STRING 9.05 
  TIR1 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
TIR1
TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase; Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor prote [...] (594 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AXR3
AXR3 (AUXIN RESISTANT 3); transcription factor; Transcription regulator acting as repressor of [...] (229 aa)
      0.999
IAA7
IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor; Transcription regulator acting as represso [...] (243 aa)
      0.999
SKP1
SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase; SKP1 is [...] (160 aa)
      0.999
SHY2
SHY2 (SHORT HYPOCOTYL 2); transcription factor; SHY2/IAA3 regulates multiple auxin responses in [...] (189 aa)
      0.999
ATCUL1
ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding; Encodes a cullin that is a component o [...] (738 aa)
      0.998
IAA9
IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor; auxin (indole-3-acetic acid) ind [...] (338 aa)
      0.997
ASK2
ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein binding / ubiquitin-protein ligase; Similar to SKP1 in [...] (171 aa)
       0.981
RBX1
RBX1 (RING-BOX 1); protein binding; Encodes a ring-box 1 like protein and component of the SCF [...] (142 aa)
     0.963
ATSK11
ATSK11; protein kinase/ protein serine/threonine kinase; encodes a SHAGGY-related kinase involv [...] (405 aa)
       0.961
ASK19
ASK19 (ARABIDOPSIS SKP1-LIKE 19); protein binding / ubiquitin-protein ligase; ARABIDOPSIS SKP1- [...] (200 aa)
       0.961
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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