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~~-----------------------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~ 210 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPET-----------------------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQ 210 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTSS-----------------------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEE
T ss_pred ccCCCCCCcCcEEEEcCcCCCCC-----------------------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEE
Confidence 11111022578999999998721 248999999999999999976 799999999999
Q ss_pred EEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCC--CCCCeEEEEEecCC
Q 007890 277 VVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATF--TTPPGLAILNYYPN 342 (586)
Q Consensus 277 via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~--~~~~~~ail~y~~~ 342 (586)
||+.||.++ +|..+|++.|+||||+||++++++ +|.|.+++......... ......++|+|++.
T Consensus 211 vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 211 IAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred EEecCCcccCCCccccEEEECCCCEEEEEEECCC--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 999999998 799999999999999999999987 79999999876443210 12345789999864
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.7e-51 Score=425.08 Aligned_cols=270 Identities=24% Similarity=0.388 Sum_probs=225.9
Q ss_pred ceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccc
Q 007890 41 RIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQ 119 (586)
Q Consensus 41 ~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q 119 (586)
++++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|. ++.+++|||||+++.+++|+||+|+++|
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~-l~~~~siH~HG~~~~~~~~~DGvp~vtq 80 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNN-TSLPHTIHWHGVHQKGTWRSDGVPGVTQ 80 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEE-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEEC-CCCCccEEeCCCCcCCCcccCCCCcccc
Confidence 4789999999998876 5999999999999999999999999999999999 6899999999999998889999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeeccccc--ccc-CcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHhccc
Q 007890 120 CPILPGETFTYKFVVDRPGTYLYHAHYGM--QRE-AGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAAGLS 196 (586)
Q Consensus 120 ~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~ 196 (586)
|+|.||++|+|+|+++++||||||||... |.. +||+|+|||+++.....+..+|+|++++|+||+..... ..
T Consensus 81 ~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~-----~~ 155 (339)
T 2zwn_A 81 QPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVAD-----KY 155 (339)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTT-----CT
T ss_pred CccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheeccccc-----cc
Confidence 99999999999999999999999999655 787 99999999998754332334588999999999863211 11
Q ss_pred CCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeE
Q 007890 197 SIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMT 276 (586)
Q Consensus 197 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~ 276 (586)
..++.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|+
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~-----------------------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~ 211 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPL-----------------------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDML 211 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTS-----------------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEE
T ss_pred CCCCCCccccceEEEccccCCC-----------------------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEE
Confidence 1111101257889999998761 1258999999999999999955 899999999999
Q ss_pred EEecCCcccc-ceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCC-C-CCCCeEEEEEecCC
Q 007890 277 VVEADGHNVE-PFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNAT-F-TTPPGLAILNYYPN 342 (586)
Q Consensus 277 via~DG~~~~-P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~-~-~~~~~~ail~y~~~ 342 (586)
||+.||.+++ |..+|++.|.||||+||++++++ +|.|++++.....+.. . ......++|+|++.
T Consensus 212 vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 212 VTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999995 89999999999999999999987 6889999876653211 1 12345789999853
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6.1e-52 Score=484.71 Aligned_cols=268 Identities=16% Similarity=0.236 Sum_probs=204.2
Q ss_pred cccccceEEEEEEEEEEee--CCCCc--------------------------eeEEE-------EECCC--------CCC
Q 007890 36 PMAEARIRRYKWEVKYEYK--SPDCF--------------------------RKVVI-------TINGR--------TPG 72 (586)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~--~~dg~--------------------------~~~~~-------~~Ng~--------~pg 72 (586)
..+.+++|+|.+.|++..+ +|.+. .+.++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 3456889999999999864 34332 23333 57877 999
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeec----cCCCCCCCCc--cccccCCCCCeEEEEEEcCC----------
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQI----GTPWADGTEG--VTQCPILPGETFTYKFVVDR---------- 136 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~----~~~~~DGv~~--~~q~~i~pG~~~~Y~f~~~~---------- 136 (586)
|+||+++||+|+|+|+|+ +++++||||||++++ +.+|+||+++ ++||+|+||++|+|+|++.+
T Consensus 95 P~Ir~~~GD~v~v~v~N~-l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~ 173 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNL-ASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGN 173 (1065)
T ss_dssp CCEEEETTCEEEEEEEEE-SSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCS
T ss_pred CeEEEeCCeEEEEEEEEC-CCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCC
Confidence 999999999999999999 689999999999987 4578889898 89999999999999999955
Q ss_pred Ccceeeecccccc--ccCcceEEEEEECCCCCCC--CCcccccceEEEE------ecccCCHHHHHh-cccCC---CCCC
Q 007890 137 PGTYLYHAHYGMQ--REAGLYGSIRVSLPEGESE--PYAYDYDRSIILN------DWFHRSAFEQAA-GLSSI---PFQW 202 (586)
Q Consensus 137 ~Gt~wYH~H~~~q--~~~Gl~G~liV~~~~~~~~--p~~~d~e~~l~l~------d~~~~~~~~~~~-~~~~~---~~~~ 202 (586)
+||||||||...| +.+||+|+|||++++.... +..+|+|++|+|+ ||++........ ..... ...+
T Consensus 174 aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~ 253 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDF 253 (1065)
T ss_dssp EEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHH
T ss_pred ceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCccccccccccc
Confidence 4999999997654 5799999999999865332 3446899999999 566543221110 00000 0000
Q ss_pred CCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeEEEecC
Q 007890 203 VGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMTVVEAD 281 (586)
Q Consensus 203 ~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~D 281 (586)
...++.++|||+.+. ..+.+++++|++|||||||+|.. ..+.|+|+||.|++
T Consensus 254 ~~~~~~~~iNG~~~~-----------------------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v---- 306 (1065)
T 2j5w_A 254 QQSNRMYSVNGYTFG-----------------------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN---- 306 (1065)
T ss_dssp HHHTEEEEETTEETT-----------------------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE----
T ss_pred cccCcEEEECCccCC-----------------------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE----
Confidence 012457899998753 12368999999999999999976 68999999999993
Q ss_pred CccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecC
Q 007890 282 GHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYP 341 (586)
Q Consensus 282 G~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~ 341 (586)
+|+.+|++.|+|||||||+|++++ +|.|+|++...... .....+.++|.+
T Consensus 307 ----~p~~~dtv~I~pGer~dVlv~~~~--pG~y~i~~h~~~h~----~~Gm~~~~~V~~ 356 (1065)
T 2j5w_A 307 ----KNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQNLNHL----KAGLQAFFQVQE 356 (1065)
T ss_dssp ----TTEEESEEEECBTCEEEEEEECCS--CEEEEEEECSHHHH----HTTCEEEEEEEC
T ss_pred ----CCeeecEEEECCCcEEEEEEEeCC--CeeEEEEecCcchh----hCCCEEEEEEec
Confidence 678999999999999999999988 68999998765432 124577888874
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=8.7e-54 Score=481.22 Aligned_cols=225 Identities=20% Similarity=0.175 Sum_probs=172.6
Q ss_pred CceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc--------cccccCCCCCeEE
Q 007890 58 CFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG--------VTQCPILPGETFT 129 (586)
Q Consensus 58 g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~--------~~q~~i~pG~~~~ 129 (586)
|+.+..|+ ++|||+||+++||+|+|+|+|+ +++++||||||++++ +++||+++ ++||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~-l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNM-ASHPVSLHAVGVSYW--KASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECC-SSSCCCCCCSSSCCC--SSSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEEC-CCCCEeEEecCcccC--ccccCCccCCCCcccccccCcCCCCCeEE
Confidence 55555554 8999999999999999999999 789999999999986 34566554 8999999999999
Q ss_pred EEEEcC----------CCcceeeeccccc--cccCcceEEEEEECCCCCCCCCc-ccccceEEEEe------cccCCHHH
Q 007890 130 YKFVVD----------RPGTYLYHAHYGM--QREAGLYGSIRVSLPEGESEPYA-YDYDRSIILND------WFHRSAFE 190 (586)
Q Consensus 130 Y~f~~~----------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~l~d------~~~~~~~~ 190 (586)
|+|++. ++||||||||... |+.+||+|+|||+++........ ..+|+++++++ |+......
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~ 216 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNS 216 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCcccccccccc
Confidence 999983 4699999999665 88999999999999765221111 13788888864 44433211
Q ss_pred HHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcc-eEEEE
Q 007890 191 QAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALS-ALSFQ 269 (586)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~ 269 (586)
....... ..+....+.++|||+... ..+.+++++|++|||||+|+|... .|.||
T Consensus 217 ~~~~~~~--~~~~~~~~~~~ING~~~~-----------------------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~h 271 (742)
T 2r7e_A 217 LMQDRDA--ASARAWPKMHTVNGYVNR-----------------------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIF 271 (742)
T ss_dssp ------C--CSCCCCCCCCEETTBCTB-----------------------CCCCCEECSSSCEEEECCCCCSSSCCCCCC
T ss_pred ccccCCC--ccccccCceEEECCccCC-----------------------CCcceEEcCCCEEEEEEEeCCCCCcceEEE
Confidence 1111111 112234677899998753 123589999999999999999875 79999
Q ss_pred eCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 270 IEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 270 i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
|+||.|+|++ ..+|++.|.|||+++|++++++ +|.|.+.+....
T Consensus 272 lhGh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~--pG~w~~hCH~~~ 315 (742)
T 2r7e_A 272 LEGHTFLVRN--------HRQASLEISPITFLTAQTLLMD--LGQFLLFCHISS 315 (742)
T ss_dssp CTTCCCEETT--------EECCSCCCCTTCCCEEEECCCS--CSEECCCCCSSS
T ss_pred ECCCEEEEEe--------EecceEEeCCCcEEEEEEEeCC--CeeEEEEeCChh
Confidence 9999999984 2478889999999999999987 789988876543
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=5.9e-50 Score=401.76 Aligned_cols=123 Identities=25% Similarity=0.383 Sum_probs=107.5
Q ss_pred ccccceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc
Q 007890 37 MAEARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
.+++.+|+|+|++++.. .+.....++++||++|||+||+++||+|+|+|+|+ +++++||||||+++. .++||++
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-~~~~~siH~HG~~~~--~~~DG~~- 75 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 75 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEEC-CCCCccEeecCcccC--CccCCCc-
Confidence 36788999999999853 33444466789999999999999999999999999 699999999999987 4699999
Q ss_pred cccccCCCCCeEEEEEEcCC-------------Ccceeeeccc------cccccCcceEEEEEECCCC
Q 007890 117 VTQCPILPGETFTYKFVVDR-------------PGTYLYHAHY------GMQREAGLYGSIRVSLPEG 165 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~~-------------~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~ 165 (586)
++||+|+||++++|+|++.+ +||||||||. ..|+.+||+|+|||+++.+
T Consensus 76 ~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~ 143 (276)
T 3kw8_A 76 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 143 (276)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC
Confidence 89999999999999999953 7999999996 3689999999999998754
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=8.7e-50 Score=429.26 Aligned_cols=397 Identities=16% Similarity=0.053 Sum_probs=259.4
Q ss_pred cccceEEEEEEEEEEeeCCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcc
Q 007890 38 AEARIRRYKWEVKYEYKSPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGV 117 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~ 117 (586)
+...++++.++++...+..+| .+++|||++ ||+|+|++||+|+|+|+|. ....+++||||... .
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~-~~~~h~~~~~g~~~-----------~ 87 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNG-EGAQHDVVVDQYAA-----------R 87 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECS-SSSCBCCEETTTTE-----------E
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcC-CCCceEEEEccCCc-----------c
Confidence 455677777776654443333 456899999 9999999999999999999 56669999998632 2
Q ss_pred ccccCCCCCeEEEEEEcCCCcceeeeccccccccCcceEEEEEECCCCCCCCCccc------ccceEEEEecccCCHHHH
Q 007890 118 TQCPILPGETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYD------YDRSIILNDWFHRSAFEQ 191 (586)
Q Consensus 118 ~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d------~e~~l~l~d~~~~~~~~~ 191 (586)
++|+|.||++++|.|++.++||||||||...|+.+||.|.|+|+++........++ .+++..+ |+........
T Consensus 88 ~~~~i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 88 SAIVNGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCCBCSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred cceecCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 57999999999999999889999999999889999999999999875421110110 0111111 1110000000
Q ss_pred Hh-----cccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCC-cce
Q 007890 192 AA-----GLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTA-LSA 265 (586)
Q Consensus 192 ~~-----~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~-~~~ 265 (586)
.. ...... ....+.+++||+.- .+++++++|++|||||+|.+. ...
T Consensus 167 ~l~~~~~~~~~~~---g~~~~~~~~NG~~p-------------------------gp~i~v~~G~~v~~rl~N~~~~~~~ 218 (447)
T 2dv6_A 167 DLETVEVKGQLDD---NTTYTYWTFNGKVP-------------------------GPFLRVRVGDTVELHLKNHKDSLMV 218 (447)
T ss_dssp EEEEEEEEEEEET---TEEEEEEEETTBBS-------------------------CCCEEEETTCEEEEEEEECTTCSSC
T ss_pred EEEEEEEEEeccC---CceeEEEEECCccC-------------------------CCeEEecCCCEEEEEEEeCCCCcee
Confidence 00 000000 01245688888741 137999999999999999985 345
Q ss_pred EEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCCCC
Q 007890 266 LSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNHPK 345 (586)
Q Consensus 266 ~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~ 345 (586)
+.++++|. ++.||.+ +.+.|.||||+++++++++ +|+||+++........ ......+.+.|.+...
T Consensus 219 ~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~~~~~~~-~~~Gl~g~l~v~~~~~- 284 (447)
T 2dv6_A 219 HSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCATPSVPTH-ITNGMYGLLLVEPEGG- 284 (447)
T ss_dssp BCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCSSSHHHH-HHTTCEEEEEEECTTC-
T ss_pred EEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCCCChHHH-HhCCCEEEEEEeCCCC-
Confidence 77777774 3689973 2245999999999999987 6999999864210000 0123456777763211
Q ss_pred CCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhc
Q 007890 346 RSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKEN 425 (586)
Q Consensus 346 ~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~ 425 (586)
+|.++. ++...+..... ... . .......+............|.|||+.+....
T Consensus 285 ---------~P~~d~-----~~~~~~~~~~~-~~~-~-~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~---------- 337 (447)
T 2dv6_A 285 ---------LPQVDR-----EFYVMQGEIYT-VKS-F-GTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR---------- 337 (447)
T ss_dssp ---------SCCCSE-----EEEEEEEEECB-SSC-T-TCCEECCBBHHHHHTTCCSEEEETTSTTCCCC----------
T ss_pred ---------CCCCCe-----eEEEEeccccc-CCc-c-cccccccCChHHhhccCCCEEEECCcccCCCC----------
Confidence 111111 00001111100 000 0 00000000000000011246889988653210
Q ss_pred cccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecC
Q 007890 426 ITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEG 505 (586)
Q Consensus 426 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g 505 (586)
...+.++.|++++|+|+|.+.. ..||||||||+|+||+.+.+
T Consensus 338 ---------------------------------~~~~~v~~g~~vrlrliN~~~~-----~~h~~hlhGh~f~vv~~dG~ 379 (447)
T 2dv6_A 338 ---------------------------------SHPLYASVGETVRIFFGVGGPN-----FTSSFHVIGEIFDHVYSLGS 379 (447)
T ss_dssp ---------------------------------CCCEEECTTCEEEEEEEEEESS-----CCEEEEEETCCEEEECGGGC
T ss_pred ---------------------------------CcceEECCCCEEEEEEEeCCCC-----ceEeEEEcCcEEEEEEcCCc
Confidence 0128899999999999997632 28999999999999998532
Q ss_pred CCCCCCCCCCCCCCCCC-cceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEeccc
Q 007890 506 KFDIYNDPKKYNLVNPI-MKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 506 ~~~~~~~~~~~n~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+ +..|. +|||+.|+|++++.|+|++||||.|+||||+++|++.||+++|.+..
T Consensus 380 -~----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 380 -V----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp -S----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred -c----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 2 12344 79999999999999999999999999999999999999999997643
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=5.1e-50 Score=406.06 Aligned_cols=134 Identities=23% Similarity=0.355 Sum_probs=108.4
Q ss_pred ccccceEEEEEEEEEEeeCCCC-ceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC
Q 007890 37 MAEARIRRYKWEVKYEYKSPDC-FRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE 115 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~~dg-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~ 115 (586)
.+.+.+|+|+|.+++.. ++ ..+.++.+||++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||++
T Consensus 24 ~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~-l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNT-TDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ---CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT
T ss_pred ccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEEC-CCCCccEEeCCcccC--CccCCCc
Confidence 46778999999998764 23 23345566999999999999999999999999 799999999999886 6799997
Q ss_pred ccccccCCCCCeEEEEEEcC-------------CCcceeeecccc------ccccCcceEEEEEECCCCCCCCCcccccc
Q 007890 116 GVTQCPILPGETFTYKFVVD-------------RPGTYLYHAHYG------MQREAGLYGSIRVSLPEGESEPYAYDYDR 176 (586)
Q Consensus 116 ~~~q~~i~pG~~~~Y~f~~~-------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~p~~~d~e~ 176 (586)
++||+|+||++|+|+|++. ++||||||||.. .|+.+||+|+|||+++.+ ..+|+|+
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~e~ 172 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKRQF 172 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc----cCccccc
Confidence 7999999999999999984 679999999953 367889999999998753 2335555
Q ss_pred eEEEE
Q 007890 177 SIILN 181 (586)
Q Consensus 177 ~l~l~ 181 (586)
+++++
T Consensus 173 ~l~~~ 177 (299)
T 3t9w_A 173 TVVFN 177 (299)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 55443
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.1e-48 Score=402.02 Aligned_cols=269 Identities=24% Similarity=0.308 Sum_probs=222.1
Q ss_pred ccccceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCC-CCCeeEEecceeeccCCCCCCC
Q 007890 37 MAEARIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLL-TENVAIHWHGIRQIGTPWADGT 114 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~siH~HGl~~~~~~~~DGv 114 (586)
.+.+++++|+|++++..+.+ ||..+.+|+|||++|||+|++++||+|+|+|+|++. ..+++|||||+.. +||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCC
Confidence 35678899999999998887 899999999999999999999999999999999953 2699999999853 6888
Q ss_pred CccccccCCCCCeEEEEEEcCCCcceeeeccc---cccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHH
Q 007890 115 EGVTQCPILPGETFTYKFVVDRPGTYLYHAHY---GMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQ 191 (586)
Q Consensus 115 ~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~ 191 (586)
+.. ..|.||++++|+|+++++||||||||. ..|+.+||+|+|||++++. .| .+|+|++++++||++......
T Consensus 108 ~~~--~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 108 AAA--TFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TTT--TCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTC
T ss_pred Ccc--eeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCcccc
Confidence 754 359999999999999999999999995 6899999999999998643 23 578999999999998752110
Q ss_pred HhcccCCCC--CCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEE
Q 007890 192 AAGLSSIPF--QWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQ 269 (586)
Q Consensus 192 ~~~~~~~~~--~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~ 269 (586)
. +...... .....++.++|||+.++.| ..+.+++++|++|||||+|+|....+.||
T Consensus 183 ~-g~~~~~~~~~~~~~~~~~~iNG~~~~~~---------------------~~~~l~v~~G~~vRlRliN~~~~~~~~~~ 240 (327)
T 1kbv_A 183 Q-GLQPFDMDKAVAEQPEYVVFNGHVGALT---------------------GDNALKAKAGETVRMYVGNGGPNLVSSFH 240 (327)
T ss_dssp C-EEECBCHHHHHHTCCSEEEETTSTTTTS---------------------GGGCEEEETTEEEEEEEEEEESSCCEEEE
T ss_pred c-cccccChhHhccCCCceEEEcCcccCCC---------------------CceeEEeCCCCEEEEEEECCCCCCceeEE
Confidence 0 0000000 0013578999999998731 11368999999999999999988899999
Q ss_pred eCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCC
Q 007890 270 IEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPN 342 (586)
Q Consensus 270 i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~ 342 (586)
|+||.|+||+.||.+++|..++++.|+||||+||+|++++ +|+|+|++.....+. .....|+|+|++.
T Consensus 241 l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~--pG~y~l~~h~~~~~~---~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 241 VIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRAF---NKGALGQLKVEGA 308 (327)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHHH---HSSCEEEEEEESC
T ss_pred EeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC--CeEEEEEeccccccc---cCCcEEEEEECCC
Confidence 9999999999999999999999999999999999999997 699999997654421 2346899999854
No 26
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.8e-48 Score=395.41 Aligned_cols=184 Identities=22% Similarity=0.311 Sum_probs=152.7
Q ss_pred ccccccceEEEEEEEEEEeeCCCCce-eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCC
Q 007890 35 VPMAEARIRRYKWEVKYEYKSPDCFR-KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADG 113 (586)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~~~dg~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DG 113 (586)
.+.+.+.+++++|.+++. ++|.. ..++..||++|||+||+++||+|+|+|+|+ +++++||||||+++. +.+||
T Consensus 6 ~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~--~~~dG 79 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENT-MDVPVSLHVHGLDYE--ISSDG 79 (313)
T ss_dssp BCCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSC
T ss_pred cCCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEEC-CCCCccEeecCCcCC--ccCCC
Confidence 445677889999987643 55544 345677999999999999999999999999 799999999999986 57999
Q ss_pred CCccccccCCCCCeEEEEEEcC-------------CCcceeeeccccc------cccCcceEEEEEECCCCCCCCCcccc
Q 007890 114 TEGVTQCPILPGETFTYKFVVD-------------RPGTYLYHAHYGM------QREAGLYGSIRVSLPEGESEPYAYDY 174 (586)
Q Consensus 114 v~~~~q~~i~pG~~~~Y~f~~~-------------~~Gt~wYH~H~~~------q~~~Gl~G~liV~~~~~~~~p~~~d~ 174 (586)
++ .+||+|+||++|+|+|++. ++||||||||... |+.+||+|+|||+++.+ ..+|+
T Consensus 80 ~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~ 154 (313)
T 3tas_A 80 TK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDR 154 (313)
T ss_dssp ST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSE
T ss_pred Cc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccc
Confidence 98 5899999999999999863 6799999999543 46799999999998754 35689
Q ss_pred cceEEEEecccCCHHHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEE
Q 007890 175 DRSIILNDWFHRSAFEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYR 254 (586)
Q Consensus 175 e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~r 254 (586)
|++|+++||+ +||+... ..+.+.++.|++||
T Consensus 155 e~~l~~~d~t--------------------------~Ng~~~~-----------------------~~~~l~v~~Ge~vr 185 (313)
T 3tas_A 155 THTIVFNDMT--------------------------INNRPAH-----------------------TGPDFEATVGDRVE 185 (313)
T ss_dssp EEEEEEETTE--------------------------ETTCCTT-----------------------CCCCEEEETTCEEE
T ss_pred cceeeccchh--------------------------cccCCcc-----------------------cccccccccCCEEE
Confidence 9999999873 4565554 12358999999999
Q ss_pred EEEeecCCcceEEEEeCCCeeEEEe
Q 007890 255 LRISSLTALSALSFQIEGHNMTVVE 279 (586)
Q Consensus 255 lRliN~g~~~~~~~~i~gh~~~via 279 (586)
|||+|++.. .+.|||+||.|+|++
T Consensus 186 ~~liN~g~~-~hpfHlHGh~F~v~~ 209 (313)
T 3tas_A 186 FVMITHGEY-YHTFHLHGHRWADNR 209 (313)
T ss_dssp EEEEEESSC-CEEEEETTCCEESST
T ss_pred EEEeccccc-ceeeeecCCeeEEEE
Confidence 999999954 799999999997643
No 27
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.4e-48 Score=454.41 Aligned_cols=412 Identities=15% Similarity=0.157 Sum_probs=264.2
Q ss_pred ceeEEEEECCCCCC--CcEEeecCCEEEEEEEeCCCCCCeeEEecceeecc-CCCCCCCCccccccCCCCCeEEEEEEcC
Q 007890 59 FRKVVITINGRTPG--PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIG-TPWADGTEGVTQCPILPGETFTYKFVVD 135 (586)
Q Consensus 59 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~-~~~~DGv~~~~q~~i~pG~~~~Y~f~~~ 135 (586)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.++||++.++ |+|.||.+++|+|.+.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 57899999999999 889999999999999987 4459999999998 89999999999 9999999999999999
Q ss_pred CCcceeeeccccccccCcceEEEEEECCCCCCCC-CcccccceEEE----EecccCCHHHHHhcccCCCCCCCCCCccee
Q 007890 136 RPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEP-YAYDYDRSIIL----NDWFHRSAFEQAAGLSSIPFQWVGEPQSLL 210 (586)
Q Consensus 136 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p-~~~d~e~~l~l----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (586)
++||||||||+..|+.+||.|.++|++......+ +.||.|.+++| +||++.+.......+...... .+..++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987543333 67788999999 899997765543322111111 245555
Q ss_pred ecCCCCC-CCCCCC---CCCCccceeecCCC------CCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEec
Q 007890 211 IQGKGRF-NCSSLN---SPSLNVGIICNETN------PECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEA 280 (586)
Q Consensus 211 iNG~~~~-~~~~~~---~~~~~~~~~~~~~~------~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~ 280 (586)
+|+.... .-.+.. ..-.+..|+..... -+...++|++++|+++++|++|... ..+.++.+|. .+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC
Confidence 5653221 000000 00000011110000 1234478999999999999999864 4677777764 33322
Q ss_pred CCccccceEEeEEEEccCceEEEEEEeCCCC--------CCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCC
Q 007890 281 DGHNVEPFVVQNLFIYSGETYSVLIKADQNP--------TRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTP 352 (586)
Q Consensus 281 DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~--------~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~ 352 (586)
|. ..|.||++++..+.+.+.. .|+||.+........ . .....+.|.+...... .....
T Consensus 845 -~~---------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q-~-~~GL~G~liV~~~~~l--~~~~~ 910 (1065)
T 2j5w_A 845 -TV---------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD-L-YSGLIGPLIVCRRPYL--KVFNP 910 (1065)
T ss_dssp -CC---------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH-H-HTTCEEEEEEECCC-------CC
T ss_pred -CC---------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh-h-hccccceeEecCcccc--cccCC
Confidence 21 2567999988888876421 258998765321100 0 0122333444321110 00000
Q ss_pred CCCCCcCCccccc-cccccccccC------CCCCCCCCCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhc
Q 007890 353 PSGPLWNDVGSRL-NQSLAIKARK------GFIIPPPQSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKEN 425 (586)
Q Consensus 353 p~~p~~~~~~~~~-~~~~~~~~~~------~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~ 425 (586)
+ ... +..... .+.... ... .+... |...+. .. .........|.|||..|..
T Consensus 911 ~--~d~-D~~l~~~~~d~~~-~~y~~~n~~~~~~~-P~~v~~----~~-~~~~~~~~~~~iNG~~~~~------------ 968 (1065)
T 2j5w_A 911 R--RKL-EFALLFLVFDENE-SWYLDDNIKTYSDH-PEKVNK----DD-EEFIESNKMHAINGRMFGN------------ 968 (1065)
T ss_dssp C--CEE-EEEEEEEEEEGGG-STTHHHHHHHHCSC-GGGCCT----TC-HHHHHHTEEEEETTBCTTC------------
T ss_pred C--cce-EEEEEEEeecCCc-ceeeccCcccccCC-ccccCc----ch-hhhhccCceEEECCccCCC------------
Confidence 0 000 000000 000000 000 00000 000000 00 0000001235566654310
Q ss_pred cccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecC
Q 007890 426 ITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEG 505 (586)
Q Consensus 426 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g 505 (586)
+..+.++.|++|+|+|.|.+.. ...||||||||.|+|++.+
T Consensus 969 ---------------------------------~~~~~v~~G~~vr~~l~N~g~~----~~~HpfHlHG~~F~vv~~~-- 1009 (1065)
T 2j5w_A 969 ---------------------------------LQGLTMHVGDEVNWYLMGMGNE----IDLHTVHFHGHSFQYKHRG-- 1009 (1065)
T ss_dssp ---------------------------------CCCCEEETTCEEEEEEEECCST----TCCEEEEESSCCEEETTTT--
T ss_pred ---------------------------------CccEEeCCCCEEEEEEEeCCCC----CcceeEEEcccEEEEEecC--
Confidence 1127899999999999997521 1389999999999998752
Q ss_pred CCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEeccccc
Q 007890 506 KFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGIER 571 (586)
Q Consensus 506 ~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~ 571 (586)
|.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|.+.+.+
T Consensus 1010 ---------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1010 ---------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp ---------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred ---------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 589999999999999999999999999999999999999999999887643
No 28
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=8.3e-47 Score=381.21 Aligned_cols=239 Identities=21% Similarity=0.300 Sum_probs=207.3
Q ss_pred cccceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc
Q 007890 38 AEARIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
.+..+++|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|+ ++.+++|||||++. +++||+|+
T Consensus 30 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~-~~~~~~iH~HG~~~---~~~DG~p~ 105 (288)
T 3gdc_A 30 DGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNA-GAHPHTIHFHGVHR---ATMDGTPG 105 (288)
T ss_dssp TSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEESSCCC---GGGSCCTT
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeC-CCCcccEEeccccc---cccCCCCC
Confidence 4556899999999987754 5999999999999999999999999999999999 79999999999973 68999999
Q ss_pred cccccCCCCCeEEEEEEcCCCcceeeecccc---ccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHh
Q 007890 117 VTQCPILPGETFTYKFVVDRPGTYLYHAHYG---MQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAA 193 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~ 193 (586)
++||+|+||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ..+|+|++|+++||+.++
T Consensus 106 ~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~---~~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 106 IGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR---PPADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp STTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC---CCCSEEEEEEEEEECCSS------
T ss_pred ccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC---CCCcceEEEEEeeEecCC------
Confidence 9999999999999999999999999999975 6899999999999987642 245789999999998762
Q ss_pred cccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcc-eEEEEeCC
Q 007890 194 GLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALS-ALSFQIEG 272 (586)
Q Consensus 194 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~i~g 272 (586)
+ ..++.++|||+.+++ ....+++++|++|||||+|++... .|.|||+|
T Consensus 177 -----g----~~~~~~~iNG~~~~~----------------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG 225 (288)
T 3gdc_A 177 -----G----DDNEFYSVNGLPFHF----------------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHG 225 (288)
T ss_dssp -----T----TCCSEEEETTSTTHH----------------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETT
T ss_pred -----C----CCcceEEECcccccc----------------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcC
Confidence 1 146789999998751 012589999999999999999653 79999999
Q ss_pred CeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEee
Q 007890 273 HNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIV 322 (586)
Q Consensus 273 h~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~ 322 (586)
|.|+|++.++....|...|++.|.||||++|++++++ +|.|.+.+...
T Consensus 226 ~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~--pG~~~~hCH~~ 273 (288)
T 3gdc_A 226 NFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY--PGKFMFHAHKT 273 (288)
T ss_dssp CCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCS--CEEEEEECSSH
T ss_pred CEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCC--CEEEEEEecCh
Confidence 9999998444333678999999999999999999987 79999987654
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=9.7e-47 Score=389.03 Aligned_cols=134 Identities=27% Similarity=0.414 Sum_probs=108.5
Q ss_pred cccceEEEEEEEEEEeeCCCCceeE-EEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc
Q 007890 38 AEARIRRYKWEVKYEYKSPDCFRKV-VITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~~~~dg~~~~-~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
+.+++++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|. ++++++|||||+++. .++||++
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~-l~~~~sih~HG~~~~--~~~DG~~- 116 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 116 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEEC-CCCCeeEEecCcccC--CcCCCcc-
Confidence 356789999999875 3443222 1234899999999999999999999999 699999999999986 6899999
Q ss_pred cccccCCCCCeEEEEEEcCC-------------Ccceeeeccc------cccccCcceEEEEEECCCCCCCCCcccccce
Q 007890 117 VTQCPILPGETFTYKFVVDR-------------PGTYLYHAHY------GMQREAGLYGSIRVSLPEGESEPYAYDYDRS 177 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~~-------------~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~ 177 (586)
++||+|.||++++|+|++.+ +||||||||. ..|+.+||+|+|||+++.+. .+|+|++
T Consensus 117 ~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~----~pd~e~~ 192 (343)
T 3cg8_A 117 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHT 192 (343)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEE
T ss_pred cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC----CCCceEE
Confidence 88999999999999999954 4899999995 36899999999999987541 1355555
Q ss_pred EEEEe
Q 007890 178 IILND 182 (586)
Q Consensus 178 l~l~d 182 (586)
|+++|
T Consensus 193 l~~~d 197 (343)
T 3cg8_A 193 IVFND 197 (343)
T ss_dssp EEEET
T ss_pred EEccc
Confidence 55543
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.2e-45 Score=394.14 Aligned_cols=272 Identities=21% Similarity=0.284 Sum_probs=223.3
Q ss_pred cccccceEEEEEEEEEEeeC-CCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCC-CCCeeEEecceeeccCCCCCC
Q 007890 36 PMAEARIRRYKWEVKYEYKS-PDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLL-TENVAIHWHGIRQIGTPWADG 113 (586)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~~-~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~siH~HGl~~~~~~~~DG 113 (586)
..+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.|. ..+++|||||+++ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 34678899999999999887 5899999999999999999999999999999999953 3699999999864 588
Q ss_pred CCccccccCCCCCeEEEEEEcCCCcceeeecc---ccccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHH
Q 007890 114 TEGVTQCPILPGETFTYKFVVDRPGTYLYHAH---YGMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFE 190 (586)
Q Consensus 114 v~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~ 190 (586)
++..+ +|.||++++|+|+++++|||||||| +..|+.+||+|+|||++++. .| .+|+|++|+++||++.....
T Consensus 97 ~~~~~--~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 97 GAESS--FTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGGGC--CBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTT
T ss_pred CCccE--EECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCccc
Confidence 77643 6999999999999999999999996 57899999999999997643 22 67899999999999875311
Q ss_pred HH-hcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEE
Q 007890 191 QA-AGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQ 269 (586)
Q Consensus 191 ~~-~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~ 269 (586)
.. .............+++++|||+..+. ...+.+.+++|++|||||+|+|....+.|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~---------------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~ 230 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGST---------------------TDENSLTAKVGETVRLYIGNGGPNLVSSFH 230 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTT---------------------SGGGCEEEETTCEEEEEEEEEESSCCEEEE
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCC---------------------CCCCceEeCCCCEEEEEEEeCCCCCceeeE
Confidence 00 00000000002467999999998751 011368999999999999999988899999
Q ss_pred eCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecCCC
Q 007890 270 IEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYPNH 343 (586)
Q Consensus 270 i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~ 343 (586)
|+||.|+||+.||.+++|..++++.|.||||+||+|++++ +|+|++++...... ......++++|.+..
T Consensus 231 i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~--~G~y~~~~~~~~~~---~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 231 VIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV--PGTFILVDHSIFRA---FNKGALAMLKVEGPD 299 (442)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS--CEEEEEEESSTHHH---HTTSCEEEEEEESCC
T ss_pred EcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC--CCeEEEEecccccc---cccCceEEEEecCCC
Confidence 9999999999999999999999999999999999999997 69999998765431 133568999998644
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=3.5e-44 Score=370.88 Aligned_cols=271 Identities=21% Similarity=0.244 Sum_probs=208.8
Q ss_pred ccccceEEEEEEEEEEee--CCCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCC
Q 007890 37 MAEARIRRYKWEVKYEYK--SPDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGT 114 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~--~~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv 114 (586)
.+.+.+++|+|++++..+ .+||..+.+|+|||++|||+|++++||+|+|+|+|++ +++||||+++.+..++||.
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~h~~~~h~~~~~~~~ 102 (336)
T 1oe1_A 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNAMPHNVDFHGATGALGG 102 (336)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC----CCCccccceECCCCCCCCC
Confidence 346788999999998775 5789999999999999999999999999999999994 3567777777665677777
Q ss_pred CccccccCCCCCeEEEEEEcCCCcceeeeccc----cccccCcceEEEEEECCCCC----CCCCcccccceEEEEecccC
Q 007890 115 EGVTQCPILPGETFTYKFVVDRPGTYLYHAHY----GMQREAGLYGSIRVSLPEGE----SEPYAYDYDRSIILNDWFHR 186 (586)
Q Consensus 115 ~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~l~d~~~~ 186 (586)
+.+++ |.||++++|+|+++++||||||||. ..|+.+||+|+|||++++.. ..+..||+|++|+++||++.
T Consensus 103 ~~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 103 AKLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred cceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeec
Confidence 77664 9999999999999999999999995 46999999999999987532 23556799999999999984
Q ss_pred CHH-HHHhcccCCCCC--------CCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEE
Q 007890 187 SAF-EQAAGLSSIPFQ--------WVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRI 257 (586)
Q Consensus 187 ~~~-~~~~~~~~~~~~--------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRl 257 (586)
.+. ..+..+...+.. ....++.++|||+.++.| ..+.++|++|++|||
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~---------------------~~~~l~v~~GervRl-- 237 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT---------------------GANALTAKVGETVLL-- 237 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS---------------------GGGCEEEETTCEEEE--
T ss_pred cccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC---------------------CCcceEcCCCCEEEE--
Confidence 211 000001110000 023678999999997621 113699999997765
Q ss_pred eecCCcceEE-EEeCCCeeEEEecCCccccce--EEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeE
Q 007890 258 SSLTALSALS-FQIEGHNMTVVEADGHNVEPF--VVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGL 334 (586)
Q Consensus 258 iN~g~~~~~~-~~i~gh~~~via~DG~~~~P~--~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ 334 (586)
+|++..+.+. +.|++|.++|++ ||.+++|. .++++.|++|||+||+|++++ +|+|+++++...... .....
T Consensus 238 in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~~---~~G~~ 311 (336)
T 1oe1_A 238 IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEAF---ELGAA 311 (336)
T ss_dssp EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHHH---TTSCE
T ss_pred EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC--CceEEEEechhhccc---cCCCe
Confidence 5666555544 456999999997 99999764 368999999999999999998 699999987643210 23567
Q ss_pred EEEEecCC
Q 007890 335 AILNYYPN 342 (586)
Q Consensus 335 ail~y~~~ 342 (586)
|+++|.+.
T Consensus 312 ~~~~V~~~ 319 (336)
T 1oe1_A 312 GHIKVEGK 319 (336)
T ss_dssp EEEEEESC
T ss_pred EEEEECCC
Confidence 89999853
No 32
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=6.1e-44 Score=368.46 Aligned_cols=271 Identities=21% Similarity=0.191 Sum_probs=212.0
Q ss_pred cccccceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCC
Q 007890 36 PMAEARIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGT 114 (586)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv 114 (586)
..+.+.+++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|+ .+++||||+++.+....||.
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~----~~~~h~Hg~~~~~~~~~~~~ 101 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP----PENTMPHNIDFHAATGALGG 101 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----TTCCSCBCCEETTSCSGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----CCCcccccceecCCCCCCCC
Confidence 356778999999999998876 6999999999999999999999999999999999 47999999998765455666
Q ss_pred CccccccCCCCCeEEEEEEcCCCcceeeecccc-----ccccCcceEEEEEECCCCC----CCCCcccccceEEEEeccc
Q 007890 115 EGVTQCPILPGETFTYKFVVDRPGTYLYHAHYG-----MQREAGLYGSIRVSLPEGE----SEPYAYDYDRSIILNDWFH 185 (586)
Q Consensus 115 ~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~l~d~~~ 185 (586)
++++ .|.||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++
T Consensus 102 ~~~~--~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 102 GGLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYI 179 (333)
T ss_dssp GGGC--CBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECC
T ss_pred Ccee--EeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeecc
Confidence 6665 499999999999999999999999975 6999999999999976532 2356789999999999998
Q ss_pred CC--HHHHHhcccCC--------CCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEE
Q 007890 186 RS--AFEQAAGLSSI--------PFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRL 255 (586)
Q Consensus 186 ~~--~~~~~~~~~~~--------~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rl 255 (586)
.. ...+ ..+... .......++.++|||+.++ + ...+.++|++||+|||
T Consensus 180 ~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~---~------------------~~~~~l~v~~Ger~Rl 237 (333)
T 1mzy_A 180 PKDEDGTY-MRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGA---L------------------TGEGALKAKVGDNVLF 237 (333)
T ss_dssp CBCTTSCB-CCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTT---T------------------SGGGCEEEETTCEEEE
T ss_pred Cccccccc-cccccccccccchhHHhhccCCcEEEECCcccc---c------------------CCCcceEecCCCEEEE
Confidence 32 1110 000000 0000235789999999864 1 0123699999999888
Q ss_pred EEeecCCcceEEEEeCCCeeEEEecCCcccc-ce-EEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCe
Q 007890 256 RISSLTALSALSFQIEGHNMTVVEADGHNVE-PF-VVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPG 333 (586)
Q Consensus 256 RliN~g~~~~~~~~i~gh~~~via~DG~~~~-P~-~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~ 333 (586)
|++|++....+ ..+++|.++||+ ||.+++ |. .++++.|.||||+||+|++++ +|+|++.++...... ....
T Consensus 238 ~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~~---~~Gm 310 (333)
T 1mzy_A 238 VHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEAV---HKGA 310 (333)
T ss_dssp EEEESSSCBCE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHHH---TTCC
T ss_pred EECCCCCcccc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhHh---hCCC
Confidence 77776544333 338999999999 999996 44 489999999999999999997 699999988754320 2346
Q ss_pred EEEEEecC
Q 007890 334 LAILNYYP 341 (586)
Q Consensus 334 ~ail~y~~ 341 (586)
.++++|.+
T Consensus 311 ~~~~~v~~ 318 (333)
T 1mzy_A 311 TAHVLVEG 318 (333)
T ss_dssp EEEEEEES
T ss_pred EEEEEEcC
Confidence 78999984
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.9e-43 Score=366.07 Aligned_cols=270 Identities=19% Similarity=0.205 Sum_probs=207.1
Q ss_pred ccccceEEEEEEEEEEeeC--CCCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCC
Q 007890 37 MAEARIRRYKWEVKYEYKS--PDCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGT 114 (586)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~~--~dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv 114 (586)
.+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----CCCccCcceeCCcCCCCCC
Confidence 4567899999999998765 679999999999999999999999999999999994 7899999998764444555
Q ss_pred CccccccCCCCCeEEEEEEcCCCcceeeecccc----ccccCcceEEEEEECCCCC----CCCCcccccceEEEEecccC
Q 007890 115 EGVTQCPILPGETFTYKFVVDRPGTYLYHAHYG----MQREAGLYGSIRVSLPEGE----SEPYAYDYDRSIILNDWFHR 186 (586)
Q Consensus 115 ~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~l~d~~~~ 186 (586)
..++ .|.||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++.
T Consensus 109 ~~~~--~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 109 GALT--QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GGGC--CBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCC
T ss_pred ccce--EeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeec
Confidence 5555 499999999999999999999999964 6999999999999987531 23556799999999999983
Q ss_pred --CHHHHHhcccCCC------C--CCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEE
Q 007890 187 --SAFEQAAGLSSIP------F--QWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLR 256 (586)
Q Consensus 187 --~~~~~~~~~~~~~------~--~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlR 256 (586)
....+ ..+...+ . .....++.++|||+.+.. ...+.+++++|++|||+
T Consensus 187 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~---------------------~~~~~l~v~~G~r~Rl~ 244 (340)
T 2bw4_A 187 KDEAGNY-KKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL---------------------TGDHALTAAVGERVLVV 244 (340)
T ss_dssp BCTTSCB-CCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT---------------------SGGGCEEEETTCEEEEE
T ss_pred cccCCcc-cccccccccccchhhHhhcCCCCEEEECCccCCc---------------------cCCCceEcCCCCEEEEE
Confidence 21110 0000000 0 002357899999998741 01247999999988776
Q ss_pred EeecCCcceEEEEeCCCeeEEEecCCcccc-ce-EEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeE
Q 007890 257 ISSLTALSALSFQIEGHNMTVVEADGHNVE-PF-VVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGL 334 (586)
Q Consensus 257 liN~g~~~~~~~~i~gh~~~via~DG~~~~-P~-~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ 334 (586)
++|.+.. .+..++++|.|+|++ ||.++. |. .++++.|.||||+||+|++++ +|+|+++++...... .....
T Consensus 245 n~~~~~~-~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h~---~~Gm~ 317 (340)
T 2bw4_A 245 HSQANRD-TRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEAF---ELGAA 317 (340)
T ss_dssp EEESSSC-BCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHHH---TTSCE
T ss_pred ECCCCCc-cceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC--CeeeEEEcCchHHHH---hCCCE
Confidence 6665433 233458999999997 999885 43 589999999999999999998 699999987653111 12356
Q ss_pred EEEEecC
Q 007890 335 AILNYYP 341 (586)
Q Consensus 335 ail~y~~ 341 (586)
++++|.+
T Consensus 318 ~~~~V~~ 324 (340)
T 2bw4_A 318 GHFKVTG 324 (340)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 8899975
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.7e-42 Score=348.87 Aligned_cols=215 Identities=16% Similarity=0.243 Sum_probs=159.3
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeec----cCCCCCCCCccc--cccCCCCCeEEEEEEc
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQI----GTPWADGTEGVT--QCPILPGETFTYKFVV 134 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~----~~~~~DGv~~~~--q~~i~pG~~~~Y~f~~ 134 (586)
+..+++| ++|||+|++++||+|+|+|+|. +++++||||||++.. +.+++||+++++ ||+|+||++|+|+|++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~-l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNK-AHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEEC-SSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEEC-CCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 3455688 6899999999999999999999 689999999999954 334444444444 7999999999999999
Q ss_pred CC----------Ccceeeeccccc--cccCcceEEEEEECCCC---CCCCCcccccceEEEEecccCCHHHHHhcccCCC
Q 007890 135 DR----------PGTYLYHAHYGM--QREAGLYGSIRVSLPEG---ESEPYAYDYDRSIILNDWFHRSAFEQAAGLSSIP 199 (586)
Q Consensus 135 ~~----------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~---~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 199 (586)
.+ +||||||||... |+.+||+|+|||+++.+ +..+..+|+|++++++||.... +.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc-
Confidence 44 389999999665 88999999999998753 2234456899999999984211 00
Q ss_pred CCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeEEE
Q 007890 200 FQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMTVV 278 (586)
Q Consensus 200 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~vi 278 (586)
+...++.++|||+...+ .+.+++++|++|||||+|+|.. ..+.||++||.|.+
T Consensus 197 --~~~~~~~~~ING~~~~~-----------------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~- 250 (306)
T 1sdd_A 197 --NQTSSLMYTVNGYVNGT-----------------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ- 250 (306)
T ss_dssp --SCCCCEEECSSSCCSSC-----------------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE-
T ss_pred --ccCCCcceeeCCEecCC-----------------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-
Confidence 02246789999998741 2358899999999999999986 56889999999876
Q ss_pred ecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEee
Q 007890 279 EADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIV 322 (586)
Q Consensus 279 a~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~ 322 (586)
||. .+|++.|.||||+||++++++ +|.|++++...
T Consensus 251 --dG~-----~~dtv~l~pger~~v~~~~~~--pG~~~~hch~~ 285 (306)
T 1sdd_A 251 --NHH-----KISAITLVSATSTTANMTVSP--EGRWTIASLIP 285 (306)
T ss_dssp --TTE-----ECSCCCEETTCCBC----------CCCCCBCCST
T ss_pred --CCE-----EcceEEECCCcEEEEEEEcCC--CeEEEEEeCCh
Confidence 873 589999999999999999987 78999987654
No 35
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.4e-39 Score=364.38 Aligned_cols=248 Identities=16% Similarity=0.166 Sum_probs=182.8
Q ss_pred ccceEEEEEEEEEEee--CCCC------------ceeEE--EEE----------------CCCCCCCcEEeecCCEEEEE
Q 007890 39 EARIRRYKWEVKYEYK--SPDC------------FRKVV--ITI----------------NGRTPGPTIQARQNDTVIVE 86 (586)
Q Consensus 39 ~~~~~~~~l~~~~~~~--~~dg------------~~~~~--~~~----------------Ng~~pgP~i~v~~Gd~v~i~ 86 (586)
.+++|+|.+.+++... +|.| ..+++ ..| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4678999999998864 3322 11222 223 34789999999999999999
Q ss_pred EEeCCCCCCeeEEecceeeccCCCCCCCCccc--------cccCCCCCeEEEEEEcCC------Cc----ceeeeccc--
Q 007890 87 LKNSLLTENVAIHWHGIRQIGTPWADGTEGVT--------QCPILPGETFTYKFVVDR------PG----TYLYHAHY-- 146 (586)
Q Consensus 87 v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~--------q~~i~pG~~~~Y~f~~~~------~G----t~wYH~H~-- 146 (586)
|+|+ +++++||||||+++. +++||+++++ ||+|+||++|+|+|++.+ +| |||||||.
T Consensus 83 ~~N~-l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 83 FKNL-ASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp ECCC-SSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEC-CCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 9999 789999999999986 6799999876 999999999999999954 58 99999997
Q ss_pred cccccCcceEEEEEECCCCCCC--CCc-ccccceEEEE------ecccCCHHHHHhcccCCCCCCCCCCcceeecCCCCC
Q 007890 147 GMQREAGLYGSIRVSLPEGESE--PYA-YDYDRSIILN------DWFHRSAFEQAAGLSSIPFQWVGEPQSLLIQGKGRF 217 (586)
Q Consensus 147 ~~q~~~Gl~G~liV~~~~~~~~--p~~-~d~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~ 217 (586)
..|+.+||+|+|||+++..... ... .++|++|+|+ ||+++.......... ...+...++.++|||+..+
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~--~~~~~~~~~~~~iNG~~~~ 237 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA--SSEVKNSHEFHAINGMIYN 237 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSC
T ss_pred cccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC--CcchhhcCceeccCCEecC
Confidence 5789999999999999864211 112 2589999999 788765432111111 1111335789999999863
Q ss_pred CCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcc-eEEEEeCCCeeEEEecCCccccceEEeEEEEc
Q 007890 218 NCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALS-ALSFQIEGHNMTVVEADGHNVEPFVVQNLFIY 296 (586)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~ 296 (586)
.+.+++++|++|||||+|++... .|.||+|||.|+||+.||. .++++.|+
T Consensus 238 ------------------------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~ 288 (647)
T 1sdd_B 238 ------------------------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLL 288 (647)
T ss_dssp ------------------------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEEC
T ss_pred ------------------------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEEC
Confidence 13689999999999999999864 7999999999999999864 78999999
Q ss_pred cCceEEEEEEeCCCCCCceEEEEEee
Q 007890 297 SGETYSVLIKADQNPTRNYWATTNIV 322 (586)
Q Consensus 297 pGqR~dVlv~~~~~~~g~y~l~~~~~ 322 (586)
||||+||+|++++ +|.|.++++..
T Consensus 289 pg~r~~v~~~~~~--pG~w~~hch~~ 312 (647)
T 1sdd_B 289 PGSFKTLEMKASK--PGWWLLDTEVG 312 (647)
T ss_dssp TTEEEEEEEECCS--SEEEEEECCCH
T ss_pred CCeEEEEEEEecc--ceEeecccCcc
Confidence 9999999999987 68999887764
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.1e-38 Score=339.31 Aligned_cols=266 Identities=23% Similarity=0.270 Sum_probs=210.8
Q ss_pred ccceEEEEEEEEEEeeCC-CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCC-CCCeeEEecceeeccCCCCCCCCc
Q 007890 39 EARIRRYKWEVKYEYKSP-DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLL-TENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 39 ~~~~~~~~l~~~~~~~~~-dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
.+.++.|+|++....... +|..+.+|+|||++|||+|++++||+++|+|+|.+. ...++|||||+.. +||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 345678888877665554 688889999999999999999999999999999953 3689999999853 689886
Q ss_pred cccccCCCCCeEEEEEEcCCCcceeeeccc---cccccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHh
Q 007890 117 VTQCPILPGETFTYKFVVDRPGTYLYHAHY---GMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAA 193 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~ 193 (586)
.+ .|.||++++|.|+++++||||||||. ..|+.+||+|+|+|+++.. .| .+|+|++++++||++........
T Consensus 235 ~~--~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 235 FT--QTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp GC--CBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCE
T ss_pred cE--EeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccc
Confidence 54 49999999999999999999999995 3788999999999998643 23 46889999999998753210000
Q ss_pred ccc-CCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCC
Q 007890 194 GLS-SIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEG 272 (586)
Q Consensus 194 ~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g 272 (586)
... .........++.++|||+.++.+. ...+.+++|++|||||+|++....|.|||+|
T Consensus 310 ~~~~~~~~~~~~~~~~~~iNG~~~~~~~---------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhG 368 (447)
T 2dv6_A 310 EQEMDYEKLINEKPEYFLFNGSVGSLTR---------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIG 368 (447)
T ss_dssp ECCBBHHHHHTTCCSEEEETTSTTCCCC---------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEET
T ss_pred cccCChHHhhccCCCEEEECCcccCCCC---------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcC
Confidence 000 000000235688999999886211 1368999999999999999987889999999
Q ss_pred CeeEEEecCCccccc-e-EEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecCCCCCCCCCeEEEEEecC
Q 007890 273 HNMTVVEADGHNVEP-F-VVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSRNATFTTPPGLAILNYYP 341 (586)
Q Consensus 273 h~~~via~DG~~~~P-~-~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~~~~~~~~~~~ail~y~~ 341 (586)
|.|+||+.||.+++| . ..|++.|.||||++|+|++++ +|.|+|++...... .....++++|.+
T Consensus 369 h~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~--pG~~~~hch~~~h~----~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 369 EIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR--AGRYILVDHALSRL----EHGLVGFLNVDG 433 (447)
T ss_dssp CCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCS--CEEEEEEESSGGGG----GGTCCEEEEECS
T ss_pred cEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCC--CEEEEEEecCcCcc----ccCCEEEEEEeC
Confidence 999999999999864 4 589999999999999999987 79999999776542 224578999974
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.7e-39 Score=365.73 Aligned_cols=249 Identities=16% Similarity=0.167 Sum_probs=193.8
Q ss_pred cccceEEEEEEEEEEe--eCCCCc---------------eeEE-E-EE-----CC-----------CCCCCcEEeecCCE
Q 007890 38 AEARIRRYKWEVKYEY--KSPDCF---------------RKVV-I-TI-----NG-----------RTPGPTIQARQNDT 82 (586)
Q Consensus 38 ~~~~~~~~~l~~~~~~--~~~dg~---------------~~~~-~-~~-----Ng-----------~~pgP~i~v~~Gd~ 82 (586)
..+.+|+|.|.+++.. ++|++. .+++ + .| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 3678999999999986 366653 1222 2 22 22 58999999999999
Q ss_pred EEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcC----------CCcceeeeccccc--cc
Q 007890 83 VIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVD----------RPGTYLYHAHYGM--QR 150 (586)
Q Consensus 83 v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~----------~~Gt~wYH~H~~~--q~ 150 (586)
|+|+|+|+ ++++++|||||+++..+.+ ||+++ +||+|+||++|+|+|++. ++||||||||... |+
T Consensus 209 v~v~~~N~-l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~ 285 (770)
T 2r7e_B 209 IMVTFRNQ-ASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDV 285 (770)
T ss_dssp EEEEEECC-SSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHH
T ss_pred EEEEEEEC-CCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHH
Confidence 99999999 7899999999999986543 69998 899999999999999996 8999999999765 78
Q ss_pred cCcceEEEEEECCCCCCC---CCcccccceEEEEe------cccCCHHHHHhcccCCC-------CCCCCCCcceeecCC
Q 007890 151 EAGLYGSIRVSLPEGESE---PYAYDYDRSIILND------WFHRSAFEQAAGLSSIP-------FQWVGEPQSLLIQGK 214 (586)
Q Consensus 151 ~~Gl~G~liV~~~~~~~~---p~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~liNG~ 214 (586)
.+||+|+|||+++..... +..+++|++|++++ |+++.... .+...+ ..+....+.++|||+
T Consensus 286 ~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~ 362 (770)
T 2r7e_B 286 HSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGY 362 (770)
T ss_dssp HTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSC
T ss_pred hCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCc
Confidence 999999999999864211 12347899888753 55542211 010000 011123456889999
Q ss_pred CCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeEEEecCCccccceEEeEE
Q 007890 215 GRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMTVVEADGHNVEPFVVQNL 293 (586)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l 293 (586)
... ..+.+++++|++|||||+|++.. ..|.|||+||.|+|++.||. .+|++
T Consensus 363 ~~~-----------------------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv 414 (770)
T 2r7e_B 363 IMD-----------------------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALY 414 (770)
T ss_dssp TTT-----------------------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEE
T ss_pred cCC-----------------------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEE
Confidence 763 12357899999999999999865 47999999999999999974 88999
Q ss_pred EEccCceEEEEEEeCCCCCCceEEEEEee
Q 007890 294 FIYSGETYSVLIKADQNPTRNYWATTNIV 322 (586)
Q Consensus 294 ~l~pGqR~dVlv~~~~~~~g~y~l~~~~~ 322 (586)
.|.||||++|+|++++ +|.|.+.++..
T Consensus 415 ~l~Pg~~~~v~~~ad~--pG~w~~hcH~~ 441 (770)
T 2r7e_B 415 NLYPGVFETVEMLPSK--AGIWRVECLIG 441 (770)
T ss_dssp ECCTTCCCEEEECCSS--CBCCCBCCCSH
T ss_pred EECCCeEEEEEEEeCC--CCceEEEeccc
Confidence 9999999999999987 78998887653
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4e-36 Score=337.86 Aligned_cols=219 Identities=20% Similarity=0.267 Sum_probs=169.0
Q ss_pred CCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCC-----CCCccccccCCCCCeEEEEEEc-CCCc----
Q 007890 69 RTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWAD-----GTEGVTQCPILPGETFTYKFVV-DRPG---- 138 (586)
Q Consensus 69 ~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~D-----Gv~~~~q~~i~pG~~~~Y~f~~-~~~G---- 138 (586)
.+|||+||+++||+|+|+|+|+ +++++||||||+++. ++|+| |+++++||+|+||++|+|+|++ +++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~-l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQ-ASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECC-SSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred CCCCCeEEEECCCEEEEEEEeC-CCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 5799999999999999999999 789999999999985 46766 5667889999999999999999 4444
Q ss_pred -----ceeeecccc--ccccCcceEEEEEECCCCC---CCCCcccccceEEEEe------cccCCHHHHHhcccCCCCC-
Q 007890 139 -----TYLYHAHYG--MQREAGLYGSIRVSLPEGE---SEPYAYDYDRSIILND------WFHRSAFEQAAGLSSIPFQ- 201 (586)
Q Consensus 139 -----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~---~~p~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~~~- 201 (586)
|||||||.. .|+.+||+|+|||+++.+. ..+..+|+|++|++++ |++......... ......
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~-~p~~v~~ 604 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLP-NPAGVQL 604 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSS-SSSCSCC
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhccc-Cchhccc
Confidence 999999954 4678999999999987531 1234568999999965 444322111100 000000
Q ss_pred ----CCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeE
Q 007890 202 ----WVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMT 276 (586)
Q Consensus 202 ----~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~ 276 (586)
+......++|||+...+ . .+.+++|++|||||+|+|.. ..|.|||+||.|+
T Consensus 605 ~~~~~~~~~~~~~ING~~~~~-----------------------~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~ 660 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFDS-----------------------L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFK 660 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSSC-----------------------C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCC
T ss_pred ccccccccCceeeecCcCCCC-----------------------C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEE
Confidence 00011246899997641 1 27899999999999998764 4689999999999
Q ss_pred EEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeecC
Q 007890 277 VVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVSR 324 (586)
Q Consensus 277 via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~~ 324 (586)
|+ |..+|++.|.||||++|+|++++ +|.|.+.+.....
T Consensus 661 v~--------~~~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~~~H 698 (742)
T 2r7e_A 661 HK--------MVYEDTLTLFPFSGETVFMSMEN--PGLWILGCHNSDF 698 (742)
T ss_dssp CB--------SSSBCSSCCCCCSSEECCEECCC--CCCSCCEECCCST
T ss_pred Ee--------ccceeEEEECCCcEEEEEEEcCC--CeEEEEEeCCchH
Confidence 86 56889999999999999999987 7999999877643
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=8.6e-29 Score=249.46 Aligned_cols=218 Identities=18% Similarity=0.197 Sum_probs=155.4
Q ss_pred eEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEee
Q 007890 243 YVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIV 322 (586)
Q Consensus 243 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~ 322 (586)
++|++++|+++++|+.|.... .+.+|++|.. ..+.||.+. .+...|.||+++++.+++++ +|+||..+...
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 489999999999999998755 6899999975 457899864 23457899999999999965 89999998664
Q ss_pred cC-CCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeee-cCC-
Q 007890 323 SR-NATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQN-NVS- 399 (586)
Q Consensus 323 ~~-~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~- 399 (586)
.. .. ......+.+.+.+... .+ ..++++.+....- ..+
T Consensus 137 ~~~~~--~~~Gl~G~liV~~~~~----------~~---------------------------~~d~e~~l~~~d~~~~~g 177 (288)
T 3gdc_A 137 PLAPH--IAKGLYGGFIVEPKEG----------RP---------------------------PADDEMVMVMNGYNTDGG 177 (288)
T ss_dssp SHHHH--HHTTCEEEEEEECSSC----------CC---------------------------CCSEEEEEEEEEECCSST
T ss_pred chHHH--HhCcCeEEEEEeCCcc----------CC---------------------------CCcceEEEEEeeEecCCC
Confidence 20 00 0112334444432110 00 0123332222110 001
Q ss_pred -CeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCC
Q 007890 400 -GNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNAN 478 (586)
Q Consensus 400 -g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~ 478 (586)
....|.|||+.|... .. .+.++.|++|+|.|.|.+
T Consensus 178 ~~~~~~~iNG~~~~~~-------------------~~-------------------------~l~v~~Ge~vr~~l~N~g 213 (288)
T 3gdc_A 178 DDNEFYSVNGLPFHFM-------------------DF-------------------------PVKVKQHELVRIHLINVL 213 (288)
T ss_dssp TCCSEEEETTSTTHHH-------------------HS-------------------------CEEEETTCCEEEEEEECC
T ss_pred CCcceEEECccccccc-------------------Cc-------------------------ccccCCCCEEEEEEEeCC
Confidence 134688999865310 00 178899999999999987
Q ss_pred CCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhh
Q 007890 479 SLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFY 558 (586)
Q Consensus 479 ~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d 558 (586)
.. ...||||||||.|+|++.|. . +..+.++||+.|+|++++.|+|++++||.|+||||+++|++
T Consensus 214 ~~----~~~H~fHlhG~~f~v~~~g~--~----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~ 277 (288)
T 3gdc_A 214 EY----DPINSFHIHGNFFHYYPTGT--M----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAE 277 (288)
T ss_dssp CS----SSEEEEEETTCCEEEEETTC--C----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHT
T ss_pred CC----CcceeEEEcCCEEEEEcCCC--c----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHh
Confidence 43 12599999999999987432 1 23458999999999999999999999999999999999999
Q ss_pred cCceEEEecc
Q 007890 559 MGMGVVFAEG 568 (586)
Q Consensus 559 ~GM~~~~~~~ 568 (586)
.|||..|.+.
T Consensus 278 ~GM~~~~~V~ 287 (288)
T 3gdc_A 278 LGWMGFFEVS 287 (288)
T ss_dssp TTCEEEEEEE
T ss_pred cCCCEEEEEe
Confidence 9999999764
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=2.8e-28 Score=251.46 Aligned_cols=232 Identities=22% Similarity=0.241 Sum_probs=149.5
Q ss_pred eEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEec---CCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEE
Q 007890 243 YVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEA---DGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATT 319 (586)
Q Consensus 243 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~---DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~ 319 (586)
++|++++|+++|+||+|.... .+.+|. |-+.+.+. ||.+. ++...|.|||||++.+++++ +|+||+++
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~-~~siH~--HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL-PHTIHW--HGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS-CBCCEE--ETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC-CccEEe--CCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 489999999999999999854 344444 55666664 99853 23467999999999999976 79999997
Q ss_pred EeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCC
Q 007890 320 NIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVS 399 (586)
Q Consensus 320 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 399 (586)
....... .......+.+.+.+.... . ++...+ .++...+.+........+... . ....
T Consensus 106 H~~~~~q-~~~~Gl~G~liV~p~~~~-----~---~~~~~d----~e~~l~l~d~~~~~~~~~~~~--------g-~~~~ 163 (339)
T 2zwn_A 106 HVNVNEH-VGVRGMWGPLIVDPKQPL-----P---IEKRVT----KDVIMMMSTWESAVADKYGEG--------G-TPMN 163 (339)
T ss_dssp CSSHHHH-TTTSCCEEEEEEECSSCC-----T---TGGGCS----EEEEEEEEEECGGGTTCTTCC--------C-STTS
T ss_pred cCCchhh-hhcCCceEeEEecCCCcc-----c---ccccCC----ceEEEEeeheecccccccCCC--------C-CCcc
Confidence 6532111 010122333333321110 0 000000 001000100000000000000 0 0000
Q ss_pred CeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCC
Q 007890 400 GNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANS 479 (586)
Q Consensus 400 g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~ 479 (586)
....|.|||+.+.. . ..+.++.|++++|+|+|.+.
T Consensus 164 ~~~~~~ING~~~~~--------------------~-------------------------~~~~v~~G~~vrlrliN~~~ 198 (339)
T 2zwn_A 164 VADYFSVNAKSFPL--------------------T-------------------------QPLRVKKGDVVKIRFFGAGG 198 (339)
T ss_dssp CCCEEEETTBCTTS--------------------S-------------------------CCEEECTTCEEEEEEEECSS
T ss_pred ccceEEEccccCCC--------------------c-------------------------ccEEECCCCEEEEEEEeCCC
Confidence 12367888875421 0 01788999999999999876
Q ss_pred CCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhh---
Q 007890 480 LSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESH--- 556 (586)
Q Consensus 480 ~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H--- 556 (586)
. .||||||||.|+|++..... +.+|.++||+.|+||+++.|+|++|+||.|++|||+++|
T Consensus 199 ~------~h~~hlhGh~f~vi~~DG~~-----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 199 G------IHAMHSHGHDMLVTHKDGLP-----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp S------CEEEEETTCCEEEEEETTEE-----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred c------eEEEEECCcEEEEEEeCCee-----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 5 89999999999999984222 224678999999999999999999999999999999999
Q ss_pred ---hhcCceEEEec
Q 007890 557 ---FYMGMGVVFAE 567 (586)
Q Consensus 557 ---~d~GM~~~~~~ 567 (586)
++.||++++..
T Consensus 262 ~~~~~~gm~a~l~~ 275 (339)
T 2zwn_A 262 GGKHPGGPITVIEY 275 (339)
T ss_dssp TTBSSCSSEEEEEE
T ss_pred ccccCCCcEEEEEE
Confidence 88999999954
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=8.7e-28 Score=245.12 Aligned_cols=233 Identities=19% Similarity=0.219 Sum_probs=153.4
Q ss_pred eEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEE-EecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEe
Q 007890 243 YVITVIPGKTYRLRISSLTALSALSFQIEGHNMTV-VEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNI 321 (586)
Q Consensus 243 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~ 321 (586)
|+|++++|+++++|+.|.... .+.+|++|....- .+.||.+. +....|.||++++..+++++ +|+||..++.
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 489999999999999998754 6888888876542 36899853 23357899999999999976 7999998765
Q ss_pred ecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCC-CcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCC
Q 007890 322 VSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGP-LWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSG 400 (586)
Q Consensus 322 ~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g 400 (586)
..... .......+.|.+.+.... + .+ ..+ .++...+.+......... .. .......
T Consensus 107 ~~~~~-~~~~Gl~G~lIV~~~~~~-------~-~~~~~d-----~e~~l~l~dw~~~~~~~~-~~--------~~~~~~~ 163 (318)
T 3g5w_A 107 NVNEH-VTMRGMWGPLIVEPKNPL-------P-IEKTVT-----KDYILMLSDWVSSWANKP-GE--------GGIPGDV 163 (318)
T ss_dssp SHHHH-HHHSCCEEEEEEECSSCC-------H-HHHTCC-----EEEEEEEEEECGGGTTCT-TC--------CCCTTCC
T ss_pred Chhhh-hccCCCEEEEEEcCCCcc-------c-cccccc-----ceeEEEEEeecccccccc-cc--------CCCCCCc
Confidence 32110 000122333444421100 0 00 000 001111111000000000 00 0000001
Q ss_pred eEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCC
Q 007890 401 NVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSL 480 (586)
Q Consensus 401 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~ 480 (586)
...|.|||+.|.. .. .+.++.|++|+|+|+|.+..
T Consensus 164 ~d~~~ING~~~~~--------------------~~-------------------------~l~v~~G~~vrlrliN~~~~ 198 (318)
T 3g5w_A 164 FDYYTINAKSFPE--------------------TQ-------------------------PIRVKKGDVIRLRLIGAGDH 198 (318)
T ss_dssp CCEEEETTBCBTS--------------------SC-------------------------CEEECTTCEEEEEEEECSSS
T ss_pred CcEEEEcCcCCCC--------------------Cc-------------------------cEEeCCCCEEEEEEEeCCCc
Confidence 2368889886421 01 17889999999999998766
Q ss_pred CCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhhh--
Q 007890 481 SNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHFY-- 558 (586)
Q Consensus 481 ~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d-- 558 (586)
.||||||||.|+|++...+. +.+|.++||+.|+|++++.|+|+++|||.|+||||+++|++
T Consensus 199 ------~h~~hlhGh~f~vi~~dG~~-----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g 261 (318)
T 3g5w_A 199 ------VHAIHTHGHISQIAFKDGFP-----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNG 261 (318)
T ss_dssp ------CEEEEETTSCEEEEEETTEE-----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBT
T ss_pred ------eEEEEECCcEEEEEecCCcc-----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhcc
Confidence 89999999999999984322 22477999999999999999999999999999999999998
Q ss_pred ----cCceEEEec
Q 007890 559 ----MGMGVVFAE 567 (586)
Q Consensus 559 ----~GM~~~~~~ 567 (586)
.|||.+|.+
T Consensus 262 ~~~~~Gm~~~i~~ 274 (318)
T 3g5w_A 262 DKPDGGIMTTIEY 274 (318)
T ss_dssp TBSSCBSEEEEEE
T ss_pred CcCCCCCEEEEEE
Confidence 588988865
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=1.5e-24 Score=220.32 Aligned_cols=228 Identities=13% Similarity=0.123 Sum_probs=131.6
Q ss_pred EEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCcccc----ceEEeEEEEccCceEEEEEEeCCCC--------
Q 007890 244 VITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVE----PFVVQNLFIYSGETYSVLIKADQNP-------- 311 (586)
Q Consensus 244 ~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~----P~~~~~l~l~pGqR~dVlv~~~~~~-------- 311 (586)
+|++++|+++++||+|... ..+.+|.||..+.. +.||.+.. +...+...|.||||++..+++++..
T Consensus 61 ~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~ 138 (306)
T 1sdd_A 61 TLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPP 138 (306)
T ss_dssp CEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCS
T ss_pred EEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCC
Confidence 7999999999999999764 46888888877432 68998652 2233357799999999999998732
Q ss_pred CCceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEE
Q 007890 312 TRNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVM 391 (586)
Q Consensus 312 ~g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 391 (586)
.|+||.++....... ......-+++......... .+..+..+ .++...+..... ....
T Consensus 139 ~GT~wYHsH~~~~~q-~~~GL~G~liV~~~~~~~~-----~~~~~~~d-----~e~~l~~~d~d~-~~~~---------- 196 (306)
T 1sdd_A 139 CLTHIYYSYVNLVED-FNSGLIGPLLICKKGTLTE-----DGTQKMFE-----KQHVLMFAVFDE-SKSW---------- 196 (306)
T ss_dssp EEEEEEECCSSSHHH-HHTTCCEEEEEECTTCBCT-----TSSBSSSC-----CCCCCBCCEEET-TSSS----------
T ss_pred ceEEEEeccCCchhh-hccCceEEEEEccCCCCCc-----cCCcCccc-----ceEEEEEEeccc-cccc----------
Confidence 279999987432100 0111122344433211110 00000000 000000000000 0000
Q ss_pred EeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEE
Q 007890 392 LNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVD 471 (586)
Q Consensus 392 ~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve 471 (586)
.......|.|||+.+.. .|. +.++.|++++
T Consensus 197 -----~~~~~~~~~ING~~~~~---------------------~p~------------------------l~v~~G~~vr 226 (306)
T 1sdd_A 197 -----NQTSSLMYTVNGYVNGT---------------------MPD------------------------ITVCAHDHIS 226 (306)
T ss_dssp -----SCCCCEEECSSSCCSSC---------------------CCC------------------------CCCCCC----
T ss_pred -----ccCCCcceeeCCEecCC---------------------Ccc------------------------eEEcCCCEEE
Confidence 00112357788875410 111 6778999999
Q ss_pred EEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEee
Q 007890 472 IILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHC 551 (586)
Q Consensus 472 ~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HC 551 (586)
|+|.|.+.. ...||||+|||.|++ .| .++||+.|.||+.+.|+|++++||.|+|||
T Consensus 227 lrliN~g~~----~~~h~~hlhG~~~~~----dG----------------~~~dtv~l~pger~~v~~~~~~pG~~~~hc 282 (306)
T 1sdd_A 227 WHLIGMSSG----PELFSIHFNGQVLEQ----NH----------------HKISAITLVSATSTTANMTVSPEGRWTIAS 282 (306)
T ss_dssp --BBCCCSS----SCEECCBCSSTTCEE----TT----------------EECSCCCEETTCCBC--------CCCCCBC
T ss_pred EEEEeCCCC----CccEEEEECCcEeee----CC----------------EEcceEEECCCcEEEEEEEcCCCeEEEEEe
Confidence 999998652 126999999999986 11 358999999999999999999999999999
Q ss_pred cchhhhhcCceEEEeccc
Q 007890 552 HIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 552 Hil~H~d~GM~~~~~~~~ 569 (586)
|+++|++.|||++|.+.+
T Consensus 283 h~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 283 LIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp CSTTTGGGTCBCCC----
T ss_pred CChHHHhcCCeEEEEEec
Confidence 999999999999998764
No 43
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=3.2e-22 Score=223.80 Aligned_cols=243 Identities=16% Similarity=0.188 Sum_probs=145.2
Q ss_pred CceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCcccc---c-eEEeEEEEccCceEEEEEEeCCCC----C
Q 007890 241 SPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVE---P-FVVQNLFIYSGETYSVLIKADQNP----T 312 (586)
Q Consensus 241 ~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~---P-~~~~~l~l~pGqR~dVlv~~~~~~----~ 312 (586)
..|+|++++|+++++||.|.... .+.+|.||.... .+.||.+.. | ..+....|.||++++..+++++.. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 34689999999999999999754 678888887664 478998642 1 223456899999999999998732 4
Q ss_pred C----ceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCcccccccccccc------ccCCCCCCCC
Q 007890 313 R----NYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIK------ARKGFIIPPP 382 (586)
Q Consensus 313 g----~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~------~~~~~~~~~p 382 (586)
| +||.+++...... .......++|......... .+..|. ++. ++...+. +... ....
T Consensus 145 G~~c~T~wYHsH~~~~~q-~~~GL~G~lIV~~~~~~~~-----~~~~~~-~~~----e~~l~l~~~d~~~~w~~-~~~~- 211 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD-IHSGLIGPLLICRKGTLDK-----ETNMPV-DMR----EFVLLFMVFDEKKSWYY-DKKP- 211 (647)
T ss_dssp SCSEEEEEEECCSSHHHH-HTTTCEEEEEEECTTSSCT-----TSCCCS-SCC----EEEEEEEEEEGGGSSCC-C----
T ss_pred CCCceEEEEccCCCCccc-ccccCccCEEEeeCCCccc-----ccCCCC-cce----eEEEEEEeecCcccccc-ccCc-
Confidence 7 9999987632111 0111122333333211110 000111 110 1111111 1100 0000
Q ss_pred CCCceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEE
Q 007890 383 QSADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVY 462 (586)
Q Consensus 383 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (586)
...+... ..........+.|||..+.. | .+
T Consensus 212 ---~~~~~~~-~~~~~~~~~~~~iNG~~~~~----------------------p------------------------~l 241 (647)
T 1sdd_B 212 ---TRSWRRA-SSEVKNSHEFHAINGMIYNL----------------------P------------------------GL 241 (647)
T ss_dssp ----------------CCCEEEEETTBSSCC----------------------C------------------------CC
T ss_pred ---ccccccC-CcchhhcCceeccCCEecCC----------------------C------------------------Ce
Confidence 0000000 00000112467788875410 1 17
Q ss_pred EecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeC
Q 007890 463 RLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRAD 542 (586)
Q Consensus 463 ~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~ad 542 (586)
.++.|++|+|+|+|.+.. ...||||+|||.|+|++. ++.++||+.|.||+++.|+|+++
T Consensus 242 ~v~~G~~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l~pg~r~~v~~~~~ 300 (647)
T 1sdd_B 242 RMYEQEWVRLHLLNLGGS----RDIHVVHFHGQTLLENGT-----------------QQHQLGVWPLLPGSFKTLEMKAS 300 (647)
T ss_dssp EEETTCEEEEEEEECCCT----TCCEEEEETTCCEEECSS-----------------SCEEESSEEECTTEEEEEEEECC
T ss_pred EEcCCCEEEEEEEeCCCC----CcceeEEEcCcEEEEecC-----------------CCcccceEEECCCeEEEEEEEec
Confidence 889999999999998642 127999999999999864 24689999999999999999999
Q ss_pred CceeeEEeecchhhhhcCceEEEeccc
Q 007890 543 NPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 543 npG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+||.|+||||+++|++.|||++|.+.+
T Consensus 301 ~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 301 KPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp SSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred cceEeecccCcccccccccccceeeec
Confidence 999999999999999999999998743
No 44
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=9e-21 Score=194.34 Aligned_cols=235 Identities=14% Similarity=0.073 Sum_probs=148.7
Q ss_pred eEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEe
Q 007890 243 YVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNI 321 (586)
Q Consensus 243 ~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~ 321 (586)
++|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++++.+++++ +|+||.+++.
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 46888888863 6788752 124899999999999987 7999999764
Q ss_pred ecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCe
Q 007890 322 VSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGN 401 (586)
Q Consensus 322 ~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 401 (586)
......... ...+.+.+.+.. . +|.++. +....+.+... ... . ..................
T Consensus 138 ~~~~~~~~~-Gl~G~~iV~~~~-------~---~p~~d~-----e~~l~~~d~~~-~~~-~-~~~g~~~~~~~~~~~~~~ 198 (327)
T 1kbv_A 138 APVGMHIAN-GMYGLILVEPKE-------G---LPKVDK-----EFYIVQGDFYT-KGK-K-GAQGLQPFDMDKAVAEQP 198 (327)
T ss_dssp SSHHHHHHT-TCEEEEEEECTT-------C---CCCCSE-----EEEEEEEEECB-SSC-T-TCCEEECBCHHHHHHTCC
T ss_pred CChhhhhhc-ceEEEEEEecCC-------C---CCCCce-----EEEEEeeeeec-cCc-c-ccccccccChhHhccCCC
Confidence 210000001 122333333211 0 111111 00001111110 000 0 000000000000000011
Q ss_pred EEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCC
Q 007890 402 VRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLS 481 (586)
Q Consensus 402 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~ 481 (586)
..+.|||+.+... ....+.++.|++++|+|.|.+..
T Consensus 199 ~~~~iNG~~~~~~-------------------------------------------~~~~l~v~~G~~vRlRliN~~~~- 234 (327)
T 1kbv_A 199 EYVVFNGHVGALT-------------------------------------------GDNALKAKAGETVRMYVGNGGPN- 234 (327)
T ss_dssp SEEEETTSTTTTS-------------------------------------------GGGCEEEETTEEEEEEEEEEESS-
T ss_pred ceEEEcCcccCCC-------------------------------------------CceeEEeCCCCEEEEEEECCCCC-
Confidence 3567777754210 00128899999999999997643
Q ss_pred CCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhhh-hcC
Q 007890 482 NKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESHF-YMG 560 (586)
Q Consensus 482 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~-d~G 560 (586)
..|+||||||.|+|++...+. .+|.++|++.|.||+.+.|.|++++||.|++|||+.+|. ..|
T Consensus 235 ----~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 235 ----LVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp ----CCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred ----CceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 279999999999999885432 126789999999999999999999999999999999995 889
Q ss_pred ceEEEecc
Q 007890 561 MGVVFAEG 568 (586)
Q Consensus 561 M~~~~~~~ 568 (586)
|++++.+.
T Consensus 299 ~~a~l~~~ 306 (327)
T 1kbv_A 299 ALGQLKVE 306 (327)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEC
Confidence 99988653
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.84 E-value=3.3e-20 Score=191.62 Aligned_cols=88 Identities=25% Similarity=0.299 Sum_probs=74.9
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCC--cceeEEeCCCCEEEEEE
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPI--MKNTVPVHRYGWTALRF 539 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~rDTv~vpp~g~v~irf 539 (586)
+.++.|++++|++.|.+.. .|++|+|||.|+|+. .|.+. +++ ++||+.|++|+.+.|.|
T Consensus 233 l~v~~G~r~Rl~n~~~~~~------~~~~~i~gh~~~Vi~--dG~~~-----------~~p~~~~dtv~l~pGer~~v~v 293 (340)
T 2bw4_A 233 LTAAVGERVLVVHSQANRD------TRPHLIGGHGDYVWA--TGKFR-----------NPPDLDQETWLIPGGTAGAAFY 293 (340)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT-----------SCCEEEESCCCBCTTEEEEEEE
T ss_pred eEcCCCCEEEEEECCCCCc------cceEEecCcceEEeC--CCccc-----------CCccccceEEEeCCCceEEEEE
Confidence 8899999999888776655 789999999999986 33321 223 57999999999999999
Q ss_pred EeCCceeeEEeecch-hhhhcCceEEEecc
Q 007890 540 RADNPGAWAFHCHIE-SHFYMGMGVVFAEG 568 (586)
Q Consensus 540 ~adnpG~w~~HCHil-~H~d~GM~~~~~~~ 568 (586)
++++||.|+||||++ +|++.|||+.|.+.
T Consensus 294 ~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 294 TFRQPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred ECCCCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 999999999999999 59999999999664
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=7.2e-22 Score=222.45 Aligned_cols=242 Identities=12% Similarity=0.088 Sum_probs=148.2
Q ss_pred CceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCC--------CC
Q 007890 241 SPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQN--------PT 312 (586)
Q Consensus 241 ~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~--------~~ 312 (586)
..|+|+++.|+++++++.|... ..+.+|.||..+....-||.+- ....|.||++++..+++++. ..
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 4568999999999999999975 4788999988766544468742 12468999999999998741 35
Q ss_pred CceEEEEEeecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCcccccc---ccc----ccc-ccCCCCCCCCCC
Q 007890 313 RNYWATTNIVSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLN---QSL----AIK-ARKGFIIPPPQS 384 (586)
Q Consensus 313 g~y~l~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~---~~~----~~~-~~~~~~~~~p~~ 384 (586)
|+||.+++...... ......+.|.+.+.... .....+ +. .+...... +.. -+. ....+.. .|..
T Consensus 271 Gt~wYHsh~~~~~q--~~~GL~G~liV~~~~~~--~~~~~~--~~-~d~E~vl~~~~~de~~swy~~~~~~~~~~-~p~~ 342 (770)
T 2r7e_B 271 KAWAYSSDVDLEKD--VHSGLIGPLLVCHTNTL--NPAHGR--QV-TVQEFALFFTIFDETKSWYFTENMERNCR-APCN 342 (770)
T ss_dssp EEEEECCCSSSSHH--HHTSCCEEEEEECSTTS--CSSSCC--CC-SSEEEECCCCEECCSSSSCTTGGGSSCSC-CSSC
T ss_pred eeEEeeccCCcHHH--HhCCceeeEEECCCccc--ccccCC--Cc-cceEEEEEEeecCccccchhccchhhccc-Cccc
Confidence 89999876533110 01122333333322110 000000 00 00000000 000 000 0000000 0000
Q ss_pred CceEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEe
Q 007890 385 ADRMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRL 464 (586)
Q Consensus 385 ~~~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (586)
... ...........|.|||..+. .. ..+.+
T Consensus 343 ~~~-----~d~~~~~~~~~~~ING~~~~--------------------~~-------------------------~~l~v 372 (770)
T 2r7e_B 343 IQM-----EDPTFKENYRFHAINGYIMD--------------------TL-------------------------PGLVM 372 (770)
T ss_dssp CCS-----SSSSSTTTSCEECTTSCTTT--------------------TC-------------------------CCCCC
T ss_pred ccc-----CCccccccCCccccCCccCC--------------------CC-------------------------CCeEE
Confidence 000 00000011124566665431 00 11678
Q ss_pred cCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCc
Q 007890 465 NFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNP 544 (586)
Q Consensus 465 ~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnp 544 (586)
+.|++|+|+|+|.+.. ...||||||||.|+|++.+ +.++||+.|+|++++.|+|++|+|
T Consensus 373 ~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~p 431 (770)
T 2r7e_B 373 AQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSKA 431 (770)
T ss_dssp CSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSSC
T ss_pred eCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCCC
Confidence 8999999999997643 1379999999999998752 238999999999999999999999
Q ss_pred eeeEEeecchhhhhcCceEEEec
Q 007890 545 GAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 545 G~w~~HCHil~H~d~GM~~~~~~ 567 (586)
|.|+||||+++|++.|||+.|.|
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCB
T ss_pred CceEEEecccccccccccccccc
Confidence 99999999999999999999977
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.81 E-value=1.1e-18 Score=179.48 Aligned_cols=89 Identities=19% Similarity=0.166 Sum_probs=72.0
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCC-cceeEEeCCCCEEEEEEE
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPI-MKNTVPVHRYGWTALRFR 540 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~-~rDTv~vpp~g~v~irf~ 540 (586)
+.++.|++++|++.|.+.. .|++++|+|.|+|++ .|.+. ..|. ++||+.|.||+.+.|.|+
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEEE
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEEE
Confidence 8899999999887775543 445557888899887 34332 1122 689999999999999999
Q ss_pred eCCceeeEEeecchhhh-hcCceEEEecc
Q 007890 541 ADNPGAWAFHCHIESHF-YMGMGVVFAEG 568 (586)
Q Consensus 541 adnpG~w~~HCHil~H~-d~GM~~~~~~~ 568 (586)
+++||.|+||||++.|+ +.|||++|.+.
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 99999999999999997 99999999764
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.77 E-value=4.3e-18 Score=182.08 Aligned_cols=235 Identities=13% Similarity=0.052 Sum_probs=148.5
Q ss_pred eEEEEeCCcEEEEEEeecCCc-ceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEe
Q 007890 243 YVITVIPGKTYRLRISSLTAL-SALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNI 321 (586)
Q Consensus 243 ~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~ 321 (586)
++|+++.|++++||+.|.... ..+.+|+||+. ..||... ...|.||+++++.+++++ +|+||++++.
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 379999999999999998642 57899999975 4688643 125899999999999976 7999999853
Q ss_pred ecCCCCCCCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCceEEEEEeeeecCCCe
Q 007890 322 VSRNATFTTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSADRMIVMLNTQNNVSGN 401 (586)
Q Consensus 322 ~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 401 (586)
...... ......+.+.+.+... .|.++ .++...+.+... ..... .. ....+..........
T Consensus 128 ~~~~~~-~~~Gl~G~~iv~~~~~----------~~~~d-----~e~~l~l~d~~~-~~~~~-~~-~~~~~~~~~~~~~~~ 188 (442)
T 2zoo_A 128 APVGMH-IANGMYGLILVEPKEG----------LAPVD-----REYYLVQGDFYT-KGEFG-EA-GLQPFDMAKAIDEDA 188 (442)
T ss_dssp SSHHHH-HHTTCEEEEEEECTTC----------CCCCS-----EEEEEEEEEECB-SSCTT-CC-EEECBCHHHHHTTCC
T ss_pred CChHHH-HhCccEEEEEEeCCCC----------CCCCC-----ceEEEEeeeeec-cCccc-cc-ccccCChhHhccCCC
Confidence 210000 0112344444442210 11111 111111111110 00000 00 000000000000011
Q ss_pred EEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecCCCEEEEEEecCCCCC
Q 007890 402 VRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNFNSTVDIILQNANSLS 481 (586)
Q Consensus 402 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~ 481 (586)
..+.|||+.+... . ...+.++.|++++|+|.|.+..
T Consensus 189 ~~~liNG~~~~~~-------------------~------------------------~~~l~v~~G~~vrlrliN~~~~- 224 (442)
T 2zoo_A 189 DYVVFNGSVGSTT-------------------D------------------------ENSLTAKVGETVRLYIGNGGPN- 224 (442)
T ss_dssp SEEEETTSTTTTS-------------------G------------------------GGCEEEETTCEEEEEEEEEESS-
T ss_pred CEEEECCCcCCCC-------------------C------------------------CCceEeCCCCEEEEEEEeCCCC-
Confidence 3566777643110 0 0127889999999999997542
Q ss_pred CCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEeCCceeeEEeecchhh-hhcC
Q 007890 482 NKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRADNPGAWAFHCHIESH-FYMG 560 (586)
Q Consensus 482 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H-~d~G 560 (586)
..|+||+|||.|.|++...+. ..|.+.|++.|.||+...|.|+++.||.|++|||...| ...|
T Consensus 225 ----~~~~~~i~g~~~~vi~~DG~~------------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g 288 (442)
T 2zoo_A 225 ----LVSSFHVIGEIFDTVYVEGGS------------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG 288 (442)
T ss_dssp ----CCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTS
T ss_pred ----CceeeEEcCCEEEEEecCCcc------------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccC
Confidence 279999999999999884332 12678999999999999999999999999999999999 5999
Q ss_pred ceEEEecc
Q 007890 561 MGVVFAEG 568 (586)
Q Consensus 561 M~~~~~~~ 568 (586)
|+++|.+.
T Consensus 289 ~~a~l~v~ 296 (442)
T 2zoo_A 289 ALAMLKVE 296 (442)
T ss_dssp CEEEEEEE
T ss_pred ceEEEEec
Confidence 99988653
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.74 E-value=8.9e-17 Score=165.57 Aligned_cols=88 Identities=26% Similarity=0.289 Sum_probs=71.9
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCC--cceeEEeCCCCEEEEEE
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPI--MKNTVPVHRYGWTALRF 539 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~rDTv~vpp~g~v~irf 539 (586)
+.++.|++++|+..+.+.. .+++++|||.|.|+. .|.+. +|+ +.||+.|++|+.+.+.|
T Consensus 227 l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~-----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 227 LTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA-----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT-----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc-----------CCccccceEEEECCCCcEEEEE
Confidence 8899999999866555443 566667999999985 44332 232 47999999999999999
Q ss_pred EeCCceeeEEeecchhhh-hcCceEEEecc
Q 007890 540 RADNPGAWAFHCHIESHF-YMGMGVVFAEG 568 (586)
Q Consensus 540 ~adnpG~w~~HCHil~H~-d~GM~~~~~~~ 568 (586)
++++||.|+||||.+.|. +.||+++|.+.
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~ 317 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVE 317 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEEC
Confidence 999999999999999986 99999999764
No 50
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.61 E-value=2.3e-16 Score=133.73 Aligned_cols=88 Identities=26% Similarity=0.315 Sum_probs=71.7
Q ss_pred CCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccC--CCCCCCCccccccCCCCCeEEEEEEc-CCCcceeeecc
Q 007890 69 RTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGT--PWADGTEGVTQCPILPGETFTYKFVV-DRPGTYLYHAH 145 (586)
Q Consensus 69 ~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~--~~~DGv~~~~q~~i~pG~~~~Y~f~~-~~~Gt~wYH~H 145 (586)
+|++|+|++++||+|+ ++|. ...++++||||...+.. ..+||.+ .+++.|.||++++|.|++ +++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~-~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNN-KLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEEC-SSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred EEeCCEEEEcCCCEEE--EEEC-CCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 6789999999999975 5799 77899999999875421 0123322 346789999999999999 79999999999
Q ss_pred ccccccCcceEEEEEEC
Q 007890 146 YGMQREAGLYGSIRVSL 162 (586)
Q Consensus 146 ~~~q~~~Gl~G~liV~~ 162 (586)
.+...||.|.|+|++
T Consensus 91 --~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 --PHRGAGMVGKITVEG 105 (105)
T ss_dssp --TTGGGTCEEEEEECC
T ss_pred --CchhcCCEEEEEEcC
Confidence 677899999999964
No 51
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.60 E-value=6.1e-14 Score=149.70 Aligned_cols=240 Identities=12% Similarity=0.041 Sum_probs=151.2
Q ss_pred eEEEEEEEEEEeeCCCC-----------ceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEe-cceeeccCC
Q 007890 42 IRRYKWEVKYEYKSPDC-----------FRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHW-HGIRQIGTP 109 (586)
Q Consensus 42 ~~~~~l~~~~~~~~~dg-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~-HGl~~~~~~ 109 (586)
.+++.|.+.......+| .....++|||+. .|+|++++| +++++|.|.-......+|+ ||..... -
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45677777655444333 334689999985 799999999 9999999995556788999 8864432 3
Q ss_pred CCCCCC-----ccccccCCCCCeEEEEEEcCCCcceeeeccccccccCcceEEEEEECCCCCCCCCcccccceEEEEecc
Q 007890 110 WADGTE-----GVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWF 184 (586)
Q Consensus 110 ~~DGv~-----~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~ 184 (586)
..||.+ .+.+..|.||++++..+++++.|+||++++........+.|.....+. ..+. -++-+..-.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~-----~il~~~~~~ 300 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSI---LVST-----LVLTLRPTG 300 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----------------CCC---CSCC-----EEEEEEECS
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeCCCCEEEEEecCccccccccccccccCCC---CCCc-----ceEEEEecC
Confidence 479964 245688999999999999988899999998543322211111000000 0000 000000000
Q ss_pred cCCH-HH-H---HhcccCCCCCCCCCC-------cceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcE
Q 007890 185 HRSA-FE-Q---AAGLSSIPFQWVGEP-------QSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKT 252 (586)
Q Consensus 185 ~~~~-~~-~---~~~~~~~~~~~~~~~-------~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~ 252 (586)
.... .. + +........ .... ..++|||+.+.. ..+.+.++.|++
T Consensus 301 ~~~~~~~~~p~~L~~~~~~~~--~~~~~~~~~l~~~~~iNg~~f~~----------------------~~~~~~~~~G~~ 356 (451)
T 2uxt_A 301 LLPLVTDSLPMRLLPTEIMAG--SPIRSRDISLGDDPGINGQLWDV----------------------NRIDVTAQQGTW 356 (451)
T ss_dssp CCC----CCCSCSSSSCCCCC--CCSEEEEEEECSSSSBTTBCCCT----------------------TCCCEEEETTCE
T ss_pred CCcCccccCccccCCCCCCCC--CCcceEEEEEeeEEEECCEeCCC----------------------CCCcEEcCCCCE
Confidence 0000 00 0 000000000 0000 046788887751 122578999999
Q ss_pred EEEEEeecCCcceEEEEeCCCeeEEEecCCccc---cceEEeEEEEccCceEEEEEEeCCCCCCc----eEEEEEeec
Q 007890 253 YRLRISSLTALSALSFQIEGHNMTVVEADGHNV---EPFVVQNLFIYSGETYSVLIKADQNPTRN----YWATTNIVS 323 (586)
Q Consensus 253 ~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~---~P~~~~~l~l~pGqR~dVlv~~~~~~~g~----y~l~~~~~~ 323 (586)
++|+|+|. ..|.||||||.|+|++.||.++ +|...|++.| |+++.|.+++++ +|. |.++++...
T Consensus 357 ~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn--pg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 357 ERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ--PSWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS--CCBTTBCEEEEESSHH
T ss_pred EEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC--CCCCCCceEEeCCchh
Confidence 99999997 4799999999999999999876 4788999999 999999999987 444 888887653
No 52
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.58 E-value=7e-15 Score=146.82 Aligned_cols=99 Identities=25% Similarity=0.447 Sum_probs=85.2
Q ss_pred EEECCCC--CCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC--------ccccccCCCCCeEEEEEE
Q 007890 64 ITINGRT--PGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE--------GVTQCPILPGETFTYKFV 133 (586)
Q Consensus 64 ~~~Ng~~--pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~--------~~~q~~i~pG~~~~Y~f~ 133 (586)
|+|||+. ++|.|++++||+|+|+|.|. ....+++||||..... ..+|.. ....+.|.||++++|.|.
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~-~~~~Hp~HlHG~~f~v--~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITH-GEYYHTFHMHGHRWAD--NRTGILTGPDDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEE-SSCCEEEEETTCCEES--SSSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred cccceecccCCCCEEEecCCEEEEEEecC-CCcceeEEEccceeEE--eccCccCCCcccccCCccEEeCCCceEEEEEE
Confidence 6999997 88999999999999999999 6789999999986542 134421 234578999999999999
Q ss_pred cC---CCcceeeeccccccccCcceEEEEEECCCC
Q 007890 134 VD---RPGTYLYHAHYGMQREAGLYGSIRVSLPEG 165 (586)
Q Consensus 134 ~~---~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 165 (586)
++ .+|+||||||...|...||+|.|+|.+++.
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 96 699999999999999999999999999865
No 53
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.57 E-value=9.5e-14 Score=147.93 Aligned_cols=245 Identities=13% Similarity=0.043 Sum_probs=160.7
Q ss_pred ceEEEEEEEEEEeeCC------------CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccC
Q 007890 41 RIRRYKWEVKYEYKSP------------DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGT 108 (586)
Q Consensus 41 ~~~~~~l~~~~~~~~~------------dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~ 108 (586)
..+++.|.+....... .|.....+++||+. .|.|++++| +++++|.|.-......+|++|.....
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v- 221 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL- 221 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-
Confidence 3466777665543221 13344688999996 799999999 99999999944557899999975432
Q ss_pred CCCCCCCc-----cccccCCCCCeEEEEEEcCCCcceeeecccccccc---Ccc--------------e--EEEEEECCC
Q 007890 109 PWADGTEG-----VTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE---AGL--------------Y--GSIRVSLPE 164 (586)
Q Consensus 109 ~~~DGv~~-----~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~---~Gl--------------~--G~liV~~~~ 164 (586)
-..||.+- +....|.||++++..++++++|.||++|+...... .|| . ..|.+..+.
T Consensus 222 i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 222 IAADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EEETTEEEEEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred EecCCCCCCCceEeceEEECCceeEEEEEEcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 34688762 34578999999999999988999999998321110 122 1 112222211
Q ss_pred CCCCCCcccccceEEEEecccCCHHHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceE
Q 007890 165 GESEPYAYDYDRSIILNDWFHRSAFEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYV 244 (586)
Q Consensus 165 ~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (586)
. ..+... .. ..+.+...... . ..+.... ......+.|||+.+.. ....
T Consensus 302 ~-~~~~p~--~l-~~~~~l~~~~~-~--r~~~l~~---~~~g~~~~iNg~~~~~----------------------~~~~ 349 (439)
T 2xu9_A 302 K-PLPLPK--AL-SPFPTLPAPVV-T--RRLVLTE---DMMAARFFINGQVFDH----------------------RRVD 349 (439)
T ss_dssp C-CCCCCS--CC-CCCCCCCCCSE-E--EEEEEEE---EGGGTEEEETTBCCCT----------------------TCCC
T ss_pred c-cccCcc--cC-CCcccCCCCCc-c--eEEEEEe---eccCceEeECCEECCC----------------------CCCc
Confidence 1 111100 00 00000000000 0 0000000 0011357899988750 1123
Q ss_pred EEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccc-cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 245 ITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNV-EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 245 ~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~-~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
+.++.|++++|+|.|.+.. .|.||||||.|+|++.+|... .|...|++.|.||+++.+.++++. +|.|.++++...
T Consensus 350 ~~~~~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn--pG~w~~HCHil~ 426 (439)
T 2xu9_A 350 LKGQAQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE--KGRTVFHCHIVE 426 (439)
T ss_dssp EEECTTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred eecCCCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC--CCCEEEECCcch
Confidence 7899999999999998754 799999999999999999876 588999999999999999999766 799999987643
No 54
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.52 E-value=6e-14 Score=142.61 Aligned_cols=217 Identities=16% Similarity=0.211 Sum_probs=150.9
Q ss_pred CCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCC----------
Q 007890 240 CSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQ---------- 309 (586)
Q Consensus 240 ~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~---------- 309 (586)
.+.|+|+++.|++++++|.|.... ...+|.+|..+.. +.||.+. ..-.|.||++++..+++..
T Consensus 39 ~PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~ 111 (313)
T 3tas_A 39 IPGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWR 111 (313)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred ccCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCcccccccc
Confidence 345689999999999999998754 6888999876543 5799754 1124789999999887653
Q ss_pred -CCCCceEEEEEeecCCCCC--CCCCeEEEEEecCCCCCCCCCCCCCCCCCcCCccccccccccccccCCCCCCCCCCCc
Q 007890 310 -NPTRNYWATTNIVSRNATF--TTPPGLAILNYYPNHPKRSPPTTPPSGPLWNDVGSRLNQSLAIKARKGFIIPPPQSAD 386 (586)
Q Consensus 310 -~~~g~y~l~~~~~~~~~~~--~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 386 (586)
...|+||..+......... ......+.|.+.+.. . ...|
T Consensus 112 ~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~------------------------------------~--~~~d 153 (313)
T 3tas_A 112 AGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG------------------------------------D--VLPD 153 (313)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT------------------------------------C--BCCS
T ss_pred CCCceEEEEeecCcccccchhhhhccccCceEeeccc------------------------------------c--cccc
Confidence 1347788876543221100 001122333333100 0 0124
Q ss_pred eEEEEEeeeecCCCeEEEEEcCccccCCCCchHHHhhhccccCCCCCCCCCCCCccccccccCcCCccccccceEEEecC
Q 007890 387 RMIVMLNTQNNVSGNVRWSVNKVTYTLPHIPYLIALKENITSAFDQTPPPDGYDFKNYDIFSVAENKSYTIRNGVYRLNF 466 (586)
Q Consensus 387 ~~~~~~~~~~~~~g~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (586)
+++.+... .|++|+..+.. .++ +.++.
T Consensus 154 ~e~~l~~~--------d~t~Ng~~~~~--------------------~~~-------------------------l~v~~ 180 (313)
T 3tas_A 154 RTHTIVFN--------DMTINNRPAHT--------------------GPD-------------------------FEATV 180 (313)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------CCC-------------------------EEEET
T ss_pred ccceeecc--------chhcccCCccc--------------------ccc-------------------------ccccc
Confidence 55544332 37888774321 111 78899
Q ss_pred CCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE---eCC
Q 007890 467 NSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFR---ADN 543 (586)
Q Consensus 467 g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~---adn 543 (586)
|++|+|+|.|.+.+ .||||||||.|+|+..+... .....+.++||+.|.|++...++|. ++|
T Consensus 181 Ge~vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~n 245 (313)
T 3tas_A 181 GDRVEFVMITHGEY------YHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGEGVG 245 (313)
T ss_dssp TCEEEEEEEEESSC------CEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTTTTC
T ss_pred CCEEEEEEeccccc------ceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEeccCCC
Confidence 99999999998876 89999999999998764321 1124578999999999999887776 469
Q ss_pred ceeeEEeecchhhhhcCceEEEeccc
Q 007890 544 PGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 544 pG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
||.|+|||||++|++.|||++|.|..
T Consensus 246 PG~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 246 AGAWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp SEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred CEeEEEEeCChHHHHCCCeEEEEEEC
Confidence 99999999999999999999997654
No 55
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.50 E-value=6.3e-14 Score=126.70 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=76.3
Q ss_pred CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCC------CCccc-cccCCCCC--e
Q 007890 57 DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADG------TEGVT-QCPILPGE--T 127 (586)
Q Consensus 57 dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DG------v~~~~-q~~i~pG~--~ 127 (586)
.++..+.+.++|. ++|+|+|++||+|+|+++|. .. ...|.+.+...++++.+. .++.. ...|.||+ +
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~-~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt 121 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINT-NK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGY 121 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEEC-CT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcC-CC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceE
Confidence 4455556677776 68999999999999999997 33 446777776554444321 00100 12789999 9
Q ss_pred EEEEEEcCCCcceeeeccccccccCcceEEEEEE
Q 007890 128 FTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 128 ~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
++|.|++ ++|+||||||...|..+||.|.|+|+
T Consensus 122 ~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 122 TDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999999 99999999999899999999999984
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.49 E-value=1.6e-12 Score=141.22 Aligned_cols=250 Identities=18% Similarity=0.168 Sum_probs=154.3
Q ss_pred eEEEEECCCCC---------CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc----cccccCCCCCe
Q 007890 61 KVVITINGRTP---------GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG----VTQCPILPGET 127 (586)
Q Consensus 61 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~----~~q~~i~pG~~ 127 (586)
...++|||+.. -|+|++++|+++++||.|.-......+|++|..... -..||.+- +....|.||++
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999853 189999999999999999944457789998875432 34688752 34567899999
Q ss_pred EEEEEEcCC-Ccceeeeccccc---cccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCH-----H------HHH
Q 007890 128 FTYKFVVDR-PGTYLYHAHYGM---QREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSA-----F------EQA 192 (586)
Q Consensus 128 ~~Y~f~~~~-~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~-----~------~~~ 192 (586)
++..+++++ +|+||.+++... ....|+..+++.........|.....+. ..+.+...... . ...
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSG-TALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCS-CBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcc-cccchhhcccCCcccCCCcccCCcce
Confidence 999999954 799999998431 2233454455544322111111000000 00000000000 0 000
Q ss_pred hcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCC---ccc-eeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEE
Q 007890 193 AGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSL---NVG-IICNETNPECSPYVITVIPGKTYRLRISSLTALSALSF 268 (586)
Q Consensus 193 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~ 268 (586)
..+... .........+.|||+.+..-. .+.. ..+ ..+. +.......+.++.|++++++|+| ...|.|
T Consensus 349 ~~~~l~-~~~~~~~~~~~iNg~~~~~~~---~P~l~~~~~g~~~~~--~~~~~~~~~~v~~g~~vei~l~N---~~~HP~ 419 (521)
T 1v10_A 349 INLNLR-IGRNATTADFTINGAPFIPPT---VPVLLQILSGVTNPN--DLLPGGAVISLPANQVIEISIPG---GGNHPF 419 (521)
T ss_dssp EEEECC-EECCSSSSCCEESSCCCCCCS---SCHHHHHHHTCCCGG--GSSSTTTEEEECTTCEEEEEEEC---CBSCEE
T ss_pred EEEEEE-EecCCceeEEEECCCcccCCC---CchhhhhhcCCcccc--cCCCCceEEEecCCCEEEEEEcC---CCCCCE
Confidence 000000 000011125789998874110 0000 000 0000 00012347899999999999999 347999
Q ss_pred EeCCCeeEEEecCCcc----ccceEEeEEEE-ccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 269 QIEGHNMTVVEADGHN----VEPFVVQNLFI-YSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 269 ~i~gh~~~via~DG~~----~~P~~~~~l~l-~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
|||||.|.|++.+|.. .+|...|++.| .+|+++.+.++++. +|.|.++++...
T Consensus 420 HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN--PG~W~~HCHi~~ 477 (521)
T 1v10_A 420 HLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN--PGPWFLHCHIDW 477 (521)
T ss_dssp EESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS--CEEEEEEESCHH
T ss_pred EEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC--CeeEEEeeChHH
Confidence 9999999999999875 26899999999 79999999999887 799999987654
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.49 E-value=1.1e-12 Score=141.95 Aligned_cols=271 Identities=15% Similarity=0.163 Sum_probs=162.8
Q ss_pred EEEEEEEEEeeCCCCc-----eeEEEEECCCCC--------CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCC
Q 007890 44 RYKWEVKYEYKSPDCF-----RKVVITINGRTP--------GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPW 110 (586)
Q Consensus 44 ~~~l~~~~~~~~~dg~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~ 110 (586)
++.|.+..-....++. ....++|||+.. .|+|++++|+++++||.|.-......+|++|....- -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4556665544333332 235789999853 289999999999999999944556889998875432 34
Q ss_pred CCCCC----ccccccCCCCCeEEEEEEcCC-Ccceeeecccc--cc-----ccCcceEEEEEECCCCCCCCCccc-ccce
Q 007890 111 ADGTE----GVTQCPILPGETFTYKFVVDR-PGTYLYHAHYG--MQ-----REAGLYGSIRVSLPEGESEPYAYD-YDRS 177 (586)
Q Consensus 111 ~DGv~----~~~q~~i~pG~~~~Y~f~~~~-~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~p~~~d-~e~~ 177 (586)
.||.+ .+....|.||++++..+++++ +|+||.+++.. .+ ...|+..+++.........|.... .+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 78875 124467899999999999954 79999999842 11 234454455544322111111000 000
Q ss_pred EEEEecccCCHHHH-HhcccCC-CCC--C--C--CCCcceeecCCCCCCCCCCCCCCC---ccc-eeecCCCCCCCceEE
Q 007890 178 IILNDWFHRSAFEQ-AAGLSSI-PFQ--W--V--GEPQSLLIQGKGRFNCSSLNSPSL---NVG-IICNETNPECSPYVI 245 (586)
Q Consensus 178 l~l~d~~~~~~~~~-~~~~~~~-~~~--~--~--~~~~~~liNG~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~ 245 (586)
..+.+......... ....... ... . . .....+.|||+.+..-. .+.. ..+ +.+. +.......+
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~---~P~l~~~~~g~~~~~--~~~~~~~~~ 375 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTINGTAYESPS---VPTLLQIMSGAQSAN--DLLPAGSVY 375 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEEETTEEEETTBCCCCCS---SCHHHHHHTTCCSGG--GSSSTTSEE
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEeeccCceEEECCCccCCCC---CcchhhhhcCCcccc--cCCCCceEE
Confidence 00001000000000 0000000 000 0 0 01126789998875110 0000 000 0000 001123478
Q ss_pred EEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccc----cceEEeEEEE-ccCceEEEEEEeCCCCCCceEEEEE
Q 007890 246 TVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNV----EPFVVQNLFI-YSGETYSVLIKADQNPTRNYWATTN 320 (586)
Q Consensus 246 ~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~----~P~~~~~l~l-~pGqR~dVlv~~~~~~~g~y~l~~~ 320 (586)
.++.|++++++|+|......|.||||||.|.|++.+|... +|...|++.| .+|+++.+.+++++ +|.|.++++
T Consensus 376 ~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn--PG~W~~HCH 453 (503)
T 1hfu_A 376 ELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN--PGPWFFHCH 453 (503)
T ss_dssp EECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS--CEEEEEEES
T ss_pred EccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC--CeeeeEecC
Confidence 9999999999999544455799999999999999998752 6899999999 79999999999887 799999987
Q ss_pred eec
Q 007890 321 IVS 323 (586)
Q Consensus 321 ~~~ 323 (586)
...
T Consensus 454 il~ 456 (503)
T 1hfu_A 454 IEF 456 (503)
T ss_dssp SHH
T ss_pred chh
Confidence 643
No 58
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=6e-13 Score=113.99 Aligned_cols=105 Identities=19% Similarity=0.165 Sum_probs=78.3
Q ss_pred EEEEEEEEEEee-----CCCCceeEE-EEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc
Q 007890 43 RRYKWEVKYEYK-----SPDCFRKVV-ITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG 116 (586)
Q Consensus 43 ~~~~l~~~~~~~-----~~dg~~~~~-~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~ 116 (586)
+.|.+.+.+... ..+|..... ..+|++++++.|++++||+|+++++|. ... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~-d~~-----~H~~~i~~----~~~-- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK-SPI-----SEGFSIDA----FGV-- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEEC-SSS-----CEEEEEGG----GTE--
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEEC-CCC-----eEEEEEcC----CCc--
Confidence 345555555432 234555445 488888999999999999999999999 433 67776542 232
Q ss_pred cccccCCCCCeEEEEEEcCCCcceeeeccccccccCcceEEEEEEC
Q 007890 117 VTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSL 162 (586)
Q Consensus 117 ~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 162 (586)
+..+.||++++|.|+++++|+||||||...... +|.|.|+|.+
T Consensus 70 --~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 70 --QEVIKAGETKTISFTADKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp --EEEECTTCEEEEEEECCSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred --eeEeCCCCEEEEEEECCCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 467999999999999999999999998544322 3999999974
No 59
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.40 E-value=1.9e-11 Score=130.72 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=158.8
Q ss_pred EEEEEEEEEEeeCCCCc-------------eeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCC
Q 007890 43 RRYKWEVKYEYKSPDCF-------------RKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTP 109 (586)
Q Consensus 43 ~~~~l~~~~~~~~~dg~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~ 109 (586)
++| |.+.......+|. ....+++||+. .|+|.+++|+ ++|+.|.-......+|++|..... -
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 6666555444442 23578999985 6899999998 999999955677899999986432 4
Q ss_pred CCCCCC-----ccccccCCCCCeEEEEEEcCCCcceeeeccccccc--------cCcceEEEEEECCCCCCCCCc-----
Q 007890 110 WADGTE-----GVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQR--------EAGLYGSIRVSLPEGESEPYA----- 171 (586)
Q Consensus 110 ~~DGv~-----~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~--------~~Gl~G~liV~~~~~~~~p~~----- 171 (586)
..||.. .+....|.||++++..+++.+.|+|..-++..... ......-+.+.... ...|..
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~~ 334 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIFK 334 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECSSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcCCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCCC
Confidence 578743 23457899999999999998888888877632220 01111122232211 111110
Q ss_pred ----ccccceEEEEecccCCHHHHHhcccCCCCCC--CCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEE
Q 007890 172 ----YDYDRSIILNDWFHRSAFEQAAGLSSIPFQW--VGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVI 245 (586)
Q Consensus 172 ----~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (586)
.+....+.++...... ..+...+... ......++|||+.+.. ..+.+
T Consensus 335 ~~~~~~~~r~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------------------~~~~~ 387 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQM-----HGMMGKSEGELKIALASMFLINRKSYDL----------------------KRIDL 387 (481)
T ss_dssp CCCCCCEEEEEEEEECCSTT-----TTGGGCCHHHHHHHHHTTEEETTBCCCT----------------------TCCCE
T ss_pred CCCCCCcEEEEEEeccchhc-----ccccccccccccccccceeEECCEeCCC----------------------CCceE
Confidence 0122223332211000 0000000000 0001248999998750 12358
Q ss_pred EEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEec--CCccc---cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEE
Q 007890 246 TVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEA--DGHNV---EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTN 320 (586)
Q Consensus 246 ~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~--DG~~~---~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~ 320 (586)
.++.|++++|+|+|.+. ..|.||||||.|+|++. ||... ++...|++.|.||+++.|.++++. +|.|.+.++
T Consensus 388 ~~~~G~~v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~--pG~w~~HCH 464 (481)
T 3zx1_A 388 SSKLGVVEDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF--KGLRMYHCH 464 (481)
T ss_dssp EEETTCCEEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS--CEEEEEEES
T ss_pred EeCCCCEEEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC--CeeEEEEcC
Confidence 99999999999999664 47999999999999999 99876 357899999999999999999976 799999886
Q ss_pred ee
Q 007890 321 IV 322 (586)
Q Consensus 321 ~~ 322 (586)
..
T Consensus 465 il 466 (481)
T 3zx1_A 465 IL 466 (481)
T ss_dssp SH
T ss_pred Ch
Confidence 54
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.37 E-value=3.6e-11 Score=129.38 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=153.1
Q ss_pred eEEEEECCCC---------CCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc----cccccCCCCCe
Q 007890 61 KVVITINGRT---------PGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG----VTQCPILPGET 127 (586)
Q Consensus 61 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~----~~q~~i~pG~~ 127 (586)
...++|||+- +-|.|++++|+++++||.|.-......+|++|..... -..||.+- +....|.||++
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4689999973 3478999999999999999844566788888875432 34688752 24568999999
Q ss_pred EEEEEEcCC-Ccceeeecccc---ccccCcceEEEEEECCCCCCCCCcccccce-EEEEecccCCHHHH-HhcccCCC-C
Q 007890 128 FTYKFVVDR-PGTYLYHAHYG---MQREAGLYGSIRVSLPEGESEPYAYDYDRS-IILNDWFHRSAFEQ-AAGLSSIP-F 200 (586)
Q Consensus 128 ~~Y~f~~~~-~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~-l~l~d~~~~~~~~~-~~~~~~~~-~ 200 (586)
++..+++++ .|.||.++... .....|...+++.........|........ ..+.+..+...... .......+ .
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~ 326 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGA 326 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCCC
Confidence 999999954 59999998732 122234434555443322111210000000 00001100000000 00000000 0
Q ss_pred C------CCCCCcceeecCCCCCCCCCCCCCCCcccee--ecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCC
Q 007890 201 Q------WVGEPQSLLIQGKGRFNCSSLNSPSLNVGII--CNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEG 272 (586)
Q Consensus 201 ~------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g 272 (586)
. +......+.|||+.+..-. .+....... .+..+......++.++.|++++|.|.|......|.||+||
T Consensus 327 d~~~~l~~~~~~~~w~iNg~s~~~~~---~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 327 DCNLNLSLGFACGNFVINGVSFTPPT---VPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp SEEEECCEEEETTEEEETTBCCCCCS---SCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCC---CcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0 0001235789998764110 000000000 0000001123478999999999999843334579999999
Q ss_pred CeeEEEecCCccc----cceEEeEEEEcc-CceEEEEEEeCCCCCCceEEEEEeec
Q 007890 273 HNMTVVEADGHNV----EPFVVQNLFIYS-GETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 273 h~~~via~DG~~~----~P~~~~~l~l~p-GqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
|.|.|++.+|... .|...|++.|.+ |+.+.+.++++. +|.|.++++...
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn--PG~W~~HCHi~~ 457 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN--PGPWFLHCHIDW 457 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS--CEEEEEEESCHH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC--CeeEEEEecchh
Confidence 9999999988654 689999999997 999999998887 799999987643
No 61
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.37 E-value=1.5e-12 Score=133.72 Aligned_cols=99 Identities=25% Similarity=0.451 Sum_probs=82.7
Q ss_pred EEECCCC--CCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC--------ccccccCCCCCeEEEEEE
Q 007890 64 ITINGRT--PGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE--------GVTQCPILPGETFTYKFV 133 (586)
Q Consensus 64 ~~~Ng~~--pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~--------~~~q~~i~pG~~~~Y~f~ 133 (586)
|+|||+. ..|.|++++||+|+|+|.|. ....+++|+||...... .+|.. ......|.||++++|.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~-g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITH-GEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEE-SSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcC-CccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 5899986 46899999999999999999 77899999999865321 23321 123467999999999999
Q ss_pred c---CCCcceeeeccccccccCcceEEEEEECCCC
Q 007890 134 V---DRPGTYLYHAHYGMQREAGLYGSIRVSLPEG 165 (586)
Q Consensus 134 ~---~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 165 (586)
+ +.+|+|+||||...+...||.|.|+|.+++.
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 6 7899999999999999999999999998754
No 62
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.32 E-value=4.3e-11 Score=128.78 Aligned_cols=256 Identities=14% Similarity=0.150 Sum_probs=151.3
Q ss_pred eEEEEECCCC--------CCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc----cccccCCCCCeE
Q 007890 61 KVVITINGRT--------PGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG----VTQCPILPGETF 128 (586)
Q Consensus 61 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~----~~q~~i~pG~~~ 128 (586)
...++|||+- +-|.|++++|+++++||.|.-......+|++|..... -..||.+- +....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4678999973 3478999999999999999944566889998875432 34688752 234679999999
Q ss_pred EEEEEcCC-Ccceeeecccc--c-cccCcceEEEEEECCCCCCCCCcc-cccceEEEEecccCCHHHH-HhcccCCC-CC
Q 007890 129 TYKFVVDR-PGTYLYHAHYG--M-QREAGLYGSIRVSLPEGESEPYAY-DYDRSIILNDWFHRSAFEQ-AAGLSSIP-FQ 201 (586)
Q Consensus 129 ~Y~f~~~~-~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~p~~~-d~e~~l~l~d~~~~~~~~~-~~~~~~~~-~~ 201 (586)
+..+++++ .|.||..+... . ....|..-+++.........|... ..... .+.+..+...... .......+ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCCc
Confidence 99999954 59999998731 1 122233224444432211112100 00000 0001100000000 00000000 00
Q ss_pred ------CCCCCcceeecCCCCCCCCCCCCCCCcccee--ecCCCCCCCceEEEEeCCcEEEEEEeecC--CcceEEEEeC
Q 007890 202 ------WVGEPQSLLIQGKGRFNCSSLNSPSLNVGII--CNETNPECSPYVITVIPGKTYRLRISSLT--ALSALSFQIE 271 (586)
Q Consensus 202 ------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~G~~~rlRliN~g--~~~~~~~~i~ 271 (586)
+......+.|||+.+..-. .+....... .+..+.......+.++.|++++|.|.|.+ ....|.||+|
T Consensus 324 ~~~~l~~~~~~~~w~iNg~s~~~~~---~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLH 400 (499)
T 3pxl_A 324 KAINMAFNFNGSNFFINGASFVPPT---VPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLH 400 (499)
T ss_dssp EEEECCEEECSSCEEETTBCCCCCS---SCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEET
T ss_pred EEEEEEEEecCcEEEEcCEecCCCC---CchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceec
Confidence 0001235788998764110 000000000 00000011234789999999999999432 2346999999
Q ss_pred CCeeEEEecCCccc----cceEEeEEEEcc---CceEEEEEEeCCCCCCceEEEEEeec
Q 007890 272 GHNMTVVEADGHNV----EPFVVQNLFIYS---GETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 272 gh~~~via~DG~~~----~P~~~~~l~l~p---GqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ +|.+.++++...
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn--PG~W~~HCHi~~ 457 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN--PGPWFLHCHIDF 457 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC--CceEEEEeCChh
Confidence 99999999988643 689999999986 999999999887 899989987643
No 63
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=5.2e-12 Score=136.54 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=76.0
Q ss_pred CCceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCC
Q 007890 57 DCFRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDR 136 (586)
Q Consensus 57 dg~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~ 136 (586)
++....+|++|+++|+|+|++++||+|+++++|.+....+ +||+.+.+ .|+ +..|.||++++|.|++++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 4567789999999999999999999999999998321222 47776642 232 367999999999999999
Q ss_pred Ccceeeeccc---cccccCcceEEEEEECCC
Q 007890 137 PGTYLYHAHY---GMQREAGLYGSIRVSLPE 164 (586)
Q Consensus 137 ~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 164 (586)
+|+||||||. ..+ .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 9999999992 233 3999999999763
No 64
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.31 E-value=3.1e-10 Score=123.42 Aligned_cols=253 Identities=10% Similarity=0.082 Sum_probs=149.4
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc----cccccCCCCCeEEEEEEcCC
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG----VTQCPILPGETFTYKFVVDR 136 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~----~~q~~i~pG~~~~Y~f~~~~ 136 (586)
...++|||+. .|+|+|++|+++++||.|.-......+|++|..... -..||.+- +....|.||++++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3578999985 799999999999999999955557788888875432 34688752 34568899999999999943
Q ss_pred --Ccceeeeccccccc----c--CcceEEEEEECCCCCCCCCcc-cccceEEEEecccCC----------HHHHHhcccC
Q 007890 137 --PGTYLYHAHYGMQR----E--AGLYGSIRVSLPEGESEPYAY-DYDRSIILNDWFHRS----------AFEQAAGLSS 197 (586)
Q Consensus 137 --~Gt~wYH~H~~~q~----~--~Gl~G~liV~~~~~~~~p~~~-d~e~~l~l~d~~~~~----------~~~~~~~~~~ 197 (586)
.|.||..+...... . ....+..+++-......|... ..++...+.|..... ...+......
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 57999998743211 0 012222233221111111000 000000000000000 0000000000
Q ss_pred CCCCCCCCCcceeecCCCCCCCCCCCCCCCc----cc-eeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCC
Q 007890 198 IPFQWVGEPQSLLIQGKGRFNCSSLNSPSLN----VG-IICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEG 272 (586)
Q Consensus 198 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g 272 (586)
... ......+.|||+.+..- ..+... .+ +..+...-......+.++.|++++|.|.|.+.. .|.||+||
T Consensus 325 ~~~--~~~~~~~~iNg~s~~~~---~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHG 398 (534)
T 1zpu_A 325 DNL--KNGVNYAFFNNITYTAP---KVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHG 398 (534)
T ss_dssp EEC--TTSCEEEEETTBCCCCC---SSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETT
T ss_pred ecc--CCceeEEEECCCcccCC---CCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecC
Confidence 000 01123578899876410 000000 00 000000000012368899999999999998754 79999999
Q ss_pred CeeEEEecCCc--------------------cccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 273 HNMTVVEADGH--------------------NVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 273 h~~~via~DG~--------------------~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
|.|.|++.++. ...|...|++.|.+|+.+.|.++++. +|.|.++++...
T Consensus 399 h~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN--PG~W~~HCHi~~ 467 (534)
T 1zpu_A 399 HAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN--PGVWFFHCHIEW 467 (534)
T ss_dssp CCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS--CEEEEEEECCHH
T ss_pred CceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC--CeeEEEEeCchh
Confidence 99999998853 12478899999999999999999876 799999987643
No 65
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.29 E-value=1.1e-10 Score=127.87 Aligned_cols=241 Identities=10% Similarity=0.040 Sum_probs=139.5
Q ss_pred cEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC----ccccccCCCCCeEEEEEEc-C-CCcceeeecccc
Q 007890 74 TIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE----GVTQCPILPGETFTYKFVV-D-RPGTYLYHAHYG 147 (586)
Q Consensus 74 ~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~----~~~q~~i~pG~~~~Y~f~~-~-~~Gt~wYH~H~~ 147 (586)
+|++++|+++++||.|.-......+|++|....- -..||.+ .+....|.||++++..+++ + .+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 7999999999999999944456788888875432 3468864 2345789999999999999 4 379999999853
Q ss_pred c---cccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCH--HHH-HhcccC--C---CCC------C------CC
Q 007890 148 M---QREAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSA--FEQ-AAGLSS--I---PFQ------W------VG 204 (586)
Q Consensus 148 ~---q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~--~~~-~~~~~~--~---~~~------~------~~ 204 (586)
. +... ..+.|..........|.......+ .|. +.. ... +..... . ... . ..
T Consensus 284 ~~~~~~~~-~~ail~y~~~~~~~~p~~~~p~~p----~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPP-GLTLLNYLPNSVSKLPTSPPPQTP----AWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCC-EEEEEEETTSCTTSCCSSCCCCCC----CTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCcc-EEEEEEECCCCCCCCCCCCCCCCC----ccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 2 1111 223333332221011100000000 000 000 000 000000 0 000 0 00
Q ss_pred CCcceeecCCCCCCCCCC-------CCC------CCccce-eecC-C------CCCCCceEEEEeCCcEEEEEEeecCC-
Q 007890 205 EPQSLLIQGKGRFNCSSL-------NSP------SLNVGI-ICNE-T------NPECSPYVITVIPGKTYRLRISSLTA- 262 (586)
Q Consensus 205 ~~~~~liNG~~~~~~~~~-------~~~------~~~~~~-~~~~-~------~~~~~~~~~~v~~G~~~rlRliN~g~- 262 (586)
....+.|||+.+..-..+ ... ...+.+ .|.. . ........+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 112467787765310000 000 000000 0000 0 00001135789999999999999875
Q ss_pred ----cceEEEEeCCCeeEEEecC-Ccc----------ccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 263 ----LSALSFQIEGHNMTVVEAD-GHN----------VEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 263 ----~~~~~~~i~gh~~~via~D-G~~----------~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
...|.||+|||.|.|++.. |.+ ..|...|++.|.+|+.+.+.++++. +|.|.++++...
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN--PG~W~~HCHi~~ 511 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN--PGVWAFHCHIEP 511 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS--CEEEEEEESSHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC--CeEEEEEeeehh
Confidence 3469999999999999984 553 2578999999999999999999887 799999987654
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.28 E-value=9.7e-11 Score=124.74 Aligned_cols=213 Identities=15% Similarity=0.058 Sum_probs=140.3
Q ss_pred eeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEe--cc---eeeccCCCCCCCCc-----cccccCCCCCeEE
Q 007890 60 RKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHW--HG---IRQIGTPWADGTEG-----VTQCPILPGETFT 129 (586)
Q Consensus 60 ~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~--HG---l~~~~~~~~DGv~~-----~~q~~i~pG~~~~ 129 (586)
....++|||+. .|+|++++| ++++++.|.-......+|+ +| ..... -..||.+- +....|.||++++
T Consensus 168 ~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~d 244 (448)
T 3aw5_A 168 LGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAE 244 (448)
T ss_dssp CCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEE
T ss_pred cccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEE
Confidence 34578999985 799999999 9999999995456788999 66 43221 34688752 2456789999999
Q ss_pred EEEEcCCCcceeeeccccccccCc---c----------eEE--EEEECCCCCCCCCcc----------cccceEEEEecc
Q 007890 130 YKFVVDRPGTYLYHAHYGMQREAG---L----------YGS--IRVSLPEGESEPYAY----------DYDRSIILNDWF 184 (586)
Q Consensus 130 Y~f~~~~~Gt~wYH~H~~~q~~~G---l----------~G~--liV~~~~~~~~p~~~----------d~e~~l~l~d~~ 184 (586)
..+++. .|.||..++.......+ + ... |.+.+......|... ..+..+.|+
T Consensus 245 vlv~~~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~--- 320 (448)
T 3aw5_A 245 VVVELG-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS--- 320 (448)
T ss_dssp EEEEEC-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE---
T ss_pred EEEECC-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe---
Confidence 999887 47899998732211010 1 111 122111110000000 000001110
Q ss_pred cCCHHHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEE-EeCCcEEEEEEeecCCc
Q 007890 185 HRSAFEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVIT-VIPGKTYRLRISSLTAL 263 (586)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~g~~ 263 (586)
.....+.|||+.+.. ..+.+. ++.|++++|+|.|.+..
T Consensus 321 -------------------~~~~~~~iNg~~~~~----------------------~~p~~~~~~~g~~v~~~i~N~~~~ 359 (448)
T 3aw5_A 321 -------------------LSGMQWTINGMFWNA----------------------SNPLFEHVSVEGVELWEIVNDKAS 359 (448)
T ss_dssp -------------------EETTEEEETTBCCCT----------------------TCTTCCCEEECEEEEEEEEECSSS
T ss_pred -------------------CCCceeeECCCcCCC----------------------CCCceeccCCCCeEEEEEEcCCCC
Confidence 001247899988751 112345 78899999999998844
Q ss_pred ceEEEEeCCCeeEEEecCCccc------------cc---eEEeEEEEccCceEEEEEEeC---CCCCCceEEEEEee
Q 007890 264 SALSFQIEGHNMTVVEADGHNV------------EP---FVVQNLFIYSGETYSVLIKAD---QNPTRNYWATTNIV 322 (586)
Q Consensus 264 ~~~~~~i~gh~~~via~DG~~~------------~P---~~~~~l~l~pGqR~dVlv~~~---~~~~g~y~l~~~~~ 322 (586)
..|.||||||.|+|++.+|... .| ...|++.|.||+++.+.+++. .+.+ |.++++..
T Consensus 360 ~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 360 MPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp CCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred CCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 5799999999999999999764 23 589999999999999998886 4334 77777654
No 67
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.27 E-value=1.7e-10 Score=123.39 Aligned_cols=253 Identities=15% Similarity=0.102 Sum_probs=155.4
Q ss_pred EEEEEEEEEEeeCCCC--------------ceeEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEe-cceeecc
Q 007890 43 RRYKWEVKYEYKSPDC--------------FRKVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHW-HGIRQIG 107 (586)
Q Consensus 43 ~~~~l~~~~~~~~~dg--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~-HGl~~~~ 107 (586)
.++.|.+.......+| .....+++||+. .|.+.+ +|+++++||.|.-......+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777655444333 223578999985 578776 6779999999994455678887 5653221
Q ss_pred CCCCCCCC-----ccccccCCCCCeEEEEEEcCCCcceeeecccccccc------CcceEEEEEEC---CCCCCCCC---
Q 007890 108 TPWADGTE-----GVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE------AGLYGSIRVSL---PEGESEPY--- 170 (586)
Q Consensus 108 ~~~~DGv~-----~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~---~~~~~~p~--- 170 (586)
-..||.. .+....|.|||+++..+++.+.++|+.-+....+.. ..-.-.+-|.+ ++....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~ 307 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS 307 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEECTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeCCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc
Confidence 2468853 234578999999999999988888887765221110 00001122221 01111111
Q ss_pred --c--------ccccceEEEEecccCC--HHHHHh----cccC------------CC-CCC--CC----CCcceeecCCC
Q 007890 171 --A--------YDYDRSIILNDWFHRS--AFEQAA----GLSS------------IP-FQW--VG----EPQSLLIQGKG 215 (586)
Q Consensus 171 --~--------~d~e~~l~l~d~~~~~--~~~~~~----~~~~------------~~-~~~--~~----~~~~~liNG~~ 215 (586)
. ..+++.+.+... .+. ...+.. .... .+ +.. .+ ....++|||+.
T Consensus 308 ~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 308 SLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred cCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 0 012233333210 000 000000 0000 00 000 00 01237999998
Q ss_pred CCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccccc---eEEeE
Q 007890 216 RFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNVEP---FVVQN 292 (586)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~P---~~~~~ 292 (586)
+.. ..+.++++.|+++||+|+|.+....|.||||||.|.|++.||....| ...|+
T Consensus 387 ~~~----------------------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDT 444 (488)
T 3od3_A 387 FDM----------------------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDT 444 (488)
T ss_dssp CCT----------------------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSE
T ss_pred CCC----------------------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeE
Confidence 751 12347899999999999999866679999999999999999987743 47899
Q ss_pred EEEccCceEEEEEEeCCC--CCCceEEEEEee
Q 007890 293 LFIYSGETYSVLIKADQN--PTRNYWATTNIV 322 (586)
Q Consensus 293 l~l~pGqR~dVlv~~~~~--~~g~y~l~~~~~ 322 (586)
+.|. |++..|+++++.. .+|.|.++++..
T Consensus 445 V~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 445 VKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp EEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred EEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 9999 9999999999762 247888888654
No 68
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.22 E-value=1.6e-09 Score=118.52 Aligned_cols=254 Identities=10% Similarity=0.046 Sum_probs=147.4
Q ss_pred eEEEEECCCCC--------CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC----ccccccCCCCCeE
Q 007890 61 KVVITINGRTP--------GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE----GVTQCPILPGETF 128 (586)
Q Consensus 61 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~----~~~q~~i~pG~~~ 128 (586)
...++|||+.. -|+|++++|++++++|.|.-......+|++|..... -..||.+ .+....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 378999999999999999944556789998875432 3468876 2345789999999
Q ss_pred EEEEEcC-CCcceeeeccc--ccc---ccCcc-eEEEEEECCCCCCCCCcc-----c----ccceE-EEEeccc-CC---
Q 007890 129 TYKFVVD-RPGTYLYHAHY--GMQ---REAGL-YGSIRVSLPEGESEPYAY-----D----YDRSI-ILNDWFH-RS--- 187 (586)
Q Consensus 129 ~Y~f~~~-~~Gt~wYH~H~--~~q---~~~Gl-~G~liV~~~~~~~~p~~~-----d----~e~~l-~l~d~~~-~~--- 187 (586)
+..++++ ..|.||..+.. ... ..... .+.|....... ..|... + .+..+ -+..... ..
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999995 47899998875 111 11111 23333322211 111100 0 00000 0000000 00
Q ss_pred -HHHHHhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCC----
Q 007890 188 -AFEQAAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTA---- 262 (586)
Q Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~---- 262 (586)
.......+..... ......+.|||+.+.... ..+..... ......-......+.++.++.+++.++|...
T Consensus 353 ~~~~~~~~~~~~~~--~~~~~~~~iNg~s~~~~~--~~P~L~~~-~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~ 427 (559)
T 2q9o_A 353 KRPDNTLPVALDLT--GTPLFVWKVNGSDINVDW--GKPIIDYI-LTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPF 427 (559)
T ss_dssp CCGGGEEEEEEECS--SSSSCEEEETTBCCCCCT--TSCHHHHH-HHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSC
T ss_pred cceeEEEEEEeecC--CCceEEEEECCEecccCC--CCCcHhHh-hcCCccCCCCceEEEcCCCCEEEEEEEeCCCcccc
Confidence 0000000000000 012345788998764100 00000000 0000000001236788777777776776644
Q ss_pred cceEEEEeCCCeeEEEecCC---------ccc------------cceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEe
Q 007890 263 LSALSFQIEGHNMTVVEADG---------HNV------------EPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNI 321 (586)
Q Consensus 263 ~~~~~~~i~gh~~~via~DG---------~~~------------~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~ 321 (586)
...|.||||||.|.|++.++ ... .|...|++.|.+|+++.+.++++. +|.|.++++.
T Consensus 428 ~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN--PG~W~~HCHi 505 (559)
T 2q9o_A 428 SLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN--PGAWLFHCHI 505 (559)
T ss_dssp CCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS--CEEEEEEECC
T ss_pred CCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC--CeeEEEEecc
Confidence 55799999999999999987 321 477899999999999999998876 7999999877
Q ss_pred ec
Q 007890 322 VS 323 (586)
Q Consensus 322 ~~ 323 (586)
..
T Consensus 506 l~ 507 (559)
T 2q9o_A 506 AW 507 (559)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 69
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.20 E-value=3.7e-11 Score=101.43 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=62.7
Q ss_pred CCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeeccc
Q 007890 67 NGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHY 146 (586)
Q Consensus 67 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~ 146 (586)
+..|.++.|++++||+|++ +|. .+.++++|+++. +||.....+..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~-d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INR-EAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EEC-CCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 3456689999999999655 698 677899998752 2566555556789999999988 799999999985
Q ss_pred cccccCcceEEEEEE
Q 007890 147 GMQREAGLYGSIRVS 161 (586)
Q Consensus 147 ~~q~~~Gl~G~liV~ 161 (586)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 22 899999984
No 70
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.16 E-value=2.1e-09 Score=117.86 Aligned_cols=231 Identities=15% Similarity=0.072 Sum_probs=144.4
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecce---------eeccCCCCCCCCc-----cc------cc
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGI---------RQIGTPWADGTEG-----VT------QC 120 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl---------~~~~~~~~DGv~~-----~~------q~ 120 (586)
...++|||+. .|.|.|++| ++++||.|.-......+++.|. .+. ..||.+- +. ..
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vI---a~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQI---GSDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEE---EETTEEEEEEEEECSSSSSSSE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEE---EeCCeEccCCEEecccCcccEE
Confidence 3578999995 799999999 9999999995556778888664 443 3688652 23 56
Q ss_pred cCCCCCeEEEEEEcC-CCc-ceeeeccccccc----------cCcceEEEEEECCCC-C--CCCCcc-------ccc---
Q 007890 121 PILPGETFTYKFVVD-RPG-TYLYHAHYGMQR----------EAGLYGSIRVSLPEG-E--SEPYAY-------DYD--- 175 (586)
Q Consensus 121 ~i~pG~~~~Y~f~~~-~~G-t~wYH~H~~~q~----------~~Gl~G~liV~~~~~-~--~~p~~~-------d~e--- 175 (586)
.|.|||+++.-+++. .+| +++...-..... ..+..--|.|..+.. + ..|... ..+
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 789999999999984 356 466665421111 011222355554321 1 111110 000
Q ss_pred --ceEEEEe------------cccC---CHHHHHhcccCCCC----CCCCCCcceeecCCCCCCCCCCCCCCCccceeec
Q 007890 176 --RSIILND------------WFHR---SAFEQAAGLSSIPF----QWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICN 234 (586)
Q Consensus 176 --~~l~l~d------------~~~~---~~~~~~~~~~~~~~----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~ 234 (586)
..+++.. |... ....+ .+...+. ...+....+.|||+.+.
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~----------------- 469 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFN----------------- 469 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTT-----------------
T ss_pred ceeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCC-----------------
Confidence 1122210 0000 00000 0000000 00112235789998875
Q ss_pred CCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCc------------------------cc---cc
Q 007890 235 ETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGH------------------------NV---EP 287 (586)
Q Consensus 235 ~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~------------------------~~---~P 287 (586)
....++++.|++++|+|+|.+.. .|.||||+|.|+|++.+|. ++ ++
T Consensus 470 ------~~~~~~v~~G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~ 542 (612)
T 2g23_A 470 ------DGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNEL 542 (612)
T ss_dssp ------SCCCEEEETTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSS
T ss_pred ------CCCceEecCCCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccc
Confidence 12368999999999999999744 7999999999999987532 11 23
Q ss_pred eEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 288 FVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 288 ~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
...|++.|.||+++.|.++++. .+|.|.++++...
T Consensus 543 ~~kDTv~v~Pg~~~~i~~~~~~-~pG~w~~HCHil~ 577 (612)
T 2g23_A 543 GHKDVFQVPGPQGLRVMGKFDG-AYGRFMYHCHLLE 577 (612)
T ss_dssp SCBSEEEECSSEEEEEEEECCS-CCEEEEEEESSHH
T ss_pred cccCeEEECCCcEEEEEEEeCC-CCccEEEEeCchh
Confidence 3689999999999999999994 3799999987654
No 71
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.11 E-value=3.7e-09 Score=114.85 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=140.5
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecc---------eeeccCCCCCCCC-----ccccccCCCCC
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHG---------IRQIGTPWADGTE-----GVTQCPILPGE 126 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HG---------l~~~~~~~~DGv~-----~~~q~~i~pG~ 126 (586)
...+++||+ +.|.|.++.| ++++||.|.-......++++| +.+. ..||.. .+....|.||+
T Consensus 201 gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI---a~DG~~~~~P~~~~~l~l~pge 275 (534)
T 3abg_A 201 GDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI---ASDSGLLEHPADTSLLYISMAE 275 (534)
T ss_dssp CSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE---EETTEEEEEEEEESCEEECTTC
T ss_pred CceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEE---EeCCCcccCceEeceEEECCcc
Confidence 457899998 4899999985 999999999445567888865 3443 368863 23457899999
Q ss_pred eEEEEEEcCC-Cc-ceeeeccccccccC-------cceEEEEEECCCCCCCCCcccccceEEEEecc-cCCHHHHHhccc
Q 007890 127 TFTYKFVVDR-PG-TYLYHAHYGMQREA-------GLYGSIRVSLPEGESEPYAYDYDRSIILNDWF-HRSAFEQAAGLS 196 (586)
Q Consensus 127 ~~~Y~f~~~~-~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~-~~~~~~~~~~~~ 196 (586)
+++..+++.+ +| +||..+........ ...+.+-.........+. ....+..|.... ..........+.
T Consensus 276 R~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~--~~~~P~~L~~~~~p~~~~~~~~~~~ 353 (534)
T 3abg_A 276 RYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD--TSVVPANLRDVPFPSPTTNTPRQFR 353 (534)
T ss_dssp EEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC--CCCCCCCCCCCSCCCCCCCCCEEEE
T ss_pred EEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC--CCCCccccccCCCCCCccccceEEE
Confidence 9999999854 67 68876642110000 011222222211100000 000000000000 000000000000
Q ss_pred CCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeCCCeeE
Q 007890 197 SIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIEGHNMT 276 (586)
Q Consensus 197 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~ 276 (586)
+......++|||+.+.+- ..+..+.++.|++++|.|.|.+....|.||||||.|.
T Consensus 354 -----~~~~~~~w~iNG~~f~~~--------------------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~ 408 (534)
T 3abg_A 354 -----FGRTGPTWTINGVAFADV--------------------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFK 408 (534)
T ss_dssp -----CSCCCSTTCCCCBTTBCT--------------------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEE
T ss_pred -----EeccCceeEECCcccCCC--------------------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEE
Confidence 011123578899887510 0122357899999999999988656899999999999
Q ss_pred EEec-CCc---cc---cceEEeEEEEccCceEEEEEE-eCCCCCCceEEEEEeec
Q 007890 277 VVEA-DGH---NV---EPFVVQNLFIYSGETYSVLIK-ADQNPTRNYWATTNIVS 323 (586)
Q Consensus 277 via~-DG~---~~---~P~~~~~l~l~pGqR~dVlv~-~~~~~~g~y~l~~~~~~ 323 (586)
|++. +|. .. +....|++.|.||+++.|.+. ++. +|.|.++++...
T Consensus 409 Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn--pG~w~~HCHil~ 461 (534)
T 3abg_A 409 VISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF--PGVYMFHCHNLI 461 (534)
T ss_dssp EEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC--CEEEEEEESCHH
T ss_pred EEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC--CccEEEecChHH
Confidence 9998 663 11 125689999999999999998 554 799999987654
No 72
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.08 E-value=1.4e-10 Score=97.96 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=63.8
Q ss_pred CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC----ccccccCCCCCeEEEEEEc-CCCcceeeec
Q 007890 70 TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE----GVTQCPILPGETFTYKFVV-DRPGTYLYHA 144 (586)
Q Consensus 70 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~----~~~q~~i~pG~~~~Y~f~~-~~~Gt~wYH~ 144 (586)
|-.+.|++++||+|++ +|. ...++++|.|+...+. .+|.. ..+...+.||++++|.|++ .++|+|||||
T Consensus 17 F~P~~i~v~~Gd~V~~--~n~-~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C 90 (106)
T 2gim_A 17 FEPAKLTIKPGDTVEF--LNN-KVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYC 90 (106)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEEC
T ss_pred EcCCEEEECCCCEEEE--EEC-CCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEe
Confidence 3357899999998765 588 5678888888764321 12210 0122458999999999988 8999999999
Q ss_pred cccccccCcceEEEEEEC
Q 007890 145 HYGMQREAGLYGSIRVSL 162 (586)
Q Consensus 145 H~~~q~~~Gl~G~liV~~ 162 (586)
| .|...||.|.|+|.+
T Consensus 91 ~--~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 91 E--PHRGAGMVGKITVAG 106 (106)
T ss_dssp T--TTGGGTCEEEEEECC
T ss_pred C--ChhhcCcEEEEEEcC
Confidence 9 777889999999963
No 73
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.07 E-value=2.5e-10 Score=96.29 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=64.7
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|++|+||..|... .|... +....++..|.||+...++|.+
T Consensus 21 i~v~~Gd~V~~~--N~~~~------~H~v~~~~~~~~~~---~g~~~-----------~~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 21 VTVHPGDTVKWV--NNKLP------PHNILFDDKQVPGA---SKELA-----------DKLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEECTTEEEEEE--ECSSC------CEEEEECTTSSGGG---CHHHH-----------HHHCEEEEECSTTCEEEEEECT
T ss_pred EEEcCCCEEEEE--ECCCC------CCeEEEeCCCCCcc---ccccc-----------ccccccccccCCCCeEEEEEec
Confidence 899999999874 76655 89999999876431 00000 0112578899999999999998
Q ss_pred -CCceeeEEeecchhhhhcCceEEEecc
Q 007890 542 -DNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 542 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+.||.|.|||| .|...||+..|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999998764
No 74
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.06 E-value=5.7e-10 Score=112.34 Aligned_cols=100 Identities=23% Similarity=0.382 Sum_probs=79.5
Q ss_pred EEECCCCC--CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC-------ccccccCCCCCeEEEEEEc
Q 007890 64 ITINGRTP--GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE-------GVTQCPILPGETFTYKFVV 134 (586)
Q Consensus 64 ~~~Ng~~p--gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~-------~~~q~~i~pG~~~~Y~f~~ 134 (586)
|.+||+.- -|.|+++.||+|+++|.|. ....+++|+||...... ..++.. ......|.||+++++.+.+
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~-~~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via 256 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGH-GSNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIA 256 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEE-SSCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEET
T ss_pred eeecCccccccccceecCCCEEEEEEEec-cccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEE
Confidence 46788743 3889999999999999999 78899999999765321 112211 1223568999999999876
Q ss_pred ---CCCcceeeeccccccccCcceEEEEEECCCC
Q 007890 135 ---DRPGTYLYHAHYGMQREAGLYGSIRVSLPEG 165 (586)
Q Consensus 135 ---~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 165 (586)
+.+|+|+||||...+...||.|.|.|++.+.
T Consensus 257 ~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 257 GEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 5689999999999999999999999998764
No 75
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.06 E-value=8.6e-10 Score=119.61 Aligned_cols=217 Identities=13% Similarity=0.084 Sum_probs=137.7
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecce-eeccCCCCCCCCc-----cccccCCCCCeEEEEEEc
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGI-RQIGTPWADGTEG-----VTQCPILPGETFTYKFVV 134 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl-~~~~~~~~DGv~~-----~~q~~i~pG~~~~Y~f~~ 134 (586)
...++|||+. .|.|.++.| ++++||.|.-......+|+.|. ...- -..||..- +....|.||++++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999995 789999886 9999999994445678998776 3321 34688531 345788999999999998
Q ss_pred CC-Ccceeeeccccc----cccCcc-eEEEEEECCC--C----CCCCCccc-----------ccceEEEEecccCCHHHH
Q 007890 135 DR-PGTYLYHAHYGM----QREAGL-YGSIRVSLPE--G----ESEPYAYD-----------YDRSIILNDWFHRSAFEQ 191 (586)
Q Consensus 135 ~~-~Gt~wYH~H~~~----q~~~Gl-~G~liV~~~~--~----~~~p~~~d-----------~e~~l~l~d~~~~~~~~~ 191 (586)
.+ +|. ||.-.... ....+. ...+-..... . ...|.... .+..+.|...
T Consensus 307 ~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------- 377 (513)
T 2wsd_A 307 TAYEGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------- 377 (513)
T ss_dssp GGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE--------
T ss_pred CCCCCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee--------
Confidence 54 676 33322110 000011 1222222211 0 00110000 0011111100
Q ss_pred HhcccCCCCCCCCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCCCceEEEEeCCcEEEEEEeecCCcceEEEEeC
Q 007890 192 AAGLSSIPFQWVGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPECSPYVITVIPGKTYRLRISSLTALSALSFQIE 271 (586)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~ 271 (586)
.. ......++|||+.+.+ +..+.++.|++++|+|+|.+.. .|.||||
T Consensus 378 ----~~-----~~g~~~~~iNg~~~~~-----------------------~~~~~~~~g~~~~w~l~N~~~~-~HP~HlH 424 (513)
T 2wsd_A 378 ----QD-----EYGRPVLLLNNKRWHD-----------------------PVTETPKVGTTEIWSIINPTRG-THPIHLH 424 (513)
T ss_dssp ----EC-----TTSCEEEEETTBCTTS-----------------------CCCBCCBTTCEEEEEEEECSSS-CEEEEES
T ss_pred ----cC-----CCCCceEeECCccCCC-----------------------cccEecCCCCEEEEEEEcCCCC-CcCEeEe
Confidence 00 0011246799988641 1246788999999999998754 7999999
Q ss_pred CCeeEEEecCCc---------------c------ccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 272 GHNMTVVEADGH---------------N------VEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 272 gh~~~via~DG~---------------~------~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
||.|+|++.+|. + -+|...|++.|.||+++.|+++++. .+|.|.++++...
T Consensus 425 G~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~d-npG~w~~HCHil~ 496 (513)
T 2wsd_A 425 LVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGP-YSGRYVWHCHALE 496 (513)
T ss_dssp SCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCS-CCEEEEEEESCHH
T ss_pred CceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecC-CCCCEEEEcCChh
Confidence 999999998752 1 0235799999999999999999963 4799999987654
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.02 E-value=1e-09 Score=97.52 Aligned_cols=91 Identities=16% Similarity=0.156 Sum_probs=67.7
Q ss_pred CCCCCcEEeecCCEEEEEEEeCCCCC-CeeEEecceeec------------c--CCCC-CCCCc-c-ccccCCCCCeEEE
Q 007890 69 RTPGPTIQARQNDTVIVELKNSLLTE-NVAIHWHGIRQI------------G--TPWA-DGTEG-V-TQCPILPGETFTY 130 (586)
Q Consensus 69 ~~pgP~i~v~~Gd~v~i~v~N~l~~~-~~siH~HGl~~~------------~--~~~~-DGv~~-~-~q~~i~pG~~~~Y 130 (586)
+|-.+.|++++||+|+++++|. ... +++++.|+.... + ..+. ++.+. + ....|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~-~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNN-SAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECC-CSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeC-CCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 4556789999999999999999 666 788888874210 0 0000 01010 0 1234899999999
Q ss_pred EEEcCCCcceeeeccccccccCcceEEEEEE
Q 007890 131 KFVVDRPGTYLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 131 ~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
.|+++++|+||||||...+.. ||.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999888888 999999984
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.99 E-value=1.5e-09 Score=96.53 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=69.9
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEe------eecC---CCCCCCCCCCCCCCCCCcceeEEeCCC
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLG------YGEG---KFDIYNDPKKYNLVNPIMKNTVPVHRY 532 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~n~~~p~~rDTv~vpp~ 532 (586)
+.++.|++|+|+|.|.+.+ ..|.||+|+....+.. ...+ .+.+. -....++||..|.|+
T Consensus 37 i~v~~G~~V~~~~~N~~~~-----~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 37 LTVSAGQTVTIRFKNNSAV-----QQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGN 104 (139)
T ss_dssp EEECTTCEEEEEEECCCSS-----CCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTT
T ss_pred EEECCCCEEEEEEEeCCCC-----CCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCC
Confidence 8899999999999997653 0599998886531100 0001 11110 012357899999999
Q ss_pred CEEEEEEEeCCceeeEEeecchhhhhcCceEEEec
Q 007890 533 GWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 533 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+...+.|.+++||.|.||||+..|.+ ||+..|.|
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999999999 99998865
No 78
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.94 E-value=7.9e-08 Score=104.79 Aligned_cols=251 Identities=11% Similarity=0.028 Sum_probs=144.6
Q ss_pred eEEEEECCCCC----------------CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC----ccccc
Q 007890 61 KVVITINGRTP----------------GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE----GVTQC 120 (586)
Q Consensus 61 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~----~~~q~ 120 (586)
...++|||+.. .++|++++|+++++||.|.-......+|.+|....- -..||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999732 378999999999999999944556788988876532 3468876 22456
Q ss_pred cCCCCCeEEEEEEc-CCCcceeeecccccc----ccCcceEEEEEECCCCCCCCCcccccceEEEEecccCCHHHHHhcc
Q 007890 121 PILPGETFTYKFVV-DRPGTYLYHAHYGMQ----REAGLYGSIRVSLPEGESEPYAYDYDRSIILNDWFHRSAFEQAAGL 195 (586)
Q Consensus 121 ~i~pG~~~~Y~f~~-~~~Gt~wYH~H~~~q----~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~d~~~~~~~~~~~~~ 195 (586)
.|.||++++..+++ +..|.||..+..... ...+..-+++.........|.....+. .+-..+.....+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~----~~~~~~~~~~~L~P~ 379 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTP----RGTCEDEPVASLVPH 379 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCC----CCCSCCSCGGGCCBS
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCc----cchhhcccccccccC
Confidence 78999999999999 457999999874210 111122233333221111121100000 000000000000000
Q ss_pred cCCCC--C--------C-CCCCcceeecCCCCCCCCCCCCCCCccceeecCCCCCC--CceEEEE----eCCcEEEEEEe
Q 007890 196 SSIPF--Q--------W-VGEPQSLLIQGKGRFNCSSLNSPSLNVGIICNETNPEC--SPYVITV----IPGKTYRLRIS 258 (586)
Q Consensus 196 ~~~~~--~--------~-~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v----~~G~~~rlRli 258 (586)
..... . . ......+.|||..+..- ...+... ....++... ....+.+ +.|+++.|.|-
T Consensus 380 ~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~--~~~P~L~---~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~ 454 (580)
T 3sqr_A 380 LALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLD--WSSPTTL---KIFNNETIFPTEYNVVALEQTNANEEWVVYVIE 454 (580)
T ss_dssp SCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCC--TTSCHHH---HHHTTCCCCCGGGCEEEECC----CCEEEEEEE
T ss_pred CCCCCCCccceEEEEEeccCCceeEEECCEecccC--CCCCchh---hhhcCCccCCCCcceeecccccCCCcEEEEEEe
Confidence 00000 0 0 00123456787765300 0000000 000000000 1123444 35999999999
Q ss_pred ecCC-cceEEEEeCCCeeEEEecCCc------------cccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 259 SLTA-LSALSFQIEGHNMTVVEADGH------------NVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 259 N~g~-~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
|.+. ...|.||+|||.|.||+.+.+ ...|...|++.+.+|+...+.+++++ +|.+.++++...
T Consensus 455 n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN--PG~W~~HCHi~~ 530 (580)
T 3sqr_A 455 DLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN--PGSWLLHCHIAW 530 (580)
T ss_dssp ECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS--CEEEEEEECSHH
T ss_pred CCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC--CeeeEEEECcHH
Confidence 9872 247999999999999998432 23588999999999999999999987 798889987643
No 79
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.89 E-value=4.3e-09 Score=87.79 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=63.6
Q ss_pred CCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeeccc
Q 007890 67 NGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHY 146 (586)
Q Consensus 67 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~ 146 (586)
|..|-...|++++||+|++.++|. ...++++...+.... ..+.||++.++.|+.+++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~-d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~~~~G~Y~y~C~- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNK-GKSEHTFTIKKLGID-------------VVVESGKEKNITVKPKSAGTYELICR- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEEC-SSSCEEEEEGGGTEE-------------EEECTTCEEEEEECCCSCEEEEEECT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcC-CCceEEEEEecCCcc-------------eeecCCcceeEEEecccCceEEEECc-
Confidence 334545689999999999999999 566666665544221 34789999999999999999999997
Q ss_pred cccccCcceEEEEEE
Q 007890 147 GMQREAGLYGSIRVS 161 (586)
Q Consensus 147 ~~q~~~Gl~G~liV~ 161 (586)
.+...||.|.|+|+
T Consensus 87 -~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 -YHLLKGMEGKVIVK 100 (100)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -cccCCCCEEEEEEC
Confidence 56778999999995
No 80
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.85 E-value=2.9e-09 Score=88.43 Aligned_cols=78 Identities=24% Similarity=0.313 Sum_probs=59.7
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCC----ccccccCCCCCeEEEEEEcCCCcceeeecccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTE----GVTQCPILPGETFTYKFVVDRPGTYLYHAHYG 147 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~----~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~ 147 (586)
.+.|++++||+|+ ++|. ...++++|+|+...+ +|.. ..+...+.||+++++.| .++|+|||||+
T Consensus 17 P~~i~v~~G~~V~--~~n~-~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNN-AGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKL--TAAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEe--CCCeEEEEEcC--
Confidence 4789999999876 4788 677899999986332 2211 01124689999999988 48999999999
Q ss_pred ccccCcceEEEEEE
Q 007890 148 MQREAGLYGSIRVS 161 (586)
Q Consensus 148 ~q~~~Gl~G~liV~ 161 (586)
.+...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 67778999999984
No 81
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.80 E-value=1.3e-08 Score=84.48 Aligned_cols=83 Identities=24% Similarity=0.286 Sum_probs=59.3
Q ss_pred CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccc
Q 007890 70 TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQ 149 (586)
Q Consensus 70 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q 149 (586)
|-.+.|++++||+|++ +|. ...++++|.++...++. ..++.. .....+.||+++++.| +++|+|||||+ .+
T Consensus 16 F~P~~i~v~~G~~V~~--~n~-~~~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H 86 (98)
T 1pcs_A 16 FEPSTVTIKAGEEVKW--VNN-KLSPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PH 86 (98)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSCCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GG
T ss_pred EeCCEEEECCCCEEEE--EEC-CCCCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cc
Confidence 3356899999998765 487 56788888876532100 000000 1234689999999988 78999999999 67
Q ss_pred ccCcceEEEEEE
Q 007890 150 REAGLYGSIRVS 161 (586)
Q Consensus 150 ~~~Gl~G~liV~ 161 (586)
...||.|.|+|+
T Consensus 87 ~~~gM~G~i~V~ 98 (98)
T 1pcs_A 87 RGAGMVGKVVVE 98 (98)
T ss_dssp TTTTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 788999999984
No 82
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.79 E-value=3.6e-07 Score=101.49 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=64.5
Q ss_pred EEEEeCCcEEEEEEeecCCcceEEEEeCCCeeEEEecCCccc---------------------------cceEEeEEEEc
Q 007890 244 VITVIPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHNV---------------------------EPFVVQNLFIY 296 (586)
Q Consensus 244 ~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~---------------------------~P~~~~~l~l~ 296 (586)
.+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|... ++...|++.|.
T Consensus 473 ~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~ 551 (612)
T 3gyr_A 473 GFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp CEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred ceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence 57899999999999998865 799999999999999776421 12347999999
Q ss_pred cCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 297 SGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 297 pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
+|+.+.|.+++.. .+|.|.++++...
T Consensus 552 ~~~~v~i~~rfad-npG~w~~HCHil~ 577 (612)
T 3gyr_A 552 GPQGLRVMGKFDG-AYGRFMYHCHLLE 577 (612)
T ss_dssp SSEEEEEEEECCS-CCEEEEEEESSHH
T ss_pred CCCEEEEEEEeCC-CCcceEEcCCChH
Confidence 9999999999654 4799999987754
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.79 E-value=2.2e-08 Score=88.92 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=67.7
Q ss_pred CCCCCcEEeecCCEEEEEEEe--CCCCCCeeEEeccee--ec---------c--CCCC--CCCCcc--ccccCCCCCeEE
Q 007890 69 RTPGPTIQARQNDTVIVELKN--SLLTENVAIHWHGIR--QI---------G--TPWA--DGTEGV--TQCPILPGETFT 129 (586)
Q Consensus 69 ~~pgP~i~v~~Gd~v~i~v~N--~l~~~~~siH~HGl~--~~---------~--~~~~--DGv~~~--~q~~i~pG~~~~ 129 (586)
+|-.+.|++++||+|+++++| . ...+++++.+... .. + ..+. .+...+ ....|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 344578999999999999999 6 5677888877311 00 0 0000 010100 113589999999
Q ss_pred EEEEcCCCcceeeeccccccccCcceEEEEEEC
Q 007890 130 YKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSL 162 (586)
Q Consensus 130 Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 162 (586)
+.|+++++|+|||||+...+...||.|.|+|.+
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 999999999999999988888899999999974
No 84
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.79 E-value=1e-08 Score=86.43 Aligned_cols=83 Identities=16% Similarity=0.145 Sum_probs=62.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|+||+|+..+.. . .|. + . ....+|++.+.||+...+.|.+
T Consensus 22 i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~-~--~g~-~----~------~~~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 22 LTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA-K--SAD-L----A------KSLSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEECTTCEEEEE--ECSSS------CCCBEECSSSSTT-C--CHH-H----H------HHHCBCSCCCSTTCEEEEECCT
T ss_pred EEECCCCEEEEE--ECCCC------CceEEEeCCCCcc-c--ccc-c----c------hhccccceeeCCCCEEEEEEec
Confidence 889999999886 76655 8999999865411 0 000 0 0 0011467788999999999988
Q ss_pred -CCceeeEEeecchhhhhcCceEEEecc
Q 007890 542 -DNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 542 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+.||.|.|||| .|.+.||...+.+.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999998764
No 85
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.77 E-value=1.3e-08 Score=83.08 Aligned_cols=76 Identities=32% Similarity=0.420 Sum_probs=57.8
Q ss_pred CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccc
Q 007890 70 TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQ 149 (586)
Q Consensus 70 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q 149 (586)
|-.+.|++++||+|++ +|. ...++++|.++.. ++. .....+.||+++++.| +++|+|||||+ .+
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~-~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H 79 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNN-KLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PH 79 (91)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TT
T ss_pred EeCCEEEECCCCEEEE--EEC-CCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CC
Confidence 4457899999999865 577 5678888887621 110 1224689999998887 88999999999 56
Q ss_pred ccCcceEEEEEE
Q 007890 150 REAGLYGSIRVS 161 (586)
Q Consensus 150 ~~~Gl~G~liV~ 161 (586)
...||.|.|+|+
T Consensus 80 ~~~gM~g~i~V~ 91 (91)
T 1bxv_A 80 RGAGMVGKIVVQ 91 (91)
T ss_dssp GGGTCEEEEEEC
T ss_pred ccCCCEEEEEEC
Confidence 667999999984
No 86
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.76 E-value=1e-08 Score=89.95 Aligned_cols=79 Identities=14% Similarity=0.210 Sum_probs=56.2
Q ss_pred CCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeeccc
Q 007890 67 NGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHY 146 (586)
Q Consensus 67 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~ 146 (586)
+-.|-.+.|++++||+|++ .|. ...++++++... .+|........+.||++++|.| +++|+|||+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~-d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EEC-CCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 3345567999999999865 588 556666665432 1222222334689999999988 699999999964
Q ss_pred cccccCcceEEEEEE
Q 007890 147 GMQREAGLYGSIRVS 161 (586)
Q Consensus 147 ~~q~~~Gl~G~liV~ 161 (586)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 32 999999984
No 87
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.71 E-value=2e-08 Score=83.12 Aligned_cols=78 Identities=23% Similarity=0.404 Sum_probs=57.6
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcc--ccccCCCCCeEEEEEEcCCCcceeeecccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGV--TQCPILPGETFTYKFVVDRPGTYLYHAHYGMQ 149 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~--~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q 149 (586)
.+.|++++||+| ++.|. ...+++++.++...+ +|..+. ....+.||+++++.| +++|+|+|||+ .+
T Consensus 18 P~~i~v~~G~~V--~~~n~-~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMN-KVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEEC-SSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEEC-CCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Ch
Confidence 468999999986 55687 556778777765321 121111 124589999999887 89999999999 67
Q ss_pred ccCcceEEEEEE
Q 007890 150 REAGLYGSIRVS 161 (586)
Q Consensus 150 ~~~Gl~G~liV~ 161 (586)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 778999999984
No 88
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.67 E-value=4.3e-08 Score=87.07 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=70.3
Q ss_pred EEecCCCEEEEEEec--CCCCCCCCCCCCCccccCC--CeEEE-eee-----cCCCCCCCCCCCCCCCCCCcceeEEeCC
Q 007890 462 YRLNFNSTVDIILQN--ANSLSNKTSETHPWHLHGH--DFWVL-GYG-----EGKFDIYNDPKKYNLVNPIMKNTVPVHR 531 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N--~~~~~~~~~~~HP~HlHG~--~F~Vl-~~g-----~g~~~~~~~~~~~n~~~p~~rDTv~vpp 531 (586)
+.++.|++|+|++.| .+.+ .|.||++.. .|.-+ ..+ ...+-+.. -....+++|..|.|
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~p 102 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNA 102 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCT
T ss_pred EEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCC
Confidence 899999999999999 4444 899999853 12110 000 00010000 01235789999999
Q ss_pred CCEEEEEEEeCCceeeEEeecchhhhhcCceEEEeccc
Q 007890 532 YGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 532 ~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
|....+.|.++.||.|.|||++..|...||...+.+.|
T Consensus 103 G~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 103 GESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp TEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred CceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 99999999999999999999999999999999987753
No 89
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.66 E-value=5.9e-08 Score=80.58 Aligned_cols=78 Identities=17% Similarity=0.268 Sum_probs=57.9
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc------cccccCCCCCeEEEEEEcCCCcceeeecc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG------VTQCPILPGETFTYKFVVDRPGTYLYHAH 145 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~------~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H 145 (586)
.+.|++++||+|+ ++|. ...++++|.++... .+|... .....+.||+++++.| +++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKIT--FKNN-AGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTL--TEKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEE--EEEC-SSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEE--CSCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEEC-CCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEe--CCCcEEEEEcC
Confidence 4689999999864 5788 56688888876422 122210 1123579999999988 59999999999
Q ss_pred ccccccCcceEEEEEE
Q 007890 146 YGMQREAGLYGSIRVS 161 (586)
Q Consensus 146 ~~~q~~~Gl~G~liV~ 161 (586)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 67778999999984
No 90
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.66 E-value=1.1e-07 Score=81.98 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=54.5
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
...|+|++||+|++.++|. + |+.......+-+|.. ...+.||++++|.| +++|+|||+|- .+..
T Consensus 20 P~~i~V~~GdtV~f~~~~~----~-----H~v~~~~~~~P~g~~---~f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~ 83 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK----S-----HNVEAIKEILPEGVE---SFKSKINESYTLTV--TEPGLYGVKCT--PHFG 83 (123)
T ss_dssp SSEEEECTTEEEEEEESST----T-----CCCEECTTSSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEEEECCC----C-----ceEEEcCCcCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 5689999999977776663 3 444322111123321 23467999999888 79999999998 6778
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
.||.|.|+|.++
T Consensus 84 ~GM~G~I~V~~~ 95 (123)
T 3erx_A 84 MGMVGLVQVGDA 95 (123)
T ss_dssp TTCEEEEEESSS
T ss_pred CCcEEEEEECCC
Confidence 999999999863
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.65 E-value=4.6e-08 Score=81.77 Aligned_cols=82 Identities=15% Similarity=0.130 Sum_probs=57.6
Q ss_pred CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCC-----CCCCCcc--ccccCCCCCeEEEEEEcCCCcceee
Q 007890 70 TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPW-----ADGTEGV--TQCPILPGETFTYKFVVDRPGTYLY 142 (586)
Q Consensus 70 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~-----~DGv~~~--~q~~i~pG~~~~Y~f~~~~~Gt~wY 142 (586)
|-.+.|++++||+|+ ++|. ...+++++.+.- .... ++..+++ ....+.||+++++.| +++|+|+|
T Consensus 14 F~P~~i~v~~G~tV~--~~n~-~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y 85 (102)
T 1kdj_A 14 FYPDSITVSAGEAVE--FTLV-GETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTF 85 (102)
T ss_dssp EESSEEEECTTCCEE--EEEC-SSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEE
T ss_pred EeCCEEEECCCCEEE--EEEC-CCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEE
Confidence 335789999999976 5588 566777777621 0000 0000111 223589999999988 89999999
Q ss_pred eccccccccCcceEEEEEE
Q 007890 143 HAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 143 H~H~~~q~~~Gl~G~liV~ 161 (586)
||+ .+...||.|.|+|+
T Consensus 86 ~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 86 YCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ECS--TTGGGTCEEEEEEC
T ss_pred EeC--CCcccCCeEEEEEC
Confidence 999 77788999999984
No 92
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.65 E-value=6.6e-08 Score=80.29 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=57.2
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc------cccccCCCCCeEEEEEEcCCCcceeeecc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG------VTQCPILPGETFTYKFVVDRPGTYLYHAH 145 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~------~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H 145 (586)
.+.|++++||+|+ ++|. ...+++++.++... -+|... .....+.||+++++.| .++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNN-AGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEE--CCCceEEEEcC
Confidence 5689999999765 4788 56677777775322 122210 0113579999999887 59999999999
Q ss_pred ccccccCcceEEEEEE
Q 007890 146 YGMQREAGLYGSIRVS 161 (586)
Q Consensus 146 ~~~q~~~Gl~G~liV~ 161 (586)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 67778999999984
No 93
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.62 E-value=1.1e-07 Score=82.37 Aligned_cols=77 Identities=26% Similarity=0.387 Sum_probs=53.6
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
.+.|++++||+|++.+.|. + |+........-+|.. ...+.||++++|.| +++|+|||||. .+..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~-----H~v~~~~~~~P~g~~---~f~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----G-----HNSALMKGGAPEGAE---TWKGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----S-----CCCEECTTCSCTTCC---CCBCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----C-----ceEEEccCcCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 5789999999976655443 3 444332111112221 23457999988888 79999999998 5677
Q ss_pred CcceEEEEEECCC
Q 007890 152 AGLYGSIRVSLPE 164 (586)
Q Consensus 152 ~Gl~G~liV~~~~ 164 (586)
.||.|.|+|.++.
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999998754
No 94
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.57 E-value=1.3e-07 Score=81.36 Aligned_cols=76 Identities=13% Similarity=0.184 Sum_probs=54.9
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
...|++++||+|+ ++|. . .++++..+... +-+|.. ...+.||++++|.| +.+|+|||||- .+..
T Consensus 21 P~~i~V~~GDTV~--f~n~-~-~~Hnv~~~~~~-----~p~g~~---~~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~ 84 (124)
T 3ef4_A 21 PGFVKVEAGDTVK--FVPT-D-KSHNAESVREV-----WPEGVA---PVKGGFSKEVVFNA--EKEGLYVLKCA--PHYG 84 (124)
T ss_dssp SSEEEECTTCEEE--EECS-S-SSCCCEECTTT-----SCTTSC---CCBCCTTCCEEEEC--CSSEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEEC-C-CCccEEEeCCc-----CCCCcc---ccccCCCCEEEEEe--CCCeEEEEEcC--CCCc
Confidence 5789999999965 5565 2 45666554221 112321 23467999998888 78999999996 6777
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
.||.|.|+|.++
T Consensus 85 ~GM~G~I~V~~p 96 (124)
T 3ef4_A 85 MGMVVLVQVGKP 96 (124)
T ss_dssp GTCEEEEEESSC
T ss_pred CCCEEEEEECCC
Confidence 899999999864
No 95
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.56 E-value=6.1e-08 Score=80.34 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=58.9
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCc-ceeEEeCCCCEEEEEEE
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIM-KNTVPVHRYGWTALRFR 540 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~-rDTv~vpp~g~v~irf~ 540 (586)
+.++.|++|+|+ |.+.. .|.+|+|+..+- +.. .+.+ .|+..+.||+...+.|
T Consensus 21 i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~~----------------~~~~~~~~~~~~pG~~~~~tf- 73 (98)
T 1pcs_A 21 VTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--ADT----------------AAKLSHKGLLFAAGESFTSTF- 73 (98)
T ss_dssp EEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HHH----------------HHHHCEEEEECSTTCEEEEEC-
T ss_pred EEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--ccc----------------cccccccccccCCCCEEEEEc-
Confidence 899999999987 65555 799999875321 000 0011 5788999999888877
Q ss_pred eCCceeeEEeecchhhhhcCceEEEec
Q 007890 541 ADNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 541 adnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||| .|.+.||...+.+
T Consensus 74 -~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 -TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp -CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred -CCCeEEEEEcC--CccccCCeEEEEE
Confidence 89999999999 7999999998876
No 96
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.51 E-value=2.3e-07 Score=76.80 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=59.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+| .|.+.. .|.+|+|+..+ ...++. ...++|+..+.||+...++|
T Consensus 20 i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 20 LTIKSGETVNF--VNNAGF------PHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEECTTCEEEE--EECSSC------CEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--
T ss_pred EEECCCCEEEE--EECCCC------ceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--
Confidence 88999999988 576655 89999987522 000000 01246889999999888876
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||| .|.+.||...+.+
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 58999999999 7999999998865
No 97
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.46 E-value=3.7e-07 Score=74.32 Aligned_cols=70 Identities=17% Similarity=0.265 Sum_probs=56.5
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|.+|+|+.. +...++..+.||+...+.|
T Consensus 21 i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 21 IEIQAGDTVQWV--NNKLA------PHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEECTTCEEEEE--ECSSC------CEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--
T ss_pred EEECCCCEEEEE--ECCCC------CcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--
Confidence 889999999886 65544 7999988720 0124778899999887776
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||| .|...||...+.+
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 89999999999 8999999998865
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.42 E-value=1.7e-07 Score=77.50 Aligned_cols=76 Identities=14% Similarity=0.229 Sum_probs=58.0
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|.+++++..+. .+. . ...+++..+.||+...+.|
T Consensus 21 i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~~-------~------~~~~~~~~~~~g~~~~~tf-- 72 (97)
T 1b3i_A 21 LSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ESA-------P------ALSNTKLAIAPGSFYSVTL-- 72 (97)
T ss_dssp EEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SCH-------H------HHCBCCCCCSCSCCEEEEC--
T ss_pred EEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----ccc-------c------cccccceecCCCCEEEEEe--
Confidence 899999999887 65555 799999876540 000 0 0114667788998888876
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||+ .|.++||...+.+
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 89999999999 8999999998865
No 99
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.41 E-value=9.9e-07 Score=76.62 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=60.9
Q ss_pred CCCCCcEEeecC-CEEEEEEEeCCCCCC-----eeEEe--cceee-------ccCCCCC----CCCc-c-ccccCCCCCe
Q 007890 69 RTPGPTIQARQN-DTVIVELKNSLLTEN-----VAIHW--HGIRQ-------IGTPWAD----GTEG-V-TQCPILPGET 127 (586)
Q Consensus 69 ~~pgP~i~v~~G-d~v~i~v~N~l~~~~-----~siH~--HGl~~-------~~~~~~D----Gv~~-~-~q~~i~pG~~ 127 (586)
+|-...|+|++| |+|+|+|+|. ...+ +++-+ +|... .....++ +-+. + ....|.||++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~-g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet 92 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHK-GHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEEC-SSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred eEccCeEEEcCCCeEEEEEEEEC-CCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCE
Confidence 454458999999 9999999998 5433 33222 22100 0000001 0111 0 1134799999
Q ss_pred EEEEEEcC---CCcceeeeccccccccCcceEEEEEEC
Q 007890 128 FTYKFVVD---RPGTYLYHAHYGMQREAGLYGSIRVSL 162 (586)
Q Consensus 128 ~~Y~f~~~---~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 162 (586)
.++.|+++ ++|+|||.|-...|.. ||.|.|+|.+
T Consensus 93 ~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 93 TSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 99999987 9999999998777777 8999999963
No 100
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.35 E-value=1.4e-06 Score=72.12 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=55.9
Q ss_pred CCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc----cccccCCCCCeEEEEEEcCCCcceeeecc
Q 007890 70 TPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG----VTQCPILPGETFTYKFVVDRPGTYLYHAH 145 (586)
Q Consensus 70 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~----~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H 145 (586)
|-.+.|++++||+|++ .|. ...++++....-. +-+|... .....+.||+++++.| +++|+|+|+|-
T Consensus 15 F~P~~i~v~~GdtV~~--~n~-~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNN-AGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EEC-CCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEch
Confidence 4457899999999665 587 5566666655311 1123210 0113589999999888 79999999997
Q ss_pred ccccccCcceEEEEEE
Q 007890 146 YGMQREAGLYGSIRVS 161 (586)
Q Consensus 146 ~~~q~~~Gl~G~liV~ 161 (586)
. +...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 4 6667999999984
No 101
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.32 E-value=1.4e-06 Score=75.08 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=51.4
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
.+.|++++||+|+ +.|. .. ++++..+ ....-||... ....||++++|.| +++|+|||+|. .+..
T Consensus 20 P~~i~V~~GdtV~--f~~~-~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPV-DK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEES-SS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEEC-CC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 5789999999975 4555 22 3333332 1111123211 2346999888777 78999999997 5667
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999864
No 102
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.28 E-value=1.1e-06 Score=79.38 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=60.9
Q ss_pred CCCCCcEEe-ecCCEEEEEEEeCCCCCCeeEEecceeeccCC-------------CCCCC----Cc-c-ccccCCCCCeE
Q 007890 69 RTPGPTIQA-RQNDTVIVELKNSLLTENVAIHWHGIRQIGTP-------------WADGT----EG-V-TQCPILPGETF 128 (586)
Q Consensus 69 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~-------------~~DGv----~~-~-~q~~i~pG~~~ 128 (586)
+|--..|+| +.||+|+|+|+|. ...+..---|++...... .++=+ +. + ....|.||+++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~ 132 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHT-GTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEES 132 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEEC-SCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecceEEEecCCCEEEEEEEEC-CCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEE
Confidence 454557999 9999999999999 554311011332211000 00101 10 0 11357999999
Q ss_pred EEEEEcC--CCcceeeeccccccccCcceEEEEEEC
Q 007890 129 TYKFVVD--RPGTYLYHAHYGMQREAGLYGSIRVSL 162 (586)
Q Consensus 129 ~Y~f~~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 162 (586)
++.|++. ++|+|||+|-...|.. ||.|.|+|.+
T Consensus 133 svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 133 SLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999987 8999999998777777 8999999963
No 103
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.27 E-value=1.8e-06 Score=71.51 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=58.2
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+| .|.+.. .|.+|+++..|- .+ +... .. ...+|++.+.||+...+.|
T Consensus 19 i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p-----~g-~~~~----~~----~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 19 LSIASGEKITF--KNNAGF------PHNDLFDKKEVP-----AG-VDVT----KI----SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEECTTEEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH----HH----SCCTTCCBCSTTCEEEEEE--
T ss_pred EEECCCCEEEE--EECCCC------cceEEEeCCCCc-----cc-cccc----cc----cccccceeeCCCCEEEEEe--
Confidence 88999999888 576655 899999986440 00 0000 00 0125667888999888876
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||+ .|.+.||...+.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 69999999999 7999999998865
No 104
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.27 E-value=1.7e-06 Score=74.55 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=52.0
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
.+.|++++||+|+ +.|. .. ++++..+ ....-||... ..+.||++++|.| +++|+|||+|. .+..
T Consensus 20 P~~i~V~~GdtV~--f~n~-~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPT-DK-GHNVETI-----KGMAPDGADY---VKTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEEE--EECS-SS-SCCCEEC-----TTSSCTTCCC---CBCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEEE--EEEC-CC-CcEEEEe-----cccCCCCccc---eecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 5789999999955 5666 22 3333332 1111233211 2457999988877 78999999997 4777
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1pmy_A 84 MGMVALVVVGDK 95 (123)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCEEEEEEcCC
Confidence 899999999864
No 105
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.27 E-value=2.4e-06 Score=72.47 Aligned_cols=72 Identities=11% Similarity=0.247 Sum_probs=56.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|+|++.|.+.. .|-|++... .-+..++||+...+.|.+
T Consensus 40 i~v~~G~~V~~~~~n~d~~------~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 40 LVVKKGDAVKVVVENKSPI------SEGFSIDAF----------------------------GVQEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEETTCEEEEEEEECSSS------CEEEEEGGG----------------------------TEEEEECTTCEEEEEEEC
T ss_pred EEEeCCCEEEEEEEECCCC------eEEEEEcCC----------------------------CceeEeCCCCEEEEEEEC
Confidence 8999999999999998754 455444321 125678999999999999
Q ss_pred CCceeeEEeecchhhhhcCceEEEecc
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+.||.|.||||+.-|... |...+.+.
T Consensus 86 ~~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp CSCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred CCCEEEEEECCCCCchHH-CEEEEEEe
Confidence 999999999999887554 88777653
No 106
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.25 E-value=2.8e-06 Score=70.49 Aligned_cols=70 Identities=16% Similarity=0.309 Sum_probs=57.7
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|+|++.|.+.. .|.|.+.+..+ ...+.||....+.|.+
T Consensus 30 i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKS------EHTFTIKKLGI----------------------------DVVVESGKEKNITVKP 75 (100)
T ss_dssp EEECTTSCEEEEEEECSSS------CEEEEEGGGTE----------------------------EEEECTTCEEEEEECC
T ss_pred EEECCCCEEEEEEEcCCCc------eEEEEEecCCc----------------------------ceeecCCcceeEEEec
Confidence 8999999999999998765 67766544322 2356788899999999
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|+|. .|...||...+.|
T Consensus 76 ~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 76 KSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCceEEEECc--cccCCCCEEEEEE
Confidence 99999999997 5999999988865
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.18 E-value=5.7e-06 Score=69.42 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=52.5
Q ss_pred CCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeeccccc
Q 007890 69 RTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGM 148 (586)
Q Consensus 69 ~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~ 148 (586)
.|-.+.|++++||+|++ .|. ...+++++..... .|........+.||+++++.| +++|+|+|+|-.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~-d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~-- 95 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP-- 95 (106)
T ss_dssp EESSSEEEECTTCEEEE--EEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS--
T ss_pred EEeCCEEEECCCCEEEE--EEC-CCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC--
Confidence 44457899999999765 487 4445555443211 111111223578999999888 799999999964
Q ss_pred cccCcceEEEEEE
Q 007890 149 QREAGLYGSIRVS 161 (586)
Q Consensus 149 q~~~Gl~G~liV~ 161 (586)
+. ||.|.|+|+
T Consensus 96 H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 HP--FMRGKVIVE 106 (106)
T ss_dssp CT--TCEEEEEEC
T ss_pred CC--CCEEEEEEC
Confidence 32 999999984
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.12 E-value=6.7e-06 Score=71.35 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=59.7
Q ss_pred CCCCCcEEe-ecCCEEEEEEEeCCCCCC-----eeEEe--cceee-------ccCCCCC----CCCc-c-ccccCCCCCe
Q 007890 69 RTPGPTIQA-RQNDTVIVELKNSLLTEN-----VAIHW--HGIRQ-------IGTPWAD----GTEG-V-TQCPILPGET 127 (586)
Q Consensus 69 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~~-----~siH~--HGl~~-------~~~~~~D----Gv~~-~-~q~~i~pG~~ 127 (586)
+|-...|.| ++||+|+|+|+|. ...+ +++-+ +|... .....+| +-+. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHV-GKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEEC-CCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCE
Confidence 444458999 9999999999999 5443 33332 22100 0000011 0111 1 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeeccccccccCcceEEEEEE
Q 007890 128 FTYKFVVD--RPGT-YLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 128 ~~Y~f~~~--~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
++..|++. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 93 DSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999997 7766 999998777777 899999995
No 109
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.12 E-value=3.5e-06 Score=70.09 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=56.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCc-ceeEEeCCCCEEEEEEE
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIM-KNTVPVHRYGWTALRFR 540 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~-rDTv~vpp~g~v~irf~ 540 (586)
+.++.|++|+|+ |.+.. .|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.|
T Consensus 19 i~v~~G~tV~~~--n~~~~------~H~~~~~~~~~~-----~~~~~~~---~----~~~~~~~~~~~~~pG~~~~~tf- 77 (102)
T 1kdj_A 19 ITVSAGEAVEFT--LVGET------GHNIVFDIPAGA-----PGTVASE---L----KAASMDENDLLSEDEPSFKAKV- 77 (102)
T ss_dssp EEECTTCCEEEE--ECSSS------CBCCEECCCTTC-----CHHHHHH---H----HHTSCCTTCCBBTTBCEEEECC-
T ss_pred EEECCCCEEEEE--ECCCC------CeEEEEeCcccc-----cccccch---h----hcccccccceecCCCCEEEEEe-
Confidence 899999999986 76655 799998731100 0000000 0 00122 3667788998888877
Q ss_pred eCCceeeEEeecchhhhhcCceEEEec
Q 007890 541 ADNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 541 adnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||+ .|.+.||...+.|
T Consensus 78 -~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 -STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp -CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred -CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999998865
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.10 E-value=1.4e-05 Score=84.78 Aligned_cols=88 Identities=22% Similarity=0.315 Sum_probs=63.0
Q ss_pred EEEECCCCCCCcEEeecCCEEEEEEEeCCC--CCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcce
Q 007890 63 VITINGRTPGPTIQARQNDTVIVELKNSLL--TENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTY 140 (586)
Q Consensus 63 ~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~--~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~ 140 (586)
+...+-.|-.+.|+|++||+|++.++|... +.. ||...+. -|+ ...+.||++.++.|+++++|+|
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi-----HSF~IPs----lGI----K~DaiPGrtnsvtFtadkPGvY 614 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS-----HGFVVVN----HGV----SMEISPQQTSSITFVADKPGLH 614 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC-----EEEEETT----TTE----EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCce-----eeeEecC----CCc----eeeeCCCCeEEEEEEcCCCEEE
Confidence 334444566679999999999999999621 233 4443321 111 2358999999999999999999
Q ss_pred eeeccc-cccccCcceEEEEEECC
Q 007890 141 LYHAHY-GMQREAGLYGSIRVSLP 163 (586)
Q Consensus 141 wYH~H~-~~q~~~Gl~G~liV~~~ 163 (586)
||+|.. -...-.+|.|.|+|+++
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 999983 22223679999999864
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.09 E-value=9.5e-06 Score=70.23 Aligned_cols=91 Identities=18% Similarity=0.192 Sum_probs=60.7
Q ss_pred CCCCCcEEe-ecCCEEEEEEEeCCCCCC-----eeEEecce--e-------eccCCCCC----CCCc-c-ccccCCCCCe
Q 007890 69 RTPGPTIQA-RQNDTVIVELKNSLLTEN-----VAIHWHGI--R-------QIGTPWAD----GTEG-V-TQCPILPGET 127 (586)
Q Consensus 69 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~~-----~siH~HGl--~-------~~~~~~~D----Gv~~-~-~q~~i~pG~~ 127 (586)
+|-...|.| +.|++|+|+|+|. ...+ +++-+=.. . ......+| +-+. + ....|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHT-GKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 454567999 9999999999999 5544 44332210 0 00000011 0111 1 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeeccccccccCcceEEEEEE
Q 007890 128 FTYKFVVD--RPGT-YLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 128 ~~Y~f~~~--~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
+++.|++. ++|+ |+|.|-...|.. ||.|.|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999997 8995 999998777777 899999995
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.06 E-value=1.8e-05 Score=68.45 Aligned_cols=91 Identities=16% Similarity=0.093 Sum_probs=60.2
Q ss_pred CCCCCcEEe-ecCCEEEEEEEeCCCCCC-----eeEEe--cceee-------ccCCCCCCC----Cc-c-ccccCCCCCe
Q 007890 69 RTPGPTIQA-RQNDTVIVELKNSLLTEN-----VAIHW--HGIRQ-------IGTPWADGT----EG-V-TQCPILPGET 127 (586)
Q Consensus 69 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~~-----~siH~--HGl~~-------~~~~~~DGv----~~-~-~q~~i~pG~~ 127 (586)
+|-...|.| ++||+|+|+|+|. ...+ +++-. .|... .....++=+ +. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHS-GSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 454567999 9999999999999 5543 44333 21100 000001100 10 1 0124899999
Q ss_pred EEEEEEcC--CCcc-eeeeccccccccCcceEEEEEE
Q 007890 128 FTYKFVVD--RPGT-YLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 128 ~~Y~f~~~--~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
+++.|++. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999996 7887 999998777777 899999983
No 113
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.95 E-value=1e-05 Score=66.89 Aligned_cols=80 Identities=14% Similarity=0.194 Sum_probs=56.7
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+| .|.+.. .|.++++...+- . + .+. .. ....++.+.+.||+...+.|
T Consensus 19 i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p---~--~-~~~------~~--~~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 19 FSISPGEKIVF--KNNAGF------PHNIVFDEDSIP---S--G-VDA------SK--ISMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEECTTCEEEE--EECSSC------CBCCEECTTSSC---T--T-CCH------HH--HCCCTTCCBCSTTCEEEEEC--
T ss_pred EEECCCCEEEE--EECCCC------ceEEEEeCCCCc---c--c-ccc------cc--cccccCccccCCCCEEEEEE--
Confidence 89999999988 576655 799998875330 0 0 000 00 00123456788998887766
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||+ .|..+||...+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 69999999999 7999999998865
No 114
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.85 E-value=3.6e-05 Score=66.10 Aligned_cols=74 Identities=18% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecccccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHYGMQRE 151 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~~~q~~ 151 (586)
.+.|++++||+|++ .|. .. .++++... ...-+|.. ...+.||++++|.| +++|+|||+|-. +..
T Consensus 20 P~~i~V~~GdtV~f--~n~-d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF--~~~G~y~y~C~~--H~~ 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPT-DK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF--TAPGVYGVKCTP--HPF 83 (122)
T ss_dssp SSEEEECTTEEEEE--EES-SS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEEETT--EEE
T ss_pred CCEEEECCCCEEEE--EEC-CC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe--CCCEEEEEEeCC--Ccc
Confidence 56899999998654 566 22 44443332 11112221 12457999999888 789999999974 333
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
|.|.|+|.+.
T Consensus 84 --M~G~I~V~~~ 93 (122)
T 2ux6_A 84 --MVGVVQVGDA 93 (122)
T ss_dssp --EEEEEEESSS
T ss_pred --CEEEEEEeCC
Confidence 9999999864
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.81 E-value=4.1e-05 Score=68.70 Aligned_cols=82 Identities=17% Similarity=0.349 Sum_probs=58.4
Q ss_pred EEEecCCCEEEEEEecCC-CCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCccee-------EEeCCC
Q 007890 461 VYRLNFNSTVDIILQNAN-SLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNT-------VPVHRY 532 (586)
Q Consensus 461 ~~~~~~g~~ve~~l~N~~-~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDT-------v~vpp~ 532 (586)
.+.++.|+.|.+++.|.+ .+ .|-|-++.. +. .+.. .|...+. ..|.||
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG 117 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDG 117 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTT
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeec-------Cc-chhc----------cccccccccccccccccCCC
Confidence 389999999999999974 33 566655522 11 0100 0001111 156788
Q ss_pred C--EEEEEEEeCCceeeEEeecchhhhhcCceEEEec
Q 007890 533 G--WTALRFRADNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 533 g--~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+ ...++|++ .||.|.||||+.-|...||-..+.+
T Consensus 118 ~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 118 KFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp BEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred CceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 8 88999999 9999999999999999999988765
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.76 E-value=6.3e-05 Score=62.83 Aligned_cols=70 Identities=20% Similarity=0.289 Sum_probs=49.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|+|+ |.+.. .|.+|+|... .|. . .+ ++-.+.||+...+.|
T Consensus 35 i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~-------~-------~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 35 LHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGE-------A-------AL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS-------S-------CE-ECCCBCTTEEEEEEE--
T ss_pred EEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCc-------c-------cc-cccccCCCCEEEEEe--
Confidence 899999999885 76655 7999987521 110 0 01 122367888766666
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||++ |. ||...+.+
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999998 65 89888765
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.66 E-value=0.00011 Score=79.67 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=61.0
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE
Q 007890 461 VYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFR 540 (586)
Q Consensus 461 ~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~ 540 (586)
.+.++.|+.|+|.+.|.+.. ....|.|+++++.+. ..+.||....++|.
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Ft 562 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFV 562 (595)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEE
T ss_pred EEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEE
Confidence 38999999999999996431 112688888775432 35788999999999
Q ss_pred eCCceeeEEeec---chhhhhcCceEEEecccc
Q 007890 541 ADNPGAWAFHCH---IESHFYMGMGVVFAEGIE 570 (586)
Q Consensus 541 adnpG~w~~HCH---il~H~d~GM~~~~~~~~~ 570 (586)
++.||.|.|||| ...|. ||...+.+.+.
T Consensus 563 a~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 563 AANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CCSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 999999999999 45786 99999987653
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.38 E-value=0.00049 Score=58.59 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCCCCcEEeec-CCEEEEEEEeCCCCCC-----eeEEec-----------ceeeccCCCCCCCC----cc--ccccCCCC
Q 007890 69 RTPGPTIQARQ-NDTVIVELKNSLLTEN-----VAIHWH-----------GIRQIGTPWADGTE----GV--TQCPILPG 125 (586)
Q Consensus 69 ~~pgP~i~v~~-Gd~v~i~v~N~l~~~~-----~siH~H-----------Gl~~~~~~~~DGv~----~~--~q~~i~pG 125 (586)
+|-...|.|+. |++|+|+|+|. ...+ +++-.= |+.. + +.+|=++ .+ ....|.||
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~-G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~-~-~~~~y~~~~d~~via~t~~l~pG 90 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHP-GNLPKNVMGHNWVLSTAADMQGVVTDGMAS-G-LDKDYLKPDDSRVIAHTKLIGSG 90 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECC-SSCCHHHHCBCCEEEEHHHHHHHHHHHHHH-C-GGGTTSCTTCTTCCEECCCBCTT
T ss_pred EEecCEEEEecCCCEEEEEEEEC-CcccccccCceEEEcccchHHHHHHHHHhc-C-hhhccCCCCCccceeccceeCCC
Confidence 45567899986 99999999999 6543 333221 1110 0 1111121 11 11247999
Q ss_pred CeEEEEEEcC---CCcceeeeccccccccCcceEEEEEE
Q 007890 126 ETFTYKFVVD---RPGTYLYHAHYGMQREAGLYGSIRVS 161 (586)
Q Consensus 126 ~~~~Y~f~~~---~~Gt~wYH~H~~~q~~~Gl~G~liV~ 161 (586)
++++..|+.. ++|+|.|.|. .+. ||.|.|+|.
T Consensus 91 es~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 91 EKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999999996 8999999999 665 899999983
No 119
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.07 E-value=0.0017 Score=53.13 Aligned_cols=78 Identities=12% Similarity=0.211 Sum_probs=53.0
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|-+.++.. .++. ..+. ...-.+...+.||+...+.|
T Consensus 20 i~v~~GdtV~~~--n~~~~------~H~v~~~~~----------~~p~-----g~~~-~~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 20 ISVAAGEAIEFV--NNAGF------PHNIVFDED----------AVPA-----GVDA-DAISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEECTTCEEEEE--ECSSC------CEEEEECTT----------SSCT-----TCCH-HHHCEEEEECSTTCEEEEEC--
T ss_pred EEECCCCEEEEE--ECCCC------CEEEEEeCC----------CCcc-----cccc-ccccccccccCCCCEEEEEc--
Confidence 899999999986 65544 676655431 1110 0000 00113446788998887776
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|+|-+ |..+||...+.+
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 899999999986 999999988865
No 120
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.01 E-value=0.0036 Score=54.46 Aligned_cols=75 Identities=23% Similarity=0.428 Sum_probs=54.4
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeeccc-ccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAHY-GMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H~-~~q~~ 151 (586)
..|+++.|++|++.++|. +. .|+...+. .|. ...+.||+..++.|+++++|+|+|+|.- -...-
T Consensus 60 ~~l~Vp~G~~V~~~vts~--DV-----~Hsf~ip~----~~~----k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP--DV-----IHGFHVEG----TNI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS--SS-----CEEEEETT----SSC----EEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeC--Cc-----cceEEecC----CCc----eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 489999999999999997 33 34444431 121 1346899999999999999999999962 11112
Q ss_pred CcceEEEEEEC
Q 007890 152 AGLYGSIRVSL 162 (586)
Q Consensus 152 ~Gl~G~liV~~ 162 (586)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 58999999863
No 121
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.93 E-value=0.0023 Score=53.22 Aligned_cols=70 Identities=16% Similarity=0.159 Sum_probs=48.6
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|+|+ |.+.. .|.+++....- +. ...++-.+.+|+...+.|
T Consensus 36 i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-------~~---------------~~~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 36 VTIKAGETVYWV--NGEVM------PHNVAFKKGIV-------GE---------------DAFRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEECTTCEEEEE--ECSSS------CBCCEECTTTS-------SS---------------SCEECCCBCTTEEEEEEE--
T ss_pred EEECCCCEEEEE--ECCCC------cEEEEEeCCCC-------Cc---------------ccccccccCCCCEEEEEe--
Confidence 899999999987 66554 67766543210 00 011233467888777766
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|+|-+ |. ||...+.+
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999987 86 99888765
No 122
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.91 E-value=0.0019 Score=55.26 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=50.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
++++.|++|+|+..+ . .|-+..+.. .++.. .+.+.+.+|....+.|
T Consensus 24 i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF-- 69 (124)
T 3ef4_A 24 VKVEAGDTVKFVPTD---K------SHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA-- 69 (124)
T ss_dssp EEECTTCEEEEECSS---S------SCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--
T ss_pred EEECCCCEEEEEECC---C------CccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--
Confidence 899999999998554 3 677665421 11100 0122345777766666
Q ss_pred CCceeeEEeecchhhhhcCceEEEeccc
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+.||.|.|||- .|..+||...+.|+.
T Consensus 70 ~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 70 EKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 89999999995 899999999997763
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.84 E-value=0.0031 Score=53.96 Aligned_cols=71 Identities=17% Similarity=0.235 Sum_probs=49.9
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
++++.|++|+|++.| . .|-+..+.. .++.. . +.+.+.|++...+.|
T Consensus 23 i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P~g--~-----------~~f~~~pg~t~s~TF-- 68 (123)
T 3erx_A 23 VRAEPGDVINFVPTD---K------SHNVEAIKE----------ILPEG--V-----------ESFKSKINESYTLTV-- 68 (123)
T ss_dssp EEECTTEEEEEEESS---T------TCCCEECTT----------SSCTT--C-----------CCCBCCTTCCEEEEE--
T ss_pred EEECCCCEEEEEECC---C------CceEEEcCC----------cCCCC--c-----------cceecCCCCEEEEEe--
Confidence 899999999999876 2 466554421 11100 0 011235677666666
Q ss_pred CCceeeEEeecchhhhhcCceEEEecc
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+.||.|.|+|- .|...||...+.|+
T Consensus 69 ~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 69 TEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 89999999999 89999999999776
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.77 E-value=0.0034 Score=54.48 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=49.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|+ |.+.. .|-+++.... .|. ..-++-.+.||+...+.|
T Consensus 62 i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~---------------~~~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 62 VTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--
T ss_pred EEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEc--
Confidence 899999999987 76654 6877764321 000 011233567888777776
Q ss_pred CCceeeEEeecchhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
+.||.|.|||-+ |. ||...+.+
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999987 87 99988865
No 125
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.76 E-value=0.0024 Score=54.89 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=48.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|+|++.|. .|-+..+.. ..+.. ...+.+.||+...+.|
T Consensus 25 i~V~~GDtVtf~n~~~---------~H~v~~~~~----------~~P~g-------------~~~f~s~pGet~s~TF-- 70 (127)
T 3tu6_A 25 IRAQPGDTVTFVAKDK---------GHNSALMKG----------GAPEG-------------AETWKGKINEEITVTL-- 70 (127)
T ss_dssp EEECTTCEEEEECSSS---------SCCCEECTT----------CSCTT-------------CCCCBCCTTCCCEEEC--
T ss_pred EEECCCCEEEEEECCC---------CceEEEccC----------cCCCC-------------ccceecCCCCEEEEEe--
Confidence 8999999999987652 355544321 01100 0111224677655555
Q ss_pred CCceeeEEeecchhhhhcCceEEEeccc
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+.||.|.|||- .|...||...+.|+.
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999997754
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.74 E-value=0.0074 Score=54.33 Aligned_cols=76 Identities=25% Similarity=0.463 Sum_probs=57.0
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-ccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQR 150 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~ 150 (586)
...|+++.|++|++.++|. +.- |+...+.. |+ +.-+.||+..+..|.++++|+|++.|. .-...
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~--DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~ 156 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSP--DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 156 (168)
T ss_dssp SSSEEEETTSEEEEEEECS--SSC-----EEEEETTS----SC----EEEECTTBCEEEEEECCSCEEEEEECCSCCSTT
T ss_pred cCEEEEeCCCeEEEEEecC--Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEeCCCEEEEEECCcCCCCC
Confidence 4579999999999999997 433 44443311 11 234679999999999999999999998 34444
Q ss_pred cCcceEEEEEEC
Q 007890 151 EAGLYGSIRVSL 162 (586)
Q Consensus 151 ~~Gl~G~liV~~ 162 (586)
-.+|.|-++|++
T Consensus 157 Hs~M~g~V~V~e 168 (168)
T 3s8f_B 157 HQNMFGTIVVKE 168 (168)
T ss_dssp GGGCEEEEEEEC
T ss_pred cCCCEEEEEEeC
Confidence 578999999973
No 127
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.83 E-value=0.015 Score=49.66 Aligned_cols=37 Identities=27% Similarity=0.554 Sum_probs=29.8
Q ss_pred eCCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEeccc
Q 007890 529 VHRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 529 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+.+|....+.| +.||.|.|+|- .|...||...+.+.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 35777655555 89999999998 599999999997764
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.71 E-value=0.031 Score=47.66 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=29.0
Q ss_pred CCCCEEEEEEEeCCceeeEEeecchhhhhcCceEEEeccc
Q 007890 530 HRYGWTALRFRADNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 530 pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
.+|....+.| +.||.|.|+|- .|...||...+.+.+
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677655554 89999999997 599999999997754
No 129
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.48 E-value=0.059 Score=46.69 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=50.5
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|+|++.|.+. .|. |+|-+.+ . -+.+.||....+.|.+
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~------------------~---k~d~~PG~~~~~~~~~ 106 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN------------------I---NVEVLPGEVSTVRYTF 106 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS------------------C---EEEECBTBCEEEEEEC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC------------------c---eeEeCCCCcEEEEEEc
Confidence 899999999999998652 344 4331110 1 1345677778899999
Q ss_pred CCceeeEEeecc---hhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHI---ESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHi---l~H~d~GM~~~~~~ 567 (586)
+.||.|.++|.. ..| .+|-..+.+
T Consensus 107 ~~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 107 KRPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp CSCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 999999999987 677 478777655
No 130
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.28 E-value=0.049 Score=58.02 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=58.2
Q ss_pred EEEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE
Q 007890 461 VYRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFR 540 (586)
Q Consensus 461 ~~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~ 540 (586)
.+.++.|+.|+|++.|.+.. ....|.|.+.+.... +.+.||....+.|.
T Consensus 559 eI~VP~GdtVrfiLTN~D~v---eDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQI---EDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFV 607 (638)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEE
T ss_pred EEEEecCceeEEEEecCCcC---CCceeeeEecCCCce----------------------------eeeCCCCeEEEEEE
Confidence 48899999999999997421 012677766554321 25678889999999
Q ss_pred eCCceeeEEeecchhhhh-cCceEEEeccc
Q 007890 541 ADNPGAWAFHCHIESHFY-MGMGVVFAEGI 569 (586)
Q Consensus 541 adnpG~w~~HCHil~H~d-~GM~~~~~~~~ 569 (586)
++.||.|.+||...-|.. .+|...+.|.|
T Consensus 608 adkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 608 ADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred cCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999999765543 57888887754
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.69 E-value=0.066 Score=48.07 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=60.9
Q ss_pred EEe-cCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCC------CCCCCCC-CC-CCCCcceeEEeCCC
Q 007890 462 YRL-NFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDI------YNDPKKY-NL-VNPIMKNTVPVHRY 532 (586)
Q Consensus 462 ~~~-~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~------~~~~~~~-n~-~~p~~rDTv~vpp~ 532 (586)
+.+ +.|+.|.|+|.|.+.. . -=-=+|.|-+...+. +.. ......+ .. +...+..+..|.||
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------P--KASMGHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------C--HHHHCBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------c--cccccceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 899 9999999999998743 1 000024443333211 000 0000000 00 01134456678999
Q ss_pred CEEEEEEEeC--CceeeEEeecchhhhhcCceEEEecc
Q 007890 533 GWTALRFRAD--NPGAWAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 533 g~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~~~ 568 (586)
+...|.|.++ .||.|-|+|-+--|.. ||-..|.+.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999987 8999999999999988 899888663
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.40 E-value=0.15 Score=43.63 Aligned_cols=95 Identities=12% Similarity=0.178 Sum_probs=60.9
Q ss_pred EEecCC-CEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCC-----CCCCCCCC----CCCCcceeEEeCC
Q 007890 462 YRLNFN-STVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIY-----NDPKKYNL----VNPIMKNTVPVHR 531 (586)
Q Consensus 462 ~~~~~g-~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~----~~p~~rDTv~vpp 531 (586)
++++.| +.|.+++.|.+.. . ---=+|.|-+...+. .... ......++ ..-....+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~--~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------P--KTGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------C--HHHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------c--ccccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 899999 9999999998753 1 000134454443221 0000 00000000 0112345667899
Q ss_pred CCEEEEEEEeC---CceeeEEeecchhhhhcCceEEEec
Q 007890 532 YGWTALRFRAD---NPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 532 ~g~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
|+...+.|.++ .||.|-|.|-+--|.. ||-..+.+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V 127 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEE
Confidence 99999999987 9999999999989988 89888765
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=93.77 E-value=0.14 Score=43.41 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=44.8
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|++|.|+.. +. .|-++++. +.++.. . ..+.+.+|+...+.|
T Consensus 23 i~V~~GdtV~f~n~--d~-------~H~v~~~~----------~~~p~~--~-----------~~~~~~~g~t~~~tF-- 68 (122)
T 2ux6_A 23 LKVAPGDTVTFIPT--DK-------GHNVETIK----------GMIPDG--A-----------EAFKSKINENYKVTF-- 68 (122)
T ss_dssp EEECTTEEEEEEES--SS-------SCCCEECT----------TCSCTT--C-----------CCCBCCTTCCEEEEE--
T ss_pred EEECCCCEEEEEEC--CC-------CcEEEEcc----------cccCCC--c-----------ceeecCCCCEEEEEe--
Confidence 89999999998743 21 36665543 111100 0 011235677666666
Q ss_pred CCceeeEEeecchhhhhcCceEEEeccc
Q 007890 542 DNPGAWAFHCHIESHFYMGMGVVFAEGI 569 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 569 (586)
+.||.|.|+|-+ |.. |...+.|.+
T Consensus 69 ~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 69 TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 899999999987 877 888886653
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=93.43 E-value=0.29 Score=41.84 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=59.7
Q ss_pred EEe-cCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCC------CCCCCCCCCCCCCC-CCcceeEEeCCCC
Q 007890 462 YRL-NFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGK------FDIYNDPKKYNLVN-PIMKNTVPVHRYG 533 (586)
Q Consensus 462 ~~~-~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~------~~~~~~~~~~n~~~-p~~rDTv~vpp~g 533 (586)
+.+ +.|+.|.+++.|.+.. + ---=+|.|-+...+... .....+.....-.+ .....|..|.||+
T Consensus 19 i~V~k~G~~vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 90 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKL------P--KAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGE 90 (128)
T ss_dssp EEECTTCSEEEEEEEECSCS------C--HHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCcEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCC
Confidence 888 8899999999998753 2 01112344333211000 00000000000001 1234566789999
Q ss_pred EEEEEEEeC--Ccee-eEEeecchhhhhcCceEEEecc
Q 007890 534 WTALRFRAD--NPGA-WAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 534 ~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 568 (586)
...+.|.+. .+|. |-|.|-+--|.. ||-..+.+.
T Consensus 91 s~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 91 TDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999988 8994 999999999988 899888653
No 135
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.02 E-value=0.52 Score=39.88 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=59.6
Q ss_pred EEecC-CCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCC-C-CC--CCC-CCC-CC-CCCCCcceeEEeCCCC
Q 007890 462 YRLNF-NSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGK-F-DI--YND-PKK-YN-LVNPIMKNTVPVHRYG 533 (586)
Q Consensus 462 ~~~~~-g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~-~-~~--~~~-~~~-~n-~~~p~~rDTv~vpp~g 533 (586)
+.++. |+.|+++|.|.+.+ |--.=||.|-+...+.-. . .. ... ... +. -+....-.|..|.||+
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~--------p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL--------PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC--------CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCcc--------cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCc
Confidence 88876 99999999998753 222235666554321100 0 00 000 001 11 1223566788899999
Q ss_pred EEEEEEEeC---CceeeEEeecchhhhhcCceEEEec
Q 007890 534 WTALRFRAD---NPGAWAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 534 ~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~ 567 (586)
...|-|.+. .+|.|-|-|- -|. ||-..+.+
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999987 8999999999 898 99888765
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.47 E-value=0.55 Score=42.06 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=52.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.+.|.+- .|.|.+=.... . +.+.||..-.+.|.+
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf~IP~lgi-------------------------k---~da~PG~~n~~~~~~ 139 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGFHVEGTNI-------------------------N---VEVLPGEVSTVRYTF 139 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEEEETTSSC-------------------------E---EEECTTBCEEEEEEC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEEEECCCCe-------------------------E---EEecCCceeEEEEEe
Confidence 889999999999999754 46554422211 1 234577778899999
Q ss_pred CCceeeEEeecc-hhhhhcCceEEEec
Q 007890 542 DNPGAWAFHCHI-ESHFYMGMGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHi-l~H~d~GM~~~~~~ 567 (586)
+.||.|.+.|.. .-+...+|...+.+
T Consensus 140 ~kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 140 KRPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp CSCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 999999999995 45556778877755
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.43 E-value=0.6 Score=39.85 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=59.1
Q ss_pred EEe-cCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecC------CCCCCCCCCCCCCCC-CCcceeEEeCCCC
Q 007890 462 YRL-NFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEG------KFDIYNDPKKYNLVN-PIMKNTVPVHRYG 533 (586)
Q Consensus 462 ~~~-~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~~n~~~-p~~rDTv~vpp~g 533 (586)
+.+ +.|+.|.+++.|.+.. + -=-=+|.|-+...+.. ............-.+ .....|-.|.||+
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 889 8999999999998743 1 0111234433322100 000000000000001 1234555799999
Q ss_pred EEEEEEEeC--Ccee-eEEeecchhhhhcCceEEEec
Q 007890 534 WTALRFRAD--NPGA-WAFHCHIESHFYMGMGVVFAE 567 (586)
Q Consensus 534 ~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~ 567 (586)
...+.|.+. .||. |-|.|-+--|.. ||-..+.+
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999987 7876 999999999998 89887755
No 138
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=92.23 E-value=0.88 Score=38.83 Aligned_cols=96 Identities=13% Similarity=0.192 Sum_probs=59.5
Q ss_pred EEe-cCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCC-------CCCCCCCCC-CC-CCcceeEEeCC
Q 007890 462 YRL-NFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDI-------YNDPKKYNL-VN-PIMKNTVPVHR 531 (586)
Q Consensus 462 ~~~-~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~-------~~~~~~~n~-~~-p~~rDTv~vpp 531 (586)
+.+ +.|+.|.+++.|.+.. + ---=+|.|-+...+. ... ......+-. .+ .....+..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 888 8899999999998753 1 000134444433210 000 000000000 01 12335667899
Q ss_pred CCEEEEEEEeC--Ccee-eEEeecchhhhhcCceEEEecc
Q 007890 532 YGWTALRFRAD--NPGA-WAFHCHIESHFYMGMGVVFAEG 568 (586)
Q Consensus 532 ~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 568 (586)
|+...+-|.++ .||. |-|.|-+--|.. ||-..+.+.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999999999988 899888653
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=88.08 E-value=7.3 Score=32.53 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=53.9
Q ss_pred CCcEE--EEEEeecCCcceEEEEeC-CCeeEE--EecCCcccc--------ceEEeEEEEccCceEEEEEEeCC-CCCCc
Q 007890 249 PGKTY--RLRISSLTALSALSFQIE-GHNMTV--VEADGHNVE--------PFVVQNLFIYSGETYSVLIKADQ-NPTRN 314 (586)
Q Consensus 249 ~G~~~--rlRliN~g~~~~~~~~i~-gh~~~v--ia~DG~~~~--------P~~~~~l~l~pGqR~dVlv~~~~-~~~g~ 314 (586)
.|+.+ .|.+.|.+.. ...+.+. |+.+.+ ...+|..+- ........|.||+...+-...++ -++|.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45554 6778898866 5677764 555444 444576551 34567899999999999999985 25799
Q ss_pred eEEEEEeecCC
Q 007890 315 YWATTNIVSRN 325 (586)
Q Consensus 315 y~l~~~~~~~~ 325 (586)
|.+.+......
T Consensus 95 Ytl~a~l~~~~ 105 (120)
T 3isy_A 95 YEVKVTFKGRA 105 (120)
T ss_dssp EEEEEEECCEE
T ss_pred EEEEEEEEeee
Confidence 99998776543
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=84.69 E-value=3 Score=38.38 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=54.8
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-cccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~~ 151 (586)
..|.+..|+.|++.|++. +.- ||..++.- | .+.-+-||..-...|.++++|+|+..|. .-...-
T Consensus 41 n~l~lP~g~~V~~~lTS~--DVi-----HSF~IP~l----g----vK~daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN--SVM-----HSFFIPRL----G----SQIYAMAGMQTRLHLIANEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES--SSC-----EEEEEGGG----T----EEEEECTTCCEEEEECCSSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC--Cce-----eeEEeccc----C----cEEEecCCceEEEEEEeCCCeEEEEEcccccccch
Confidence 369999999999999998 333 44444310 1 1234678999999999999999999997 333333
Q ss_pred CcceEEEEEE-CC
Q 007890 152 AGLYGSIRVS-LP 163 (586)
Q Consensus 152 ~Gl~G~liV~-~~ 163 (586)
..|.+.++|. ++
T Consensus 106 s~M~~~v~vv~~~ 118 (205)
T 1cyx_A 106 SGMKFKAIATPDR 118 (205)
T ss_dssp TTCCEEEEEESSH
T ss_pred hhceEEEEEECCH
Confidence 5688888887 44
No 141
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=83.24 E-value=8.7 Score=36.89 Aligned_cols=76 Identities=18% Similarity=0.213 Sum_probs=53.3
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-cccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~~ 151 (586)
..|++..|+.|++.+++. +.- ||..++.- | + +.-+-||..-...|.++++|+|+..|. .-...-
T Consensus 171 n~l~lP~g~~v~~~~tS~--DVi-----Hsf~ip~l----~---~-k~da~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA--DVI-----HSWTVPAF----G---V-KQDAVPGRLAQLWFRAEREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES--SSC-----EEEEEGGG----T---E-EEEECBTCCEEEEEECCSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC--ccc-----ceeeeccc----C---c-eEEecCCceeEEEEecCCcEEEEEEChHhcccCc
Confidence 469999999999999988 433 44443210 1 1 123568998899999999999999997 222223
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
..|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 457788887764
No 142
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=78.07 E-value=22 Score=29.58 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=45.8
Q ss_pred EEECCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCc---cccccCCCCCeEEEEEEcC---CC
Q 007890 64 ITINGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEG---VTQCPILPGETFTYKFVVD---RP 137 (586)
Q Consensus 64 ~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~---~~q~~i~pG~~~~Y~f~~~---~~ 137 (586)
...|-+--.=+|+..-|.+..+.|.+. .. -.+. .|+||-.. +....|+||++.+|+...+ .+
T Consensus 25 tv~N~s~~~v~l~f~Sgq~~Df~v~d~-~G---------~~Vw--rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~p 92 (120)
T 3isy_A 25 SLKNQSERAIEFQFSTGQKFELVVYDS-EH---------KERY--RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEP 92 (120)
T ss_dssp EEEECSSSCEEEEESSSCCEEEEEECT-TC---------CEEE--ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCS
T ss_pred EEEcCCCCcEEEEeCCCCEEEEEEECC-CC---------CEEE--EccccchhhhhhceEEECCCCEEEEEEEeCCCCCC
Confidence 333443334467777777777777775 22 1222 45777653 2346899999999999984 58
Q ss_pred cceeeecc
Q 007890 138 GTYLYHAH 145 (586)
Q Consensus 138 Gt~wYH~H 145 (586)
|+|..+.-
T Consensus 93 G~Ytl~a~ 100 (120)
T 3isy_A 93 GTYEVKVT 100 (120)
T ss_dssp EEEEEEEE
T ss_pred ccEEEEEE
Confidence 99987764
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=77.62 E-value=5.1 Score=39.23 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=54.9
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-cccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~~ 151 (586)
..|.+..|+.|++.+++. +.- |+..++.- |+ +.-+-||..-+..|.++++|+|+..|. .-...-
T Consensus 189 N~lvlP~g~~V~~~ltS~--DVi-----Hsf~iP~l----g~----k~daiPG~~n~~~~~~~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT--DVI-----HAWTIPAF----AV----KQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEES--SSC-----EEEEEGGG----TE----EEEECTTCCEEEEEECSSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeC--Ccc-----ceeeEccc----Cc----eEEecCCceEEEEEEeCCCEEEEEEcccccCcCc
Confidence 579999999999999997 333 34433210 11 233568998899999999999999998 333333
Q ss_pred CcceEEEEEECCC
Q 007890 152 AGLYGSIRVSLPE 164 (586)
Q Consensus 152 ~Gl~G~liV~~~~ 164 (586)
..|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 5688888887653
No 144
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=73.90 E-value=0.99 Score=37.72 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=29.4
Q ss_pred EEEEcCCCcceeeeccccccccCcceEEE-EEECCCC
Q 007890 130 YKFVVDRPGTYLYHAHYGMQREAGLYGSI-RVSLPEG 165 (586)
Q Consensus 130 Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~~ 165 (586)
..+++..+|++||-|-...|=..||...| .|.....
T Consensus 72 ~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEECCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 46778999999999998888889999999 8876543
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=72.43 E-value=25 Score=32.91 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=51.9
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-cccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~~ 151 (586)
..+.+..|..|++.++.. +.-+|...-.+.. +.-.-||..-...|.++++|+|+..|. .-+..-
T Consensus 140 n~lvlP~~~~Vr~~vtS~--DViHsf~vP~lg~-------------K~DaiPGr~n~~~~~~~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE--DVLHSWAVPSLGL-------------KTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEECCSSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC--cccceeeecccCc-------------EEEecCCceEEEEEecCCcEEEEEEehhhccccc
Confidence 679999999999999997 4433333322211 123467888888999999999999997 222222
Q ss_pred CcceEEEEEECC
Q 007890 152 AGLYGSIRVSLP 163 (586)
Q Consensus 152 ~Gl~G~liV~~~ 163 (586)
.-|.+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 347677777654
No 146
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=65.85 E-value=3.6 Score=33.86 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.2
Q ss_pred EEEEcCCCcceeeeccccccccCcceEEEEEECC
Q 007890 130 YKFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLP 163 (586)
Q Consensus 130 Y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 163 (586)
..+++..+|++||-|-...|=..||...|.|...
T Consensus 72 ~~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 72 DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 3678899999999999888888999999999754
No 147
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=63.97 E-value=7.4 Score=33.43 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=30.3
Q ss_pred EEEc-CCCcceeeeccccccccCcceEEEEEECCCC
Q 007890 131 KFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPEG 165 (586)
Q Consensus 131 ~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 165 (586)
.|++ +.+|++||-|-...|=..||...|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 6788 8999999999988888899999999987643
No 148
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=61.96 E-value=16 Score=33.47 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=49.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.|.+.+-+ | .|+|-+.| .. +.+-||....+.|.+
T Consensus 43 l~lP~g~~V~~~lTS~DVi-------H-------SF~IP~lg------------------vK---~daiPGr~n~l~~~~ 87 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVM-------H-------SFFIPRLG------------------SQ---IYAMAGMQTRLHLIA 87 (205)
T ss_dssp EEEETTSCEEEEEEESSSC-------E-------EEEEGGGT------------------EE---EEECTTCCEEEEECC
T ss_pred EEEeCCCEEEEEEecCCce-------e-------eEEecccC------------------cE---EEecCCceEEEEEEe
Confidence 8899999999999997654 4 45542221 11 223467778889999
Q ss_pred CCceeeEEeecchhhhhcC-ceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMG-MGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~G-M~~~~~~ 567 (586)
+.||.|...|-..-...-. |-..+.+
T Consensus 88 ~~pG~y~g~CsE~CG~~Hs~M~~~v~v 114 (205)
T 1cyx_A 88 NEPGTYDGICAEICGPGHSGMKFKAIA 114 (205)
T ss_dssp SSSEEEEEEECSCCSTTSTTCCEEEEE
T ss_pred CCCeEEEEEcccccccchhhceEEEEE
Confidence 9999999999876655444 4444433
No 149
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.54 E-value=25 Score=34.25 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=48.7
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.+.+.+-. |.|.+=.... . +.+-||....+.|.+
T Consensus 191 lvlP~g~~V~~~ltS~DVi-------Hsf~iP~lg~-------------------------k---~daiPG~~n~~~~~~ 235 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVI-------HAWTIPAFAV-------------------------K---QDAVPGRIAQLWFSV 235 (298)
T ss_dssp EEEESSSEEEEEEEESSSC-------EEEEEGGGTE-------------------------E---EEECTTCCEEEEEEC
T ss_pred EEEEcCCEEEEEEEeCCcc-------ceeeEcccCc-------------------------e---EEecCCceEEEEEEe
Confidence 8999999999999997754 5544422211 1 223467777899999
Q ss_pred CCceeeEEeecchhhhh-cCceEEEe
Q 007890 542 DNPGAWAFHCHIESHFY-MGMGVVFA 566 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d-~GM~~~~~ 566 (586)
+.||.|...|.-.--.. ..|-..++
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~ 261 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVK 261 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEE
T ss_pred CCCEEEEEEcccccCcCccCCeeEEE
Confidence 99999999999655443 34555553
No 150
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=50.27 E-value=13 Score=36.71 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=51.7
Q ss_pred CcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEcCCCcceeeecc-cccccc
Q 007890 73 PTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVVDRPGTYLYHAH-YGMQRE 151 (586)
Q Consensus 73 P~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~wYH~H-~~~q~~ 151 (586)
..|++..|..|++.++.. +.-++...-.+.. +.-+-||..-...|.++++|+|+..|. .-...-
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~-------------k~DaiPGr~n~~~~~~~~~G~y~g~CsE~CG~~H 215 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGS-------------QIYAMAGMQTRLHLIANEPGTYDGISASYSGPGF 215 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTE-------------EEEECBTSCEEEEEECCSCBCCEEBCCSCCSTTT
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCc-------------EEeecCCcceeeEEecCCCeEEEEeccccchhhH
Confidence 478999999999999987 4433333322211 233568988889999999999999997 222233
Q ss_pred CcceEEEEEE
Q 007890 152 AGLYGSIRVS 161 (586)
Q Consensus 152 ~Gl~G~liV~ 161 (586)
..|.+.++|.
T Consensus 216 s~M~~~v~vv 225 (315)
T 1fft_B 216 SGMKFKAIAT 225 (315)
T ss_dssp TTCCEECCBC
T ss_pred HhccceEEEe
Confidence 5577777776
No 151
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=50.03 E-value=31 Score=28.42 Aligned_cols=46 Identities=15% Similarity=0.304 Sum_probs=31.7
Q ss_pred EEEEEEeecCCc-ceEEEEeCCC-eeEEEecCCccccceEEeEEEEccCceEEEEEEe
Q 007890 252 TYRLRISSLTAL-SALSFQIEGH-NMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKA 307 (586)
Q Consensus 252 ~~rlRliN~g~~-~~~~~~i~gh-~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~ 307 (586)
.|+|+|+|.+.. ..+.+++.|. .+.++. +. .+.|.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEEE
Confidence 589999999976 4577777663 244332 11 4999999977766654
No 152
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=48.92 E-value=8.7 Score=30.67 Aligned_cols=29 Identities=7% Similarity=0.227 Sum_probs=25.1
Q ss_pred EEEcCCCcceeeeccccccccCcceEEEEE
Q 007890 131 KFVVDRPGTYLYHAHYGMQREAGLYGSIRV 160 (586)
Q Consensus 131 ~f~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 160 (586)
.+++ .+|++||-|-...+=..||..+|.|
T Consensus 67 ~v~L-~~g~~yFic~~~~HC~~Gmkl~I~V 95 (96)
T 2cbp_A 67 QIKL-PKGQSYFICNFPGHCQSGMKIAVNA 95 (96)
T ss_dssp EEEC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEe-cCCCEEEEcCCCCccccCCEEEEEE
Confidence 5677 8999999999888888999988876
No 153
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=44.72 E-value=70 Score=26.25 Aligned_cols=64 Identities=11% Similarity=0.115 Sum_probs=38.4
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecc-----------eeeccCCCC-CCCCccccccCCCCCeEEEEEEcCCCcc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHG-----------IRQIGTPWA-DGTEGVTQCPILPGETFTYKFVVDRPGT 139 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HG-----------l~~~~~~~~-DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt 139 (586)
|-+|+++.||++.|.|.-+ .....+=.... +.+... +. |.. ..-.+..|++..+.|++.++|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~N-PtTGY~W~~~~~~~~~~l~~~gl~~~s~-y~~~~~---~~~~vG~gG~~~~~f~a~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGN-PTTGYMWTRVGFVGKDVLSDEILEVVCK-YTPTPS---STPMVGVGGIYVVLVKPRKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECC-TTSSCEEEETTCTTSSCCCCSSEEEEEE-EECCCC---SSSSSCCCCEEEEEEEECSSSS
T ss_pred CcEEEEcCCCEEEEEeCCC-CCCCcEEEEecCCCcccccccccEEEEe-EEeCCC---CCCCcCCCceEEEEEEEeCCce
Confidence 5689999999999999987 54433333332 111000 00 000 0112556788899999988886
Q ss_pred e
Q 007890 140 Y 140 (586)
Q Consensus 140 ~ 140 (586)
.
T Consensus 89 ~ 89 (116)
T 2c34_A 89 H 89 (116)
T ss_dssp E
T ss_pred E
Confidence 3
No 154
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=44.57 E-value=1.4e+02 Score=24.93 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=45.9
Q ss_pred EEeCCcEE--EEEEeecCCcceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceEEEEEeec
Q 007890 246 TVIPGKTY--RLRISSLTALSALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYWATTNIVS 323 (586)
Q Consensus 246 ~v~~G~~~--rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~l~~~~~~ 323 (586)
.+++|+.+ +..+-|.|....-.+.+ .+. .||..+. ...+.|++|+.-.|.+.......|+|.+.+....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 45678876 56688999765432222 111 2565432 2245799999988888876545789999887655
Q ss_pred CC
Q 007890 324 RN 325 (586)
Q Consensus 324 ~~ 325 (586)
..
T Consensus 99 ~n 100 (127)
T 3idu_A 99 EN 100 (127)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 155
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=43.87 E-value=49 Score=31.55 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=48.3
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.+.+.+-. |.|-+=... ...| +-||....+.|.+
T Consensus 173 l~lP~g~~v~~~~tS~DVi-------Hsf~ip~l~-------------------------~k~d---a~PG~~n~~~~~~ 217 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVI-------HSWTVPAFG-------------------------VKQD---AVPGRLAQLWFRA 217 (262)
T ss_dssp EEEETTSEEEEEEEESSSC-------EEEEEGGGT-------------------------EEEE---ECBTCCEEEEEEC
T ss_pred EEEecCCEEEEEEEECccc-------ceeeecccC-------------------------ceEE---ecCCceeEEEEec
Confidence 8899999999999987653 544443221 1223 3466777889999
Q ss_pred CCceeeEEeecchhhhhcC-ceEEEe
Q 007890 542 DNPGAWAFHCHIESHFYMG-MGVVFA 566 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~G-M~~~~~ 566 (586)
+.||.|...|--.--..-. |-..+.
T Consensus 218 ~~~G~y~g~Cse~CG~~H~~M~~~v~ 243 (262)
T 2gsm_B 218 EREGIFFGQCSELCGISHAYMPITVK 243 (262)
T ss_dssp CSCEEEEECCCSCCSTTGGGCCEEEE
T ss_pred CCcEEEEEEChHhcccCcccCeEEEE
Confidence 9999999999865544433 444443
No 156
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=43.85 E-value=13 Score=29.27 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=43.4
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcccccc---CCCCCeEEEEEEcCCCcceeeeccccc
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVTQCP---ILPGETFTYKFVVDRPGTYLYHAHYGM 148 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~q~~---i~pG~~~~Y~f~~~~~Gt~wYH~H~~~ 148 (586)
.-..+++.||.|+.+..+. . |-..+......| +-....| ...|. -.|++. +|++||-|-...
T Consensus 14 a~~~~f~vGD~L~F~y~~~----~-----hsV~~v~~~~y~--~C~~~~~~~~~~~G~---~~v~L~-~g~~yFic~~~~ 78 (91)
T 1f56_A 14 ARGKSFRAGDVLVFKYIKG----Q-----HNVVAVNGRGYA--SCSAPRGARTYSSGQ---DRIKLT-RGQNYFICSFPG 78 (91)
T ss_dssp CTTCCBCTTCEEEEECCBT----T-----BCEEEECHHHHH--TTCCCTTCEEECSSE---EEEECC-SEEEEEECCSTT
T ss_pred cCCccEeCCCEEEEEccCC----C-----CeEEEECHHHcC--CcCCCCCcccccCCC---cEEEeC-CCCeEEEcCCCC
Confidence 3456899999999988765 1 222221000000 0000001 12232 256665 799999999888
Q ss_pred cccCcceEEEEE
Q 007890 149 QREAGLYGSIRV 160 (586)
Q Consensus 149 q~~~Gl~G~liV 160 (586)
+=..||..+|.|
T Consensus 79 HC~~Gmkl~I~v 90 (91)
T 1f56_A 79 HCGGGMKIAINA 90 (91)
T ss_dssp TTTTTCEEEEEE
T ss_pred ccccCCEEEEEE
Confidence 888999988876
No 157
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=40.96 E-value=61 Score=32.24 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=20.0
Q ss_pred cccCCCCCeEEEEEEcC------CCcceeeecc
Q 007890 119 QCPILPGETFTYKFVVD------RPGTYLYHAH 145 (586)
Q Consensus 119 q~~i~pG~~~~Y~f~~~------~~Gt~wYH~H 145 (586)
...|+||++.+.+|.+. ..|+|-++.-
T Consensus 94 f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~ 126 (343)
T 2x3c_A 94 FQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQ 126 (343)
T ss_dssp EEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC
T ss_pred cEEeCCCCeEEEEEehhhccccCCCceEEEEEe
Confidence 35789999999999882 4566666543
No 158
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=40.23 E-value=45 Score=31.10 Aligned_cols=70 Identities=14% Similarity=0.227 Sum_probs=48.2
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.+.+.+-. |. |+|=+.| ...| .-||..-.+.|.+
T Consensus 142 lvlP~~~~Vr~~vtS~DVi-------Hs-------f~vP~lg------------------~K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 142 VVLPMEMTIRMLVSSEDVL-------HS-------WAVPSLG------------------LKTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp EEEETTSCEEEEEEESSSC-------EE-------EEEGGGT------------------EEEE---ECTTCCEEEEECC
T ss_pred EEEecCCEEEEEEEeCccc-------ce-------eeecccC------------------cEEE---ecCCceEEEEEec
Confidence 8999999999999987653 54 4442211 1223 3456677788999
Q ss_pred CCceeeEEeecchhhhhcCce-EEEe
Q 007890 542 DNPGAWAFHCHIESHFYMGMG-VVFA 566 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~GM~-~~~~ 566 (586)
+.||.+...|.-.-....+.| ..++
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~ 212 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLE 212 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEE
T ss_pred CCcEEEEEEehhhcccccccCeEEEE
Confidence 999999999987665554444 4443
No 159
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=34.99 E-value=1.3e+02 Score=24.74 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=36.3
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCccc--------c--------ccCCCCCeEEEEEEcC
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGVT--------Q--------CPILPGETFTYKFVVD 135 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~~--------q--------~~i~pG~~~~Y~f~~~ 135 (586)
+-+|.++.||.+.|.|.-+ .....+=...+..- ..-.||.-.++ . ..+..|+...+.|++.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~N-PtTGY~W~~~~~~~--~~l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESN-PTTGYTWLRSGLAG--TELSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKAL 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCC-CCCCeEEEEecCcc--ccCCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEEe
Confidence 4569999999999998866 44333322222100 00012211000 0 0345567888888888
Q ss_pred CCcce
Q 007890 136 RPGTY 140 (586)
Q Consensus 136 ~~Gt~ 140 (586)
++|+.
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 88864
No 160
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=34.69 E-value=79 Score=26.36 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=37.7
Q ss_pred EECCCCCCCcEEeecCCEEEEEEE---eCCCCCCe--eEEe--cceeecc-CCCCCCCCccccccCCCCCeEEEEEEc
Q 007890 65 TINGRTPGPTIQARQNDTVIVELK---NSLLTENV--AIHW--HGIRQIG-TPWADGTEGVTQCPILPGETFTYKFVV 134 (586)
Q Consensus 65 ~~Ng~~pgP~i~v~~Gd~v~i~v~---N~l~~~~~--siH~--HGl~~~~-~~~~DGv~~~~q~~i~pG~~~~Y~f~~ 134 (586)
.++|--+.+.=.++.|..+.|.+. |. ..... .+|+ .|+..+- ....|+=.+ ..|||.+|+.++|.+..
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~-~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQ-NTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCS-CBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCC-ccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 444431344557788888777776 22 22222 3332 3444421 112233222 57999999999999766
No 161
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=33.68 E-value=81 Score=26.32 Aligned_cols=68 Identities=21% Similarity=0.352 Sum_probs=38.7
Q ss_pred EECCCCCCCcEEeecCCEEEEEEE---eCCCCCCeeEEec----ceeec-cCCCCCCCCccccccCCCCCeEEEEEEc
Q 007890 65 TINGRTPGPTIQARQNDTVIVELK---NSLLTENVAIHWH----GIRQI-GTPWADGTEGVTQCPILPGETFTYKFVV 134 (586)
Q Consensus 65 ~~Ng~~pgP~i~v~~Gd~v~i~v~---N~l~~~~~siH~H----Gl~~~-~~~~~DGv~~~~q~~i~pG~~~~Y~f~~ 134 (586)
.++|- +.+.=.+++|..+.|.+. |. .........| |+..+ ..+..|+=..-..|||.+|+.++|.+.+
T Consensus 19 ~V~~C-~~~PC~l~rG~~~~i~i~f~~~~-~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 19 NVSPC-PTQPCKLHRGQSYSVNVTFTSNT-QSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEESC-SSSSEEEETTCEEEEEEEEEESS-CBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EECCC-CCCCCEEEcCCeEEEEEEEEccc-ccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 34443 345667788888777776 33 2223333333 44442 1122343322247999999999998776
No 162
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=29.36 E-value=87 Score=30.70 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=48.5
Q ss_pred EEecCCCEEEEEEecCCCCCCCCCCCCCccccCCCeEEEeeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 007890 462 YRLNFNSTVDIILQNANSLSNKTSETHPWHLHGHDFWVLGYGEGKFDIYNDPKKYNLVNPIMKNTVPVHRYGWTALRFRA 541 (586)
Q Consensus 462 ~~~~~g~~ve~~l~N~~~~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vpp~g~v~irf~a 541 (586)
+.++.|+.|++.+...+-. |. |+|-+.+ ...| +-||-...+.|.+
T Consensus 153 l~lP~g~~V~~~lTS~DVi-------Hs-------f~IP~lg------------------~k~D---aiPGr~n~~~~~~ 197 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNSVM-------NS-------FFIPRLG------------------SQIY---AMAGMQTRLHLIA 197 (315)
T ss_dssp CCCCSSSEEEEEECBSSSC-------EE-------EEEGGGT------------------EEEE---ECBTSCEEEEEEC
T ss_pred EEEeCCCEEEEEEEeCCcc-------ce-------eeecccC------------------cEEe---ecCCcceeeEEec
Confidence 7789999999999987654 54 4442211 1223 3466777889999
Q ss_pred CCceeeEEeecchhhhhcC-ceEEEec
Q 007890 542 DNPGAWAFHCHIESHFYMG-MGVVFAE 567 (586)
Q Consensus 542 dnpG~w~~HCHil~H~d~G-M~~~~~~ 567 (586)
+.||.|...|--.--.... |-..+.+
T Consensus 198 ~~~G~y~g~CsE~CG~~Hs~M~~~v~v 224 (315)
T 1fft_B 198 NEPGTYDGISASYSGPGFSGMKFKAIA 224 (315)
T ss_dssp CSCBCCEEBCCSCCSTTTTTCCEECCB
T ss_pred CCCeEEEEeccccchhhHHhccceEEE
Confidence 9999999999866555444 4455543
No 163
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=28.62 E-value=69 Score=26.86 Aligned_cols=47 Identities=30% Similarity=0.408 Sum_probs=27.6
Q ss_pred EEEEEeCCCCCC---eeEEecceeeccC---CCCCCCCccccccCCCCCeEEEEE
Q 007890 84 IVELKNSLLTEN---VAIHWHGIRQIGT---PWADGTEGVTQCPILPGETFTYKF 132 (586)
Q Consensus 84 ~i~v~N~l~~~~---~siH~HGl~~~~~---~~~DGv~~~~q~~i~pG~~~~Y~f 132 (586)
.|++.|. .+.+ .+-||.=....+. -.-+||-|- |.-|.||++|.|.=
T Consensus 34 ~I~I~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~-qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNA-GAVPARLVARHWQITDGNGRTEQVDGEGVVGE-QPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTSCEEEEEESSBTTB-CCEECTTCEEEEEE
T ss_pred EEEEEeC-CCCCEEEEeceEEEEeCCCCEEEEECCCeecC-CCcCCCCCceEEeC
Confidence 4777887 6655 4557763322110 113566543 56789999888754
No 164
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=27.06 E-value=2e+02 Score=24.13 Aligned_cols=66 Identities=20% Similarity=0.185 Sum_probs=36.9
Q ss_pred CCcEEeecCCEEEEEEEeCCCCCCeeEEecceeeccCCCCCCCCcc-------ccccCCCCCeEEEEEEcCCCcce
Q 007890 72 GPTIQARQNDTVIVELKNSLLTENVAIHWHGIRQIGTPWADGTEGV-------TQCPILPGETFTYKFVVDRPGTY 140 (586)
Q Consensus 72 gP~i~v~~Gd~v~i~v~N~l~~~~~siH~HGl~~~~~~~~DGv~~~-------~q~~i~pG~~~~Y~f~~~~~Gt~ 140 (586)
|-+|+++.||.+.|.|.-+ .....+=..-.. .+..-.|++-.+ ..-.+..|++..+.|++.++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~N-PTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSN-PTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVKAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEEC-GGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEECSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCC-CCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEEccCceE
Confidence 5689999999999999987 433222221110 000011221000 01134556788888888888864
No 165
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=26.94 E-value=27 Score=29.37 Aligned_cols=20 Identities=20% Similarity=0.232 Sum_probs=17.0
Q ss_pred EEEEeCCcEEEEEEeecCCc
Q 007890 244 VITVIPGKTYRLRISSLTAL 263 (586)
Q Consensus 244 ~~~v~~G~~~rlRliN~g~~ 263 (586)
.++|++||+|||.+.|-+..
T Consensus 72 ~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp EEEEETTCEEEEEETTEEEE
T ss_pred EEEecCCCEEEEEeCCcEEE
Confidence 59999999999999986643
No 166
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.09 E-value=70 Score=26.76 Aligned_cols=46 Identities=24% Similarity=0.406 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCC---eeEEecceeeccCCC---CCCCCccccccCCCCCeEEEE
Q 007890 84 IVELKNSLLTEN---VAIHWHGIRQIGTPW---ADGTEGVTQCPILPGETFTYK 131 (586)
Q Consensus 84 ~i~v~N~l~~~~---~siH~HGl~~~~~~~---~DGv~~~~q~~i~pG~~~~Y~ 131 (586)
.|++.|. .+.+ .+-||.=....+.-. -+||-|- |.-|.||++|.|.
T Consensus 33 ~I~I~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~-qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 33 LITIKNL-SSQTVQLMSRRWLITDADGKQTVVEGDGVVGE-QPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTCCEEEEEEESBTTB-CCEECTTCEEEEE
T ss_pred EEEEEEC-CCCCEEEEecEEEEEeCCCCEEEEECCceEcC-CCcCCCCCceEEe
No 167
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.84 E-value=1.2e+02 Score=30.37 Aligned_cols=53 Identities=23% Similarity=0.324 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCCeeE---EecceeeccCCC-------------CCCCCccccccCCCCCeEEEEEEcCCC
Q 007890 82 TVIVELKNSLLTENVAI---HWHGIRQIGTPW-------------ADGTEGVTQCPILPGETFTYKFVVDRP 137 (586)
Q Consensus 82 ~v~i~v~N~l~~~~~si---H~HGl~~~~~~~-------------~DGv~~~~q~~i~pG~~~~Y~f~~~~~ 137 (586)
++.++|+|+ .+++..| -.-|++.....- .+|.. ... ||+|||+.+.+.+++.+
T Consensus 301 ~~~~~VtN~-g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~da 369 (419)
T 3rfr_A 301 TINVKVKNG-TSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQDA 369 (419)
T ss_dssp EEEEEEECC-SSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEECH
T ss_pred EEEEEEecC-CCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeehH
No 168
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=25.71 E-value=1.9e+02 Score=22.48 Aligned_cols=69 Identities=13% Similarity=0.188 Sum_probs=37.3
Q ss_pred EeCCcEEEEEEeecCCcceEEEEeCCC--eeEEEecCCccccceEEeEEEEccCceEEEEEEeCCC-CCCceEEEEEe
Q 007890 247 VIPGKTYRLRISSLTALSALSFQIEGH--NMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQN-PTRNYWATTNI 321 (586)
Q Consensus 247 v~~G~~~rlRliN~g~~~~~~~~i~gh--~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~-~~g~y~l~~~~ 321 (586)
-+|||++++|++--.... .. ..+- .+++..-+|..+.- -.........++.-+.+++. ..|+|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~-~p--~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENF-HP--LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGG-CB--CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCC-cC--CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 478999999977543221 10 1111 34455555653211 11222334566777777654 35899998764
No 169
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.19 E-value=2.5e+02 Score=27.78 Aligned_cols=69 Identities=14% Similarity=0.179 Sum_probs=41.7
Q ss_pred EEEEEEeecCCcceEEEE---eCC---CeeEEEecCCcccc----------ceEEeEEEEccCceEEEEEEeCC----CC
Q 007890 252 TYRLRISSLTALSALSFQ---IEG---HNMTVVEADGHNVE----------PFVVQNLFIYSGETYSVLIKADQ----NP 311 (586)
Q Consensus 252 ~~rlRliN~g~~~~~~~~---i~g---h~~~via~DG~~~~----------P~~~~~l~l~pGqR~dVlv~~~~----~~ 311 (586)
++..-|-|.|....--|. +|+ ..|.| ..||..++ |..-+-+.|+|||.+++.+++.. ..
T Consensus 39 ~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs~ 117 (343)
T 2x3c_A 39 RVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMSA 117 (343)
T ss_dssp EEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCCS
T ss_pred EEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccCC
Confidence 445556666654321111 222 24555 46776541 32356899999999999999864 24
Q ss_pred CCceEEEEEe
Q 007890 312 TRNYWATTNI 321 (586)
Q Consensus 312 ~g~y~l~~~~ 321 (586)
+|+|.+++..
T Consensus 118 gG~y~v~~~g 127 (343)
T 2x3c_A 118 QGQYSIRYQL 127 (343)
T ss_dssp CEEEEEEEC-
T ss_pred CceEEEEEee
Confidence 6888888754
No 170
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=23.71 E-value=1.1e+02 Score=24.50 Aligned_cols=51 Identities=25% Similarity=0.244 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCC---eeEEecceeeccCCCCCCCCccccccCCCCCeEEEEEEc--CCCcc
Q 007890 82 TVIVELKNSLLTEN---VAIHWHGIRQIGTPWADGTEGVTQCPILPGETFTYKFVV--DRPGT 139 (586)
Q Consensus 82 ~v~i~v~N~l~~~~---~siH~HGl~~~~~~~~DGv~~~~q~~i~pG~~~~Y~f~~--~~~Gt 139 (586)
.++|+|+|- ++.+ ..++.-|. .-..+ --+....|.||++.++++.. ..+|.
T Consensus 23 ~v~vsf~NP-L~~~L~~c~~~vEG~-----GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNP-LPVTLTNVVFRLEGS-----GLQRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECC-SSSCBCSEEEEEEET-----TTEEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECC-CCCcccCEEEEEECC-----CCCcc-eEEEcCcCCCCCEEEEEEEEecCcccc
No 171
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=23.59 E-value=84 Score=26.78 Aligned_cols=46 Identities=28% Similarity=0.385 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCC---eeEEecceeeccCCCC---CCCCccccccCCCCCeEEEE
Q 007890 84 IVELKNSLLTEN---VAIHWHGIRQIGTPWA---DGTEGVTQCPILPGETFTYK 131 (586)
Q Consensus 84 ~i~v~N~l~~~~---~siH~HGl~~~~~~~~---DGv~~~~q~~i~pG~~~~Y~ 131 (586)
.|++.|. .+.+ .+-||.=....+.-.. +||-|- |.-|.||++|.|.
T Consensus 38 ~ItI~N~-~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGe-qPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNT-GSHPAQVISRHWIITDGEERVQEVRGLGVVGQ-QPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEECTTSCEEEEEEESSSSC-CCEECTTCEEEEE
T ss_pred EEEEEeC-CCCCEEEEecEEEEEeCCCCEEEEECCCeecC-CCcCCCCCceEEc
No 172
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=22.79 E-value=38 Score=26.98 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=21.7
Q ss_pred eEEEEECCCCCCCcEEeecCCEEEE
Q 007890 61 KVVITINGRTPGPTIQARQNDTVIV 85 (586)
Q Consensus 61 ~~~~~~Ng~~pgP~i~v~~Gd~v~i 85 (586)
.....+||+.-.+.-.++.||+|+|
T Consensus 58 ~~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 58 TNKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp TSEEEEEECSCCTTCBCCTTCEEEE
T ss_pred ccEEEEcCEECCCCccCCCCCEEEE
Confidence 3578999998778889999999998
No 173
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.38 E-value=3.4e+02 Score=22.62 Aligned_cols=71 Identities=14% Similarity=0.290 Sum_probs=39.7
Q ss_pred CCCCCCCcEEeecCCEEEEEEEeCCCCCCeeEEec---c--eeeccCC-CCCCCCccccccCCCCCeEEEEEEcCCCcce
Q 007890 67 NGRTPGPTIQARQNDTVIVELKNSLLTENVAIHWH---G--IRQIGTP-WADGTEGVTQCPILPGETFTYKFVVDRPGTY 140 (586)
Q Consensus 67 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~siH~H---G--l~~~~~~-~~DGv~~~~q~~i~pG~~~~Y~f~~~~~Gt~ 140 (586)
...--|-+|+++.||++.|.|.-+ .....+=... | +...... +.+. + ...-.+..|+...+.|++.++|+.
T Consensus 29 ~~~~~g~tI~v~~Ge~~~I~L~~N-PTTGY~W~~~~~~~~vl~~l~~~~y~~~-~-~~~~~vGagG~~~w~f~A~~~G~~ 105 (132)
T 2wgn_B 29 DDADDCSPLKLTQGQELVLTLPSN-PTTGFRWELRNPAASVLKRLGPEVYSNS-E-EDSGLVGSGGESTWRFRVAASGDD 105 (132)
T ss_dssp CCSSCCSCEEECTTCEEEEEECCC-TTTSCEEEEEECCTTTEEECCSCCSCSS-C-SSCCCSSSSCCEEEEEEECSCEEE
T ss_pred ecccCCcEEEEcCCCEEEEEeCCC-CCCCeEEEEecCCCceEEecccceecCC-C-CccCCcCCCceEEEEEEEcCCceE
Confidence 334447789999999999999876 4332221111 1 1111100 0110 0 011235567888899999888864
No 174
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=21.62 E-value=3.3e+02 Score=25.89 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=41.6
Q ss_pred EEEEeCCcEEE-------EEEeecCCcceEEEEeCCCeeEEEecCCccccceEEeEEEEccCceEEEEEEeCCCCCCceE
Q 007890 244 VITVIPGKTYR-------LRISSLTALSALSFQIEGHNMTVVEADGHNVEPFVVQNLFIYSGETYSVLIKADQNPTRNYW 316 (586)
Q Consensus 244 ~~~v~~G~~~r-------lRliN~g~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~l~pGqR~dVlv~~~~~~~g~y~ 316 (586)
.+++++|+.+. +-|||.+.. ..+.++|..+..++.=-....-..-+.|.|..|. +|.|++.. +..+.
T Consensus 33 ~~~L~~Ge~~~~~~~~~E~~iv~l~G~--~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~~--~~~~~ 106 (270)
T 2qjv_A 33 VWQLXAGESITLPSDERERCLVLVAGL--ASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAET--DLELA 106 (270)
T ss_dssp EEEECTTCEEEECCSSEEEEEEEEESC--EEEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEESS--SEEEE
T ss_pred EEEecCCCEEEecCCCcEEEEEEecce--EEEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEecC--CceEE
Confidence 55666666653 346666644 4666677777665321111111123789999999 55666665 45666
Q ss_pred EEEEe
Q 007890 317 ATTNI 321 (586)
Q Consensus 317 l~~~~ 321 (586)
+....
T Consensus 107 v~sAp 111 (270)
T 2qjv_A 107 VCSAP 111 (270)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 66544
No 175
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=21.30 E-value=81 Score=26.68 Aligned_cols=46 Identities=20% Similarity=0.298 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCC---eeEEecceeeccCCC---CCCCCccccccCCCCCeEEEE
Q 007890 84 IVELKNSLLTEN---VAIHWHGIRQIGTPW---ADGTEGVTQCPILPGETFTYK 131 (586)
Q Consensus 84 ~i~v~N~l~~~~---~siH~HGl~~~~~~~---~DGv~~~~q~~i~pG~~~~Y~ 131 (586)
.|++.|. .+.+ .+-||.=....+.-. -+||-|- |.-|.||++|.|.
T Consensus 33 ~ItI~N~-~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGe-qP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINL-GEQAAKLETRHWIITDANGKTSEVQGAGVVGE-TPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEC-SSSCEEEEEEEEEEEETTSCEEEEEEESBTTB-CCEECTTEEEEEE
T ss_pred EEEEEeC-CCCCEEEEecEEEEEeCCCCEEEEEcCceEcC-CCcCCCCCceEEc
No 176
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=21.29 E-value=49 Score=24.50 Aligned_cols=25 Identities=12% Similarity=0.225 Sum_probs=21.6
Q ss_pred eEEEEECCCC-CCCcEEeecCCEEEE
Q 007890 61 KVVITINGRT-PGPTIQARQNDTVIV 85 (586)
Q Consensus 61 ~~~~~~Ng~~-pgP~i~v~~Gd~v~i 85 (586)
.-.+.+||.+ ++..-.++.||.|.|
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 4578999998 888889999999877
Done!