BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007921
(585 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IQV7|SCY2_ARATH Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis
thaliana GN=SCY2 PE=2 SV=1
Length = 575
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/551 (72%), Positives = 471/551 (85%), Gaps = 11/551 (1%)
Query: 38 LCTKTFVSVRLSLLDSKRRQ---VPLLNRPFLSRANKRYSVYSSDQLRSDYVNVEASSAL 94
LC++ + +L S+ RQ + + R L + K +S+ SD+ R D ++ E
Sbjct: 33 LCSQPRKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTD 92
Query: 95 SVNLEAVPPRLDDEVDSQGLRDVTDNETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKS 154
++++E +PP D +SQ N +PK ++NRFL+F+R+SSVLN AAE FFKS
Sbjct: 93 ALDVEIIPPDSQDIRNSQN--SAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKS 150
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQ 214
EIRRRLFVTAVL+V+SR+GYFIPLPGFDRRLIPQDYLSFVSGSV+ELG+FGAE+KLS FQ
Sbjct: 151 EIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQ 210
Query: 215 LGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIVACYS 274
LG+SPQI+ASI+MQVLCH++PSLV+LRKEGLDGHEKIKSYIWW+S FAI+EA++VA S
Sbjct: 211 LGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTS 270
Query: 275 LPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTET 334
L YS++AA+ VKHVM+T+ LLVCGAMTM+W+CDTISESGFG GSSLIICVGILTGYTET
Sbjct: 271 LQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTET 330
Query: 335 LYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLAS 394
L+KML+Q+ +GS W P++LGLLG+FT+VTM+AVVVTEGCRK+KLQYYGFKLAS
Sbjct: 331 LHKMLNQI------SGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLAS 384
Query: 395 AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPET 454
A+RE SPITEVEPYIPFNINP+GMQPVLTTTYLLAFPSILASILGSPF ++KEILNPE+
Sbjct: 385 ASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPES 444
Query: 455 SVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQ 514
+VGA PWVYY+IYAFFVFLFNIFDIANLPKEIADYLNKMGARIPN+KPGKATIEYLTKIQ
Sbjct: 445 TVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQ 504
Query: 515 ASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSYQAYNVMP 574
ASTRFWGGLLLS LAT+ST+LDHYLR IN+GFSIGFTSVLIIVGSIIELRRSY AYNVMP
Sbjct: 505 ASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMP 564
Query: 575 SLSKALRRYGV 585
SLSKAL+RYGV
Sbjct: 565 SLSKALKRYGV 575
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 224/441 (50%), Gaps = 39/441 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV 375
G G+SL+I + I+ TL + L Q L + S +L ++ + TIV + V
Sbjct: 186 GNGASLLIFLNIVA----TLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGI--VF 239
Query: 376 VTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 433
V EG R++ + SA R+ + +E Y+P +N G+ P++ + +L P
Sbjct: 240 VQEGTRRI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFS 292
Query: 434 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYL 490
LA+ + + L+P G PW+Y Y + F+ F I N P ++A L
Sbjct: 293 LANFTSNEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNL 348
Query: 491 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIG 549
KMG+ IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G
Sbjct: 349 KKMGSSIPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--G 406
Query: 550 FTSVLIIVGSIIELRRSYQAY 570
TS+LI+VG I+ + Q Y
Sbjct: 407 ATSLLILVGVAIDTAKQVQTY 427
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 224/441 (50%), Gaps = 39/441 (8%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDY-----LSFVSG 196
NA E+F + S +R R+ +T L+++ R+G FIP+PG DR D L V G
Sbjct: 10 NAQETFLQMAQASGLRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGGVIG 69
Query: 197 SVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYI 255
+D G L F LGI P I ASI++Q+L VP+L L+K EG G KI
Sbjct: 70 FLDIFSGGGLS-ALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLT 128
Query: 256 WWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
++SLG+A+L+++++A + + YA + + TA LV G+M + WI + I+E G
Sbjct: 129 RYVSLGWALLQSIVIAVW---VTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV 375
G G+SL+I + I+ TL + L Q L + S +L ++ + TIV + V
Sbjct: 186 GNGASLLIFLNIVA----TLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGI--VF 239
Query: 376 VTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSI 433
V EG R++ + SA R+ + +E Y+P +N G+ P++ + +L P
Sbjct: 240 VQEGTRRI-------PVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFS 292
Query: 434 LASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF---DIANLPKEIADYL 490
LA+ + + L+P G PW+Y Y + F+ F I N P ++A L
Sbjct: 293 LANFTSNEVVLRIANYLSPN---GPTPWIYALFYLVLIVAFSYFYSSLILN-PVDLAQNL 348
Query: 491 NKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIG 549
KMG+ IP V+PG+AT +Y+ + G + L ++A T ++ R R +GF G
Sbjct: 349 KKMGSSIPGVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGF--G 406
Query: 550 FTSVLIIVGSIIELRRSYQAY 570
TS+LI+VG I+ + Q Y
Sbjct: 407 ATSLLILVGVAIDTAKQVQTY 427
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 225/445 (50%), Gaps = 43/445 (9%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAEL-KL 210
E+R++ T ++ VI R+G IP+PG + + +D+L GSV L D G L +L
Sbjct: 12 KELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNLGRL 70
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGFAILEAVI 269
+ F LG+ P I ASI+MQ+L +PSL +L KE D G KI Y +++L A ++++
Sbjct: 71 TVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLG 130
Query: 270 VACY----SLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIIC 324
+A + P I + + +++T LV G M + WI D I+E G G G+SLII
Sbjct: 131 IAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIF 190
Query: 325 VGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKV 383
GI+ + + + Y + P L L+ I + +V V E R++
Sbjct: 191 AGIVANFPNAVIQF--------YEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRI 242
Query: 384 KLQYYGFKLAS---AAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 440
+QY G ++ A R+ Y+P INP+G+ P++ LL PS L + + +
Sbjct: 243 PIQYPGRQVGRQLYAGRKT--------YLPIKINPAGVIPIIFAQALLLIPSTLLNFVQN 294
Query: 441 PFWQHVKEILNPETSVGARPWVYYT-IYAFFVFLFNIFDIANL--PKEIADYLNKMGARI 497
PF + + ++ P GA ++Y +Y F+ F F A L P E+A+ L+K GA I
Sbjct: 295 PFIKVIADMFQP----GA---IFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFI 347
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P V+PG+ T++YL +I F+G L LS++A ++ + N F G T+ LI+V
Sbjct: 348 PGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWF---NIPFYFGGTTALIVV 404
Query: 558 GSIIELRRSYQAYNVMPSLSKALRR 582
G ++ R + Y + +RR
Sbjct: 405 GVALDTFRQIETYLIQKKYKSYVRR 429
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 219/429 (51%), Gaps = 43/429 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L IVP+L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
I++G L K +Q + +S+++ F + +F ++ + + V EG R++
Sbjct: 173 FQNIVSG----LPKNFTQSFFDASYSNASLKFGLF----IAIFLLMIIITICVQEGTRRI 224
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
K+ +++ S I + Y+P +N G+ P++ + +A PS L I+ +
Sbjct: 225 KI------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTL 278
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 501
+ + P S+ Y +Y + F+ F I P++IA L KMGA IPN++
Sbjct: 279 LQILYLFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIR 332
Query: 502 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 561
PG+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I
Sbjct: 333 PGQATIDYLQVILNRLTFLGASFLFTVALIPFIIEK-VTQIQNLRGLGATSLLILVGVAI 391
Query: 562 ELRRSYQAY 570
+ + Q Y
Sbjct: 392 DTAKQIQTY 400
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 221/429 (51%), Gaps = 43/429 (10%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDF 204
KS++R R+ T +L+V++R+G FIP+PG D + ++L+ SG G F
Sbjct: 4 KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 58
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISLGFA 263
+ F LGI P I +SI+MQ+L I+P L +L+KE G G +KI +++LG+A
Sbjct: 59 ST---IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWA 115
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
L++ ++ + PY + + V + L G+M + W+ + I+E G G G+SL+I
Sbjct: 116 TLQSGAISIWVKPY---VFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 172
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
I++G L K +Q + +S+++ F++ +F ++ + + V EG R++
Sbjct: 173 FQNIVSG----LPKNFTQSFFDANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRI 224
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
K+ +++ S I + Y+P +N G+ P++ + +A P+ L + + F
Sbjct: 225 KI------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFL 278
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVK 501
V + P S+ Y +Y+ + F+ F I P++IA L KMGA IPN++
Sbjct: 279 LQVLYLFCPNGSL------YLVLYSVLILFFSYFYTSIVMNPEDIATNLKKMGASIPNIR 332
Query: 502 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 561
PG+ATI+YL I F G L +A I++ + +I +G TS+LI+VG I
Sbjct: 333 PGQATIDYLQVILNRLTFLGATFLFTVALIPFIIEK-VAQIQNLRGLGATSLLILVGVAI 391
Query: 562 ELRRSYQAY 570
+ + Q Y
Sbjct: 392 DTAKQIQTY 400
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 209/427 (48%), Gaps = 23/427 (5%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG--A 206
+FFK+ E+R ++F T ++VI +IG +IP PG + + S G D L FG A
Sbjct: 7 NFFKTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGS--QGVTDLLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
S F +GI P I ASI+MQ+L IVP + K+G G +K+ + + ++ A +
Sbjct: 65 LKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y S ++ A +L G + W+ + I++ G G G S+II
Sbjct: 125 QSIGMAFQFNNYLKGALIIDPSPMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIII 184
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
GIL+ +L + Q V + + W + GL+ ++TM AV V + RK+
Sbjct: 185 FAGILSTLPSSLIQFYQQAFVGQ---SDTTMAWLQVAGLVIGLVLLTMGAVYVLQAVRKI 241
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
+QY K S R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSTQRLGSNAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTMFFPKADW 295
Query: 444 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 502
Q + NP +++G +Y + F + + + P++++D L K G+ +P ++P
Sbjct: 296 AQQIANTANPSSNIGMV--IYIILIIAFTYFYAFVQVN--PEKMSDNLKKQGSYVPGIRP 351
Query: 503 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 562
G+ T +Y+TK+ F G + L+++A + ++ + + +G TS+LI++G IE
Sbjct: 352 GEQTKKYITKVLYRLTFVGSIFLAVIAILPILATKFM-NLPQSIQVGGTSLLIVIGVAIE 410
Query: 563 LRRSYQA 569
+S +A
Sbjct: 411 TMKSLEA 417
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 211/427 (49%), Gaps = 26/427 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
GIL+ +L + VF +S+ W +LGL+ ++T+ A+ V E RK+
Sbjct: 185 FAGILSTLPSSLEQFAQS--VFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKI 241
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEW 295
Query: 444 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 502
Q++ + NP +++G +Y + F + + + P+++AD L K G+ +P ++P
Sbjct: 296 AQNIADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRP 351
Query: 503 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 562
G+ T +Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE
Sbjct: 352 GEQTKKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIE 410
Query: 563 LRRSYQA 569
++ +A
Sbjct: 411 TMKTLEA 417
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 211/427 (49%), Gaps = 26/427 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI--PQDYLSFVSGSVDELGDFG--A 206
F E+R ++F T ++VI +IG +IP PG + PQ G+ + L FG A
Sbjct: 9 FTTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGS----QGATELLNTFGGGA 64
Query: 207 ELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
+ S F +GI P I ASI+MQ+L IVP + K+G G KI + + ++ A +
Sbjct: 65 LKRFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFI 124
Query: 266 EAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
+++ +A Y SV ++ A +L G + W+ D I++ G G G SLII
Sbjct: 125 QSIGMAFQFNNYLKGQLIIEKSVMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLII 184
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
GIL+ +L + VF +S+ W +LGL+ ++T+ A+ V E RK+
Sbjct: 185 FAGILSTLPSSLEQFAQS--VFVGQDDTSLAWLK-ILGLIVALILLTVGAIFVLEAKRKI 241
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
+QY K SA R S T Y+P +N +G+ PV+ P L W
Sbjct: 242 PIQYA--KKQSAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFFPKAEW 295
Query: 444 -QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKP 502
Q++ + NP +++G +Y + F + + + P+++AD L K G+ +P ++P
Sbjct: 296 AQNIADTANPSSNIGM--IIYVVLIIAFAYFYAFVQVN--PEKMADNLKKQGSYVPGIRP 351
Query: 503 GKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE 562
G+ T +Y+TK+ F G + L+ +A I ++ + + IG TS+LI++G IE
Sbjct: 352 GEQTKKYITKVLYRLTFVGSIFLAAIAILPIIATKFM-GLPQSIQIGGTSLLIVIGVAIE 410
Query: 563 LRRSYQA 569
++ +A
Sbjct: 411 TMKTLEA 417
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 150 SFFKS-EIRRRLFVTAVLIVISRIGYFIPLPG-----FDRRLIPQDYLSFVSGSVDELGD 203
+FF++ E+R ++F T ++VI +IG +IP PG FD PQ G+ + L
Sbjct: 7 NFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDN---PQGS----QGATELLNT 59
Query: 204 FG--AELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
FG A + S F +GI P I ASI+MQ+L IVP + K+G G K+ + ++++
Sbjct: 60 FGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRYLAI 119
Query: 261 GFAILEAVIVACYSLPY--SIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ +A Y + S+ ++ A +L G + W+ D I++ G G G
Sbjct: 120 SLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAGTAFLIWLGDQITQFGVGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GIL+ +L + V + +S+ W +LGLL ++T+ A+ V E
Sbjct: 180 ISIIIFAGILSTLPASLIQFGQTAFVGQ--EDTSLAWLK-VLGLLVSLILLTVGAIYVLE 236
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASIL 438
RK+ +QY K +A R S T Y+P +N +G+ PV+ P L
Sbjct: 237 AVRKIPIQYA--KKQTAQRLGSQAT----YLPLKVNSAGVIPVIFAMAFFLLPRTLTLFY 290
Query: 439 GSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
W Q++ NP ++VG VY + F + + + P+++AD L K G+ +
Sbjct: 291 PDKEWAQNIANAANPSSNVGMV--VYIVLIILFTYFYAFVQVN--PEKMADNLKKQGSYV 346
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +Y+TK+ F G + L++++ + ++ + + IG TS+LI++
Sbjct: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFM-GLPQSIQIGGTSLLIVI 405
Query: 558 GSIIELRRSYQA 569
G IE +S +A
Sbjct: 406 GVAIETMKSLEA 417
>sp|P38397|SECY_PYRSA Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina
GN=secY PE=3 SV=1
Length = 412
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 214/430 (49%), Gaps = 50/430 (11%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQD--------YLSFVSGSVDELGDF 204
K I+ R+F+T L+V+SR+G FIP+PG D Q +L+ SG G F
Sbjct: 10 KEGIKERIFLTIGLLVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSG-----GGF 64
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIKSYIWWISLGFA 263
+ + F LGI P I ASI++Q+ +P+L +L+K EG G +KI + +LG+A
Sbjct: 65 AS---IGIFALGIVPYINASIVIQLATTSIPNLEKLQKEEGEAGRQKISQITRYRALGWA 121
Query: 264 ILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++++ V+ + PY S V + + L G+M + W + I+E G G G SL+I
Sbjct: 122 AIQSLGVSFWVRPYVFNWDSQFVVQMTLA---LTTGSMLIMWFSEQITEKGIGNGPSLLI 178
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
+ I+ G L K++ Q K A SS +V + ++ V + +
Sbjct: 179 FINIIAG----LPKLIQQ----KSNAISSTNQ---------TTELVVLASISVYDSRIFI 221
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
+ + Y + L + R + Y+P +N G+ P++ + +L P+ L ++ + F
Sbjct: 222 RDRRY-YILQTVGRH----CKQTSYLPLRLNQGGVMPIIFASAILVLPAYLGQVIQNQFV 276
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL---PKEIADYLNKMGARIPNV 500
+ +L+P +S Y I+ F + LF + A+L P +++ L KM + IP V
Sbjct: 277 LKLVTLLSPNSSDKN----LYLIFYFSLILFFSYFYASLIINPNDVSQNLKKMESSIPGV 332
Query: 501 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 560
+PGKAT +YL K F G L L+ +A +I+++ + I+ +G TS+LI+VG
Sbjct: 333 RPGKATTDYLQKTLNRLTFLGALFLAFIAVVPSIIEN-ITSISTFKGLGATSLLILVGVA 391
Query: 561 IELRRSYQAY 570
I+ R Q Y
Sbjct: 392 IDTSRQIQTY 401
>sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays
GN=SECY PE=2 SV=1
Length = 553
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 204/425 (48%), Gaps = 32/425 (7%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 135 FFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLL-GTLDSFSGGGIG- 192
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L RKEG G +K+ Y + S+GFAI++A
Sbjct: 193 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 252
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 253 IGQVLYLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 309
Query: 328 LTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 387
++ + + ++Q + G+ V +L F ++ + V V E RK+ L Y
Sbjct: 310 ISYLPASFGRTVAQ----AFQDGNYVGLLTIILS----FLLLVLGIVYVQEAERKIPLNY 361
Query: 388 YGFKLASAAREDSPITEVE--PYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQH 445
A+R S E++ Y+PF +N SG+ P++ +T LA P LA G F +
Sbjct: 362 -------ASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKK 414
Query: 446 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 505
LNP ++ V + AFF + + + P ++++ L + GA IP V+PGK+
Sbjct: 415 AAIALNPGGALYLPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKS 470
Query: 506 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELR 564
T Y+ + G L++LA ++++ GF+ TSVLI+VG +
Sbjct: 471 TAAYIKTVLNRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFA--GTSVLILVGCATDTA 528
Query: 565 RSYQA 569
R QA
Sbjct: 529 RKVQA 533
>sp|P28539|SECY_CHLTR Protein translocase subunit SecY OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=secY PE=3 SV=3
Length = 457
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 43/449 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMRESPDQGKRKLGRMTRLFTLVL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T +++ G + + W+ +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGVPWVFYLTTVVVMITGTLLLMWVGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGS---SVRWWPFMLGLLGVF 366
IS+ G G G SLII +GIL + L + ++L GS S +L L VF
Sbjct: 186 ISDKGIGNGISLIITLGILASFPSVLGSIFNKL-----NLGSQDPSEFGIVSLLILCAVF 240
Query: 367 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY 426
V M V++ EG RK+ +Q+ + RE + Y+P +N +G+ PV+ +
Sbjct: 241 VFVLMATVLIIEGMRKIPVQHA--RRIIGRRE---VVGGGSYLPLKVNYAGVIPVIFASS 295
Query: 427 LLAFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL-- 482
LL FP+ + L S + + + +L+P + Y Y + F F A
Sbjct: 296 LLMFPATIGQFLSSESSWLKRIATMLSPGSV------AYSIFYVLLIIFFTYFWTATQFR 349
Query: 483 PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-R 541
P++IA + K GA IP ++ GK T YL G + L+++A +IL LR
Sbjct: 350 PEQIASEMKKNGAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVVAILPSILGRILRVD 409
Query: 542 INEGFSIGFTSVLIIVGSIIELRRSYQAY 570
N + +G T++LI+VG I++ + A+
Sbjct: 410 ANVSYFLGGTAMLIVVGVILDTMKQIDAF 438
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 207/441 (46%), Gaps = 34/441 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--GAELKL 210
K E++ RL +++ RIG FIP+PG D ++ Q +D F GA +
Sbjct: 16 KGELKSRLLFVLGALIVYRIGSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + ++ FA ++AV +
Sbjct: 76 SILALGIMPYISASIVIQLLATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAI 135
Query: 271 ACYSLPYSIYAASHSV--KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
+ LP + +V + LV G M + W+ + I+E G G G S+++ GI+
Sbjct: 136 ST-GLPNMLSGLVPNVGFSFYFTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIV 194
Query: 329 TGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTI-VTMWAVVVTEGCRKVKLQY 387
G + + + Q + P +L L+ VT + V V G R+++++Y
Sbjct: 195 AGLPSAILQTIEQ--------ARQGQMHPLVLLLIAAIVFAVTYFVVFVERGQRRIRVEY 246
Query: 388 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS----PFW 443
A + + ++P +N + + P + + ++ FP+ L G +
Sbjct: 247 -----AKRQQGRQILGGHSTHLPLKVNMANVMPAIFASSIILFPATLTQWFGQNDKFEWL 301
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPNVK 501
++ +LNP +P +Y +YA + F+ F A P++ AD L K GA IP ++
Sbjct: 302 NNLSMLLNP-----GQP-LYLLVYAVAIIFFSFFYTAMQYNPRDTADNLKKSGAFIPGIR 355
Query: 502 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 561
PG+ T Y+ K+ GGL ++ + I+ + F G TS+LI+V I+
Sbjct: 356 PGEQTSRYIDKVMTRLTLIGGLYVTFVCLVPYIMTSAW---DVKFYFGGTSLLIVVVVIM 412
Query: 562 ELRRSYQAYNVMPSLSKALRR 582
+ Q++ + AL++
Sbjct: 413 DFIVQVQSHLMSSQYESALKK 433
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 218/446 (48%), Gaps = 47/446 (10%)
Query: 146 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--------DYLSF 193
+A E+F + + +R RL +T L+++ R+G FIP+P DR+ Q +L+
Sbjct: 10 SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69
Query: 194 VSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRK-EGLDGHEKIK 252
+G G + F LGI P I ASI+MQ+L +P+L L+K EG G KI
Sbjct: 70 FTG--------GGLSTVGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 121
Query: 253 SYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISE 312
Y +I+ G+ I++ + + L YA ++ + T + G+M + WI + I+E
Sbjct: 122 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 179
Query: 313 SGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMW 372
G G G+SL+I V I+ TL + L Q + + + G +L L+ + IV +
Sbjct: 180 RGIGNGASLLIFVNIVA----TLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGI- 234
Query: 373 AVVVTEGCRKVKLQYYGFKLASAARE--DSPITEVEPYIPFNINPSGMQPVLTTTYLLAF 430
V V EG R++ + SA R+ E Y+P +N G+ P++ + +L
Sbjct: 235 -VFVQEGTRRIPI-------ISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLIL 286
Query: 431 PSILASI-LGSPFWQHVKEILNPETSVGARP--WVYYTIYAFFVFLFNIFD---IANLPK 484
PS LA G+ EI + S RP WVY +Y+ +F F+ F I N P+
Sbjct: 287 PSSLAGFATGNEGLGGFGEIF-VQISNALRPGTWVYTVVYSVMIFFFSYFYASLIVN-PE 344
Query: 485 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE 544
+++ L KMG+ IP ++PGK T +YL + F G + LS +AT ++ +
Sbjct: 345 DVSKNLKKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQ-ATGVTT 403
Query: 545 GFSIGFTSVLIIVGSIIELRRSYQAY 570
+G TS+LI+VG I+ + Q Y
Sbjct: 404 FQGLGATSLLILVGVAIDTAKQIQTY 429
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 217/430 (50%), Gaps = 24/430 (5%)
Query: 144 LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGD 203
+N + +S K +++ R+ T LIV+SR+G F+P+PG D Q +S + V+ L
Sbjct: 1 MNTSIKSIKKQDLKDRIVFTLFLIVMSRLGTFLPIPGVDHDAFYQSIIS--NPLVNFLNV 58
Query: 204 F--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKE-GLDGHEKIKSYIWWISL 260
F G + F LGI P I ASI++Q+ + +PSL +L+KE G G +KI +++L
Sbjct: 59 FSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQKIVQLTRYVAL 118
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
+A+++++ V+ + PY + + V + L G+M + W + I+E G G G S
Sbjct: 119 VWALIQSIGVSFWVRPY---VFNWDLNFVFAMSLTLTIGSMLIMWFSEQITEKGIGNGPS 175
Query: 321 LIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 380
L+I + I++G + L + + +++ + L+ +F+++ + + + EG
Sbjct: 176 LLIFINIISGLPKLLQSQIQ-------STRLNIQALDIFV-LVFIFSVMIIGIIFIQEGI 227
Query: 381 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 440
+++ + +++ + Y+P +N SG+ P++ + +L P+ LA ++ +
Sbjct: 228 KRIPI------ISARQLGKGQMDNKTSYLPLKLNQSGVMPIIFASAVLVLPAYLAQLVSN 281
Query: 441 PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNV 500
+ V + + ++ ++Y F F I N P +++ L KM + I V
Sbjct: 282 EQLRTVLHLFDGTSNNKLLYLLFYFTLILFFSYFYTSLILN-PNDVSKNLKKMESSIYGV 340
Query: 501 KPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSI 560
+PGKAT EYL K F G L L+ +A I++ L ++ +G TS+LIIVG
Sbjct: 341 RPGKATTEYLQKTLNRLTFLGALFLAFIAIVPNIIET-LTNLSVFKGLGGTSLLIIVGVQ 399
Query: 561 IELRRSYQAY 570
++ + Q Y
Sbjct: 400 VDTSKQIQTY 409
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 211/444 (47%), Gaps = 36/444 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q + SG+ G
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNV-QQCVREASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILE--AVIVACYSLPY----SIYAASHSVKHVMVTAFLLVC---GAMTMSWICD 308
+++ AIL+ ++ S P S+ + + T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTI 368
I++ G G G S+++ + I + L+ + Q G+ W ++ V I
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--------GTLAGGWIEFGTVIAVGLI 231
Query: 369 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 428
+ V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 232 MVALVVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLL 286
Query: 429 AFPSILASIL-GSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKE 485
P+++A G+ W K + + G P +Y Y + F F +A P+E
Sbjct: 287 YIPALVAQFAGGNSGW---KSWVEQNLTKGDHP-IYIVTYFLLIVFFAFFYVAISFNPEE 342
Query: 486 IADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEG 545
+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ ++
Sbjct: 343 VADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGA-SQN 401
Query: 546 FSIGFTSVLIIVGSIIELRRSYQA 569
F G TS+LIIVG +E + ++
Sbjct: 402 FPFGGTSILIIVGVGLETVKQIES 425
>sp|Q6ZG25|SECY_ORYSJ Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa
subsp. japonica GN=SECY PE=2 SV=1
Length = 556
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 26/422 (6%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAEL 208
FFK + + + +SR+G +IPL G +R D S + G++D G
Sbjct: 138 FFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLL-GTLDSFSGGGIG- 195
Query: 209 KLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEA 267
+L LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+GFAI++A
Sbjct: 196 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQA 255
Query: 268 VIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGI 327
+ + PY S + V+ + LL G++ ++I + IS+ G G+SL+I I
Sbjct: 256 IGQVLFLRPY---VNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 312
Query: 328 LTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQY 387
++ + + ++Q + G+ V +L F + + V V E RK+ L Y
Sbjct: 313 ISYLPASFGRTVAQ----AFQDGNYVGLLTIILS----FLFLVLGIVYVQEAERKIPLNY 364
Query: 388 YGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVK 447
AS S + Y+PF +N SG+ P++ +T LA P LA G F +
Sbjct: 365 -----ASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAA 419
Query: 448 EILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATI 507
LNP ++ V + AFF + + + P ++++ L + GA IP V+PGK+T
Sbjct: 420 ISLNPGGALYIPTNVL--LIAFFNYYYTFLQLD--PDDLSEQLKRQGASIPLVRPGKSTA 475
Query: 508 EYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIELRRSY 567
++ + ++ G L++LA ++++ + + TSVLI+VG + R
Sbjct: 476 AFIKTVLSNISVLGSAFLAVLAAGPSVVEQ-ITHLTAFRGFAGTSVLILVGCATDTARKV 534
Query: 568 QA 569
QA
Sbjct: 535 QA 536
>sp|F6CD01|SECY1_LACKZ Protein translocase subunit SecY 1 OS=Lactobacillus kefiranofaciens
(strain ZW3) GN=secY PE=3 SV=1
Length = 431
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 214/433 (49%), Gaps = 27/433 (6%)
Query: 142 SVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDEL 201
S L NA F EIR +++ T ++++ RIG I +PG + + I Q + + +D +
Sbjct: 3 STLKNA---FKDKEIRNKIYFTLFILLLYRIGANITVPGINVKAITQVAQTGLVPMLDTV 59
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
G + S F LG+SP I A I++Q+L IVP+LV+ K+G G K +++L
Sbjct: 60 SGGGLD-NYSIFSLGVSPYITAQIVIQLLQMDIVPTLVEWGKQGEVGRRKTNQVTRYLTL 118
Query: 261 GFAILEAVIVAC--YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++++ + +L + + + + A ++ G M ++W+ D I++ G G G
Sbjct: 119 VVAFVQSIGITLGFNALTQMGLVKNQTPQTYVEIAIIMTAGTMLLTWLGDEITDKGLGNG 178
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWP--FMLGLLGVFTIVTMWAVVV 376
S+II GI+ LY++ + ++ +S RW F + ++ IVT V
Sbjct: 179 VSVIIFAGIIARLPSGLYQIYKEEII---NNSASDRWQGILFFIAVIVAILIVTQLVTWV 235
Query: 377 TEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFP-SILA 435
+ R++ +QY + I+ E ++P +N SG+ PV+ + + P +IL
Sbjct: 236 EQADRRIPIQY---------TRRATISGSESFLPLKVNVSGVIPVIFASSFIVTPATILM 286
Query: 436 SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKM 493
+ + Q +++N S+ P V IY + LF F + P+++A+ L K
Sbjct: 287 AFQRTQGDQQWFKVMNQIFSLQTTPGV--IIYTLLIILFTFFYAFVQVNPEKLAENLQKQ 344
Query: 494 GARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV 553
GA IP+V PGK T +Y++K+ G + L ++A + ++ + +G TS+
Sbjct: 345 GAYIPSVWPGKDTQDYVSKMLIKLSTVGSIFLGLVALLPQLATNFW-NLPSSIGLGGTSL 403
Query: 554 LIIVGSIIELRRS 566
LI++G ++EL R
Sbjct: 404 LIVIGVVLELSRQ 416
>sp|Q9PJN1|SECY_CHLMU Protein translocase subunit SecY OS=Chlamydia muridarum (strain
MoPn / Nigg) GN=secY PE=3 SV=1
Length = 457
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 219/452 (48%), Gaps = 49/452 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGF--DRRLIPQDYLSFVSGSVDELGDF-- 204
+ F SE+R+++F T L+ + RIG FIP+PG DR + + L S ++ +L D
Sbjct: 6 QVFSISELRQKIFFTFSLLALCRIGVFIPVPGINGDRAVAYFNQLLGSSQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+L +P+L + +E D G K+ +L
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLLVVFMPTLQREMREAPDQGKRKLGRMTRLFTLLL 125
Query: 263 AILEAVIVACYSL------PYSIYAASHSVK-------HVMVTAFLLVCGAMTMSWICDT 309
A +++++ A ++L P + A S+K + T ++ G + + WI +
Sbjct: 126 ACVQSLLFAKFALRMNLVVPGIVLPAMLSLKLFGIPCVFYLTTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGS---SVRWWPFMLGLLGVF 366
IS+ G G G SLII +G+L + L + ++L GS S +L L VF
Sbjct: 186 ISDKGIGNGISLIITLGMLASFPSVLGSIFNKL-----NLGSQDPSEFGIVSLLVLCAVF 240
Query: 367 TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEV---EPYIPFNINPSGMQPVLT 423
V M V++ EG RKV +Q+ AR EV Y+P +N +G+ PV+
Sbjct: 241 VFVLMATVLIIEGVRKVPVQH--------ARRIIGRREVLGGGSYLPLKVNYAGVIPVIF 292
Query: 424 TTYLLAFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIAN 481
+ LL FP+ + L S + + + +L+P + VY Y + F F A
Sbjct: 293 ASSLLMFPATIGQFLSSESSWLKRIATMLSPGSV------VYSIFYVLLIIFFTYFWTAT 346
Query: 482 L--PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL 539
P++IA + K GA IP ++ GK T YL G + L+++A +IL L
Sbjct: 347 QFRPEQIASEMKKNGAFIPGIRQGKPTQSYLEYTMNRVTLLGAVFLAVVAILPSILGRIL 406
Query: 540 R-RINEGFSIGFTSVLIIVGSIIELRRSYQAY 570
R N + +G T++LI+VG +++ + A+
Sbjct: 407 RVDANVSYFLGGTAMLIVVGVVLDTMKQIDAF 438
>sp|Q9XQU4|SECY_PEA Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum
GN=SECY PE=2 SV=1
Length = 527
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 196/432 (45%), Gaps = 46/432 (10%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRL----IPQDYL-----SFVSGSVDEL 201
FF + + + +SR+G +IPL G +R + Q+ L SF G + L
Sbjct: 111 FFNGPLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRL 170
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISL 260
G LGI P I A I+ Q+L + P L L +KEG G +K+ Y + S+
Sbjct: 171 G---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASV 221
Query: 261 GFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSS 320
GFAI++A+ + PY A + + + + LL G++ ++I + I+E G G+S
Sbjct: 222 GFAIVQAIGQVLFLRPY---ANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTS 278
Query: 321 LIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGC 380
L+I I++ + + SQ G F L +LG+ V V E
Sbjct: 279 LLIFTNIISYLPASFGRTFSQAFSDANYVGLVTIIVSFFLLVLGI--------VYVQEAE 330
Query: 381 RKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS 440
RK+ + Y AS S E Y+PF +N SG+ P++ +T LA P LA G
Sbjct: 331 RKIPINY-----ASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGL 385
Query: 441 PFWQHVKEILNPETSVGARPWVYYTIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIP 498
+ LNP G ++ + I AFF + + + P ++++ L + GA IP
Sbjct: 386 SSLKTAAVALNP----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIP 439
Query: 499 NVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRIN-EGFSIGFTSVLIIV 557
V+PGK+T ++ + + G L+ILA +++ GF+ TS+LI+V
Sbjct: 440 LVRPGKSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFA--GTSILILV 497
Query: 558 GSIIELRRSYQA 569
G + R +A
Sbjct: 498 GCATDTARKVRA 509
>sp|P46249|SECY_CYACA Protein translocase subunit SecY OS=Cyanidium caldarium GN=secY
PE=2 SV=2
Length = 410
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 209/423 (49%), Gaps = 32/423 (7%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFGAELKLSF 212
++ +R RLF T I + R+G F+P+PG D++L DY + ++ + D KLS
Sbjct: 4 ENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSV 63
Query: 213 FQLGISPQIVASILMQVLCHIVPSLVQLR-KEGLDGHEKIKSYIWWISLGFAILEAVIVA 271
F LGI P I A+I +Q+L P+L +L+ +EG G +K+ ++S FA +E++ +
Sbjct: 64 FALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESLAIV 123
Query: 272 CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGY 331
L YA ++ ++ T +L+ GAM + W+ D IS G G G+S+II V I + +
Sbjct: 124 ---LRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF 180
Query: 332 TETLYKMLSQLLVFKYTAGSSVRWWPFMLGL-LGVFTIVTMWAVVVTEGCRKVKLQYYGF 390
+ L L+QL V S+++ F L VF+I + V V E RKV +
Sbjct: 181 AKFL---LNQLFV------HSIKFLDFASYFALIVFSIACI--VFVQEAIRKVPI----- 224
Query: 391 KLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEIL 450
+++ + + + ++P IN G+ P++ + LLA + G Q V I
Sbjct: 225 -ISAKQLDSTSFYSNDYFLPLRINQGGVMPIILASSLLALVDYVIR-YGLSTLQAVYFI- 281
Query: 451 NPETSVGARPWVYYTIYAFFVFLFNIFDIANLPK--EIADYLNKMGARIPNVKPGKATIE 508
+ ++ +Y+ F+ FN + + E+++ L K IP+++PGK T +
Sbjct: 282 ---NDILPFKILFLLLYSAFIIFFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEK 338
Query: 509 YLTKIQASTRFWGGLLLSILATSSTILDHYLR-RINEGFSIGFTSVLIIVGSIIELRRSY 567
+ + +G L+ + + L+ R+ +G ++ +S+LI+VG I+L +
Sbjct: 339 FFKDTLDNLTLFGSGFLAFIVLAPNFLEFVFHIRVFKGLAV--SSLLIVVGVAIDLIKQS 396
Query: 568 QAY 570
+ Y
Sbjct: 397 KTY 399
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 211/437 (48%), Gaps = 52/437 (11%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFD--------RRLIPQDYLSFVSGSVDELGDFGA 206
E+R R+ T + +++ R+G +IP+PG + RR+ ++ + D GA
Sbjct: 13 ELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDVFTG-GA 71
Query: 207 ELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
+ S F + ++P I ASI++Q+L ++PSL ++ +EG +G +K Y ++L +
Sbjct: 72 LSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQ 131
Query: 267 AVIVA---CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
A V+ S P + + ++ +++ ++ G M + W+ + I+E G G G S++I
Sbjct: 132 AFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILI 191
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRK 382
GI+ Y + + Y G ++ W F++ + ++T++ ++ V + R+
Sbjct: 192 FAGIVARYPSYIRQ--------AYLGGLNLLEWIFLIAV----ALITIFGIILVQQAERR 239
Query: 383 VKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPF 442
+ +QY A Y+P +N G+ P++ + +++ PS +ASI +
Sbjct: 240 ITIQY-----ARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-- 292
Query: 443 WQHVKEILNPETSVGARPWVYYTIYAFFVFLFN------IFDIANLPKEIADYLNKMGAR 496
+ +K + A ++Y IY VF F IFD P+EI++ + K G
Sbjct: 293 -ETLKNLFR------AGGFLYLLIYGLLVFFFTYFYSVVIFD----PREISENIRKYGGY 341
Query: 497 IPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLII 556
IP ++PG++T +YL ++ F G + L ++A ++ I IG TS LI
Sbjct: 342 IPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQG---AIKVNVWIGGTSALIA 398
Query: 557 VGSIIELRRSYQAYNVM 573
VG +++ + + + VM
Sbjct: 399 VGVALDIIQQMETHMVM 415
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 200/428 (46%), Gaps = 38/428 (8%)
Query: 151 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDE------LGDF 204
FFK + + + +SR+G +IPL G +R +FV G++D+ L F
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRE-------AFV-GNLDQNSILSTLDTF 184
Query: 205 --GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL-RKEGLDGHEKIKSYIWWISLG 261
G +L LGI P I A I+ Q+L + P L L +KEG G +KI Y + S+G
Sbjct: 185 SGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVG 244
Query: 262 FAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
FAI++A+ Y PY S + V+ + LL G++ ++I + IS+ G G+SL
Sbjct: 245 FAIVQAIGQVFYLRPY---VNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSL 301
Query: 322 IICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCR 381
+I I++ + + ++ L G F+L +LG+ V V E R
Sbjct: 302 LIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGI--------VYVQEAER 353
Query: 382 KVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP 441
K+ L Y AS + + Y+PF +N +G+ P++ +T LA P+ LA G
Sbjct: 354 KIPLNY-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGIS 408
Query: 442 FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVK 501
++V L P S + + AFF + + + P ++++ L + GA IP V+
Sbjct: 409 ALKNVAFALTPGGSFYLPTNIL--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVR 464
Query: 502 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 561
PGK+T ++ + G L++LA +++ + + TSVLI+VG
Sbjct: 465 PGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCAT 523
Query: 562 ELRRSYQA 569
+ R QA
Sbjct: 524 DTARKVQA 531
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 200/441 (45%), Gaps = 40/441 (9%)
Query: 148 AESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF--- 204
A +F ++R++L T +IVI R+G IP PG D + Q SG + L
Sbjct: 6 ARAFKTPDLRKKLLFTLGIIVIYRLGAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSG 65
Query: 205 GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAI 264
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++++ AI
Sbjct: 66 GALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAI 125
Query: 265 LEAVIVACYSLPYSIY---------AASHSVKHVMVTAFLLVCGAMTMSWICDTISESGF 315
L+ + + +++ A S+ ++ + G + W+ + I++ G
Sbjct: 126 LQGTGLVATARSGALFQNCSVGSQIVADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGI 185
Query: 316 GQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV 375
G G S+ + + I + L+ + K + + W F +L F +V + V
Sbjct: 186 GNGMSIPMFISIAATFPGALWAI-------KESGKLADGWIEFGTVILIGFVMVAL-VVF 237
Query: 376 VTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILA 435
V + R++ +Q L YIP +N +G+ PV+ + LL P+++
Sbjct: 238 VEQAQRRIPVQ-----LPKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALIV 292
Query: 436 ----SILGSPFWQHVKEILNPETSVGARPW---VYYTIYAFFVFLFNIFDIANLPKEIAD 488
S G W + G P+ Y+ + FF F + I+ P E+AD
Sbjct: 293 QFSNSQAGWATW------IQDNFVTGDHPYYIATYFVLIVFFAFFY--VAISFNPDEVAD 344
Query: 489 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 548
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ N+ F
Sbjct: 345 NMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGGANQNFPF 404
Query: 549 GFTSVLIIVGSIIELRRSYQA 569
G TS+LIIVG +E + ++
Sbjct: 405 GGTSILIIVGVGLETVKQIES 425
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 52/436 (11%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDR-------RLIPQDYLSFVSGSVDEL 201
++F +++R+++F T +IV+ RIG IP PG D R + QD S S + L
Sbjct: 6 QAFKDADLRKKIFFTIAMIVLYRIGAQIPSPGVDYATISGRLRDLTQDQSSVYS--LINL 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLG 261
GA L+LS F +GI P I ASI++Q+L ++P +L+KEG G K+ Y ++++
Sbjct: 64 FSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVA 123
Query: 262 FAILEAV-IVA------CYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESG 314
A+L++ IVA + +A + ++V + GA+ + W+ + I+E G
Sbjct: 124 LALLQSSGIVALADREQLLGAGIRVLSADRNFFDLIVLVITMTAGAVLVMWMGELITEKG 183
Query: 315 FGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAV 374
G G SL+I GI T +L +G V F + L V I+ + V
Sbjct: 184 VGNGMSLLIFAGIATRLPTDGMNILG-------NSGGVV----FAVVLASVL-ILVIGVV 231
Query: 375 VVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL 434
V +G R++ +QY + S Y+P +N +G+ PV+ + L+ P ++
Sbjct: 232 FVEQGQRRIPVQYAKRMVGRRQYGGS-----STYLPLKVNQAGVIPVIFASSLIYMPVLI 286
Query: 435 ASILGSP-------FWQH--VKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLP 483
I+ S +WQ + + P + W Y +Y F+ F + P
Sbjct: 287 TQIVNSGSLEVSDNWWQRNIIAHLQTPSS------WQYIVLYFALTIFFSYFYVSVQYDP 340
Query: 484 KEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTI-LDHYLRRI 542
E A+ + K G IP ++PG+ T EYL + F G L L+++A I LD +
Sbjct: 341 AEQAENMKKYGGFIPGIRPGRPTAEYLGFVMNRLLFVGSLYLAVIAVLPNIMLDLGVDAG 400
Query: 543 NEGFS-IGFTSVLIIV 557
+ G + G T++LI+V
Sbjct: 401 SAGATPFGGTAILILV 416
>sp|P93690|SECY_SPIOL Preprotein translocase subunit SECY, chloroplastic OS=Spinacia
oleracea GN=SECY PE=2 SV=1
Length = 545
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 218/462 (47%), Gaps = 41/462 (8%)
Query: 120 NETFRSKPKMYKNRFLNFIRLSSVLNNAA---ESFFKSEIRRRLFVTAVLIVISRIGYFI 176
++TF S K+R + +++ + +++ FFK + + L+ +SR+G ++
Sbjct: 96 SQTFESSSGTRKDRSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLTLLGLLALSRLGIYV 155
Query: 177 PLPGFDRRLIPQ--DYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIV 234
PL G +R D SF+S ++D G +L LGI P I A I+ Q+L +
Sbjct: 156 PLGGVNREAFVGNLDQNSFIS-TLDSFSG-GGIGRLGICSLGIVPFINAQIVFQLLSQVY 213
Query: 235 PSLVQL-RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTA 293
P L L +KEG G +KIK Y + S+GFA+++A+ + PY +S + V+ +
Sbjct: 214 PKLQDLQKKEGEAGRKKIKQYTQYASVGFALVQAIGQVLFLRPY---VNDYSTEWVLSSV 270
Query: 294 FLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSV 353
LL G++ +++ + IS+ G G+SL+I I++ + + +++ G ++
Sbjct: 271 ILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTVAEAYQEGNYTGLAI 330
Query: 354 RWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNI 413
F+ + G+ V V E RK+ + Y AS S + Y+PF +
Sbjct: 331 IVVSFVSLVFGI--------VYVQEAERKIPMNY-----ASRYSGKSGGLQKSAYLPFKV 377
Query: 414 NPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYT-----IYA 468
N +G+ P++ +T L+ P+ LA G + L P S +Y + A
Sbjct: 378 NSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGS-------FYLPTNILLIA 430
Query: 469 FFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSIL 528
FF + + + P ++++ L + GA IP V+PGK+T Y+ + + G L+IL
Sbjct: 431 FFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGSGFLAIL 488
Query: 529 ATSSTILDHYLRRIN-EGFSIGFTSVLIIVGSIIELRRSYQA 569
A +++ GF+ TSVLI+VG + R QA
Sbjct: 489 AAGPAVVEQATHLTAFRGFA--GTSVLILVGCATDTARKVQA 528
>sp|P38375|SECY_BACHD Protein translocase subunit SecY OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=secY PE=3 SV=2
Length = 430
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 208/433 (48%), Gaps = 32/433 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVS--GSVDELGDFGAELKLS 211
++RR++ T +++++ RIG FIP+PG +R ++ D++ + G ++ G GA S
Sbjct: 12 GDLRRKVIFTLLMLIVFRIGSFIPVPGTNREVL--DFVDQANAFGFLNTFGG-GALGNFS 68
Query: 212 FFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
F +GI P I ASI+MQ+L +VP + KEG G K+ + + ++ ++A+ +
Sbjct: 69 IFAMGIMPYITASIVMQLLQMDVVPKFAEWAKEGEAGRRKLAQFTRYGTIVLGFIQALGM 128
Query: 271 AC-YSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
+ ++ + + SV + A +L G + W+ + I+ G G G S+II GI
Sbjct: 129 SVGFNNFFPGLIPNPSVSVYLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAA 188
Query: 330 GYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVV-VTEGCRKVKLQYY 388
G L + S + AG + ++ LL + + + V+ V + RK+ +QY
Sbjct: 189 GIPNGLNLIYSTRI---QDAGEQLFLNIVVILLLALAILAIIVGVIFVQQALRKIPVQY- 244
Query: 389 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS--PFWQHV 446
A +P+ ++P +N +G+ PV+ L FP +A + GS P V
Sbjct: 245 ----AKRLVGRNPVGGQSTHLPLKVNAAGVIPVIFALSLFIFPPTVAGLFGSDHPVAAWV 300
Query: 447 KEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKAT 506
E + +G VY + F + + + P+ +A+ L K G IP ++PGKAT
Sbjct: 301 IETFDYTHPIGMA--VYALLIIGFTYFYTFIQVN--PERMAENLKKQGGYIPGIRPGKAT 356
Query: 507 IEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE---- 562
Y+T+I F G L L+++A + + + IG T +LI+VG ++
Sbjct: 357 QTYITRILYRLTFVGSLFLAVVAILPVFFIKF-ADLPQAIQIGGTGLLIVVGVALDTMKQ 415
Query: 563 -----LRRSYQAY 570
++RSY+ +
Sbjct: 416 IEAQLIKRSYKGF 428
>sp|Q9Z7S5|SECY_CHLPN Protein translocase subunit SecY OS=Chlamydia pneumoniae GN=secY
PE=3 SV=1
Length = 457
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 217/462 (46%), Gaps = 50/462 (10%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVD--ELGDF-- 204
+ F +E+R++LF T L+ R+G FIP+PG + L + + + +L D
Sbjct: 6 QFFLITELRQKLFYTFALLTACRVGVFIPVPGINGELAVAYFKQLLGSGQNLFQLADIFS 65
Query: 205 -GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLD-GHEKIKSYIWWISLGF 262
GA +++ LG+ P I ASI++Q+ +P+L + +E D G +I ++
Sbjct: 66 GGAFAQMTVIALGVVPYISASIIVQLFLVFMPALQREMRESSDQGKRRIGRLTRLFTVAL 125
Query: 263 AILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLV-------------CGAMTMSWICDT 309
A++++++ A ++L ++ + ++ + V G + + WI +
Sbjct: 126 AVIQSLLFAKFALRMNLTIPGIVLPTLLSSKLFGVPWIFYITTVVVMTTGTLLLMWIGEQ 185
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIV 369
IS+ G G G SLII +GIL+ + L ++++L + + +L L+ VF ++
Sbjct: 186 ISDKGIGNGISLIIALGILSSFPSVLGSIVNKLNLGSQDSSDLGLISILILALVFVFVLI 245
Query: 370 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVE---PYIPFNINPSGMQPVLTTTY 426
T +++ EG RK+ +QY AR EV Y+P +N +G+ PV+ +
Sbjct: 246 T--TILIIEGVRKIPVQY--------ARRVIGRREVPGGGSYLPLKVNYAGVIPVIFASS 295
Query: 427 LLAFPSILASILGSP--FWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL-- 482
LL FP+ + + S + + + +L P + VY Y + F F A
Sbjct: 296 LLMFPATIGQFIASESSWMKRIAALLAPGS------LVYSICYVLLIIFFTYFWTATQFH 349
Query: 483 PKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLR-R 541
P++IA + K A IP ++ GK T YL G L L+ +A ++L LR
Sbjct: 350 PEQIASEMKKNNAFIPGIRQGKPTQHYLEYTMNRVTLLGALFLAAIAILPSLLGCLLRVD 409
Query: 542 INEGFSIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRY 583
N + +G T++LI+VG +++ + A+ +M RRY
Sbjct: 410 SNVSYFLGGTAMLIVVGVVLDTMKQVDAFLLM-------RRY 444
>sp|A3CK84|SECY_STRSV Protein translocase subunit SecY OS=Streptococcus sanguinis (strain
SK36) GN=secY PE=3 SV=1
Length = 435
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 214/438 (48%), Gaps = 40/438 (9%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
++F ++R ++ T +I++ RIG I +PG + + + + LS VSG+
Sbjct: 8 DAFKIKQVRSKILFTIFIILVFRIGTTITVPGINAKALSNLNDLPFLNMLSLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F LG+SP I ASI++Q+L ++P V+ K+G G K+ +I+L
Sbjct: 64 ----AMRNFSVFALGVSPYITASIVVQLLQMDLLPKFVEWGKQGEVGRRKLNQATRYIAL 119
Query: 261 GFAILEAV-IVACY-SLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A ++A+ I A + +L + A+ +V+ + LL G+M ++W+ + I++ G+G G
Sbjct: 120 VLAFVQAIGITAGFDTLSRANLVANPNVQTYALICVLLATGSMIVTWLGEQITDKGYGNG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
S+II GI++ + + + V + + F+ L+ ++ + V +
Sbjct: 180 VSMIIFAGIVSAIPDMIKGIYEDYFV-NIPSERLTSSFIFVGILIVAVLLIIYFTTFVQQ 238
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL---A 435
K+ +QY K+A A S Y+P +NP+G+ PV+ + + A P+ +
Sbjct: 239 AEYKIPIQYT--KVAKGAPSSS-------YLPLKVNPAGVIPVIFASSITAAPAAIFQVV 289
Query: 436 SILG-SPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNK 492
S LG W + L T++ +YAF + LF F + P++ A+ L K
Sbjct: 290 SALGYDADWVKTAQSLLATTTISGM-----FMYAFLIVLFTFFYTFVQINPEKTAENLQK 344
Query: 493 MGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTS 552
GA IP V+PGK T +Y++K+ G L L ++ IL + + + ++G TS
Sbjct: 345 SGAYIPGVRPGKGTEDYMSKLLRRLATVGSLFLGFISILP-ILAKDVFGLTDAVALGGTS 403
Query: 553 VLIIVGSIIELRRSYQAY 570
+LII+ + IE + + Y
Sbjct: 404 LLIIISTGIEGMKQLEGY 421
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 30/441 (6%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIP--QDYLSFVSGSVDE 200
+L A +F ++R++L T +IVI RIG IP+PG D + D SG
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVIYRIGTHIPIPGVDYSAVQFCIDQTKSNSGLFGL 60
Query: 201 LGDF--GAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWI 258
+ F GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y ++
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTVVIPRLEALKKEGQSGTAKITQYTRYL 120
Query: 259 SLGFAILEAVIVACYSLPYSIYAASHSVKHVM---------VTAFLLVCGAMTMSWICDT 309
++ A+L+ + + ++++ +++ + G + W+ +
Sbjct: 121 TVALAVLQGTGLVATARSGALFSQCPQANNIVPDDSIFTTLTMVVTMTAGTAVVMWLGEL 180
Query: 310 ISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIV 369
I++ G G G S+++ + I + L+ + Q AG W F + ++ V ++
Sbjct: 181 ITDRGIGNGMSILMFISIAATFPSALWSIKEQ----GDLAGG---WIEFGI-VIAVGLVM 232
Query: 370 TMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLA 429
V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 233 VALVVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGIIPVIFASSLLY 287
Query: 430 FPSILASILGS-PFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIAD 488
P+++ GS W + +T+ A VY+ + FF F + I+ P+E+AD
Sbjct: 288 IPALVVQFSGSTAGWAAWIQKNLADTAAPAHITVYFFLIIFFAFFY--VAISFNPEEVAD 345
Query: 489 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 548
+ K G IP ++ G+ T EYL+ + + G L L ++A T+ L N+ F
Sbjct: 346 NMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAPLGA-NQNFPF 404
Query: 549 GFTSVLIIVGSIIELRRSYQA 569
G TS+LIIVG +E + ++
Sbjct: 405 GGTSILIIVGVGLETVKQIES 425
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 202/439 (46%), Gaps = 32/439 (7%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKLS 211
E+R+R+ T +++ R+G FIP PG D I Q++L G V + + G + S
Sbjct: 13 ELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKI-QEFLRTAQGGVFGIINLFSGGNFERFS 71
Query: 212 FFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSY--IWWISLGF---AILE 266
F LGI P I A+I+MQ+L +VP+L +L KEG +G I Y I I+LG L
Sbjct: 72 IFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLA 131
Query: 267 AVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVG 326
+ + + S V V G + W+ + I+E G G G+SLII G
Sbjct: 132 TAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAG 191
Query: 327 ILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQ 386
I+ E L ++L + + + T ++ + F L + V M AV E R++ +Q
Sbjct: 192 IV---VEWLPQILRTIGLIR-TGEVNLVAFLFFLAFI-VLAFAGMAAVQQAE--RRIPVQ 244
Query: 387 YYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILAS-ILGSPFWQH 445
Y A YIP +N +G+ P++ +L P LA+ +P Q
Sbjct: 245 Y-----ARKVVGRRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQG 299
Query: 446 VKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKA 505
+ NP G V I +V+ FD PK IA+ L + G IP ++PG+
Sbjct: 300 IANFFNPTRPSGLFIEVLLVILFTYVYTAVQFD----PKRIAESLREYGGFIPGIRPGEP 355
Query: 506 TIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSV--LIIVGSIIEL 563
T+++L I + WG L L ++ T+L ++ + SI F+ + LI+VG ++
Sbjct: 356 TVKFLEHIVSRLTLWGALFLGLV----TLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDT 411
Query: 564 RRSYQAYNVMPSLSKALRR 582
R ++ ++ S L R
Sbjct: 412 LRQVESQLMLRSYEGFLSR 430
>sp|P27148|SECY_LACLC Protein translocase subunit SecY OS=Lactococcus lactis subsp.
cremoris GN=secY PE=3 SV=3
Length = 439
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 209/435 (48%), Gaps = 33/435 (7%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQ-------DYLSFVSGSVDEL 201
E+F ++R R+ T ++ + R+G I PG + + + Q ++ VSG+
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGN---- 63
Query: 202 GDFGAELKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISL 260
A S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L
Sbjct: 64 ----AMQNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITL 119
Query: 261 GFAILEAV-IVACYSLPYSIYAASH-SVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
A+ +++ I A + S+ + + + ++ LL G+M ++W+ + I+E GFG G
Sbjct: 120 VLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTGSMVVTWMGEQINEKGFGSG 179
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRW-WPFMLGLLGVFTIVTMWAVVVT 377
S+II GI++G + + + F S + W F++GL+ ++ V
Sbjct: 180 VSVIIFAGIVSGIPSAIKSVYDE--KFLNVRPSEIPMSWIFVIGLILSAIVIIYVTTFVQ 237
Query: 378 EGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASI 437
+ RKV +QY KL A S Y+P +NP+G+ PV+ + P+ +
Sbjct: 238 QAERKVPIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQF 288
Query: 438 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGA 495
L +V + + ++ W YA + LF F + P+++A+ L K G+
Sbjct: 289 LQRSQGSNVGWLSTLQNALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQGS 348
Query: 496 RIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLI 555
IP+V+PGK T +Y++++ G L L +++ I + + + ++G TS+LI
Sbjct: 349 YIPSVRPGKGTEKYVSRLLMRLATVGSLFLGLISIIP-IAAQNVWGLPKIVALGGTSLLI 407
Query: 556 IVGSIIELRRSYQAY 570
++ I+ + + Y
Sbjct: 408 LIQVAIQAVKQLEGY 422
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 206/445 (46%), Gaps = 38/445 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 1 MLTAFARAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + ++++ ++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTI 368
I++ G G G S+++ + I + L+ + Q G W ++ V +
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--------GELADGWIEFGTVILVGLV 231
Query: 369 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 428
+ V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 232 MVGLVVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLL 286
Query: 429 AFPSILA----SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPK 484
P+++ S G W I A P + + F F I+ P+
Sbjct: 287 YIPALIVQFSNSTAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPE 341
Query: 485 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE 544
E+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ N+
Sbjct: 342 EVADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQ 400
Query: 545 GFSIGFTSVLIIVGSIIELRRSYQA 569
F G TS+LIIVG +E + ++
Sbjct: 401 NFPFGGTSILIIVGVGLETVKQIES 425
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 206/456 (45%), Gaps = 69/456 (15%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
SL+I VGI +L +TA + I+ + V V +
Sbjct: 190 MSLLIFVGIAARIPAEGQSILESRGGVVFTA------------VCAAALIIIVGVVFVEQ 237
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL---- 434
G R++ +QY A Y+P +N +G+ PV+ + L+ P ++
Sbjct: 238 GQRRIPVQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLI 292
Query: 435 ---ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIAD 488
+ ++G+ +W + V L+ +++ VY IY + F F I P E AD
Sbjct: 293 RSGSGVVGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERAD 347
Query: 489 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 548
+ K G IP ++PG+ T +YL + + G + L ++A +L + +I G ++
Sbjct: 348 EMKKFGGFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTV 403
Query: 549 -----GFTSVLIIVGSIIE---------LRRSYQAY 570
G T+VLI++G ++ ++R+Y+ +
Sbjct: 404 QNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 206/456 (45%), Gaps = 69/456 (15%)
Query: 155 EIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---------G 205
++RR++ T ++++ R+G +P PG + P S E G G
Sbjct: 13 DLRRKILFTLGIVILYRVGAALPSPGVN---FPNVQQCIKEASAGEAGQIYSLINLFSGG 69
Query: 206 AELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAIL 265
A LKL+ F +G+ P I ASI++Q+L ++P +LRKEG G K+ Y ++++ AIL
Sbjct: 70 ALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAIL 129
Query: 266 EAVIVACYSLPYSIYA-------ASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQG 318
+A + + + A S+ ++V ++ GA + W+ + I+E G G G
Sbjct: 130 QATSIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNG 189
Query: 319 SSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTE 378
SL+I VGI +L +TA + I+ + V V +
Sbjct: 190 MSLLIFVGIAARIPAEGQSILESRGGVVFTA------------VCAAALIIIVGVVFVEQ 237
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSIL---- 434
G R++ +QY A Y+P +N +G+ PV+ + L+ P ++
Sbjct: 238 GQRRIPVQY-----AKRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLI 292
Query: 435 ---ASILGSPFW-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIF--DIANLPKEIAD 488
+ ++G+ +W + V L+ +++ VY IY + F F I P E AD
Sbjct: 293 RSGSGVVGNSWWDKFVGTYLSDPSNL-----VYIGIYFGLIIFFTYFYVSITFNPDERAD 347
Query: 489 YLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSI 548
+ K G IP ++PG+ T +YL + + G + L ++A +L + +I G ++
Sbjct: 348 EMKKFGGFIPGIRPGRPTADYLRYVLSRITLPGSIYLGVIA----VLPNLFLQIGAGGTV 403
Query: 549 -----GFTSVLIIVGSIIE---------LRRSYQAY 570
G T+VLI++G ++ ++R+Y+ +
Sbjct: 404 QNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYEGF 439
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 206/445 (46%), Gaps = 38/445 (8%)
Query: 143 VLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 202
+L A +F ++R++L T +IV+ R+G IP+PG D + + Q+ + SG+ G
Sbjct: 1 MLTAFAPAFKTPDLRKKLLFTLGIIVVYRLGTHIPIPGVDYKNV-QECVDQASGNQGLFG 59
Query: 203 -----DFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWW 257
GA L+++ F LGI P I ASI++Q+L ++P L L+KEG G KI Y +
Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLLTVVIPRLEALKKEGQAGTAKITQYTRY 119
Query: 258 ISLGFAILEAVIVACYSLPYSIYAASHSVKHVM------VTAFLLVC---GAMTMSWICD 308
+++ AIL+ + + ++++ ++ T +++C G + W+ +
Sbjct: 120 LTVALAILQGTGLVATARSGALFSGCTVAGQIVPDQAIFTTVVMVICMTAGTCVVMWLGE 179
Query: 309 TISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTI 368
I++ G G G S+++ + I + L+ + Q G W ++ V +
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQ--------GELADGWIEFGTVILVGLV 231
Query: 369 VTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLL 428
+ V V + R++ +QY + + + YIP +N +G+ PV+ + LL
Sbjct: 232 MVGLVVFVEQAQRRIPVQYAKRMIGRRSYGGT-----STYIPLKVNQAGVIPVIFASSLL 286
Query: 429 AFPSILA----SILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPK 484
P+++ S G W I A P + + F F I+ P+
Sbjct: 287 YIPALIVQFSNSTAGWATW-----ITKNLADTAATPHIILYFFLIVFFAFFYVAISFNPE 341
Query: 485 EIADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINE 544
E+AD + K G IP ++ G+ T EYL+ + + G L L ++A T+ N+
Sbjct: 342 EVADNMKKYGGFIPGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALAGFGA-NQ 400
Query: 545 GFSIGFTSVLIIVGSIIELRRSYQA 569
F G TS+LIIVG +E + ++
Sbjct: 401 NFPFGGTSILIIVGVGLETVKQIES 425
>sp|Q05207|SECY_BACLD Protein translocase subunit SecY OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=secY PE=3 SV=2
Length = 431
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 207/436 (47%), Gaps = 38/436 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLI-PQDYLSFVSGSVDELGDFGAELKLSF 212
+IR ++ T +++++ R+G FIP+P + ++ QD +S V G ++ G GA S
Sbjct: 12 KDIRNKIIFTLLMLIVFRLGSFIPVPHVNTEVLKAQDQMS-VFGILNTFGG-GALFNFSI 69
Query: 213 FQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWW--ISLGFAILEAVI 269
+GI P I ASI++Q+L +VP + K+G G K+ + + I LGF +
Sbjct: 70 LAMGIMPYITASIIIQLLQMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALGMS 129
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ V ++ A +L G + W+ + I+ G G G S+II GI+
Sbjct: 130 YGFNNMAGGALITDPGVGTYLLIAIVLTAGTAFLMWLGEQITSHGVGNGISIIIFAGIVA 189
Query: 330 GYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVV-----TEGCRKVK 384
G +T+ ++ +Q V AG + F+ + V +V + A+VV + RK+
Sbjct: 190 GIPQTINQIYAQQFV---DAGDQL----FLQIIKVVVILVAILAIVVGVIFIQQAVRKIS 242
Query: 385 LQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGS-PFW 443
+QY + R P + ++P +NP+G+ PV+ + P +A+ GS
Sbjct: 243 IQY----AKGSGRSPVPGGQ-STHLPLKVNPAGVIPVIFAVAFITTPRTVATFFGSNDVT 297
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPG 503
+++ + VG VY + F + + + P+++AD L K G IP V+PG
Sbjct: 298 NWIQKTFDYTHPVGM--GVYAALIIAFTYFYAFVQVN--PEQMADNLKKQGGYIPGVRPG 353
Query: 504 KATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSIIE- 562
K T + +T I F G + L+++A + + + + IG TS+LI++G +E
Sbjct: 354 KMTQDRITSILYRLTFVGSIFLAVIAILPVLFVN-IAGLPSSAQIGGTSLLIVIGVALET 412
Query: 563 --------LRRSYQAY 570
++R+Y+ +
Sbjct: 413 MKQLESQLVKRNYRGF 428
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 204/429 (47%), Gaps = 34/429 (7%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGF--DR--RLIPQDYLSFVSGSVDELGDFGAELK 209
SE+ RL + I++ RIG IP+PG DR L Q+ + +S + + GA +
Sbjct: 16 SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAALFRQNEGTILS--LFNMFSGGALER 73
Query: 210 LSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVI 269
+S F LGI P I ASI+MQ++ I P L QL+KEG G KI Y + ++ A+++A+
Sbjct: 74 MSIFALGIMPYISASIIMQLMTAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIG 133
Query: 270 VACYSLPYSIYAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILT 329
++ L A S+ V V GAM M W+ + I+E G G G S++I GI+
Sbjct: 134 MSV-GLGSQGVAFSNDFGFYFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVA 192
Query: 330 GYTETLYKMLSQLLVFKYTAGSSVRWWPFM-LGLLGVFTIVTMWAVVVTEGCRKVKLQYY 388
G + + F+ + + + +GLL V I + V + G R++ + Y
Sbjct: 193 GLPRAIGQ------SFESARQGDINIFALIGVGLLAVAIIA--FVVFIERGQRRIAVHY- 243
Query: 389 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSP----FWQ 444
A + ++P +N +G+ P + + +L FP+ L S G + Q
Sbjct: 244 ----AKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQSEGLGWLQ 299
Query: 445 HVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGK 504
V + + P + + ++ F + +F+ PK++A+ L K GA IP ++PG+
Sbjct: 300 DVAQAIAPGQPLNILLFTAGIVFFCFFYTALMFN----PKDVAENLKKSGAFIPGIRPGE 355
Query: 505 ATIEYLTKIQASTRFWGGLLLSILATSSTILDHYL-RRINEGFSIGFTSVLIIVGSIIEL 563
+ Y+ + +G L + T+ +L +L + F +G TS+LI+V +++
Sbjct: 356 QSARYIDGVLTRLTMFGALYM----TAVCLLPQFLVVAAHVPFYLGGTSLLIVVVVVMDF 411
Query: 564 RRSYQAYNV 572
Q++ V
Sbjct: 412 MAQVQSHLV 420
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 208/432 (48%), Gaps = 43/432 (9%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVG--LRSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIV--TMWAVVVTE- 378
II GI++G + F + +L L+G+ IV T++A++ E
Sbjct: 176 IIFAGIVSGIPSAISG------TFNLVNTGVIN----ILMLIGIVLIVLATIFAIIYVEL 225
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASI 437
R++ + Y A + + YIP +N SG+ P + + LL FPS IL
Sbjct: 226 AERRIPISY-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQA 280
Query: 438 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
+ Q V + L+P+ A + + + FF + ++ I K+IAD L + G I
Sbjct: 281 TSNKTLQAVADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYI 336
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +L + + WG L L++++T IL ++ + F G T+VLI+V
Sbjct: 337 PGLRPGEGTSSFLNSVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVV 393
Query: 558 GSIIELRRSYQA 569
I+ + +A
Sbjct: 394 QVAIDTMKKIEA 405
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 200/431 (46%), Gaps = 37/431 (8%)
Query: 154 SEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDF---GAELKL 210
SE++ RLF +++ R G F+P+PG D ++ + + G++ E+ + GA +
Sbjct: 17 SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQ-QKGTIVEMFNMFSGGALERA 75
Query: 211 SFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEAVIV 270
S LGI P I ASI++Q+L + P+L +L+KEG G KI Y + +L A +A+ +
Sbjct: 76 SILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGI 135
Query: 271 ACYSLPYSI--YAASHSVKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGIL 328
A LP + ++ LV G M + W+ + I+E G G G S++I GI+
Sbjct: 136 AT-GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIV 194
Query: 329 TGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKVKLQYY 388
G + + + + Q A +L + + V + V + G R++ + Y
Sbjct: 195 AGLPKAIGQTIEQ-------ARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNY- 246
Query: 389 GFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILG-----SPF- 442
A + ++P IN +G+ P + + ++ FP LA G S F
Sbjct: 247 ----AKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFG 302
Query: 443 W-QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANL--PKEIADYLNKMGARIPN 499
W V L+P +P +Y +YA + F F A + P+E AD L K GA +P
Sbjct: 303 WLTDVSLALSP-----GQP-LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPG 356
Query: 500 VKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGS 559
++PG+ T +Y+ K+ G L ++ + I + + N F G TS+LI+V
Sbjct: 357 IRPGEQTAKYIDKVMTRLTLAGALYITFIC---LIPEFMMVAWNVRFYFGGTSLLIVVVV 413
Query: 560 IIELRRSYQAY 570
I++ Q +
Sbjct: 414 IMDFMAQVQTH 424
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 208/432 (48%), Gaps = 43/432 (9%)
Query: 153 KSEIRRRLFVTAVLIVISRIGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFG-----AE 207
I ++ +T + + R+ +IP+PG D I F S S + LG F A
Sbjct: 2 NKAIASKILITLGFLFLYRVLAYIPIPGVDLAAIKA---FFDSNSNNALGLFNMFSGNAV 58
Query: 208 LKLSFFQLGISPQIVASILMQVLCHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILEA 267
+LS LGI P I +SI+M++L P+L +++KE DG +K + ++++ +++A
Sbjct: 59 SRLSIISLGIMPYITSSIIMELLSATFPNLAKMKKER-DGMQKYMQIVRYLTILITLIQA 117
Query: 268 VIVACYSLPYSIYAASHSVKHV------MVTAFLLVCGAMTMSWICDTISESGFGQGSSL 321
V V+ SI ++ + +V+AF ++ G M + WI + I++ G G G SL
Sbjct: 118 VSVSVGL--RSISGGANGAIMIDMQVFMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISL 175
Query: 322 IICVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIV--TMWAVVVTE- 378
II GI++G + F + +L L+G+ IV T++A++ E
Sbjct: 176 IIFAGIVSGIPSAISG------TFNLVNTGVIN----ILMLIGIVLIVLATIFAIIYVEL 225
Query: 379 GCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPS-ILASI 437
R++ + Y A + + YIP +N SG+ P + + LL FPS IL
Sbjct: 226 AERRIPISY-----ARKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASALLVFPSTILQQA 280
Query: 438 LGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 497
+ Q + + L+P+ A + + + FF + ++ I K+IAD L + G I
Sbjct: 281 TSNKTLQAIADFLSPQGY--AYNILMFLLIIFFAYFYS--SIVFNSKDIADNLRRNGGYI 336
Query: 498 PNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIV 557
P ++PG+ T +L + + WG L L++++T IL ++ + F G T+VLI+V
Sbjct: 337 PGLRPGEGTSSFLNAVASKLTLWGSLYLALISTVPWIL---VKAMGVPFYFGGTAVLIVV 393
Query: 558 GSIIELRRSYQA 569
I+ + +A
Sbjct: 394 QVAIDTMKKIEA 405
>sp|P58118|SECY_LACLA Protein translocase subunit SecY OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=secY PE=3 SV=1
Length = 439
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 209/429 (48%), Gaps = 21/429 (4%)
Query: 149 ESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGFD-RRLIPQDYLSFVSGSVDELGDFGAE 207
E+F ++R R+ T ++ + R+G I +PG + + L L F++ + L A
Sbjct: 8 EAFKVKDVRARILFTIFILFVFRLGAHITVPGVNVQNLTEVSNLPFLN--MMNLVSGNAM 65
Query: 208 LKLSFFQLGISPQIVASILMQVL-CHIVPSLVQLRKEGLDGHEKIKSYIWWISLGFAILE 266
S F +G+SP I ASI++Q+L I+P V+ K+G G K+ +I+L A+ +
Sbjct: 66 QNYSLFAMGVSPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQ 125
Query: 267 AV-IVACYSLPYSIYAASHS--VKHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLII 323
++ I A + S+ + ++M+ A +L G+M ++W+ + I+E GFG G S+II
Sbjct: 126 SIGITAGFQAMSSLNIVQNPNWQSYLMIGA-ILTTGSMVVTWMGEQINEKGFGSGVSVII 184
Query: 324 CVGILTGYTETLYKMLSQLLVFKYTAGSSVRWWPFMLGLLGVFTIVTMWAVVVTEGCRKV 383
GI++ + + + + + + W F++GL+ I+ V + RKV
Sbjct: 185 FAGIVSSIPSAVKSVYDEKFLNVRPSEIPMSWL-FVIGLVLSAIIIIYVTTFVQQAERKV 243
Query: 384 KLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFW 443
+QY KL A S Y+P +NP+G+ PV+ + P+ + L
Sbjct: 244 PIQYT--KLTQGAPTSS-------YLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQG 294
Query: 444 QHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFD--IANLPKEIADYLNKMGARIPNVK 501
+V + + ++ W YA + LF F + P+++A+ L K G+ IP+V+
Sbjct: 295 SNVGWLSTLQDALSYTTWTGMLFYALLIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSVR 354
Query: 502 PGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGFSIGFTSVLIIVGSII 561
PGK T +Y++++ G L L +++ I + + + ++G TS+LI++ I
Sbjct: 355 PGKGTEKYVSRLLMRLATVGALFLGLISIIP-IAAQNVWGLPKIVALGGTSLLILIQVAI 413
Query: 562 ELRRSYQAY 570
+ + + Y
Sbjct: 414 QAVKQLEGY 422
>sp|P49461|SECY_ODOSI Protein translocase subunit SecY OS=Odontella sinensis GN=secY PE=3
SV=1
Length = 425
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 201/412 (48%), Gaps = 36/412 (8%)
Query: 171 RIGYFIPLPGFDR---RLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILM 227
R+G F+P+PG D + + + GD + + F L I P I ASI+M
Sbjct: 25 RMGTFLPVPGIDHGHLEFYIERHFRLRTLVSTFAGD--NTVVVGLFTLNIFPYINASIIM 82
Query: 228 QVLCHIVPSLVQLRKEG-LDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSV 286
Q+L ++P L +L+KEG + I S ++LG++++++ VA Y L +++ + +
Sbjct: 83 QLLVSLLPGLSKLQKEGGAEARRSINSLTRLLTLGWSLIQSTSVAFY-LKRALFEWNLVL 141
Query: 287 KHVMVTAFLLVCGAMTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLVFK 346
+V L GAM + W+ + I+E G G G SL+I I++ + +++++
Sbjct: 142 AFEIV--IWLTTGAMIVLWLSEIITEYGLGNGPSLLIYTNIVSSLPGFVKQVITE----- 194
Query: 347 YTAGSSVRWWPFMLGLLGVFTIVTMWAVVV-TEGCRKVKL-QYYGFKLASAAREDSPITE 404
+ V ++L G V ++ +V+ EG RKV L S S E
Sbjct: 195 --SSGKVPIGSWLLS--GFVLFVALYGIVLLQEGMRKVYLISSKQLNQTSLPFSGSSNLE 250
Query: 405 VEPYIPFNINPSGMQPVLTTTYLLAFPSILASILGSPFWQHVKEILNPETS----VGARP 460
YIP N +G+ P++ TT +L P+ + ++ + IL P + V +
Sbjct: 251 SGYYIPLRFNQAGVMPIILTTAVLVIPTFIYNL-------GLLRILTPLITLPVFVKSYK 303
Query: 461 WVYYTIYAFFVFLFNIF--DIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKIQASTR 518
+Y+ Y + LF++F I PK+++D L KM IP ++PG T YL ++
Sbjct: 304 IIYWVSYFVLILLFSLFYSTIVVNPKDLSDELQKMAVSIPGIRPGVETTFYLKQVMKRVT 363
Query: 519 FWGGLLLSILATSSTILDHYLRRINEGFS-IGFTSVLIIVGSIIELRRSYQA 569
G ++L++LAT I+ L GF+ +G TS+LI+VG I++L R ++
Sbjct: 364 LLGAIMLALLATLPNIIQAILSL--SGFTNLGTTSLLILVGVILDLTREMRS 413
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,351,862
Number of Sequences: 539616
Number of extensions: 8263680
Number of successful extensions: 25134
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 24608
Number of HSP's gapped (non-prelim): 136
length of query: 585
length of database: 191,569,459
effective HSP length: 123
effective length of query: 462
effective length of database: 125,196,691
effective search space: 57840871242
effective search space used: 57840871242
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)