Query 007904
Match_columns 585
No_of_seqs 188 out of 1365
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 13:22:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007904.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007904hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 4E-205 1E-209 1648.8 46.3 538 46-585 3-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 4E-204 1E-208 1645.2 44.8 539 45-584 4-545 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 3E-204 9E-209 1650.4 43.6 538 45-584 38-577 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-121 5E-126 979.6 30.8 380 126-576 58-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 4E-113 1E-117 905.4 18.1 361 115-556 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-107 4E-112 862.1 23.3 354 115-553 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 8.5E-87 2.9E-91 714.5 25.6 385 115-581 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 2.6E-08 8.8E-13 107.1 16.1 168 247-453 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 1.2E-08 4E-13 109.8 11.1 130 292-455 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.4 6.5E-07 2.2E-11 94.8 10.8 218 160-443 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.9 6.3E-05 2.2E-09 81.5 12.1 128 292-453 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.8 5.9E-05 2E-09 82.3 10.1 132 292-456 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.3 0.00082 2.8E-08 70.3 10.4 225 160-442 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.1 0.00063 2.2E-08 72.7 6.7 110 322-449 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 96.6 0.0022 7.5E-08 68.0 6.5 104 323-443 182-305 (381)
16 3d4o_A Dipicolinate synthase s 96.5 0.016 5.6E-07 58.0 11.7 122 303-453 133-255 (293)
17 3r3j_A Glutamate dehydrogenase 96.5 0.14 4.9E-06 55.5 19.5 190 247-455 145-368 (456)
18 3k92_A NAD-GDH, NAD-specific g 96.5 0.026 8.9E-07 60.7 13.7 178 247-443 126-329 (424)
19 3aoe_E Glutamate dehydrogenase 96.3 0.034 1.1E-06 59.7 13.1 186 247-455 123-332 (419)
20 1a4i_A Methylenetetrahydrofola 96.3 0.0086 2.9E-07 61.8 8.2 96 303-442 143-239 (301)
21 4fcc_A Glutamate dehydrogenase 96.1 0.18 6E-06 54.7 17.6 182 247-443 141-354 (450)
22 3l07_A Bifunctional protein fo 96.1 0.013 4.6E-07 59.9 8.5 94 303-440 139-233 (285)
23 3p2o_A Bifunctional protein fo 95.8 0.021 7.1E-07 58.5 8.6 93 304-440 139-232 (285)
24 3jyo_A Quinate/shikimate dehyd 95.8 0.02 6.9E-07 57.9 8.1 88 309-416 111-205 (283)
25 3ngx_A Bifunctional protein fo 95.7 0.021 7.2E-07 58.2 8.1 83 303-425 130-213 (276)
26 1b0a_A Protein (fold bifunctio 95.7 0.018 6.2E-07 59.0 7.6 96 303-442 137-233 (288)
27 2bma_A Glutamate dehydrogenase 95.7 0.14 4.9E-06 55.7 14.9 179 248-443 159-372 (470)
28 4a5o_A Bifunctional protein fo 95.6 0.027 9.1E-07 57.7 8.3 97 303-443 139-237 (286)
29 1edz_A 5,10-methylenetetrahydr 95.5 0.028 9.6E-07 58.3 7.9 114 306-443 149-278 (320)
30 2yfq_A Padgh, NAD-GDH, NAD-spe 95.4 0.14 4.7E-06 55.0 13.3 177 248-443 117-326 (421)
31 4a26_A Putative C-1-tetrahydro 95.4 0.031 1.1E-06 57.6 7.8 96 301-440 141-239 (300)
32 3aog_A Glutamate dehydrogenase 95.4 0.28 9.6E-06 53.0 15.5 178 247-443 140-344 (440)
33 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.01 3.4E-07 52.8 3.0 71 325-416 21-91 (144)
34 3tri_A Pyrroline-5-carboxylate 95.2 0.11 3.7E-06 51.9 10.8 106 325-457 3-110 (280)
35 3don_A Shikimate dehydrogenase 95.1 0.022 7.7E-07 57.5 5.7 86 309-416 101-186 (277)
36 1v8b_A Adenosylhomocysteinase; 94.8 0.12 4.1E-06 56.4 10.9 123 300-455 235-357 (479)
37 2c2x_A Methylenetetrahydrofola 94.8 0.06 2E-06 55.0 7.8 98 303-442 136-234 (281)
38 4e12_A Diketoreductase; oxidor 94.8 0.16 5.4E-06 50.5 10.7 98 326-445 5-124 (283)
39 1gpj_A Glutamyl-tRNA reductase 94.7 0.19 6.3E-06 52.9 11.7 102 322-443 164-269 (404)
40 2egg_A AROE, shikimate 5-dehyd 94.5 0.039 1.3E-06 55.9 5.6 87 310-416 125-215 (297)
41 1v9l_A Glutamate dehydrogenase 94.4 0.34 1.2E-05 52.0 13.1 177 248-443 116-325 (421)
42 1c1d_A L-phenylalanine dehydro 94.4 0.18 6.2E-06 52.9 10.8 167 249-447 92-269 (355)
43 3u62_A Shikimate dehydrogenase 94.3 0.06 2.1E-06 53.5 6.5 144 256-440 42-200 (253)
44 2rir_A Dipicolinate synthase, 94.2 0.15 5.1E-06 51.1 9.3 100 316-441 148-247 (300)
45 2o4c_A Erythronate-4-phosphate 93.8 0.7 2.4E-05 48.8 13.6 117 293-441 81-208 (380)
46 1pjc_A Protein (L-alanine dehy 93.5 0.14 4.8E-06 53.0 7.8 96 323-442 165-269 (361)
47 1bgv_A Glutamate dehydrogenase 93.5 1.5 5.2E-05 47.4 16.0 178 249-443 137-350 (449)
48 2ewd_A Lactate dehydrogenase,; 93.4 0.15 5.2E-06 51.5 7.5 101 326-444 5-125 (317)
49 3fbt_A Chorismate mutase and s 93.3 0.12 4.1E-06 52.5 6.6 49 310-369 107-155 (282)
50 1hyh_A L-hicdh, L-2-hydroxyiso 93.3 0.11 3.7E-06 52.3 6.3 102 326-444 2-126 (309)
51 1pzg_A LDH, lactate dehydrogen 93.2 0.14 4.9E-06 52.5 7.2 106 326-445 10-137 (331)
52 2dpo_A L-gulonate 3-dehydrogen 93.2 0.2 7E-06 51.3 8.3 123 325-473 6-151 (319)
53 1mld_A Malate dehydrogenase; o 93.2 0.29 9.9E-06 49.9 9.3 101 327-443 2-120 (314)
54 3d64_A Adenosylhomocysteinase; 93.2 0.3 1E-05 53.4 9.9 99 317-443 269-367 (494)
55 3o8q_A Shikimate 5-dehydrogena 93.1 0.13 4.4E-06 52.0 6.6 97 256-369 50-159 (281)
56 3tnl_A Shikimate dehydrogenase 93.1 0.15 5E-06 52.6 7.0 50 309-369 138-187 (315)
57 2hk9_A Shikimate dehydrogenase 93.1 0.23 7.8E-06 49.3 8.2 84 310-416 114-197 (275)
58 3u95_A Glycoside hydrolase, fa 93.1 0.16 5.4E-06 55.1 7.6 23 421-443 140-162 (477)
59 3t4e_A Quinate/shikimate dehyd 93.1 0.14 4.8E-06 52.6 6.9 49 310-369 133-181 (312)
60 2ekl_A D-3-phosphoglycerate de 93.1 0.91 3.1E-05 46.2 12.8 121 292-441 90-233 (313)
61 2tmg_A Protein (glutamate dehy 93.0 1.9 6.5E-05 46.1 15.6 178 248-443 115-319 (415)
62 3pwz_A Shikimate dehydrogenase 92.8 0.14 4.7E-06 51.6 6.2 99 256-369 44-153 (272)
63 3tum_A Shikimate dehydrogenase 92.7 0.18 6.2E-06 50.7 6.9 48 310-368 110-157 (269)
64 1ldn_A L-lactate dehydrogenase 92.7 0.16 5.6E-06 51.7 6.6 105 326-443 7-126 (316)
65 3mw9_A GDH 1, glutamate dehydr 92.4 0.59 2E-05 51.3 10.9 179 247-443 136-352 (501)
66 3oet_A Erythronate-4-phosphate 92.4 0.94 3.2E-05 48.0 12.2 119 293-443 84-213 (381)
67 3ce6_A Adenosylhomocysteinase; 92.3 0.99 3.4E-05 49.3 12.5 108 317-455 266-374 (494)
68 3dtt_A NADP oxidoreductase; st 92.2 0.32 1.1E-05 47.2 7.8 109 319-443 13-127 (245)
69 1leh_A Leucine dehydrogenase; 92.1 0.35 1.2E-05 50.8 8.3 159 253-443 93-264 (364)
70 2v6b_A L-LDH, L-lactate dehydr 92.1 0.059 2E-06 54.6 2.4 123 327-466 2-139 (304)
71 2eez_A Alanine dehydrogenase; 91.9 0.5 1.7E-05 48.9 9.2 97 322-442 163-268 (369)
72 1a5z_A L-lactate dehydrogenase 91.8 0.39 1.3E-05 48.8 8.1 99 327-445 2-121 (319)
73 2hjr_A Malate dehydrogenase; m 91.8 0.14 4.7E-06 52.6 4.8 127 326-470 15-160 (328)
74 1zud_1 Adenylyltransferase THI 91.7 0.18 6E-06 49.8 5.3 37 322-369 25-61 (251)
75 2i6t_A Ubiquitin-conjugating e 91.6 0.37 1.2E-05 49.1 7.7 101 326-444 15-129 (303)
76 1x7d_A Ornithine cyclodeaminas 91.6 0.29 9.9E-06 50.8 7.1 114 310-451 116-238 (350)
77 2dbq_A Glyoxylate reductase; D 91.6 2.3 7.7E-05 43.6 13.6 121 292-441 89-241 (334)
78 1p77_A Shikimate 5-dehydrogena 91.6 0.22 7.5E-06 49.4 5.9 49 309-369 103-151 (272)
79 3fef_A Putative glucosidase LP 91.5 0.25 8.6E-06 53.3 6.7 105 324-443 4-149 (450)
80 2d5c_A AROE, shikimate 5-dehyd 91.5 0.31 1.1E-05 47.7 6.8 81 310-416 102-182 (263)
81 1b8p_A Protein (malate dehydro 91.4 0.15 5.1E-06 52.2 4.6 111 326-443 6-136 (329)
82 1t2d_A LDH-P, L-lactate dehydr 91.3 0.2 7E-06 51.2 5.5 101 326-445 5-131 (322)
83 2gcg_A Glyoxylate reductase/hy 91.3 1.7 5.8E-05 44.4 12.3 140 273-441 80-247 (330)
84 1nyt_A Shikimate 5-dehydrogena 91.1 0.36 1.2E-05 47.8 6.9 49 309-369 103-151 (271)
85 3h5n_A MCCB protein; ubiquitin 90.9 0.65 2.2E-05 48.2 8.9 38 321-369 114-151 (353)
86 1o6z_A MDH, malate dehydrogena 90.8 0.18 6.1E-06 51.0 4.4 103 327-443 2-122 (303)
87 2zqz_A L-LDH, L-lactate dehydr 90.7 0.21 7.3E-06 51.3 5.0 106 325-443 9-128 (326)
88 4g2n_A D-isomer specific 2-hyd 90.7 1.7 5.8E-05 45.2 11.8 189 292-521 116-335 (345)
89 1obb_A Maltase, alpha-glucosid 90.6 0.19 6.5E-06 54.7 4.7 124 325-466 3-174 (480)
90 3d1l_A Putative NADP oxidoredu 90.5 0.25 8.4E-06 48.0 5.0 100 321-444 6-106 (266)
91 1ez4_A Lactate dehydrogenase; 90.5 0.26 8.9E-06 50.5 5.3 105 326-443 6-124 (318)
92 1gtm_A Glutamate dehydrogenase 90.4 2.2 7.4E-05 45.6 12.6 114 248-373 115-250 (419)
93 2g1u_A Hypothetical protein TM 90.2 0.51 1.8E-05 42.2 6.5 37 321-369 15-51 (155)
94 1lu9_A Methylene tetrahydromet 90.2 1.2 4.1E-05 44.1 9.7 83 273-369 62-152 (287)
95 1y6j_A L-lactate dehydrogenase 90.0 0.37 1.3E-05 49.2 6.1 100 326-443 8-126 (318)
96 2i99_A MU-crystallin homolog; 90.0 0.85 2.9E-05 46.1 8.6 113 310-450 122-237 (312)
97 3rui_A Ubiquitin-like modifier 90.0 0.27 9.1E-06 51.4 5.0 37 322-369 31-67 (340)
98 3d0o_A L-LDH 1, L-lactate dehy 90.0 0.34 1.2E-05 49.4 5.7 107 324-443 5-126 (317)
99 1omo_A Alanine dehydrogenase; 89.9 0.99 3.4E-05 46.0 9.1 112 310-451 112-229 (322)
100 1guz_A Malate dehydrogenase; o 89.9 0.65 2.2E-05 46.9 7.7 100 327-443 2-121 (310)
101 1wwk_A Phosphoglycerate dehydr 89.8 1.9 6.4E-05 43.8 11.0 108 304-441 103-233 (307)
102 3vku_A L-LDH, L-lactate dehydr 89.6 0.35 1.2E-05 50.0 5.5 106 325-443 9-128 (326)
103 1s6y_A 6-phospho-beta-glucosid 89.4 0.22 7.5E-06 53.7 3.9 127 326-466 8-175 (450)
104 1lld_A L-lactate dehydrogenase 89.4 0.27 9.3E-06 49.0 4.4 103 325-444 7-128 (319)
105 1smk_A Malate dehydrogenase, g 89.2 0.5 1.7E-05 48.3 6.2 104 326-443 9-128 (326)
106 3hdj_A Probable ornithine cycl 89.0 2.2 7.4E-05 43.6 10.8 101 324-453 120-227 (313)
107 1xdw_A NAD+-dependent (R)-2-hy 88.9 2.9 0.0001 42.8 11.8 137 273-441 73-235 (331)
108 2rcy_A Pyrroline carboxylate r 88.9 2 6.8E-05 41.2 9.9 92 325-444 4-95 (262)
109 3k5p_A D-3-phosphoglycerate de 88.9 4.4 0.00015 43.3 13.5 192 291-521 101-321 (416)
110 3jtm_A Formate dehydrogenase, 88.8 2.7 9.4E-05 43.7 11.6 174 292-496 108-309 (351)
111 2j6i_A Formate dehydrogenase; 88.8 1.8 6.1E-05 45.1 10.2 145 272-442 87-259 (364)
112 3ba1_A HPPR, hydroxyphenylpyru 88.8 2.2 7.4E-05 44.0 10.7 107 304-442 124-253 (333)
113 2zyd_A 6-phosphogluconate dehy 88.8 0.82 2.8E-05 49.3 7.9 102 322-443 12-116 (480)
114 3h8v_A Ubiquitin-like modifier 88.7 0.47 1.6E-05 48.4 5.6 38 321-369 32-69 (292)
115 1oju_A MDH, malate dehydrogena 88.7 0.35 1.2E-05 49.1 4.7 104 327-443 2-121 (294)
116 1z82_A Glycerol-3-phosphate de 88.7 0.49 1.7E-05 47.7 5.8 98 325-445 14-116 (335)
117 3evt_A Phosphoglycerate dehydr 88.6 1.5 5E-05 45.2 9.3 188 292-521 83-300 (324)
118 2vhw_A Alanine dehydrogenase; 88.5 1 3.5E-05 46.9 8.1 95 322-440 165-268 (377)
119 2hmt_A YUAA protein; RCK, KTN, 88.3 0.33 1.1E-05 41.6 3.5 103 323-443 4-108 (144)
120 4e21_A 6-phosphogluconate dehy 88.1 1.6 5.3E-05 45.4 9.2 96 323-443 20-118 (358)
121 1qp8_A Formate dehydrogenase; 88.0 5.2 0.00018 40.5 12.8 118 291-441 70-211 (303)
122 4hy3_A Phosphoglycerate oxidor 88.0 1.8 6E-05 45.5 9.6 179 303-522 133-339 (365)
123 2d0i_A Dehydrogenase; structur 88.0 2.6 8.8E-05 43.2 10.6 91 321-441 142-236 (333)
124 2cuk_A Glycerate dehydrogenase 87.9 3.9 0.00013 41.5 11.9 117 292-442 87-231 (311)
125 4gsl_A Ubiquitin-like modifier 87.8 0.48 1.6E-05 53.2 5.4 38 322-370 323-360 (615)
126 2xxj_A L-LDH, L-lactate dehydr 87.7 0.27 9.2E-06 50.1 3.1 100 326-443 1-119 (310)
127 1u8x_X Maltose-6'-phosphate gl 87.7 0.29 1E-05 53.1 3.5 126 325-466 28-194 (472)
128 3gvi_A Malate dehydrogenase; N 87.6 0.78 2.7E-05 47.3 6.5 106 323-443 5-127 (324)
129 1ur5_A Malate dehydrogenase; o 87.6 0.78 2.7E-05 46.5 6.4 103 326-443 3-122 (309)
130 1sc6_A PGDH, D-3-phosphoglycer 87.6 7.2 0.00025 41.3 14.1 119 292-441 91-234 (404)
131 2d4a_B Malate dehydrogenase; a 87.4 0.58 2E-05 47.6 5.3 98 327-443 1-119 (308)
132 3p7m_A Malate dehydrogenase; p 87.3 0.4 1.4E-05 49.2 4.1 106 324-443 4-125 (321)
133 3nep_X Malate dehydrogenase; h 87.3 0.4 1.4E-05 49.2 4.1 104 327-443 2-121 (314)
134 3i83_A 2-dehydropantoate 2-red 87.3 0.86 2.9E-05 45.8 6.5 102 326-444 3-109 (320)
135 3ado_A Lambda-crystallin; L-gu 87.1 0.68 2.3E-05 47.8 5.7 33 325-369 6-38 (319)
136 1up7_A 6-phospho-beta-glucosid 87.0 0.88 3E-05 48.5 6.7 124 326-466 3-164 (417)
137 1j4a_A D-LDH, D-lactate dehydr 87.0 7.8 0.00027 39.7 13.5 123 291-443 91-238 (333)
138 2yq5_A D-isomer specific 2-hyd 86.8 7.4 0.00025 40.4 13.3 121 292-443 92-239 (343)
139 4huj_A Uncharacterized protein 86.8 0.69 2.4E-05 44.1 5.2 93 326-444 24-117 (220)
140 3kkj_A Amine oxidase, flavin-c 86.8 0.59 2E-05 41.4 4.4 31 327-369 4-34 (336)
141 1npy_A Hypothetical shikimate 86.8 0.83 2.8E-05 45.8 6.0 48 310-369 105-152 (271)
142 1jw9_B Molybdopterin biosynthe 86.6 0.5 1.7E-05 46.4 4.2 38 322-370 28-65 (249)
143 1nvt_A Shikimate 5'-dehydrogen 86.5 0.68 2.3E-05 46.1 5.2 49 308-369 111-159 (287)
144 1txg_A Glycerol-3-phosphate de 86.4 1.2 4E-05 44.3 6.8 94 327-443 2-107 (335)
145 2raf_A Putative dinucleotide-b 86.3 1.7 5.7E-05 41.2 7.6 80 321-444 15-94 (209)
146 3vh1_A Ubiquitin-like modifier 86.2 0.59 2E-05 52.3 5.0 38 321-369 323-360 (598)
147 4dgs_A Dehydrogenase; structur 86.2 4.5 0.00015 41.9 11.3 120 304-455 130-273 (340)
148 3tl2_A Malate dehydrogenase; c 86.2 0.55 1.9E-05 48.2 4.4 107 323-443 6-130 (315)
149 2pi1_A D-lactate dehydrogenase 86.0 4.2 0.00014 41.9 10.9 121 293-443 87-233 (334)
150 1dxy_A D-2-hydroxyisocaproate 85.7 7.2 0.00025 40.0 12.5 121 292-443 90-236 (333)
151 1hye_A L-lactate/malate dehydr 85.5 1.2 4.2E-05 45.0 6.6 103 327-443 2-125 (313)
152 2p4q_A 6-phosphogluconate dehy 85.4 1.9 6.6E-05 46.8 8.4 98 326-443 11-112 (497)
153 3hg7_A D-isomer specific 2-hyd 85.3 1.8 6.3E-05 44.6 7.8 186 293-522 89-302 (324)
154 3pqe_A L-LDH, L-lactate dehydr 85.3 0.52 1.8E-05 48.6 3.7 106 325-443 5-125 (326)
155 2w2k_A D-mandelate dehydrogena 84.7 6.6 0.00023 40.4 11.7 97 320-442 158-258 (348)
156 1gdh_A D-glycerate dehydrogena 84.6 4.8 0.00017 41.0 10.5 122 292-441 89-239 (320)
157 3gvx_A Glycerate dehydrogenase 84.4 6.4 0.00022 39.9 11.2 176 304-523 85-282 (290)
158 2g76_A 3-PGDH, D-3-phosphoglyc 84.4 4.6 0.00016 41.6 10.4 119 293-441 112-256 (335)
159 3k96_A Glycerol-3-phosphate de 84.2 1.9 6.4E-05 44.7 7.3 100 325-444 29-137 (356)
160 2nac_A NAD-dependent formate d 84.2 4.4 0.00015 42.9 10.3 111 304-441 150-284 (393)
161 1ks9_A KPA reductase;, 2-dehyd 83.9 1.6 5.5E-05 42.1 6.3 95 327-443 2-100 (291)
162 1hdo_A Biliverdin IX beta redu 83.8 2.9 9.7E-05 37.7 7.6 97 326-440 4-111 (206)
163 1f0y_A HCDH, L-3-hydroxyacyl-C 83.8 1 3.4E-05 44.8 4.9 32 326-369 16-47 (302)
164 3b1f_A Putative prephenate deh 83.8 1.8 6.1E-05 42.4 6.6 97 325-443 6-104 (290)
165 3pp8_A Glyoxylate/hydroxypyruv 83.2 2.1 7.4E-05 43.8 7.2 191 292-522 86-301 (315)
166 1y7t_A Malate dehydrogenase; N 83.2 0.85 2.9E-05 46.1 4.2 110 326-443 5-133 (327)
167 3ggo_A Prephenate dehydrogenas 82.9 3.1 0.00011 42.1 8.2 89 326-440 34-128 (314)
168 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.7 1.9 6.6E-05 46.3 6.9 97 327-443 3-106 (478)
169 1y8q_A Ubiquitin-like 1 activa 82.6 1 3.4E-05 46.7 4.5 38 321-369 32-69 (346)
170 3gg9_A D-3-phosphoglycerate de 82.5 5.2 0.00018 41.6 9.9 188 293-522 98-325 (352)
171 2ew2_A 2-dehydropantoate 2-red 82.4 0.66 2.3E-05 45.3 2.9 101 326-444 4-112 (316)
172 1x0v_A GPD-C, GPDH-C, glycerol 82.0 2.7 9.1E-05 42.3 7.3 111 325-444 8-128 (354)
173 2x0j_A Malate dehydrogenase; o 81.9 1.8 6.3E-05 44.0 6.1 104 327-443 2-121 (294)
174 3c24_A Putative oxidoreductase 81.7 2.5 8.4E-05 41.5 6.8 91 326-443 12-104 (286)
175 4fgw_A Glycerol-3-phosphate de 81.6 1.4 4.8E-05 46.7 5.3 22 326-347 35-56 (391)
176 3fi9_A Malate dehydrogenase; s 81.6 1.9 6.5E-05 44.8 6.2 107 323-443 6-129 (343)
177 2iz1_A 6-phosphogluconate dehy 81.6 3 0.0001 44.7 7.9 99 325-443 5-106 (474)
178 2qrj_A Saccharopine dehydrogen 81.6 3.3 0.00011 44.1 8.1 71 325-427 214-289 (394)
179 2vns_A Metalloreductase steap3 81.5 1.2 4.2E-05 42.2 4.4 94 323-444 26-119 (215)
180 1jay_A Coenzyme F420H2:NADP+ o 81.4 0.72 2.4E-05 42.9 2.6 94 327-444 2-101 (212)
181 3phh_A Shikimate dehydrogenase 81.1 1.3 4.3E-05 44.7 4.5 98 310-440 107-209 (269)
182 3gt0_A Pyrroline-5-carboxylate 81.0 3.2 0.00011 39.9 7.2 98 326-444 3-101 (247)
183 2h78_A Hibadh, 3-hydroxyisobut 80.6 1.5 5.1E-05 43.3 4.8 32 326-369 4-35 (302)
184 4aj2_A L-lactate dehydrogenase 80.6 0.86 2.9E-05 47.2 3.1 108 322-443 16-139 (331)
185 1hyu_A AHPF, alkyl hydroperoxi 80.6 1.4 4.8E-05 47.4 4.9 99 256-369 135-244 (521)
186 3k6j_A Protein F01G10.3, confi 80.6 1.6 5.5E-05 47.2 5.4 36 480-515 232-267 (460)
187 3lk7_A UDP-N-acetylmuramoylala 80.3 2 6.7E-05 45.6 5.9 115 322-467 6-120 (451)
188 4ina_A Saccharopine dehydrogen 80.2 2.1 7.3E-05 44.8 6.0 96 326-441 2-108 (405)
189 3pef_A 6-phosphogluconate dehy 80.1 2 7E-05 42.1 5.6 32 326-369 2-33 (287)
190 4e5n_A Thermostable phosphite 80.0 4.5 0.00015 41.6 8.2 124 292-443 89-239 (330)
191 1mx3_A CTBP1, C-terminal bindi 79.9 8.4 0.00029 39.9 10.3 209 272-521 88-333 (347)
192 4dll_A 2-hydroxy-3-oxopropiona 79.6 2.8 9.6E-05 42.2 6.5 34 324-369 30-63 (320)
193 2g5c_A Prephenate dehydrogenas 79.6 4.1 0.00014 39.6 7.5 97 326-443 2-99 (281)
194 2pgd_A 6-phosphogluconate dehy 79.5 3.3 0.00011 44.5 7.4 98 326-443 3-104 (482)
195 4gwg_A 6-phosphogluconate dehy 79.5 3.6 0.00012 44.7 7.7 98 326-443 5-106 (484)
196 3l6d_A Putative oxidoreductase 79.4 2 6.8E-05 43.0 5.3 36 322-369 6-41 (306)
197 3ldh_A Lactate dehydrogenase; 79.1 0.94 3.2E-05 47.0 2.9 106 324-443 20-141 (330)
198 1yj8_A Glycerol-3-phosphate de 79.1 2.4 8.1E-05 43.5 5.9 110 326-444 22-145 (375)
199 2uyy_A N-PAC protein; long-cha 79.0 2.6 8.7E-05 41.9 5.9 32 326-369 31-62 (316)
200 3gpi_A NAD-dependent epimerase 79.0 1.7 5.8E-05 41.9 4.5 95 325-440 3-109 (286)
201 3qsg_A NAD-binding phosphogluc 78.9 8.3 0.00028 38.6 9.7 34 325-369 24-57 (312)
202 3abi_A Putative uncharacterize 78.9 1.3 4.5E-05 45.4 3.9 89 326-441 17-109 (365)
203 3e8x_A Putative NAD-dependent 78.8 4.3 0.00015 37.9 7.1 100 321-440 17-131 (236)
204 3pdu_A 3-hydroxyisobutyrate de 78.7 2.5 8.5E-05 41.5 5.7 32 326-369 2-33 (287)
205 4egb_A DTDP-glucose 4,6-dehydr 78.6 5.8 0.0002 39.1 8.3 106 323-440 22-149 (346)
206 2izz_A Pyrroline-5-carboxylate 77.8 7.1 0.00024 39.2 8.9 100 324-444 21-122 (322)
207 3ip1_A Alcohol dehydrogenase, 77.8 9.3 0.00032 39.4 9.9 83 310-415 198-292 (404)
208 3kb6_A D-lactate dehydrogenase 77.6 13 0.00044 38.3 10.8 109 320-462 136-250 (334)
209 3vrd_B FCCB subunit, flavocyto 77.6 2.6 9E-05 42.8 5.6 35 325-369 2-36 (401)
210 3c85_A Putative glutathione-re 77.3 3.4 0.00011 37.5 5.7 37 322-369 36-72 (183)
211 3doj_A AT3G25530, dehydrogenas 77.0 4 0.00014 40.8 6.7 36 322-369 18-53 (310)
212 1yb4_A Tartronic semialdehyde 76.8 3.6 0.00012 40.0 6.2 30 326-367 4-33 (295)
213 4b4u_A Bifunctional protein fo 76.4 7 0.00024 40.3 8.4 85 303-425 157-242 (303)
214 1tt5_B Ubiquitin-activating en 76.3 1.7 5.7E-05 46.7 3.9 38 321-369 36-73 (434)
215 3cky_A 2-hydroxymethyl glutara 75.9 2.4 8E-05 41.6 4.6 32 326-369 5-36 (301)
216 1y8q_B Anthracycline-, ubiquit 74.9 2 6.7E-05 48.5 4.1 38 321-369 13-50 (640)
217 3qha_A Putative oxidoreductase 74.8 3.8 0.00013 40.7 5.8 33 325-369 15-47 (296)
218 4ezb_A Uncharacterized conserv 74.7 4 0.00014 41.2 6.0 33 326-369 25-57 (317)
219 2z2v_A Hypothetical protein PH 74.7 2 6.7E-05 44.7 3.8 120 324-472 15-137 (365)
220 2f1k_A Prephenate dehydrogenas 74.6 5.9 0.0002 38.3 7.0 90 327-441 2-92 (279)
221 4hb9_A Similarities with proba 74.4 2.8 9.4E-05 41.8 4.7 32 326-369 2-33 (412)
222 1bg6_A N-(1-D-carboxylethyl)-L 73.8 8.2 0.00028 38.4 8.0 93 326-441 5-110 (359)
223 2pzm_A Putative nucleotide sug 73.7 6.6 0.00022 38.7 7.2 103 321-440 16-136 (330)
224 3d1c_A Flavin-containing putat 73.3 3.2 0.00011 41.1 4.8 35 325-370 4-38 (369)
225 3dhn_A NAD-dependent epimerase 73.2 4.6 0.00016 37.2 5.6 96 326-440 5-112 (227)
226 5mdh_A Malate dehydrogenase; o 73.1 1.3 4.5E-05 45.7 2.0 110 326-443 4-132 (333)
227 1vpd_A Tartronate semialdehyde 73.0 2.6 8.9E-05 41.2 4.0 32 326-369 6-37 (299)
228 1i36_A Conserved hypothetical 72.9 6.1 0.00021 37.9 6.6 30 327-368 2-31 (264)
229 3fwz_A Inner membrane protein 72.8 1.8 6E-05 38.1 2.5 32 326-369 8-39 (140)
230 3i6i_A Putative leucoanthocyan 72.8 1.8 6.1E-05 43.1 2.9 101 322-437 7-117 (346)
231 4id9_A Short-chain dehydrogena 71.5 8.4 0.00029 37.9 7.4 97 321-440 15-126 (347)
232 3hhp_A Malate dehydrogenase; M 71.4 4.5 0.00015 41.4 5.5 103 327-443 2-121 (312)
233 1ygy_A PGDH, D-3-phosphoglycer 71.3 12 0.00042 40.6 9.3 120 292-440 88-232 (529)
234 3pdi_B Nitrogenase MOFE cofact 71.0 1.9 6.6E-05 46.3 2.8 182 153-414 177-384 (458)
235 3r6d_A NAD-dependent epimerase 70.8 4.5 0.00015 37.4 5.0 95 326-439 6-107 (221)
236 2z1m_A GDP-D-mannose dehydrata 70.7 7.7 0.00026 37.8 6.8 103 324-440 2-127 (345)
237 2q1w_A Putative nucleotide sug 70.6 13 0.00043 36.7 8.4 104 322-440 18-137 (333)
238 3m2p_A UDP-N-acetylglucosamine 69.7 12 0.00042 36.3 8.0 93 326-440 3-109 (311)
239 2pv7_A T-protein [includes: ch 69.3 11 0.00039 37.3 7.8 32 326-369 22-54 (298)
240 2nvu_B Maltose binding protein 68.9 3.6 0.00012 46.8 4.5 36 323-369 409-444 (805)
241 3ic5_A Putative saccharopine d 68.8 5.1 0.00017 32.8 4.4 84 325-430 5-92 (118)
242 3g0o_A 3-hydroxyisobutyrate de 68.7 3.7 0.00012 40.8 4.0 33 325-369 7-39 (303)
243 2yjz_A Metalloreductase steap4 71.7 1 3.5E-05 42.8 0.0 92 323-443 17-108 (201)
244 3fbs_A Oxidoreductase; structu 68.4 4.5 0.00015 38.4 4.5 32 326-369 3-34 (297)
245 2bka_A CC3, TAT-interacting pr 68.4 14 0.00048 34.3 7.8 102 323-440 16-132 (242)
246 4a9w_A Monooxygenase; baeyer-v 68.4 4 0.00014 39.6 4.2 34 325-370 3-36 (357)
247 1lss_A TRK system potassium up 68.4 5.6 0.00019 33.6 4.7 33 325-369 4-36 (140)
248 2cvz_A Dehydrogenase, 3-hydrox 68.0 5 0.00017 38.8 4.8 30 327-369 3-32 (289)
249 3vtz_A Glucose 1-dehydrogenase 67.9 17 0.00059 35.2 8.6 79 320-416 9-92 (269)
250 3alj_A 2-methyl-3-hydroxypyrid 67.9 4.9 0.00017 40.5 4.9 38 322-371 8-45 (379)
251 2zbw_A Thioredoxin reductase; 66.8 4.9 0.00017 39.2 4.5 34 325-370 5-38 (335)
252 3f8d_A Thioredoxin reductase ( 66.8 5 0.00017 38.4 4.5 33 325-369 15-47 (323)
253 3fg2_P Putative rubredoxin red 66.8 4.9 0.00017 41.2 4.7 36 326-371 2-37 (404)
254 3oz2_A Digeranylgeranylglycero 66.7 4.7 0.00016 39.7 4.4 31 327-369 6-36 (397)
255 3s2u_A UDP-N-acetylglucosamine 66.6 7.5 0.00026 39.5 6.0 40 398-441 85-124 (365)
256 1tt5_A APPBP1, amyloid protein 66.6 3 0.0001 45.8 3.1 38 321-369 28-65 (531)
257 2jae_A L-amino acid oxidase; o 66.2 4.9 0.00017 41.9 4.6 42 318-371 4-45 (489)
258 3lzw_A Ferredoxin--NADP reduct 66.0 5.4 0.00018 38.5 4.6 33 325-369 7-39 (332)
259 3hyw_A Sulfide-quinone reducta 65.9 4.4 0.00015 42.1 4.1 34 326-369 3-36 (430)
260 3llv_A Exopolyphosphatase-rela 65.5 5.8 0.0002 34.3 4.2 34 324-369 5-38 (141)
261 3ef6_A Toluene 1,2-dioxygenase 65.5 9.9 0.00034 39.1 6.7 37 326-372 3-39 (410)
262 2ahr_A Putative pyrroline carb 65.0 4.8 0.00016 38.6 3.9 90 326-443 4-93 (259)
263 3slg_A PBGP3 protein; structur 64.9 25 0.00084 35.0 9.3 101 322-440 21-141 (372)
264 1n2s_A DTDP-4-, DTDP-glucose o 64.9 6.8 0.00023 37.6 5.0 86 327-440 2-104 (299)
265 3lxd_A FAD-dependent pyridine 64.4 5.8 0.0002 40.7 4.7 38 324-371 8-45 (415)
266 2ywl_A Thioredoxin reductase r 64.3 6.5 0.00022 35.1 4.5 32 326-369 2-33 (180)
267 2q7v_A Thioredoxin reductase; 64.3 5.5 0.00019 38.9 4.3 33 325-369 8-40 (325)
268 2ph5_A Homospermidine synthase 64.3 18 0.00062 39.4 8.7 98 325-441 13-115 (480)
269 3h8l_A NADH oxidase; membrane 64.0 5.7 0.0002 40.5 4.5 36 326-370 2-37 (409)
270 3c96_A Flavin-containing monoo 63.8 6.6 0.00023 40.1 5.0 35 325-370 4-38 (410)
271 1np3_A Ketol-acid reductoisome 63.8 8.9 0.0003 39.0 5.9 88 323-437 14-104 (338)
272 3itj_A Thioredoxin reductase 1 63.7 4.9 0.00017 38.9 3.8 33 325-369 22-54 (338)
273 4ej6_A Putative zinc-binding d 63.7 19 0.00064 36.8 8.3 91 300-414 159-262 (370)
274 3klj_A NAD(FAD)-dependent dehy 63.7 7.1 0.00024 40.3 5.2 37 324-372 8-44 (385)
275 2nu8_A Succinyl-COA ligase [AD 63.5 12 0.00042 37.4 6.8 86 325-436 7-93 (288)
276 3nix_A Flavoprotein/dehydrogen 63.0 8.7 0.0003 38.8 5.6 35 325-371 5-39 (421)
277 4b8w_A GDP-L-fucose synthase; 62.9 10 0.00034 36.1 5.8 93 322-440 3-113 (319)
278 3dme_A Conserved exported prot 62.8 6.9 0.00024 38.2 4.7 33 325-369 4-36 (369)
279 3rp8_A Flavoprotein monooxygen 62.7 6.9 0.00024 39.7 4.8 36 323-370 21-56 (407)
280 2vou_A 2,6-dihydroxypyridine h 62.5 7.8 0.00027 39.3 5.2 35 324-370 4-38 (397)
281 2xdo_A TETX2 protein; tetracyc 62.5 6.5 0.00022 40.0 4.6 36 323-370 24-59 (398)
282 2q0l_A TRXR, thioredoxin reduc 62.4 7.2 0.00025 37.6 4.7 33 326-369 2-34 (311)
283 1e6u_A GDP-fucose synthetase; 62.3 9.2 0.00031 37.1 5.4 87 325-440 3-107 (321)
284 1uzm_A 3-oxoacyl-[acyl-carrier 62.3 16 0.00056 34.6 7.1 78 320-416 10-92 (247)
285 3ehe_A UDP-glucose 4-epimerase 62.1 24 0.00081 34.2 8.4 95 327-440 3-114 (313)
286 1yvv_A Amine oxidase, flavin-c 62.0 6.8 0.00023 38.1 4.5 33 326-370 3-35 (336)
287 1ryi_A Glycine oxidase; flavop 62.0 7.2 0.00025 38.8 4.7 35 325-371 17-51 (382)
288 1pqw_A Polyketide synthase; ro 62.0 18 0.00062 32.9 7.1 50 308-369 22-72 (198)
289 2dq4_A L-threonine 3-dehydroge 62.0 8 0.00027 38.8 5.1 49 308-369 149-198 (343)
290 3cmm_A Ubiquitin-activating en 61.9 6.3 0.00022 46.7 4.9 38 321-369 23-60 (1015)
291 3ktd_A Prephenate dehydrogenas 61.7 13 0.00043 38.4 6.6 89 326-440 9-101 (341)
292 3cgv_A Geranylgeranyl reductas 61.7 7.1 0.00024 38.9 4.6 34 325-370 4-37 (397)
293 3k7m_X 6-hydroxy-L-nicotine ox 61.4 7.5 0.00026 39.5 4.8 32 327-370 3-34 (431)
294 2c20_A UDP-glucose 4-epimerase 61.3 15 0.00053 35.6 6.9 99 326-440 2-118 (330)
295 3grf_A Ornithine carbamoyltran 61.3 28 0.00096 36.0 9.1 136 257-411 91-240 (328)
296 3cty_A Thioredoxin reductase; 61.2 7.2 0.00024 37.9 4.5 33 325-369 16-48 (319)
297 3e48_A Putative nucleoside-dip 61.2 13 0.00043 35.7 6.2 97 327-440 2-106 (289)
298 3enk_A UDP-glucose 4-epimerase 61.2 22 0.00075 34.7 8.0 97 325-440 5-129 (341)
299 3r9u_A Thioredoxin reductase; 61.2 7 0.00024 37.4 4.3 33 325-369 4-37 (315)
300 2x3n_A Probable FAD-dependent 61.1 7.1 0.00024 39.4 4.5 34 325-370 6-39 (399)
301 1id1_A Putative potassium chan 61.0 8.5 0.00029 33.9 4.5 34 324-369 2-35 (153)
302 1y56_B Sarcosine oxidase; dehy 61.0 7.5 0.00026 38.8 4.6 34 325-370 5-38 (382)
303 4ep1_A Otcase, ornithine carba 60.9 46 0.0016 34.7 10.6 129 264-414 122-256 (340)
304 3nrc_A Enoyl-[acyl-carrier-pro 60.8 13 0.00043 36.1 6.2 79 322-417 23-115 (280)
305 2gf3_A MSOX, monomeric sarcosi 60.8 7.4 0.00025 38.7 4.6 35 326-372 4-38 (389)
306 3ab1_A Ferredoxin--NADP reduct 60.5 7.9 0.00027 38.4 4.7 34 325-370 14-47 (360)
307 3ew7_A LMO0794 protein; Q8Y8U8 60.2 27 0.00094 31.5 8.0 91 327-440 2-103 (221)
308 2dkn_A 3-alpha-hydroxysteroid 60.2 11 0.00038 35.0 5.4 68 327-416 3-73 (255)
309 2vdc_G Glutamate synthase [NAD 60.0 8.4 0.00029 40.9 5.1 34 324-369 121-154 (456)
310 3axb_A Putative oxidoreductase 59.8 7.6 0.00026 39.9 4.6 37 321-368 19-55 (448)
311 2gag_B Heterotetrameric sarcos 59.7 9.3 0.00032 38.2 5.1 35 325-370 21-56 (405)
312 4eqs_A Coenzyme A disulfide re 59.3 7.6 0.00026 40.6 4.5 34 327-370 2-35 (437)
313 2d8a_A PH0655, probable L-thre 59.2 7.8 0.00027 39.0 4.4 48 308-368 153-200 (348)
314 2p5y_A UDP-glucose 4-epimerase 59.2 16 0.00055 35.3 6.6 98 327-440 2-117 (311)
315 3gg2_A Sugar dehydrogenase, UD 59.1 7.4 0.00025 41.6 4.4 32 326-369 3-34 (450)
316 1zk7_A HGII, reductase, mercur 58.9 8.6 0.0003 40.2 4.9 33 325-369 4-36 (467)
317 3dje_A Fructosyl amine: oxygen 58.6 8.4 0.00029 39.4 4.6 37 325-372 6-42 (438)
318 2gqw_A Ferredoxin reductase; f 58.6 10 0.00034 39.1 5.2 38 325-372 7-44 (408)
319 1k0i_A P-hydroxybenzoate hydro 58.5 9.4 0.00032 38.4 4.9 33 326-370 3-35 (394)
320 2gv8_A Monooxygenase; FMO, FAD 58.4 7.8 0.00027 40.2 4.4 36 324-369 5-40 (447)
321 2uzz_A N-methyl-L-tryptophan o 58.2 8.1 0.00028 38.3 4.3 35 326-372 3-37 (372)
322 3dfz_A SIRC, precorrin-2 dehyd 58.2 7.7 0.00026 38.0 4.0 36 322-369 28-63 (223)
323 3qvo_A NMRA family protein; st 57.8 12 0.00042 35.0 5.3 101 323-440 21-125 (236)
324 4a7p_A UDP-glucose dehydrogena 57.8 30 0.001 37.0 8.9 33 325-369 8-40 (446)
325 1c0p_A D-amino acid oxidase; a 57.7 11 0.00036 37.6 5.1 34 325-370 6-39 (363)
326 3ek2_A Enoyl-(acyl-carrier-pro 57.4 10 0.00035 36.0 4.7 37 321-369 10-49 (271)
327 2x4g_A Nucleoside-diphosphate- 57.4 22 0.00076 34.6 7.3 97 326-440 14-126 (342)
328 1pl8_A Human sorbitol dehydrog 56.9 16 0.00054 36.9 6.3 49 308-368 156-204 (356)
329 3uox_A Otemo; baeyer-villiger 56.8 9.8 0.00033 41.3 5.0 35 324-370 8-42 (545)
330 1vl0_A DTDP-4-dehydrorhamnose 56.8 10 0.00035 36.3 4.6 87 323-440 10-113 (292)
331 1trb_A Thioredoxin reductase; 56.7 6.7 0.00023 37.9 3.4 34 324-369 4-37 (320)
332 3tzq_B Short-chain type dehydr 56.7 11 0.00037 36.5 4.9 78 321-416 7-96 (271)
333 2xve_A Flavin-containing monoo 56.7 8.9 0.00031 40.4 4.6 38 326-369 3-40 (464)
334 3un1_A Probable oxidoreductase 56.5 28 0.00097 33.4 7.8 76 323-416 26-107 (260)
335 2oln_A NIKD protein; flavoprot 56.4 10 0.00034 38.2 4.7 36 325-372 4-39 (397)
336 3i3l_A Alkylhalidase CMLS; fla 56.4 14 0.00048 40.7 6.2 37 323-371 21-57 (591)
337 3dqp_A Oxidoreductase YLBE; al 56.3 20 0.00068 32.9 6.4 94 327-440 2-106 (219)
338 1vdc_A NTR, NADPH dependent th 56.1 8 0.00028 37.6 3.8 33 324-368 7-39 (333)
339 2c5a_A GDP-mannose-3', 5'-epim 55.9 37 0.0013 34.2 8.8 98 325-440 29-145 (379)
340 3iwa_A FAD-dependent pyridine 55.9 9.5 0.00032 39.9 4.6 37 325-371 3-39 (472)
341 2q1s_A Putative nucleotide sug 55.7 20 0.00068 36.0 6.8 103 322-440 29-151 (377)
342 2o7s_A DHQ-SDH PR, bifunctiona 55.7 13 0.00045 40.2 5.8 36 322-369 361-396 (523)
343 1hxh_A 3BETA/17BETA-hydroxyste 55.6 7.4 0.00025 37.1 3.4 37 322-369 3-39 (253)
344 4gbj_A 6-phosphogluconate dehy 55.5 19 0.00067 35.9 6.6 31 326-368 6-36 (297)
345 3ka7_A Oxidoreductase; structu 55.5 11 0.00038 38.0 4.9 32 327-370 2-33 (425)
346 2yy7_A L-threonine dehydrogena 55.5 8.8 0.0003 37.0 3.9 99 326-440 3-118 (312)
347 4ap3_A Steroid monooxygenase; 55.4 9.6 0.00033 41.4 4.7 35 324-370 20-54 (549)
348 3nrn_A Uncharacterized protein 55.4 11 0.00039 38.3 5.0 33 327-371 2-34 (421)
349 1dxl_A Dihydrolipoamide dehydr 55.4 11 0.00038 39.2 5.0 33 325-369 6-38 (470)
350 3sx6_A Sulfide-quinone reducta 55.4 11 0.00037 39.1 4.9 36 326-370 5-40 (437)
351 1hdc_A 3-alpha, 20 beta-hydrox 55.3 10 0.00034 36.3 4.3 37 322-369 2-38 (254)
352 3tpf_A Otcase, ornithine carba 55.2 77 0.0026 32.4 11.1 135 256-413 81-222 (307)
353 2r9z_A Glutathione amide reduc 55.2 10 0.00035 39.9 4.6 33 325-369 4-36 (463)
354 3s5w_A L-ornithine 5-monooxyge 55.1 8.2 0.00028 39.9 3.9 39 325-371 30-69 (463)
355 3sc6_A DTDP-4-dehydrorhamnose 55.0 7.7 0.00026 37.1 3.4 84 326-440 6-106 (287)
356 3i1j_A Oxidoreductase, short c 54.8 27 0.00091 32.7 7.1 38 321-369 10-47 (247)
357 3urh_A Dihydrolipoyl dehydroge 54.8 10 0.00035 40.0 4.6 34 325-370 25-58 (491)
358 2hqm_A GR, grase, glutathione 54.6 9.8 0.00034 40.1 4.4 35 324-370 10-44 (479)
359 3tpc_A Short chain alcohol deh 54.5 29 0.001 32.9 7.4 37 322-369 4-40 (257)
360 2eq6_A Pyruvate dehydrogenase 54.4 9.8 0.00034 39.9 4.4 35 324-370 5-39 (464)
361 4a2c_A Galactitol-1-phosphate 54.2 29 0.001 34.4 7.7 55 302-368 139-193 (346)
362 1yqd_A Sinapyl alcohol dehydro 53.7 25 0.00087 35.6 7.2 49 308-368 171-219 (366)
363 3uko_A Alcohol dehydrogenase c 53.7 23 0.00079 36.0 6.9 45 313-368 182-226 (378)
364 3csu_A Protein (aspartate carb 53.6 1E+02 0.0036 31.5 11.8 129 264-414 95-230 (310)
365 3ruf_A WBGU; rossmann fold, UD 53.6 9.5 0.00032 37.6 3.9 101 323-440 23-151 (351)
366 3h28_A Sulfide-quinone reducta 53.5 12 0.0004 38.7 4.7 35 326-370 3-37 (430)
367 2zcu_A Uncharacterized oxidore 53.5 9.6 0.00033 36.2 3.8 98 327-440 1-104 (286)
368 1xq6_A Unknown protein; struct 53.4 15 0.00053 33.8 5.1 100 324-440 3-133 (253)
369 1w4x_A Phenylacetone monooxyge 53.2 13 0.00043 40.1 5.1 35 324-370 15-49 (542)
370 1dlj_A UDP-glucose dehydrogena 53.1 12 0.0004 39.1 4.7 30 327-369 2-31 (402)
371 3m6i_A L-arabinitol 4-dehydrog 53.1 14 0.00048 37.3 5.1 55 302-368 158-212 (363)
372 2qae_A Lipoamide, dihydrolipoy 53.0 12 0.00039 39.2 4.6 34 325-370 2-35 (468)
373 3v76_A Flavoprotein; structura 53.0 11 0.00036 39.6 4.4 35 325-371 27-61 (417)
374 2wm3_A NMRA-like family domain 53.0 6.6 0.00023 38.0 2.6 99 325-441 5-115 (299)
375 2q2v_A Beta-D-hydroxybutyrate 52.9 12 0.0004 35.7 4.3 36 323-369 2-37 (255)
376 2cul_A Glucose-inhibited divis 52.8 12 0.00041 35.3 4.3 33 325-369 3-35 (232)
377 2dtx_A Glucose 1-dehydrogenase 52.8 45 0.0015 32.0 8.6 76 322-416 5-85 (264)
378 4gcm_A TRXR, thioredoxin reduc 52.6 12 0.0004 36.4 4.3 31 327-369 8-38 (312)
379 3sxp_A ADP-L-glycero-D-mannohe 52.4 25 0.00086 34.9 6.9 108 321-440 6-138 (362)
380 1sb8_A WBPP; epimerase, 4-epim 52.4 14 0.00048 36.5 5.0 101 323-440 25-153 (352)
381 1mo9_A ORF3; nucleotide bindin 52.3 11 0.00037 40.3 4.4 35 324-370 42-76 (523)
382 1fl2_A Alkyl hydroperoxide red 52.1 11 0.00038 36.2 4.1 32 326-369 2-33 (310)
383 1q1r_A Putidaredoxin reductase 52.1 14 0.00047 38.4 5.0 37 325-371 4-40 (431)
384 3ihm_A Styrene monooxygenase A 52.1 11 0.00038 39.1 4.3 32 326-369 23-54 (430)
385 3ntd_A FAD-dependent pyridine 52.1 15 0.00052 39.1 5.5 37 326-372 2-38 (565)
386 3k30_A Histamine dehydrogenase 52.0 14 0.00049 41.0 5.4 34 325-370 391-424 (690)
387 2yqu_A 2-oxoglutarate dehydrog 51.9 12 0.00041 38.9 4.5 33 326-370 2-34 (455)
388 2zb4_A Prostaglandin reductase 51.9 24 0.00082 35.4 6.7 56 303-369 137-195 (357)
389 4gde_A UDP-galactopyranose mut 51.9 14 0.00047 38.4 5.0 23 325-347 10-32 (513)
390 2weu_A Tryptophan 5-halogenase 51.9 9.6 0.00033 40.2 3.8 37 326-371 3-39 (511)
391 1m6i_A Programmed cell death p 51.9 14 0.0005 39.1 5.2 38 324-371 10-47 (493)
392 2aqj_A Tryptophan halogenase, 51.8 12 0.00042 39.9 4.7 37 325-370 5-41 (538)
393 1zk4_A R-specific alcohol dehy 51.6 9.5 0.00033 35.7 3.4 38 321-369 2-39 (251)
394 3p19_A BFPVVD8, putative blue 51.6 16 0.00053 35.5 5.0 82 320-416 11-98 (266)
395 2ydy_A Methionine adenosyltran 51.6 28 0.00095 33.6 6.9 92 325-440 2-110 (315)
396 1zmd_A Dihydrolipoyl dehydroge 51.6 12 0.00041 39.1 4.5 34 325-370 6-39 (474)
397 2e4g_A Tryptophan halogenase; 51.5 13 0.00043 40.1 4.8 38 325-371 25-62 (550)
398 3kd9_A Coenzyme A disulfide re 51.5 17 0.00059 37.6 5.7 37 325-371 3-39 (449)
399 1ges_A Glutathione reductase; 51.3 10 0.00035 39.6 3.9 33 325-369 4-36 (450)
400 2qa2_A CABE, polyketide oxygen 51.2 13 0.00043 39.8 4.6 34 324-369 11-44 (499)
401 2qcu_A Aerobic glycerol-3-phos 51.2 12 0.00042 39.6 4.6 34 325-370 3-36 (501)
402 2a87_A TRXR, TR, thioredoxin r 51.1 10 0.00035 37.2 3.7 34 324-369 13-46 (335)
403 2wpf_A Trypanothione reductase 51.0 16 0.00054 38.8 5.4 32 325-367 7-38 (495)
404 3ko8_A NAD-dependent epimerase 50.9 47 0.0016 31.8 8.4 94 327-440 2-113 (312)
405 2a8x_A Dihydrolipoyl dehydroge 50.8 12 0.00042 38.9 4.4 33 325-369 3-35 (464)
406 4gqa_A NAD binding oxidoreduct 50.8 11 0.00037 38.9 4.0 104 313-428 13-118 (412)
407 4b63_A L-ornithine N5 monooxyg 50.6 9 0.00031 40.9 3.4 22 327-348 41-62 (501)
408 1ebd_A E3BD, dihydrolipoamide 50.5 11 0.00039 39.1 4.1 32 326-369 4-35 (455)
409 4g6h_A Rotenone-insensitive NA 50.3 7.7 0.00026 41.7 2.8 32 326-369 43-74 (502)
410 1kyq_A Met8P, siroheme biosynt 50.2 9.4 0.00032 38.5 3.3 36 322-369 10-45 (274)
411 2v3a_A Rubredoxin reductase; a 50.2 12 0.00041 37.9 4.1 35 325-369 4-38 (384)
412 3gwf_A Cyclohexanone monooxyge 50.1 11 0.00036 41.0 3.9 36 324-370 7-42 (540)
413 1rpn_A GDP-mannose 4,6-dehydra 50.1 29 0.00098 33.8 6.7 104 323-440 12-138 (335)
414 1o5i_A 3-oxoacyl-(acyl carrier 50.1 50 0.0017 31.3 8.3 77 321-416 15-92 (249)
415 3cgb_A Pyridine nucleotide-dis 50.1 12 0.0004 39.5 4.2 63 300-372 8-73 (480)
416 3c4a_A Probable tryptophan hyd 49.9 15 0.0005 37.1 4.7 33 327-369 2-34 (381)
417 3ics_A Coenzyme A-disulfide re 49.9 18 0.00063 38.9 5.7 39 324-372 35-73 (588)
418 3qj4_A Renalase; FAD/NAD(P)-bi 49.8 9.9 0.00034 37.5 3.4 35 326-369 2-36 (342)
419 3l8k_A Dihydrolipoyl dehydroge 49.7 15 0.0005 38.5 4.8 35 325-371 4-38 (466)
420 2cdc_A Glucose dehydrogenase g 49.6 42 0.0014 33.8 8.1 33 325-369 181-213 (366)
421 4eez_A Alcohol dehydrogenase 1 49.6 38 0.0013 33.6 7.7 48 309-368 149-196 (348)
422 1lvl_A Dihydrolipoamide dehydr 49.6 13 0.00045 38.8 4.4 33 325-369 5-37 (458)
423 1onf_A GR, grase, glutathione 49.4 13 0.00043 39.5 4.3 33 326-370 3-35 (500)
424 2fzw_A Alcohol dehydrogenase c 49.4 34 0.0011 34.6 7.3 45 313-368 179-223 (373)
425 1oi7_A Succinyl-COA synthetase 49.3 12 0.00041 37.6 3.9 148 325-511 7-162 (288)
426 1rkx_A CDP-glucose-4,6-dehydra 49.3 28 0.00096 34.3 6.6 102 323-440 7-132 (357)
427 1p0f_A NADP-dependent alcohol 49.2 34 0.0012 34.6 7.3 35 323-368 190-224 (373)
428 3n74_A 3-ketoacyl-(acyl-carrie 49.2 13 0.00044 35.3 3.9 77 321-416 5-94 (261)
429 1zq6_A Otcase, ornithine carba 49.2 1.3E+02 0.0044 31.5 11.8 116 280-414 145-274 (359)
430 2d1y_A Hypothetical protein TT 49.2 27 0.00091 33.2 6.2 79 322-416 3-88 (256)
431 2fwm_X 2,3-dihydro-2,3-dihydro 49.1 55 0.0019 30.9 8.4 76 322-415 4-84 (250)
432 3r1i_A Short-chain type dehydr 49.1 41 0.0014 32.6 7.7 78 321-416 28-120 (276)
433 2e1m_A L-glutamate oxidase; L- 49.0 16 0.00054 38.2 4.9 35 323-369 42-76 (376)
434 7mdh_A Protein (malate dehydro 49.0 14 0.00048 39.0 4.5 105 325-443 32-161 (375)
435 4a5l_A Thioredoxin reductase; 49.0 12 0.00041 35.9 3.8 31 327-369 6-36 (314)
436 3o0h_A Glutathione reductase; 48.8 15 0.00053 38.5 4.8 33 325-369 26-58 (484)
437 2bry_A NEDD9 interacting prote 48.8 15 0.00052 39.1 4.8 36 324-371 91-126 (497)
438 2qa1_A PGAE, polyketide oxygen 48.7 14 0.00049 39.4 4.6 36 322-369 8-43 (500)
439 3gaf_A 7-alpha-hydroxysteroid 48.7 26 0.00088 33.5 6.0 38 321-369 8-45 (256)
440 1fjh_A 3alpha-hydroxysteroid d 48.7 28 0.00095 32.7 6.2 69 327-416 3-73 (257)
441 1nff_A Putative oxidoreductase 48.5 22 0.00076 34.0 5.5 38 321-369 3-40 (260)
442 1xg5_A ARPG836; short chain de 48.5 35 0.0012 32.7 7.0 37 322-369 29-65 (279)
443 1v59_A Dihydrolipoamide dehydr 48.5 16 0.00054 38.2 4.8 34 325-370 5-38 (478)
444 3st7_A Capsular polysaccharide 48.3 40 0.0014 33.6 7.6 79 327-440 2-94 (369)
445 3ihg_A RDME; flavoenzyme, anth 48.1 13 0.00045 39.5 4.2 34 325-370 5-38 (535)
446 2bc0_A NADH oxidase; flavoprot 48.0 15 0.00052 38.7 4.6 37 325-370 35-71 (490)
447 1kol_A Formaldehyde dehydrogen 47.9 32 0.0011 35.1 7.0 49 308-368 170-218 (398)
448 3oc4_A Oxidoreductase, pyridin 47.8 17 0.00059 37.7 5.0 36 326-371 3-38 (452)
449 2nm0_A Probable 3-oxacyl-(acyl 47.7 40 0.0014 32.3 7.2 76 321-415 17-97 (253)
450 1s3e_A Amine oxidase [flavin-c 47.7 16 0.00054 38.6 4.7 34 325-370 4-37 (520)
451 3c4n_A Uncharacterized protein 47.6 17 0.00059 37.1 4.9 35 326-370 37-71 (405)
452 1f8f_A Benzyl alcohol dehydrog 47.6 36 0.0012 34.4 7.2 50 308-368 174-223 (371)
453 3k31_A Enoyl-(acyl-carrier-pro 47.4 23 0.00079 34.7 5.6 80 321-416 26-119 (296)
454 3pi7_A NADH oxidoreductase; gr 47.3 66 0.0023 32.1 9.0 42 314-368 155-197 (349)
455 3lad_A Dihydrolipoamide dehydr 47.3 17 0.00058 37.9 4.8 33 325-369 3-35 (476)
456 2bi7_A UDP-galactopyranose mut 47.1 17 0.00057 37.4 4.6 34 325-370 3-36 (384)
457 1pvv_A Otcase, ornithine carba 47.0 1.3E+02 0.0046 30.8 11.3 130 263-413 97-231 (315)
458 3e1t_A Halogenase; flavoprotei 47.0 13 0.00043 39.6 3.8 35 324-370 6-40 (512)
459 1xhc_A NADH oxidase /nitrite r 46.9 12 0.00041 38.1 3.5 35 325-372 8-42 (367)
460 3ak4_A NADH-dependent quinucli 46.8 19 0.00066 34.2 4.8 37 322-369 9-45 (263)
461 3f1l_A Uncharacterized oxidore 46.7 35 0.0012 32.4 6.6 38 321-369 8-45 (252)
462 3e03_A Short chain dehydrogena 46.5 60 0.0021 31.2 8.3 37 322-369 3-39 (274)
463 1rsg_A FMS1 protein; FAD bindi 46.4 17 0.0006 38.3 4.8 25 323-347 6-30 (516)
464 2vvm_A Monoamine oxidase N; FA 46.4 17 0.00058 37.8 4.7 32 326-369 40-71 (495)
465 2i76_A Hypothetical protein; N 46.3 3.1 0.00011 40.8 -1.0 21 326-346 3-23 (276)
466 4fk1_A Putative thioredoxin re 46.2 17 0.00057 35.4 4.3 33 325-369 6-38 (304)
467 1ek6_A UDP-galactose 4-epimera 46.2 14 0.00047 36.3 3.7 101 326-440 3-132 (348)
468 1wly_A CAAR, 2-haloacrylate re 46.2 31 0.0011 34.2 6.4 50 308-369 129-179 (333)
469 1ojt_A Surface protein; redox- 46.0 18 0.00062 38.0 4.8 34 325-370 6-39 (482)
470 3lov_A Protoporphyrinogen oxid 46.0 25 0.00086 36.3 5.8 36 325-370 4-39 (475)
471 2yg5_A Putrescine oxidase; oxi 46.0 18 0.0006 37.1 4.6 35 324-370 4-38 (453)
472 3op4_A 3-oxoacyl-[acyl-carrier 45.9 13 0.00045 35.4 3.4 77 322-416 6-94 (248)
473 1yb1_A 17-beta-hydroxysteroid 45.9 44 0.0015 32.0 7.2 38 321-369 27-64 (272)
474 3mz0_A Inositol 2-dehydrogenas 45.9 22 0.00076 35.6 5.3 93 326-437 3-95 (344)
475 4dgk_A Phytoene dehydrogenase; 45.8 14 0.00048 38.4 3.9 22 326-347 2-23 (501)
476 1o94_A Tmadh, trimethylamine d 45.7 18 0.0006 40.7 4.9 35 324-370 388-422 (729)
477 2pyx_A Tryptophan halogenase; 45.7 15 0.00052 39.1 4.2 39 325-370 7-52 (526)
478 1yqg_A Pyrroline-5-carboxylate 45.7 24 0.00083 33.5 5.3 32 327-369 2-33 (263)
479 1lqt_A FPRA; NADP+ derivative, 45.6 19 0.00064 38.1 4.9 38 325-369 3-42 (456)
480 4dry_A 3-oxoacyl-[acyl-carrier 45.6 23 0.0008 34.5 5.3 38 321-369 29-66 (281)
481 3dk9_A Grase, GR, glutathione 45.6 15 0.00053 38.3 4.2 34 324-369 19-52 (478)
482 1t2a_A GDP-mannose 4,6 dehydra 45.6 39 0.0013 33.6 7.0 101 326-440 25-156 (375)
483 1e3i_A Alcohol dehydrogenase, 45.5 36 0.0012 34.5 6.8 35 323-368 194-228 (376)
484 2cdu_A NADPH oxidase; flavoenz 45.5 18 0.00062 37.5 4.7 34 327-370 2-35 (452)
485 2gn4_A FLAA1 protein, UDP-GLCN 45.5 14 0.0005 37.0 3.8 101 321-440 17-142 (344)
486 4imr_A 3-oxoacyl-(acyl-carrier 45.4 72 0.0024 30.9 8.7 37 322-369 30-66 (275)
487 3nks_A Protoporphyrinogen oxid 45.3 17 0.00057 37.5 4.3 34 326-369 3-36 (477)
488 3e9m_A Oxidoreductase, GFO/IDH 45.3 16 0.00056 36.5 4.2 90 324-437 4-96 (330)
489 1e3j_A NADP(H)-dependent ketos 45.2 25 0.00085 35.3 5.5 48 308-368 153-200 (352)
490 2rgh_A Alpha-glycerophosphate 45.2 17 0.00058 39.6 4.6 34 325-370 32-65 (571)
491 3rwb_A TPLDH, pyridoxal 4-dehy 45.2 20 0.00067 34.1 4.5 38 321-369 2-39 (247)
492 1pjq_A CYSG, siroheme synthase 45.1 20 0.00068 38.2 5.0 26 322-347 9-34 (457)
493 3g3e_A D-amino-acid oxidase; F 45.1 18 0.00063 35.7 4.5 37 327-370 2-39 (351)
494 3da1_A Glycerol-3-phosphate de 45.0 15 0.0005 40.0 4.0 33 325-369 18-50 (561)
495 3nyc_A D-arginine dehydrogenas 45.0 13 0.00045 36.6 3.4 34 324-370 8-41 (381)
496 1nhp_A NADH peroxidase; oxidor 44.8 19 0.00065 37.3 4.7 35 327-371 2-36 (447)
497 4h7p_A Malate dehydrogenase; s 44.7 27 0.00092 36.2 5.8 115 322-443 21-153 (345)
498 2pnf_A 3-oxoacyl-[acyl-carrier 44.7 35 0.0012 31.7 6.1 37 322-369 4-40 (248)
499 2jhf_A Alcohol dehydrogenase E 44.7 37 0.0013 34.3 6.8 35 323-368 190-224 (374)
500 2iid_A L-amino-acid oxidase; f 44.7 24 0.00081 36.8 5.4 33 325-369 33-65 (498)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3.6e-205 Score=1648.84 Aligned_cols=538 Identities=52% Similarity=0.921 Sum_probs=529.8
Q ss_pred ccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhhhhhcccc
Q 007904 46 TISVARDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNV 125 (585)
Q Consensus 46 ~~~~l~~p~~NKGtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~~~ 125 (585)
|..+|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++|+
T Consensus 3 G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~~ 82 (555)
T 1gq2_A 3 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDI 82 (555)
T ss_dssp TTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHTH
T ss_pred hhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhhhH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCCCcccccchhhH
Q 007904 126 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKL 205 (585)
Q Consensus 126 ~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl 205 (585)
+|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|++||||||||||||||||++||||||||+
T Consensus 83 ~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGKl 162 (555)
T 1gq2_A 83 ERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKL 162 (555)
T ss_dssp HHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHHH
T ss_pred HHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHHH
Q 007904 206 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE 285 (585)
Q Consensus 206 ~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~ 285 (585)
+|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++|||+
T Consensus 163 ~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~af~ 242 (555)
T 1gq2_A 163 ALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFR 242 (555)
T ss_dssp HHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHH
T ss_pred HHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEE
Q 007904 286 LLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 365 (585)
Q Consensus 286 lL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~l 365 (585)
||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+++|+++ |+|+|||++||||
T Consensus 243 il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i~~ 321 (555)
T 1gq2_A 243 LLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIWM 321 (555)
T ss_dssp HHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTEEE
T ss_pred HHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999985 9999999999999
Q ss_pred EcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 366 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 366 vD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++||++|+|||||||||||++
T Consensus 322 ~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~ 400 (555)
T 1gq2_A 322 VDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSK 400 (555)
T ss_dssp EETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGG
T ss_pred EECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCc
Confidence 999999999996 4999999999987667899999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCcc
Q 007904 446 SECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEE 524 (585)
Q Consensus 446 ~E~tpeda~~wt~Grai~AsGSPf~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~aLA~~v~~~ 524 (585)
+||+||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||++||++++++
T Consensus 401 aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~~~ 480 (555)
T 1gq2_A 401 AECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEE 480 (555)
T ss_dssp CSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCCHH
T ss_pred cCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007904 525 NFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 585 (585)
Q Consensus 525 ~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~GvA~~~~~~~dl~~~i~~~mw~P~Y~~~~ 585 (585)
++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|++++
T Consensus 481 ~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 481 NLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 9999999999999999999999999999999999988788899999999999999999863
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=3.7e-204 Score=1645.22 Aligned_cols=539 Identities=50% Similarity=0.904 Sum_probs=529.9
Q ss_pred cccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhhhhhccc
Q 007904 45 WTISVARDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDN 124 (585)
Q Consensus 45 ~~~~~l~~p~~NKGtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~~ 124 (585)
.|..+|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++|
T Consensus 4 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~ 83 (564)
T 1pj3_A 4 KGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDD 83 (564)
T ss_dssp CSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHHC
T ss_pred chHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhhC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCCCcccccchhh
Q 007904 125 VEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 204 (585)
Q Consensus 125 ~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGK 204 (585)
++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|++||||||||||||||||++||+|||||
T Consensus 84 ~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvGK 163 (564)
T 1pj3_A 84 IESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGK 163 (564)
T ss_dssp HHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHHH
T ss_pred HHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH
Q 007904 205 LALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF 284 (585)
Q Consensus 205 l~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af 284 (585)
++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++|||
T Consensus 164 l~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~af 243 (564)
T 1pj3_A 164 LCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAF 243 (564)
T ss_dssp HHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHH
T ss_pred HHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE
Q 007904 285 ELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC 364 (585)
Q Consensus 285 ~lL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~ 364 (585)
+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+++|+++ |+|+|||++|||
T Consensus 244 ~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i~ 322 (564)
T 1pj3_A 244 RFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKIW 322 (564)
T ss_dssp HHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTEE
T ss_pred HHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 999999999999
Q ss_pred EEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 365 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 365 lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
|||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+||||||||||
T Consensus 323 ~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 402 (564)
T 1pj3_A 323 MFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNP 402 (564)
T ss_dssp EEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred EEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 999999999999435999999999987665 799999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007904 443 TSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 443 t~~~E~tpeda~~wt~Grai~AsGSPf~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~aLA~~v 521 (585)
|+++||+||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||++||+++
T Consensus 403 t~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~v 482 (564)
T 1pj3_A 403 TAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQL 482 (564)
T ss_dssp GGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTTC
T ss_pred CCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCC
Q 007904 522 TEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNY 584 (585)
Q Consensus 522 ~~~~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~GvA~~~~~~~dl~~~i~~~mw~P~Y~~~ 584 (585)
+++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|+++
T Consensus 483 ~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~ 545 (564)
T 1pj3_A 483 TDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSL 545 (564)
T ss_dssp CHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCC
T ss_pred ccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCc
Confidence 999999999999999999999999999999999999998778889999999999999999986
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.7e-204 Score=1650.37 Aligned_cols=538 Identities=47% Similarity=0.858 Sum_probs=530.0
Q ss_pred cccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhhhhhccc
Q 007904 45 WTISVARDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDN 124 (585)
Q Consensus 45 ~~~~~l~~p~~NKGtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~~ 124 (585)
.|..+|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++|
T Consensus 38 ~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyrll~~~ 117 (605)
T 1o0s_A 38 RSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDH 117 (605)
T ss_dssp CHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred chHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhhhhhhC
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEeeCcccccCCCCCCcccccch
Q 007904 125 VEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPV 202 (585)
Q Consensus 125 ~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~i 202 (585)
++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++|+|||.++|++||||||||||||||||++||||||
T Consensus 118 ~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipv 197 (605)
T 1o0s_A 118 VKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPV 197 (605)
T ss_dssp HHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGGGHHHH
T ss_pred HHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCcCccee
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCch
Q 007904 203 GKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN 282 (585)
Q Consensus 203 GKl~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~ 282 (585)
||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++|
T Consensus 198 GKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~p~ 277 (605)
T 1o0s_A 198 GKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPN 277 (605)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHH
T ss_pred eHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCe
Q 007904 283 AFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 362 (585)
Q Consensus 283 af~lL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~ 362 (585)
||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+++|+++ |+|+|||+++
T Consensus 278 af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~ 356 (605)
T 1o0s_A 278 AFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKEEACNR 356 (605)
T ss_dssp HHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHHHHHHT
T ss_pred HHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChhhhhCe
Confidence 999999999999999999999999999999999999999999999999999999999999999999984 9999999999
Q ss_pred EEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 363 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 363 i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++||++|+||||||||||
T Consensus 357 i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 435 (605)
T 1o0s_A 357 IYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNP 435 (605)
T ss_dssp EEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred EEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 999999999999996 4999999999987667899999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007904 443 TSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 522 (585)
Q Consensus 443 t~~~E~tpeda~~wt~Grai~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 522 (585)
|+++||+||||++||+|+|||||||||+||+|+||+++||||||+|+|||||||+++++|++|||+|+++||++||++++
T Consensus 436 t~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aLA~~v~ 515 (605)
T 1o0s_A 436 TSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVT 515 (605)
T ss_dssp GGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHHHHTCC
T ss_pred CCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCC
Q 007904 523 EENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNY 584 (585)
Q Consensus 523 ~~~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~GvA~~~~~~~dl~~~i~~~mw~P~Y~~~ 584 (585)
++++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|+++
T Consensus 516 ~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~ 577 (605)
T 1o0s_A 516 EDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEEL 577 (605)
T ss_dssp HHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCC
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCcc
Confidence 99999999999999999999999999999999999998878889999999999999999986
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-121 Score=979.60 Aligned_cols=380 Identities=32% Similarity=0.409 Sum_probs=345.0
Q ss_pred cccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCCC-cccccchhh
Q 007904 126 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGIPVGK 204 (585)
Q Consensus 126 ~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~iGK 204 (585)
.+.|||+||||||++|++|+ +|++++++++.+| ++|+|||||||||||||+|+ +||||||||
T Consensus 58 ~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGK 120 (487)
T 3nv9_A 58 FNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGK 120 (487)
T ss_dssp GGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHH
T ss_pred HHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhH
Confidence 34599999999999999986 4677778777666 48999999999999999999 599999999
Q ss_pred HHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH
Q 007904 205 LALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF 284 (585)
Q Consensus 205 l~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af 284 (585)
++|||+||||| |||||||+||+| +++|| |+| .|||+++.++||. ||||||++||||
T Consensus 121 l~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------def-ve~v~~~~P~fG~---InlEDf~ap~af 176 (487)
T 3nv9_A 121 ALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAV-IEFVQRIQHTFGA---INLEDISQPNCY 176 (487)
T ss_dssp HHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHH-HHHHHHHGGGCSE---EEECSCCTTHHH
T ss_pred HHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHH-HHHHHHhCCCCCe---ecHhhcCCchHH
Confidence 99999999999 999999999755 45664 343 3566677777766 999999999999
Q ss_pred HHHHHHcC--CCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCe
Q 007904 285 ELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 362 (585)
Q Consensus 285 ~lL~ryr~--~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~ 362 (585)
+||+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. .|+|+ ++
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~ 247 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KK 247 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GG
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----cc
Confidence 99999998 799999999999999999999999999999999999999999999999999985 49986 89
Q ss_pred EEEEcCCCcccCCCccCC-----chhchhhcccc--CCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCc
Q 007904 363 ICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKP 434 (585)
Q Consensus 363 i~lvD~~GLi~~~r~~~l-----~~~k~~fa~~~--~~~~~L~e~v~~vkptvLIG~S~~-~g~Ft~evi~~Ma~~~erP 434 (585)
|||||++|||+++|.+ | .++|.+||++. +...+|+|||+. +|||||+|++ +|+||||||++|+ +||
T Consensus 248 i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~P 321 (487)
T 3nv9_A 248 IVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKP 321 (487)
T ss_dssp EEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSC
T ss_pred EEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCC
Confidence 9999999999999954 6 34667888764 246799999998 7999999976 7999999999996 899
Q ss_pred EEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007904 435 LILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAAS 514 (585)
Q Consensus 435 IIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA 514 (585)
||||||||| +||+||||++ +|+||||||| +++|||+||+|+|||||||++++||++|||+|+++||
T Consensus 322 IIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA 387 (487)
T 3nv9_A 322 IVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAAS 387 (487)
T ss_dssp EEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred EEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHH
Confidence 999999999 7999999998 5999999994 6789999999999999999999999999999999999
Q ss_pred HHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007904 515 EALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCM 576 (585)
Q Consensus 515 ~aLA~~v~~~~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~GvA~~~-~~~~dl~~~i~~~m 576 (585)
++||++++++++.+++|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++++
T Consensus 388 ~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 388 RALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999 799999999999999999999976 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=3.5e-113 Score=905.42 Aligned_cols=361 Identities=29% Similarity=0.420 Sum_probs=334.2
Q ss_pred hhhhhhhcccccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCC
Q 007904 115 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 194 (585)
Q Consensus 115 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 194 (585)
.+++++.+++.+ +|||+||||||++|++|+ + |+++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~---~----------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKH-DLSIAYTPGVASVSSAIA---K----------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHH-HHHHHSTTTTHHHHHHHH---H----------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHH-HCeEEECchHHHHHHHHH---h----------CHHHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 467777788765 589999999999999987 3 455555 7888999999999999999999999
Q ss_pred Cc-ccccchhhHHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCc-ee
Q 007904 195 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 272 (585)
Q Consensus 195 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 272 (585)
++ |||||+||+.||++||||| |+|||||+|| +||||++|++.| |. +.
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCchHHHHHHHHcC--CCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 273 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~--~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
||||||+++|||++|+|||+ ++|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 4999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 427 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~M 427 (585)
|+ ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|+|||+|+ ||+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 75 899999999999999933599999999986432 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCH
Q 007904 428 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 507 (585)
Q Consensus 428 a~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd 507 (585)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++++||++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 8 899999999999 89999999999 99999999 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHc
Q 007904 508 DMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYEL 556 (585)
Q Consensus 508 ~m~~aAA~aLA~~v~~~~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~ 556 (585)
+|+++||++||++++++++.+++|||++++ |+||.+||.||+++|++.
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999764
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.1e-107 Score=862.10 Aligned_cols=354 Identities=31% Similarity=0.442 Sum_probs=332.1
Q ss_pred hhhhhhhcccccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCC
Q 007904 115 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 194 (585)
Q Consensus 115 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 194 (585)
..++++.+++.++ |||+||||||++|++|+ ++| ++++ +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p----------~~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDP----------EKTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCG----------GGHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCH----------HHHH----hhcccCCeEEEEECCccccCCCccc
Confidence 6788899998886 89999999999999987 455 4444 7899999999999999999999999
Q ss_pred Cc-ccccchhhHHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCc-ee
Q 007904 195 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 272 (585)
Q Consensus 195 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 272 (585)
++ |||||+||+.||++||||| ++|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 97 9999999999999999999 9999999996 799999999999 87 88
Q ss_pred eeeecCCCchHHHHHHHHcC--CCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 273 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~--~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
||||||+++|||++|+|||+ +||||||||||||+|++||++||+|++|++++++||||+|||+||+++|++|+..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccC-CchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~-l~~~k~~fa~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~ 426 (585)
|. ++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 73 8999999999999999643 99999999987432 4689999998 899999999 79999999999
Q ss_pred HHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccC
Q 007904 427 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 506 (585)
Q Consensus 427 Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~It 506 (585)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++++||+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 89999999999 99999999 689999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHH
Q 007904 507 DDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 553 (585)
Q Consensus 507 d~m~~aAA~aLA~~v~~~~~~~~~l~P~i~~irevs~~VA~aVa~~A 553 (585)
|+|+++||++||+++ ++.+++|||++++ |+||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 6789999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=8.5e-87 Score=714.50 Aligned_cols=385 Identities=30% Similarity=0.433 Sum_probs=349.5
Q ss_pred hhhhhhhcccccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCC
Q 007904 115 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 194 (585)
Q Consensus 115 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 194 (585)
..++++.+++.+ +|||+||||||++|++|+ +|++++++ |+.++|+++|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 356677777776 589999999999999998 37777774 888899999999999999999999
Q ss_pred Cc-ccccchhhHHHHHHhcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCc-ee
Q 007904 195 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 272 (585)
Q Consensus 195 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 272 (585)
.+ ++|+++||++||++||||| ++|++||+. | .|+|+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcE
Confidence 97 8999999999999999999 999999992 1 578888888766 55 56
Q ss_pred eeeecCCCchHHHHHHHHcC--CCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 273 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~--~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
||||||+.||||++|++|++ ++|+||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|.+.
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999987 7999999999999999999999999999999999999999999999999999863
Q ss_pred hcCCChhhhcCeEEEEc----CCCcccCCCccC---CchhchhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCC
Q 007904 351 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 419 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD----~~GLi~~~r~~~---l~~~k~~fa~~~~---~~~~L~e~v~~vkptvLIG~S~~~-g~F 419 (585)
|+++ ++||++| ++||++++ +. +.+++.+|++... ...+|.|+++. +|+|||+|+.+ |+|
T Consensus 209 --G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 8753 7899999 99999887 24 7778888887432 24689999987 89999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHH
Q 007904 420 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 499 (585)
Q Consensus 420 t~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~ 499 (585)
++++++.|+ ++||||+||||+ +||++++|.+| |++++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999986 899999999999 89999999998 89999999 68999999999999999999999
Q ss_pred hCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccc
Q 007904 500 SGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTP 579 (585)
Q Consensus 500 ~~a~~Itd~m~~aAA~aLA~~v~~~~~~~~~l~P~i~~irevs~~VA~aVa~~A~~~GvA~~~~~~~dl~~~i~~~mw~P 579 (585)
+||++|||+|+++||++||++++++ ..++|||++++ |+||.+||.||+++|+++|+|+..++|+|+.+|+++.||.+
T Consensus 342 ~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~ 418 (439)
T 2dvm_A 342 VRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFY 418 (439)
T ss_dssp TTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhh
Confidence 9999999999999999999999876 78999999999 99999999999999999999987777899999999999987
Q ss_pred CC
Q 007904 580 VY 581 (585)
Q Consensus 580 ~Y 581 (585)
.|
T Consensus 419 ~~ 420 (439)
T 2dvm_A 419 EN 420 (439)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.87 E-value=2.6e-08 Score=107.15 Aligned_cols=168 Identities=11% Similarity=0.179 Sum_probs=124.6
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHHHHH---------------------HHHc-------CCCeee-
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 297 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~lL---------------------~ryr-------~~~~~F- 297 (585)
-+-++|...++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3567888878776542 345677665 44443222221 3443 269999
Q ss_pred ---------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 298 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 298 ---------nDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++++|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 899999999999999765 79999999999999999999999998653 74 5888887
Q ss_pred CCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCC
Q 007904 369 KGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 447 (585)
Q Consensus 369 ~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E 447 (585)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 421 1111211 1123579999986 99999998888999999999997 789999999997 78
Q ss_pred CCHHHH
Q 007904 448 CTAEEA 453 (585)
Q Consensus 448 ~tpeda 453 (585)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887655
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.82 E-value=1.2e-08 Score=109.82 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=105.7
Q ss_pred CCCeee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 007904 292 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 361 (585)
Q Consensus 292 ~~~~~F----------nDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~ 361 (585)
..+|+| .|++.||+-+++.|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 89999999999999964 579999999999999999999999998753 64
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 362 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 362 ~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+++++|++. .+...|. ......+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111121 11123589999986 99999988888999999999996 889999999
Q ss_pred CCCCcCCCCHHHHhc
Q 007904 441 NPTSQSECTAEEAYT 455 (585)
Q Consensus 441 NPt~~~E~tpeda~~ 455 (585)
++. .|+.++.+.+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.43 E-value=6.5e-07 Score=94.85 Aligned_cols=218 Identities=18% Similarity=0.241 Sum_probs=130.2
Q ss_pred CcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCCCc--ccccchhhHHHHHHhcCCCCCceeeEEeccCCCchhcccCc
Q 007904 160 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 237 (585)
Q Consensus 160 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnne~Ll~DP 237 (585)
++..++++.++ ..+|+|.++++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+..
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 45566666654 4689999999999999999875 8889888 66765 2 4677664321
Q ss_pred cccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCC-CchHHHHHHHHc-CCCeeec-cCCC----------ch
Q 007904 238 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYG-TTHLVFN-DDIQ----------GT 304 (585)
Q Consensus 238 ~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~-~~~af~lL~ryr-~~~~~Fn-DDiQ----------GT 304 (585)
.+.++.+++ ...+|-+=..+ ++. +++.++ ..+.+|+ +.+. .+
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 233333322 11222222221 223 333443 4677773 2222 45
Q ss_pred HHHHHHHHHHHHHHh----CC----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 305 ASVVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 305 aaV~lAgll~A~r~~----g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
....+|| .+|++.. ++ .+...+|+|+|+|.+|.++++++... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5555665 4444432 22 25689999999999999999887642 62 588999864
Q ss_pred cccCCCccCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHH
Q 007904 371 LIVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAM 427 (585)
Q Consensus 371 Li~~~r~~~l~~------------~k~~fa~~~~~------~~~L~e~v~~vkptvLIG~S~~~-----g~Ft~evi~~M 427 (585)
-..... ..+.. .+..|++.... ..+|.+.++. .|++|++...+ .+++++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00011111000 0147777775 99999996433 67999999999
Q ss_pred HcCCCCcEEEecCCCC
Q 007904 428 ASFNEKPLILALSNPT 443 (585)
Q Consensus 428 a~~~erPIIFaLSNPt 443 (585)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 6 788999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.88 E-value=6.3e-05 Score=81.46 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=97.9
Q ss_pred CCCeee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 007904 292 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 361 (585)
Q Consensus 292 ~~~~~F----------nDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~ 361 (585)
-.+|+| .|...||+-.++.|+. |.+|..|...+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 5777999999888885 5679999999999999999999999988653 64
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 362 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 362 ~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+++++|++. .....+. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp------------~~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDP------------ICALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSH------------HHHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCc------------chhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 688887631 1111111 11123479999986 99999998888899999999996 788998888
Q ss_pred CCCCcCCCCHHHH
Q 007904 441 NPTSQSECTAEEA 453 (585)
Q Consensus 441 NPt~~~E~tpeda 453 (585)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 56665444
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.79 E-value=5.9e-05 Score=82.33 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=100.8
Q ss_pred CCCeee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 007904 292 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 361 (585)
Q Consensus 292 ~~~~~F----------nDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~ 361 (585)
-.+|+| .|+++||+-.++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 379999 6889999999999886 789999999999999999888888888765 373
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 362 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 362 ~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 0 100 11111123467777765 89999999888999999999885 7889999999
Q ss_pred CCCcCCCCHHHHhcc
Q 007904 442 PTSQSECTAEEAYTW 456 (585)
Q Consensus 442 Pt~~~E~tpeda~~w 456 (585)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.30 E-value=0.00082 Score=70.32 Aligned_cols=225 Identities=15% Similarity=0.149 Sum_probs=121.6
Q ss_pred CcchHHHHHhcCCCCCeeEEEEeeCcccccCCCCCCc--ccccchhhHHHHHHhcCCCCCceeeEEeccCCC-----chh
Q 007904 160 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQ 232 (585)
Q Consensus 160 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTn-----ne~ 232 (585)
.+..++++.+. ..+|+|.++++...|+.|.... |..|..++-.++ ++.| |+|.+.+. .++
T Consensus 19 ~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 34556666553 5789999999999999998764 778887776665 4444 56665432 111
Q ss_pred cc----cCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCc-hHHHHHHHHcCCCeeeccCCCchHHH
Q 007904 233 LL----KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH-NAFELLAKYGTTHLVFNDDIQGTASV 307 (585)
Q Consensus 233 Ll----~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~-~af~lL~ryr~~~~~FnDDiQGTaaV 307 (585)
.+ ..-.+++.-|.- ++. +.++++.+ -|- .++.+|-+... .+. .+++|+ ...
T Consensus 86 ~i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~~~--------~l~~l~------~~a 141 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISRAQ--------SMDILS------SQS 141 (384)
T ss_dssp GGGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGGGG--------GGCHHH------HHH
T ss_pred HHHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccccc--------ccchhh------HHH
Confidence 11 112222322221 111 11222222 111 12233222110 000 111111 111
Q ss_pred HHH---HHHHHHHHhCC----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccC
Q 007904 308 VLA---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS 374 (585)
Q Consensus 308 ~lA---gll~A~r~~g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~ 374 (585)
.+| +++.+.+..++ .+...+|+|+|+|.+|.+++.++.. .|. +++++|++.-
T Consensus 142 ~~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~--- 206 (384)
T 1l7d_A 142 NLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA--- 206 (384)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST---
T ss_pred HHHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH---
Confidence 223 55666665553 5788999999999999999988764 363 4899998632
Q ss_pred CCccCCchhc-----------------hhhccccC------CCCCHHHHhcccCCcEEEecc---C--CCCCCCHHHHHH
Q 007904 375 SRKDSLQHFK-----------------KPWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEA 426 (585)
Q Consensus 375 ~r~~~l~~~k-----------------~~fa~~~~------~~~~L~e~v~~vkptvLIG~S---~--~~g~Ft~evi~~ 426 (585)
+.+.+...- -.|++... ....|.+.++. .|++|.++ + .+.+++++.++.
T Consensus 207 -~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~ 283 (384)
T 1l7d_A 207 -TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTK 283 (384)
T ss_dssp -THHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTT
T ss_pred -HHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhc
Confidence 100000000 01111100 00126777765 99999988 3 235789999999
Q ss_pred HHcCCCCcEEEecCCC
Q 007904 427 MASFNEKPLILALSNP 442 (585)
Q Consensus 427 Ma~~~erPIIFaLSNP 442 (585)
|. +..+|+-+|-+
T Consensus 284 mk---~g~vivdva~~ 296 (384)
T 1l7d_A 284 MK---PGSVIIDLAVE 296 (384)
T ss_dssp SC---TTCEEEETTGG
T ss_pred CC---CCCEEEEEecC
Confidence 96 67889988854
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.06 E-value=0.00063 Score=72.68 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=72.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc--------------hhchhh
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 387 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~--------------~~k~~f 387 (585)
.+...||+|+|+|.+|.++|+++... |. +++++|++.-......+ +. ..+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 36789999999999999999988653 63 68999997532111000 00 001123
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCC-CCCcCCCC
Q 007904 388 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 449 (585)
Q Consensus 388 a~~~~~------~~~L~e~v~~vkptvLIG~S~~-----~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt~~~E~t 449 (585)
++...+ ..+|.|+++. .|++|++... +.+||+++++.|. +..||+-+|- |-...|.|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 332111 1368899987 9999998533 4589999999996 8899999995 33445555
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.63 E-value=0.0022 Score=68.03 Aligned_cols=104 Identities=22% Similarity=0.201 Sum_probs=67.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCcc------CCc---hhchhhccc---
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHE--- 390 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~------~l~---~~k~~fa~~--- 390 (585)
+...||+|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .+. .....|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988764 63 58999987421100000 000 000112210
Q ss_pred ---cCCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 391 ---HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 391 ---~~~~~~L~e~v~~vkptvLIG~S~~-----~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 0012368888876 9999997533 3579999999996 788999998543
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.51 E-value=0.016 Score=58.02 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 382 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~ 382 (585)
.+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+... |. +++++|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 344555555555666778899999999999999999999988642 63 688888742 11 110
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCcCCCCHHHH
Q 007904 383 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEA 453 (585)
Q Consensus 383 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt~~~E~tpeda 453 (585)
.+ .+--..-...+|.|+++. .|++|-.. +.+.++++.++.|. +..+|+=+|. |. ++..+.+
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 00 110000012367788875 99999765 45799999999885 6678888884 44 3445444
No 17
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.49 E-value=0.14 Score=55.47 Aligned_cols=190 Identities=16% Similarity=0.173 Sum_probs=128.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH--HHHHHHc---CCCe-ee----------ccCCCchHHHHHH
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTHL-VF----------NDDIQGTASVVLA 310 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~lL~ryr---~~~~-~F----------nDDiQGTaaV~lA 310 (585)
.+..+...|...||..+.+-.||..=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 34567778888899999888899999999999864322 2455664 2221 11 1122346666777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh----
Q 007904 311 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 386 (585)
Q Consensus 311 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~---- 386 (585)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7888888889999999999999999999999998764 63 3345899999998754 34432221
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCcCCCCHHH
Q 007904 387 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 452 (585)
Q Consensus 387 -----------fa~~~~~~~--~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt~~~E~tped 452 (585)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001100 1112 33568999998887 67999999999843 25689999998 763 55 456
Q ss_pred Hhc
Q 007904 453 AYT 455 (585)
Q Consensus 453 a~~ 455 (585)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 18
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.48 E-value=0.026 Score=60.69 Aligned_cols=178 Identities=19% Similarity=0.177 Sum_probs=126.6
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH--HHHHHHcC---C--Ceee----------ccCCCchHHHHH
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVF----------NDDIQGTASVVL 309 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~lL~ryr~---~--~~~F----------nDDiQGTaaV~l 309 (585)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. -+.+.|+. . -.++ .+--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 44566777889999999998899888888999763222 25567742 1 0122 233455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhc-hhhc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 388 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k-~~fa 388 (585)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999999764 63 4467999999999764 343321 1121
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 389 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 389 ~~~~-------~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
.... ..-+-.+ +-.++.||||=++.+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 345689999988875 79999988876 6788888888 65
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.28 E-value=0.034 Score=59.72 Aligned_cols=186 Identities=15% Similarity=0.134 Sum_probs=127.3
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchH--HHHHHHHcC---C--Ceee----------ccCCCchHHHHH
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVL 309 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~lL~ryr~---~--~~~F----------nDDiQGTaaV~l 309 (585)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3456677889999999999999999999999987532 225666632 1 0111 222334766667
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE-EEcCCCcccCCCccCCchhch-hh
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PW 387 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~~l~~~k~-~f 387 (585)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++.. .++..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788889999999999999999999999999998875 36 3566 999999998764 3433221 11
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCcCCCCHHHHhc
Q 007904 388 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 455 (585)
Q Consensus 388 a~~~~~~~----~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt~~~E~tpeda~~ 455 (585)
........ +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 1112 34578999998876 669999888877 5679999998 663 44 344444
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.28 E-value=0.0086 Score=61.76 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=78.4
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++-.++..+.++...++||+|+| ..|.-+|.++... | .++.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 45567888999999999999999999999999 5799999888752 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468889987 99999999999999999985 45577766654
No 21
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.11 E-value=0.18 Score=54.71 Aligned_cols=182 Identities=15% Similarity=0.090 Sum_probs=125.2
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH--HHHHHH---cCC-Ceee----------ccCCCchHHHHHH
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKY---GTT-HLVF----------NDDIQGTASVVLA 310 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~lL~ry---r~~-~~~F----------nDDiQGTaaV~lA 310 (585)
.+..|-..|...|+..+.+..||+.=|--.|++..-.- -+.+.| +.. -+|| .+.-..||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 46677888999999999999999999999999754321 134444 332 2232 1233347777778
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc
Q 007904 311 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 390 (585)
Q Consensus 311 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~ 390 (585)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+-|++|-|++.. .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999998763 63 5566788999988753 354433221110
Q ss_pred --cCCCCCHHH-------------HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 391 --HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 391 --~~~~~~L~e-------------~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
......+.+ -+-.++.|||+=+..+ +.+|++-++.+.+. .-.+|.-=+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 000111111 1334689999988875 68999999998532 2357777777 65
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.11 E-value=0.013 Score=59.92 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------ 194 (285)
T 3l07_A 139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------ 194 (285)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 344578888999999999999999999999976 899999998752 52 47777653
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 195 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ------------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ------------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1358889987 99999999999999998884 444555443
No 23
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.85 E-value=0.021 Score=58.48 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch
Q 007904 304 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 382 (585)
Q Consensus 304 TaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~ 382 (585)
-.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678889999999999999999999999876 899999998752 52 47788752
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 383 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 383 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVg 232 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVG 232 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEec
Confidence 1358888987 99999999999999999885 445665553
No 24
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.78 E-value=0.02 Score=57.87 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 388 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa 388 (585)
-.|++.+++..+..+++.+++|+|||.+|.+++..|.+ .|. ++|+++|+. .++ .......+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 45788899888889999999999999777777666654 375 689999874 221 111111221
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 007904 389 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 416 (585)
Q Consensus 389 ~~-------~~~~~~L~e~v~~vkptvLIG~S~~~ 416 (585)
.. .-+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888876 89999887654
No 25
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.74 E-value=0.021 Score=58.20 Aligned_cols=83 Identities=11% Similarity=0.205 Sum_probs=68.6
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++..++..+ |+..++|++|+| ..|..+|.+|... | ..+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445678889999999998 999999999998 4899999998752 5 357788652
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 425 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~ 425 (585)
..+|.+.++. +|++|+..+.++.+++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1468899988 99999999999999998874
No 26
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.72 E-value=0.018 Score=59.00 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=76.5
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++... | ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 556778889999999999999999999999995 699999888652 4 468888642
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999998874 44455555543
No 27
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.72 E-value=0.14 Score=55.69 Aligned_cols=179 Identities=15% Similarity=0.158 Sum_probs=120.9
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchH--HHHHHHHcC---C-Ceee----------ccCCCchHHHHHHH
Q 007904 248 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 311 (585)
Q Consensus 248 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~lL~ryr~---~-~~~F----------nDDiQGTaaV~lAg 311 (585)
+..+...|-..||..+.+..||..=|-=+|++..-. --+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 455666777889999998889998899999986422 125566642 1 1111 11223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE-EEcCCCcccCCCccCCchhc------
Q 007904 312 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK------ 384 (585)
Q Consensus 312 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~~l~~~k------ 384 (585)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++...
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999998763 63 455 889888888753 342221
Q ss_pred ---------hhhccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 385 ---------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 385 ---------~~fa~~~~~~~--~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ |.-.||.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 12221000000 001223 568999998885 67999999999854 45679999998 65
No 28
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.61 E-value=0.027 Score=57.73 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=75.4
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+.+++++
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----g-------AtVtv~hs~------------ 194 (286)
T 4a5o_A 139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----G-------CTVTVTHRF------------ 194 (286)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 334577889999999999999999999999875 899999998752 5 257777542
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEec-CCCC
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 443 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaL-SNPt 443 (585)
..+|.+.++. +|++|+..+.++.++.++|+ +.-+|+=+ +||.
T Consensus 195 ------------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ------------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ------------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ------------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1258888987 99999999999999998884 44455554 3443
No 29
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.45 E-value=0.028 Score=58.32 Aligned_cols=114 Identities=19% Similarity=0.257 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHH---------hCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCC
Q 007904 306 SVVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS 375 (585)
Q Consensus 306 aV~lAgll~A~r~---------~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~ 375 (585)
-+|-.|.+-.++. .|.++...++||+|+|. .|.-+|.++... | .+++++|+...-...
T Consensus 149 PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ 216 (320)
T 1edz_A 149 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFT 216 (320)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEE
T ss_pred CCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHh
Confidence 3444555666666 68899999999999995 598888888642 4 358999987655555
Q ss_pred CccCCchhchhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 376 RKDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 376 r~~~l~~~k~~fa~~~~~---~--~~L~e~v~~vkptvLIG~S~~~g~-Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
|.+.+... ++.... . .+|.+.++. +|++|+..+.++. +|.++|+ +.-+|+=++.|-
T Consensus 217 ra~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 217 RGESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp SCCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 54333310 111100 1 469999998 9999999999887 9998874 334666666553
No 30
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.41 E-value=0.14 Score=55.00 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=112.1
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchH--HHHHHHHc---CCC---eee----------ccCCCchHHHHH
Q 007904 248 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTH---LVF----------NDDIQGTASVVL 309 (585)
Q Consensus 248 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~lL~ryr---~~~---~~F----------nDDiQGTaaV~l 309 (585)
+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 445677789999999999999999999999987522 23566764 211 222 122234666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC-----CcccCCCccCCchhc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHFK 384 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~-----GLi~~~r~~~l~~~k 384 (585)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++.. .++...
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~~ 263 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFKE 263 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHHH
Confidence 6778888899999999999999999999999998876 363 334489999 9999764 343221
Q ss_pred h-hhccccCCCC--------CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 385 K-PWAHEHEPVN--------NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 385 ~-~fa~~~~~~~--------~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
. .+......+. +-.+ +-.++.||||=++. ++.+|++-.+.+ .-.+|.-=+| |+
T Consensus 264 l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 264 LLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1 1111111110 1112 23457788886655 557787777766 4566766666 55
No 31
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.38 E-value=0.031 Score=57.63 Aligned_cols=96 Identities=23% Similarity=0.304 Sum_probs=75.6
Q ss_pred CCchHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccC
Q 007904 301 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 379 (585)
Q Consensus 301 iQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~ 379 (585)
..|-.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... | ..+.+++++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~-------T-- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG-------T-- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------S--
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------C--
Confidence 34555678889999999999999999999999876 899999998762 5 258888762 1
Q ss_pred CchhchhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 380 LQHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 380 l~~~k~~fa~~~~~~~~L~--e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.+|. +.++. +|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88887 99999999999999998874 445665553
No 32
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.36 E-value=0.28 Score=52.96 Aligned_cols=178 Identities=17% Similarity=0.165 Sum_probs=121.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCch--HHHHHHHHcC---C--Ceee----------ccCCCchHHHHH
Q 007904 247 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 309 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~lL~ryr~---~--~~~F----------nDDiQGTaaV~l 309 (585)
.+..|-..|...|++++.+.-||+.-|-=+|++..- ---+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345667788999999999999999999999998742 1225666632 1 1222 223334666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch-hhc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA 388 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~-~fa 388 (585)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++..+ ++.... .+.
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~ 286 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAG--IDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTC--CCHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCC--CCHHHHHHHH
Confidence 77788889999999999999999999999999988763 63 33449999999987652 322211 111
Q ss_pred cccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 389 HEHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 389 ~~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
.....+ -+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |+
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 111100 12334 44578999998776 568888887776 5678888888 66
No 33
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.16 E-value=0.01 Score=52.84 Aligned_cols=71 Identities=15% Similarity=0.315 Sum_probs=43.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
..+|+|+|+|..|..++..+.. .|. + ++++|+. ..+ .....+.|.-+.....++.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~~a~~~~~~~~~~~~~~~~~~~- 80 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRAFAEKYEYEYVLINDIDSLIKN- 80 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHHHHHHHTCEEEECSCHHHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHHHHHHhCCceEeecCHHHHhcC-
Confidence 7899999999999888776643 253 4 8888873 111 111112221111134578888876
Q ss_pred CCcEEEeccCCC
Q 007904 405 KPTILIGSSGVG 416 (585)
Q Consensus 405 kptvLIG~S~~~ 416 (585)
.|++|-+++.+
T Consensus 81 -~Divi~at~~~ 91 (144)
T 3oj0_A 81 -NDVIITATSSK 91 (144)
T ss_dssp -CSEEEECSCCS
T ss_pred -CCEEEEeCCCC
Confidence 88888766543
No 34
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.15 E-value=0.11 Score=51.87 Aligned_cols=106 Identities=16% Similarity=0.256 Sum_probs=68.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
..||.|+|+|..|.++|..+... |.. ..+++++|++ . +.+...+..| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 652 2478888874 1 1122222212 01112578899886
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCcCCCCHHHHhccc
Q 007904 405 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTSQSECTAEEAYTWS 457 (585)
Q Consensus 405 kptvLIG~S~~~g~Ft~evi~~Ma~~--~erPIIFaLSNPt~~~E~tpeda~~wt 457 (585)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .+..-+|.
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l 110 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWL 110 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHH
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHc
Confidence 88877 34444 4568888888765 56668888888774 34444554
No 35
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.10 E-value=0.022 Score=57.54 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 388 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa 388 (585)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.+ .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 44677888888999999999999999888888777654 375 678999885 222222221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCC
Q 007904 389 HEHEPVNNLLDAVKVIKPTILIGSSGVG 416 (585)
Q Consensus 389 ~~~~~~~~L~e~v~~vkptvLIG~S~~~ 416 (585)
. ....++.++++. +|++|-++..+
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345566665 89999776543
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.85 E-value=0.12 Score=56.35 Aligned_cols=123 Identities=15% Similarity=0.199 Sum_probs=87.5
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccC
Q 007904 300 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 379 (585)
Q Consensus 300 DiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~ 379 (585)
.+.|+......|+ .+.+|..+...+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3444444555562 25678899999999999999999999998753 63 6888887521 00
Q ss_pred CchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhc
Q 007904 380 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 455 (585)
Q Consensus 380 l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~ 455 (585)
+ ......-...+|.|+++. .|++|.+....++++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 294 ~-----~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 I-----QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp H-----HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred H-----HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 0 011111112479999986 99999998778899999999885 667888788755 6777777666
No 37
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.76 E-value=0.06 Score=55.04 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=76.2
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.+|.. .|. -..+++++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 555677888999999999999999999999996 58888877753 220 1457777542
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999985 44577766655
No 38
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.75 E-value=0.16 Score=50.46 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=57.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh-------hccc--------
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 390 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~-------fa~~-------- 390 (585)
.||.|+|+|..|.+||..+..+ |. +++++|++- . .+...+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998763 64 688888741 1 11111111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 391 -------HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 391 -------~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
.....++.|+++. .|++|=+-...-...+++++.+.++...-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123578888876 89888433211114566777777665544444 3454443
No 39
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.72 E-value=0.19 Score=52.92 Aligned_cols=102 Identities=16% Similarity=0.307 Sum_probs=62.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
.+.+.+++|+|+|..|..++..+... |. ++++++|+. ..+ .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999998888653 75 679998874 111 1111111211111124677777
Q ss_pred cccCCcEEEeccCCC-CCCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 007904 402 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 443 (585)
Q Consensus 402 ~~vkptvLIG~S~~~-g~Ft~evi~~--Ma-~~~erPIIFaLSNPt 443 (585)
.. .|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 64 89999877654 3567888887 43 222334555566553
No 40
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.47 E-value=0.039 Score=55.87 Aligned_cols=87 Identities=23% Similarity=0.273 Sum_probs=56.3
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc
Q 007904 310 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 388 (585)
Q Consensus 310 Agll~A~r~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa 388 (585)
.|++.+++..+ ..++..+++|+|||.+|..+|..|.+ .|. ++++++|+. ..+ .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 679999874 111 111111111
Q ss_pred cccCCC---CCHHHHhcccCCcEEEeccCCC
Q 007904 389 HEHEPV---NNLLDAVKVIKPTILIGSSGVG 416 (585)
Q Consensus 389 ~~~~~~---~~L~e~v~~vkptvLIG~S~~~ 416 (585)
...... .++.++++. +|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566655 99999887755
No 41
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.44 E-value=0.34 Score=51.98 Aligned_cols=177 Identities=19% Similarity=0.181 Sum_probs=117.0
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHHH---HHHHHcC---C--CeeeccCC----------CchHHHHH
Q 007904 248 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVFNDDI----------QGTASVVL 309 (585)
Q Consensus 248 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---lL~ryr~---~--~~~FnDDi----------QGTaaV~l 309 (585)
+.+|-..|...|++++.+.-||+.-|-=+|++.. ... +.+.|+. . ..++.-+- .-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678899999999999899999999999873 222 3456631 1 12222221 22555555
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE-EEcCCCcccCCCccC---Cchhch
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDS---LQHFKK 385 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~~---l~~~k~ 385 (585)
-++-.+++..|.+|++.+|+|.|.|..|...|++|.+ .|. +++ +.|++|-|++..+=+ +..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 5677788889999999999999999999999988765 363 455 999999998764211 111221
Q ss_pred hhcc-------cc---CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 386 PWAH-------EH---EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 386 ~fa~-------~~---~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
.+-. .. ....+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1100 00 11101123 34468999997775 668888777766 5678888888 65
No 42
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.44 E-value=0.18 Score=52.89 Aligned_cols=167 Identities=19% Similarity=0.189 Sum_probs=108.1
Q ss_pred hhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchH--HHHHHHHcC---CCeeec---cCCCchHHHHHHHHHHHHHHhC
Q 007904 249 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVFN---DDIQGTASVVLAGVVAALKLIG 320 (585)
Q Consensus 249 g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~lL~ryr~---~~~~Fn---DDiQGTaaV~lAgll~A~r~~g 320 (585)
..+-++++..|.+++.+..|+ -|-=+|++..-. --+.+.|+- +-..+. |--.-||-=+.-++-.+++..|
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 345567788888888887765 578899975332 225666652 111111 1111255555667778888889
Q ss_pred C-CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccC-CCCCHH
Q 007904 321 G-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLL 398 (585)
Q Consensus 321 ~-~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~-~~~~L~ 398 (585)
. .|++.+|+|.|.|..|..+|+.+.+ .|. ++++.|++ ..+ ..|+.... ..-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999988764 373 67788874 111 22322110 112444
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCcCC
Q 007904 399 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSE 447 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt~~~E 447 (585)
|... ++.|+|+=++ ..+.++++-++.| +-.||.--+| |+..+|
T Consensus 226 ell~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 226 DVLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIADEA 269 (355)
T ss_dssp GGGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBCSHH
T ss_pred Hhhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCCCHH
Confidence 5443 5789999654 4679999999999 3568888887 653334
No 43
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.31 E-value=0.06 Score=53.54 Aligned_cols=144 Identities=19% Similarity=0.299 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhcC--------CceeeeeecCCCchHHHHH--HHHcCCCeeeccCCCchHHHHHHHHHHHHHHhCCCccc
Q 007904 256 LDEFMSAVKQNYG--------EKVLIQFEDFANHNAFELL--AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 325 (585)
Q Consensus 256 idefv~av~~~fG--------p~~lIq~EDf~~~~af~lL--~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d 325 (585)
+++|++.++..|. ...++.+=|- ++.|..+= +-...+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 5677776664442 1234555555 66665440 000001 3455552 3677777654 5678
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
+++|+|||.+|.+++..|.+ .|. ++|+++|+. .++.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999888887765 375 679999884 222222221 1110 123457777776
Q ss_pred CcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecC
Q 007904 406 PTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 406 ptvLIG~S~~~-----g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|-++..+ ..+.++.++ +..+|+-++
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Div 200 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVI 200 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEee
Confidence 99999765432 124444432 456666654
No 44
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.25 E-value=0.15 Score=51.15 Aligned_cols=100 Identities=22% Similarity=0.248 Sum_probs=68.3
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCC
Q 007904 316 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 395 (585)
Q Consensus 316 ~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~ 395 (585)
++..+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+ .+--..-...
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~-~~g~~~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARIT-EMGLVPFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHH-HTTCEEEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHH-HCCCeEEchh
Confidence 34567899999999999999999999988642 63 688888741 11 11100 0100000124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 396 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 396 ~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
+|.|+++. .|++|-+.. .+.++++.++.|. +..+|+=+|.
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~ 247 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLAS 247 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSS
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeC
Confidence 68888875 999997665 4799999888774 5678888886
No 45
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.77 E-value=0.7 Score=48.85 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=83.3
Q ss_pred CCeeeccCCC---chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 293 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 293 ~~~~FnDDiQ---GTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+.+.|.--- .+|=-+++.+|+..|..|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 4555554322 234458999999999999999999999999999999999988653 74 57888763
Q ss_pred CcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 370 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 370 GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S---~-----~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
.- . .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~----------~--~~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ----------A--RE---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH----------H--HS---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh----------h--hc---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 00 01123579999986 89888542 1 34689999999885 5678877774
No 46
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.54 E-value=0.14 Score=52.96 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=62.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHH
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 398 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~ 398 (585)
++..+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888765 26 2 68888874 111 222222222210 0112466
Q ss_pred HHhcccCCcEEEeccCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 007904 399 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~-----Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
+.++ +.|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999998876652 5888888885 45577777754
No 47
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.53 E-value=1.5 Score=47.41 Aligned_cols=178 Identities=17% Similarity=0.189 Sum_probs=117.9
Q ss_pred hhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHH--HHHHHHc---CC--Ceeecc----------CCCchHHHHHHH
Q 007904 249 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVFND----------DIQGTASVVLAG 311 (585)
Q Consensus 249 g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~lL~ryr---~~--~~~FnD----------DiQGTaaV~lAg 311 (585)
..+-..|-..||..+.+..||..-|-=+|++..-.. -+.+.|+ +. .-++-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 456677778899999888999999999999876221 1344443 21 122211 113366556667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCC-chh-------
Q 007904 312 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 383 (585)
Q Consensus 312 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l-~~~------- 383 (585)
+-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999888764 63 3344789999888753 34 221
Q ss_pred -c-------hhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 384 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 384 -k-------~~fa~~--~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
+ ..|... .+.. +-.+.. .++.|+|+=+.. ++.+|++-.+.+-+ |...||.-=+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e~~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEKPW-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCCGG-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEe-Cchhhh-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 0000 001222 568999997775 67999999999854 34578888888 65
No 48
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.36 E-value=0.15 Score=51.54 Aligned_cols=101 Identities=12% Similarity=0.268 Sum_probs=64.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCC--ch-hchhhccccCC---CCCHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL--QH-FKKPWAHEHEP---VNNLLD 399 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l--~~-~k~~fa~~~~~---~~~L~e 399 (585)
.||.|+|||+.|.++|..+... |+ .+++++|.+- ++-+.+ .- +...+...... ..++ +
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHSMVMFGSTSKVIGTDDY-A 68 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHHHHHTCCCCEEEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 5899999999999999998764 65 2599999852 111100 00 00011110111 1456 7
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 400 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
+++. +|++|=+.+.+.. +.+++++.+.++++.-||+-.|||..
T Consensus 69 a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 69 DISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 7775 8988865543321 24678888888899999999999974
No 49
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.31 E-value=0.12 Score=52.47 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|++.+++..|.++++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877765 375 689999874
No 50
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.27 E-value=0.11 Score=52.33 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=63.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch---hchhhccccCC--CCCHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAHEHEP--VNNLLDA 400 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~---~k~~fa~~~~~--~~~L~e~ 400 (585)
.||.|+|||+.|..+|..|... |+ ...++++|++- ++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988764 64 25799999851 11111110 00011100001 1456 66
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 401 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 401 v~~vkptvLIG~S~~~-------g~F-----------t~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
++. .|++|=+...+ |.. -+++++.|.++++..+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 765 89888554432 211 1688999988888888888999984
No 51
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.23 E-value=0.14 Score=52.53 Aligned_cols=106 Identities=18% Similarity=0.286 Sum_probs=67.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCC---CCHHHHhc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 402 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~---~~L~e~v~ 402 (585)
.||.|+|||+.|.++|.+|... |+ -+++++|.+-=..+.-...+.+. ..+......+ .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHV-TSVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHH-HHHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhh-hhccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999998763 64 13999998621000000001111 1111111122 57888888
Q ss_pred ccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 403 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 403 ~vkptvLIG~S~~~---g~----------------Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
+ .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 7 89988554333 32 147888999999988898888999843
No 52
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.22 E-value=0.2 Score=51.31 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=70.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh-------hccc-------
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 390 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~-------fa~~------- 390 (585)
-.||.|+|+|..|.+||..+..+ |. +++++|++- + .+...+.. +...
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998764 74 588888741 1 11111000 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcE
Q 007904 391 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 461 (585)
Q Consensus 391 --------~~~~~~L~e~v~~vkptvLIG~S~~~g-~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Gra 461 (585)
.....++.|+++. .|++|= +.+.. .+.+++++.+.++...-.|++ ||=++ .++.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVie-avpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQE-CVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEEE-CCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEEE-eccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0113579899986 888873 33222 255677888887765544554 44222 44555555443221
Q ss_pred EEecCCCCCcce
Q 007904 462 IFASGSPFDPFE 473 (585)
Q Consensus 462 i~AsGSPf~pv~ 473 (585)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 123344777663
No 53
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.20 E-value=0.29 Score=49.89 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=65.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 402 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~ 402 (585)
||+|+|| |..|..++.+|+. .|+ ...++++|.+-. .+...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 355 357999998641 1100012111100 0 0001 135888898
Q ss_pred ccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 403 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 403 ~vkptvLIG~S~~~---g-----------~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+ .|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 89988554443 2 24667888888999998988899998
No 54
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.17 E-value=0.3 Score=53.45 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=73.6
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCC
Q 007904 317 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN 396 (585)
Q Consensus 317 r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~ 396 (585)
+.+|..+...+++|+|.|..|.++|+.+... |+ +++.+|++.. +. +.. ....-...+
T Consensus 269 ~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----~~--~~a-----~~~G~~~~~ 325 (494)
T 3d64_A 269 RATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----CA--LQA-----AMEGYRVVT 325 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----HH--HHH-----HTTTCEECC
T ss_pred hccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----hH--HHH-----HHcCCEeCC
Confidence 5688999999999999999999999988642 63 6888887521 00 000 011111247
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 397 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
|.|+++. .|++|.+....++++++.++.|. +.-||.=.|...
T Consensus 326 l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 326 MEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 9999986 99999998777899999999995 667888788754
No 55
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.14 E-value=0.13 Score=51.96 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=61.1
Q ss_pred HHHHHHHHHH-hcCCceeeeeecCCCchHHHHHHHHcC--------CCeeeccC--CCc--hHHHHHHHHHHHHHHhCCC
Q 007904 256 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQG--TASVVLAGVVAALKLIGGT 322 (585)
Q Consensus 256 idefv~av~~-~fGp~~lIq~EDf~~~~af~lL~ryr~--------~~~~FnDD--iQG--TaaV~lAgll~A~r~~g~~ 322 (585)
+.++++.++. .|.. ++.--=-...++++||+..+ +..++++| ..| |- -.|++.+++..|.+
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~ 123 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVL 123 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCC
Confidence 5667776653 4533 33332233445555554321 22344444 233 33 46788888888999
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+++.+++|+|||.+|.+++..|.+ .|. ++++++++.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999999877777766654 375 689999884
No 56
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.13 E-value=0.15 Score=52.59 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-.|++.+++..|..+++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 375 689999885
No 57
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.12 E-value=0.23 Score=49.32 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=56.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
.|++.+++..|..++..+++|+|+|.+|..+|..|.+. |. +++++|+. .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998888653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007904 390 EHEPVNNLLDAVKVIKPTILIGSSGVG 416 (585)
Q Consensus 390 ~~~~~~~L~e~v~~vkptvLIG~S~~~ 416 (585)
.....++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0112267787775 99999766544
No 58
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.12 E-value=0.16 Score=55.14 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=22.0
Q ss_pred HHHHHHHHcCCCCcEEEecCCCC
Q 007904 421 KEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 421 ~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.++++.|.++|+.-+++=.|||.
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~ 162 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV 162 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH
T ss_pred HHHHHHHHhhCCCeEEEEecChH
Confidence 68999999999999999999998
No 59
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.10 E-value=0.14 Score=52.63 Aligned_cols=49 Identities=33% Similarity=0.443 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|++.+++..|..+++.+++|+|||.+|.+|+..|.+ .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 5678888888899999999999999887777776654 375 689999884
No 60
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.08 E-value=0.91 Score=46.22 Aligned_cols=121 Identities=15% Similarity=0.090 Sum_probs=81.6
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhc
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 352 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 352 (585)
..+.+.|----. +|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 356666643322 334478888888775 35689999999999999999999988753
Q ss_pred CCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 007904 353 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 428 (585)
Q Consensus 353 Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~~Ma 428 (585)
|+ +++.+|+.. . .. ......-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~------~~--~~~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I------RE--KAEKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C------HH--HHHHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c------hh--HHHhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888741 1 10 000000011378899886 898885432 34678899999885
Q ss_pred cCCCCcEEEecCC
Q 007904 429 SFNEKPLILALSN 441 (585)
Q Consensus 429 ~~~erPIIFaLSN 441 (585)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887776
No 61
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=92.97 E-value=1.9 Score=46.15 Aligned_cols=178 Identities=17% Similarity=0.174 Sum_probs=118.7
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCch--HHHHHHHHc---CC--Ceeecc----------CCCchHHHHHH
Q 007904 248 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVFND----------DIQGTASVVLA 310 (585)
Q Consensus 248 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~lL~ryr---~~--~~~FnD----------DiQGTaaV~lA 310 (585)
+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++-- --.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566788899999999988999989999998652 112455663 11 122322 12236655666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhc-hhhcc
Q 007904 311 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 389 (585)
Q Consensus 311 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k-~~fa~ 389 (585)
++-.+++..|.+++..||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++.. .++... ..+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPE--GFDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCC--CCCHHHHHHHHH
Confidence 777888889999999999999999999999988865 0253 3344899999988764 243321 11211
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 390 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 390 ~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
....+ -+-.| +-.++.|+||=++. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11111 12333 45578999997776 568888887776 5668888887 65
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.81 E-value=0.14 Score=51.57 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=61.2
Q ss_pred HHHHHHHHHH-hcCCceeeeeecCCCchHHHHHHHHcC------CC-eeeccC--CCchHHHHHHHHHHH-HHHhCCCcc
Q 007904 256 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT------TH-LVFNDD--IQGTASVVLAGVVAA-LKLIGGTLA 324 (585)
Q Consensus 256 idefv~av~~-~fGp~~lIq~EDf~~~~af~lL~ryr~------~~-~~FnDD--iQGTaaV~lAgll~A-~r~~g~~l~ 324 (585)
+.++++.++. .|+. ++.----...++++||+..+ -+ ++.++| ..|.-.= -.|++.+ ++..|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 5677776653 4533 44433333455666554421 00 123333 3442221 3578888 888888999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 9999999999777777766654 375 689998874
No 63
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.72 E-value=0.18 Score=50.73 Aligned_cols=48 Identities=33% Similarity=0.396 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.|++.+++..|.+++..|++++|||-|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4567888889999999999999999999888877654 375 78999987
No 64
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.65 E-value=0.16 Score=51.65 Aligned_cols=105 Identities=17% Similarity=0.287 Sum_probs=63.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCC-CCHHHHhccc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 404 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~-~~L~e~v~~v 404 (585)
.||.|+|||..|.++|..+... |+ ...++++|.+--..++...++.+ ..++....... .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~-~~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNH-GKVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHH-HTTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHH-HhhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 54 25799999852101000000111 01111100000 133567776
Q ss_pred CCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~g--------------~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+. ...+++++.|.++++.-++|-.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 899885544442 13467888888889888888899998
No 65
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.45 E-value=0.59 Score=51.27 Aligned_cols=179 Identities=18% Similarity=0.234 Sum_probs=117.9
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCceeeeeecCCCchH--HHHHHHHcC---CC------eeeccC---------CCch
Q 007904 247 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGT---TH------LVFNDD---------IQGT 304 (585)
Q Consensus 247 ~~g~~y~~~idefv~av~~--~fGp~~lIq~EDf~~~~a--f~lL~ryr~---~~------~~FnDD---------iQGT 304 (585)
.+..|-..|.-.||..+.+ -.||..-|-=+|++..-. --+.+.|+. .. |+-..- -.-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4567788899999999986 778999999999986532 226777752 11 111111 1224
Q ss_pred HHHHHHHHHH------HHHHhCC--CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCC
Q 007904 305 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 376 (585)
Q Consensus 305 aaV~lAgll~------A~r~~g~--~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r 376 (585)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4434444433 3456675 48999999999999999999998763 63 4566899999999764
Q ss_pred ccCCchhch-hhccccC------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 377 KDSLQHFKK-PWAHEHE------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 377 ~~~l~~~k~-~fa~~~~------~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
.++..+. .+..... ....+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433221 1111111 00011113456789999988885 79999988876 5789999998 54
No 66
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.40 E-value=0.94 Score=47.96 Aligned_cols=119 Identities=10% Similarity=0.092 Sum_probs=85.7
Q ss_pred CCeeeccCC---CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 293 THLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 293 ~~~~FnDDi---QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 84 gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~ 151 (381)
T 3oet_A 84 GIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDPP 151 (381)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 455555432 2344557999999999999999999999999999999999999753 75 57888762
Q ss_pred CcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC--------CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 370 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 370 GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~--------~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
. . . .. ......+|.|+++. .|+++=.-- .-++|+++.++.|. +..|+.=.|.
T Consensus 152 ~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~aR 211 (381)
T 3oet_A 152 R----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINACR 211 (381)
T ss_dssp H----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECSC
T ss_pred h----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECCC
Confidence 1 0 0 00 11123589999987 898874421 34689999999995 6778887776
Q ss_pred CC
Q 007904 442 PT 443 (585)
Q Consensus 442 Pt 443 (585)
-.
T Consensus 212 G~ 213 (381)
T 3oet_A 212 GP 213 (381)
T ss_dssp GG
T ss_pred Cc
Confidence 33
No 67
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.26 E-value=0.99 Score=49.28 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=76.0
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCC
Q 007904 317 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 395 (585)
Q Consensus 317 r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~ 395 (585)
|.++..+.+.+|+|+|+|..|.++|..+.. .|. +++.+|++- .+...|.. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 445668899999999999999999988864 262 688888741 11112221 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhc
Q 007904 396 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 455 (585)
Q Consensus 396 ~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~ 455 (585)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 99999998888899999999985 566887777765 3666555443
No 68
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.22 E-value=0.32 Score=47.17 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.9
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc--cCCCccCCc-hhchhhcccc--CC
Q 007904 319 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 393 (585)
Q Consensus 319 ~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi--~~~r~~~l~-~~k~~fa~~~--~~ 393 (585)
...++...||.|+|+|..|.++|..|.+. | .+++++|++-=- .+.....+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999998763 6 368888875210 000000000 0012232221 12
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 007904 394 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 443 (585)
Q Consensus 394 ~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~M-a~~~erPIIFaLSNPt 443 (585)
..++.|+++. +|++| ++.++. ...++++.+ +..-+..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578899987 88887 343332 344666666 4333677999999974
No 69
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.08 E-value=0.35 Score=50.80 Aligned_cols=159 Identities=15% Similarity=0.132 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHhcCCceeeeeecCCCchHHHHHHHHcCCC-eeeccC------C---CchHHHHHHHHHHHHHHh-CC
Q 007904 253 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD------I---QGTASVVLAGVVAALKLI-GG 321 (585)
Q Consensus 253 ~~~idefv~av~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~-~~FnDD------i---QGTaaV~lAgll~A~r~~-g~ 321 (585)
++++..|.+++.+..|+ .|-=+|++..-. .+...-+++ ++---- + .-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677788888887775 567788875432 333333333 211111 1 134444445556666664 76
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 322 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 322 -~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999998753 73 47788853 1 11322222221 111233343
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN-Pt 443 (585)
.. .+.|++|=++ ..+.++++.++.| .-.+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 5789999654 4668999888888 4467776666 54
No 70
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.06 E-value=0.059 Score=54.58 Aligned_cols=123 Identities=18% Similarity=0.293 Sum_probs=68.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccC-CCCCHHHHhcccC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLDAVKVIK 405 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~-~~~~L~e~v~~vk 405 (585)
||.|+|||+.|.++|..+.. .|+ ...++++|.+---..+...++.+. .+|..+.. ...+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~-~~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHA-APVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTS-CCTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhh-hhhcCCeEEEECC-HHHhCC--
Confidence 89999999999999987754 264 247999998521000000001110 01111100 0023 356765
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecC
Q 007904 406 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASG 466 (585)
Q Consensus 406 ptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsG 466 (585)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||... ....+.+.+.-.-+|.+|
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~---~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDL---LTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHH---HHHHHHHHSCSSCEEECT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHH---HHHHHHHhCChhcEEeCC
Confidence 8988865544321 127888999998888888889999842 233344443333455554
No 71
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.90 E-value=0.5 Score=48.92 Aligned_cols=97 Identities=23% Similarity=0.341 Sum_probs=60.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc----ccCCCCCH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNL 397 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~----~~~~~~~L 397 (585)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999888764 362 688888741 11 1111111111 00112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 398 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g-----~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 778875 899999876553 46899999885 34566666643
No 72
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.77 E-value=0.39 Score=48.79 Aligned_cols=99 Identities=16% Similarity=0.346 Sum_probs=62.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch------hhcccc-CCCCCHHH
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEH-EPVNNLLD 399 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~------~fa~~~-~~~~~L~e 399 (585)
||.|+|||+.|.++|..|... |. ...++++|++- ++ +..... ++.... -...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999888653 64 24799999851 11 111111 111000 00124 35
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 400 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
+++. +|++|=+...+.. .-+++++.|.++++.-+|+-.|||...
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 5654 8888855444331 127889999988888788889999853
No 73
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.77 E-value=0.14 Score=52.59 Aligned_cols=127 Identities=17% Similarity=0.249 Sum_probs=72.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 402 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~ 402 (585)
.||.|+|||+.|.++|.++.. .|+ -+++++|.+-=..++-...+.+...++.. ... ..++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGS-PAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCC-CCEEEECCCH-HHHC
Confidence 589999999999999988765 265 13999998521010000001111111110 111 1456 7787
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccc--cCcEEEecC
Q 007904 403 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 466 (585)
Q Consensus 403 ~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt--~Grai~AsG 466 (585)
+ .|++|=+.+.+ |. .-+++.+.+.++++.-+|+-.|||.+.. .+-+.+.+ .-.-+|++|
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~---t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAM---VYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH---HHHHHHHHCCCGGGEEESC
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHH---HHHHHHhcCCChhhEEEeC
Confidence 6 89888554322 21 2467888888899888877679998432 33333322 223455665
Q ss_pred CCCC
Q 007904 467 SPFD 470 (585)
Q Consensus 467 SPf~ 470 (585)
++.+
T Consensus 157 t~Ld 160 (328)
T 2hjr_A 157 GVLD 160 (328)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 4444
No 74
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.71 E-value=0.18 Score=49.82 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 56789999999999999999988764 87 789999987
No 75
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.62 E-value=0.37 Score=49.12 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=64.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 404 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~v 404 (585)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.. +..+ -....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111001211 2111 0111466 67776
Q ss_pred CCcEEEeccCCC--CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 405 KPTILIGSSGVG--RT-----------FTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 405 kptvLIG~S~~~--g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
.|++|=..+.+ |- .-+++++.|.++++.-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89988554432 10 13678889999999999988999983
No 76
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.60 E-value=0.29 Score=50.84 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
++.+++.... +....++.|+|+|..|-.++..+... .++ ++++++|+. ..+ .......|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555543 34668999999999999888776543 243 689999873 111 2222222211
Q ss_pred --c--cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCcCCCCHH
Q 007904 390 --E--HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAE 451 (585)
Q Consensus 390 --~--~~~~~~L~e~v~~vkptvLIG~S~~~---g~Ft~evi~~Ma~~~erPIIFaLSN--Pt~~~E~tpe 451 (585)
. .....++.|+++. .|++|=++..+ ..|..++++ +.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHH
Confidence 0 1124689999986 89999766543 134443332 3447777775 55 5777664
No 77
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.58 E-value=2.3 Score=43.60 Aligned_cols=121 Identities=14% Similarity=0.161 Sum_probs=77.0
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcchHHHHHHHH
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 343 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~~-------------------------g~~l~d~riv~~GAGsAg~GIA~l 343 (585)
..+++.|----. +|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|..
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 345555543222 3334678888876621 456889999999999999999998
Q ss_pred HHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc-CC---CCCC
Q 007904 344 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS-GV---GRTF 419 (585)
Q Consensus 344 l~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S-~~---~g~F 419 (585)
+... |. +++.+|+.. .. .....+ .-...+|.|+++. .|+++=+- .. .+++
T Consensus 169 l~~~-----G~-------~V~~~d~~~----~~-----~~~~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKGF-----NM-------RILYYSRTR----KE-----EVEREL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHHT-----TC-------EEEEECSSC----CH-----HHHHHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHhC-----CC-------EEEEECCCc----ch-----hhHhhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 8652 63 688888742 10 000011 0012478898886 89887432 21 2577
Q ss_pred CHHHHHHHHcCCCCcEEEecCC
Q 007904 420 TKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 420 t~evi~~Ma~~~erPIIFaLSN 441 (585)
++++++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888885 5667776663
No 78
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.55 E-value=0.22 Score=49.41 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-.|++.+++..|..++..+++|+|||.+|.++|..|.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888889999999999998888888777652 5 468888874
No 79
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.55 E-value=0.25 Score=53.33 Aligned_cols=105 Identities=15% Similarity=0.266 Sum_probs=66.6
Q ss_pred ccceEEEeCcchH--HHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc---cCCCCCHH
Q 007904 324 AEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---HEPVNNLL 398 (585)
Q Consensus 324 ~d~riv~~GAGsA--g~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~---~~~~~~L~ 398 (585)
+..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+......+.+. -....++.
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~~ 70 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTLK 70 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSHH
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCHH
Confidence 4579999999995 78999888752 222 2 3899999751 1100000000001110 01125799
Q ss_pred HHhcccCCcEEEeccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEecCCC
Q 007904 399 DAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~---------------g~---------------------Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
||++. +|.+|=.-.+| |. .-.++++.|.++|+.-+++-.|||
T Consensus 71 eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNP 148 (450)
T 3fef_A 71 KALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNP 148 (450)
T ss_dssp HHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred HHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99987 89888333222 22 135788889999999999999999
Q ss_pred C
Q 007904 443 T 443 (585)
Q Consensus 443 t 443 (585)
.
T Consensus 149 v 149 (450)
T 3fef_A 149 M 149 (450)
T ss_dssp H
T ss_pred h
Confidence 9
No 80
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.52 E-value=0.31 Score=47.71 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=54.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
.|++.+++..|.++++ +++|+|+|.+|..+|..|.+ .|. +++++|++ ..+ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887764 252 58888874 111 1111111211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007904 390 EHEPVNNLLDAVKVIKPTILIGSSGVG 416 (585)
Q Consensus 390 ~~~~~~~L~e~v~~vkptvLIG~S~~~ 416 (585)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3467776 5 499999766644
No 81
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.45 E-value=0.15 Score=52.18 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=66.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC--Ccc--cCCCccCCchhchhhccccCCCCCHHHH
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~--GLi--~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
.||+|.|| |..|..++..|+. .|+-...-...++++|.. .-- ..+...+|.+.-.+|..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998877764 254111112479999975 100 0000000111001222221122578899
Q ss_pred hcccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 401 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~---g-----------~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+++ .|++|=+.+.+ | ..++++++.+.+++ ...+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 89888555544 2 13578899999996 787787889998
No 82
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.31 E-value=0.2 Score=51.24 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=64.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCcc----CCchhchhhccccCC---CCCHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEP---VNNLL 398 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~----~l~~~k~~fa~~~~~---~~~L~ 398 (585)
.||.|+|||+.|.++|.++... |+ + +++++|.+ .++-+ .+.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~----~--~v~L~Di~----~~~l~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL----G--DVVLFDIV----KNMPHGKALDTSHT-NVMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS----SSHHHHHHHHHHTH-HHHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCC----HHHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 4899999999999999888763 65 1 39999975 22110 01111 011110111 1466
Q ss_pred HHhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 399 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~---g~----------------Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
+++++ .|++|=+.+.+ |. .-+++.+.|.++++.-+|+-.|||...
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 77876 89988554333 31 357788888899988887778999843
No 83
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.27 E-value=1.7 Score=44.37 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=85.3
Q ss_pred eeeecCCCchHHHHHHHHcCCCeeeccCCCc---hHHHHHHHHHHHHHHh---------------------CCCcccceE
Q 007904 273 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRF 328 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~~~~~FnDDiQG---TaaV~lAgll~A~r~~---------------------g~~l~d~ri 328 (585)
|+.-..+..|- .+-.--+..+++.|----. +|=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555555442 1111113467777764333 3344788888887732 356889999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcE
Q 007904 329 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 408 (585)
Q Consensus 329 v~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptv 408 (585)
.|+|.|..|..+|+.+.. .|+ +++.+|+.. .+ ....+ .+ ... ..++.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~-~~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAE-FVSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCE-ECCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Cce-eCCHHHHHhh--CCE
Confidence 999999999999998764 264 588888641 11 11110 11 001 1278888886 898
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 409 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 409 LIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
+|=.-. ..+++++++++.|. +..++.-.|+
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874432 23577888888884 4567765554
No 84
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.09 E-value=0.36 Score=47.79 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-.|++.+++..|.+++..+++|+|||.+|..+|..|.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998887777777542 5 468888874
No 85
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.92 E-value=0.65 Score=48.22 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++|++.||+|+|+|..|.-+|..|+.+ |+ .+|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457889999999999999999999876 87 789999986
No 86
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.77 E-value=0.18 Score=51.04 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=63.7
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC--CCcccCCCccCCchhchhhccccCC-CCCHHHHhc
Q 007904 327 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 402 (585)
Q Consensus 327 riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~r~~~l~~~k~~fa~~~~~-~~~L~e~v~ 402 (585)
||+|.| +|..|..++..|+. .|+ ...++++|. +-=-.++-..++.+... +..+..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 254 256999997 31000000001211111 1111000 023 56777
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 403 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 403 ~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+ .|++|=+.+.+ |- .++++++.|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 6 89998665544 32 4678889999999999999999998
No 87
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.72 E-value=0.21 Score=51.33 Aligned_cols=106 Identities=15% Similarity=0.274 Sum_probs=64.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
..||.|+|||+.|..++-+|+.. |+ ...++|+|.+-=-.++...+|.+ ..+|..+..-..+..+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~-~~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSN-ALPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHT-TGGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHH-HHHhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877542 54 26899999841000000000211 11222110000134677877
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 9999865554422 2245777888899999999999998
No 88
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.68 E-value=1.7 Score=45.20 Aligned_cols=189 Identities=16% Similarity=0.129 Sum_probs=109.3
Q ss_pred CCCeeeccCCC---chHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQ---GTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 292 ~~~~~FnDDiQ---GTaaV~lAgll~A~r~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
..|++.|---- .+|=-+++-+|+..|-. |..|.+.++.|+|.|..|-.+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 35556654322 34555788888887642 5678999999999999999999998642
Q ss_pred HHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 007904 348 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 423 (585)
Q Consensus 348 ~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~ev 423 (585)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- .-++|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 64 6888887531 010 01111112589999986 898884432 237899999
Q ss_pred HHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCC-C--CcceeCCeeeCcCCCcccccchhhhHHHHHh
Q 007904 424 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 500 (585)
Q Consensus 424 i~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSP-f--~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~ 500 (585)
++.|. +..|+.=.|+-..--|---.+|+ .+|+.-.| |-. | +| . ....-=+..|+.+-|=+|-....
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~EP-~---~~~pL~~~~nvilTPHia~~t~e- 318 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANEP-A---IDPRYRSLDNIFLTPHIGSATHE- 318 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTTT-S---CCTTGGGCTTEEECCSCTTCBHH-
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCCC-C---CCchHHhCCCEEEcCccCcCCHH-
Confidence 99995 67788877753322222222333 34653322 211 1 11 0 01111234578888876532111
Q ss_pred CCcccCHHHHHHHHHHHHccc
Q 007904 501 GAIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 501 ~a~~Itd~m~~aAA~aLA~~v 521 (585)
-.+.|...+++-|....
T Consensus 319 ----~~~~~~~~~~~ni~~~l 335 (345)
T 4g2n_A 319 ----TRDAMGWLLIQGIEALN 335 (345)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHH
Confidence 12345555555555554
No 89
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.57 E-value=0.19 Score=54.70 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=73.5
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc---ccCC---CCC
Q 007904 325 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEP---VNN 396 (585)
Q Consensus 325 d~riv~~GAGsAg--~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~---~~~~---~~~ 396 (585)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++.+........+.. .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999965 4446666531 122 236799999852 111101111111110 0111 247
Q ss_pred HHHHhcccCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 007904 397 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 436 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~---------------~g~Ft-------------------------~evi~~Ma~~~erPII 436 (585)
+.+++++ +|++|=+.+. .|.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 8988855432 13333 6899999999999999
Q ss_pred EecCCCCCcCCCCHHHHhccccCcEEEecC
Q 007904 437 LALSNPTSQSECTAEEAYTWSKGRAIFASG 466 (585)
Q Consensus 437 FaLSNPt~~~E~tpeda~~wt~Grai~AsG 466 (585)
+-.|||.. +..+-+.++..- -+|.+|
T Consensus 149 i~~TNPvd---i~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 149 LQAANPIF---EGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EECSSCHH---HHHHHHHHHSCS-EEEEEC
T ss_pred EEeCCcHH---HHHHHHHHCCCC-cEEecC
Confidence 99999982 233344445444 455554
No 90
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.52 E-value=0.25 Score=47.96 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=62.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
.++...||.|+|+|..|..+|..+... |. +.++++|++ . +.+......+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT----E---ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----H---HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC----H---HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988753 64 347888763 1 1111111111 00112467777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
++. +|++|=+.. +.. .+++++.+.... +..||.-+||-.+
T Consensus 66 ~~~--~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSC--CSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred hcC--CCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 764 898884433 333 388888887654 5678888888543
No 91
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.45 E-value=0.26 Score=50.45 Aligned_cols=105 Identities=12% Similarity=0.232 Sum_probs=63.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
.||.|+|||+.|..++-+|+.. |+ ...|+|+|.+-=-.++-..+|.+ ..+|..+..-..+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~-~~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLED-AQAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHG-GGGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHH-HHHhcCCeEEEECCHHHhCC--
Confidence 6999999999999988877553 54 26899999841000000001211 11232110000134677776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 406 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 406 ptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8999855544421 2345777888899999999999998
No 92
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.43 E-value=2.2 Score=45.61 Aligned_cols=114 Identities=21% Similarity=0.258 Sum_probs=81.0
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHHH---HHHHHc---CCC-e---eeccC----------CCchHHH
Q 007904 248 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 307 (585)
Q Consensus 248 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---lL~ryr---~~~-~---~FnDD----------iQGTaaV 307 (585)
+.+|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678899999999998899999999999873 222 345553 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE-EEcCCCccc
Q 007904 308 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIV 373 (585)
Q Consensus 308 ~lAgll~A~r~~g~~-l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~ 373 (585)
+.-++-.+++..|.. |++.++.|+|.|..|..+|+++... .|+ +++ +-|+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 666778888899999 9999999999999999999988651 264 344 448877544
No 93
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.21 E-value=0.51 Score=42.16 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=28.6
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+...+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 45567899999999999999988865 25 368889875
No 94
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.18 E-value=1.2 Score=44.08 Aligned_cols=83 Identities=20% Similarity=0.194 Sum_probs=56.1
Q ss_pred eeeecCCCchHHHHHHHHcC------CCeeeccCCCchHHHHHHHHHHHHHHh-CCCcccceEEEeC-cchHHHHHHHHH
Q 007904 273 IQFEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELI 344 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~------~~~~FnDDiQGTaaV~lAgll~A~r~~-g~~l~d~riv~~G-AGsAg~GIA~ll 344 (585)
+.++-+.-..+.+++++-+. +..+| .|..|.- ..-.|++.+++.. +.+++..+++|.| +|.+|.+++..|
T Consensus 62 ~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L 139 (287)
T 1lu9_A 62 IFVGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALL 139 (287)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHH
T ss_pred EEEccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHH
Confidence 33454445577777777652 23344 4445532 3456777888776 7889999999999 898888888877
Q ss_pred HHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 345 ALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 345 ~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+ .|. +++++|++
T Consensus 140 ~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 140 AG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HH-----TTC-------EEEEEESS
T ss_pred HH-----CcC-------EEEEEECC
Confidence 65 363 38888874
No 95
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.05 E-value=0.37 Score=49.17 Aligned_cols=100 Identities=23% Similarity=0.381 Sum_probs=62.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCcc----CCchhchhhccccC-CCCCHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE-PVNNLLDA 400 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~----~l~~~k~~fa~~~~-~~~~L~e~ 400 (585)
.||.|+|||..|..+|-+|.. .|+ ...++++|.+ .++.+ +|.+. .+|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~-~~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHG-LPFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTS-CCCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHh-HHhcCCeEEEECC-HHH
Confidence 589999999999998887654 254 2589999975 22211 01111 11211100 0123 566
Q ss_pred hcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007904 401 VKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~F--------------t~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+++ .|++|=+.+.+..- -+++++.|.++++.-+|+-.|||.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 776 99988555544211 268899999999999999999997
No 96
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=90.00 E-value=0.85 Score=46.14 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=64.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
++.+++.... +....+|.|+|+|..|..++..+... .|+ ++++++|+. .++ .......+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 44668999999999999998888653 254 678888873 111 1111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEecCC--CCCcCCCCH
Q 007904 390 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 450 (585)
Q Consensus 390 ~~~~~~~L~e~v~~vkptvLIG~S~~-~g~Ft~evi~~Ma~~~erPIIFaLSN--Pt~~~E~tp 450 (585)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988855432 1233332 1235568888753 43 355543
No 97
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.98 E-value=0.27 Score=51.41 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++.||+|+|||..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57899999999999999999999875 87 899999986
No 98
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.97 E-value=0.34 Score=49.36 Aligned_cols=107 Identities=13% Similarity=0.250 Sum_probs=65.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-cccCCCCCHHHHhc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 402 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-~~~~~~~~L~e~v~ 402 (585)
...||.|+|||..|..+|-.|... |+ -..++++|.+-=..++...++.+. .+|. .+..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999988876542 54 267999997510000000012221 2332 11000013467787
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 403 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+ .|++|=+.+.+.. .=+++++.|.++++.-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 9998855554422 1246777888899999999999998
No 99
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=89.95 E-value=0.99 Score=46.04 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=67.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
++.+++..... ....++.|+|+|..|-.++..+... .++ ++++++|+. .++ .......|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555554432 3567999999999998888777653 233 679988873 222 2222222221
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecC--CCCCcCCCCHH
Q 007904 390 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 451 (585)
Q Consensus 390 ---~~~~~~~L~e~v~~vkptvLIG~S~~~-g~Ft~evi~~Ma~~~erPIIFaLS--NPt~~~E~tpe 451 (585)
+.. ..++.|++ . .|++|-++..+ ..|+.+++ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46788988 5 89998766533 23443332 2556888883 455 6777764
No 100
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.92 E-value=0.65 Score=46.94 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=60.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCC----chhchhhcccc--CCCCCHHHH
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 400 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l----~~~k~~fa~~~--~~~~~L~e~ 400 (585)
||.|+|||..|.++|..+... |+ -.+++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887652 22 25799999862 111101 11000010000 01135655
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 401 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++. .|++|=+.+.+ |- +-+++++.|+++++.-+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 665 88887554332 21 1157788888888888988899998
No 101
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.81 E-value=1.9 Score=43.79 Aligned_cols=108 Identities=16% Similarity=0.193 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEE
Q 007904 304 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 365 (585)
Q Consensus 304 TaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~l 365 (585)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 344467888887763 34678999999999999999999988653 64 5888
Q ss_pred EcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 366 VDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 366 vD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|+.. .. . .+.+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.|
T Consensus 171 ~d~~~----~~-----~----~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~a 232 (307)
T 1wwk_A 171 YDPYP----NE-----E----RAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTS 232 (307)
T ss_dssp ECSSC----CH-----H----HHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred ECCCC----Ch-----h----hHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECC
Confidence 88741 10 0 1111 0112378898886 898885421 24688899999885 566888777
Q ss_pred C
Q 007904 441 N 441 (585)
Q Consensus 441 N 441 (585)
.
T Consensus 233 r 233 (307)
T 1wwk_A 233 R 233 (307)
T ss_dssp C
T ss_pred C
Confidence 6
No 102
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.59 E-value=0.35 Score=50.01 Aligned_cols=106 Identities=15% Similarity=0.255 Sum_probs=65.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
..||.|+|||..|..+|..|+.. |+ ...+.++|..-=..++-.-+|.+. .+|..+..-..+..+++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888764 65 258999998310000000012211 1232110001233566776
Q ss_pred CCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~---g-----~F------t~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+ | +| -+++++.|.++++.-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877444433 2 23 368889999999999999999998
No 103
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.40 E-value=0.22 Score=53.66 Aligned_cols=127 Identities=13% Similarity=0.190 Sum_probs=75.2
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc--c-cCC---CCCHH
Q 007904 326 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 398 (585)
Q Consensus 326 ~riv~~GAGsA-g~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~--~-~~~---~~~L~ 398 (585)
.||.|+|||+. |.+++..|+.. ..++. -..++|+|.+-- .++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 69999999997 55555555431 12442 267999998520 0111101111112211 1 111 25788
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 399 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~----------------------------------Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
+++++ .|++|=..+.++. .=+++++.|.++|+.-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999866655421 13588999999999999999999982
Q ss_pred cCCCCHHHHhccccCcEEEecC
Q 007904 445 QSECTAEEAYTWSKGRAIFASG 466 (585)
Q Consensus 445 ~~E~tpeda~~wt~Grai~AsG 466 (585)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2333344555332566654
No 104
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.39 E-value=0.27 Score=49.05 Aligned_cols=103 Identities=14% Similarity=0.277 Sum_probs=62.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc-hhchhhcccc--CCCCCHHHHh
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 401 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~-~~k~~fa~~~--~~~~~L~e~v 401 (585)
..||.|+|||+.|..+|..|... |. ..+++++|++---.++ ..+. .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 36899999999999999887653 53 1479999986300000 0010 0111121110 000133 455
Q ss_pred cccCCcEEEeccCCCCCCCH----------------HHHHHHHcCCCCcEEEecCCCCC
Q 007904 402 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~Ft~----------------evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
+. +|++|=+.+.+. ++ ++++.|+++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 54 898885554332 23 88999988888889999999984
No 105
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.19 E-value=0.5 Score=48.34 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=64.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhh-ccccCCCCCHHHHhcc
Q 007904 326 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~f-a~~~~~~~~L~e~v~~ 403 (585)
.||+|.| +|..|..++..|.. .|+ ...++++|.+.- .+...+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887653 354 256999996421 00000011100000 0000011257788887
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 404 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 404 vkptvLIG~S~~~g--------------~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899885554442 24678889999999899999999998
No 106
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=88.96 E-value=2.2 Score=43.60 Aligned_cols=101 Identities=14% Similarity=0.174 Sum_probs=66.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc----ccCCCCCHHH
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLD 399 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~----~~~~~~~L~e 399 (585)
...+++|+|+|..|-.+++.+... .++ ++|+++|+. +.+ .....+.. +.... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~---~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASP---EILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCH---HHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHH---HHHHHHHHhcCCeEEEe-CHHH
Confidence 467999999999998888777653 243 789999996 211 22222221 11123 8999
Q ss_pred HhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCcCCCCHHHH
Q 007904 400 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 453 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~-g~Ft~evi~~Ma~~~erPIIFaLSN--Pt~~~E~tpeda 453 (585)
+++. .|++|-++... .+|..++++ +..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l~------~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQALR------AGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGCC------TTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHcC------CCcEEEECCCCCCc-hhhcCHHHH
Confidence 9987 99999775433 255555443 6778888875 44 578888754
No 107
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.92 E-value=2.9 Score=42.78 Aligned_cols=137 Identities=10% Similarity=0.094 Sum_probs=88.2
Q ss_pred eeeecCCCchHHHHHHHHcCCCeeeccCCCch---HHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 007904 273 IQFEDFANHNAFELLAKYGTTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLF 330 (585)
Q Consensus 273 Iq~EDf~~~~af~lL~ryr~~~~~FnDDiQGT---aaV~lAgll~A~r~-------------------~g~~l~d~riv~ 330 (585)
|+.--.+..|- .+-.--+..+.+.|---..+ |=-+++.+|+..|. .|..|.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555554442 11111234677777533333 44478888887761 234688999999
Q ss_pred eCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEE
Q 007904 331 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 410 (585)
Q Consensus 331 ~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLI 410 (585)
+|.|..|..+|+.+... |+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988643 64 588888752 11 1 11 1111 2378899986 89988
Q ss_pred ecc----CCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 411 GSS----GVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 411 G~S----~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
=.- ...++|+++.++.|. +.-++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 642 234689999999885 5678888874
No 108
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.88 E-value=2 Score=41.25 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=61.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
..||.|+|+|..|..+|..|... |.. ...+++++|+. ..+ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988764 520 01368888874 111 0 00112467788875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 405 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 405 kptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 88777 33333 357888888876666678888888875
No 109
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.86 E-value=4.4 Score=43.31 Aligned_cols=192 Identities=13% Similarity=0.150 Sum_probs=116.6
Q ss_pred cCCCeeeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 007904 291 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 349 (585)
Q Consensus 291 r~~~~~FnDDiQ---GTaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 349 (585)
+..|++||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 357888886433 3455678888888763 24678999999999999999999988653
Q ss_pred hhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007904 350 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 425 (585)
Q Consensus 350 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~ 425 (585)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 75 6888987411 1100 01 124679999987 898884321 23689999999
Q ss_pred HHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCC-CC--cceeCCee-eCcCCCcccccchhhhHHHHHhC
Q 007904 426 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKV-FVPGQANNAYIFPGFGLGLVISG 501 (585)
Q Consensus 426 ~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSP-f~--pv~~~G~~-~~p~Q~NN~yiFPGiglG~l~~~ 501 (585)
.|. +..++.=.|.=..--|---.+|+ ..|+. .+.|-. |+ |..-+... ..--+..|+.+-|=+|-...-++
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~ 306 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQ 306 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHH
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHH
Confidence 995 67788888875432332233444 35653 322322 21 11100000 01124568999998764332222
Q ss_pred CcccCHHHHHHHHHHHHccc
Q 007904 502 AIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 502 a~~Itd~m~~aAA~aLA~~v 521 (585)
+.|...+++.|.+..
T Consensus 307 -----~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 307 -----ERIGTEVTRKLVEYS 321 (416)
T ss_dssp -----HHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHH
Confidence 446666677776665
No 110
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.85 E-value=2.7 Score=43.70 Aligned_cols=174 Identities=15% Similarity=0.064 Sum_probs=101.4
Q ss_pred CCCeeeccCCC---chHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 348 (585)
Q Consensus 292 ~~~~~FnDDiQ---GTaaV~lAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 348 (585)
..|.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 45666654322 2344578888888763 25679999999999999999999988643
Q ss_pred HhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007904 349 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 424 (585)
Q Consensus 349 ~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi 424 (585)
|+ +++.+|+... . ....+ .. ......+|.|+++. .|+++=.- ...++|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~----~---~~~~~-~~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM----A---PELEK-ET--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC----C---HHHHH-HH--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc----C---HHHHH-hC--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 75 4888887521 0 11100 00 01123579999987 89988432 23368999999
Q ss_pred HHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHH
Q 007904 425 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 496 (585)
Q Consensus 425 ~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~-~G~~~~p~Q~NN~yiFPGiglG 496 (585)
+.|. +..+|.=.|+-..--|---.+|+ .+|+.--|.--=|++--. ... .--+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EP~~~~~--pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAV--ESGHIGGYSGDVWDPQPAPKDH--PWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHH--HhCCccEEEeCCCCCCCCCCCC--hhhcCCCEEECCcCCCC
Confidence 9996 67788877764322232233343 346544332222211100 000 01134577777776543
No 111
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.83 E-value=1.8 Score=45.14 Aligned_cols=145 Identities=13% Similarity=0.169 Sum_probs=90.8
Q ss_pred eeeeecCCCchH-HHHHHHHcCCCeeeccCCC---chHHHHHHHHHHHHHH--------------------hCCCcccce
Q 007904 272 LIQFEDFANHNA-FELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHR 327 (585)
Q Consensus 272 lIq~EDf~~~~a-f~lL~ryr~~~~~FnDDiQ---GTaaV~lAgll~A~r~--------------------~g~~l~d~r 327 (585)
+|+.-..+..|- ...+.+.+..+.+.|---- .+|=-+++.+|+..|- .+..|.+.+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 366665555553 2223332335777764322 2344468888888762 356899999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCc
Q 007904 328 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPT 407 (585)
Q Consensus 328 iv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkpt 407 (585)
|.|+|.|..|..+|+.+... |+ ++++.+|+... ..... ..+ ......+|.|+++. .|
T Consensus 167 vgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~-------~~~~~-~~~--g~~~~~~l~ell~~--aD 223 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL-------PKDAE-EKV--GARRVENIEELVAQ--AD 223 (364)
T ss_dssp EEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC-------CHHHH-HHT--TEEECSSHHHHHHT--CS
T ss_pred EEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc-------chhHH-Hhc--CcEecCCHHHHHhc--CC
Confidence 99999999999999988642 64 34888886421 01100 111 00112478898885 89
Q ss_pred EEEeccCC----CCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 408 ILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 408 vLIG~S~~----~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
+++=.--. .++|+++.+..|. +.-+|.-.|+-
T Consensus 224 vV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 224 IVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 98854322 2688999888885 66788888763
No 112
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.80 E-value=2.2 Score=44.03 Aligned_cols=107 Identities=16% Similarity=0.266 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEE
Q 007904 304 TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC 364 (585)
Q Consensus 304 TaaV~lAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~ 364 (585)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777777653 2457889999999999999999998864 264 588
Q ss_pred EEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 365 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 365 lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.+|+..- . .. .+ . ...+|.|+++. .|+++=.-- ..++++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~~----~---~~----g~-~---~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSKK----P---NT----NY-T---YYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSCC----T---TC----CS-E---EESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCch----h---cc----Cc-e---ecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 8887521 1 11 01 0 12478898886 898874421 23688889999885 566777666
Q ss_pred CC
Q 007904 441 NP 442 (585)
Q Consensus 441 NP 442 (585)
.-
T Consensus 252 rG 253 (333)
T 3ba1_A 252 RG 253 (333)
T ss_dssp CG
T ss_pred CC
Confidence 54
No 113
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.79 E-value=0.82 Score=49.33 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=63.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 400 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 400 (585)
.++..+|.|+|+|..|..+|..|.+. |. +++++|+. . +........+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35678899999999999999998753 63 57788763 1 111111111100 01123578888
Q ss_pred hccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 401 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 401 v~~v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
++.. +||++| ++-+.+...+++++.+.... +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 44444456788888887654 356888899865
No 114
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.72 E-value=0.47 Score=48.42 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++|++.||+|+|+|..|.-+|..|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 579999999999999999999999886 87 799999987
No 115
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.70 E-value=0.35 Score=49.13 Aligned_cols=104 Identities=20% Similarity=0.257 Sum_probs=64.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHhccc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~--~~~~~L~e~v~~v 404 (585)
||.|+|||..|.++|..|... |+ ...+.++|.+-=..++-.-++.+....|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999852111100001211111121110 01134 778887
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+ |- .-+++++.|.++|+.-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887444433 32 1257778899999999999999998
No 116
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.69 E-value=0.49 Score=47.75 Aligned_cols=98 Identities=22% Similarity=0.321 Sum_probs=56.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch-hhcc----ccCCCCCHHH
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 399 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~-~fa~----~~~~~~~L~e 399 (585)
+.||.|+|+|+.|..+|..|.++ | .+++++|+..- +.+.+..... .|-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999998763 5 46888887410 0000110000 0000 0001135556
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCc
Q 007904 400 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 445 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~ 445 (585)
++. +|++|= +..+ -..+++++.++. +..+|..++|....
T Consensus 78 -~~~--aDvVil-~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILVI-AIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEEE-CSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEEE-ECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 553 676652 2222 467788777654 55678889987653
No 117
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=88.60 E-value=1.5 Score=45.20 Aligned_cols=188 Identities=15% Similarity=0.229 Sum_probs=109.2
Q ss_pred CCCeeeccCC---CchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 292 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 292 ~~~~~FnDDi---QGTaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777542 22444467777777652 26679999999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
|+ +++.+|+..- ..+.+.. .+ ...+|.|+++. .|+++=.- ...++|+++.+..
T Consensus 160 --G~-------~V~~~dr~~~----~~~~~~~---~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----PADHFHE---TV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----CCTTCSE---EE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----hhHhHhh---cc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 75 6888887531 1011111 11 12468888887 89888432 2246899999998
Q ss_pred HHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEe-----cCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhC
Q 007904 427 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 501 (585)
Q Consensus 427 Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~A-----sGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~ 501 (585)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ + ..-=+..|+.+-|=++-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~--~pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----D--HPLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----T--CGGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----C--ChhhcCCCEEEcCccccC-----
Confidence 85 667888777633222222223332 4543211 1112211 0 011134577888876521
Q ss_pred CcccCHHHHHHHHHHHHccc
Q 007904 502 AIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 502 a~~Itd~m~~aAA~aLA~~v 521 (585)
...-.+.|...+++-|....
T Consensus 281 t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 12233566666666666654
No 118
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.53 E-value=1 Score=46.91 Aligned_cols=95 Identities=18% Similarity=0.307 Sum_probs=61.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc----cCCCCCH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 397 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~----~~~~~~L 397 (585)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...+..+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999988865 263 588888741 11 11111111110 0012357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecC
Q 007904 398 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~-----g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.+.++. .|++|.+...+ .+++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 777875 89999876544 457899998885 445666666
No 119
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.26 E-value=0.33 Score=41.59 Aligned_cols=103 Identities=13% Similarity=0.173 Sum_probs=52.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH-
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 400 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~- 400 (585)
++..+|+|+|+|..|..+++.+.. .|. +++++|++. .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 455789999999999999888765 252 578888742 111111111001111 11111123222
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 589998665532011223444444445556766666665
No 120
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.13 E-value=1.6 Score=45.45 Aligned_cols=96 Identities=9% Similarity=0.195 Sum_probs=62.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHh
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 401 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v 401 (585)
++..||.|+|.|..|..+|..|.+. | .+++++|+. . +.+ ..++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~~~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---NAV----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---HHH----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---HHH----HHHHHCCCEEeCCHHHHH
Confidence 3567999999999999999988763 6 367888763 1 111 112221 12346788988
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 402 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 402 ~~v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+.. +||++|= +...+ -.+++++.+..+. +.-||.-+||-.
T Consensus 77 ~~a~~~DvVi~-~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVWL-MVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEEE-CSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEEE-eCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 874 5688773 33333 6788888876653 566888787643
No 121
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=88.04 E-value=5.2 Score=40.53 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=79.7
Q ss_pred cCCCeeeccCCCchHH---HHHHHHHHHHHHh-----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 291 GTTHLVFNDDIQGTAS---VVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 291 r~~~~~FnDDiQGTaa---V~lAgll~A~r~~-----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
+..+++.|----.+.+ -+++.+|+..|-. +..|.+.++.|+|.|..|-.+|+.+...
T Consensus 70 ~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~--- 146 (303)
T 1qp8_A 70 PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL--- 146 (303)
T ss_dssp CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT---
T ss_pred hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC---
Confidence 3467777643222334 4788888877632 2268899999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
|+ +++.+|+..- + . .. ....+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 147 --G~-------~V~~~dr~~~------~---~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 147 --GA-------QVRGFSRTPK------E---G---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp --TC-------EEEEECSSCC------C---S---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred --CC-------EEEEECCCcc------c---c---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhh
Confidence 64 5888887532 0 0 01 123478888886 89888542 2345788888888
Q ss_pred HHcCCCCcEEEecCC
Q 007904 427 MASFNEKPLILALSN 441 (585)
Q Consensus 427 Ma~~~erPIIFaLSN 441 (585)
|. +..++.=.|.
T Consensus 200 mk---~gailin~sr 211 (303)
T 1qp8_A 200 MA---EDAVFVNVGR 211 (303)
T ss_dssp SC---TTCEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 75 6678887776
No 122
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.03 E-value=1.8 Score=45.50 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=99.9
Q ss_pred chHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 007904 303 GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 361 (585)
Q Consensus 303 GTaaV~lAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~ 361 (585)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455567777777662 2346889999999999999999998753 264
Q ss_pred eEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEE
Q 007904 362 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLIL 437 (585)
Q Consensus 362 ~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~Ft~evi~~Ma~~~erPIIF 437 (585)
+++.+|+.. .. + . .....-...+|.|+++. .|+++=. ....++|+++.++.|. +.-|+.
T Consensus 201 ~V~~~d~~~----~~-~---~----~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL----PR-S---M----LEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS----CH-H---H----HHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC----CH-H---H----HhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 588888641 10 0 0 00111112479999986 8998843 2334689999999996 677888
Q ss_pred ecCCCCCcCCCCHHHHhccccCcEEEecCCC-C--CcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007904 438 ALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAAS 514 (585)
Q Consensus 438 aLSNPt~~~E~tpeda~~wt~Grai~AsGSP-f--~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA 514 (585)
=.|.-..--|---.+|+ ..|+.- | |-- | +|..-+ . .-=+..|+.+-|=+|-.... --..|...++
T Consensus 264 N~aRG~~vde~aL~~aL--~~g~i~-a-aLDV~~~EPl~~~-~--pL~~~~nvilTPHia~~t~e-----~~~~~~~~~~ 331 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAV--SSGHIV-A-ASDVYPEEPLPLD-H--PVRSLKGFIRSAHRAGALDS-----AFKKMGDMVL 331 (365)
T ss_dssp ECSCGGGSCHHHHHHHH--HTTSSE-E-EESCCSSSSCCTT-C--GGGTCTTEEECCSCSSCCHH-----HHHHHHHHHH
T ss_pred ECcCCchhCHHHHHHHH--HcCCce-E-EeeCCCCCCCCCC-C--hhhcCCCEEECCccccCHHH-----HHHHHHHHHH
Confidence 77754322222222333 356543 2 210 1 111000 0 01134677777776542221 1234555555
Q ss_pred HHHHcccC
Q 007904 515 EALAKQVT 522 (585)
Q Consensus 515 ~aLA~~v~ 522 (585)
+-|.....
T Consensus 332 ~ni~~~~~ 339 (365)
T 4hy3_A 332 EDMDLMDR 339 (365)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 55555543
No 123
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.95 E-value=2.6 Score=43.24 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=60.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .....+- . ...+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-----~~~~~~g--~-~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV-----NVEKELK--A-RYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH-----HHHHHHT--E-EECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-----hhhhhcC--c-eecCHHHH
Confidence 67999999999999999999998754 263 688888742 10 1001110 0 11378888
Q ss_pred hcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 401 VKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 401 v~~vkptvLIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
++. .|+++=+-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874322 13578888888885 45 7776663
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.92 E-value=3.9 Score=41.53 Aligned_cols=117 Identities=18% Similarity=0.166 Sum_probs=80.3
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
..+.+.|----. +|=-+++.+|+..|-. |..+.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 456666654323 3344688888876532 4568899999999999999999988642
Q ss_pred HHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 007904 348 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 423 (585)
Q Consensus 348 ~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~ev 423 (585)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 64 588888742 11 11 1 13578898886 89888652 2246788888
Q ss_pred HHHHHcCCCCcEEEecCCC
Q 007904 424 IEAMASFNEKPLILALSNP 442 (585)
Q Consensus 424 i~~Ma~~~erPIIFaLSNP 442 (585)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88774 67788888873
No 125
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.79 E-value=0.48 Score=53.18 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=34.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+|++.||+|+|||..|.-+|+.|+.+ |+ ++|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67889999999999999999999875 87 7999999873
No 126
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=87.71 E-value=0.27 Score=50.08 Aligned_cols=100 Identities=19% Similarity=0.312 Sum_probs=62.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCcc----CCchhchhhccccCC-CCCHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEP-VNNLLDA 400 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~----~l~~~k~~fa~~~~~-~~~L~e~ 400 (585)
.||.|+|||+.|..++-+|+.. |+ ...++|+|.+- ++.+ +|.+ ..+|.++..- ..+ .++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~----~k~~g~a~dl~~-~~~~~~~~~v~~~~-~~a 64 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDR----KLAQAHAEDILH-ATPFAHPVWVWAGS-YGD 64 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSH----HHHHHHHHHHHT-TGGGSCCCEEEECC-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHHHHH-hHhhcCCeEEEECC-HHH
Confidence 3899999999999988876542 44 25899999851 1110 1211 1122211000 123 567
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 401 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+++ .|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 776 89888444433 32 1256778888899999999999998
No 127
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=87.69 E-value=0.29 Score=53.06 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=75.3
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-c-c-cCC---CCCH
Q 007904 325 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HEP---VNNL 397 (585)
Q Consensus 325 d~riv~~GAGsA-g~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-~-~-~~~---~~~L 397 (585)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++.+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01441 35799999852 21111111111221 1 1 111 2478
Q ss_pred HHHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 398 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g~----------------------------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.+++++ +|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899987 9998865554321 1358899999999999999999998
Q ss_pred CcCCCCHHHHhccccCcEEEecC
Q 007904 444 SQSECTAEEAYTWSKGRAIFASG 466 (585)
Q Consensus 444 ~~~E~tpeda~~wt~Grai~AsG 466 (585)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333444545333466554
No 128
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.64 E-value=0.78 Score=47.27 Aligned_cols=106 Identities=17% Similarity=0.332 Sum_probs=64.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCC---CCHHH
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 399 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~---~~L~e 399 (585)
++..||.|+|||..|.++|.+|.. .|+ + .+.++|.+-=..++-..+|.+ ...|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~-~~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAE-SSPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHH-HHHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhc-hhhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988875 366 2 699999852111000001211 11122111111 344 7
Q ss_pred HhcccCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007904 400 AVKVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~---~g~-----F------t~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++++ .|++|=+.+. +|. | -+++++.|.++++.-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 8877 8988744443 332 1 256778888999999999999998
No 129
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.61 E-value=0.78 Score=46.46 Aligned_cols=103 Identities=21% Similarity=0.311 Sum_probs=61.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC---CCCHHHHhc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 402 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~ 402 (585)
.||.|+|||..|.++|..+.. .|+ . .++++|.+-=-.++...++.+.. .+...... ..++ ++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEAS-PIEGFDVRVTGTNNY-ADTA 69 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhH-hhcCCCeEEEECCCH-HHHC
Confidence 589999999999999998754 364 1 39999975100000000011110 01100111 1456 7777
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 403 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+ .|++|=+.+.+.. .-+++.+.+.++++.-+|+-.|||.
T Consensus 70 ~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 70 N--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp T--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 6 8998855544421 2247888888899888888889998
No 130
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.59 E-value=7.2 Score=41.25 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=82.9
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
..++++|----. +|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 467788765433 444578888888873 25679999999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
|+ +++.+|+..- ..+. -++ ...+|.|+++. .|+++=.- ...++|+++.+..
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~~---~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NAT---QVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TCE---ECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cce---ecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 75 5888887421 0010 011 23479999987 88887442 2236889999998
Q ss_pred HHcCCCCcEEEecCC
Q 007904 427 MASFNEKPLILALSN 441 (585)
Q Consensus 427 Ma~~~erPIIFaLSN 441 (585)
|. +.-++.=.|.
T Consensus 223 mk---~ga~lIN~aR 234 (404)
T 1sc6_A 223 MK---PGSLLINASR 234 (404)
T ss_dssp SC---TTEEEEECSC
T ss_pred cC---CCeEEEECCC
Confidence 85 6678887775
No 131
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.38 E-value=0.58 Score=47.57 Aligned_cols=98 Identities=17% Similarity=0.384 Sum_probs=62.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCcc----CCchhchhhccccCCC---CCHHH
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLLD 399 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~----~l~~~k~~fa~~~~~~---~~L~e 399 (585)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+ .++.+ ++.+. ..+....... .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~-~~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHA-AAELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHH-HHHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHh-hhhcCCCeEEEECCCH-H
Confidence 689999999999999777643 55 379999985 22211 01111 1111101111 355 6
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 400 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++++ .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 7776 9999866554431 1457888888999888777789998
No 132
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.32 E-value=0.4 Score=49.24 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=64.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHh
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 401 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v 401 (585)
+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=..++-..+|.+. ..+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 366 2 6999998521100000012111 1111111111 1224778
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 402 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 402 ~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++ .|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 89887554433 31 1257778888999998999999998
No 133
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.29 E-value=0.4 Score=49.18 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=64.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCC--CCHHHHhccc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~v 404 (585)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-+|.+ -..+....... .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~-~~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRE-SSPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHH-HHHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhc-cccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 55 25899999853111100001211 11121111111 245677877
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 89887444333 31 1256778889999999999999998
No 134
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.28 E-value=0.86 Score=45.84 Aligned_cols=102 Identities=13% Similarity=0.131 Sum_probs=59.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCC--ch-hchhhcc-ccCCCCCHHHHh
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL--QH-FKKPWAH-EHEPVNNLLDAV 401 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l--~~-~k~~fa~-~~~~~~~L~e~v 401 (585)
.||.|+|+|+-|..+|..|.++ | .+++++|+.-. ..=+...+ +. ....+.- +.....++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 5899999999999999888653 5 47888887531 00000000 00 0000000 000113555554
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 402 KVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
+ .+|++| ++... -.++++++.++.+. +..+|+.+.|--.
T Consensus 70 ~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 70 T--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp S--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred C--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 3 378877 55444 34678999997654 4567888999764
No 135
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.11 E-value=0.68 Score=47.76 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999988764 75 57888853
No 136
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=87.05 E-value=0.88 Score=48.49 Aligned_cols=124 Identities=12% Similarity=0.171 Sum_probs=74.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHh-hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc---CCCCCHHHHh
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 401 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~-~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~---~~~~~L~e~v 401 (585)
.||.|+|||+. .+..++..+.. ..++ ....|+|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l----~~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDV----RIDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTS----CCCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCC----CcCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 2344 136799999752 22110001111111110 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCcCC
Q 007904 402 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 447 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g---------------~F-------------------t~evi~~Ma~~~erPIIFaLSNPt~~~E 447 (585)
++ +|++|=..++++ ++ =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 87 999997776653 22 358999999999 99999999998 2
Q ss_pred CCHHHHhccccCcEEEecC
Q 007904 448 CTAEEAYTWSKGRAIFASG 466 (585)
Q Consensus 448 ~tpeda~~wt~Grai~AsG 466 (585)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2233344555332466554
No 137
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=86.96 E-value=7.8 Score=39.68 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=83.1
Q ss_pred cCCCeeeccCCCch---HHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 007904 291 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 349 (585)
Q Consensus 291 r~~~~~FnDDiQGT---aaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 349 (585)
+..+.+.|----.+ |=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35677777543333 33478888888772 23568899999999999999999988752
Q ss_pred hhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007904 350 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 425 (585)
Q Consensus 350 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~ 425 (585)
|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 588888742 1 1 0 1 11211 12378899886 898885422 23678899999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007904 426 AMASFNEKPLILALSNPT 443 (585)
Q Consensus 426 ~Ma~~~erPIIFaLSNPt 443 (585)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 885 667888777643
No 138
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=86.84 E-value=7.4 Score=40.37 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=82.3
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcchHHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 348 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~----------~----------g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 348 (585)
..|.+.|----. +|=-+++-+|+..|- . |..|.+.+|.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367888764333 344568888877761 2 3468899999999999999999988653
Q ss_pred HhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHH
Q 007904 349 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 424 (585)
Q Consensus 349 ~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi 424 (585)
|+ +++.+|+.. . .... ... ...+|.|+++. .|+++=.-- ..++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 65 688888852 1 0010 011 11379999987 999885432 2478999999
Q ss_pred HHHHcCCCCcEEEecCCCC
Q 007904 425 EAMASFNEKPLILALSNPT 443 (585)
Q Consensus 425 ~~Ma~~~erPIIFaLSNPt 443 (585)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9995 677888777533
No 139
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.82 E-value=0.69 Score=44.06 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=57.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEE-EcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
.||.|+|+|..|..+|..|.+. |. ++.+ +|++ .+.+......+-. ....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988763 64 3555 6653 1112222222210 111244566665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 405 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 405 kptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
+|++| ++..+ ...+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 33333 456778877765 45669999999984
No 140
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.79 E-value=0.59 Score=41.39 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 499999999999999988763 86 47888864
No 141
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.79 E-value=0.83 Score=45.76 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|+..+++..|.. .+.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4666666666654 56899999999999999888765 375 679998874
No 142
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.59 E-value=0.5 Score=46.45 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+|++.||+|+|+|..|.-+|..|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 46778999999999999999999875 76 7899999973
No 143
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.55 E-value=0.68 Score=46.06 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...|++.+++..+.++++.+++|+|||.+|.++|..|.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666655543 13 68888874
No 144
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.39 E-value=1.2 Score=44.28 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=57.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC--CCcccCCCccCCchhchhhc--------cccCCCC-
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 395 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~r~~~l~~~k~~fa--------~~~~~~~- 395 (585)
||.|+|+|..|..+|..|.+. | .+++++|+ +.- .+...++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988764 5 36888887 311 0111000000 0000112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 396 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 396 -~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++.|+++. +|++|=+ ..+ -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~~-v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLLG-VST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEEC-SCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEEc-CCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 57777765 7877733 323 25788888886633456888888865
No 145
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.29 E-value=1.7 Score=41.19 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=49.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
..+...||.|+|+|..|..+|..+.+. | .+++++|+. .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 356678999999999999999988653 5 368888763 11 2
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
++ ++|++|= +.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 3666552 222 2345677777654333678888999653
No 146
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.21 E-value=0.59 Score=52.30 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=34.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|++.||+|+|||..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468899999999999999999999874 87 799999986
No 147
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=86.21 E-value=4.5 Score=41.91 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeE
Q 007904 304 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 363 (585)
Q Consensus 304 TaaV~lAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i 363 (585)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777777753 2467899999999999999999998864 265 58
Q ss_pred EEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEec
Q 007904 364 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILAL 439 (585)
Q Consensus 364 ~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaL 439 (585)
+.+|+.. .. . . .+ ....+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~-~-~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS-G-V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT-T-S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc-c-c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888742 11 0 0 11 113579999987 899884321 23678899999886 66788878
Q ss_pred CCCCCcCCCCHHHHhc
Q 007904 440 SNPTSQSECTAEEAYT 455 (585)
Q Consensus 440 SNPt~~~E~tpeda~~ 455 (585)
|.-..--|-.-.+|++
T Consensus 258 aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK 273 (340)
T ss_dssp SCC-------------
T ss_pred CCCcccCHHHHHHHHH
Confidence 7754333433344443
No 148
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.20 E-value=0.55 Score=48.16 Aligned_cols=107 Identities=17% Similarity=0.276 Sum_probs=66.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC--cccCCCccCCchhchhhccccCCC--CCHH
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 398 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G--Li~~~r~~~l~~~k~~fa~~~~~~--~~L~ 398 (585)
.+..||.|+|||..|.++|..+... |+ ..+.++|.+- =..++...+|.+ ..++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 3457999999999999999988752 64 3799999851 011111001221 12332211111 1124
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 399 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+++++ .|++|=+.+.+ |- .-+++++.++++++.-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 66766 89887554433 31 2257888889999999999999998
No 149
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=86.00 E-value=4.2 Score=41.89 Aligned_cols=121 Identities=14% Similarity=0.082 Sum_probs=81.3
Q ss_pred CCeeeccCCC---chHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 293 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 293 ~~~~FnDDiQ---GTaaV~lAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
.|++.|---- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 4555554222 2444568888877752 35679999999999999999999998753
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
|+ +++.+|+..- .. .........+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~----------~~---~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR----------ED---LKEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC----------HH---HHHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc----------hh---hHhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 10 00101112359999987 89888442 2346899999999
Q ss_pred HHcCCCCcEEEecCCCC
Q 007904 427 MASFNEKPLILALSNPT 443 (585)
Q Consensus 427 Ma~~~erPIIFaLSNPt 443 (585)
|. +..|+.=.|.-.
T Consensus 220 mk---~gailIN~aRg~ 233 (334)
T 2pi1_A 220 MK---DGVYLINTARGK 233 (334)
T ss_dssp SC---TTEEEEECSCGG
T ss_pred CC---CCcEEEECCCCc
Confidence 95 667888777644
No 150
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=85.75 E-value=7.2 Score=39.96 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=82.2
Q ss_pred CCCeeeccCCCch---HHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 349 (585)
Q Consensus 292 ~~~~~FnDDiQGT---aaV~lAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 349 (585)
..+.+.|---..+ |=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777543333 33468888887651 24578999999999999999999988643
Q ss_pred hhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007904 350 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 425 (585)
Q Consensus 350 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~evi~ 425 (585)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1111 1378899886 898885421 23689999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007904 426 AMASFNEKPLILALSNPT 443 (585)
Q Consensus 426 ~Ma~~~erPIIFaLSNPt 443 (585)
.|. +.-++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 995 567887777643
No 151
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=85.55 E-value=1.2 Score=45.01 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=64.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC--CCcccCCCccCCchhchhhccccCCC----CCHHH
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEPV----NNLLD 399 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~r~~~l~~~k~~fa~~~~~~----~~L~e 399 (585)
||+|.|| |..|..++..|+. .|+ ...++++|. +-=-..+-..++.+. .++....... .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDA-LAGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHH-HTTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHh-HHhcCCCeEEEeCCcchHH
Confidence 8999999 9999998887753 254 256999996 210000000002111 1222100011 13678
Q ss_pred HhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 400 AVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++++ .|++|=+.+.+ |- .+++++++|.+++ +.+|+-.|||.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 8887 89888666544 21 3668899999999 99999999998
No 152
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.37 E-value=1.9 Score=46.76 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=59.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~v~~ 403 (585)
.+|.|+|+|..|.++|..|.+. |. +++++|+.- . .+..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----S---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----H---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4799999999999999998763 64 578888641 1 1111111 000 001123578887765
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCCC-CcEEEecCCCC
Q 007904 404 I-KPTILIGSSGVGRTFTKEVIEAMASFNE-KPLILALSNPT 443 (585)
Q Consensus 404 v-kptvLIG~S~~~g~Ft~evi~~Ma~~~e-rPIIFaLSNPt 443 (585)
. +||++| ++-+.+...+++++.+..+.+ ..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 444344456777877765543 46777788744
No 153
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=85.26 E-value=1.8 Score=44.56 Aligned_cols=186 Identities=15% Similarity=0.090 Sum_probs=107.2
Q ss_pred CCeeeccCCC---chHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcC
Q 007904 293 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 353 (585)
Q Consensus 293 ~~~~FnDDiQ---GTaaV~lAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G 353 (585)
.|++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555553211 2344467777777663 35679999999999999999999998653 6
Q ss_pred CChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHc
Q 007904 354 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMAS 429 (585)
Q Consensus 354 ls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~Ma~ 429 (585)
+ +++.+|+.. .. ... +.. .....+|.|+++. .|+++=.- ..-++|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~----~~---~~~----~~~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG----RE---RAG----FDQ-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC----CC---CTT----CSE-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh----HH---hhh----hhc-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 5 688888864 11 111 110 1123578898886 88887432 224678888888775
Q ss_pred CCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEe-----cCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcc
Q 007904 430 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIR 504 (585)
Q Consensus 430 ~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~A-----sGSPf~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~ 504 (585)
+..|+.=.|.-..--|---.+|+ .+|+.-.| ..-|.++- ..-=+..|+.+-|=++- .+
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EPl~~~------~pL~~~~nvilTPHia~------~t- 284 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTAL--RTGKLGMAVLDVFEQEPLPAD------SPLWGQPNLIITPHNSA------YS- 284 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHH--HTTSSSEEEESCCSSSSCCTT------CTTTTCTTEEECCSCSS------CC-
T ss_pred --CCcEEEECCCchhhCHHHHHHHH--HcCCceEEEeccCCCCCCCCC------ChhhcCCCEEEeCCCcc------cc-
Confidence 66788877753322222222333 23442111 11122110 00113457888887653 22
Q ss_pred cCHHHHHHHHHHHHcccC
Q 007904 505 VHDDMLLAASEALAKQVT 522 (585)
Q Consensus 505 Itd~m~~aAA~aLA~~v~ 522 (585)
....|...+++-|.....
T Consensus 285 ~~~~~~~~~~~nl~~~~~ 302 (324)
T 3hg7_A 285 FPDDVAQIFVRNYIRFID 302 (324)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 225677777777766654
No 154
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=85.26 E-value=0.52 Score=48.62 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=65.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC-CCCHHHHhcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~-~~~L~e~v~~ 403 (585)
-.||.|+|||..|..+|..|... |+ ...+.++|.+-=..++-.-+|.+. .+|....-. ..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 36899999999999999988763 65 258999997410000000012221 233211000 1122466766
Q ss_pred cCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007904 404 IKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 404 vkptvLIG~S~~---~g~-----F------t~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+. +|- | -+++++.+.++++.-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 8887744433 331 1 267788889999999999999998
No 155
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.70 E-value=6.6 Score=40.45 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=63.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007904 320 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 399 (585)
Q Consensus 320 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e 399 (585)
|..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+..- . ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5678999999999999999999988622 264 6888887421 1 11111 01 0011247888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007904 400 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 442 (585)
Q Consensus 400 ~v~~vkptvLIG~S~----~~g~Ft~evi~~Ma~~~erPIIFaLSNP 442 (585)
+++. .|+++=.-. ..++++++.++.|. +..||.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 898884421 23688888998884 56677766653
No 156
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=84.59 E-value=4.8 Score=40.98 Aligned_cols=122 Identities=15% Similarity=0.171 Sum_probs=77.7
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
..+.+.|----. +|=-+++.+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 168 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF 168 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 355666643322 344467888887663 23568899999999999999999988642
Q ss_pred HHhhcCCChhhhcCeEEEEcC-CCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHH
Q 007904 348 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 422 (585)
Q Consensus 348 ~~~~~Gls~eeA~~~i~lvD~-~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Ft~e 422 (585)
|+ +++.+|+ .. . . ...+ .+ ......+|.|+++. .|+++=.-- ..++++++
T Consensus 169 -----G~-------~V~~~d~~~~----~--~--~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 169 -----DM-------DIDYFDTHRA----S--S--SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp -----TC-------EEEEECSSCC----C--H--HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred -----CC-------EEEEECCCCc----C--h--hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 63 6888887 41 1 0 0000 01 00112378898886 888874421 23578888
Q ss_pred HHHHHHcCCCCcEEEecCC
Q 007904 423 VIEAMASFNEKPLILALSN 441 (585)
Q Consensus 423 vi~~Ma~~~erPIIFaLSN 441 (585)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888775 5667777776
No 157
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=84.44 E-value=6.4 Score=39.86 Aligned_cols=176 Identities=13% Similarity=0.084 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEc
Q 007904 304 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 367 (585)
Q Consensus 304 TaaV~lAgll~A~r~~----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD 367 (585)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445677777766531 1458899999999999999999998754 65 688888
Q ss_pred CCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 368 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 368 ~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+.. .. ... +. ...+|.|+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23579999987 88887432 224678899988885 677888777533
Q ss_pred CcCCCCHHHHhccccCcEEEecCCCC--CcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007904 444 SQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 444 ~~~E~tpeda~~wt~Grai~AsGSPf--~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~aLA~~v 521 (585)
.--|---.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 212222223332 343322211111 111 112245688888876511 223445677777777777765
Q ss_pred Cc
Q 007904 522 TE 523 (585)
Q Consensus 522 ~~ 523 (585)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 43
No 158
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=84.41 E-value=4.6 Score=41.62 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=79.4
Q ss_pred CCeeeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 007904 293 THLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 351 (585)
Q Consensus 293 ~~~~FnDDiQ---GTaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 351 (585)
.+++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 5666665322 2344467888887764 2567999999999999999999998864
Q ss_pred cCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 352 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 352 ~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=+- ...++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 263 588888641 1 10 1111 0012479899886 89988542 1235788888888
Q ss_pred HHcCCCCcEEEecCC
Q 007904 427 MASFNEKPLILALSN 441 (585)
Q Consensus 427 Ma~~~erPIIFaLSN 441 (585)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 85 6678887776
No 159
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.20 E-value=1.9 Score=44.71 Aligned_cols=100 Identities=23% Similarity=0.193 Sum_probs=58.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh--chhhccc---cC---CCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAHE---HE---PVNN 396 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~--k~~fa~~---~~---~~~~ 396 (585)
..||.|+|+|+-|..+|..|.+. | .+++++|++--.. +.+... ...|... .+ ...+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~----~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHV----DEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHH----HHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHH----HHHHHcCCCcccCCCCccCCCeEEECC
Confidence 36899999999999999988753 5 3577888741100 001000 0001000 00 1246
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 397 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
+.|+++. +|++| ++.+. -+.+++++.++.+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 7788875 77766 33322 36777888777654 3557777787553
No 160
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.17 E-value=4.4 Score=42.90 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeE
Q 007904 304 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 363 (585)
Q Consensus 304 TaaV~lAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i 363 (585)
+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ ++
T Consensus 150 VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V 217 (393)
T 2nac_A 150 VAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HL 217 (393)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EE
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EE
Confidence 344467777777652 25679999999999999999999988642 64 58
Q ss_pred EEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEec
Q 007904 364 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILAL 439 (585)
Q Consensus 364 ~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~Ma~~~erPIIFaL 439 (585)
+.+|+... . . .....+ ......+|.|+++. .|+++=.- ...++|+++.++.|. +.-+|.=.
T Consensus 218 ~~~d~~~~----~---~-~~~~~~--G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~ 282 (393)
T 2nac_A 218 HYTDRHRL----P---E-SVEKEL--NLTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNT 282 (393)
T ss_dssp EEECSSCC----C---H-HHHHHH--TCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEEC
T ss_pred EEEcCCcc----c---h-hhHhhc--CceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEEC
Confidence 88886421 0 1 000011 00112478898886 89888542 224688999988885 56788877
Q ss_pred CC
Q 007904 440 SN 441 (585)
Q Consensus 440 SN 441 (585)
|.
T Consensus 283 aR 284 (393)
T 2nac_A 283 AR 284 (393)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 161
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.88 E-value=1.6 Score=42.09 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=56.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhc---hhhccccCCCCCHHHHhcc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k---~~fa~~~~~~~~L~e~v~~ 403 (585)
||.|+|+|..|..+|..|.+. | .+++++|+.- .+.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988753 5 3688888752 1111111100 000 00001122 466664
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 404 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 404 vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+|++|=+ ..+. -.+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi~~-v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLVT-LKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEEC-SCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEEE-ecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 8888743 3332 3689999887654 356777788865
No 162
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.81 E-value=2.9 Score=37.66 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=54.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.+|+|.|| |-.|-.+++.|++ .| .++++++++.- ....+......+.. +.....++.++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAG 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcC
Confidence 68999998 7777777777764 25 36888887521 10111011111111 11222357777875
Q ss_pred cCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~---------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+.+.... .+..+++.|.+..-+.|||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred --CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 8999988765431 1456666666544445555433
No 163
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.79 E-value=1 Score=44.79 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998763 63 68899874
No 164
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.78 E-value=1.8 Score=42.41 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=58.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
-.||.|+|+|..|..+|..|... |. ..+++++|++. +.+...+..-.. .....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 36899999999999999988753 42 14688888741 111111110000 0012356677765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~g~Ft~evi~~Ma~~--~erPIIFaLSNPt 443 (585)
+|++| ++.++... +++++.+..+ .+..||.-+||-.
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 88877 44444333 8888888765 4566777677643
No 165
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.23 E-value=2.1 Score=43.75 Aligned_cols=191 Identities=13% Similarity=0.081 Sum_probs=108.5
Q ss_pred CCCeeeccCC----CchHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 007904 292 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 351 (585)
Q Consensus 292 ~~~~~FnDDi----QGTaaV~lAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 351 (585)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4566665321 33455678888888764 25678999999999999999999988643
Q ss_pred cCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 007904 352 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 427 (585)
Q Consensus 352 ~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~M 427 (585)
|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ..-++|+++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 65 5788887421 111110 11 011468888886 89887431 22468899998888
Q ss_pred HcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccC
Q 007904 428 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 506 (585)
Q Consensus 428 a~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~It 506 (585)
. +..|+.=.|+-..--|---.+|+ ..|+.-.|.=-=|++--. .+. .-=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL--~~g~i~gA~lDV~~~EPl~~~~--pL~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAAL--DSGKLKGAMLDVFSQEPLPQES--PLWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTC--GGGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHH--HhCCccEEEcCCCCCCCCCCCC--hhhcCCCEEECCCCCc------ccH-H
Confidence 5 66788877764422222223333 345543322111110000 000 0113457778787662 221 2
Q ss_pred HHHHHHHHHHHHcccC
Q 007904 507 DDMLLAASEALAKQVT 522 (585)
Q Consensus 507 d~m~~aAA~aLA~~v~ 522 (585)
+.|...+++-|.....
T Consensus 286 ~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 286 AEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 4666666666666543
No 166
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=83.20 E-value=0.85 Score=46.09 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc---ccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL---i~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
.||+|.|| |..|.-++..|+. .|.-...-...++++|...- ...... ++.+...+|..+-....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999998887754 25310000137999997420 000000 11111112322211224688888
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 402 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
++ +|++|=+.+.+.. .|.++++++.+++ ...+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977665531 3566788888886 666888899996
No 167
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.88 E-value=3.1 Score=42.10 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=54.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHHH-H
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLD-A 400 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~e-~ 400 (585)
.||.|+|+|..|..+|..|... |. ..+++++|++- +.+. .+... ....++.| +
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~~~~~~ 91 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESIS-----KAVDLGIIDEGTTSIAKVE 91 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHH-----HHHHTTSCSEEESCTTGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHH-----HHHHCCCcchhcCCHHHHh
Confidence 7999999999999999988763 65 24789888741 1111 11110 01245666 6
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 440 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~-~erPIIFaLS 440 (585)
++. +|++| ++.++. -.+++++.+..+ .+.-||.-.+
T Consensus 92 ~~~--aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 92 DFS--PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp GGC--CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred hcc--CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 665 77777 444443 356777777653 3455665444
No 168
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=82.70 E-value=1.9 Score=46.33 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=59.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-----cccCCCCCHHHHh
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 401 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-----~~~~~~~~L~e~v 401 (585)
||.|+|+|..|..+|..|.+. |. +++++|+.. .+ +......+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988753 63 588888741 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 402 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 402 ~~v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+.. ++|++| ++.+.+...+++++.+..+. +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 44434334677887776543 456788888865
No 169
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=82.59 E-value=1 Score=46.69 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++|++.+|+|+|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 367789999999999999999999876 87 899999976
No 170
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=82.53 E-value=5.2 Score=41.60 Aligned_cols=188 Identities=16% Similarity=0.128 Sum_probs=110.8
Q ss_pred CCeeeccC-C-CchHHHHHHHHHHHHHH----------------------------hCCCcccceEEEeCcchHHHHHHH
Q 007904 293 THLVFNDD-I-QGTASVVLAGVVAALKL----------------------------IGGTLAEHRFLFLGAGEAGTGIAE 342 (585)
Q Consensus 293 ~~~~FnDD-i-QGTaaV~lAgll~A~r~----------------------------~g~~l~d~riv~~GAGsAg~GIA~ 342 (585)
.|++.|.- . ..+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 56666622 2 23444567777777663 256789999999999999999999
Q ss_pred HHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCC
Q 007904 343 LIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRT 418 (585)
Q Consensus 343 ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ 418 (585)
.+... |+ +++.+|+.. .. + .... .......+|.|+++. .|+++=.- ...++
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~l 232 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDALFEQ--SDVLSVHLRLNDETRSI 232 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHHHHHH--CSEEEECCCCSTTTTTC
T ss_pred HHHhC-----CC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHHHHhh--CCEEEEeccCcHHHHHh
Confidence 88653 65 688888741 00 0 0000 001123589999987 89888432 23468
Q ss_pred CCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEE------EecCCCCCcceeCCeeeCcCCCcccccchh
Q 007904 419 FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPFDPFEYNGKVFVPGQANNAYIFPG 492 (585)
Q Consensus 419 Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai------~AsGSPf~pv~~~G~~~~p~Q~NN~yiFPG 492 (585)
|+++.++.|. +..++.=.|+-..--|---.+|++ +|+.- |.. -|.++ . ..-=+..|+.+-|=
T Consensus 233 i~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl~~----~--~pL~~~~nvilTPH 300 (352)
T 3gg9_A 233 ITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPILQ----G--HTLLRMENCICTPH 300 (352)
T ss_dssp BCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCCCS----C--CGGGGCTTEEECCS
T ss_pred hCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCCCC----C--ChhhcCCCEEECCC
Confidence 9999999885 677888888744334444445554 34431 221 12211 0 01123468888887
Q ss_pred hhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007904 493 FGLGLVISGAIRVHDDMLLAASEALAKQVT 522 (585)
Q Consensus 493 iglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 522 (585)
+|-.. ..--+.|...+++-|.....
T Consensus 301 ia~~t-----~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 301 IGYVE-----RESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CTTCB-----HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 74211 11124566666666666553
No 171
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.38 E-value=0.66 Score=45.30 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=56.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc------ccCCCCCHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPVNNLLD 399 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~------~~~~~~~L~e 399 (585)
.||.|+|+|..|..+|..|.+. | .+++++|++.= +.+.+......... ......+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999888653 5 36888887421 00001100000000 0000112223
Q ss_pred Hhccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 400 AVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 400 ~v~~v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
+.+.+ ++|++|= +..+. ..+++++.++.+. +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEEE-CSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEEE-Eeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 33211 4787773 33232 4688888887654 4678888998663
No 172
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.00 E-value=2.7 Score=42.27 Aligned_cols=111 Identities=13% Similarity=0.168 Sum_probs=63.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCC-CccCCchhc--hhhccc---cCC---CC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE---HEP---VN 395 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~~l~~~k--~~fa~~---~~~---~~ 395 (585)
..||.|+|+|..|..+|..|.+. |........+++++|+..-.... +.+.+.... ..|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 36899999999999999999875 31000001468888875321100 000011000 001000 001 14
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 396 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 396 ~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
++.|+++. +|++| ++..+ -..+++++.++.+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 67888875 88777 33333 46789999887654 4668889999554
No 173
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=81.86 E-value=1.8 Score=44.01 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=64.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC--CCCHHHHhccc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~--~~~L~e~v~~v 404 (585)
||.|+|||..|..+|-+|... |+ ...+.|+|..-=...+-.-+|.+ -..|...... ..+-.+++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h-~~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAH-AAAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHH-HHGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhc-ccccCCCCCeEecCCCHHHhCC-
Confidence 799999999999988887652 55 25799999752111111001322 1122211111 1122356766
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 405 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+ |- .-+++++.+++++...||.-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 89998555544 31 1146788889999999999999998
No 174
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.65 E-value=2.5 Score=41.53 Aligned_cols=91 Identities=13% Similarity=0.195 Sum_probs=57.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
.||.|+|+ |..|..+|..|... |. +++++|+. . +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g~-------~V~~~~r~----~---~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----AH-------HLAAIEIA----P---EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----SS-------EEEEECCS----H---HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CC-------EEEEEECC----H---HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 99999999988652 53 68888863 1 11111111 1 1111356677765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 405 KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 405 kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+|++|= +..+.. .+++++.+..+. +..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 898884 333333 688888887643 456777788854
No 175
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=81.62 E-value=1.4 Score=46.74 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=20.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~ 347 (585)
.||.|+|||+=|+.+|..|.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 3899999999999999999875
No 176
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=81.60 E-value=1.9 Score=44.77 Aligned_cols=107 Identities=17% Similarity=0.351 Sum_probs=64.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc-CCCCCHHHH
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 400 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~-~~~~~L~e~ 400 (585)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865544 375 246999997410000000012221 221100 011478888
Q ss_pred hcccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEecCCCC
Q 007904 401 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPT 443 (585)
Q Consensus 401 v~~vkptvLIG~S~~~---g-----------~Ft~evi~~Ma~~~erPI-IFaLSNPt 443 (585)
+++ .|++|=+.+.+ | ..-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 89888444333 3 123567778888998885 88899997
No 177
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=81.59 E-value=3 Score=44.73 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=61.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
..||.|+|+|..|..+|..|.+. |. +++++|+. . +.+......+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988753 64 57788763 1 111111111100 01123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 404 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 404 v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
. +||++| ++.+.+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 588877 44444445677888776544 356788888864
No 178
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.58 E-value=3.3 Score=44.11 Aligned_cols=71 Identities=25% Similarity=0.374 Sum_probs=47.7
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
--|++|+|+ |.+|.|-++.+... |.. ..++..+|.+= ..++. +| +.+..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 468999999 99999999888653 641 11566666530 01100 01 23443
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 007904 404 IKPTILIGSSGV----GRTFTKEVIEAM 427 (585)
Q Consensus 404 vkptvLIG~S~~----~g~Ft~evi~~M 427 (585)
.|++||+--. |-++|+|+++.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998754 568999999988
No 179
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.47 E-value=1.2 Score=42.23 Aligned_cols=94 Identities=15% Similarity=0.160 Sum_probs=55.9
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 402 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~ 402 (585)
-...||.|+|+|..|..+|..+... |. +++++|++- ++ .. .++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 3456899999999999999888652 53 588888741 11 11 11111001126778887
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 403 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
. +|++|=+.. +. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 5 898884433 32 3455554 433335668899999873
No 180
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=81.38 E-value=0.72 Score=42.92 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=59.1
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc---c--ccCCCCCHHHH
Q 007904 327 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 400 (585)
Q Consensus 327 riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa---~--~~~~~~~L~e~ 400 (585)
||+|+| +|..|..+|..|.+ .| .+++++|++ .++ ....+..+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988864 25 368888874 111 111111110 0 011 2468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 444 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~ 444 (585)
++. .|++|=+.. +. ..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~~-~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-WE-HAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-HH-HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-hh-hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 876 899885443 32 35677777754334679999999764
No 181
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.13 E-value=1.3 Score=44.70 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc
Q 007904 310 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 389 (585)
Q Consensus 310 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~ 389 (585)
.|++.+++..| +.+++|+|||.+|-+++..|.+. | .+|+++++. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 78999999999998888887653 4 578988884 22211121 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEecC
Q 007904 390 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS 440 (585)
Q Consensus 390 ~~~~~~~L~e~v~~vkptvLIG~S~~~----g~Ft~evi~-~Ma~~~erPIIFaLS 440 (585)
.......| . ++|++|-++..+ -.+.++.+. .+. +..+|+=++
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 10111222 1 699999766544 146777554 343 455776554
No 182
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=80.96 E-value=3.2 Score=39.88 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=59.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
.||.|+|+|..|..+|..|.+. |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999988763 531 12468888873 1 1122221111 11123578899887
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 406 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 406 ptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
+|++|= +..+ -..+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVil-av~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILIL-SIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEEE-CSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEEE-EeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 888873 3333 45678888877554 4557777777664
No 183
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.63 E-value=1.5 Score=43.28 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998763 63 68888874
No 184
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=80.59 E-value=0.86 Score=47.16 Aligned_cols=108 Identities=18% Similarity=0.259 Sum_probs=66.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 399 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~--~~~~~L~e 399 (585)
+....||.|+|||..|.++|-.|+.. |+ ...+.++|.+-=..++-.-+|.+ -..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~-~~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQH-GSLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHH-TGGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhh-hhhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 25799999741000000001221 11232110 0123453
Q ss_pred HhcccCCcEEEeccCC---CC-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 007904 400 AVKVIKPTILIGSSGV---GR-----TF------TKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~---~g-----~F------t~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++++ .|++|=+.+. +| +| -+++.+.|+++|+.-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 5666 8888734333 33 12 257888899999999999999998
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.58 E-value=1.4 Score=47.40 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhcCCceeeeeecCCCchHHHHHHHHc-CCCeee--ccCCCchHHHHHHHHHHHHHHhC--------CCcc
Q 007904 256 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIG--------GTLA 324 (585)
Q Consensus 256 idefv~av~~~fGp~~lIq~EDf~~~~af~lL~ryr-~~~~~F--nDDiQGTaaV~lAgll~A~r~~g--------~~l~ 324 (585)
+..+++.+...+ ++ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+.... ..-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 555666666667 44 5555444445567888986 467744 66566667666666666543321 0113
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.||+..|..+.+ .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4679999999999999988765 364 56777753
No 186
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.58 E-value=1.6 Score=47.21 Aligned_cols=36 Identities=6% Similarity=-0.145 Sum_probs=26.3
Q ss_pred CcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007904 480 VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 515 (585)
Q Consensus 480 ~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~ 515 (585)
.||+.-|-+++|.+.=++.+....-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 688888888889888777777333377777766654
No 187
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=80.31 E-value=2 Score=45.59 Aligned_cols=115 Identities=22% Similarity=0.252 Sum_probs=63.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
.++.+||+|+|.|.+|+++|++|.+ .| .++...|.+-.-.....+.|.....++-.. ..-.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g----~~~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCG----SHPLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEES----CCCGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEEC----CChHHhh
Confidence 4678999999999999999888875 37 468889985311000000011111111100 0111122
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCC
Q 007904 402 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 467 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGS 467 (585)
.. .+|.+|=.++.+ .=++++.++.. ..-||| +.+ |-++...+++.|-.|||
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~~----e~~~~~~~~~~IaVTGT 120 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TEV----ELAYLVSESQLIGITGS 120 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CHH----HHHHHHCCSEEEEEECS
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eHH----HHHHHhcCCCEEEEECC
Confidence 21 167777555554 24677666554 345665 222 33444566788888997
No 188
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=80.17 E-value=2.1 Score=44.84 Aligned_cols=96 Identities=20% Similarity=0.315 Sum_probs=53.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-----------ccCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 394 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-----------~~~~~ 394 (585)
.||+|+|||..|..+++.|.+ .|- .-.++.++|++ .++ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 489999998666666665543 231 01478888874 111 2111111211 11112
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 395 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 395 ~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
.++.++++..++|++|=+++.. +..+++++..+.. ..+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~--~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPY--QDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGG--GHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCcc--cChHHHHHHHHhC-CCEE-EecC
Confidence 4588888888999999776532 3566666654433 3444 2544
No 189
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.14 E-value=2 Score=42.13 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 5899999999999999998763 6 367888874
No 190
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=80.00 E-value=4.5 Score=41.57 Aligned_cols=124 Identities=14% Similarity=0.072 Sum_probs=80.8
Q ss_pred CCCeeeccCCC---chHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 007904 292 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 348 (585)
Q Consensus 292 ~~~~~FnDDiQ---GTaaV~lAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 348 (585)
..|++.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 35555554221 2444567777877653 2456889999999999999999998754
Q ss_pred HhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007904 349 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 424 (585)
Q Consensus 349 ~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi 424 (585)
.|+ +++.+|+... . ....+ .+- -...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~-~~g---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQ-RLG---LRQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHH-HHT---EEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHH-hcC---ceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 365 5888887531 0 10111 110 012379999987 88888542 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCC
Q 007904 425 EAMASFNEKPLILALSNPT 443 (585)
Q Consensus 425 ~~Ma~~~erPIIFaLSNPt 443 (585)
+.|. +..+|.=.|+-.
T Consensus 224 ~~mk---~gailIN~arg~ 239 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGS 239 (330)
T ss_dssp TTSC---TTEEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCc
Confidence 9885 677888887643
No 191
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=79.91 E-value=8.4 Score=39.88 Aligned_cols=209 Identities=15% Similarity=0.109 Sum_probs=117.5
Q ss_pred eeeeecCCCchHHHHHHHHcCCCeeeccCCC---chHHHHHHHHHHHHHHh------------------------C-CCc
Q 007904 272 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTL 323 (585)
Q Consensus 272 lIq~EDf~~~~af~lL~ryr~~~~~FnDDiQ---GTaaV~lAgll~A~r~~------------------------g-~~l 323 (585)
+|+.--.+..|- .+-.--+..+.+.|---- .+|=-+++.+|+..|-. | ..|
T Consensus 88 ~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 366555555442 221122346777775332 34444788888887721 1 468
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|++- . +.. ...+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~--~~~---~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----S--DGV---ERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----C--TTH---HHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----c--hhh---Hhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998864 264 588888641 1 101 0111 01123478898886
Q ss_pred cCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEe-----cCCCCCccee
Q 007904 404 IKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEY 474 (585)
Q Consensus 404 vkptvLIG~S----~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~A-----sGSPf~pv~~ 474 (585)
.|+++=.- ...++++++.++.|. +.-++.=.|+=..--|..-.+|++ +|+.--| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---
Confidence 89887532 224678888888884 567888887644223322333433 4543322 2333221
Q ss_pred CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007904 475 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 521 (585)
Q Consensus 475 ~G~~~~p~Q~NN~yiFPGiglG~l~~~a~~Itd~m~~aAA~aLA~~v 521 (585)
.+.. -=..+|+.+-|=++-.. ....+.|...+++-+....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAI 333 (347)
T ss_dssp TSST--TTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 1111 12478999999876321 2222445555555555544
No 192
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.60 E-value=2.8 Score=42.19 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999998763 63 58888764
No 193
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.58 E-value=4.1 Score=39.56 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=57.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...+ .+-.......++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~-~~g~~~~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAV-DLGIIDEGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHH-HTTSCSEEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CC-----CcEEEEEeCCH-------HHHHHHH-HCCCcccccCCHHHHhcC-C
Confidence 3799999999999999988653 64 13688888741 1111111 000000012457777762 3
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007904 406 PTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 443 (585)
Q Consensus 406 ptvLIG~S~~~g~Ft~evi~~Ma~~-~erPIIFaLSNPt 443 (585)
+|++| ++.++. .++++++.+..+ .+..||.-+||-.
T Consensus 63 aDvVi-lavp~~-~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCHH-HHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCHH-HHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 443332 466777777543 3556777777754
No 194
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=79.54 E-value=3.3 Score=44.47 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=59.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~v~~ 403 (585)
.||.|+|+|..|..+|..|.+. |. +++++|+.. + .+..... ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988753 64 578888741 1 1111111 000 000113578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 404 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 404 v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+ ++|++| ++.+.+...+++++.+..+. +.-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588877 44434445777887776543 356888888865
No 195
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.50 E-value=3.6 Score=44.67 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=61.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~--~~~~~L~e~v~~ 403 (585)
.+|.|+|+|..|..+|..|.+. |. +++++|+. . +........-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988763 63 58888874 1 11111111111110 113678888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 404 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 404 v-kptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+ +||++| ++-+.+..++++++.+..+- +..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 588776 44444445677888776553 567888888854
No 196
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=79.42 E-value=2 Score=43.01 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+...||.|+|+|..|.++|..|.+. |. +++++|+.
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998763 63 57778764
No 197
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=79.14 E-value=0.94 Score=47.02 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=65.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHh
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 401 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~--~~~~~L~e~v 401 (585)
...||.|+|||..|.++|..+... |+ ...+.++|.+-=..++-.-+|.+ ...|.... ....++++ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~-~~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEH-GSLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHH-HGGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhh-hhhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988764 65 24799999731000000001221 12332211 01134544 6
Q ss_pred cccCCcEEE---eccCCCC-----C------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 402 KVIKPTILI---GSSGVGR-----T------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 402 ~~vkptvLI---G~S~~~g-----~------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
++ .|++| |....+| + .-+++++.+.++++.-+|+-.|||.
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv 141 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG 141 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc
Confidence 55 89888 3333333 1 2356778889999999999999997
No 198
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=79.08 E-value=2.4 Score=43.48 Aligned_cols=110 Identities=9% Similarity=0.109 Sum_probs=60.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCC-CccCCchhc--hhhccc------cCCCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE------HEPVNN 396 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~~l~~~k--~~fa~~------~~~~~~ 396 (585)
.||.|+|+|..|..+|..|.++ |.....-..+++++|+..-+... +.+.+.... ..|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 4899999999999999999875 31000000468888875321000 000011000 001000 001246
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----CC-CCcEEEecCCCCC
Q 007904 397 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EKPLILALSNPTS 444 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~----~~-erPIIFaLSNPt~ 444 (585)
+.|+++. +|++|= +..+ -..+++++.++. +. +..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVil-av~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLIF-IVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEEE-CCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEEE-cCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788875 787763 3222 467888888875 33 4568888998654
No 199
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.01 E-value=2.6 Score=41.88 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999988652 63 57888864
No 200
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.99 E-value=1.7 Score=41.94 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=56.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
..||+|.|||-.|..+++.|++ .| .+++.++++. +.+.+. ..+.. +-....++.++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhcC
Confidence 4689999999888888877765 25 3577777641 112211 11111 21222345556654
Q ss_pred cCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g-----------~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++|++|=+.+... ..+..+++.+.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997654321 12667888887666567887544
No 201
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=78.93 E-value=8.3 Score=38.63 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..||.|+|+|..|.++|..|.+. |. ++++++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999999875 63 478899884
No 202
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=78.89 E-value=1.3 Score=45.35 Aligned_cols=89 Identities=21% Similarity=0.309 Sum_probs=52.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc----ccCCCCCHHHHh
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 401 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~----~~~~~~~L~e~v 401 (585)
.||+|+|||-.|--+|+.|.+ ..++.++|+.. +.+... ++++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHH
Confidence 479999999888777766532 13577777631 112111 11221 222234688888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 402 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
+. .|++|-+ .|.-+...++++-.+... . +|-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 75 8998854 455678888887765443 2 455664
No 203
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.75 E-value=4.3 Score=37.94 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=55.4
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch-hhcc-ccCCCCCH
Q 007904 321 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH-EHEPVNNL 397 (585)
Q Consensus 321 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~-~fa~-~~~~~~~L 397 (585)
.+|++.+|+|.|| |-.|..+++.|++ .| .++++++++. .+.+.+..... .+.. |-. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4578899999998 7788778777765 26 3688888741 11000111111 1111 111 566
Q ss_pred HHHhcccCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 398 LDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g~------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.++++ ++|++|=+.+.... -+..+++.+.+..-+-|||.=|
T Consensus 79 ~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 79 SHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 77776 49999977765421 0345666665555455666444
No 204
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=78.70 E-value=2.5 Score=41.52 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..|.+. | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998864 6 357888874
No 205
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=78.55 E-value=5.8 Score=39.06 Aligned_cols=106 Identities=12% Similarity=0.124 Sum_probs=62.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh----chhhcc-ccCCCCC
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 396 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~----k~~fa~-~~~~~~~ 396 (585)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...-. ....+... ...+.. +-....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888887763 52 23677777753211 10111110 111111 1112235
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007904 397 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~~g~F----------------t~evi~~Ma~~~erPIIFaLS 440 (585)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 78888888899999887754321 366888888776666888644
No 206
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=77.80 E-value=7.1 Score=39.23 Aligned_cols=100 Identities=9% Similarity=0.115 Sum_probs=60.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc-CCCCCHHHHhc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVK 402 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~-~~~~~L~e~v~ 402 (585)
+..||.|+|+|..|..+|..|.++ |+. ...+++++|+. ..+ +.+.. +.... .-..+..|+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~----l~~~G~~~~~~~~e~~~ 83 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSA----LRKMGVKLTPHNKETVQ 83 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHH----HHHHTCEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHH----HHHcCCEEeCChHHHhc
Confidence 345899999999999999988763 631 11468888874 110 00111 11110 01246777777
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007904 403 VIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 444 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSNPt~ 444 (585)
. .|++| ++..+ -..+++++.+.... +..+|.-+||..+
T Consensus 84 ~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 84 H--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp H--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred c--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 6 77766 33333 45777888776543 4568888888774
No 207
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=77.79 E-value=9.3 Score=39.45 Aligned_cols=83 Identities=20% Similarity=0.372 Sum_probs=45.8
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc
Q 007904 310 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 388 (585)
Q Consensus 310 Agll~A~r~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa 388 (585)
+..+.|+.... .--..++|+|+|||..|...+.+... .|. ++++.+|+. +.+..++
T Consensus 198 ~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~ 254 (404)
T 3ip1_A 198 SVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLA 254 (404)
T ss_dssp HHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHH
Confidence 33344444333 33457899999998777655444432 374 578887753 2223333
Q ss_pred cc-------cCCCCCHHHHhcc----cCCcEEEeccCC
Q 007904 389 HE-------HEPVNNLLDAVKV----IKPTILIGSSGV 415 (585)
Q Consensus 389 ~~-------~~~~~~L~e~v~~----vkptvLIG~S~~ 415 (585)
+. .....++.+.|+. -+.|++|-+++.
T Consensus 255 ~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 255 KELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred HHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 22 0111345555543 368888877764
No 208
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=77.59 E-value=13 Score=38.25 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=70.5
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007904 320 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 399 (585)
Q Consensus 320 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e 399 (585)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999988653 65 57777763 11 1 111111 11357999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhcc--ccCcEE
Q 007904 400 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW--SKGRAI 462 (585)
Q Consensus 400 ~v~~vkptvLIG~----S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~w--t~Grai 462 (585)
.++. .|+++=. ...-++|+++.++.|. +..++.=.| +-++-=|+|+-. ..|+.-
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~a----RG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA----RGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS----CGGGBCHHHHHHHHHTTCEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecC----ccccccHHHHHHHHHhCCce
Confidence 9987 8988743 1224799999999995 566666544 344444444322 356543
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=77.58 E-value=2.6 Score=42.75 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999988654 32 1368888875
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.32 E-value=3.4 Score=37.55 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=28.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35567999999999999999988642 04 368888874
No 211
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.03 E-value=4 Score=40.78 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+-.||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34447999999999999999999763 63 68888874
No 212
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=76.82 E-value=3.6 Score=40.05 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 367 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD 367 (585)
.||.|+|+|..|..+|..|... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 4899999999999999988652 53 577776
No 213
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=76.42 E-value=7 Score=40.28 Aligned_cols=85 Identities=24% Similarity=0.349 Sum_probs=67.3
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc
Q 007904 303 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 381 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~ 381 (585)
+..-+|-.|++--++..+.+|+..++|++|.+ -.|.-+|.||.. .|. .+.+|.|+
T Consensus 157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------ 212 (303)
T 4b4u_A 157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------ 212 (303)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT------------
T ss_pred cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC------------
Confidence 34457888999999999999999999999975 568888877764 242 35555442
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007904 382 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 425 (585)
Q Consensus 382 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~ 425 (585)
..+|.+.+++ +|+||...+.++.++.++|+
T Consensus 213 ------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 ------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp ------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred ------------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357788886 99999999999999999997
No 214
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=76.34 E-value=1.7 Score=46.69 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345789999999999999999999875 87 789999976
No 215
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.91 E-value=2.4 Score=41.59 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999888652 53 57888764
No 216
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=74.91 E-value=2 Score=48.52 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=33.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 13 ~kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 13 EAVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357889999999999999999999875 87 799999987
No 217
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.83 E-value=3.8 Score=40.69 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..||.|+|+|..|.++|..|... |. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 35899999999999999988653 53 57888874
No 218
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.73 E-value=4 Score=41.18 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|.++|..|.+. |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 52 368888875
No 219
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=74.68 E-value=2 Score=44.72 Aligned_cols=120 Identities=21% Similarity=0.204 Sum_probs=65.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc---cccCCCCCHHHH
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 400 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa---~~~~~~~~L~e~ 400 (585)
++.||+|+|+|.+|-.+|+.|.+. .++.++|+. .++ +......+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 467999999999999888877531 358888874 111 111111111 011122468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCcCCCCHHHHhccccCcEEEecCCCCCcc
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 472 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt~~~E~tpeda~~wt~Grai~AsGSPf~pv 472 (585)
++. +|++|-+. +. .+..+++++-.+. .=.++-+|.-....+.--++|.+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~-P~-~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL-PG-FLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC-CH-HHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECC-Ch-hhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 875 89999763 23 3566676654432 22356677622112222344433 353 33455556654
No 220
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.64 E-value=5.9 Score=38.33 Aligned_cols=90 Identities=10% Similarity=0.073 Sum_probs=48.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 406 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkp 406 (585)
||.|+|+|..|..+|..+... |. +++++|++. +.+...+ .+--......++.++ + ++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~-------~~~~~~~-~~g~~~~~~~~~~~~-~--~~ 58 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQQ-------STCEKAV-ERQLVDEAGQDLSLL-Q--TA 58 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH-------HHHHHHH-HTTSCSEEESCGGGG-T--TC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECCH-------HHHHHHH-hCCCCccccCCHHHh-C--CC
Confidence 799999999999999888652 53 688888641 1111110 000000012345555 3 36
Q ss_pred cEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCC
Q 007904 407 TILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 441 (585)
Q Consensus 407 tvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSN 441 (585)
|++|=+ ..+ -..+++++.+..+. +..+|.-+||
T Consensus 59 D~vi~a-v~~-~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 59 KIIFLC-TPI-QLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp SEEEEC-SCH-HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred CEEEEE-CCH-HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 766632 222 24566776665443 3445555655
No 221
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=74.40 E-value=2.8 Score=41.81 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 376 46777754
No 222
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.84 E-value=8.2 Score=38.43 Aligned_cols=93 Identities=19% Similarity=0.265 Sum_probs=53.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc---cc-------c--CC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HE-------H--EP 393 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa---~~-------~--~~ 393 (585)
.||.|+|+|..|..+|..|.+. | .+++++|++.= .+...++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999888652 5 35888887410 0111111000 00 0 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCC
Q 007904 394 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 441 (585)
Q Consensus 394 ~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~-erPIIFaLSN 441 (585)
..++.++++. +|++|=+.. . -..+++++.++.+. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 787773332 2 23588888886543 3455666644
No 223
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.72 E-value=6.6 Score=38.73 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=60.4
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCc---cCCchhchhhcc-ccCCCC
Q 007904 321 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 395 (585)
Q Consensus 321 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~---~~l~~~k~~fa~-~~~~~~ 395 (585)
+++++.+|+|.|| |-.|..+++.|++ .| .+++++|+.. .... ..+. ...+.. +-....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 7777777766654 25 3688888741 1100 0110 111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC-C------------CHHHHHHHHcCCCCcEEEecC
Q 007904 396 NLLDAVKVIKPTILIGSSGVGRT-F------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 396 ~L~e~v~~vkptvLIG~S~~~g~-F------------t~evi~~Ma~~~erPIIFaLS 440 (585)
++.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 46777876679999988775532 0 345677776665567888644
No 224
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=73.25 E-value=3.2 Score=41.10 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||.||+..|..|.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998865 263 2799999874
No 225
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.20 E-value=4.6 Score=37.22 Aligned_cols=96 Identities=9% Similarity=0.144 Sum_probs=53.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.||+|.|| |-.|-.+++.|++ .| .++++++++. ++.+.+.. ...+.. +-....++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 6666666666553 25 4788888852 11111211 111111 21222457778875
Q ss_pred cCCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g----------~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+.+... ..+..+++.|.+..-+.+||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 899997765431 12456777777665556666433
No 226
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=73.09 E-value=1.3 Score=45.68 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=67.0
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC---cccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 326 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 326 ~riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G---Li~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
.||+|.| ||..|.-+|.+|+. .|+-.++-.-.+.|+|... .+.-...| |.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D-L~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLME-LQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhh-hHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999988888764 2551111111389999852 11110011 3222223332222234688888
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007904 402 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 443 (585)
Q Consensus 402 ~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPI-IFaLSNPt 443 (585)
++ .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 87 89888554433 21 34678889999998874 99999997
No 227
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.99 E-value=2.6 Score=41.24 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 4899999999999999988652 53 58888874
No 228
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=72.89 E-value=6.1 Score=37.91 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
||.|+|+|..|..+|..|.+. |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 799999999999999988753 53 5777665
No 229
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.81 E-value=1.8 Score=38.09 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|+|..|..+|+.|.+ .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 579999999999999998875 26 368889884
No 230
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.80 E-value=1.8 Score=43.15 Aligned_cols=101 Identities=14% Similarity=0.097 Sum_probs=58.8
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc---h---hchhhcc-ccCC
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---H---FKKPWAH-EHEP 393 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~---~---~k~~fa~-~~~~ 393 (585)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.+++..- ...+.+. . ....+.. +-..
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 344578999999 8888888887765 25 35888877520 0000010 0 0001111 1112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 007904 394 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 437 (585)
Q Consensus 394 ~~~L~e~v~~vkptvLIG~S~~~g~-Ft~evi~~Ma~~~-erPIIF 437 (585)
..+|.++++..++|++|=+.+..+. -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888886679999988775432 3788999988766 445554
No 231
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.55 E-value=8.4 Score=37.89 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007904 321 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 399 (585)
Q Consensus 321 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e 399 (585)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+.. +.-+-....++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4577889999998 8888888877765 26 3578887752 11 11111 1112122245777
Q ss_pred HhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007904 400 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~F--------------t~evi~~Ma~~~erPIIFaLS 440 (585)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999877654311 345788888877778998655
No 232
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=71.42 E-value=4.5 Score=41.37 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=64.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCC--CCCHHHHhcc
Q 007904 327 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 403 (585)
Q Consensus 327 riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~--~~~L~e~v~~ 403 (585)
||.|+| +|..|..+|-+|... .++ ...+.++|..-. ..+..-+|.+. ++-..-.. ..+..++.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 799999998777542 244 257999999741 11110012211 11000000 0246678887
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 404 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 404 vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
.|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888555443 31 1256777888999999999999998
No 233
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=71.26 E-value=12 Score=40.61 Aligned_cols=120 Identities=20% Similarity=0.124 Sum_probs=77.2
Q ss_pred CCCeeeccCCCc---hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 007904 292 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 350 (585)
Q Consensus 292 ~~~~~FnDDiQG---TaaV~lAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 350 (585)
..+.+.|----. +|=-++|.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~--- 164 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF--- 164 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC---
Confidence 356666643322 344578888887763 25678999999999999999999988642
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007904 351 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 426 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ft~evi~~ 426 (585)
|+ +++.+|+.- .+ .. .....-...++.|+++. +|+++=+. ...++++++.+..
T Consensus 165 --G~-------~V~~~d~~~----~~----~~----a~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 165 --GA-------YVVAYDPYV----SP----AR----AAQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp --TC-------EEEEECTTS----CH----HH----HHHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred --CC-------EEEEECCCC----Ch----hH----HHhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 64 688888742 11 00 00000011278899986 89887443 2235777777766
Q ss_pred HHcCCCCcEEEecC
Q 007904 427 MASFNEKPLILALS 440 (585)
Q Consensus 427 Ma~~~erPIIFaLS 440 (585)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 64 567888777
No 234
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=71.02 E-value=1.9 Score=46.26 Aligned_cols=182 Identities=16% Similarity=0.206 Sum_probs=96.7
Q ss_pred cccccccCcchHHHHHhcCCCCCeeEEEEee--------------------CcccccCCCCCCcccccchhhHHHHHH--
Q 007904 153 GLYISLKEKGKILEVLKNWPERSIQVIVVTD--------------------GERILGLGDLGCQGMGIPVGKLALYTA-- 210 (585)
Q Consensus 153 Glyls~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LY~a-- 210 (585)
|.|++..|...+..+|+.. +++++++.| |+++=-+-++|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 6666666777788888753 688888854 334444444444334455555443332
Q ss_pred ---hcCCCCCceeeEEeccCCCchhcccCccccccccCCCChhhhHHHHHHHHHHHHHhcCCceeeeeecCCCchHHHHH
Q 007904 211 ---LGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL 287 (585)
Q Consensus 211 ---~gGI~P~~~lPV~LDvGTnne~Ll~DP~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~lL 287 (585)
=-|+. .+-+ + ..+|+ +-.++|++++.+.||- ..| +.+
T Consensus 254 Le~~~GiP---~~~~--~------------~p~G~-----------~~T~~~l~~la~~~g~----~~~--------~~i 293 (458)
T 3pdi_B 254 LAERTGVP---DRRF--G------------MLYGL-----------DAVDAWLMALAEISGN----PVP--------DRY 293 (458)
T ss_dssp HHHHSCCC---EEEE--C------------CSCHH-----------HHHHHHHHHHHHHHSS----CCC--------HHH
T ss_pred HHHHHCCC---EEec--C------------CCcCH-----------HHHHHHHHHHHHHHCC----chH--------HHH
Confidence 12443 2211 0 11121 2268888898888863 122 123
Q ss_pred HHHcCCCeeeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEc
Q 007904 288 AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 367 (585)
Q Consensus 288 ~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD 367 (585)
++.|.+ ++.++.-....|...|++|+|.+.-..|+++.|.+ .|+. -+.+.-
T Consensus 294 ~~er~r------------------~~~~~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~~~ 344 (458)
T 3pdi_B 294 KRQRAQ------------------LQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAH------TVAAVV 344 (458)
T ss_dssp HHHHHH------------------HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCE------EEEEEE
T ss_pred HHHHHH------------------HHHHHHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCE------EEEEEE
Confidence 333321 12222222345788999999999999999998843 4872 222221
Q ss_pred CCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC
Q 007904 368 SKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG 414 (585)
Q Consensus 368 ~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~ 414 (585)
.. ..+.+... +...- ..+...+++.++..+||.+||-|-
T Consensus 345 ~~------~~~~~~~~--~~~~v~~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 345 PA------RAAALVDS--PLPSVRVGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp SS------CCSCCTTT--TSSCEEESHHHHHHHHHHHHTCSEEEECTT
T ss_pred CC------CChhhhhC--ccCcEEeCCHHHHHHHHHhcCCCEEEEChh
Confidence 11 11111110 00000 011124777888999999999554
No 235
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=70.84 E-value=4.5 Score=37.40 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=54.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh-----chhhcc-ccCCCCCHH
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 398 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~-----k~~fa~-~~~~~~~L~ 398 (585)
.+|+|.|| |-.|-.+++.|++. .| -++++++++. + ..+... +..+.. |-....++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 77777777777621 36 3688887751 1 012111 011111 111223577
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEec
Q 007904 399 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 439 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaL 439 (585)
++++. +|++|=+.+..+.-++.+++.|.+..-+-|||.=
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEe
Confidence 77774 8999977765432277788888765545566643
No 236
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=70.72 E-value=7.7 Score=37.80 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=56.7
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh----chhhcc-ccCCCCCH
Q 007904 324 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNNL 397 (585)
Q Consensus 324 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~----k~~fa~-~~~~~~~L 397 (585)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++.--.. .+.+... +..+.. |-....++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4578999998 7777777777654 26 36888887421000 0000000 011111 11122357
Q ss_pred HHHhcccCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 007904 398 LDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 440 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g~------F----------t~evi~~Ma~~~e-rPIIFaLS 440 (585)
.++++.+++|++|=+.+.... + |..+++.+.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 778888889999988875421 0 3345555554443 67888644
No 237
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=70.61 E-value=13 Score=36.73 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=58.7
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch-hchhhcc-ccCCCCCHH
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLL 398 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~-~k~~fa~-~~~~~~~L~ 398 (585)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+.. .+..+.. +-....++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999996 7777777776654 25 4688888752 111011211 0111111 111223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 399 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~-------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++++..++|++|=+.+.... -+..+++.+.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 77877789999988775432 0345777777665568888544
No 238
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=69.73 E-value=12 Score=36.30 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=58.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+..+ +. ...+.. +-. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888877765 25 368888885 22111 21 111211 222 345667777
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++|++|=+.+..+. -|..+++.+.+..-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988775432 1467888888776666888544
No 239
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=69.30 E-value=11 Score=37.29 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=25.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+| +|..|..+|..|... |. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988653 63 58888864
No 240
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=68.92 E-value=3.6 Score=46.79 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=31.9
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 3789999999999999999988764 87 799999986
No 241
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=68.78 E-value=5.1 Score=32.82 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=49.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhch---hhcc-ccCCCCCHHHH
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLDA 400 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~---~fa~-~~~~~~~L~e~ 400 (585)
..+|+|+|+|..|..+++.|.. .|. .+++++|++. .+ +...+. .+.. +.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHHH
Confidence 4689999999999999888765 252 4688888741 11 111110 0100 11111346666
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcC
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASF 430 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~ 430 (585)
++ ++|++|=+.+ ..++..+++.+.+.
T Consensus 67 ~~--~~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LG--GFDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp TT--TCSEEEECSC--GGGHHHHHHHHHHT
T ss_pred Hc--CCCEEEECCC--chhhHHHHHHHHHh
Confidence 66 4899886653 34667777766543
No 242
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=68.66 E-value=3.7 Score=40.80 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..||.|+|+|..|.++|..|.+. |. +++++|+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 36899999999999999998763 63 68888874
No 243
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=71.66 E-value=1 Score=42.76 Aligned_cols=92 Identities=11% Similarity=0.080 Sum_probs=53.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 402 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~ 402 (585)
+.+.||.|+|+|..|..+|..|.+. |. +++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888653 42 4677776421 1 111 111111125666666
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 403 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
. +|++| ++..+. .+++++ ..+...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 77766 333332 345555 233233456888888876
No 244
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.43 E-value=4.5 Score=38.39 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+..|..|.+. |. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----RK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCC
Confidence 5899999999999999888652 63 68899974
No 245
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=68.42 E-value=14 Score=34.28 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=55.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-cccCCCCCHHHH
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 400 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-~~~~~~~~L~e~ 400 (585)
++..+++|.|| |-.|-.+++.|++. |. ..+++++|++. .+.+.+......+. -|-....++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999996 66677777766652 52 12788888752 11111111111111 121122356666
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 401 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~-------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 59999988775310 1345666666555455666544
No 246
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=68.41 E-value=4 Score=39.65 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998865 364 589999864
No 247
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=68.37 E-value=5.6 Score=33.61 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|+|..|..+|+.|.+ .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888765 25 368888874
No 248
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.98 E-value=5 Score=38.79 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=23.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999888742 42 47788764
No 249
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=67.91 E-value=17 Score=35.15 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=43.2
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007904 320 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 399 (585)
Q Consensus 320 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e 399 (585)
..+++++++||.||++ ||..-++..+.+ .| -+++++|++.- .+......+.-|-....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 444445555544 36 35888876421 111111112112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007904 400 AVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 400 ~v~~v-----kptvLIG~S~~~ 416 (585)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 55554 799999776643
No 250
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=67.89 E-value=4.9 Score=40.49 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=28.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988865 364 6888887643
No 251
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.84 E-value=4.9 Score=39.25 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||.||+..|..|.+ .|+ ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988754 253 689999864
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.83 E-value=5 Score=38.42 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.||+..|..|.+. |. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46899999999999999888652 63 58999997
No 253
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=66.79 E-value=4.9 Score=41.20 Aligned_cols=36 Identities=31% Similarity=0.476 Sum_probs=29.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 589999999999999998865 3642 37999998753
No 254
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=66.73 E-value=4.7 Score=39.67 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988865 375 46777764
No 255
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=66.60 E-value=7.5 Score=39.49 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=26.5
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 398 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 4567888999999987643 122223355668899975555
No 256
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=66.58 E-value=3 Score=45.83 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 457889999999999999999999864 87 899999976
No 257
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=66.18 E-value=4.9 Score=41.89 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=31.5
Q ss_pred HhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 318 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 318 ~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 344444567999999999999999888652 5 36888887644
No 258
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=66.00 E-value=5.4 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|||+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988765 253 68899886
No 259
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.90 E-value=4.4 Score=42.14 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||||+|+|.||+..|..|.+. +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 260
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.51 E-value=5.8 Score=34.27 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=26.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+..+|+|+|+|..|..+|+.|.+ .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999998875 263 68888874
No 261
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=65.48 E-value=9.9 Score=39.10 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=29.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 364 2469999886543
No 262
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=64.96 E-value=4.8 Score=38.63 Aligned_cols=90 Identities=11% Similarity=0.150 Sum_probs=53.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
.||.|+|+|..|..+|..|.. .| .+++++|++ . +........+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887753 24 468888763 1 1111111111 11123568888874
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007904 406 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 443 (585)
Q Consensus 406 ptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSNPt 443 (585)
+|++|=+.. + ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888874433 3 34567776653 334666665543
No 263
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=64.89 E-value=25 Score=34.96 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=60.8
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch-hchhhcc-ccC-CCCCH
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 397 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~-~k~~fa~-~~~-~~~~L 397 (585)
.+...+|+|.|| |-.|..+++.|++. .| .+++.+|+.. .+...+.. ....+.. +-. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999996 88888888877653 24 4688888742 11111111 1111211 111 22347
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 007904 398 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 398 ~e~v~~vkptvLIG~S~~~g----------------~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 777875 999997665432 23567899988877 88988765
No 264
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=64.87 E-value=6.8 Score=37.60 Aligned_cols=86 Identities=10% Similarity=0.230 Sum_probs=53.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
||+|.|| |-.|-.+++.|+ . | .+++.+|+..-... -+-....++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--------------~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--------------GDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--------------CCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--------------ccCCCHHHHHHHHHhcC
Confidence 7899998 777777776664 2 4 46888877531110 01111235777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 406 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 406 ptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14567777765544 5887654
No 265
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=64.44 E-value=5.8 Score=40.71 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=30.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35789999999999999999865 3642 46999988643
No 266
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.34 E-value=6.5 Score=35.06 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-+++|+|+|.+|+-.|..|.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 468888875
No 267
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=64.30 E-value=5.5 Score=38.87 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 4689999999999999988765 263 68999987
No 268
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=64.26 E-value=18 Score=39.42 Aligned_cols=98 Identities=16% Similarity=0.254 Sum_probs=55.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc-hhchhhccccCCCCC----HHH
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEHEPVNN----LLD 399 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~-~~k~~fa~~~~~~~~----L~e 399 (585)
+.||||+|||+.|-++|.+|.+- .++. ..+|.+.|+.-- +.+ +. ....++....-...+ |..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~-~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVD-VAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCC-HHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhh-HHhhcCCceeEEeccchhHHHHHHH
Confidence 57899999999999999999874 3442 146888887421 111 11 111122211111122 334
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007904 400 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 400 ~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
+|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 5554 59999655 335778888776532 223455665
No 269
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.95 E-value=5.7 Score=40.53 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4688888764
No 270
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=63.85 E-value=6.6 Score=40.06 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 375 3377787753
No 271
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=63.82 E-value=8.9 Score=39.03 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=52.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc-cCCCCCHHHHh
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 401 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v 401 (585)
|+..+|.|+|+|..|..+|..|... |. +++++|+.. .+ . ...+.. .-...++.|++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~----~~------~-~~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG----SA------T-VAKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT----CH------H-HHHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh----HH------H-HHHHHHCCCEEccHHHHH
Confidence 3456899999999999999888653 64 477777642 10 0 011111 00112688888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 007904 402 KVIKPTILIGSSGVGRTFTKEVIE-AMASFN-EKPLIL 437 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~Ft~evi~-~Ma~~~-erPIIF 437 (585)
+. +|++| ++.++.. .+++++ .++.+. +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 75 88887 4444433 378887 766543 334444
No 272
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=63.73 E-value=4.9 Score=38.89 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888763 64 58889884
No 273
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=63.72 E-value=19 Score=36.77 Aligned_cols=91 Identities=22% Similarity=0.314 Sum_probs=53.2
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccC
Q 007904 300 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 379 (585)
Q Consensus 300 DiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~ 379 (585)
+.++.....++..+.+++..+.+ .+++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554445566667777666554 46799999998776555444432 374 578877763
Q ss_pred Cchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEeccC
Q 007904 380 LQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSG 414 (585)
Q Consensus 380 l~~~k~~fa~~-------~~~~~~L~e~v~~---v---kptvLIG~S~ 414 (585)
+.+..+++. .....++.+.++. . +.|++|=+++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 222333332 0112356666654 1 5788887766
No 274
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=63.68 E-value=7.1 Score=40.28 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3468999999999999999881 123 579999886443
No 275
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=63.51 E-value=12 Score=37.44 Aligned_cols=86 Identities=19% Similarity=0.079 Sum_probs=54.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
+.||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 469999999 98887666665442 53 35677777411 00 0 01 11123678898875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 007904 404 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 436 (585)
Q Consensus 404 vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPII 436 (585)
.+||+.|= .+++ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI-~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVI-YVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEE-CCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEE-ecCH-HHHHHHHHHHHHCCCCEEE
Confidence 56998884 3433 5889999998887766533
No 276
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=63.00 E-value=8.7 Score=38.83 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+-+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987754 374 5889998743
No 277
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=62.89 E-value=10 Score=36.13 Aligned_cols=93 Identities=14% Similarity=0.192 Sum_probs=55.3
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
.++..+|+|.|| |-.|..+++.|++ .|-. .....- .+...+ -+-....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---cccccc--------------ccCcee----cccCCHHHHHHH
Confidence 356789999997 8888777777764 2530 000000 010000 011112357788
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 401 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~-----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++..++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1235788887776667888544
No 278
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=62.78 E-value=6.9 Score=38.23 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988875 364 68899987
No 279
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=62.72 E-value=6.9 Score=39.73 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.-+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888663 74 577888764
No 280
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.55 E-value=7.8 Score=39.35 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=27.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35689999999999999988875 364 577777653
No 281
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=62.46 E-value=6.5 Score=39.96 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345689999999999999988764 364 688898864
No 282
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=62.43 E-value=7.2 Score=37.58 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|+|.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988865 264 278999985
No 283
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=62.33 E-value=9.2 Score=37.10 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=54.6
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
..+|+|.|| |-.|-.+++.|++ .|. +++++++. ...| +. ...++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 7777777776654 252 46666543 1111 21 11346677776
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~-----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 1345677777666567888654
No 284
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=62.32 E-value=16 Score=34.62 Aligned_cols=78 Identities=13% Similarity=0.204 Sum_probs=42.3
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007904 320 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 399 (585)
Q Consensus 320 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e 399 (585)
..++++.+++|.||+. ||...++..+.+ .| -+++++|++- .+ +.... .+.-|-....++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHHH
Confidence 3457888999999743 444445555544 36 3688888741 11 21111 12112112223555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007904 400 AVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 400 ~v~~v-----kptvLIG~S~~~ 416 (585)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999777654
No 285
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=62.13 E-value=24 Score=34.16 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=53.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6677666666643 24 344444321 11111111111111112233 56888887 5
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 007904 406 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 406 ptvLIG~S~~~g~-F---------------t~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|-+.+.+.. . |..+++.|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778887777778998655
No 286
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=62.03 E-value=6.8 Score=38.10 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..|+|+|||.+|+..|..|.+. |+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 4799999999999999988763 75 588888763
No 287
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=61.99 E-value=7.2 Score=38.77 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998876 264 6899998643
No 288
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.98 E-value=18 Score=32.87 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++..+.+++....--.+++++|.|| |..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 44444555544333345689999994 77777777766542 6 257777763
No 289
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.97 E-value=8 Score=38.82 Aligned_cols=49 Identities=22% Similarity=0.238 Sum_probs=32.4
Q ss_pred HHHHHHHHHH-HhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 308 VLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 308 ~lAgll~A~r-~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++..+.+++ ..+. ..++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 149 ~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 198 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN 198 (343)
T ss_dssp HHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 4444566676 4433 88999999998777666655432 363 468888763
No 290
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=61.85 E-value=6.3 Score=46.68 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 457899999999999999999999886 87 899999986
No 291
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=61.67 E-value=13 Score=38.43 Aligned_cols=89 Identities=8% Similarity=0.098 Sum_probs=52.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~--~~~~~L~e~v~~ 403 (585)
.||.|+|+|..|..+|..|... | .+++++|++- +.+. .+... ....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAK-----SAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHH-----HHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHH-----HHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988763 5 3688888741 1111 11110 112466676654
Q ss_pred c--CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007904 404 I--KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 v--kptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
. .+|++| ++.+.. -++++++.++.+.+.-||.=.|
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 2 467666 444332 4567777666554444554333
No 292
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=61.66 E-value=7.1 Score=38.88 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988865 364 577888765
No 293
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=61.40 E-value=7.5 Score=39.52 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999988763 63 688888753
No 294
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=61.32 E-value=15 Score=35.61 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=56.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+.. ...+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777664 25 3688887631 110011211 111111 11122346777775
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677777665567888644
No 295
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=61.32 E-value=28 Score=36.02 Aligned_cols=136 Identities=6% Similarity=-0.002 Sum_probs=88.3
Q ss_pred HHHHHHHHHhcCCceeeeeecCCCchHHHHHHHHcCCCeeec--cCCCchHHHHHHHHHHHHHHhC------CCcccceE
Q 007904 257 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRF 328 (585)
Q Consensus 257 defv~av~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~~~Fn--DDiQGTaaV~lAgll~A~r~~g------~~l~d~ri 328 (585)
...++ +-.+| .+++ -+-.++ ..+.+.|.+|- ++||.| || .---+=+||=++.-.+..| +++++.||
T Consensus 91 ~DTar-vls~~-~D~i-viR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~v 164 (328)
T 3grf_A 91 QDTAE-VFSRM-VDIC-TARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKF 164 (328)
T ss_dssp HHHHH-HHTTT-CSEE-EEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCE
T ss_pred HHHHH-HHHhh-CCEE-EEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEE
Confidence 33444 34456 5543 355453 35555666664 689999 76 5666778888888777777 37999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc---c---CCCCCHHHHhc
Q 007904 329 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVK 402 (585)
Q Consensus 329 v~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~---~---~~~~~L~e~v~ 402 (585)
+++|-+.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+...-+.++.. . ....++.|+|+
T Consensus 165 a~vGD~~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~ 233 (328)
T 3grf_A 165 AYCGDSMN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCE 233 (328)
T ss_dssp EEESCCSS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHT
T ss_pred EEeCCCCc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhc
Confidence 99999852 578888887766 475 699999988863111 1122222233322 1 12368999999
Q ss_pred ccCCcEEEe
Q 007904 403 VIKPTILIG 411 (585)
Q Consensus 403 ~vkptvLIG 411 (585)
. .||+.-
T Consensus 234 ~--aDvvyt 240 (328)
T 3grf_A 234 G--VDVVYT 240 (328)
T ss_dssp T--CSEEEE
T ss_pred C--CCEEEe
Confidence 7 999974
No 296
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=61.23 E-value=7.2 Score=37.92 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988865 263 58899984
No 297
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=61.19 E-value=13 Score=35.67 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=57.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 404 (585)
||+|.|| |-.|-.+++.|.+. .| .++..++++.- +...+......+.. |-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88888887775431 14 45777766421 11111111111211 11222457788875
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 007904 405 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 405 kptvLIG~S~~~g~------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.|++|=+++.... -++.+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765421 2567888888777677888544
No 298
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.16 E-value=22 Score=34.70 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=58.1
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh----------hcc-ccC
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----------WAH-EHE 392 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~----------fa~-~~~ 392 (585)
..+|+|.|| |-.|..+++.|++ .| .+++++|+.. . ........ +.. +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 36 3688887641 1 11111111 111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 393 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 393 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
...++.++++..++|++|=+.+.... -|..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 12357778876789999987775421 1446788888777678998654
No 299
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.15 E-value=7 Score=37.36 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEE-EcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~ 369 (585)
..+|||+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 64 3556 8873
No 300
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=61.12 E-value=7.1 Score=39.44 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 374 588888764
No 301
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=61.03 E-value=8.5 Score=33.92 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+.+|+|+|+|..|..+++.|.+. | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 356899999999999999988652 5 468888874
No 302
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=61.02 E-value=7.5 Score=38.75 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998875 264 599999874
No 303
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=60.94 E-value=46 Score=34.72 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=83.3
Q ss_pred HHhcCCceeeeeecCCCchHHHHHHHHcCCCeeec--cCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHH
Q 007904 264 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 341 (585)
Q Consensus 264 ~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~~~Fn--DDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA 341 (585)
-.+| .++++ +--++ ..+.+.|.+|- ++||.| || .---+=+||=++.-.+..| +|++.||+++|-| . -+|
T Consensus 122 Ls~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nva 192 (340)
T 4ep1_A 122 LSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NVC 192 (340)
T ss_dssp HHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HHH
T ss_pred HHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hhH
Confidence 3456 55544 44443 35555666664 689998 55 4455667888877777666 5999999999998 3 378
Q ss_pred HHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEeccC
Q 007904 342 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 414 (585)
Q Consensus 342 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~e~v~~vkptvLIG~S~ 414 (585)
+-++.++.+ .|+ +|.++-.+|+.-+. .+-..-+.+|... ....++.|+|+. .||+.-..=
T Consensus 193 ~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w 256 (340)
T 4ep1_A 193 HSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVW 256 (340)
T ss_dssp HHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC
T ss_pred HHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCc
Confidence 888777766 475 68889888874321 1111112233221 113589999998 999987653
No 304
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=60.80 E-value=13 Score=36.12 Aligned_cols=79 Identities=13% Similarity=0.150 Sum_probs=43.2
Q ss_pred CcccceEEEeCcc-h--HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc------cccC
Q 007904 322 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA------HEHE 392 (585)
Q Consensus 322 ~l~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa------~~~~ 392 (585)
.+++.+++|.||. . .|..||+.+.+ .| -+++++|+.-+ . +.+...+..+. -|-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 45556665543 36 36888888641 0 11111111111 1111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCCC
Q 007904 393 PVNNLLDAVKVI-----KPTILIGSSGVGR 417 (585)
Q Consensus 393 ~~~~L~e~v~~v-----kptvLIG~S~~~g 417 (585)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 122455555554 7999998777553
No 305
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=60.76 E-value=7.4 Score=38.70 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
..|+|+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988752 63 68999987543
No 306
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=60.50 E-value=7.9 Score=38.41 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999987754 263 688999864
No 307
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=60.23 E-value=27 Score=31.50 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=52.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh--chhhcc-ccCCCCCHHHHhc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 402 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~--k~~fa~-~~~~~~~L~e~v~ 402 (585)
||+|.|| |-.|..+++.|++ .| .+++.++++. +.+... ...+.. +-.+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7778777777764 25 4688887741 111110 011111 1111111 6676
Q ss_pred ccCCcEEEeccCCCCC-------CCHHHHHHHHcCCCCcEEEecC
Q 007904 403 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~-------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
. +|++|=+.+.+.. .++.+++.|.+.....+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988776432 1367888887665566777544
No 308
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.22 E-value=11 Score=34.99 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=38.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc-
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 404 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v- 404 (585)
+++|.|| |-.|..+++.|++ .| .+++++|++. . .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899988 5555556655543 36 3688888741 1 1111 1111111113466666655
Q ss_pred -CCcEEEeccCCC
Q 007904 405 -KPTILIGSSGVG 416 (585)
Q Consensus 405 -kptvLIG~S~~~ 416 (585)
++|+||=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 309
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=59.97 E-value=8.4 Score=40.88 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...+|+|+|+|.||+..|..|.+. |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999998763 63 58899885
No 310
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=59.75 E-value=7.6 Score=39.94 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=28.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
....+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 335667899999999999999988764 4 146899998
No 311
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=59.74 E-value=9.3 Score=38.22 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~-~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+..|+|+|||.+|+.+|-.|.+ . |. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----GI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----CC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----CC------CcEEEEeCCC
Confidence 5689999999999999998876 3 51 3689999875
No 312
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=59.26 E-value=7.6 Score=40.63 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
||||+|+|.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 53 23688998754
No 313
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=59.21 E-value=7.8 Score=38.97 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.++..+.|++..+. ..++|+|+|||..|..++.++.. .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444566644333 88999999998877766665543 364 46887776
No 314
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=59.17 E-value=16 Score=35.33 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 404 (585)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +-....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6666666666653 36 3677777621 111011111 111111 111123466777766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 405 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 405 kptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345677776665567888644
No 315
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=59.12 E-value=7.4 Score=41.56 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999988763 5 368888875
No 316
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=58.94 E-value=8.6 Score=40.16 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987765 25 379999986
No 317
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=58.61 E-value=8.4 Score=39.43 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 374 379999987553
No 318
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=58.56 E-value=10 Score=39.12 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
..+|||+|||.||+..|..|.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988764 64 1369999987644
No 319
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=58.48 E-value=9.4 Score=38.38 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888763 64 577888764
No 320
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=58.43 E-value=7.8 Score=40.24 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988865 3641 378899986
No 321
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=58.25 E-value=8.1 Score=38.25 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999888753 64 68999987543
No 322
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=58.20 E-value=7.7 Score=37.96 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++.++||+|+|..|..-+++|+++ | .++.+++.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 47889999999999999999888764 5 368888864
No 323
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=57.81 E-value=12 Score=35.03 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=55.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 400 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 400 (585)
..-.+|+|.|| |-.|..|++.|++ .|- -++++++++. ++...+......+.. |-.+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 6677777666653 251 3677777652 111111111111111 21222357777
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 007904 401 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~--Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554332 2566788887665555666544
No 324
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=57.78 E-value=30 Score=36.98 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..||.|+|+|.-|+.+|..+.+. | .+++++|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999998763 5 468888875
No 325
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=57.68 E-value=11 Score=37.62 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 36 3699999864
No 326
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=57.44 E-value=10 Score=36.00 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=25.9
Q ss_pred CCcccceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++++.++||.||+ ..|..+|+.|.+ .| -+++++|+.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVG 49 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecc
Confidence 56889999999985 345556665554 36 368888875
No 327
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=57.43 E-value=22 Score=34.58 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=53.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. ...+.+......+.. +-....++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8788778777765 25 3688888742 111112111111211 11122356777774
Q ss_pred cCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~F--------------t~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+.+..+.. +..+++++.+..-+.|||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777665567888544
No 328
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=56.94 E-value=16 Score=36.90 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 344455666655443 46799999998777666554432 364 57888875
No 329
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=56.78 E-value=9.8 Score=41.34 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=29.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 364 589999874
No 330
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=56.75 E-value=10 Score=36.34 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=54.4
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
-...+|+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +.+ ..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHHH
Confidence 35678999987 7777777766653 25 368888774 111 221 12466777
Q ss_pred cccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 402 KVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+.+++|++|=+.+.... -+..+++.+.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76689999988875431 03566777766554 7888655
No 331
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=56.75 E-value=6.7 Score=37.87 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...+|+|+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 35689999999999999988865 264 57788854
No 332
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=56.75 E-value=11 Score=36.47 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=42.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-------cccCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 393 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-------~~~~~ 393 (585)
.+|++++++|.||++ ||..-++..+.+ +| -+++++|++- +.+......+. -|-..
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLPE-------TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT-------SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCCC
Confidence 367888999999853 333444444444 36 3688888751 12222221111 11111
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007904 394 VNNLLDAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 394 ~~~L~e~v~~v-----kptvLIG~S~~~ 416 (585)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 22455555544 799999777654
No 333
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=56.74 E-value=8.9 Score=40.42 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+..|..|.+... .|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~--~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE--KGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH--TTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhh--cCCCC----CcEEEEEcC
Confidence 489999999999999999876321 36520 138888876
No 334
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=56.49 E-value=28 Score=33.43 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=40.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHh
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 401 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v 401 (585)
+++++++|.||++ ||..-++..+.+ +| -+++++|++- . .....+..+.. |-....++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----K---PSADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---CCSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----h---hcccCceEEEEccCCCHHHHHHHH
Confidence 5678899999853 333444444444 36 3688888751 1 11111111211 222223455556
Q ss_pred ccc-----CCcEEEeccCCC
Q 007904 402 KVI-----KPTILIGSSGVG 416 (585)
Q Consensus 402 ~~v-----kptvLIG~S~~~ 416 (585)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 544 799999777643
No 335
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=56.44 E-value=10 Score=38.21 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=29.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999988875 374 58999987654
No 336
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=56.41 E-value=14 Score=40.66 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
.++.+|+|+|||.||+..|-.|.+ .|+ ++.++|+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 456899999999999999987765 364 6899999843
No 337
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=56.35 E-value=20 Score=32.89 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=51.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCC-CCCHHHHhcc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 403 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~-~~~L~e~v~~ 403 (585)
||+|.|| |-.|-.+++.|++ .| -+++.++++.- +...+ .+..+.. |-.. ..++.++++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 7899995 6666666665543 35 46888887521 11111 1111111 2122 2346666764
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~--------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1456777776655455666443
No 338
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=56.09 E-value=8 Score=37.63 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
...+|+|+|||.||+..|..|.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 356899999999999999988652 64 5788887
No 339
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=55.94 E-value=37 Score=34.15 Aligned_cols=98 Identities=17% Similarity=0.124 Sum_probs=56.2
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 402 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~ 402 (585)
..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +-....++.++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVTE 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHhC
Confidence 468999998 7777777777764 25 3688888752 111111111111211 1112234677776
Q ss_pred ccCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 007904 403 VIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 403 ~vkptvLIG~S~~~g~--F---------------t~evi~~Ma~~~erPIIFaLS 440 (585)
++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 93 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp --TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999988775432 1 235667776665567887544
No 340
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=55.86 E-value=9.5 Score=39.90 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 46899999999999999988763 013 47899988654
No 341
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=55.75 E-value=20 Score=36.03 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=57.6
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 398 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~-~~k~~fa~-~~~~~~~L~ 398 (585)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. ..+..+.. +-....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 456679999997 7777777777764 251 46888877421 1001121 00111111 111112455
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 007904 399 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 440 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~-~erPIIFaLS 440 (585)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 69999988775431 145567777665 4567887544
No 342
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=55.68 E-value=13 Score=40.18 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=20.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998666556555544 262 58888774
No 343
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=55.59 E-value=7.4 Score=37.13 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=23.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 344445554444 36 358888764
No 344
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=55.54 E-value=19 Score=35.92 Aligned_cols=31 Identities=29% Similarity=0.502 Sum_probs=24.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
+||-|+|-|..|.++|..|+++ |. +++++|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999999864 64 6788886
No 345
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=55.54 E-value=11 Score=38.05 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888763 6 4688888763
No 346
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=55.50 E-value=8.8 Score=36.98 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=57.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 403 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 403 (585)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|+.. .. ..+.+ +..+.. +-....++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888887776520 12 3688887641 11 00110 111111 11122357778887
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~---------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.++|++|=+.+.... -|..+++.+.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 789999988775421 1345677777655567887533
No 347
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=55.44 E-value=9.6 Score=41.43 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 364 689999864
No 348
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=55.43 E-value=11 Score=38.29 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+|+|+|||.+|+..|-.|.+. | .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 799999999999999888763 6 36888887643
No 349
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.43 E-value=11 Score=39.20 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999887653 5 368999986
No 350
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=55.38 E-value=11 Score=39.08 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999998774311 3 4688888764
No 351
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=55.32 E-value=10 Score=36.30 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=23.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++.+++|.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 46778999999843 333444444444 36 368888774
No 352
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=55.17 E-value=77 Score=32.44 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhcCCceeeeeecCCCchHHHHHHHHcCCCeeec--cCCCchHHHHHHHHHHHHHHhCCCcc-cceEEEeC
Q 007904 256 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 332 (585)
Q Consensus 256 idefv~av~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~~~Fn--DDiQGTaaV~lAgll~A~r~~g~~l~-d~riv~~G 332 (585)
+...++.+ .+| .+++ -+-.++ ..+.+.|.+|- ++||.| || .---+=+||=++.-.+..| +|+ +.||+++|
T Consensus 81 l~DTarvl-s~~-~D~i-viR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVI-GAM-VDFV-MMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHH-HHH-SSEE-EEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEES
T ss_pred HHHHHHHH-HHh-CCEE-EEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEc
Confidence 33444433 456 5543 344444 45555666665 689998 65 5555667787777655554 799 99999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcE
Q 007904 333 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 408 (585)
Q Consensus 333 AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~e~v~~vkptv 408 (585)
-|. -+|+-++.++.+ .|+ +|.++-.+|+..+. .+-..-+.+|+.. ....++.|+|+. .||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 973 478888877766 475 68889888874321 1111112233221 123689999997 999
Q ss_pred EEecc
Q 007904 409 LIGSS 413 (585)
Q Consensus 409 LIG~S 413 (585)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98654
No 353
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=55.16 E-value=10 Score=39.86 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 369999986
No 354
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=55.14 E-value=8.2 Score=39.91 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhc-CeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~-~~i~lvD~~GL 371 (585)
...|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999998764 31 000 46889988753
No 355
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=55.01 E-value=7.7 Score=37.07 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=54.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 404 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 404 (585)
.||+|.|| |-.|..+++.|++ .| .+++.+++. ..| +. ...++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhc
Confidence 38999997 7777777766654 24 368888871 111 22 113477788877
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 405 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 405 kptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
++|++|=+.+.... .+..+++.+.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999988775531 03457777776655 4887654
No 356
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=54.79 E-value=27 Score=32.70 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=24.6
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+++.+++|.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 333444454444 36 368888875
No 357
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=54.78 E-value=10 Score=39.97 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+-+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3689999999999999988865 26 3689999754
No 358
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.55 E-value=9.8 Score=40.08 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998865 26 4699999863
No 359
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=54.52 E-value=29 Score=32.90 Aligned_cols=37 Identities=19% Similarity=0.339 Sum_probs=24.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++++.+++|.||++ ||..-++..+.+ +| -+++++|++
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999853 333444444444 36 368888874
No 360
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=54.38 E-value=9.8 Score=39.90 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
++.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999988865 25 3699999864
No 361
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=54.17 E-value=29 Score=34.38 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=32.2
Q ss_pred CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 302 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 302 QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
++...-.++..+.+.+..+. -.+++++|.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 44433334444455555444 4578999999998875544333 32 364 56777765
No 362
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=53.74 E-value=25 Score=35.64 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
+....+.|++..+.....++|+|.|||..|..++.++.. .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 334445677766655478999999999877766655543 362 5777775
No 363
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=53.65 E-value=23 Score=35.99 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=28.5
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 313 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 313 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
+.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333333457899999999877666555433 264 57888875
No 364
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=53.64 E-value=1e+02 Score=31.49 Aligned_cols=129 Identities=13% Similarity=0.168 Sum_probs=83.7
Q ss_pred HHhcCCceeeeeecCCCchHHHHHHHHcCCCeeec--cCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHH
Q 007904 264 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 341 (585)
Q Consensus 264 ~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~~~Fn--DDiQGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA 341 (585)
-.+| .++ |-+-.++ +.+.+.|.+|-.++||.| |...---+=+||=++.-.+..| +|++.||+++|-|.=+ -+|
T Consensus 95 ls~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rva 169 (310)
T 3csu_A 95 ISTY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-RTV 169 (310)
T ss_dssp HTTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-HHH
T ss_pred HHHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-chH
Confidence 4567 454 4455554 455667778875799999 4244445567777777666665 7999999999987421 356
Q ss_pred HHHHHHHHhhc-CCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccC----CCCCHHHHhcccCCcEEEeccC
Q 007904 342 ELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE----PVNNLLDAVKVIKPTILIGSSG 414 (585)
Q Consensus 342 ~ll~~~~~~~~-Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~----~~~~L~e~v~~vkptvLIG~S~ 414 (585)
+-++.++.+ . |+ +|.++-.+|+-.. +.-..+++... ...++.|+|+. +||+.-..-
T Consensus 170 ~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 170 HSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 777777665 4 74 6888988887332 22222333211 13689999997 999997643
No 365
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=53.61 E-value=9.5 Score=37.59 Aligned_cols=101 Identities=13% Similarity=0.173 Sum_probs=59.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhc----------hhhcc-c
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 390 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k----------~~fa~-~ 390 (585)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999997 7888878777765 25 46888887421 1000011110 01111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 391 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 391 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
.....++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 111234677777 59999988875321 1345788888777678998643
No 366
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.53 E-value=12 Score=38.69 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+|||+|||.||+..|..|.+. . .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 1 13 4788888864
No 367
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=53.51 E-value=9.6 Score=36.21 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=53.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 404 (585)
||+|.|| |-.|..+++.|++. ..| .+++.++++. .+...+......+.. +-....++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777666531 003 3578887641 110001111111111 11122357777775
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 007904 405 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 405 kptvLIG~S~~~g----~Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+|++|=+++... ..+..+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 23778899988766667887544
No 368
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=53.44 E-value=15 Score=33.81 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=54.9
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHh
Q 007904 324 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 401 (585)
Q Consensus 324 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v 401 (585)
...+|+|.|| |-.|..+++.|++ .|- -.++++++++. ++.+.+. ....+.. +-....++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999996 6667777766654 220 14688887741 1000010 0111111 111223577777
Q ss_pred cccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 007904 402 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 402 ~~vkptvLIG~S~~~g~----------------F-------------t~evi~~Ma~~~erPIIFaLS 440 (585)
+. +|++|=+.+.... | +..+++.|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 74 8999977664321 1 467788887665566777543
No 369
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=53.20 E-value=13 Score=40.06 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=28.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 456899999999999999888753 64 588999864
No 370
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=53.12 E-value=12 Score=39.12 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
||.|+|+|..|..+|..|.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 4 368888874
No 371
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=53.11 E-value=14 Score=37.25 Aligned_cols=55 Identities=22% Similarity=0.177 Sum_probs=34.5
Q ss_pred CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 302 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 302 QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
++.....++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 158 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 158 NGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred HHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 343333455566677665544 46789999998777665544432 374 56888876
No 372
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=53.05 E-value=12 Score=39.21 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 3579999999999999987765 263 689999873
No 373
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=53.03 E-value=11 Score=39.62 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4589999999999999887765 364 6899998654
No 374
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=52.96 E-value=6.6 Score=37.98 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=57.5
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 400 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~--~~l~~~k~~fa~-~~~~~~~L~e~ 400 (585)
..+|+|.|| |..|..+++.|++. | ..++..++++. ... ..+......+.. |-....+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877653 4 13677777641 110 001110111111 11122357778
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 007904 401 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 441 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~--------Ft~evi~~Ma~~~erPIIFaLSN 441 (585)
++. +|++|-+++.... .++.+++.|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2557788887766667888 664
No 375
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=52.86 E-value=12 Score=35.66 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=22.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
|++.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 2 l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 5678999999842 333444444444 363 58888764
No 376
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=52.83 E-value=12 Score=35.31 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+-+|+|+|+|.+|+-.|..|.+ .|+ ++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4579999999999999988865 263 68888875
No 377
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=52.79 E-value=45 Score=31.98 Aligned_cols=76 Identities=14% Similarity=0.240 Sum_probs=40.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
+|++.+++|.||+. ||...++..+.+ .| -+++++|++. .+..... .+.-|-....++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~----~~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYD----HIECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSE----EEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceE----EEEecCCCHHHHHHHH
Confidence 36778899999753 444445555544 36 3688888752 1100111 0111111122355555
Q ss_pred ccc-----CCcEEEeccCCC
Q 007904 402 KVI-----KPTILIGSSGVG 416 (585)
Q Consensus 402 ~~v-----kptvLIG~S~~~ 416 (585)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 543 699999776643
No 378
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=52.62 E-value=12 Score=36.38 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=24.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-|+|+|||+||+-.|..+.+ .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999998877654 364 58888864
No 379
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=52.42 E-value=25 Score=34.89 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=56.5
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc---cCCCccCCchh------chhhcc-
Q 007904 321 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHF------KKPWAH- 389 (585)
Q Consensus 321 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi---~~~r~~~l~~~------k~~fa~- 389 (585)
..++..+|+|.|| |-.|..+++.|++. ..| .+++.+|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999986 77777777766541 014 478888874210 00000001111 111111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 390 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 390 ~~~~~~~L~e~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+-....++.++ ...++|++|=+.+.... -|..+++.+.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999977764431 134577777666555 888665
No 380
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=52.41 E-value=14 Score=36.52 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=57.6
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhc----------hhhcc-c
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 390 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k----------~~fa~-~ 390 (585)
++..+|+|.|| |-.|-.+++.|++ .| .+++.+|+.-- ...+.+...+ ..+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFAT---GHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCc---cchhhHHHHhhhcccccCCceEEEECC
Confidence 45678999998 7777777777664 25 36888887421 1001111111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 391 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 391 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
-....++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111234667777 59999988875431 1345677776665566887544
No 381
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=52.29 E-value=11 Score=40.34 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999888753 5 3689999864
No 382
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=52.15 E-value=11 Score=36.19 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+..|..+.+ .|+ ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 263 56777653
No 383
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=52.12 E-value=14 Score=38.43 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
..+|||+|||.||+..|..|.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 3689999999999999998865 364 237999987643
No 384
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=52.10 E-value=11 Score=39.08 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+-.|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888763 74 68888875
No 385
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.09 E-value=15 Score=39.10 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
.+|||+|||.||+..|..|.+. |- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2479999987543
No 386
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=52.02 E-value=14 Score=40.97 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|||+|||.||+..|..|.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988763 6 3699999863
No 387
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=51.94 E-value=12 Score=38.92 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
-+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999877652 5 3689999863
No 388
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=51.93 E-value=24 Score=35.40 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHHhCCCccc--ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 303 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 303 GTaaV~lAgll~A~r~~g~~l~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++-.+.++..+.|+...+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334555556677333333346 89999998 8777777666543 363 478888773
No 389
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=51.90 E-value=14 Score=38.35 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 007904 325 EHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
+--|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988764
No 390
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=51.89 E-value=9.6 Score=40.17 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
.+|||+|||.||...|-.|.+... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998876431 153 6888988643
No 391
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=51.88 E-value=14 Score=39.12 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 257999998743
No 392
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=51.81 E-value=12 Score=39.91 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|||+|||.||+..|-.|.+.+. .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999988876310 253 688999854
No 393
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=51.62 E-value=9.5 Score=35.73 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=25.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999843 444555555554 36 358888874
No 394
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=51.58 E-value=16 Score=35.48 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=39.9
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHH
Q 007904 320 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 398 (585)
Q Consensus 320 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~ 398 (585)
+.++.+++++|.||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. |-....++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 444445555544 363 588887741 110111111111111 111223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 007904 399 DAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 399 e~v~~v-----kptvLIG~S~~~ 416 (585)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 555544 789999776643
No 395
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=51.56 E-value=28 Score=33.60 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=48.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
+.+|+|.|| |-.|-.+++.|++ .| .+++.+|+. +.. + . .+.-+-....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 7777777777654 25 367877753 101 0 1 111122223567788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 404 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 404 vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
+++|++|=+.+.... -+..+++.+.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987765321 03456777765543 6777544
No 396
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.55 E-value=12 Score=39.15 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 45799999999999999888652 63 689999874
No 397
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=51.46 E-value=13 Score=40.08 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
..+|||+|||.||.-.|-.|.+... .| -+|.++|+...
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 14 36899998643
No 398
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=51.45 E-value=17 Score=37.63 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
..+|||+|||.||+..|..|.+. |- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988653 21 147888888653
No 399
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.31 E-value=10 Score=39.56 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988864 25 469999986
No 400
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=51.24 E-value=13 Score=39.79 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=27.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 375 46677764
No 401
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=51.19 E-value=12 Score=39.60 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+-.|+|+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998875 375 588999864
No 402
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=51.12 E-value=10 Score=37.23 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
...+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999988652 64 57788864
No 403
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.03 E-value=16 Score=38.83 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 367 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD 367 (585)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 16 3689999
No 404
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=50.91 E-value=47 Score=31.82 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=52.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 404 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 404 (585)
||+|.|| |-.|..+++.|++ .| .+++.+|+..- ....... ....+.. +-.... +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLSS---GRREFVN-PSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCSS---CCGGGSC-TTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCCC---CchhhcC-CCceEEECccccHH-HHhhcCC-
Confidence 7999998 8788777777765 25 36888876421 1101011 1111111 111122 5555543
Q ss_pred CCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007904 405 KPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 405 kptvLIG~S~~~g~F----------------t~evi~~Ma~~~erPIIFaLS 440 (585)
|++|=+.+....- |..+++.+.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 9999877754211 245777777766678888655
No 405
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=50.82 E-value=12 Score=38.93 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999987765 263 68999986
No 406
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=50.81 E-value=11 Score=38.89 Aligned_cols=104 Identities=10% Similarity=0.077 Sum_probs=46.8
Q ss_pred HHHHHHhCCCccc-ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc
Q 007904 313 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 391 (585)
Q Consensus 313 l~A~r~~g~~l~d-~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~ 391 (585)
|+.-.+....+++ .||-|+|+|..|-.-++.+.+.-.....+ .+-.+=+-++|++ . +......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~---~~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----Q---AMAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----H---HHHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----H---HHHHHHHHHcCC-C
Confidence 3333444455554 69999999988765555554421110001 0011223456652 1 112222222211 1
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHH-HHHH
Q 007904 392 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVI-EAMA 428 (585)
Q Consensus 392 ~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi-~~Ma 428 (585)
.-..++.|.++.-++|+++ ++++.. +..+++ ++|.
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~~-~H~~~~~~al~ 118 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPNH-LHYTMAMAAIA 118 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCGG-GHHHHHHHHHH
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCcH-HHHHHHHHHHH
Confidence 1236899999988899887 666553 444444 4443
No 407
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=50.56 E-value=9 Score=40.93 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 007904 327 RFLFLGAGEAGTGIAELIALEI 348 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~ 348 (585)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 408
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.47 E-value=11 Score=39.08 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999988765 26 368999986
No 409
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=50.27 E-value=7.7 Score=41.66 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876632 12 369999985
No 410
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=50.23 E-value=9.4 Score=38.48 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=30.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999998764 5 468888864
No 411
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=50.20 E-value=12 Score=37.90 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|||+|||.||+..|..+.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988754 364 2357888764
No 412
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=50.13 E-value=11 Score=40.99 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|||+|||.||+..|..|.+ +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1364 689999864
No 413
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=50.11 E-value=29 Score=33.76 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=56.6
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCc----hhchhhcc-ccCCCCC
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ----HFKKPWAH-EHEPVNN 396 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~----~~k~~fa~-~~~~~~~ 396 (585)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+. .....+.. +-....+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 77 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACS 77 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHH
Confidence 34678999987 6677667666654 25 36888887421 00000010 00111111 1112235
Q ss_pred HHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007904 397 LLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 440 (585)
Q Consensus 397 L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~-erPIIFaLS 440 (585)
+.++++.+++|++|=+.+.... -+..+++.+.+.. .+.+||.=|
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7788888889999988775431 1235677776655 367887544
No 414
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=50.07 E-value=50 Score=31.30 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=41.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
..+++.+++|.||++ ||...++..+.+ .| -+++++|++. ...+.+. +..+.-|- ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 458889999999853 333444444444 36 3588888753 0000010 01111111 2356666
Q ss_pred hccc-CCcEEEeccCCC
Q 007904 401 VKVI-KPTILIGSSGVG 416 (585)
Q Consensus 401 v~~v-kptvLIG~S~~~ 416 (585)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6655 799999777643
No 415
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=50.07 E-value=12 Score=39.49 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCCchHHHHHHHHHHHHHH---hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 300 DIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 300 DiQGTaaV~lAgll~A~r~---~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
..||-|+++.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 8 ~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 8 HHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -----------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 3456666655443332211 111222358999999999999999886531 13 479999987543
No 416
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=49.89 E-value=15 Score=37.13 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=24.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|+|+|||.||+..|-.|.+. .-|+ ++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECC
Confidence 699999999999999888653 0143 57777765
No 417
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=49.86 E-value=18 Score=38.91 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=30.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
...+|||+|||.||+..|..|.+. ..| .++.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCCc
Confidence 357999999999999999988764 013 479999987543
No 418
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=49.78 E-value=9.9 Score=37.55 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.+|+..|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 025 368888876
No 419
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.71 E-value=15 Score=38.53 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+-.|+|+|||.||+..|..+.+ .|+ ++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 3579999999999999988865 363 6899996553
No 420
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=49.63 E-value=42 Score=33.84 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=24.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++|+|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 7999999998777766665543 26 2 68888764
No 421
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.60 E-value=38 Score=33.59 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 309 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 309 lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
....+.+++..+.+ ..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 33456677777654 467999999998885444444322 23 57888876
No 422
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.56 E-value=13 Score=38.84 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 369999984
No 423
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.44 E-value=13 Score=39.54 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999888652 5 4699999864
No 424
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=49.36 E-value=34 Score=34.56 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.2
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 313 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 313 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
+.++......-..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344323333356899999999777766655443 264 57888875
No 425
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=49.33 E-value=12 Score=37.65 Aligned_cols=148 Identities=14% Similarity=0.076 Sum_probs=82.5
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007904 325 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 403 (585)
Q Consensus 325 d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 403 (585)
+.||+++|+ |.-|--+++.+.+. |. +-++.++.+.- +. + . ...+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-----g~------~~v~~VnP~~~---g~-~-i--------~G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-----GT------KIVAGVTPGKG---GM-E-V--------LGVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-E--------TTEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-----CC------eEEEEECCCCC---Cc-e-E--------CCEEeeCCHHHHhhc
Confidence 578999999 88877776655442 64 35667777531 10 0 0 011123678898885
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCC-cEEEecCCCCCcCCCCHHHHhcc--ccCcEEEecCCCCCcceeCCeeeC
Q 007904 404 IKPTILIGSSGVGRTFTKEVIEAMASFNEK-PLILALSNPTSQSECTAEEAYTW--SKGRAIFASGSPFDPFEYNGKVFV 480 (585)
Q Consensus 404 vkptvLIG~S~~~g~Ft~evi~~Ma~~~er-PIIFaLSNPt~~~E~tpeda~~w--t~Grai~AsGSPf~pv~~~G~~~~ 480 (585)
.+||+.| +..++ .+..+++++..+..-+ -|||+-- -+|..-+++.+. ..|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G----~~~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFVPA-PAAADAALEAAHAGIPLIVLITEG----IPTLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECCCH-HHHHHHHHHHHHTTCSEEEECCSC----CCHHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEEEECCC----CCHHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 5799988 44433 5788999988876655 3455421 122112233332 235556665554 3455
Q ss_pred cCCCcccccchhh----hHHHHHhCCcccCHHHHH
Q 007904 481 PGQANNAYIFPGF----GLGLVISGAIRVHDDMLL 511 (585)
Q Consensus 481 p~Q~NN~yiFPGi----glG~l~~~a~~Itd~m~~ 511 (585)
|+++.|.. ||+. |-=++.||+-.++-+++.
T Consensus 129 ~~~~~~~~-~~~~~~~~G~va~vsqSG~l~~~~~~ 162 (288)
T 1oi7_A 129 AEETKIGI-MPGHVFKRGRVGIISRSGTLTYEAAA 162 (288)
T ss_dssp TTTEEEES-SCGGGCCEEEEEEEESCHHHHHHHHH
T ss_pred CCCceeEE-cccCCCCCCCEEEEECCHHHHHHHHH
Confidence 77777765 3332 212344555444444443
No 426
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=49.28 E-value=28 Score=34.33 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=58.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch-----hchhhcc-ccCCCC
Q 007904 323 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 395 (585)
Q Consensus 323 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~-----~k~~fa~-~~~~~~ 395 (585)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .....+.. .+..+.. +-....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45578999996 7777777777764 25 3688888742 11111110 0111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007904 396 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 440 (585)
Q Consensus 396 ~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~-erPIIFaLS 440 (585)
++.++++.+++|++|=+.+.+.. -|..+++.+.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988875321 0234566665544 467888655
No 427
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=49.24 E-value=34 Score=34.61 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=24.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 356899999999877766655443 264 57888875
No 428
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=49.23 E-value=13 Score=35.29 Aligned_cols=77 Identities=26% Similarity=0.367 Sum_probs=42.6
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-------cccC
Q 007904 321 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 392 (585)
Q Consensus 321 ~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-------~~~~ 392 (585)
.++++.+++|.||++ .|..+|+.|+ + .| -+++++|++- +.+......+. -|-.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFA----K-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHH----H-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 2444444444 3 36 3688888741 11222111111 1111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCC
Q 007904 393 PVNNLLDAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 393 ~~~~L~e~v~~v-----kptvLIG~S~~~ 416 (585)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223455666655 799999777653
No 429
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=49.21 E-value=1.3e+02 Score=31.55 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=79.3
Q ss_pred CchHHHHHHHHcCCCeeec--cCCCchHHHHHHHHHHHHHHhCCC-cccce--EEEeCc----chHHHHHHHHHHHHHHh
Q 007904 280 NHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LAEHR--FLFLGA----GEAGTGIAELIALEISK 350 (585)
Q Consensus 280 ~~~af~lL~ryr~~~~~Fn--DDiQGTaaV~lAgll~A~r~~g~~-l~d~r--iv~~GA----GsAg~GIA~ll~~~~~~ 350 (585)
...+.+.|.+|- ++||.| ||. --+=+||=++.-.+..|++ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 456666777774 699999 777 6667888888888888865 99999 889998 6 3567777777766
Q ss_pred hcCCChhhhcCeEEEEcCC-CcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEeccC
Q 007904 351 QTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 414 (585)
Q Consensus 351 ~~Gls~eeA~~~i~lvD~~-GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~e~v~~vkptvLIG~S~ 414 (585)
.|+ +|.++-.+ |+.-+. .+...-+.+|+.. ....++.|+|+. .||+.-..=
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred -cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 475 68888888 774321 1111112233221 123689999998 999987653
No 430
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=49.17 E-value=27 Score=33.24 Aligned_cols=79 Identities=15% Similarity=0.269 Sum_probs=40.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCch-hchhhcc-ccCCCCCHHH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLLD 399 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~-~k~~fa~-~~~~~~~L~e 399 (585)
++++.+++|.||+. ||...++..+.+ .| -+++++|++- .+ +.+.. ....+.. |-....++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EG-------ALVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778899999853 444445555444 36 3688888752 11 10100 0001111 2112224555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007904 400 AVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 400 ~v~~v-----kptvLIG~S~~~ 416 (585)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 799999776643
No 431
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=49.14 E-value=55 Score=30.92 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=40.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 401 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 401 (585)
++++.+++|.||+. ||...++..+.+ .| -+++++|++--+ .... -..+.-|-....++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 46778999999743 344445555444 36 368888875211 0010 001111211223455555
Q ss_pred ccc-----CCcEEEeccCC
Q 007904 402 KVI-----KPTILIGSSGV 415 (585)
Q Consensus 402 ~~v-----kptvLIG~S~~ 415 (585)
+.+ ++|+||=..+.
T Consensus 66 ~~~~~~~g~id~lv~~Ag~ 84 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGI 84 (250)
T ss_dssp HHHHHHCSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 544 79999977664
No 432
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=49.08 E-value=41 Score=32.63 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=43.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcc----------c
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------E 390 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~----------~ 390 (585)
.+|++.+++|.||++ ||..-++..+.+ .| -+++++|++ . +.+......+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 357889999999854 444445555544 36 368888874 1 113222222211 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007904 391 HEPVNNLLDAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 391 ~~~~~~L~e~v~~v-----kptvLIG~S~~~ 416 (585)
-....++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11112455666655 799999776644
No 433
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=49.03 E-value=16 Score=38.22 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
-...+|+|+|||.||+..|..|.++ | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999988763 6 368888876
No 434
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=49.00 E-value=14 Score=38.98 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=61.0
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEc--CC-------CcccCCCccCCchhchhhccccCCC
Q 007904 325 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SK-------GLIVSSRKDSLQHFKKPWAHEHEPV 394 (585)
Q Consensus 325 d~riv~~G-AGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD--~~-------GLi~~~r~~~l~~~k~~fa~~~~~~ 394 (585)
..||.|+| ||..|..+|-+|+.. ++-.+ ...+.|+| .. |..- | |.+-..+|.+...-.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~e--~~~l~L~d~d~~~~~~~~~G~am----D-L~h~~~p~~~~v~i~ 99 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFGQ--DQPIALKLLGSERSFQALEGVAM----E-LEDSLYPLLREVSIG 99 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTCT--TCCEEEEEECCGGGHHHHHHHHH----H-HHTTTCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCCC--CceeEEEecCccchhhhhHHHHH----h-HHhhhhhhcCCcEEe
Confidence 36999999 699999988877652 54111 11255544 32 1111 1 322222343321112
Q ss_pred CCHHHHhcccCCcEEEeccCC---CCC-----------CCHHHHHHHHcC-CCCcEEEecCCCC
Q 007904 395 NNLLDAVKVIKPTILIGSSGV---GRT-----------FTKEVIEAMASF-NEKPLILALSNPT 443 (585)
Q Consensus 395 ~~L~e~v~~vkptvLIG~S~~---~g~-----------Ft~evi~~Ma~~-~erPIIFaLSNPt 443 (585)
.+..+++++ .|++|=+.+. +|- .=+++++.+.++ +..-||+-.|||.
T Consensus 100 ~~~y~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 100 IDPYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp SCHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cCCHHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 356788887 8887744443 331 123455667776 7889999999997
No 435
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.00 E-value=12 Score=35.93 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999988866654 364 57788874
No 436
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=48.82 E-value=15 Score=38.55 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+..|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 45899999999999999888653 6 368999984
No 437
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=48.76 E-value=15 Score=39.11 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=28.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 35689999999999999988865 364 6888988643
No 438
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=48.74 E-value=14 Score=39.36 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=27.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.-.+..|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA-----GV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 34567899999999999999888763 75 36666654
No 439
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=48.74 E-value=26 Score=33.50 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=25.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|++.+++|.||++ ||...++..+.++ | -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-G-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-T-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-C-------CEEEEEeCC
Confidence 457889999999864 4444444544443 6 358888874
No 440
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=48.66 E-value=28 Score=32.70 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=37.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhccc--
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI-- 404 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v-- 404 (585)
+++|.||+. ||...++..+.+ .| -+++++|++- . .+.. .+.-|-....++.++++.+
T Consensus 3 ~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~~ 61 (257)
T 1fjh_A 3 IIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp EEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCTT
T ss_pred EEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhCC
Confidence 688888743 444445555544 36 3588888741 1 1211 1111111123466667665
Q ss_pred CCcEEEeccCCC
Q 007904 405 KPTILIGSSGVG 416 (585)
Q Consensus 405 kptvLIG~S~~~ 416 (585)
++|+||=..+..
T Consensus 62 ~id~lv~~Ag~~ 73 (257)
T 1fjh_A 62 GMDGLVLCAGLG 73 (257)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999877654
No 441
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=48.48 E-value=22 Score=34.05 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=24.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 40 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDIL 40 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999753 444445554444 36 368888774
No 442
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=48.48 E-value=35 Score=32.68 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=23.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++++.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 36778999998743 444445554444 363 58888774
No 443
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=48.47 E-value=16 Score=38.22 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..+.+. |+ ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----GF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 35799999999999999888652 63 699999854
No 444
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=48.33 E-value=40 Score=33.60 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=51.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 327 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 327 riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
||+|.|| |-.|-.+++.|++. |- -+++.+|+. ....+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888777653 52 257777664 011346667765
Q ss_pred CcEEEeccCCCC------------CCCHHHHHHHHcCCCC-cEEEecC
Q 007904 406 PTILIGSSGVGR------------TFTKEVIEAMASFNEK-PLILALS 440 (585)
Q Consensus 406 ptvLIG~S~~~g------------~Ft~evi~~Ma~~~er-PIIFaLS 440 (585)
+|++|=+.+..+ ..+..+++.+.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 899986665432 1246788888766555 6777544
No 445
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=48.13 E-value=13 Score=39.48 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4689999999999999988865 375 588888763
No 446
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=48.00 E-value=15 Score=38.74 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999998764 20 125799999864
No 447
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=47.90 E-value=32 Score=35.09 Aligned_cols=49 Identities=20% Similarity=0.145 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.++..+.|++..+ --..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~~~-~~~g~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTAG-VGPGSTVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 3445566676433 3356899999999877666554432 364 57888876
No 448
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=47.84 E-value=17 Score=37.74 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
.+|||+|||.||+..|..|.+. ..| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 4899999999999999988763 013 47999998653
No 449
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=47.68 E-value=40 Score=32.26 Aligned_cols=76 Identities=21% Similarity=0.297 Sum_probs=38.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 400 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 400 (585)
.++.+.+++|.||+. ||...++..+.+ .| .+++++|++. +.+... ..+.-|-....++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 346678899999853 444445555554 36 3688888742 112210 0111121122234445
Q ss_pred hccc-----CCcEEEeccCC
Q 007904 401 VKVI-----KPTILIGSSGV 415 (585)
Q Consensus 401 v~~v-----kptvLIG~S~~ 415 (585)
++.+ ++|+||=..+.
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~ 97 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGV 97 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 5443 58999976664
No 450
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=47.65 E-value=16 Score=38.59 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 35799999999999999988763 53 567776653
No 451
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=47.60 E-value=17 Score=37.09 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 58999999999999998886520 05 3689999863
No 452
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=47.59 E-value=36 Score=34.38 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.++..+.|+.....--..++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 344444555322333356899999999777666655433 263 46888875
No 453
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=47.42 E-value=23 Score=34.74 Aligned_cols=80 Identities=10% Similarity=0.161 Sum_probs=44.1
Q ss_pred CCcccceEEEeCcch---HHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh-----hc-ccc
Q 007904 321 GTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-----WA-HEH 391 (585)
Q Consensus 321 ~~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~-----fa-~~~ 391 (585)
..|++.++||.||++ .|..||+.|++ .| -+++++|++. ...+.+...... +. -|-
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 89 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCDV 89 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECCT
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcCC
Confidence 458889999999963 44446666654 36 3588888751 110111111111 10 111
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 007904 392 EPVNNLLDAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 392 ~~~~~L~e~v~~v-----kptvLIG~S~~~ 416 (585)
....++.++++.+ +.|+||=..+..
T Consensus 90 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 90 SDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 1223455566555 799999777654
No 454
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=47.34 E-value=66 Score=32.11 Aligned_cols=42 Identities=19% Similarity=0.187 Sum_probs=27.0
Q ss_pred HHHHHhCCCcccceEEEe-CcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 314 AALKLIGGTLAEHRFLFL-GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 314 ~A~r~~g~~l~d~riv~~-GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
++++..+ ...++++||. |+|..|...+.++... |. +++.+|+
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~-----Ga-------~Vi~~~~ 197 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE-----GF-------RPIVTVR 197 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 5666655 4445777776 7787777666555432 62 5887775
No 455
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.31 E-value=17 Score=37.93 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+-.|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35699999999999999888763 6 368899986
No 456
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=47.10 E-value=17 Score=37.40 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988864 25 4788888853
No 457
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=47.02 E-value=1.3e+02 Score=30.75 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=83.9
Q ss_pred HHHhcCCceeeeeecCCCchHHHHHHHHcCCCeeeccCC-CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHH
Q 007904 263 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDI-QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 341 (585)
Q Consensus 263 v~~~fGp~~lIq~EDf~~~~af~lL~ryr~~~~~FnDDi-QGTaaV~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA 341 (585)
+-.+| .++ |-+--++ ..+.+.|.+|- ++||.|-.- .---+=+||=++.-.+..| +|++.||+++|-| --+|
T Consensus 97 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~---~rva 168 (315)
T 1pvv_A 97 VLSRY-VDA-IMARVYD-HKDVEDLAKYA-TVPVINGLSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG---NNVA 168 (315)
T ss_dssp HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC---CHHH
T ss_pred HHHHh-CcE-EEEecCc-hHHHHHHHHhC-CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC---cchH
Confidence 44567 454 3344443 55566666764 589998311 3445667888887777665 7999999999998 2577
Q ss_pred HHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEecc
Q 007904 342 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSS 413 (585)
Q Consensus 342 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~----~~~~~L~e~v~~vkptvLIG~S 413 (585)
+-++.++.+ .|+ +|.++-.+|+.-.. + +-..-+.+|+.. ....++.|+|+. .||+.-..
T Consensus 169 ~Sl~~~~~~-~g~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy~~~ 231 (315)
T 1pvv_A 169 HSLMIAGTK-LGA-------DVVVATPEGYEPDE--K-VIKWAEQNAAESGGSFELLHDPVKAVKD--ADVIYTDV 231 (315)
T ss_dssp HHHHHHHHH-TTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHTTT--CSEEEECC
T ss_pred HHHHHHHHH-CCC-------EEEEECCccccCCH--H-HHHHHHHHHHHcCCeEEEEeCHHHHhCC--CCEEEEcc
Confidence 888887776 475 69999888874421 1 111112233221 123689999998 99998644
No 458
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=46.96 E-value=13 Score=39.58 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=27.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999887754 364 688898875
No 459
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.87 E-value=12 Score=38.11 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcc
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 372 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 372 (585)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4689999999999999888843 13 79999986543
No 460
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=46.83 E-value=19 Score=34.24 Aligned_cols=37 Identities=24% Similarity=0.432 Sum_probs=23.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++++.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AGA-------TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 46788999999753 444445555544 363 68888774
No 461
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=46.74 E-value=35 Score=32.43 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=24.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..|++++++|.||++ ||..-++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 457889999999853 333444444444 36 368888874
No 462
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=46.51 E-value=60 Score=31.22 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=25.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+++++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 3 TLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 57889999999863 444455555554 36 368999885
No 463
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=46.41 E-value=17 Score=38.34 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHH
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
....+|+|+|||.||+..|..|.++
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998763
No 464
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=46.40 E-value=17 Score=37.83 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888763 63 56777765
No 465
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=46.32 E-value=3.1 Score=40.82 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=16.6
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIAL 346 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~ 346 (585)
.||.|+|+|..|.++|..+..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-
T ss_pred ceEEEEeCCHHHHHHHHHHHH
Confidence 379999999999988877654
No 466
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=46.23 E-value=17 Score=35.35 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=24.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.--++|+|||.||+-.|-.+.+ .|+ ++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3458999999999887755433 364 68889874
No 467
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=46.20 E-value=14 Score=36.31 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=56.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCc-cCCchhch----------hhcc-ccC
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK-DSLQHFKK----------PWAH-EHE 392 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~-~~l~~~k~----------~fa~-~~~ 392 (585)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.-- ..|. ........ .+.. +..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7777777777764 26 35888876421 0010 00111100 1111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007904 393 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 393 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~erPIIFaLS 440 (585)
...++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12346677776679999988775421 1445777887766567888544
No 468
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=46.17 E-value=31 Score=34.20 Aligned_cols=50 Identities=12% Similarity=-0.073 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++..+.+++..+.--.+++++|.|| |..|..+++++.. .| -+++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 44445556654444445789999996 8888877776654 36 258888764
No 469
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.02 E-value=18 Score=38.02 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4589999999999999977765 363 599999853
No 470
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=46.00 E-value=25 Score=36.28 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|+|+|||-+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998764 51 14688888753
No 471
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=45.98 E-value=18 Score=37.10 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
.+.+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999888753 63 477777753
No 472
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=45.94 E-value=13 Score=35.40 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=41.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhc-------cccCCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEPV 394 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa-------~~~~~~ 394 (585)
++++++++|.||++ ||...++..+.+ .|. +++++|++- +.+......+. -|-...
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57788999999854 344444444444 363 588887641 11211111111 111112
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007904 395 NNLLDAVKVI-----KPTILIGSSGVG 416 (585)
Q Consensus 395 ~~L~e~v~~v-----kptvLIG~S~~~ 416 (585)
.++.++++.+ +.|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2455555544 799999777654
No 473
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=45.93 E-value=44 Score=32.01 Aligned_cols=38 Identities=37% Similarity=0.519 Sum_probs=24.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 457889999999753 444445555544 36 358888874
No 474
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=45.92 E-value=22 Score=35.61 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=51.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 405 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 405 (585)
.||.|+|+|..|...+..+.. +..|. +-+.++|++ . +......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 589999999988766655542 11121 223466653 1 1122222222100112478999999878
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007904 406 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 437 (585)
Q Consensus 406 ptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIF 437 (585)
+|+++ +++++ ....+++....+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 99888 44444 45666666555433 55554
No 475
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=45.77 E-value=14 Score=38.36 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=18.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 007904 326 HRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~ 347 (585)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887653
No 476
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.70 E-value=18 Score=40.69 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
...+|||+|||.||+..|..|.+ .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 34689999999999999998865 26 3599999863
No 477
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=45.68 E-value=15 Score=39.12 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHh-------hcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~-------~~Gls~eeA~~~i~lvD~~G 370 (585)
..+|||+|||.||.-.|-.|.+.+.. ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999988774310 0253 688898864
No 478
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=45.67 E-value=24 Score=33.52 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=26.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
||.|+|+|..|..+|..|.+. |. .+++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988764 52 468888874
No 479
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=45.64 E-value=19 Score=38.07 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHh-hcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIAL-EISK-QTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~-~~~~-~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.||+..|..|.+ .... ..| .++.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999976 4210 002 468899986
No 480
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=45.62 E-value=23 Score=34.51 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=21.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.++++.+++|.||++ ||..-++..+.+ .| -+++++|++
T Consensus 29 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 66 (281)
T 4dry_A 29 GSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRR 66 (281)
T ss_dssp -----CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 467889999999853 344444444444 36 368888874
No 481
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=45.59 E-value=15 Score=38.35 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=27.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 356899999999999999888653 6 368899965
No 482
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=45.56 E-value=39 Score=33.63 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=55.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchh----------chhhcc-ccCC
Q 007904 326 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----------KKPWAH-EHEP 393 (585)
Q Consensus 326 ~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~----------k~~fa~-~~~~ 393 (585)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ..+.+... ...+.. |-..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 47999996 7777777776654 25 3688888752100 00112111 111111 1111
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCC---CcEEEecC
Q 007904 394 VNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE---KPLILALS 440 (585)
Q Consensus 394 ~~~L~e~v~~vkptvLIG~S~~~g~----------------Ft~evi~~Ma~~~e---rPIIFaLS 440 (585)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357778888889999988775421 12345666665543 57887544
No 483
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=45.48 E-value=36 Score=34.46 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=24.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 356899999999777665554432 364 57888875
No 484
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=45.48 E-value=18 Score=37.52 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987641 13 5799999875
No 485
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=45.45 E-value=14 Score=36.98 Aligned_cols=101 Identities=19% Similarity=0.220 Sum_probs=59.5
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchh-------hcc-cc
Q 007904 321 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAH-EH 391 (585)
Q Consensus 321 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~-------fa~-~~ 391 (585)
..+++.+|+|.|| |..|..+++.|++. .|. .++++++++-- .+...+.. +.. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECCC
Confidence 4477889999996 88888888877652 142 47888877411 01111111 111 11
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCC----C------------CHHHHHHHHcCCCCcEEEecC
Q 007904 392 EPVNNLLDAVKVIKPTILIGSSGVGRT----F------------TKEVIEAMASFNEKPLILALS 440 (585)
Q Consensus 392 ~~~~~L~e~v~~vkptvLIG~S~~~g~----F------------t~evi~~Ma~~~erPIIFaLS 440 (585)
....++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 11234667776 49999988876531 0 235666666665567887654
No 486
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=45.40 E-value=72 Score=30.88 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=24.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+|++++++|.||++ ||..-++..+.+ .| -+++++|++
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 66 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AG-------AHVILHGVK 66 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 47788999999853 344445555544 36 368888874
No 487
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=45.25 E-value=17 Score=37.51 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 326 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 326 ~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|+|+|||.+|+..|-.|.+ .|.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCC
Confidence 589999999999999998865 3631 268888874
No 488
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=45.25 E-value=16 Score=36.48 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=51.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCccCCchhchhhccc--c-CCCCCHHHH
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--H-EPVNNLLDA 400 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~~l~~~k~~fa~~--~-~~~~~L~e~ 400 (585)
+..||.|+|+|..|...++.|.. ..++ +-+.++|++ . + ..+.++.. . ....++.|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~----~~~~~~~~~~~~~~~~~~~~l 62 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRE----SAQA------EVRGIASRR----L---E----NAQKMAKELAIPVAYGSYEEL 62 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHH----SSSE------EEEEEBCSS----S---H----HHHHHHHHTTCCCCBSSHHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHh----CCCc------EEEEEEeCC----H---H----HHHHHHHHcCCCceeCCHHHH
Confidence 34799999999988776655533 1121 223356653 1 1 11233322 1 234789999
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007904 401 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 437 (585)
Q Consensus 401 v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~erPIIF 437 (585)
++.-++|+++ +++++. ...++++...+. .++|+.
T Consensus 63 l~~~~~D~V~-i~tp~~-~h~~~~~~al~~-gk~vl~ 96 (330)
T 3e9m_A 63 CKDETIDIIY-IPTYNQ-GHYSAAKLALSQ-GKPVLL 96 (330)
T ss_dssp HHCTTCSEEE-ECCCGG-GHHHHHHHHHHT-TCCEEE
T ss_pred hcCCCCCEEE-EcCCCH-HHHHHHHHHHHC-CCeEEE
Confidence 9877799888 555443 555555544433 355554
No 489
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=45.25 E-value=25 Score=35.29 Aligned_cols=48 Identities=21% Similarity=0.093 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 308 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 308 ~lAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
.++..+.|++..+.+ ..++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 444455666655443 46899999998776655554432 363 3787775
No 490
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=45.21 E-value=17 Score=39.56 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
+..|+|+|+|.+|+++|-.+.+ .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4579999999999999998865 374 588998764
No 491
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.15 E-value=20 Score=34.14 Aligned_cols=38 Identities=26% Similarity=0.370 Sum_probs=24.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 321 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 321 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
.+|++++++|.||++ ||...++..+.+ +| -+++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DG-------ATVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357889999999853 333444444444 36 368888764
No 492
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=45.09 E-value=20 Score=38.18 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=23.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHH
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALE 347 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~ 347 (585)
++++++|||+|+|..|..-+++|+++
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhC
Confidence 57889999999999999999999874
No 493
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=45.08 E-value=18 Score=35.67 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhh-cCeEEEEcCCC
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEET-RKKICLVDSKG 370 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA-~~~i~lvD~~G 370 (585)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECCC
Confidence 689999999999999888663 3110 0 14789999873
No 494
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=45.00 E-value=15 Score=39.99 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4579999999999999988765 375 58889886
No 495
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=45.00 E-value=13 Score=36.56 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCC
Q 007904 324 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 370 (585)
Q Consensus 324 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 370 (585)
....|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 3578999999999999998875 1 5 3688999874
No 496
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=44.78 E-value=19 Score=37.30 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCc
Q 007904 327 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 371 (585)
Q Consensus 327 riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 371 (585)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887631 13 57999998653
No 497
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=44.74 E-value=27 Score=36.22 Aligned_cols=115 Identities=18% Similarity=0.170 Sum_probs=63.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCCCcccCCCc--cCCchhchhhccccCCCCCHH
Q 007904 322 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAHEHEPVNNLL 398 (585)
Q Consensus 322 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~--~~l~~~k~~fa~~~~~~~~L~ 398 (585)
..+-.||.|+|| |..|--+|-+|... .=++..+. -.+.|+|...-+..-.+ -+|.+---+.........+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~----~l~~~~~~-~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARG----ALLGPTTP-VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHT----TTTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhc----cccCCCCc-cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 355679999997 98888888777652 11111111 26889996311100000 012211111111111124688
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007904 399 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFN-EKPLILALSNPT 443 (585)
Q Consensus 399 e~v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~-erPIIFaLSNPt 443 (585)
+++++ .|++|=+.+.+ |- .=+++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 88887 89988555443 31 1134556677765 566888999997
No 498
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=44.73 E-value=35 Score=31.66 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=24.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 322 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 322 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
++++.+++|.||+. ||...++..+.+ .| .+++++|++
T Consensus 4 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 4 KLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 444445555544 36 368888774
No 499
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=44.68 E-value=37 Score=34.30 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=24.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcC
Q 007904 323 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 368 (585)
Q Consensus 323 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 368 (585)
-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 356899999998777665554432 364 57888875
No 500
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=44.67 E-value=24 Score=36.79 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCeEEEEcCC
Q 007904 325 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 369 (585)
Q Consensus 325 d~riv~~GAGsAg~GIA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 369 (585)
..+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 46899999999999999988764 6 356777665
Done!