BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007896
(585 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus musculus GN=Pigt PE=1 SV=2
Length = 582
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/506 (31%), Positives = 246/506 (48%), Gaps = 68/506 (13%)
Query: 37 QGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFRVK 94
+G + EEL++ P P V A F F++R + H+ LFPKA+ QL+ K+ ++
Sbjct: 28 EGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLR 87
Query: 95 EMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLF 154
E+ LSFTQG WR WG P P G ELW F + VD WR L++ LSG+F
Sbjct: 88 ELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWRELSNVLSGIF 142
Query: 155 CASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPCRD 207
CAS+NF++++ T + P +FKP N LRY LPRE VCTENLTPW KLLPC
Sbjct: 143 CASLNFIDATNTVT-PTASFKPLGLANDTDDYFLRYAVLPREVVCTENLTPWKKLLPCSS 201
Query: 208 KAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTY 267
KAGLS L+ ++ YHSQ + + + L QTL+VV ++ TG+
Sbjct: 202 KAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFD--AFITGQG- 258
Query: 268 SVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFE 327
+ WS+ +F R + C +A S VY+ +
Sbjct: 259 ------KKDWSLFRMFSRTLTEACPLASQSLVYVDI------------------------ 288
Query: 328 SEGF-QSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVV 386
G+ Q N ++S P +++V K+ +V F ++S+ ++ L WK P
Sbjct: 289 -TGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPD 347
Query: 387 WSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPW 445
P LHA R++ G G ++G ++ L + P V + VVPW
Sbjct: 348 NEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFP------------VLLLDVVPW 395
Query: 446 YIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEF 505
Y+++Y HTL + + + I P++D+ P ++EM+++LP S + S++F
Sbjct: 396 YLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRQQPHLLEMLIQLPANSVTKV-SIQF 450
Query: 506 DKGFLHIDEYPPDANQGFDIPSALIS 531
++ L EY PD N GF + +++S
Sbjct: 451 ERALLKWTEYTPDPNHGFYVSPSVLS 476
>sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo sapiens GN=PIGT PE=1 SV=1
Length = 578
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 245/508 (48%), Gaps = 68/508 (13%)
Query: 35 LKQGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFR 92
L + + EEL++ P P V A F F++R + H+ LFPKA+ QL+ K+
Sbjct: 22 LAEPPRDSLREELVITPLPSGDVAATFQFRTRWDSELQREGVSHYRLFPKALGQLISKYS 81
Query: 93 VKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSG 152
++E+ LSFTQG WR WG P P G ELW F + VD W+ L++ LSG
Sbjct: 82 LRELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWKELSNVLSG 136
Query: 153 LFCASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPC 205
+FCAS+NF++S+ T + P +FKP N LRY LPRE VCTENLTPW KLLPC
Sbjct: 137 IFCASLNFIDSTNTVT-PTASFKPLGLANDTDHYFLRYAVLPREVVCTENLTPWKKLLPC 195
Query: 206 RDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGK 265
KAGLS L+ ++ YHSQ + + + L QTL+VV ++ TG+
Sbjct: 196 SSKAGLSVLLKADRLFHTSYHSQAVHIRPVCRNARCTSISWELRQTLSVVFD--AFITGQ 253
Query: 266 TYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANT 325
+ WS+ +F R + C +A S VY+ + T
Sbjct: 254 G-------KKDWSLFRMFSRTLTEPCPLASESRVYVDI--------------------TT 286
Query: 326 FESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYG-FSVEKYSDSQPFDLGLTWKIP 384
+ Q N ++ P +++V L + T IY ++S+ ++ L WK P
Sbjct: 287 YN----QDNETLEVHPPPTTTYQDVI-LGTRKTYAIYDLLDTAMINNSRNLNIQLKWKRP 341
Query: 385 VVWSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVV 443
P LHA R++ G G ++G ++ L T P V + V
Sbjct: 342 PENEAPPVPFLHAQRYVSGYGLQKGELSTLLYNTHPYRAFP------------VLLLDTV 389
Query: 444 PWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSL 503
PWY+++Y HTL + + + I P++D++ P ++EM+++LP S + S+
Sbjct: 390 PWYLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRLQPHLLEMLIQLPANSVTKV-SI 444
Query: 504 EFDKGFLHIDEYPPDANQGFDIPSALIS 531
+F++ L EY PD N GF + +++S
Sbjct: 445 QFERALLKWTEYTPDPNHGFYVSPSVLS 472
>sp|P38875|GPI16_YEAST GPI transamidase component GPI16 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GPI16 PE=1 SV=2
Length = 610
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 248/551 (45%), Gaps = 81/551 (14%)
Query: 18 LLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRA----PHSSSH 73
LL +F TVS G + + E L+LKP P+ +L F FQ ++ P SS
Sbjct: 13 LLLGVFAEDTVSQIG--INDSLWYPYDEALVLKPLPNNDLLLSFAFQLQSEPFDPAVSSM 70
Query: 74 G----RHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELW 129
H+ FP+AI L++ ++ L FT+G W WG P + A GVELW
Sbjct: 71 SYDAYEHYTTFPRAIPPLLESTATRQFHLRFTRGFWDALSWGQL-PHAGKEAGASGVELW 129
Query: 130 A---VFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGN------ 180
+ D Q+ + W+ L+++LSGLFC+S+NF++ S T + P ++ G
Sbjct: 130 SQVQAMDQEQAFHN--WKKLSNSLSGLFCSSLNFIDESRT-TFPRRSYASDIGAPLFNST 186
Query: 181 ----LRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSE 236
L +LP E +CTENLTP++KLLP R K+GL++L+D ++ ++S L + +
Sbjct: 187 EKLYLMRASLPNEPICTENLTPFIKLLPTRGKSGLTSLLDGHKLFDSLWNSISLDIATIC 246
Query: 237 SGSDEVDSGIGLDQTLTVVLQ-PSSWRTGKTYSVETNIQPSWSISSIFGRNIP----GKC 291
S ++ +D + +V PS+ G+ R IP G
Sbjct: 247 SEDEDALCHYEMDARIEMVTHVPSALARGE-------------------RPIPKPLDGNT 287
Query: 292 VIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDK----VF 347
+ + + + E + ++ A + +N +I D+ F
Sbjct: 288 LRCDTDKPFDSYQCFPLPEPSQTHFKLSQLFARPINNGNLFANRPTRICAEVDRSTWTAF 347
Query: 348 EEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGL----TWKI-PVVWSCQQAPLHASRFLMG 402
VD+ + + S ++ +D L T K+ P+V P+H SR L G
Sbjct: 348 LSVDDTIFSTHDNCFDLSNDQNEGGSGYDFILESTDTTKVTPIV----PVPIHVSRSLTG 403
Query: 403 SGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQP 462
+G +RG + I D +++ F+ +PW+++VY +LQ+ P
Sbjct: 404 NGQDRGGMRIVFHN-------------DNDTPVKLIYFESLPWFMRVYLSSLQITSTTSP 450
Query: 463 RAMAD--VVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDAN 520
+ + ++DK + + D+ PG +E + +P + + +FDK L EYPPDAN
Sbjct: 451 QLQENDIILDKYYLQ-AADRKRPGHLEFTMLIPANT-DIVMTYQFDKALLQFAEYPPDAN 508
Query: 521 QGFDIPSALIS 531
GF+I +A+I+
Sbjct: 509 HGFEIDAAVIT 519
>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=gpi16 PE=3 SV=1
Length = 545
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 243/521 (46%), Gaps = 76/521 (14%)
Query: 22 LFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLF- 80
L L+A S S+ E + E L +K F R F F+ A S+H
Sbjct: 7 LLLFAYSLLSFSLTAATIDETYDESLFIKSFSSRYSYVSFAFEIGASTDSTHSSVFSESS 66
Query: 81 ----PKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQ 136
P +IA+++ + +V E+ + T+GRW YE W P + + G E+WA
Sbjct: 67 FSLFPLSIARVMDECQVSELHIRATRGRWDYENWKE-SPDNGFYSGGLGFEVWAFMANDP 125
Query: 137 SLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSF---GNLRY-GTLPREAVC 192
S+ YW LT+ LSGL CAS+N+++SS TY P+L++ SF N +Y +LP+E VC
Sbjct: 126 SMK--YWLKLTNQLSGLLCASLNYIDSSNTYQ-PQLSYPGSFSFSNNTQYFASLPQEDVC 182
Query: 193 TENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGS-DEVDSGIGLDQT 251
TENL+P KLLPC+ KAG+++L+D + +HS + + SE+ S V GI +
Sbjct: 183 TENLSPLFKLLPCKRKAGIASLLDSHLFFDTDWHSFSIDVYPSENQSLASVKMGIIIQAV 242
Query: 252 LTVVLQPSSWRTGK-TYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGE 310
+ V + + R GK T+ + + S+ C+++ S + +D+
Sbjct: 243 VDV--ERNGRRKGKTTFQPPSEYCHDEDMDSL-------HCLMSGYSTEHHTVDD----L 289
Query: 311 LKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYS 370
+ +E +++TF S+ F SN DK+
Sbjct: 290 FHKVPKERC-LLSSTF-SDVFVSNG--------DKI------------------------ 315
Query: 371 DSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIID 430
D+ D +IP+ + + R L GN G+++ ++ SS P + +
Sbjct: 316 DTFSLDEAANIQIPIQSTSDNHTVTVDRSLSNDGNHWGSLSSTIYNPSSS---PRTIVY- 371
Query: 431 GRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMIL 490
F+ PW+++VY HTL + ++ D ++K+ P +D+ + +ME+
Sbjct: 372 ---------FEKFPWFVRVYLHTLTITLNGTRINTKDFIEKLYYQPLRDRKAGTMMEIQF 422
Query: 491 KLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALIS 531
+P + + +K L +DEYPPDAN+G+++P A+IS
Sbjct: 423 SIPPHT-NLIVHFNVEKTPLRLDEYPPDANRGYNLPPAIIS 462
>sp|Q9XWI6|EIF3B_CAEEL Eukaryotic translation initiation factor 3 subunit B
OS=Caenorhabditis elegans GN=eif-3.B PE=2 SV=1
Length = 725
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 310 ELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKY 369
E LERE + FESE F+ +++ E + TS + + E
Sbjct: 325 EKDKLEREQKINGISIFESEKFELYEGRPVNI------ENIKQFEWSPTSTVLAYYSE-C 377
Query: 370 SDSQPFDLGLTWKIPVVWSCQQAPLH----ASRFLMGSGNERGAIAISLEPTESSEGLPT 425
+D+ P + GL ++P + + A +H A F SG + + E E
Sbjct: 378 TDAVPAEFGLL-QVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEV 436
Query: 426 SHIIDGRCELRVDIFQV 442
++ G C+ VDIF++
Sbjct: 437 KYV--GGCQYHVDIFEI 451
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 89/251 (35%), Gaps = 48/251 (19%)
Query: 219 SIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWS 278
SI +HS R +S+E + + S V+ Q + W + ++V I P
Sbjct: 716 SIPEAQWHSSLARTSSAEYNVNNLVS--------PVLFQEALWHVPE-HAVVLEIAPHAL 766
Query: 279 ISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFK 338
+ ++ R + C I + +K R+N ++ G H
Sbjct: 767 LQAVLKRGLKPSCTI--------------IPLMKKDHRDNLEFFL-----AGIGRLHLSG 807
Query: 339 ISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASR 398
I P+ +F V+ + T +I S +D L W +P A
Sbjct: 808 IDANPNALFPPVEFPAPRGTPLI--------SPLIKWDHSLAWDVPA----------AED 849
Query: 399 FLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFV 458
F GSG+ AI +ES + H +DGR + + W K L + V
Sbjct: 850 FPNGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRVLFPATGYLSIVW--KTLARALGLGV 907
Query: 459 DKQPRAMADVV 469
++ P DVV
Sbjct: 908 EQLPVVFEDVV 918
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,601,900
Number of Sequences: 539616
Number of extensions: 9784852
Number of successful extensions: 20301
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20274
Number of HSP's gapped (non-prelim): 8
length of query: 585
length of database: 191,569,459
effective HSP length: 123
effective length of query: 462
effective length of database: 125,196,691
effective search space: 57840871242
effective search space used: 57840871242
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)