BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007903
(585 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From
Neisseria Gonorrhoeae
pdb|3B8G|A Chain A, Crysta Structure Of N-Acetylglutamate Synthase From
Neisseria Gonorrhoeae Complexed With Coenzyme A And
N-Acetyl-Glutamate
pdb|3D2P|A Chain A, Crystal Structure Of N-acetylglutamate Synthase From
Neisseria Gonorrhoeae Complexed With Coenzyme A And
L-arginine
pdb|3D2P|B Chain B, Crystal Structure Of N-acetylglutamate Synthase From
Neisseria Gonorrhoeae Complexed With Coenzyme A And
L-arginine
pdb|3D2M|A Chain A, Crystal Structure Of N-Acetylglutamate Synthase From
Neisseria Gonorrhoeae Complexed With Coenzyme A And
L-Glutamate
pdb|4I49|A Chain A, Structure Of Ngnags Bound With Bisubstrate Analog Coa-Nag
Length = 456
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 123/238 (51%), Gaps = 15/238 (6%)
Query: 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTH 140
+ FV FREA PY+ RG T V I G ++ L+ + DI L LGIR VL+ G +
Sbjct: 25 DSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAY 84
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGD 200
+D+L + +G Y R+TD SL A + AG +R EA L C G
Sbjct: 85 HFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAAL------C-----GS 133
Query: 201 SSRWHEV-GVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
S + V + SGNFL A+ GV+DG D G ++K D +R +LD G +V + L
Sbjct: 134 VSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPL 193
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICII--DGPILDESGHLIRFLTLQEADSL 315
G+S G+ N + + A + A++++A+KL+ + DG I G L L+ QEA SL
Sbjct: 194 GHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDG-ISRPDGTLAETLSAQEAQSL 250
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 524 ECRGQGQGDKLLGLCI 539
+ + G G++LL I
Sbjct: 382 QAQDGGYGERLLAHII 397
>pdb|2R98|A Chain A, Crystal Structure Of N-Acetylglutamate Synthase (Selenomet
Substituted) From Neisseria Gonorrhoeae
Length = 456
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 122/238 (51%), Gaps = 15/238 (6%)
Query: 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTH 140
+ FV FREA PY+ RG T V I G ++ L+ + DI L LGIR VL+ G +
Sbjct: 25 DSFVAHFREAAPYIRQXRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAY 84
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGD 200
+D+L + +G Y R+TD SL A + AG +R EA L C G
Sbjct: 85 HFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAAL------C-----GS 133
Query: 201 SSRWHEV-GVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
S + V + SGNFL A+ GV+DG D G ++K D +R +LD G +V L
Sbjct: 134 VSGFARAPSVPLVSGNFLTARPIGVIDGTDXEYAGVIRKTDTAALRFQLDAGNIVWXPPL 193
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICII--DGPILDESGHLIRFLTLQEADSL 315
G+S G+ N + + A + A++++A+KL+ + DG I G L L+ QEA SL
Sbjct: 194 GHSYGGKTFNLDXVQAAASVAVSLQAEKLVYLTLSDG-ISRPDGTLAETLSAQEAQSL 250
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 524 ECRGQGQGDKLLGLCI 539
+ + G G++LL I
Sbjct: 382 QAQDGGYGERLLAHII 397
>pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|B Chain B, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|C Chain C, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|D Chain D, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|E Chain E, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|F Chain F, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|G Chain G, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|H Chain H, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|I Chain I, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|J Chain J, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|K Chain K, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
pdb|2BUF|L Chain L, Arginine Feed-Back Inhibitable Acetylglutamate Kinase
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 25/247 (10%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTH 140
Q K EA PY+ G T V+ G + S L +D+ + +GI V+V G
Sbjct: 9 QVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGG 68
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHG 199
QI LL E+ ++ R+TD AA M+ + M++ +++ I N I RHG
Sbjct: 69 PQIGDLLKRLSIESHFIDGMRVTD----AATMDV---VEMVLGGQVNK--DIVNLINRHG 119
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDG 250
S+ +G++ + AK+ V + +D G GEV V+V + + G
Sbjct: 120 GSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKG 175
Query: 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTL 309
+ +++ +G S+GE N N VA A A++A+KL+ + + ++D+ G ++ L+
Sbjct: 176 DFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLST 235
Query: 310 QEADSLI 316
++ + LI
Sbjct: 236 EQVNELI 242
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445
G L ++ A + GV H++DG + +LLE+F G+GT++++
Sbjct: 250 GMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISN 296
>pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of
N-Acetylglutamate Synthase From Vibrio Parahaemolyticus
Length = 150
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%)
Query: 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P+
Sbjct: 4 EQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPY 63
Query: 509 FKEKCGEVAAIGVSPECRGQGQGDKLL 535
+E+ E A + + P+ R +G LL
Sbjct: 64 SEERKAEXACVAIHPDYRDGNRGLLLL 90
>pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
pdb|2BTY|B Chain B, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
pdb|2BTY|C Chain C, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 15/236 (6%)
Query: 84 VKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD-PILKDIAFLHHLGIRFVLVPGTHVQ 142
V EA PY+ G TFV+ G + ++DI L + GI+ ++V G
Sbjct: 6 VNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPA 65
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I +++ + G E + +R+TD +++ + M++ K++ + N+ HG +
Sbjct: 66 ISQMMKDLGIEPVFKNGHRVTDEKTMEI-------VEMVLVGKINK-EIVMNLNLHGGRA 117
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
VG+ + A+++ D G G+VKKV+ + ++ + +++ +G
Sbjct: 118 ----VGICGKDSKLIVAEKE--TKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIG 171
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
G N N A A ++ A+KLI + D + + G LI LT EA+ LIR
Sbjct: 172 EDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
>pdb|2RD5|A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate
Kinase By Pii In Arabidopsis Thaliana
pdb|2RD5|B Chain B, Structural Basis For The Regulation Of N-Acetylglutamate
Kinase By Pii In Arabidopsis Thaliana
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIR 132
T N + V+ E+ P++ RG T VV G ++SP L ++ D+ L +G+R
Sbjct: 11 TGNAPSPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLR 70
Query: 133 FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPI 192
+LV G I++ L + A++ R+TD A ME + M++ K++
Sbjct: 71 PILVHGGGPDINRYLKQLNIPAEFRDGLRVTD----ATTMEI---VSMVLVGKVNK---- 119
Query: 193 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252
N+ +++ VG+S G L A+ V + G GEV +VD + +R +D G
Sbjct: 120 -NLVSLINAAGATAVGLSGHDGRLLTARP--VPNSAQLGFVGEVARVDPSVLRPLVDYGY 176
Query: 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID 293
+ +++++ SG+ N N VA A A+ A+KLI + D
Sbjct: 177 IPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTD 217
>pdb|2JJ4|A Chain A, The Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc7942
pdb|2JJ4|B Chain B, The Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc7942
pdb|2JJ4|C Chain C, The Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc7942
pdb|2V5H|A Chain A, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
pdb|2V5H|B Chain B, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
pdb|2V5H|C Chain C, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
pdb|2V5H|D Chain D, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
pdb|2V5H|E Chain E, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
pdb|2V5H|F Chain F, Controlling The Storage Of Nitrogen As Arginine: The
Complex Of Pii And Acetylglutamate Kinase From
Synechococcus Elongatus Pcc 7942
Length = 321
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 24/244 (9%)
Query: 84 VKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQ 142
V+ EA PYL G T VV G + L + +++DI FL +G+R V+V G +
Sbjct: 34 VRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPE 93
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L G E ++ R+TD++++ + M++ +++ +I +++
Sbjct: 94 INAWLGRVGIEPQFHNGLRVTDADTMEV-------VEMVLVGRVNK-----DIVSRINTT 141
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
VG G + A+ D G GEV V+ + L+ G + ++S++
Sbjct: 142 GGRAVGFCGTDGRLVLARPH---DQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAAD 198
Query: 263 SSGEVLNCNTYEVATACALAIEADKLIC------IIDGPILDESGHLIRFLTLQEADSLI 316
+G+ N N VA A A+ A+KLI I++ P ES LI L + ++ LI
Sbjct: 199 ENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPES--LIPRLNIPQSRELI 256
Query: 317 RQRV 320
Q +
Sbjct: 257 AQGI 260
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 278 QGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGY 313
>pdb|3ZZF|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase
Complexed With Its Substrate N-Acetylglutamate
pdb|3ZZF|B Chain B, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase
Complexed With Its Substrate N-Acetylglutamate
pdb|3ZZF|C Chain C, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase
Complexed With Its Substrate N-Acetylglutamate
pdb|3ZZF|D Chain D, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase
Complexed With Its Substrate N-Acetylglutamate
pdb|3ZZG|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase Without
Ligands
pdb|3ZZG|B Chain B, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase Without
Ligands
pdb|3ZZG|C Chain C, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase Without
Ligands
pdb|3ZZG|D Chain D, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase Without
Ligands
pdb|3ZZH|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase In
Complex With Its Feed-Back Inhibitor L-Arginine
pdb|3ZZH|B Chain B, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase In
Complex With Its Feed-Back Inhibitor L-Arginine
pdb|3ZZH|C Chain C, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase In
Complex With Its Feed-Back Inhibitor L-Arginine
pdb|3ZZH|D Chain D, Crystal Structure Of The Amino Acid Kinase Domain From
Saccharomyces Cerevisiae Acetylglutamate Kinase In
Complex With Its Feed-Back Inhibitor L-Arginine
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
E EQ++K+F +A V+ + G I+S L + +AFL+H+G+ +++ G
Sbjct: 34 EVEQYLKYFTSVSQQQFA------VIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHG 86
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
T Q++ L +G E Y+ RITD ++A + +E L + + +
Sbjct: 87 TGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVR------KCFLEQNLK---LVTALEQL 137
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
G +R + SG F A +D Y G +K V + + G L IL++
Sbjct: 138 GVRAR------PITSGVFTA----DYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTS 187
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIID--GPILDESGHLIRFLTL-QEADSL 315
L ++SG++LN N A A E K++ + + G I +G I + L +E D L
Sbjct: 188 LAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDL 247
Query: 316 IRQ 318
++Q
Sbjct: 248 MKQ 250
>pdb|3ZZI|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|B Chain B, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|C Chain C, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|D Chain D, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|E Chain E, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|F Chain F, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|G Chain G, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|3ZZI|H Chain H, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae
pdb|4AB7|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|B Chain B, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|C Chain C, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|D Chain D, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|E Chain E, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|F Chain F, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|G Chain G, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
pdb|4AB7|H Chain H, Crystal Structure Of A Tetrameric Acetylglutamate Kinase
From Saccharomyces Cerevisiae Complexed With Its
Substrate N-Acetylglutamate
Length = 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 29/243 (11%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
E EQ++K+F F VI G + S L + +AFL+H+G+ +++ G
Sbjct: 34 EVEQYLKYFTSV-------SQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHG 86
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
T Q++ L +G E Y+ RITD ++A + +E L + + +
Sbjct: 87 TGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVR------KCFLEQNLK---LVTALEQL 137
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
G +R + SG F A +D Y G +K V + + G L IL++
Sbjct: 138 GVRAR------PITSGVFTA----DYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTS 187
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIID--GPILDESGHLIRFLTL-QEADSL 315
L ++SG++LN N A A E K++ + + G I +G I + L +E D L
Sbjct: 188 LAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDL 247
Query: 316 IRQ 318
++Q
Sbjct: 248 MKQ 250
>pdb|3S6K|A Chain A, Crystal Structure Of Xcnags
Length = 467
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
E Q++K F + L A R F V+ G V L+ + ++FL +G+ +++ G
Sbjct: 47 EISQYLKRFSQ----LDAKR---FAVVKVGGAVLRDDLEALTSSLSFLQEVGLTPIVLHG 99
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM-MIEAKLSPGPPICNIRR 197
Q+D LS G E + + R+T +LA + + ++EA +++
Sbjct: 100 AGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVEA----------LQQ 149
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
+G + S+ G F A ++ YG GEVK V++ + L G + +++
Sbjct: 150 NGARA------TSITGGVFEAE----YLNRDTYGLVGEVKAVNLAPIEASLQAGSIPVIT 199
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILDESGHLIRFLTLQ-EADSL 315
+LG + SG++LN N A ++ K+I + G +LD G LI + L E D L
Sbjct: 200 SLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHL 259
Query: 316 IRQ-------RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSER 362
+Q RVK +I + E ++ +D +++ + T R
Sbjct: 260 XQQPWINGGXRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKGSGTLVRR 313
>pdb|2AP9|A Chain A, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
pdb|2AP9|B Chain B, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
pdb|2AP9|C Chain C, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
pdb|2AP9|D Chain D, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
pdb|2AP9|E Chain E, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
pdb|2AP9|F Chain F, Crystal Structure Of Acetylglutamate Kinase From
Mycobacterium Tuberculosis Cdc1551
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLD-PILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P+L G VV G + L D AFL + GI V+V G QI L
Sbjct: 15 EALPWLKQLHGKVVVVKYGGNAXTDDTLRRAFAADXAFLRNCGIHPVVVHGGGPQITAXL 74
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
G E + G +R+T E L A R ++ ++ G + N I HG +
Sbjct: 75 RRLGIEGDFKGGFRVTTPEVLDVA-------RXVLFGQV--GRELVNLINAHGP----YA 121
Query: 207 VGVSVASGNFLAAKRKGV-VDGV--DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
VG++ A R+ V VDGV D G G+V +V+ + + G + ++S L +
Sbjct: 122 VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAXLDLVAAGRIPVVSTLAPDA 181
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIID 293
G V N N A A A A+ A+KL+ + D
Sbjct: 182 DGVVHNINADTAAAAVAEALGAEKLLXLTD 211
>pdb|3L86|A Chain A, The Crystal Structure Of Smu.665 From Streptococcus Mutans
Ua159
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 21/233 (9%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
+VI G + S L I G + V+V G I+KL+ E K + R
Sbjct: 38 IIVIKIGGVASQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLR 97
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVS-VASGNFLAAK 220
+T + + A + ++ L +R+ G S + + + V + ++L
Sbjct: 98 VTSKDDMVLVSHA---LLDLVGKNLQE-----KLRQAGVSCQQLKSDIKHVVAADYL--- 146
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
D YG G+V ++ + E L+ + IL++LGYS G++LN N +ATA A
Sbjct: 147 -----DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVA 201
Query: 281 LAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAV 333
+A+ ADKLI + + + E+G ++ +T + +++++ + I A + +
Sbjct: 202 VALAADKLILMTNVKGVLENGAVLEKITSHQ----VQEKIDTAVITAGMIPKI 250
>pdb|3U6U|A Chain A, Crystal Structure Of The Putative Acetylglutamate Kinase
From Thermus Thermophilus
pdb|3U6U|C Chain C, Crystal Structure Of The Putative Acetylglutamate Kinase
From Thermus Thermophilus
Length = 269
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 117 DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR-----YRITDSESLAAA 171
+ + KD A L G++ +LV G + +K+ GH ++L R+TD ++L
Sbjct: 15 EAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPGGQVSRLTDRKTLE-- 72
Query: 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231
I M+ L + +++ G ++ +G+S G +RK V V+ G
Sbjct: 73 ------IFEMVYCGLVNKRLVELLQKEGANA----IGLSGLDGRLFVGRRKTAVKYVENG 122
Query: 232 A--------TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAI 283
TG V++V+ + L G L +L+ S E +N + ++A A
Sbjct: 123 KVKVHRGDYTGTVEEVNKALLDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLY 182
Query: 284 EADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
A+ L+ + + P G L R+ + SL+R+
Sbjct: 183 GAEALVYLSNVP-----GLLARY---PDEASLVRE 209
>pdb|3S6H|A Chain A, Crystal Structure Of Native MmnagsK
pdb|3S6H|B Chain B, Crystal Structure Of Native MmnagsK
pdb|3S6H|X Chain X, Crystal Structure Of Native MmnagsK
pdb|3S6H|Y Chain Y, Crystal Structure Of Native MmnagsK
Length = 460
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
F VI G V L + +AFL +G+ V+V G Q+D L + + R
Sbjct: 60 FAVIKVGGAVIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLR 119
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
+T E++ + + +A L+ + IR G + +V G F A
Sbjct: 120 VTRDEAIPIIRDT------LTQANLAL---VDAIRDAGGRA------AAVPRGVFEA--- 161
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACAL 281
+VD G GE + + + + G IL+ LG + G ++N N A
Sbjct: 162 -DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVH 220
Query: 282 AIEADKLICII-DGPILDESGHLIRFLTL 309
A++ K++ + G +LDE G ++ + L
Sbjct: 221 ALQPYKVVFLTGTGGLLDEDGDILSSINL 249
>pdb|3S7Y|A Chain A, Crystal Structure Of Mmnags In Space Group P3121 At 4.3 A
Resolution
pdb|3S7Y|X Chain X, Crystal Structure Of Mmnags In Space Group P3121 At 4.3 A
Resolution
Length = 461
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
F VI G V L + +AFL +G+ V+V G Q+D L + + R
Sbjct: 60 FAVIKVGGAVIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLR 119
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
+T E++ + + +A L+ + IR G + +V G F A
Sbjct: 120 VTRDEAIPIIRDT------LTQANLAL---VDAIRDAGGRA------AAVPRGVFEA--- 161
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACAL 281
+VD G GE + + + + G IL+ LG + G ++N N A
Sbjct: 162 -DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVH 220
Query: 282 AIEADKLICII-DGPILDESGHLIRFLTL 309
A++ K++ + G +LDE G ++ + L
Sbjct: 221 ALQPYKVVFLTGTGGLLDEDGDILSSINL 249
>pdb|3S6G|A Chain A, Crystal Structures Of Seleno-Substituted Mutant Mmnags In
Space Group P212121
pdb|3S6G|B Chain B, Crystal Structures Of Seleno-Substituted Mutant Mmnags In
Space Group P212121
pdb|3S6G|X Chain X, Crystal Structures Of Seleno-Substituted Mutant Mmnags In
Space Group P212121
pdb|3S6G|Y Chain Y, Crystal Structures Of Seleno-Substituted Mutant Mmnags In
Space Group P212121
Length = 460
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
F VI G V L + +AFL +G+ V+V G Q+D L + + R
Sbjct: 60 FAVIKVGGAVIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLR 119
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
+T E+ + + +A L+ + IR G + +V G F A
Sbjct: 120 VTRDEAXPIIRD------TLTQANLAL---VDAIRDAGGRA------AAVPRGVFEA--- 161
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACAL 281
+VD G GE + + + + G IL+ LG + G ++N N A
Sbjct: 162 -DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVH 220
Query: 282 AIEADKLICII-DGPILDESGHLIRFLTL 309
A++ K++ + G +LDE G ++ + L
Sbjct: 221 ALQPYKVVFLTGTGGLLDEDGDILSSINL 249
>pdb|2GAN|A Chain A, Crystal Structure Of A Putative Acetyltransferase From
Pyrococcus Horikoshii, Northeast Structural Genomics
Target Jr32.
pdb|2GAN|B Chain B, Crystal Structure Of A Putative Acetyltransferase From
Pyrococcus Horikoshii, Northeast Structural Genomics
Target Jr32
Length = 190
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 25/134 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF----- 506
R D +G +++ +P ++ L + D Y +++ +II AL
Sbjct: 40 RKPNPNDFNGFREVYEPFLKF---------RLSQEFDELYTYQKDNRIIGTIALVYKRIK 90
Query: 507 ---------PFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
EK G + V PE +G+G G LL + L S + ++ T FP
Sbjct: 91 EKGIWWVPEELXNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVT--FP 148
Query: 558 FLRGRTHSYYRLKF 571
L ++ Y + F
Sbjct: 149 NLEAYSYYYXKKGF 162
>pdb|1GS5|A Chain A, N-Acetyl-L-Glutamate Kinase From Escherichia Coli
Complexed With Its Substrate N-Acetylglutamate And Its
Substrate Analog Amppnp
pdb|1OH9|A Chain A, Acetylglutamate Kinase From Escherichia Coli Complexed
With Mgadp, N-Acetyl-L-Glutamate And The
Transition-State Mimic Alf4-
pdb|1OHA|A Chain A, Acetylglutamate Kinase From Escherichia Coli Complexed
With Mgadp And N-Acetyl-L-Glutamate
pdb|1OHB|A Chain A, Acetylglutamate Kinase From Escherichia Coli Complexed
With Adp And Sulphate
pdb|2WXB|A Chain A, Acetylglutamate Kinase From Escherichia Coli Free Of
Substrates
pdb|2WXB|B Chain B, Acetylglutamate Kinase From Escherichia Coli Free Of
Substrates
pdb|2X2W|A Chain A, Acetylglutamate Kinase From Escherichia Coli Bound To N-
Acetyl-L-Glutamyl-5-Phosphate
pdb|2X2W|B Chain B, Acetylglutamate Kinase From Escherichia Coli Bound To N-
Acetyl-L-Glutamyl-5-Phosphate
Length = 258
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFL 307
L+ G L ++S++G + G+++N N + ATA A + AD ++ ILD G I +
Sbjct: 137 LENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEM 196
Query: 308 TLQEADSLIRQRVKQSEIAANYVKAVAEE-------DITCFGHSDSIGSVYSSQNGKTFS 360
T +A+ LI Q + + A+ DI + H++ + +++ NG
Sbjct: 197 TAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALF---NGMPMG 253
Query: 361 ERRIA 365
R +A
Sbjct: 254 TRILA 258
>pdb|3T7B|A Chain A, Crystal Structure Of N-Acetyl-L-Glutamate Kinase From
Yersinia Pestis
pdb|3T7B|B Chain B, Crystal Structure Of N-Acetyl-L-Glutamate Kinase From
Yersinia Pestis
Length = 260
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 205 HEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS 264
+ VG+ +A GN + ++D + G G+ + ++ L G I+S++G +
Sbjct: 100 NAVGLCLADGNTVTVT---LLDA-ELGHVGKAQPGSAALVQTLLAAGYXPIISSIGITVE 155
Query: 265 GEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ------ 318
G++ N N + ATA A + AD ++ ILD G I T Q+A+ LI Q
Sbjct: 156 GQLXNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEXTAQKAEQLIAQGIITDG 215
Query: 319 RVKQSEIAANYVKAVAEE-DITCFGHSDSIGSVYSSQNGKTFSER 362
V + A + +++ DI + HS+ + +++ NG R
Sbjct: 216 XVVKVNAALDAARSLGRPVDIASWRHSEQLPALF---NGVPIGTR 257
>pdb|2OZG|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase
(Yp_325469.1) From Anabaena Variabilis Atcc 29413 At
2.00 A Resolution
Length = 396
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 487 LDSFYVVEREGQIIACAALFPFFKEKCGE------VAAIGVSPECRGQGQGDKLL 535
L++F V+ RE ++ A+ P + G+ +AA+G++PE RG G L+
Sbjct: 47 LENFRVIYREQKVAGGLAILPXGQWWGGQRVPXAGIAAVGIAPEYRGDGAAIALI 101
>pdb|1ZNW|A Chain A, Crystal Structure Of Unliganded Form Of Mycobacterium
Tuberculosis Guanylate Kinase
pdb|1ZNX|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Guanylate
Kinase In Complex With Gmp
pdb|1ZNY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Guanylate
Kinase In Complex With Gdp
pdb|1ZNZ|A Chain A, Crystal Structure Of The Reduced Form Of Mycobacterium
Tuberculosis Guanylate Kinase In Complex With Gdp
Length = 207
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 219 AKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL--GYSSSGEVLNCNTYEVA 276
A R G VDGVDY +D TR ++ +D G L+ + + G SG + A
Sbjct: 57 APRPGEVDGVDY------HFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAA 110
Query: 277 TACALAIEAD 286
T + IE D
Sbjct: 111 TGVPVLIEVD 120
>pdb|1S4Q|A Chain A, Crystal Structure Of Guanylate Kinase From Mycobacterium
Tuberculosis (Rv1389)
Length = 228
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 219 AKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL--GYSSSGEVLNCNTYEVA 276
A R G VDGVDY +D TR ++ +D G L+ + + G SG + A
Sbjct: 60 APRPGEVDGVDY------HFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAA 113
Query: 277 TACALAIEAD 286
T + IE D
Sbjct: 114 TGVPVLIEVD 123
>pdb|3LOD|A Chain A, The Crystal Structure Of The Putative Acyl-Coa
N-Acyltransferase From Klebsiella Pneumoniae
Subsp.Pneumoniae Mgh 78578
Length = 162
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 496 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLG 536
+G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 58 QGEAVGCGAIV-LSEEGFGEMKRVYIDPQHRGQQLGEKLLA 97
>pdb|1GSJ|A Chain A, Selenomethionine Substituted N-Acetyl-L-Glutamate Kinase
From Escherichia Coli Complexed With Its Substrate N-
Acetyl-L-Glutamate And Its Substrate Analog Amppnp
Length = 258
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFL 307
L+ G L ++S++G + G++ N N + ATA A + AD ++ ILD G I
Sbjct: 137 LENGYLPVVSSIGVTDEGQLXNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEX 196
Query: 308 TLQEADSLIRQRV 320
T +A+ LI Q +
Sbjct: 197 TAAKAEQLIEQGI 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,084,767
Number of Sequences: 62578
Number of extensions: 706278
Number of successful extensions: 1722
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1684
Number of HSP's gapped (non-prelim): 33
length of query: 585
length of database: 14,973,337
effective HSP length: 104
effective length of query: 481
effective length of database: 8,465,225
effective search space: 4071773225
effective search space used: 4071773225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)