Query         007923
Match_columns 585
No_of_seqs    824 out of 4527
Neff          8.9 
Searched_HMMs 46136
Date          Thu Mar 28 17:09:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007923hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PF12313 NPR1_like_C:  NPR1/NIM 100.0 4.5E-47 9.8E-52  335.0  12.8  203  371-573     4-207 (207)
  2 PHA02946 ankyin-like protein;  100.0 5.8E-40 1.3E-44  349.1  25.8  303  162-484    38-361 (446)
  3 PHA03095 ankyrin-like protein; 100.0   9E-39 1.9E-43  346.2  25.8  279  166-463    19-311 (471)
  4 PHA02876 ankyrin repeat protei 100.0 1.4E-38 3.1E-43  358.9  26.5  317  159-484    39-482 (682)
  5 PHA02716 CPXV016; CPX019; EVM0 100.0 1.4E-38 3.1E-43  348.3  23.9  294  171-473   152-567 (764)
  6 PHA02874 ankyrin repeat protei 100.0 4.2E-38   9E-43  336.7  26.5  277  164-463     4-310 (434)
  7 PHA02946 ankyin-like protein;  100.0 2.4E-38 5.2E-43  336.7  23.3  272  161-463    72-376 (446)
  8 KOG0510 Ankyrin repeat protein 100.0 1.5E-38 3.3E-43  333.2  19.5  287  162-472    89-403 (929)
  9 PHA03100 ankyrin repeat protei 100.0 1.1E-37 2.4E-42  338.5  23.6  251  162-442    36-307 (480)
 10 PHA02716 CPXV016; CPX019; EVM0 100.0 1.2E-37 2.6E-42  341.1  22.9  285  160-463   176-588 (764)
 11 PHA02876 ankyrin repeat protei 100.0 6.1E-37 1.3E-41  345.6  29.2  295  162-463   146-495 (682)
 12 PHA03095 ankyrin-like protein; 100.0 2.8E-37   6E-42  334.5  23.8  246  160-425    46-306 (471)
 13 PHA02874 ankyrin repeat protei 100.0   7E-37 1.5E-41  327.3  25.6  237  161-420    35-299 (434)
 14 PHA03100 ankyrin repeat protei 100.0 5.7E-37 1.2E-41  332.9  21.5  277  172-473    13-310 (480)
 15 PHA02989 ankyrin repeat protei 100.0 3.3E-36 7.2E-41  326.9  25.4  276  171-463    13-310 (494)
 16 PHA02878 ankyrin repeat protei 100.0 1.3E-35 2.9E-40  321.1  22.6  234  161-419    37-310 (477)
 17 KOG0510 Ankyrin repeat protein 100.0 4.1E-36 8.9E-41  315.0  17.5  266  162-448   122-416 (929)
 18 PHA02791 ankyrin-like protein; 100.0 1.4E-35   3E-40  294.8  20.4  216  170-413     8-230 (284)
 19 PHA02791 ankyrin-like protein; 100.0 1.9E-35 4.2E-40  293.7  20.3  197  161-365    30-231 (284)
 20 KOG4412 26S proteasome regulat 100.0 4.4E-36 9.5E-41  262.3  13.7  201  163-369     5-213 (226)
 21 PHA02875 ankyrin repeat protei 100.0 5.2E-35 1.1E-39  311.2  23.6  237  162-418     3-247 (413)
 22 KOG4412 26S proteasome regulat 100.0 6.1E-35 1.3E-39  255.2  15.9  190  207-418    16-213 (226)
 23 PHA02875 ankyrin repeat protei 100.0 4.9E-34 1.1E-38  303.7  23.2  236  194-450     2-246 (413)
 24 PHA02917 ankyrin-like protein; 100.0 1.2E-33 2.6E-38  311.9  26.6  312  162-485    33-492 (661)
 25 PHA02989 ankyrin repeat protei 100.0   7E-34 1.5E-38  308.7  22.2  242  162-425    36-305 (494)
 26 PHA02878 ankyrin repeat protei 100.0 1.2E-33 2.6E-38  305.9  23.6  250  188-462    31-321 (477)
 27 PHA02730 ankyrin-like protein; 100.0   1E-32 2.2E-37  296.9  25.8  298  161-463    41-519 (672)
 28 PHA02798 ankyrin-like protein; 100.0 3.7E-33   8E-38  302.7  22.5  239  167-426    44-308 (489)
 29 PHA02798 ankyrin-like protein; 100.0 3.8E-33 8.3E-38  302.6  21.6  272  174-463    18-312 (489)
 30 KOG4177 Ankyrin [Cell wall/mem 100.0 7.6E-34 1.6E-38  316.2  13.8  314  162-484   243-612 (1143)
 31 PHA02917 ankyrin-like protein; 100.0 2.4E-32 5.1E-37  301.6  24.4  297  163-463   105-507 (661)
 32 KOG4177 Ankyrin [Cell wall/mem 100.0 4.7E-33   1E-37  309.9   9.9  354   73-451   274-653 (1143)
 33 KOG0509 Ankyrin repeat and DHH 100.0 4.3E-32 9.3E-37  280.4  16.0  208  158-370    41-255 (600)
 34 PHA02730 ankyrin-like protein; 100.0 8.8E-31 1.9E-35  281.9  25.2  188  175-366    21-241 (672)
 35 KOG0509 Ankyrin repeat and DHH 100.0   4E-31 8.6E-36  273.3  19.2  203  196-419    46-255 (600)
 36 KOG0508 Ankyrin repeat protein 100.0 2.7E-30 5.9E-35  256.0  16.9  148  162-313    85-235 (615)
 37 PHA02795 ankyrin-like protein; 100.0 2.1E-29 4.6E-34  259.6  17.0  186  176-372    64-266 (437)
 38 PHA02792 ankyrin-like protein; 100.0 3.4E-29 7.4E-34  266.9  18.9  234  164-418    74-452 (631)
 39 PHA02792 ankyrin-like protein; 100.0 5.6E-28 1.2E-32  257.6  23.1  274  162-451    38-452 (631)
 40 PHA02859 ankyrin repeat protei 100.0 5.9E-28 1.3E-32  231.5  19.5  170  194-370    21-202 (209)
 41 PHA02795 ankyrin-like protein; 100.0 2.4E-27 5.2E-32  244.4  17.8  187  167-357    83-292 (437)
 42 PHA02859 ankyrin repeat protei  99.9 6.7E-27 1.5E-31  224.2  18.2  170  162-338    22-203 (209)
 43 KOG0508 Ankyrin repeat protein  99.9 1.2E-27 2.6E-32  237.3  12.0  208  167-380    10-235 (615)
 44 PLN03192 Voltage-dependent pot  99.9 2.3E-25 4.9E-30  255.2  22.2  175  191-370   522-699 (823)
 45 KOG0502 Integral membrane anky  99.9 5.2E-26 1.1E-30  205.0   8.9  232  194-447    62-296 (296)
 46 KOG4369 RTK signaling protein   99.9 1.9E-25 4.2E-30  238.9  10.6  281  162-463   758-1048(2131)
 47 TIGR00870 trp transient-recept  99.9 1.7E-24 3.8E-29  246.5  16.3  240  193-449    16-297 (743)
 48 TIGR00870 trp transient-recept  99.9   4E-24 8.7E-29  243.5  18.6  212  162-378    18-275 (743)
 49 KOG0502 Integral membrane anky  99.9 3.7E-25 7.9E-30  199.6   7.2  224  167-414    68-296 (296)
 50 KOG0507 CASK-interacting adapt  99.9   9E-24 1.9E-28  221.1  11.5  204  161-370    49-264 (854)
 51 PLN03192 Voltage-dependent pot  99.9 8.3E-23 1.8E-27  234.1  19.2  185  209-418   509-698 (823)
 52 KOG0514 Ankyrin repeat protein  99.9   2E-23 4.4E-28  201.5  11.1  152  220-376   261-423 (452)
 53 KOG0505 Myosin phosphatase, re  99.9 4.1E-23   9E-28  209.6  11.6  200  165-369    44-273 (527)
 54 PHA02743 Viral ankyrin protein  99.9 1.3E-22 2.8E-27  187.4  13.4  144  215-362     8-163 (166)
 55 KOG0507 CASK-interacting adapt  99.9 1.1E-22 2.3E-27  213.1  13.8  233  164-418     6-263 (854)
 56 KOG0505 Myosin phosphatase, re  99.9 1.2E-22 2.5E-27  206.3  11.0  215  201-437    47-291 (527)
 57 KOG4369 RTK signaling protein   99.9 3.1E-23 6.7E-28  222.2   6.2  282  162-462   791-1080(2131)
 58 PHA02743 Viral ankyrin protein  99.9 1.9E-21 4.1E-26  179.5  11.8  142  250-411     9-163 (166)
 59 PHA02741 hypothetical protein;  99.8 1.2E-20 2.6E-25  174.9  13.0  130  220-353    14-158 (169)
 60 PHA02736 Viral ankyrin protein  99.8 1.4E-20   3E-25  171.9   9.4  129  220-354    10-153 (154)
 61 KOG0512 Fetal globin-inducing   99.8 3.4E-20 7.4E-25  161.6  10.8  139  266-419    65-208 (228)
 62 PHA02741 hypothetical protein;  99.8 7.5E-20 1.6E-24  169.6  13.4  116  260-376    17-148 (169)
 63 KOG0514 Ankyrin repeat protein  99.8 3.4E-20 7.4E-25  179.3  10.4  161  186-349   260-429 (452)
 64 PHA02884 ankyrin repeat protei  99.8 1.2E-19 2.6E-24  180.6  14.3  152  187-351    25-186 (300)
 65 PHA02884 ankyrin repeat protei  99.8 2.7E-19 5.9E-24  178.1  14.1  147  162-316    34-185 (300)
 66 PHA02736 Viral ankyrin protein  99.8 6.4E-20 1.4E-24  167.5   7.6  116  260-378    13-144 (154)
 67 KOG0512 Fetal globin-inducing   99.8 3.5E-19 7.7E-24  155.3   9.8  146  295-456    65-212 (228)
 68 KOG0195 Integrin-linked kinase  99.8 4.6E-19 9.9E-24  166.3   8.9  119  247-369    20-142 (448)
 69 PF12796 Ank_2:  Ankyrin repeat  99.8 6.8E-18 1.5E-22  138.9  11.0   88  268-357     1-89  (89)
 70 KOG3676 Ca2+-permeable cation   99.7 4.2E-17 9.1E-22  173.8  10.4  110  292-418   183-317 (782)
 71 KOG0195 Integrin-linked kinase  99.7 4.3E-17 9.3E-22  153.1   8.6  136  215-355    22-161 (448)
 72 KOG3676 Ca2+-permeable cation   99.7 1.8E-16   4E-21  169.0  13.6  160  218-378   134-326 (782)
 73 cd00204 ANK ankyrin repeats;    99.7 1.8E-15   4E-20  131.7  13.6  117  225-346     5-125 (126)
 74 cd00204 ANK ankyrin repeats;    99.6 6.6E-15 1.4E-19  128.2  14.3  112  260-372     3-118 (126)
 75 KOG4214 Myotrophin and similar  99.6 4.2E-15 9.2E-20  116.3   8.5  100  266-366     4-106 (117)
 76 PF12796 Ank_2:  Ankyrin repeat  99.6 1.8E-14 3.9E-19  118.4   9.7   87  165-256     1-87  (89)
 77 COG0666 Arp FOG: Ankyrin repea  99.5 1.1E-13 2.4E-18  133.7  15.5  128  218-350    64-203 (235)
 78 PF13857 Ank_5:  Ankyrin repeat  99.5 7.5E-15 1.6E-19  108.9   4.8   56  312-367     1-56  (56)
 79 KOG4350 Uncharacterized conser  99.5 9.7E-15 2.1E-19  143.2   4.4   84   44-136    28-111 (620)
 80 COG0666 Arp FOG: Ankyrin repea  99.5 6.3E-13 1.4E-17  128.4  13.5  118  260-378    69-198 (235)
 81 PF13637 Ank_4:  Ankyrin repeat  99.4   4E-13 8.7E-18   99.0   6.4   54  293-347     1-54  (54)
 82 PTZ00322 6-phosphofructo-2-kin  99.4 1.6E-12 3.4E-17  145.4  11.9  103  266-369    84-197 (664)
 83 KOG4214 Myotrophin and similar  99.4 5.8E-13 1.3E-17  104.4   5.6  105  295-417     4-108 (117)
 84 KOG4591 Uncharacterized conser  99.4 2.6E-12 5.7E-17  114.7   9.2   84   41-135    47-132 (280)
 85 PHA02713 hypothetical protein;  99.3   3E-12 6.5E-17  140.4  10.6  107   40-178     5-113 (557)
 86 KOG1710 MYND Zn-finger and ank  99.3 7.3E-12 1.6E-16  118.2  11.4  114  264-378    12-130 (396)
 87 PTZ00322 6-phosphofructo-2-kin  99.3 2.3E-12   5E-17  144.0   9.4  113  295-417    84-196 (664)
 88 KOG0515 p53-interacting protei  99.3 4.1E-12 8.8E-17  128.7   8.1  100  268-368   554-658 (752)
 89 PF13857 Ank_5:  Ankyrin repeat  99.3 2.3E-12 5.1E-17   95.5   3.4   55  213-271     1-56  (56)
 90 PHA02790 Kelch-like protein; P  99.3 1.7E-11 3.7E-16  132.4   9.9  101   49-179    11-111 (480)
 91 KOG4441 Proteins containing BT  99.2 3.4E-11 7.3E-16  131.7  11.3  108   40-178    16-124 (571)
 92 PF13637 Ank_4:  Ankyrin repeat  99.2 1.4E-11 3.1E-16   90.7   5.4   54  227-284     1-54  (54)
 93 KOG1710 MYND Zn-finger and ank  99.2 7.2E-11 1.6E-15  111.6  10.5  114  228-346    13-131 (396)
 94 PF00651 BTB:  BTB/POZ domain;   99.2 6.1E-11 1.3E-15  101.6   9.0  105   51-182     1-105 (111)
 95 KOG0515 p53-interacting protei  99.1 1.8E-10   4E-15  116.9   8.7  108  203-314   559-673 (752)
 96 PHA03098 kelch-like protein; P  99.0 4.7E-10   1E-14  123.6   8.4   90   57-180     6-97  (534)
 97 PF13606 Ank_3:  Ankyrin repeat  98.9 3.2E-09   7E-14   67.3   4.0   30  326-355     1-30  (30)
 98 PF00023 Ank:  Ankyrin repeat H  98.8 6.3E-09 1.4E-13   67.9   4.3   33  326-358     1-33  (33)
 99 KOG0783 Uncharacterized conser  98.8 3.3E-09 7.1E-14  113.1   3.7   80  289-369    48-128 (1267)
100 smart00225 BTB Broad-Complex,   98.7 4.4E-08 9.6E-13   79.6   6.7   86   65-178     1-87  (90)
101 KOG0783 Uncharacterized conser  98.6 2.7E-08 5.9E-13  106.3   4.6   79  220-302    45-128 (1267)
102 KOG0818 GTPase-activating prot  98.6 1.4E-07   3E-12   95.7   8.1   90  260-350   123-223 (669)
103 KOG0818 GTPase-activating prot  98.6 2.2E-07 4.9E-12   94.2   9.4   87  288-375   122-215 (669)
104 KOG0506 Glutaminase (contains   98.6 5.3E-08 1.1E-12   98.3   4.5   85  291-376   504-589 (622)
105 PF13606 Ank_3:  Ankyrin repeat  98.5 1.2E-07 2.6E-12   60.0   3.7   30  292-322     1-30  (30)
106 KOG0506 Glutaminase (contains   98.5   1E-07 2.2E-12   96.3   5.1   91  260-350   502-596 (622)
107 PF00023 Ank:  Ankyrin repeat H  98.5 1.9E-07 4.1E-12   60.8   4.4   33  292-325     1-33  (33)
108 KOG2075 Topoisomerase TOP1-int  98.5 6.2E-07 1.4E-11   91.4   9.9   81   45-134    99-184 (521)
109 KOG0705 GTPase-activating prot  98.5 3.4E-07 7.4E-12   94.6   8.1   84  268-352   628-719 (749)
110 KOG0522 Ankyrin repeat protein  98.4 4.3E-07 9.3E-12   93.5   7.6   56  260-315    51-110 (560)
111 KOG0522 Ankyrin repeat protein  98.4 2.7E-07 5.8E-12   95.0   5.6   82  267-349    23-110 (560)
112 KOG0782 Predicted diacylglycer  98.4 9.3E-07   2E-11   91.0   9.2   83  289-371   895-978 (1004)
113 KOG0782 Predicted diacylglycer  98.2 2.8E-06 6.2E-11   87.5   8.2  100  182-285   887-988 (1004)
114 KOG0705 GTPase-activating prot  98.2 4.7E-06   1E-10   86.4   8.8   77  239-316   635-717 (749)
115 KOG0521 Putative GTPase activa  98.2 1.5E-06 3.3E-11   97.2   4.4   79  291-370   654-732 (785)
116 KOG0520 Uncharacterized conser  98.1 1.6E-06 3.5E-11   96.3   4.2  114  260-374   570-694 (975)
117 KOG3609 Receptor-activated Ca2  98.1 1.2E-05 2.6E-10   87.8   9.8  128  198-356    29-160 (822)
118 KOG0511 Ankyrin repeat protein  98.0 1.5E-05 3.3E-10   78.8   7.4   68  295-363    38-105 (516)
119 KOG2384 Major histocompatibili  98.0 6.5E-06 1.4E-10   74.1   4.4   60  318-377     3-63  (223)
120 KOG2838 Uncharacterized conser  98.0 6.5E-06 1.4E-10   77.8   4.6   82   45-135   115-198 (401)
121 KOG3609 Receptor-activated Ca2  98.0 2.6E-05 5.6E-10   85.2   9.4  116  165-288    29-155 (822)
122 KOG0521 Putative GTPase activa  97.8   2E-05 4.4E-10   88.4   5.4   85  318-418   645-731 (785)
123 KOG2384 Major histocompatibili  97.7 4.5E-05 9.8E-10   68.7   5.4   65  218-286     3-68  (223)
124 KOG0520 Uncharacterized conser  97.5 7.9E-05 1.7E-09   83.2   4.5  123  187-314   567-701 (975)
125 KOG0511 Ankyrin repeat protein  97.4 0.00048   1E-08   68.4   8.2   54  231-288    40-93  (516)
126 smart00248 ANK ankyrin repeats  97.1 0.00096 2.1E-08   40.6   4.1   29  326-354     1-29  (30)
127 KOG2505 Ankyrin repeat protein  96.6  0.0026 5.7E-08   65.6   4.6   62  306-368   404-471 (591)
128 KOG4682 Uncharacterized conser  96.4  0.0031 6.7E-08   63.5   4.0   82   50-138    59-141 (488)
129 smart00248 ANK ankyrin repeats  95.9   0.013 2.8E-07   35.3   3.8   24  293-316     2-25  (30)
130 KOG2505 Ankyrin repeat protein  95.8   0.014 3.1E-07   60.3   5.6   68  276-347   403-480 (591)
131 KOG2838 Uncharacterized conser  95.6  0.0096 2.1E-07   56.8   3.3   86   44-135   219-328 (401)
132 PF06128 Shigella_OspC:  Shigel  95.4   0.086 1.9E-06   49.4   8.5   88  265-352   180-279 (284)
133 PF06128 Shigella_OspC:  Shigel  93.3    0.52 1.1E-05   44.4   8.7   49  241-289   230-279 (284)
134 PF03158 DUF249:  Multigene fam  89.8     2.9 6.2E-05   38.4   9.3   46  296-348   146-191 (192)
135 PF11929 DUF3447:  Domain of un  86.3     1.8 3.9E-05   33.8   5.3   48  266-316     8-55  (76)
136 PF03158 DUF249:  Multigene fam  83.9      18 0.00039   33.3  11.0  138  162-314    47-191 (192)
137 PF03931 Skp1_POZ:  Skp1 family  83.1     3.7 8.1E-05   30.6   5.5   57   66-130     3-59  (62)
138 PF11929 DUF3447:  Domain of un  74.7     6.1 0.00013   30.8   4.6   48  294-349     7-54  (76)
139 KOG2714 SETA binding protein S  73.0      15 0.00033   38.2   7.9   90   66-181    13-105 (465)
140 smart00512 Skp1 Found in Skp1   63.6      20 0.00044   29.7   5.8   62   66-132     4-65  (104)
141 KOG2716 Polymerase delta-inter  54.7      48   0.001   31.9   7.2   94   66-183     7-100 (230)
142 PF02214 BTB_2:  BTB/POZ domain  52.7      12 0.00025   30.4   2.4   65   66-134     1-67  (94)
143 PF12313 NPR1_like_C:  NPR1/NIM  51.5      13 0.00029   34.3   2.7   37  485-521    51-87  (207)
144 KOG0292 Vesicle coat complex C  38.0      45 0.00097   38.1   4.7   46  294-349   731-778 (1202)
145 KOG1595 CCCH-type Zn-finger pr  33.3     9.9 0.00021   40.6  -1.1   86  263-351    57-156 (528)
146 KOG1987 Speckle-type POZ prote  30.5      13 0.00028   37.4  -0.8   55   73-132   109-163 (297)
147 PF04508 Pox_A_type_inc:  Viral  29.0      81  0.0018   18.5   2.6   19  536-554     3-21  (23)
148 KOG3836 HLH transcription fact  26.6      16 0.00035   39.7  -0.9   61  301-362   404-464 (605)
149 KOG2077 JNK/SAPK-associated pr  25.4      89  0.0019   33.9   4.1   16  535-550   407-422 (832)
150 KOG0513 Ca2+-independent phosp  25.2      14 0.00031   40.0  -1.7   79  291-373   104-182 (503)
151 KOG0513 Ca2+-independent phosp  24.2      15 0.00033   39.7  -1.6   99  261-372   103-205 (503)
152 KOG4591 Uncharacterized conser  20.6      68  0.0015   29.9   2.0   40  329-368   224-268 (280)
153 PF11822 DUF3342:  Domain of un  20.5 4.5E+02  0.0096   26.8   7.8   70   66-140     1-77  (317)

No 1  
>PF12313 NPR1_like_C:  NPR1/NIM1 like defence protein C terminal;  InterPro: IPR021094  This entry represents the NPR1/NIM1 like defence protein, which is found in many plant species []. The eukaryotic proteins are typically between 251 and 588 amino acids in length. NPR1/NIM1 like defence protein mediates the binding of TGA factors to the as-1 motif, found in the pathogenesis-related PR-1 gene which leads to the transcriptional regulation of the gene defence. Controls the onset of systemic acquired resistance (SAR) [].
Probab=100.00  E-value=4.5e-47  Score=334.96  Aligned_cols=203  Identities=64%  Similarity=0.938  Sum_probs=192.4

Q ss_pred             CCCCcccccCcCCCCCcccchHHHHHHhhh-hcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHh
Q 007923          371 TKAADYYIPTEEGKTTPKDRLCIEILEQAE-RRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIV  449 (585)
Q Consensus       371 ~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~-~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A  449 (585)
                      .+..+++...+.|+...+++.|+++|++.. ..|+.-.+...++++++++++|+++|++|+++++++|++.+++.+|+||
T Consensus         4 Tr~~Dy~~~te~gkes~KdrLCIeILEq~~~rr~p~~~eas~s~~~~~ddL~mrLLyLENRValARllFP~EAkvaMdIA   83 (207)
T PF12313_consen    4 TRAKDYNKKTEQGKESNKDRLCIEILEQEERRRNPMPGEASVSSPMAADDLHMRLLYLENRVALARLLFPMEAKVAMDIA   83 (207)
T ss_pred             CchhhhccchhhccccccCcchHHHHHHHHHhcCCCccccccccccchHhhhhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            345678889999999999999999999999 7999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCccccccccccccccCcCCccccCCCCcccchHhHHHHHHHHHHHHhhCcccCCcchHHHHHHhccCCcccccCCC
Q 007923          450 HLDGTLEFALDGIKTKKMAGAQRTTVDLNEAPFKMQEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADDLNQLACPG  529 (585)
Q Consensus       450 ~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~p~~~~~~~~~~~~aL~~~ve~g~~~~p~~~~~l~~~~~~~~~~~~~~~~  529 (585)
                      ..+|+.|++.....+....+++++.+|+|++|+.+.+++++|+.||+|+||+||||||+||+||++||++|+++++++++
T Consensus        84 ~~d~T~Eft~~s~~~~~~~~~~~~~vDLNetP~~~~~~l~~Rl~AL~KTVElGrRfFP~CSeVLdK~md~ddl~dl~~le  163 (207)
T PF12313_consen   84 QADGTSEFTGLSASPSKGSGGNRSEVDLNETPFKQNERLLSRLRALSKTVELGRRFFPRCSEVLDKIMDDDDLPDLAYLE  163 (207)
T ss_pred             ccCccccccccccccccCCccccCcCccccCcHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHhccCcchhhhhcc
Confidence            99999999998763345688999999999999999999999999999999999999999999999999888899999999


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhhHhhhhcccccccCCCC
Q 007923          530 NDTPEERLLKRIRYMELQEVVSKAFNEDKEEFDRSAISSSSSSK  573 (585)
Q Consensus       530 ~~~~e~~~~k~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  573 (585)
                      .||||+|++||+||+|||++|+|||+|||||+++|++||||||+
T Consensus       164 ~~t~eeq~~Kr~Rf~ELke~v~kAFskDkeE~~~s~~ssSsSss  207 (207)
T PF12313_consen  164 KGTPEEQLVKRMRFMELKEDVQKAFSKDKEEFDRSSLSSSSSSS  207 (207)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcccccCcCCCCC
Confidence            99999999999999999999999999999999999999988774


No 2  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=5.8e-40  Score=349.10  Aligned_cols=303  Identities=12%  Similarity=0.042  Sum_probs=239.2

Q ss_pred             hhHHHHHH--hcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccC-
Q 007923          162 VEVLYVSF--AFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQH-  238 (585)
Q Consensus       162 ~t~L~~A~--~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~-  238 (585)
                      .++||.++  .....+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+++|.+|..|.||||+|+... 
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~  117 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD  117 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC
Confidence            35788765  344678999999999999999999999999999999999999999999999999999999999988632 


Q ss_pred             CHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCC--HHHHHHH
Q 007923          239 IVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCD--AKTTTEL  312 (585)
Q Consensus       239 ~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~--~~~v~~L  312 (585)
                      ...+++++|+++|++++..  .|..|.|||| |+..|+.+++++|++.|+    .|..|+||||+|+..++  .+++++|
T Consensus       118 ~~~e~v~lLl~~Gadin~~--~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~L  194 (446)
T PHA02946        118 EVIERINLLVQYGAKINNS--VDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM  194 (446)
T ss_pred             chHHHHHHHHHcCCCcccc--cCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHH
Confidence            3589999999999999951  5889999998 666799999999999993    67899999999987654  6899999


Q ss_pred             HhhCCCCcccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC-CcccccCcCCCCCccc
Q 007923          313 LDLGLADVNHRNSRGYTVLHVAAMRK--EPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA-ADYYIPTEEGKTTPKD  389 (585)
Q Consensus       313 L~~~~advn~~d~~G~TpLh~Aa~~g--~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~-~~~~~~~~~g~t~~~~  389 (585)
                      ++.| +++|.+|.+|+||||+|+..|  +.+++++|++ |+++|.+|.+|+||||+|++.++. ..+..+...|......
T Consensus       195 l~~G-adin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~  272 (446)
T PHA02946        195 MKLG-ISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQ  272 (446)
T ss_pred             HHcC-CCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCc
Confidence            9987 999999999999999999986  8899999995 999999999999999999998764 3333333333211100


Q ss_pred             c--h-----HHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhc--CCCCCchhhHHhhhcCCcccccc
Q 007923          390 R--L-----CIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLL--FPMEAKVIMDIVHLDGTLEFALD  460 (585)
Q Consensus       390 ~--~-----~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L--~~~~g~t~l~~A~~~~~~~~~~~  460 (585)
                      .  .     ..++++.....+  +..|.||||+|+.         .++.+++++|  .+..|+||||+|+..++.+++.+
T Consensus       273 ~~~~a~~~~~~~~~e~l~~~g--~~~~~TpLh~Aa~---------~g~~eivk~Ll~~~~~~~t~L~~A~~~~~~~~v~~  341 (446)
T PHA02946        273 TVNICIFYDRDDVLEIINDKG--KQYDSTDFKMAVE---------VGSIRCVKYLLDNDIICEDAMYYAVLSEYETMVDY  341 (446)
T ss_pred             HHHHHHHcCchHHHHHHHHcC--cccCCCHHHHHHH---------cCCHHHHHHHHHCCCccccHHHHHHHhCHHHHHHH
Confidence            0  0     001111111111  2357899999998         4455555555  23578999999999999999999


Q ss_pred             ccccccccCcCCccccCCCCcccc
Q 007923          461 GIKTKKMAGAQRTTVDLNEAPFKM  484 (585)
Q Consensus       461 l~~~~~~~~~~~~~~d~~~~p~~~  484 (585)
                      +..    .|++....+-..||+..
T Consensus       342 Ll~----~ga~~n~~~~G~t~l~~  361 (446)
T PHA02946        342 LLF----NHFSVDSVVNGHTCMSE  361 (446)
T ss_pred             HHH----CCCCCCCccccccHHHH
Confidence            887    66666554445666653


No 3  
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=9e-39  Score=346.18  Aligned_cols=279  Identities=14%  Similarity=0.087  Sum_probs=213.7

Q ss_pred             HHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHh---hHHHHHHHHhcCCCccccCCCChhHHhhhcccCC-HH
Q 007923          166 YVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHM---CGKACEKLLERCIEITVKSDIDIVTLDKTLPQHI-VK  241 (585)
Q Consensus       166 ~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~---~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~-~~  241 (585)
                      ..++..+..+++++|+++|++++.++..|.||+++++..+   +.+++++|+++|+++|.++..|.||||+|+. .+ ..
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~-~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLY-NATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCCcH
Confidence            4455666777888888888888888888888888888777   7888888888888888888888888888888 45 57


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCChHHHHHH--hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcC--CHHHHHHHH
Q 007923          242 QIIDLRVELSLHRSESCGFPDKHTKRIHRAL--DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYC--DAKTTTELL  313 (585)
Q Consensus       242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g--~~~~v~~LL  313 (585)
                      +++++|+++|++++.   ++..|.||||+|+  ..++.+++++|++.|+    .|..|.||||+|+..+  +.++++.|+
T Consensus        98 ~iv~lLl~~ga~in~---~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll  174 (471)
T PHA03095         98 DVIKLLIKAGADVNA---KDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLI  174 (471)
T ss_pred             HHHHHHHHcCCCCCC---CCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            888888888888888   7778888888888  4567788888888873    5677888888877765  567788888


Q ss_pred             hhCCCCcccCCCCCChHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccch
Q 007923          314 DLGLADVNHRNSRGYTVLHVAAMR--KEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRL  391 (585)
Q Consensus       314 ~~~~advn~~d~~G~TpLh~Aa~~--g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~  391 (585)
                      +.| ++++..|..|+||||+|+..  ++.++++.|+++|++++.+|..|+||||+|+..++....              .
T Consensus       175 ~~g-~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~--------------~  239 (471)
T PHA03095        175 DAG-ADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRS--------------L  239 (471)
T ss_pred             HcC-CCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHH--------------H
Confidence            776 88887888888888887754  667788888888888888888888888888876543211              1


Q ss_pred             HHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923          392 CIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       392 ~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                      ...+++.+.++|.+|..|.||||+|+..++..++.+.-..+......+..|+||||+|+..++.+++.+++.
T Consensus       240 v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~  311 (471)
T PHA03095        240 VLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALA  311 (471)
T ss_pred             HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence            223567777888888888888888888777777766666677777778888888888888888877776665


No 4  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.4e-38  Score=358.85  Aligned_cols=317  Identities=14%  Similarity=0.094  Sum_probs=254.5

Q ss_pred             chhhhHHHHHHhcChhHHHHHHHhhccc-cccccccCChHHHHHH-----------------------------------
Q 007923          159 DFMVEVLYVSFAFQVPELVALYQRHLLD-ILDKVVADDILVVLSV-----------------------------------  202 (585)
Q Consensus       159 df~~t~L~~A~~~~~~elv~~ll~~g~~-~~~~~~~~~t~l~l~~-----------------------------------  202 (585)
                      .|..||||.|+.+|+.++|+.|++...+ ++..+..|.||+|+++                                   
T Consensus        39 ~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  118 (682)
T PHA02876         39 SIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLD  118 (682)
T ss_pred             cccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHH
Confidence            3558999999999999999999998776 4566778999888544                                   


Q ss_pred             -----------------------------------HHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHH
Q 007923          203 -----------------------------------AHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLR  247 (585)
Q Consensus       203 -----------------------------------a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~L  247 (585)
                                                         ..++.+++++|+++|+++|.+|..|+||||+|+. .|+.+++++|
T Consensus       119 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~-~G~~~iv~~L  197 (682)
T PHA02876        119 EACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAE-RGNAKMVNLL  197 (682)
T ss_pred             HHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH-CCCHHHHHHH
Confidence                                               2236778999999999999999999999999999 7999999999


Q ss_pred             HHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC---------------------------------CCCCCc
Q 007923          248 VELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH---------------------------------TNLDDA  294 (585)
Q Consensus       248 l~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~---------------------------------~d~~g~  294 (585)
                      +++|++++.   .+..|.||||+|+..|+.+++++|++.+.                                 .|..|+
T Consensus       198 L~~Gad~n~---~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~  274 (682)
T PHA02876        198 LSYGADVNI---IALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKN  274 (682)
T ss_pred             HHCCCCcCc---cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            999999999   89999999999999999988887776541                                 245688


Q ss_pred             hHHHHHHHcCCH-HHHHHHHhhCCCCcccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc--
Q 007923          295 HALHYAVAYCDA-KTTTELLDLGLADVNHRNSRGYTVLHVAAMRK-EPKIIVSLLTKGARPSDLTLDGRKALQISKRL--  370 (585)
Q Consensus       295 tpLh~A~~~g~~-~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g-~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~--  370 (585)
                      ||||+|+..|+. ++++.|++.| +++|.+|..|+||||+|+..| +.+++++|+..|++++.+|..|+||||+|+..  
T Consensus       275 TpLh~Aa~~~~~~~iv~lLl~~g-adin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~  353 (682)
T PHA02876        275 TPLHHASQAPSLSRLVPKLLERG-ADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDR  353 (682)
T ss_pred             CHHHHHHhCCCHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCC
Confidence            999999998886 5777777776 999999999999999999988 58899999999999999999999999999875  


Q ss_pred             ---------CCCCcccccCcCCCCCcc-------cchHHHHHHhhhhcCCcccCCCCHHHHHHhhhh-hHHHHHHhhhhh
Q 007923          371 ---------TKAADYYIPTEEGKTTPK-------DRLCIEILEQAERRDPLLREASHSFAMAGDDLR-MKLLYLENRVGL  433 (585)
Q Consensus       371 ---------~~~~~~~~~~~~g~t~~~-------~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~-~~~l~l~~~~~~  433 (585)
                               .++++++..+..|.||+.       ...+..|++.+++++..+..|.||||+|+..+. ..++.+....++
T Consensus       354 ~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ga  433 (682)
T PHA02876        354 NKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGA  433 (682)
T ss_pred             cHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCC
Confidence                     347788888888888831       122335577888888888888899998875333 333444445556


Q ss_pred             hhhcCCCCCchhhHHhhhcC-CccccccccccccccCcCCccccC-CCCcccc
Q 007923          434 AKLLFPMEAKVIMDIVHLDG-TLEFALDGIKTKKMAGAQRTTVDL-NEAPFKM  484 (585)
Q Consensus       434 ~~~L~~~~g~t~l~~A~~~~-~~~~~~~l~~~~~~~~~~~~~~d~-~~~p~~~  484 (585)
                      .....+..|+||||+|+..+ ..+++.++..    .|++....+. +.+|+..
T Consensus       434 din~~d~~G~TpLh~Aa~~~~~~~iv~lLl~----~Gad~n~~d~~g~tpl~~  482 (682)
T PHA02876        434 NVNSKNKDLSTPLHYACKKNCKLDVIEMLLD----NGADVNAINIQNQYPLLI  482 (682)
T ss_pred             CCCcCCCCCChHHHHHHHhCCcHHHHHHHHH----CCCCCCCCCCCCCCHHHH
Confidence            66678899999999998766 5688888876    6666655443 3566654


No 5  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.4e-38  Score=348.35  Aligned_cols=294  Identities=11%  Similarity=-0.004  Sum_probs=230.0

Q ss_pred             cChhHHHHHHHhhc-cccccc-cccCChHHHHHHHH--hhHHHHHHHHhcCCCccccCCCChhHHhhhcccCC--HHHHH
Q 007923          171 FQVPELVALYQRHL-LDILDK-VVADDILVVLSVAH--MCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHI--VKQII  244 (585)
Q Consensus       171 ~~~~elv~~ll~~g-~~~~~~-~~~~~t~l~l~~a~--~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~--~~~i~  244 (585)
                      .+..+++++|+++| ++++.+ +..|.||+|.++..  ++.+++++|+++|+++|.+|..|.||||+|+. .+  ..+++
T Consensus       152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~-~g~~~~eIV  230 (764)
T PHA02716        152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLI-TGNVCASVI  230 (764)
T ss_pred             CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-cCCCCHHHH
Confidence            47778999999999 999998 88899988876543  36789999999999999999999999999998 45  35899


Q ss_pred             HHHHHcCCCCCCCCCCCCCCChHHHHH-------------------------------------HhCCCHHHHHHHHhCC
Q 007923          245 DLRVELSLHRSESCGFPDKHTKRIHRA-------------------------------------LDSDDVELVRMLLKEA  287 (585)
Q Consensus       245 ~~Ll~~ga~in~~~~~d~~g~t~Lh~A-------------------------------------~~~g~~~~v~~Ll~~g  287 (585)
                      ++|+++|+++|.   +|..|+||||+|                                     +..|+.+++++|+++|
T Consensus       231 klLLe~GADVN~---kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G  307 (764)
T PHA02716        231 KKIIELGGDMDM---KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG  307 (764)
T ss_pred             HHHHHcCCCCCC---CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence            999999999999   899999999975                                     4457889999999999


Q ss_pred             C----CCCCCchHHHHHHH--cCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH--------------cCCHHHHHHHH
Q 007923          288 H----TNLDDAHALHYAVA--YCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM--------------RKEPKIIVSLL  347 (585)
Q Consensus       288 ~----~d~~g~tpLh~A~~--~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~--------------~g~~~iv~~Ll  347 (585)
                      +    .|..|+||||+|+.  .++.+++++|++.| +++|.+|..|+||||+|+.              .++.+++++|+
T Consensus       308 AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G-ADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL  386 (764)
T PHA02716        308 VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYG-NDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLI  386 (764)
T ss_pred             CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcC-CCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHH
Confidence            4    67889999999874  46789999999887 9999999999999999875              37899999999


Q ss_pred             HcCCCCCCCCCCCCCHHHHHH-H---cCCCCcccccC------------------cCCCCCc------------------
Q 007923          348 TKGARPSDLTLDGRKALQISK-R---LTKAADYYIPT------------------EEGKTTP------------------  387 (585)
Q Consensus       348 ~~gad~~~~d~~G~TpL~~A~-~---~~~~~~~~~~~------------------~~g~t~~------------------  387 (585)
                      ++|||++.+|..|+||||.++ .   .++...++.+.                  ..+.++.                  
T Consensus       387 ~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~  466 (764)
T PHA02716        387 SLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTD  466 (764)
T ss_pred             HCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhh
Confidence            999999999999999999422 1   12211111111                  1111110                  


Q ss_pred             --------ccchHHH-HHHhhhhcCCcccCCCCHHHHHHhhhhhH-----HHHHHhhhhhhhhcCCCCCchhhHHhhhcC
Q 007923          388 --------KDRLCIE-ILEQAERRDPLLREASHSFAMAGDDLRMK-----LLYLENRVGLAKLLFPMEAKVIMDIVHLDG  453 (585)
Q Consensus       388 --------~~~~~~~-ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~-----~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~  453 (585)
                              ....... ++..+.++|..|..|+||||+|+..++..     .+.++-..++.....+++|+||||+|...|
T Consensus       467 ~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        467 EYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             hhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Confidence                    0000011 12345577888999999999999876653     335566777778889999999999999999


Q ss_pred             Cc-----cccccccccccccCcCCc
Q 007923          454 TL-----EFALDGIKTKKMAGAQRT  473 (585)
Q Consensus       454 ~~-----~~~~~l~~~~~~~~~~~~  473 (585)
                      +.     +++.+++.    .+++..
T Consensus       547 ~~~~~~~eIvk~LL~----~ga~~~  567 (764)
T PHA02716        547 RLSGHQWYIVKNILD----KRPNVD  567 (764)
T ss_pred             CccccHHHHHHHHHh----cCCCcc
Confidence            76     77777776    455444


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.2e-38  Score=336.74  Aligned_cols=277  Identities=15%  Similarity=0.061  Sum_probs=221.2

Q ss_pred             HHHHHHhcChhHHHHHHHhh-ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHH
Q 007923          164 VLYVSFAFQVPELVALYQRH-LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQ  242 (585)
Q Consensus       164 ~L~~A~~~~~~elv~~ll~~-g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~  242 (585)
                      .|..|+..|..++++.|++. +..++..+..+.||++.|+..++.+++++|+++|+++|..+..|.||||.|+. .++.+
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~-~~~~~   82 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIK-IGAHD   82 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCCHH
Confidence            35666666666666666643 34455556666666666666667777777777777776666666777777666 56666


Q ss_pred             HHHHHHHcC-----------------------CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCch
Q 007923          243 IIDLRVELS-----------------------LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAH  295 (585)
Q Consensus       243 i~~~Ll~~g-----------------------a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~t  295 (585)
                      ++++|+++|                       ++++.   ++..|.||||+|+..|+.++|++|++.|+    .|..|.|
T Consensus        83 iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~---~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~t  159 (434)
T PHA02874         83 IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNI---KDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCY  159 (434)
T ss_pred             HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCC---CCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCC
Confidence            666666554                       56666   78899999999999999999999999993    5688999


Q ss_pred             HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCc
Q 007923          296 ALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAAD  375 (585)
Q Consensus       296 pLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~  375 (585)
                      |||+|+..|+.+++++|++.| ++++..|..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..++.  
T Consensus       160 pLh~A~~~~~~~iv~~Ll~~g-~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~--  236 (434)
T PHA02874        160 PIHIAIKHNFFDIIKLLLEKG-AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS--  236 (434)
T ss_pred             HHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChH--
Confidence            999999999999999999998 99999999999999999999999999999999999999999999999999985431  


Q ss_pred             ccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh-hhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcC-
Q 007923          376 YYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL-RMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDG-  453 (585)
Q Consensus       376 ~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~-~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~-  453 (585)
                                      .+.+|..+.+++.+|..|.||||+|+..+ ...++.+....++.....+..|+||||+|...+ 
T Consensus       237 ----------------~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~  300 (434)
T PHA02874        237 ----------------AIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYIN  300 (434)
T ss_pred             ----------------HHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCC
Confidence                            23456678899999999999999999754 567777777777777889999999999998766 


Q ss_pred             Cccccccccc
Q 007923          454 TLEFALDGIK  463 (585)
Q Consensus       454 ~~~~~~~l~~  463 (585)
                      ..++...+..
T Consensus       301 ~~~~ik~ll~  310 (434)
T PHA02874        301 KDPVIKDIIA  310 (434)
T ss_pred             ccHHHHHHHH
Confidence            4444444443


No 7  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.4e-38  Score=336.74  Aligned_cols=272  Identities=12%  Similarity=0.029  Sum_probs=230.6

Q ss_pred             hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHh--hHHHHHHHHhcCCCccc-cCCCChhHHhhhccc
Q 007923          161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHM--CGKACEKLLERCIEITV-KSDIDIVTLDKTLPQ  237 (585)
Q Consensus       161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~--~~~~~~~Ll~~g~din~-~d~~g~t~L~~A~~~  237 (585)
                      ..||||+|+..+..+++++|+++|++++.++..|.||+++|++.+  ..+++++|+++|+++|. .|..|.|||| |+. 
T Consensus        72 G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~-  149 (446)
T PHA02946         72 GNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACT-  149 (446)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHH-
Confidence            379999999999999999999999999999999999999888766  47899999999999995 6889999998 555 


Q ss_pred             CCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCC--CHHHHHHHHhCCC----CCCCCchHHHHHHHcC--CHHHH
Q 007923          238 HIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSD--DVELVRMLLKEAH----TNLDDAHALHYAVAYC--DAKTT  309 (585)
Q Consensus       238 ~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g--~~~~v  309 (585)
                      .+..+++++|+++|++++.   +|..|+||||+|+..+  +.+++++|++.|+    .|.+|+||||+|+..|  +.+++
T Consensus       150 ~~~~~vv~~Ll~~gad~~~---~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv  226 (446)
T PHA02946        150 DPSERVFKKIMSIGFEARI---VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDII  226 (446)
T ss_pred             CCChHHHHHHHhccccccc---cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHH
Confidence            5789999999999999999   9999999999998754  5799999999993    5789999999999986  78899


Q ss_pred             HHHHhhCCCCcccCCCCCChHHHHHHHcCC-HHHHHHHHHcCCCCCC--------------------C-CCCCCCHHHHH
Q 007923          310 TELLDLGLADVNHRNSRGYTVLHVAAMRKE-PKIIVSLLTKGARPSD--------------------L-TLDGRKALQIS  367 (585)
Q Consensus       310 ~~LL~~~~advn~~d~~G~TpLh~Aa~~g~-~~iv~~Ll~~gad~~~--------------------~-d~~G~TpL~~A  367 (585)
                      ++|+. + +++|.+|..|+||||+|+..++ .+++++|+++|++++.                    . +..|.||||+|
T Consensus       227 ~lLl~-g-adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~A  304 (446)
T PHA02946        227 NLLLP-S-TDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMA  304 (446)
T ss_pred             HHHHc-C-CCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHH
Confidence            98884 5 9999999999999999999988 4899999999986432                    1 13577899988


Q ss_pred             HHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhH
Q 007923          368 KRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMD  447 (585)
Q Consensus       368 ~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~  447 (585)
                      +..|+...+..                ||+.+       ..|.||||+|+..++.+++.+.-..++..... ..|.||||
T Consensus       305 a~~g~~eivk~----------------Ll~~~-------~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~  360 (446)
T PHA02946        305 VEVGSIRCVKY----------------LLDND-------IICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMS  360 (446)
T ss_pred             HHcCCHHHHHH----------------HHHCC-------CccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHH
Confidence            88877665543                45443       35799999999977777666655555544443 58999999


Q ss_pred             HhhhcCCccccccccc
Q 007923          448 IVHLDGTLEFALDGIK  463 (585)
Q Consensus       448 ~A~~~~~~~~~~~l~~  463 (585)
                      +|...++.+++..++.
T Consensus       361 ~a~~~~~~~~~~~ll~  376 (446)
T PHA02946        361 ECVRLNNPVILSKLML  376 (446)
T ss_pred             HHHHcCCHHHHHHHHh
Confidence            9999999999988876


No 8  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.5e-38  Score=333.22  Aligned_cols=287  Identities=16%  Similarity=0.119  Sum_probs=259.3

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .||||+|+.+...+.+++|++.|+++...+..+.+|+|+|+..++.+..+.|+++|+|+|..|..|.||||+|+. +++.
T Consensus        89 n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~-~~~~  167 (929)
T KOG0510|consen   89 NTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAAR-KNKV  167 (929)
T ss_pred             CchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHh-cChH
Confidence            789999999999999999999999999999999999999999999999999999999999999999999999999 7999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhC-C-----C---CCCCCchHHHHHHHcCCHHHHHHH
Q 007923          242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKE-A-----H---TNLDDAHALHYAVAYCDAKTTTEL  312 (585)
Q Consensus       242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g-----~---~d~~g~tpLh~A~~~g~~~~v~~L  312 (585)
                      |+.+.|++.|+++..   .|.+|.+|+|.|+..|..++.+..+.+ |     +   .|..|.||||.|+..|+.++++..
T Consensus       168 E~~k~Li~~~a~~~K---~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~  244 (929)
T KOG0510|consen  168 EAKKELINKGADPCK---SDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMC  244 (929)
T ss_pred             HHHHHHHhcCCCCCc---ccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHH
Confidence            999999999999999   899999999999999999999999982 2     1   457889999999999999999999


Q ss_pred             HhhCCCC--------------cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          313 LDLGLAD--------------VNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       313 L~~~~ad--------------vn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      |+.+..+              ||..|++|.||||+||..|++++++.|+..||+++.++.++.||||.|+++|+...+  
T Consensus       245 L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv--  322 (929)
T KOG0510|consen  245 LQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTV--  322 (929)
T ss_pred             HhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHH--
Confidence            9986432              456799999999999999999999999999999999999999999999998876544  


Q ss_pred             cCcCCCCCcccchHHHHHH-hhh-hcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhh---cCCCCCchhhHHhhhcC
Q 007923          379 PTEEGKTTPKDRLCIEILE-QAE-RRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKL---LFPMEAKVIMDIVHLDG  453 (585)
Q Consensus       379 ~~~~g~t~~~~~~~~~ll~-~~~-~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~---L~~~~g~t~l~~A~~~~  453 (585)
                                    ..||+ .+. ..|..|..|.||||+|++.+|-++++++-+.+....   -.|.+|.||||.|+..|
T Consensus       323 --------------~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g  388 (929)
T KOG0510|consen  323 --------------ERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYG  388 (929)
T ss_pred             --------------HHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhc
Confidence                          34666 332 567788899999999999999999999877776665   34999999999999999


Q ss_pred             CccccccccccccccCcCC
Q 007923          454 TLEFALDGIKTKKMAGAQR  472 (585)
Q Consensus       454 ~~~~~~~l~~~~~~~~~~~  472 (585)
                      +...+..+..    .|++.
T Consensus       389 ~~~av~~Li~----~Ga~I  403 (929)
T KOG0510|consen  389 NTSAVQKLIS----HGADI  403 (929)
T ss_pred             cHHHHHHHHH----cCCce
Confidence            9999999988    56654


No 9  
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-37  Score=338.49  Aligned_cols=251  Identities=18%  Similarity=0.165  Sum_probs=233.0

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHH-----HHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhc-
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVL-----SVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTL-  235 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l-----~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~-  235 (585)
                      .||||+|+..+..+++++|+++|++++..+..+.+|+++     |+..++.+++++|+++|++++..|..|.||||+|+ 
T Consensus        36 ~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~  115 (480)
T PHA03100         36 VLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAIS  115 (480)
T ss_pred             chhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHh
Confidence            789999999999999999999999999999999999999     99999999999999999999999999999999999 


Q ss_pred             -ccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCC--CHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHH
Q 007923          236 -PQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSD--DVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKT  308 (585)
Q Consensus       236 -~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~  308 (585)
                       . .++.+++++|+++|++++.   .+..|.||||+|+..|  +.+++++|+++|+    .|..|.||||+|+..|+.++
T Consensus       116 ~~-~~~~~iv~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~i  191 (480)
T PHA03100        116 KK-SNSYSIVEYLLDNGANVNI---KNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDV  191 (480)
T ss_pred             cc-cChHHHHHHHHHcCCCCCc---cCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHH
Confidence             8 7999999999999999999   8999999999999999  9999999999993    56789999999999999999


Q ss_pred             HHHHHhhCCCCcccCCCCC------ChHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccC
Q 007923          309 TTELLDLGLADVNHRNSRG------YTVLHVAAMRKE--PKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPT  380 (585)
Q Consensus       309 v~~LL~~~~advn~~d~~G------~TpLh~Aa~~g~--~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~  380 (585)
                      +++|++.| ++++..+..|      .||||+|+..|+  .+++++|+++|++++.+|..|+||||+|+..++...+..  
T Consensus       192 v~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~--  268 (480)
T PHA03100        192 IKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKY--  268 (480)
T ss_pred             HHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH--
Confidence            99999998 9999999999      999999999999  999999999999999999999999999999887655543  


Q ss_pred             cCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCC
Q 007923          381 EEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEA  442 (585)
Q Consensus       381 ~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g  442 (585)
                                    |++.|++++.+|..|.||||+|+.         .++.+++++|.+.++
T Consensus       269 --------------Ll~~gad~n~~d~~g~tpl~~A~~---------~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        269 --------------LLDLGANPNLVNKYGDTPLHIAIL---------NNNKEIFKLLLNNGP  307 (480)
T ss_pred             --------------HHHcCCCCCccCCCCCcHHHHHHH---------hCCHHHHHHHHhcCC
Confidence                          789999999999999999999998         445555555554444


No 10 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.2e-37  Score=341.13  Aligned_cols=285  Identities=11%  Similarity=0.056  Sum_probs=226.6

Q ss_pred             hhhhHHHHHHh--cChhHHHHHHHhhccccccccccCChHHHHHHHHhh--HHHHHHHHhcCCCccccCCCChhHHhhhc
Q 007923          160 FMVEVLYVSFA--FQVPELVALYQRHLLDILDKVVADDILVVLSVAHMC--GKACEKLLERCIEITVKSDIDIVTLDKTL  235 (585)
Q Consensus       160 f~~t~L~~A~~--~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~--~~~~~~Ll~~g~din~~d~~g~t~L~~A~  235 (585)
                      ...||||+|+.  ++..+++++|+++|++++.++..|.|||++|+..++  .+++++|+++|+|+|.+|..|+||||.|+
T Consensus       176 ~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai  255 (764)
T PHA02716        176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYI  255 (764)
T ss_pred             CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            34789999864  467899999999999999999999999999999884  58999999999999999999999999763


Q ss_pred             c------------------------------------cCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHh--CCCH
Q 007923          236 P------------------------------------QHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALD--SDDV  277 (585)
Q Consensus       236 ~------------------------------------~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~--~g~~  277 (585)
                      .                                    ..+..+++++|+++|++++.   +|..|+||||+|+.  .++.
T Consensus       256 ~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~---kD~~G~TPLH~Aaa~~~~~~  332 (764)
T PHA02716        256 INIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHY---KDSAGRTCLHQYILRHNIST  332 (764)
T ss_pred             HhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceec---cCCCCCCHHHHHHHHhCCCc
Confidence            1                                    13567899999999999999   89999999999874  5689


Q ss_pred             HHHHHHHhCCC----CCCCCchHHHHHHH--------------cCCHHHHHHHHhhCCCCcccCCCCCChHHHHH----H
Q 007923          278 ELVRMLLKEAH----TNLDDAHALHYAVA--------------YCDAKTTTELLDLGLADVNHRNSRGYTVLHVA----A  335 (585)
Q Consensus       278 ~~v~~Ll~~g~----~d~~g~tpLh~A~~--------------~g~~~~v~~LL~~~~advn~~d~~G~TpLh~A----a  335 (585)
                      +++++|++.|+    .|..|+||||+|+.              .++.+++++|++.| +|++.+|..|+||||.|    .
T Consensus       333 eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~  411 (764)
T PHA02716        333 DIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYICTAQ  411 (764)
T ss_pred             hHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHH
Confidence            99999999994    67889999999875              36899999999987 99999999999999942    2


Q ss_pred             HcCCHHHHHHHHHcCCC-------------------------------------------------------------CC
Q 007923          336 MRKEPKIIVSLLTKGAR-------------------------------------------------------------PS  354 (585)
Q Consensus       336 ~~g~~~iv~~Ll~~gad-------------------------------------------------------------~~  354 (585)
                      ..++.+++++|++.|+.                                                             +|
T Consensus       412 n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN  491 (764)
T PHA02716        412 NYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNA  491 (764)
T ss_pred             hcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhcccc
Confidence            35788999999887653                                                             23


Q ss_pred             CCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhh
Q 007923          355 DLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLA  434 (585)
Q Consensus       355 ~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~  434 (585)
                      ..|..|+||||+|+..++...++.           .....|++.|+++|.+|.+|+||||+|+..++..    ..+.+++
T Consensus       492 ~~D~~G~TPLh~Aa~~g~~~~v~~-----------e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~----~~~~eIv  556 (764)
T PHA02716        492 VCETSGMTPLHVSIISHTNANIVM-----------DSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLS----GHQWYIV  556 (764)
T ss_pred             ccCCCCCCHHHHHHHcCCccchhH-----------HHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCcc----ccHHHHH
Confidence            335556666666665554433310           1123478899999999999999999999844320    0022666


Q ss_pred             hhcCCCC---CchhhHHhhhcCCccccccccc
Q 007923          435 KLLFPME---AKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       435 ~~L~~~~---g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                      ++|.+++   ..+.+++|...++.+++.++..
T Consensus       557 k~LL~~ga~~~~~~l~~~~~~~~~~~~~ll~~  588 (764)
T PHA02716        557 KNILDKRPNVDIVIIFLDKCYANGKFPSLLLS  588 (764)
T ss_pred             HHHHhcCCCcchHHHHHHhhhhhhHHHHHHHH
Confidence            6664433   3456888888888888888876


No 11 
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.1e-37  Score=345.65  Aligned_cols=295  Identities=14%  Similarity=0.117  Sum_probs=236.0

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .++|+.|+..+..+++++|+++|++++.++..|.||+++|+..|+.+++++|+++|++++..+..|.||||+|+. .++.
T Consensus       146 ~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~-~~~~  224 (682)
T PHA02876        146 MKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVD-SKNI  224 (682)
T ss_pred             hHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHH-cCCH
Confidence            577888888888888888888888888888888888888888888888888888888888888888888888877 4555


Q ss_pred             HHHH-----------------------------HHHHcCCCCCCCCCCCCCCChHHHHHHhCCCH-HHHHHHHhCCC---
Q 007923          242 QIID-----------------------------LRVELSLHRSESCGFPDKHTKRIHRALDSDDV-ELVRMLLKEAH---  288 (585)
Q Consensus       242 ~i~~-----------------------------~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~-~~v~~Ll~~g~---  288 (585)
                      ++++                             +|++.|++++.   .+..|.||||+|+..++. +++++|++.|+   
T Consensus       225 ~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~---~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin  301 (682)
T PHA02876        225 DTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNS---IDDCKNTPLHHASQAPSLSRLVPKLLERGADVN  301 (682)
T ss_pred             HHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC
Confidence            5544                             44555666776   677888888888888886 58888888883   


Q ss_pred             -CCCCCchHHHHHHHcC-CHHHHHHHHhhCCCCcccCCCCCChHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q 007923          289 -TNLDDAHALHYAVAYC-DAKTTTELLDLGLADVNHRNSRGYTVLHVAAMR-KEPKIIVSLLTKGARPSDLTLDGRKALQ  365 (585)
Q Consensus       289 -~d~~g~tpLh~A~~~g-~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~-g~~~iv~~Ll~~gad~~~~d~~G~TpL~  365 (585)
                       .|.+|.||||+|+..| +.++++.|+..| +++|.+|..|+||||+|+.. ++.+++++|+++|++++.+|..|+||||
T Consensus       302 ~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh  380 (682)
T PHA02876        302 AKNIKGETPLYLMAKNGYDTENIRTLIMLG-ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIH  380 (682)
T ss_pred             CcCCCCCCHHHHHHHhCCCHHHHHHHHHcC-CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHH
Confidence             5677888888888888 578888888777 88888888888888888875 4678888888888888888888888888


Q ss_pred             HHHHcCC----------CCcccccCcCCCCCcccc--------hHHHHHHhhhhcCCcccCCCCHHHHHHhhh-hhHHHH
Q 007923          366 ISKRLTK----------AADYYIPTEEGKTTPKDR--------LCIEILEQAERRDPLLREASHSFAMAGDDL-RMKLLY  426 (585)
Q Consensus       366 ~A~~~~~----------~~~~~~~~~~g~t~~~~~--------~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~-~~~~l~  426 (585)
                      +|+..++          +++++..+..|.|++...        ....|++.++++|.+|..|+||||+|+..+ +..++.
T Consensus       381 ~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~  460 (682)
T PHA02876        381 YAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIE  460 (682)
T ss_pred             HHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHH
Confidence            8888644          667777777777774211        133567889999999999999999999865 567777


Q ss_pred             HHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923          427 LENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       427 l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                      +.-..++.....+..|.||+++|+..+  +++.++..
T Consensus       461 lLl~~Gad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~  495 (682)
T PHA02876        461 MLLDNGADVNAINIQNQYPLLIALEYH--GIVNILLH  495 (682)
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHH
Confidence            777778888889999999999997654  45555544


No 12 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.8e-37  Score=334.53  Aligned_cols=246  Identities=15%  Similarity=0.161  Sum_probs=223.8

Q ss_pred             hhhhHHHHHHhcC---hhHHHHHHHhhccccccccccCChHHHHHHHHh-hHHHHHHHHhcCCCccccCCCChhHHhhhc
Q 007923          160 FMVEVLYVSFAFQ---VPELVALYQRHLLDILDKVVADDILVVLSVAHM-CGKACEKLLERCIEITVKSDIDIVTLDKTL  235 (585)
Q Consensus       160 f~~t~L~~A~~~~---~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~-~~~~~~~Ll~~g~din~~d~~g~t~L~~A~  235 (585)
                      +..||||+|+..+   ..+++++|+++|++++.++..|.||+|+|+..+ ..+++++|+++|+++|.+|..|.||||+|+
T Consensus        46 ~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~  125 (471)
T PHA03095         46 YGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYL  125 (471)
T ss_pred             CCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence            3479999999999   999999999999999999999999999999999 699999999999999999999999999999


Q ss_pred             c-cCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCC--CHHHHHHHHhCCC----CCCCCchHHHHHHHc--CCH
Q 007923          236 P-QHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSD--DVELVRMLLKEAH----TNLDDAHALHYAVAY--CDA  306 (585)
Q Consensus       236 ~-~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~--g~~  306 (585)
                      . ..++.+++++|+++|++++.   +|..|.||||+|+..+  +.+++++|++.|+    .|..|+||||+|+..  ++.
T Consensus       126 ~~~~~~~~iv~~Ll~~gad~~~---~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~  202 (471)
T PHA03095        126 SGFNINPKVIRLLLRKGADVNA---LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRA  202 (471)
T ss_pred             hCCcCCHHHHHHHHHcCCCCCc---cCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcH
Confidence            3 15678999999999999999   8999999999999866  6899999999983    578899999999975  678


Q ss_pred             HHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCH--HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCC
Q 007923          307 KTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEP--KIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGK  384 (585)
Q Consensus       307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~--~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~  384 (585)
                      ++++.|+..| ++++.+|..|+||||+|+..|+.  .+++.|+++|+++|.+|.+|+||||+|+..|+...+..      
T Consensus       203 ~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~------  275 (471)
T PHA03095        203 RIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRR------  275 (471)
T ss_pred             HHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH------
Confidence            9999999998 99999999999999999999975  68999999999999999999999999999877665543      


Q ss_pred             CCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHH
Q 007923          385 TTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLL  425 (585)
Q Consensus       385 t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l  425 (585)
                                ||+.|++++.++.+|.||||+|+..++..++
T Consensus       276 ----------LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v  306 (471)
T PHA03095        276 ----------LIALGADINAVSSDGNTPLSLMVRNNNGRAV  306 (471)
T ss_pred             ----------HHHcCCCCcccCCCCCCHHHHHHHhCCHHHH
Confidence                      8899999999999999999999984444443


No 13 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7e-37  Score=327.31  Aligned_cols=237  Identities=17%  Similarity=0.163  Sum_probs=214.6

Q ss_pred             hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcC-----------------------
Q 007923          161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERC-----------------------  217 (585)
Q Consensus       161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g-----------------------  217 (585)
                      ..||||.|+..|..+++++|+++|++++..+..|.+|+++|+..++.+++++|+++|                       
T Consensus        35 ~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g  114 (434)
T PHA02874         35 TTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCG  114 (434)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCc
Confidence            379999999999999999999999999999999999999999999998888888766                       


Q ss_pred             CCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCC
Q 007923          218 IEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDD  293 (585)
Q Consensus       218 ~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g  293 (585)
                      ++++.++..|.||||+|+. .+..+++++|+++|++++.   +|..|.||||+|+..|+.+++++|+++|+    .|..|
T Consensus       115 ~d~n~~~~~g~T~Lh~A~~-~~~~~~v~~Ll~~gad~n~---~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g  190 (434)
T PHA02874        115 IDVNIKDAELKTFLHYAIK-KGDLESIKMLFEYGADVNI---EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG  190 (434)
T ss_pred             CCCCCCCCCCccHHHHHHH-CCCHHHHHHHHhCCCCCCC---cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC
Confidence            4567889999999999999 7999999999999999999   89999999999999999999999999994    56889


Q ss_pred             chHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-
Q 007923          294 AHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK-  372 (585)
Q Consensus       294 ~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~-  372 (585)
                      +||||+|+..|+.+++++|++.| ++++.++..|+||||+|+..+. +++.+|+ .|++++.+|.+|+||||+|+..+. 
T Consensus       191 ~tpL~~A~~~g~~~iv~~Ll~~g-~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~  267 (434)
T PHA02874        191 ESPLHNAAEYGDYACIKLLIDHG-NHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCD  267 (434)
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCc
Confidence            99999999999999999999998 9999999999999999999865 5666666 699999999999999999998642 


Q ss_pred             CCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh
Q 007923          373 AADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL  420 (585)
Q Consensus       373 ~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~  420 (585)
                      ...+                .-|++.+++++.+|..|.||||+|++..
T Consensus       268 ~~iv----------------~~Ll~~gad~n~~d~~g~TpL~~A~~~~  299 (434)
T PHA02874        268 IDII----------------DILLYHKADISIKDNKGENPIDTAFKYI  299 (434)
T ss_pred             HHHH----------------HHHHHCcCCCCCCCCCCCCHHHHHHHhC
Confidence            2222                2368899999999999999999999743


No 14 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.7e-37  Score=332.86  Aligned_cols=277  Identities=17%  Similarity=0.110  Sum_probs=252.6

Q ss_pred             ChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhh-----hcccCCHHHHHHH
Q 007923          172 QVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDK-----TLPQHIVKQIIDL  246 (585)
Q Consensus       172 ~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~-----A~~~~~~~~i~~~  246 (585)
                      ...++++++++.+...+..+..+.||+++|+..++.+++++|+++|++++..+..|.||||+     |+. .+..+++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~-~~~~~iv~~   91 (480)
T PHA03100         13 IKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNL-TDVKEIVKL   91 (480)
T ss_pred             HHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHh-hchHHHHHH
Confidence            34567888888877777788899999999999999999999999999999999999999999     999 799999999


Q ss_pred             HHHcCCCCCCCCCCCCCCChHHHHHH--hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcC--CHHHHHHHHhhCCC
Q 007923          247 RVELSLHRSESCGFPDKHTKRIHRAL--DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYC--DAKTTTELLDLGLA  318 (585)
Q Consensus       247 Ll~~ga~in~~~~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g--~~~~v~~LL~~~~a  318 (585)
                      |+++|++++.   .+..|.||||+|+  ..|+.+++++|++.|+    .+..|.||||+|+..|  +.++++.|++.| +
T Consensus        92 Ll~~ga~i~~---~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~  167 (480)
T PHA03100         92 LLEYGANVNA---PDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG-V  167 (480)
T ss_pred             HHHCCCCCCC---CCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-C
Confidence            9999999998   8999999999999  9999999999999993    5688999999999999  999999999998 9


Q ss_pred             CcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC------CCHHHHHHHcCC--CCcccccCcCCCCCcccc
Q 007923          319 DVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDG------RKALQISKRLTK--AADYYIPTEEGKTTPKDR  390 (585)
Q Consensus       319 dvn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G------~TpL~~A~~~~~--~~~~~~~~~~g~t~~~~~  390 (585)
                      ++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|      .||||+|+..++  ...+.             
T Consensus       168 din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~-------------  234 (480)
T PHA03100        168 DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVN-------------  234 (480)
T ss_pred             CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHH-------------
Confidence            999999999999999999999999999999999999999999      999999999877  44333             


Q ss_pred             hHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccccccccCc
Q 007923          391 LCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGA  470 (585)
Q Consensus       391 ~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~  470 (585)
                         .|++.|+++|.+|..|.||||+|+..++.+++.+.-..+......+..|.||+++|...++.+++.++..    .|+
T Consensus       235 ---~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~----~g~  307 (480)
T PHA03100        235 ---YLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLN----NGP  307 (480)
T ss_pred             ---HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHh----cCC
Confidence               3788899999999999999999999888888888777777778899999999999999999999998887    555


Q ss_pred             CCc
Q 007923          471 QRT  473 (585)
Q Consensus       471 ~~~  473 (585)
                      +..
T Consensus       308 ~i~  310 (480)
T PHA03100        308 SIK  310 (480)
T ss_pred             CHH
Confidence            433


No 15 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.3e-36  Score=326.93  Aligned_cols=276  Identities=12%  Similarity=0.131  Sum_probs=235.3

Q ss_pred             cChhHHHHHHHhhccccccccccCChHHHHHHHHh--hHHHHHHHHhcCCCccccCCCChhHHhhhccc-----CCHHHH
Q 007923          171 FQVPELVALYQRHLLDILDKVVADDILVVLSVAHM--CGKACEKLLERCIEITVKSDIDIVTLDKTLPQ-----HIVKQI  243 (585)
Q Consensus       171 ~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~--~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~-----~~~~~i  243 (585)
                      ....+++++|+++|+++|.. ..|.++++++++.+  +.+++++|+++|+|+|.++ .+.||||.|+..     .+..++
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~i   90 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKI   90 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHH
Confidence            46678999999999999998 67889888877765  6899999999999999986 579999988752     245789


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCChHHHHHHhC---CCHHHHHHHHhCC-CC----CCCCchHHHHHHHc--CCHHHHHHHH
Q 007923          244 IDLRVELSLHRSESCGFPDKHTKRIHRALDS---DDVELVRMLLKEA-HT----NLDDAHALHYAVAY--CDAKTTTELL  313 (585)
Q Consensus       244 ~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g-~~----d~~g~tpLh~A~~~--g~~~~v~~LL  313 (585)
                      +++|+++|+|+|.   +|..|+||||.|+..   |+.++|++|+++| ++    |..|+||||+|+..  ++.++|++|+
T Consensus        91 v~~Ll~~Gadin~---~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll  167 (494)
T PHA02989         91 VKLLLKFGADINL---KTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL  167 (494)
T ss_pred             HHHHHHCCCCCCC---CCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence            9999999999999   899999999988765   6899999999999 35    47899999998764  5899999999


Q ss_pred             hhCCCCccc-CCCCCChHHHHHHHcC----CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcc
Q 007923          314 DLGLADVNH-RNSRGYTVLHVAAMRK----EPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPK  388 (585)
Q Consensus       314 ~~~~advn~-~d~~G~TpLh~Aa~~g----~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~  388 (585)
                      +.| +|++. .+..|.||||+|+..+    +.+++++|+++|++++.+|..|.||||.++..+....           ..
T Consensus       168 ~~G-adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~-----------~~  235 (494)
T PHA02989        168 SFG-VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILS-----------KK  235 (494)
T ss_pred             HcC-CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhc-----------cc
Confidence            998 99998 6889999999998764    8999999999999999999999999998886533110           01


Q ss_pred             cchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923          389 DRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       389 ~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                      ....+.++..++++|.+|..|.||||+|+..++.+++.++-..+......+..|+||||+|+..++.+++..++.
T Consensus       236 ~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~  310 (494)
T PHA02989        236 EFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQ  310 (494)
T ss_pred             chHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            122345677789999999999999999999888888877777788888899999999999999999999887765


No 16 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.3e-35  Score=321.12  Aligned_cols=234  Identities=17%  Similarity=0.135  Sum_probs=208.8

Q ss_pred             hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923          161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~  240 (585)
                      ..||||+|+..|..++|++|+++|++++.++..|.||+|+|+..++.+++++|++.+.+.+.  ..+.+||+.|+.. +.
T Consensus        37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~-~~  113 (477)
T PHA02878         37 PFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFNN-RN  113 (477)
T ss_pred             CcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHHc-CC
Confidence            36899999999999999999999999999999999999999999999999999998876655  4678898888752 32


Q ss_pred             ---------------------------------HHHHHHHHHcCCCCCCCCCCCCC-CChHHHHHHhCCCHHHHHHHHhC
Q 007923          241 ---------------------------------KQIIDLRVELSLHRSESCGFPDK-HTKRIHRALDSDDVELVRMLLKE  286 (585)
Q Consensus       241 ---------------------------------~~i~~~Ll~~ga~in~~~~~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~  286 (585)
                                                       .+++++|+++|++++.   ++.. |.||||+|+..|+.+++++|++.
T Consensus       114 ~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~---~~~~~g~tpLh~A~~~~~~~iv~~Ll~~  190 (477)
T PHA02878        114 VEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINM---KDRHKGNTALHYATENKDQRLTELLLSY  190 (477)
T ss_pred             HHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCc---cCCCCCCCHHHHHHhCCCHHHHHHHHHC
Confidence                                             3488899999999999   8888 99999999999999999999999


Q ss_pred             CC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHc-CCHHHHHHHHHcCCCCCCCCC-CC
Q 007923          287 AH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMR-KEPKIIVSLLTKGARPSDLTL-DG  360 (585)
Q Consensus       287 g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~-g~~~iv~~Ll~~gad~~~~d~-~G  360 (585)
                      |+    .|..|+||||+|+..|+.++++.|++.| +++|.+|..|+||||+|+.. ++.+++++|+++|++++.++. .|
T Consensus       191 gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g  269 (477)
T PHA02878        191 GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG-ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILG  269 (477)
T ss_pred             CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCC
Confidence            94    5688999999999999999999999988 99999999999999999976 789999999999999999986 89


Q ss_pred             CCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhh
Q 007923          361 RKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDD  419 (585)
Q Consensus       361 ~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~  419 (585)
                      +||||+|+.  +...                ...|++.|+++|.+|..|.||||+|+..
T Consensus       270 ~TpLh~A~~--~~~~----------------v~~Ll~~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        270 LTALHSSIK--SERK----------------LKLLLEYGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             CCHHHHHcc--CHHH----------------HHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence            999999942  2211                2347889999999999999999999973


No 17 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=4.1e-36  Score=314.96  Aligned_cols=266  Identities=15%  Similarity=0.120  Sum_probs=242.5

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .+|+|+|+..+..+.++.|+++|+|+|..+..+.||+|+|+..++.+..+.|++.|+++-..|.+|.+|+|.|+. .+..
T Consensus       122 ~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~-s~s~  200 (929)
T KOG0510|consen  122 NAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAAR-SGSK  200 (929)
T ss_pred             cCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHH-hcch
Confidence            789999999999999999999999999999999999999999999998899999999999999999999999999 7999


Q ss_pred             HHHHHHHH-----cCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-------------------CCCCCchHH
Q 007923          242 QIIDLRVE-----LSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-------------------TNLDDAHAL  297 (585)
Q Consensus       242 ~i~~~Ll~-----~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-------------------~d~~g~tpL  297 (585)
                      ++.++.+.     .+..+|.   .+..|.||||.|++.|+.++++.+|+.|+                   .|.+|.|||
T Consensus       201 e~mEi~l~~~g~~r~~~in~---~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpL  277 (929)
T KOG0510|consen  201 ECMEIFLPEHGYERQTHINF---DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPL  277 (929)
T ss_pred             hhhhhhhccccchhhccccc---ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchH
Confidence            99999998     6778998   78899999999999999999999999983                   357899999


Q ss_pred             HHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH-cCC-CCCCCCCCCCCHHHHHHHcCCCCc
Q 007923          298 HYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT-KGA-RPSDLTLDGRKALQISKRLTKAAD  375 (585)
Q Consensus       298 h~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~-~ga-d~~~~d~~G~TpL~~A~~~~~~~~  375 (585)
                      |+|++.|+.+.+..||..| +++|.++.++.||||.||.+|+.++|+.||+ .|. ..|..|..|.||||+|++.||...
T Consensus       278 H~a~r~G~~~svd~Ll~~G-a~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v  356 (929)
T KOG0510|consen  278 HYAARQGGPESVDNLLGFG-ASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRV  356 (929)
T ss_pred             HHHHHcCChhHHHHHHHcC-CcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHH
Confidence            9999999999999999998 9999999999999999999999999999999 554 689999999999999999988887


Q ss_pred             ccccCcCCCCCcccchHHHHHHhhhhcC---CcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHH
Q 007923          376 YYIPTEEGKTTPKDRLCIEILEQAERRD---PLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDI  448 (585)
Q Consensus       376 ~~~~~~~g~t~~~~~~~~~ll~~~~~~n---~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~  448 (585)
                      +..                ||.+|+...   ..|.+|+||||.|+..++...+...-..++..--+++.|++++|+
T Consensus       357 ~ql----------------Ll~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  357 VQL----------------LLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             HHH----------------HHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            765                566776554   459999999999999777777776666666666689999999997


No 18 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.4e-35  Score=294.77  Aligned_cols=216  Identities=11%  Similarity=0.059  Sum_probs=166.9

Q ss_pred             hcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHH
Q 007923          170 AFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVE  249 (585)
Q Consensus       170 ~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~  249 (585)
                      .++..+++++|+++|++  .+|.+|.||+++|+..++.+++++|+++|++++.++  |+||||+|+. .++.+++++|++
T Consensus         8 ~~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~-~g~~eiV~lLL~   82 (284)
T PHA02791          8 TWKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAAT-LEDTKIVKILLF   82 (284)
T ss_pred             ccCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHH-CCCHHHHHHHHH
Confidence            35677788888887764  567778888888888888888888888888877764  5788888888 678888888888


Q ss_pred             cCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCc-hHHHHHHHcCCHHHHHHHHhhCCCCcccCC
Q 007923          250 LSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDA-HALHYAVAYCDAKTTTELLDLGLADVNHRN  324 (585)
Q Consensus       250 ~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~-tpLh~A~~~g~~~~v~~LL~~~~advn~~d  324 (585)
                      +|++++.   +|..|+||||+|+..|+.+++++|+++|+    .+..|+ ||||+|+..|+.++|++||..+ .+.  .|
T Consensus        83 ~Gadvn~---~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~-~~~--~d  156 (284)
T PHA02791         83 SGMDDSQ---FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PST--FD  156 (284)
T ss_pred             CCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcC-Ccc--cc
Confidence            8888888   78888888888888888888888888883    344554 7888888888888888888776 322  23


Q ss_pred             -CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhc
Q 007923          325 -SRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKA-LQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERR  402 (585)
Q Consensus       325 -~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp-L~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~  402 (585)
                       ..|+||||+|+.+|+.+++++||++||+++.+|..|.|| ||+|+..++...+..                |++.|+++
T Consensus       157 ~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~l----------------Ll~~Ga~i  220 (284)
T PHA02791        157 LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQA----------------LFKYDINI  220 (284)
T ss_pred             cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHH----------------HHHCCCCC
Confidence             247888888888888888888888888888888888876 888888777665544                67788888


Q ss_pred             CCcccCCCCHH
Q 007923          403 DPLLREASHSF  413 (585)
Q Consensus       403 n~~~~~g~t~L  413 (585)
                      |.+|.+| |+|
T Consensus       221 n~~~~~~-~~l  230 (284)
T PHA02791        221 YSVNLEN-VLL  230 (284)
T ss_pred             ccCcccC-ccC
Confidence            8877754 554


No 19 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.9e-35  Score=293.73  Aligned_cols=197  Identities=16%  Similarity=0.060  Sum_probs=183.8

Q ss_pred             hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923          161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~  240 (585)
                      ..||||+|+..|..+++++|+++|++++..+  +.||+++|+..++.+++++|+++|++++.+|..|+||||+|+. .++
T Consensus        30 G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~-~g~  106 (284)
T PHA02791         30 GHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD-SGN  106 (284)
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCC
Confidence            3799999999999999999999999988764  6899999999999999999999999999999999999999999 799


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCC-hHHHHHHhCCCHHHHHHHHhCCC--CC-CCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923          241 KQIIDLRVELSLHRSESCGFPDKHT-KRIHRALDSDDVELVRMLLKEAH--TN-LDDAHALHYAVAYCDAKTTTELLDLG  316 (585)
Q Consensus       241 ~~i~~~Ll~~ga~in~~~~~d~~g~-t~Lh~A~~~g~~~~v~~Ll~~g~--~d-~~g~tpLh~A~~~g~~~~v~~LL~~~  316 (585)
                      .+++++|+++|++++.   ++..|+ ||||+|+..|+.++|++|++++.  .| ..|.||||+|+..|+.++++.||+.|
T Consensus       107 ~eivk~Ll~~gadin~---~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~g  183 (284)
T PHA02791        107 MQTVKLFVKKNWRLMF---YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM  183 (284)
T ss_pred             HHHHHHHHHCCCCcCc---cCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCC
Confidence            9999999999999998   788885 89999999999999999999873  34 35899999999999999999999997


Q ss_pred             CCCcccCCCCCChH-HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q 007923          317 LADVNHRNSRGYTV-LHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQ  365 (585)
Q Consensus       317 ~advn~~d~~G~Tp-Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~  365 (585)
                       +++|.+|..|.|| ||+|+..|+.++|++|+++||+++.+|..| |||.
T Consensus       184 -Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l~  231 (284)
T PHA02791        184 -TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLLD  231 (284)
T ss_pred             -CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccCC
Confidence             9999999999987 999999999999999999999999999954 7774


No 20 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=4.4e-36  Score=262.33  Aligned_cols=201  Identities=17%  Similarity=0.140  Sum_probs=179.8

Q ss_pred             hHHHHHHhcChhHHHHHHHhhcc-ccccccc-cCChHHHHHHHHhhHHHHHHHHh-cCCCccccCCCChhHHhhhcccCC
Q 007923          163 EVLYVSFAFQVPELVALYQRHLL-DILDKVV-ADDILVVLSVAHMCGKACEKLLE-RCIEITVKSDIDIVTLDKTLPQHI  239 (585)
Q Consensus       163 t~L~~A~~~~~~elv~~ll~~g~-~~~~~~~-~~~t~l~l~~a~~~~~~~~~Ll~-~g~din~~d~~g~t~L~~A~~~~~  239 (585)
                      ++.+.++...-..-++.++.... .++.++. +|+||||+++.+++.+++.+|++ .++.+|.+|..||||||+|+. .+
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s-~g   83 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAAS-NG   83 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhh-cC
Confidence            34455555555555666655544 5666665 99999999999999999999995 588999999999999999999 79


Q ss_pred             HHHHHHHHHHc-CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHh
Q 007923          240 VKQIIDLRVEL-SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLD  314 (585)
Q Consensus       240 ~~~i~~~Ll~~-ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~  314 (585)
                      +.++|+-|+.+ |+|+|.   .++.|+|+||+|+..|..+++++|+++|+    .|..|.||||.|+.-|+.+++++|+.
T Consensus        84 ~~evVk~Ll~r~~advna---~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~  160 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNA---TTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLIS  160 (226)
T ss_pred             cHHHHHHHhcCCCCCcce---ecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHh
Confidence            99999999988 999999   89999999999999999999999999995    67889999999999999999999999


Q ss_pred             hCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923          315 LGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR  369 (585)
Q Consensus       315 ~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~  369 (585)
                      .+ +.+|.+|+.|+||||.|...|+.++..+|+++||++...|+.| ||+.+|+-
T Consensus       161 ~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  161 QG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             cC-CCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            98 9999999999999999988999999999999999999999999 99988763


No 21 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.2e-35  Score=311.22  Aligned_cols=237  Identities=16%  Similarity=0.124  Sum_probs=218.2

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .++||.|+..|..+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++++.++..+.||||.|+. .+..
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~-~g~~   81 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVE-EGDV   81 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHH-CCCH
Confidence            368999999999999999999999999999999999999999999999999999999999999999999999999 7999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923          242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL  317 (585)
Q Consensus       242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~  317 (585)
                      +++++|++.|++++..  .+..|.||||+|+..|+.+++++|++.|+    .+..|.||||+|+..|+.++++.|++.| 
T Consensus        82 ~~v~~Ll~~~~~~~~~--~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g-  158 (413)
T PHA02875         82 KAVEELLDLGKFADDV--FYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-  158 (413)
T ss_pred             HHHHHHHHcCCccccc--ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-
Confidence            9999999999887542  46789999999999999999999999994    5678999999999999999999999998 


Q ss_pred             CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcCCCCcccccCcCCCCCcccchHHHHH
Q 007923          318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGR-KALQISKRLTKAADYYIPTEEGKTTPKDRLCIEIL  396 (585)
Q Consensus       318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~-TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll  396 (585)
                      ++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..++...+..                |+
T Consensus       159 ~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~----------------Ll  222 (413)
T PHA02875        159 ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRL----------------FI  222 (413)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHH----------------HH
Confidence            99999999999999999999999999999999999999998875 88999999888776654                78


Q ss_pred             HhhhhcCCc---ccCCCCHHHHHHh
Q 007923          397 EQAERRDPL---LREASHSFAMAGD  418 (585)
Q Consensus       397 ~~~~~~n~~---~~~g~t~Lh~A~~  418 (585)
                      +.|+++|..   ++++.||+++++.
T Consensus       223 ~~gad~n~~~~~~~~~~t~l~~~~~  247 (413)
T PHA02875        223 KRGADCNIMFMIEGEECTILDMICN  247 (413)
T ss_pred             HCCcCcchHhhcCCCchHHHHHHHh
Confidence            888888764   6778999998764


No 22 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=6.1e-35  Score=255.17  Aligned_cols=190  Identities=19%  Similarity=0.201  Sum_probs=170.4

Q ss_pred             HHHHHHHHhcCC-CccccCC-CChhHHhhhcccCCHHHHHHHHH-HcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHH
Q 007923          207 GKACEKLLERCI-EITVKSD-IDIVTLDKTLPQHIVKQIIDLRV-ELSLHRSESCGFPDKHTKRIHRALDSDDVELVRML  283 (585)
Q Consensus       207 ~~~~~~Ll~~g~-din~~d~-~g~t~L~~A~~~~~~~~i~~~Ll-~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~L  283 (585)
                      ..-++.|++... .+|.++. +|+||||+||. -++.+|+.+|+ +.+..+|.   +|..||||||+|+..|+.++|+.|
T Consensus        16 ~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S-~g~~eiv~fLlsq~nv~~dd---kDdaGWtPlhia~s~g~~evVk~L   91 (226)
T KOG4412|consen   16 EFKVEELIQSDPKSLNARDDQDGRTPLHWACS-FGHVEIVYFLLSQPNVKPDD---KDDAGWTPLHIAASNGNDEVVKEL   91 (226)
T ss_pred             HHHHHHHHhcChhhhhccccccCCceeeeeee-cCchhHHHHHHhcCCCCCCC---ccccCCchhhhhhhcCcHHHHHHH
Confidence            334556666655 6788877 89999999999 69999999999 66788888   899999999999999999999999


Q ss_pred             HhC-C-C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 007923          284 LKE-A-H---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTL  358 (585)
Q Consensus       284 l~~-g-~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~  358 (585)
                      +.. | +   ++..|.|+||||+..|..+++++||+.| +.|+.+|..|.||||-||.-|..+++++|+..||.+|.+|+
T Consensus        92 l~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk  170 (226)
T KOG4412|consen   92 LNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDK  170 (226)
T ss_pred             hcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcC-CCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccc
Confidence            998 5 2   6688999999999999999999999998 99999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923          359 DGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGD  418 (585)
Q Consensus       359 ~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~  418 (585)
                      .|+||||.|..-+|+...                +.|++.+++.+..|++| ||+..|+.
T Consensus       171 ~G~TpL~~al~e~~~d~a----------------~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  171 YGFTPLHHALAEGHPDVA----------------VLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             cCccHHHHHHhccCchHH----------------HHHHHhccceeeccccC-chHHHHHH
Confidence            999999999766665533                44889999999999999 99999986


No 23 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.9e-34  Score=303.74  Aligned_cols=236  Identities=18%  Similarity=0.154  Sum_probs=213.3

Q ss_pred             CChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHh
Q 007923          194 DDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALD  273 (585)
Q Consensus       194 ~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~  273 (585)
                      .+++++.|+..|+.+++++|+++|+++|.++..|.||||+|+. .++.+++++|+++|++++.   .+..|.||||.|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~---~~~~~~t~L~~A~~   77 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMK-FRDSEAIKLLMKHGAIPDV---KYPDIESELHDAVE   77 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH-cCCHHHHHHHHhCCCCccc---cCCCcccHHHHHHH
Confidence            4678999999999999999999999999999999999999999 7999999999999999998   78899999999999


Q ss_pred             CCCHHHHHHHHhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923          274 SDDVELVRMLLKEAH-----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT  348 (585)
Q Consensus       274 ~g~~~~v~~Ll~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~  348 (585)
                      .|+.++|++|++.|.     .+.+|.||||+|+..|+.+++++|++.| ++++.++..|.||||+|+..|+.+++++|++
T Consensus        78 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g-ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~  156 (413)
T PHA02875         78 EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG-ADPDIPNTDKFSPLHLAVMMGDIKGIELLID  156 (413)
T ss_pred             CCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999984     3467999999999999999999999998 9999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCC-CHHHHHHhhhhhHHHHH
Q 007923          349 KGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREAS-HSFAMAGDDLRMKLLYL  427 (585)
Q Consensus       349 ~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~-t~Lh~A~~~~~~~~l~l  427 (585)
                      +|++++.+|..|+||||+|+..|+...+..                |++.|++++..+..|. ||+|+|+..++.+++.+
T Consensus       157 ~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~----------------Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~  220 (413)
T PHA02875        157 HKACLDIEDCCGCTPLIIAMAKGDIAICKM----------------LLDSGANIDYFGKNGCVAALCYAIENNKIDIVRL  220 (413)
T ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHH----------------HHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHH
Confidence            999999999999999999999887655543                7889999999988875 88999999888877777


Q ss_pred             Hhhhhhhhhc---CCCCCchhhHHhh
Q 007923          428 ENRVGLAKLL---FPMEAKVIMDIVH  450 (585)
Q Consensus       428 ~~~~~~~~~L---~~~~g~t~l~~A~  450 (585)
                      .-..++....   .+.++.||++++.
T Consensus       221 Ll~~gad~n~~~~~~~~~~t~l~~~~  246 (413)
T PHA02875        221 FIKRGADCNIMFMIEGEECTILDMIC  246 (413)
T ss_pred             HHHCCcCcchHhhcCCCchHHHHHHH
Confidence            6666555443   4678899999874


No 24 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.2e-33  Score=311.90  Aligned_cols=312  Identities=11%  Similarity=0.001  Sum_probs=180.2

Q ss_pred             hhHHHHHHhc---ChhHHHHHHHhhccccccccccCChHHHHHHHHhh----HHHHHHHHhcCCCccccCCCChhHHhhh
Q 007923          162 VEVLYVSFAF---QVPELVALYQRHLLDILDKVVADDILVVLSVAHMC----GKACEKLLERCIEITVKSDIDIVTLDKT  234 (585)
Q Consensus       162 ~t~L~~A~~~---~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~----~~~~~~Ll~~g~din~~d~~g~t~L~~A  234 (585)
                      .||||+|+..   |..+++++|+++|++++.++..|.|||+.|+..++    .++++.|++++..+|..+.  .+++|.|
T Consensus        33 ~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a  110 (661)
T PHA02917         33 NNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMK  110 (661)
T ss_pred             CcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHH
Confidence            6899987544   77899999999999999999999998888877664    2334455554332333221  2344444


Q ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH--hCCCHHHHHHHHhCCC-CC---C---CC-----------c
Q 007923          235 LPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL--DSDDVELVRMLLKEAH-TN---L---DD-----------A  294 (585)
Q Consensus       235 ~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~~g~-~d---~---~g-----------~  294 (585)
                      +. .++.+++++|+++|+|+|.   +|..|+||||.|+  ..|+.++|++|+++|+ ++   .   .|           .
T Consensus       111 ~~-~~~~e~vk~Ll~~Gadin~---~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~  186 (661)
T PHA02917        111 SK-NVDVDLIKVLVEHGFDLSV---KCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCG  186 (661)
T ss_pred             hh-cCCHHHHHHHHHcCCCCCc---cCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccc
Confidence            44 4555566666666666655   5555666665332  3455666666665552 22   1   12           3


Q ss_pred             hHHHHHHH-----------cCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCH--HHHHHHHHcCCCCC----CCC
Q 007923          295 HALHYAVA-----------YCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEP--KIIVSLLTKGARPS----DLT  357 (585)
Q Consensus       295 tpLh~A~~-----------~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~--~iv~~Ll~~gad~~----~~d  357 (585)
                      ||||+|+.           +++.++|++|+..| +|+|.+|.+|+||||+|+.+|+.  ++|++|++ |++++    ..|
T Consensus       187 t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G-advn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~  264 (661)
T PHA02917        187 TVLHLYIISHLYSESDTRAYVRPEVVKCLINHG-IKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDD  264 (661)
T ss_pred             cHHHHHHhhcccccccccccCcHHHHHHHHHCC-CCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccC
Confidence            56665553           33555555555555 56666655666666666655553  45555543 55443    233


Q ss_pred             CCCCCHHHHHHHc-------------------------------------------------------------------
Q 007923          358 LDGRKALQISKRL-------------------------------------------------------------------  370 (585)
Q Consensus       358 ~~G~TpL~~A~~~-------------------------------------------------------------------  370 (585)
                      ..|.||+|+|+..                                                                   
T Consensus       265 ~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~  344 (661)
T PHA02917        265 LTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDI  344 (661)
T ss_pred             cccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCC
Confidence            3444444444411                                                                   


Q ss_pred             ---------CCCCcccccCcCCCCCcc---cchHHHHHH-hhhhcCCcccCCCCHHHHHHhhhh----------------
Q 007923          371 ---------TKAADYYIPTEEGKTTPK---DRLCIEILE-QAERRDPLLREASHSFAMAGDDLR----------------  421 (585)
Q Consensus       371 ---------~~~~~~~~~~~~g~t~~~---~~~~~~ll~-~~~~~n~~~~~g~t~Lh~A~~~~~----------------  421 (585)
                               .+|++++..+..|.++..   ......||. .|++++..+.+|.||||.|++...                
T Consensus       345 ~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~  424 (661)
T PHA02917        345 DIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCD  424 (661)
T ss_pred             cHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccch
Confidence                     234444444444444311   112224444 466666667789999999875321                


Q ss_pred             -------hHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccccccccCcCCccccC-CCCcccch
Q 007923          422 -------MKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTVDL-NEAPFKMQ  485 (585)
Q Consensus       422 -------~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~~p~~~~  485 (585)
                             ++++.+.-..+......+..|+||||+|+..+..++..++..    .|++....+. ..+|+...
T Consensus       425 ~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~----~GAdin~~d~~G~T~L~~A  492 (661)
T PHA02917        425 MSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLE----SGSDVNIRSNNGYTCIAIA  492 (661)
T ss_pred             hhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH----CcCCCCCCCCCCCCHHHHH
Confidence                   222233333333334477889999999999998888888876    6666655443 34666644


No 25 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7e-34  Score=308.72  Aligned_cols=242  Identities=14%  Similarity=0.112  Sum_probs=204.9

Q ss_pred             hhHHHHHH-hc-ChhHHHHHHHhhccccccccccCChHHHHHHHH------hhHHHHHHHHhcCCCccccCCCChhHHhh
Q 007923          162 VEVLYVSF-AF-QVPELVALYQRHLLDILDKVVADDILVVLSVAH------MCGKACEKLLERCIEITVKSDIDIVTLDK  233 (585)
Q Consensus       162 ~t~L~~A~-~~-~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~------~~~~~~~~Ll~~g~din~~d~~g~t~L~~  233 (585)
                      .||||.++ .. +..+++++|+++|+++|.++ .+.||++.++..      ++.+++++|+++|+|+|.+|..|.||||.
T Consensus        36 ~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~  114 (494)
T PHA02989         36 NSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVC  114 (494)
T ss_pred             CCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence            46665544 33 46899999999999999876 568988776543      35789999999999999999999999998


Q ss_pred             hccc--CCHHHHHHHHHHcCCCC-CCCCCCCCCCChHHHHHHhC--CCHHHHHHHHhCCC-C----CCCCchHHHHHHHc
Q 007923          234 TLPQ--HIVKQIIDLRVELSLHR-SESCGFPDKHTKRIHRALDS--DDVELVRMLLKEAH-T----NLDDAHALHYAVAY  303 (585)
Q Consensus       234 A~~~--~~~~~i~~~Ll~~ga~i-n~~~~~d~~g~t~Lh~A~~~--g~~~~v~~Ll~~g~-~----d~~g~tpLh~A~~~  303 (585)
                      |+..  .+..+++++|+++|+|+ +.   +|..|+||||+|+..  ++.++|++|+++|+ +    +..|.||||+|+..
T Consensus       115 a~~~~~~~~~eiv~~Ll~~Gadin~~---~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~  191 (494)
T PHA02989        115 FIYNSNINNCDMLRFLLSKGINVNDV---KNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRN  191 (494)
T ss_pred             HHHhcccCcHHHHHHHHHCCCCcccc---cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhc
Confidence            7642  36789999999999999 77   899999999999764  68999999999993 3    45799999999876


Q ss_pred             C----CHHHHHHHHhhCCCCcccCCCCCChHHHHHHHc------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923          304 C----DAKTTTELLDLGLADVNHRNSRGYTVLHVAAMR------KEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA  373 (585)
Q Consensus       304 g----~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~------g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~  373 (585)
                      +    +.+++++|++.| +++|.+|..|.||||.++..      +..+++++|+. |+++|.+|.+|+||||+|+..++.
T Consensus       192 ~~~~~~~~iv~~Ll~~G-a~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~  269 (494)
T PHA02989        192 DIDVISIKVIKYLIKKG-VNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNY  269 (494)
T ss_pred             ccccccHHHHHHHHhCC-CCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCH
Confidence            4    899999999998 99999999999999987754      35678887665 799999999999999999998776


Q ss_pred             CcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHH
Q 007923          374 ADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLL  425 (585)
Q Consensus       374 ~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l  425 (585)
                      ..+..                ||+.|+++|.+|..|.||||+|+..++..++
T Consensus       270 ~~v~~----------------LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv  305 (494)
T PHA02989        270 EAFNY----------------LLKLGDDIYNVSKDGDTVLTYAIKHGNIDML  305 (494)
T ss_pred             HHHHH----------------HHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence            65544                8999999999999999999999985554443


No 26 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.2e-33  Score=305.85  Aligned_cols=250  Identities=18%  Similarity=0.094  Sum_probs=208.9

Q ss_pred             ccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChH
Q 007923          188 LDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKR  267 (585)
Q Consensus       188 ~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~  267 (585)
                      +.....+.||||+|+..++.+++++|+++|+++|.+|..|+||||+|+. .++.++++.|++.+.+.+.     ..+.+|
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~~~~~~~-----~~~~~~  104 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICK-EPNKLGMKEMIRSINKCSV-----FYTLVA  104 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-CccHhHHHHHHHHHhcccc-----ccchhh
Confidence            4445568899999999999999999999999999999999999999999 7999999999998765543     457899


Q ss_pred             HHHHHhCCCHHHHHHH---------------------------------HhCCC----CCCC-CchHHHHHHHcCCHHHH
Q 007923          268 IHRALDSDDVELVRML---------------------------------LKEAH----TNLD-DAHALHYAVAYCDAKTT  309 (585)
Q Consensus       268 Lh~A~~~g~~~~v~~L---------------------------------l~~g~----~d~~-g~tpLh~A~~~g~~~~v  309 (585)
                      |+.|+..++.+++++|                                 +++|+    .+.. |+||||+|+..|+.+++
T Consensus       105 l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv  184 (477)
T PHA02878        105 IKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLT  184 (477)
T ss_pred             HHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHH
Confidence            9999988876655544                                 44552    3345 99999999999999999


Q ss_pred             HHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCCCcccccCcCCCCCcc
Q 007923          310 TELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL-TKAADYYIPTEEGKTTPK  388 (585)
Q Consensus       310 ~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~-~~~~~~~~~~~~g~t~~~  388 (585)
                      ++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++...+            
T Consensus       185 ~~Ll~~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv------------  251 (477)
T PHA02878        185 ELLLSYG-ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDIL------------  251 (477)
T ss_pred             HHHHHCC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHH------------
Confidence            9999988 99999999999999999999999999999999999999999999999999975 322222            


Q ss_pred             cchHHHHHHhhhhcCCccc-CCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcC-Ccccccccc
Q 007923          389 DRLCIEILEQAERRDPLLR-EASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDG-TLEFALDGI  462 (585)
Q Consensus       389 ~~~~~~ll~~~~~~n~~~~-~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~-~~~~~~~l~  462 (585)
                          ..|++.|+++|.++. .|.||||+|+.  ..+++.+.-..++.....+..|.||||+|...+ ..++..++.
T Consensus       252 ----~~Ll~~gadvn~~~~~~g~TpLh~A~~--~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li  321 (477)
T PHA02878        252 ----KLLLEHGVDVNAKSYILGLTALHSSIK--SERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILI  321 (477)
T ss_pred             ----HHHHHcCCCCCccCCCCCCCHHHHHcc--CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHH
Confidence                337889999999886 79999999964  445566666777778889999999999997643 344554443


No 27 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=1e-32  Score=296.89  Aligned_cols=298  Identities=12%  Similarity=0.022  Sum_probs=195.2

Q ss_pred             hhhHHHHHHhcC---hhHHHHHHHhhccccccccccCChHHHHHHHHh--hHHHHHHHHhcCC--CccccCCCChhHHhh
Q 007923          161 MVEVLYVSFAFQ---VPELVALYQRHLLDILDKVVADDILVVLSVAHM--CGKACEKLLERCI--EITVKSDIDIVTLDK  233 (585)
Q Consensus       161 ~~t~L~~A~~~~---~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~--~~~~~~~Ll~~g~--din~~d~~g~t~L~~  233 (585)
                      ..||||+|+..+   ..+++++|+++|++++.+|..|+|||++|+..+  +.+++++|+++|+  +++..+..+.+|||.
T Consensus        41 G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~  120 (672)
T PHA02730         41 GNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYS  120 (672)
T ss_pred             CCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHH
Confidence            368999998886   488999999999999999999999888888766  6888888888855  446666556666665


Q ss_pred             hcc-cCCHHHHHHHHHH-cCCCCCCCCCCC-----CCCChHHHHHHhCCCHHHHHHHHhCCC-CC----------CCCc-
Q 007923          234 TLP-QHIVKQIIDLRVE-LSLHRSESCGFP-----DKHTKRIHRALDSDDVELVRMLLKEAH-TN----------LDDA-  294 (585)
Q Consensus       234 A~~-~~~~~~i~~~Ll~-~ga~in~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d----------~~g~-  294 (585)
                      ++. -++..+++++|++ .+++++.   ..     ..|.+|+++|...++.++|++|+++|+ ++          ..+. 
T Consensus       121 y~~s~n~~~~~vk~Li~~~~~~~~~---~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~  197 (672)
T PHA02730        121 YMSSDNIDLRLLKYLIVDKRIRPSK---NTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCK  197 (672)
T ss_pred             HHHhcCCcHHHHHHHHHhcCCChhh---hhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccc
Confidence            543 1344556666664 4455554   21     145566666666666666666666652 21          1112 


Q ss_pred             hHHHHH------HHcCCHHHHHHHHhhCCCCcccCCCCCChHHHH-----------------------------------
Q 007923          295 HALHYA------VAYCDAKTTTELLDLGLADVNHRNSRGYTVLHV-----------------------------------  333 (585)
Q Consensus       295 tpLh~A------~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~-----------------------------------  333 (585)
                      |.||++      ...++.++++.|+.+| ||+|.+|..|+||||+                                   
T Consensus       198 ~~l~~~il~~~~~~~n~~eiv~lLIs~G-adIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~  276 (672)
T PHA02730        198 NSLHYYILSHRESESLSKDVIKCLIDNN-VSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRG  276 (672)
T ss_pred             hhHHHHHHhhhhhhccCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhh
Confidence            223322      2234555555555555 5666666666666653                                   


Q ss_pred             -------------------------------------------------------------------------HHHcC--
Q 007923          334 -------------------------------------------------------------------------AAMRK--  338 (585)
Q Consensus       334 -------------------------------------------------------------------------Aa~~g--  338 (585)
                                                                                               -...+  
T Consensus       277 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~  356 (672)
T PHA02730        277 VLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDM  356 (672)
T ss_pred             hHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCc
Confidence                                                                                     22222  


Q ss_pred             -CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC--------------CCC--cccccCcCCCCCccc------c-----
Q 007923          339 -EPKIIVSLLTKGARPSDLTLDGRKALQISKRLT--------------KAA--DYYIPTEEGKTTPKD------R-----  390 (585)
Q Consensus       339 -~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~--------------~~~--~~~~~~~~g~t~~~~------~-----  390 (585)
                       +.+++++|+++||++|.. ..|+||||+|+..+              +++  +++..+..|.|++..      .     
T Consensus       357 v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~  435 (672)
T PHA02730        357 VSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYH  435 (672)
T ss_pred             CcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccc
Confidence             345666666677777764 67888888877654              344  577777888887531      0     


Q ss_pred             -------h-HHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCC-CCchhhHHhhh--cCCccccc
Q 007923          391 -------L-CIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPM-EAKVIMDIVHL--DGTLEFAL  459 (585)
Q Consensus       391 -------~-~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~-~g~t~l~~A~~--~~~~~~~~  459 (585)
                             . ..-|+..++++|.+|..|.||||+|+..++.+++.++-..++.....+. .|.||||+|+.  .++.+++.
T Consensus       436 ~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~  515 (672)
T PHA02730        436 CYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVD  515 (672)
T ss_pred             ccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHH
Confidence                   0 1234567788888888888999998887777777666666766667775 58889988876  36777887


Q ss_pred             cccc
Q 007923          460 DGIK  463 (585)
Q Consensus       460 ~l~~  463 (585)
                      +++.
T Consensus       516 ~LLs  519 (672)
T PHA02730        516 LLLS  519 (672)
T ss_pred             HHHH
Confidence            7776


No 28 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.7e-33  Score=302.71  Aligned_cols=239  Identities=13%  Similarity=0.092  Sum_probs=205.1

Q ss_pred             HHHhcChhHHHHHHHhhccccccccccCChHHHHHHHH-----hhHHHHHHHHhcCCCccccCCCChhHHhhhcccC--C
Q 007923          167 VSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAH-----MCGKACEKLLERCIEITVKSDIDIVTLDKTLPQH--I  239 (585)
Q Consensus       167 ~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~-----~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~--~  239 (585)
                      .+...+..+++++|+++|++++.++..|.||++.++..     +..+++++|+++|+|+|.+|..|+||||+|+...  +
T Consensus        44 l~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~  123 (489)
T PHA02798         44 LQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYIN  123 (489)
T ss_pred             HhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcC
Confidence            44445678999999999999999999999998887653     5689999999999999999999999999999732  3


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCC---HHHHHHHHhCCC-C----CCCCchHHHHHHHc----CCHH
Q 007923          240 VKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDD---VELVRMLLKEAH-T----NLDDAHALHYAVAY----CDAK  307 (585)
Q Consensus       240 ~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~---~~~v~~Ll~~g~-~----d~~g~tpLh~A~~~----g~~~  307 (585)
                      +.+++++|+++|++++.   +|..|.||||+|+..++   .+++++|++.|+ +    +..|.||||.++..    ++.+
T Consensus       124 ~~~iv~~Ll~~Gadvn~---~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~  200 (489)
T PHA02798        124 NLEILLFMIENGADTTL---LDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDAD  200 (489)
T ss_pred             hHHHHHHHHHcCCCccc---cCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHH
Confidence            78999999999999999   89999999999999988   999999999993 3    35688999998764    4799


Q ss_pred             HHHHHHhhCCCCcccCCCCCChHHH-------HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccC
Q 007923          308 TTTELLDLGLADVNHRNSRGYTVLH-------VAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPT  380 (585)
Q Consensus       308 ~v~~LL~~~~advn~~d~~G~TpLh-------~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~  380 (585)
                      ++++|++.| ++++..+..|.|+++       ++...++.+++.+|+. |+|+|.+|..|+||||+|+..++...+.   
T Consensus       201 ivk~Li~~G-a~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~---  275 (489)
T PHA02798        201 ILKLFVDNG-FIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFE---  275 (489)
T ss_pred             HHHHHHHCC-CCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHH---
Confidence            999999998 999999999999987       2445677889988776 6999999999999999999887665544   


Q ss_pred             cCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHH
Q 007923          381 EEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLY  426 (585)
Q Consensus       381 ~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~  426 (585)
                                   .||+.|+++|.+|..|.||||+|+..++..++.
T Consensus       276 -------------~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~  308 (489)
T PHA02798        276 -------------YLLQLGGDINIITELGNTCLFTAFENESKFIFN  308 (489)
T ss_pred             -------------HHHHcCCcccccCCCCCcHHHHHHHcCcHHHHH
Confidence                         388999999999999999999999855544443


No 29 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.8e-33  Score=302.56  Aligned_cols=272  Identities=10%  Similarity=0.048  Sum_probs=226.9

Q ss_pred             hHHHHHHHhhccccccccccCChHHHHHHHHh--hHHHHHHHHhcCCCccccCCCChhHHhhhccc----CCHHHHHHHH
Q 007923          174 PELVALYQRHLLDILDKVVADDILVVLSVAHM--CGKACEKLLERCIEITVKSDIDIVTLDKTLPQ----HIVKQIIDLR  247 (585)
Q Consensus       174 ~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~--~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~----~~~~~i~~~L  247 (585)
                      .+.|++|++.+ +++.. ..+.|+++.+....  +.+++++|+++|+++|.+|..|.||||.|+..    .+..+++++|
T Consensus        18 ~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~L   95 (489)
T PHA02798         18 LSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKIL   95 (489)
T ss_pred             HHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHH
Confidence            45888898764 44444 34566665444443  78999999999999999999999999998761    2568999999


Q ss_pred             HHcCCCCCCCCCCCCCCChHHHHHHhCC---CHHHHHHHHhCCC----CCCCCchHHHHHHHcCC---HHHHHHHHhhCC
Q 007923          248 VELSLHRSESCGFPDKHTKRIHRALDSD---DVELVRMLLKEAH----TNLDDAHALHYAVAYCD---AKTTTELLDLGL  317 (585)
Q Consensus       248 l~~ga~in~~~~~d~~g~t~Lh~A~~~g---~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~---~~~v~~LL~~~~  317 (585)
                      +++|+|+|.   +|..|+||||+|+..+   +.+++++|+++|+    .|..|.||||+|+..|+   .+++++|++.| 
T Consensus        96 l~~GadiN~---~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g-  171 (489)
T PHA02798         96 IENGADINK---KNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKG-  171 (489)
T ss_pred             HHCCCCCCC---CCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhC-
Confidence            999999999   8999999999999875   7899999999994    67899999999999998   99999999997 


Q ss_pred             CCcccCC-CCCChHHHHHHHc----CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-cC-CCCcccccCcCCCCCcccc
Q 007923          318 ADVNHRN-SRGYTVLHVAAMR----KEPKIIVSLLTKGARPSDLTLDGRKALQISKR-LT-KAADYYIPTEEGKTTPKDR  390 (585)
Q Consensus       318 advn~~d-~~G~TpLh~Aa~~----g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~-~~-~~~~~~~~~~~g~t~~~~~  390 (585)
                      +|+|.++ ..|.||||.++..    ++.+++++|+++|++++..+..|.|+++-... .. ....            ...
T Consensus       172 adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~------------~~~  239 (489)
T PHA02798        172 VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKR------------FKK  239 (489)
T ss_pred             CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhccc------------chH
Confidence            9999985 5799999999765    48999999999999999999999999872211 00 0000            112


Q ss_pred             hHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923          391 LCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       391 ~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                      ..++++..++++|.+|..|.||||+|+..++.+++.++-..+......+..|+|||++|...++.+++..++.
T Consensus       240 ~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~  312 (489)
T PHA02798        240 NILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILN  312 (489)
T ss_pred             HHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHc
Confidence            3455677789999999999999999999888888888778888888899999999999999999998887766


No 30 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=7.6e-34  Score=316.19  Aligned_cols=314  Identities=20%  Similarity=0.191  Sum_probs=243.2

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .||||.|+..|..+++.+++.+|+.++..+..+.||+|.++..+..+++++|+++|+++..++..+.||+|+|.. .+..
T Consensus       243 l~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~-~g~~  321 (1143)
T KOG4177|consen  243 LTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASR-LGHE  321 (1143)
T ss_pred             ccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcc-cchH
Confidence            566666666666666666666666666666666666666666666666666666666666666666666666666 4666


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923          242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL  317 (585)
Q Consensus       242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~  317 (585)
                      ++++++++.++.++.   .+..|.||||+++..++.+++.+|...++    .+..|+||+|.|+.+|..+++++++..| 
T Consensus       322 ~i~~~~l~~~~~~~a---ar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~g-  397 (1143)
T KOG4177|consen  322 EIVHLLLQAGATPNA---ARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAG-  397 (1143)
T ss_pred             HHHHHHhhccCCccc---cCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhcc-
Confidence            666666666666666   56677777777777777776666666653    3467889999999999999999999888 


Q ss_pred             CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-----------CCCcccccCcCCCCC
Q 007923          318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT-----------KAADYYIPTEEGKTT  386 (585)
Q Consensus       318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~-----------~~~~~~~~~~~g~t~  386 (585)
                      +++|.++..|.||||.|+.+++.++|+.++++|++++..+..|.||+|+|+..+           .+.++|.....|.|+
T Consensus       398 a~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~  477 (1143)
T KOG4177|consen  398 ADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTP  477 (1143)
T ss_pred             CCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcc
Confidence            889999999999999999999999999999999999999999999999988876           366777777777775


Q ss_pred             c----------------------------------------ccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHH
Q 007923          387 P----------------------------------------KDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLY  426 (585)
Q Consensus       387 ~----------------------------------------~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~  426 (585)
                      +                                        ....+..+++.+++++.++..|.||||+|+..++..+++
T Consensus       478 Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~Vk  557 (1143)
T KOG4177|consen  478 LHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVK  557 (1143)
T ss_pred             hhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHH
Confidence            1                                        111234556778899999999999999999999999998


Q ss_pred             HHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccccccccCcCCccccCC-CCcccc
Q 007923          427 LENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTVDLN-EAPFKM  484 (585)
Q Consensus       427 l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~d~~-~~p~~~  484 (585)
                      .+-..++.....++.|+||||.|+..|+.+++.++..    .|+..+..|.+ .+|+.+
T Consensus       558 fLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk----~GA~vna~d~~g~TpL~i  612 (1143)
T KOG4177|consen  558 FLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLK----HGASVNAADLDGFTPLHI  612 (1143)
T ss_pred             HhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHH----cCCCCCcccccCcchhHH
Confidence            8888899999999999999999999999999999987    88888877766 355443


No 31 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.4e-32  Score=301.60  Aligned_cols=297  Identities=11%  Similarity=0.046  Sum_probs=236.4

Q ss_pred             hHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHH--HhhHHHHHHHHhcCCCccccCC---CC----------
Q 007923          163 EVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVA--HMCGKACEKLLERCIEITVKSD---ID----------  227 (585)
Q Consensus       163 t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a--~~~~~~~~~Ll~~g~din~~d~---~g----------  227 (585)
                      +++|+|+..+..+++++|+++|++++.++..|.||++++++  .++.+++++|+++|+++|.+|.   .|          
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~  184 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRN  184 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccc
Confidence            56788999999999999999999999999999999997766  4599999999999999987653   34          


Q ss_pred             -hhHHhhhccc----------CCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCH--HHHHHHHhCCC------
Q 007923          228 -IVTLDKTLPQ----------HIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDV--ELVRMLLKEAH------  288 (585)
Q Consensus       228 -~t~L~~A~~~----------~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~--~~v~~Ll~~g~------  288 (585)
                       .||||+|+..          .++.+++++|+++|+|+|.   +|..|+||||+|+..|+.  ++|++|++..+      
T Consensus       185 ~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~---~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d~~~~~~  261 (661)
T PHA02917        185 CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS---IDKNYCTALQYYIKSSHIDIDIVKLLMKGIDNTAYSY  261 (661)
T ss_pred             cccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc---CCCCCCcHHHHHHHcCCCcHHHHHHHHhCCccccccc
Confidence             5999999752          3578999999999999999   999999999999999985  89999986333      


Q ss_pred             -CCCCCchHHHHHHHcC---------CHHHHHHHHhhCCCCcc-------cCCC------------CCChHHHHHH---H
Q 007923          289 -TNLDDAHALHYAVAYC---------DAKTTTELLDLGLADVN-------HRNS------------RGYTVLHVAA---M  336 (585)
Q Consensus       289 -~d~~g~tpLh~A~~~g---------~~~~v~~LL~~~~advn-------~~d~------------~G~TpLh~Aa---~  336 (585)
                       .|..|.+|+|+|+..+         +.++|+.||+.| ++..       ..+.            .+.|+||.+.   .
T Consensus       262 ~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~G-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  340 (661)
T PHA02917        262 IDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENG-KPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMT  340 (661)
T ss_pred             ccCcccccchHHHHHHHhhccccccchHHHHHHHHhCC-CCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHH
Confidence             2346789999999521         678999999988 7642       1222            3445555444   3


Q ss_pred             cCC--HHHHHHHHHcCCCCCCCCCCCCCHHHH-------HHHcCCCCcccccCcCCCCCcccc-----------------
Q 007923          337 RKE--PKIIVSLLTKGARPSDLTLDGRKALQI-------SKRLTKAADYYIPTEEGKTTPKDR-----------------  390 (585)
Q Consensus       337 ~g~--~~iv~~Ll~~gad~~~~d~~G~TpL~~-------A~~~~~~~~~~~~~~~g~t~~~~~-----------------  390 (585)
                      .|.  .+++++|+++||++|.++.+|.|+...       .....++++++..+..|.||+..-                 
T Consensus       341 ~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~  420 (661)
T PHA02917        341 FGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKK  420 (661)
T ss_pred             cCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhh
Confidence            665  569999999999999999999987431       111235666666677798886321                 


Q ss_pred             -------------hHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhh-cCCcc
Q 007923          391 -------------LCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHL-DGTLE  456 (585)
Q Consensus       391 -------------~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~-~~~~~  456 (585)
                                   ...-++..|+++|.+|..|.||||+|+..++.+++.+.-..+......+..|+||||+|.. .++.+
T Consensus       421 ~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~  500 (661)
T PHA02917        421 GLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIE  500 (661)
T ss_pred             ccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHH
Confidence                         1123466788999999999999999999888888877777788888899999999999985 67888


Q ss_pred             ccccccc
Q 007923          457 FALDGIK  463 (585)
Q Consensus       457 ~~~~l~~  463 (585)
                      ++.++..
T Consensus       501 iv~~LL~  507 (661)
T PHA02917        501 LLKMLLC  507 (661)
T ss_pred             HHHHHHH
Confidence            8888776


No 32 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.98  E-value=4.7e-33  Score=309.92  Aligned_cols=354  Identities=17%  Similarity=0.113  Sum_probs=278.8

Q ss_pred             CCeeechhhhhhcccHHHHHhhcCCCCC-CCCcccccccccccccChhHHHHHHHHHhcCCccCCCCcc--------c--
Q 007923           73 GREVPVHRCILSSRSGFFKNVFAGTGKQ-RGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGV--------C--  141 (585)
Q Consensus        73 ~~~~~~Hr~iLaars~~f~~lf~~~~~~-~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v--------~--  141 (585)
                      ...+|.|-+..+.+-.+-+.+...+... .+..-....+-.....   ....+..+++.+...++...-        .  
T Consensus       274 r~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~---g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~  350 (1143)
T KOG4177|consen  274 RGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRL---GHEEIVHLLLQAGATPNAARTAGYTPLHLAAK  350 (1143)
T ss_pred             cccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhccc---chHHHHHHHhhccCCccccCcCCcccccHhhh
Confidence            4579999999998888888877654321 1100000001011111   133445555555443321100        0  


Q ss_pred             ----cccccccccccccCC-ccchhhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhc
Q 007923          142 ----VCVDDDACSHVACRP-AVDFMVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLER  216 (585)
Q Consensus       142 ----~cl~~~~~~~~~c~~-~idf~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~  216 (585)
                          +..... .....+.. ......||+|.|+.++..+.+++++.+|.+++.+...|.||++++...++..+++.++++
T Consensus       351 ~~~~~~~~~l-~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~  429 (1143)
T KOG4177|consen  351 EGQVEVAGAL-LEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKR  429 (1143)
T ss_pred             hhhHHHHHHh-hccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEecc
Confidence                001111 11111111 233347899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCChhHHhhhcccCC-HHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCC
Q 007923          217 CIEITVKSDIDIVTLDKTLPQHI-VKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNL  291 (585)
Q Consensus       217 g~din~~d~~g~t~L~~A~~~~~-~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~  291 (585)
                      |++++.++..|.||+|+|+. .+ ..++...+++.|+++|.   ....|.||||+|+..|+.++++.|++.+.    -..
T Consensus       430 gA~~~~~~~lG~T~lhvaa~-~g~~~~~~~~l~~~g~~~n~---~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~  505 (1143)
T KOG4177|consen  430 GASPNAKAKLGYTPLHVAAK-KGRYLQIARLLLQYGADPNA---VSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAK  505 (1143)
T ss_pred             CCChhhHhhcCCChhhhhhh-cccHhhhhhhHhhcCCCcch---hccccCcchhhhhccCCchHHHHhhhcCCccCccch
Confidence            99999999999999999999 56 89999999999999999   89999999999999999999999999884    336


Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923          292 DDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT  371 (585)
Q Consensus       292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~  371 (585)
                      .|.|+||.|...+...+++.++++| ++++.++.+|+||||.|+.+|+.++|++||++|||++.+++.|+||||.|+..|
T Consensus       506 ~~l~~lhla~~~~~v~~~~~l~~~g-a~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G  584 (1143)
T KOG4177|consen  506 KGLTPLHLAADEDTVKVAKILLEHG-ANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQG  584 (1143)
T ss_pred             hccchhhhhhhhhhHHHHHHHhhcC-CceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcC
Confidence            7899999999999999999999998 999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhh-----hhcCCCCCchhh
Q 007923          372 KAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLA-----KLLFPMEAKVIM  446 (585)
Q Consensus       372 ~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~-----~~L~~~~g~t~l  446 (585)
                      +...++.                |++.|+++|..|.+|.||||+|+..++..+..+.......     ....+..|.+|+
T Consensus       585 ~~~i~~L----------------Llk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~  648 (1143)
T KOG4177|consen  585 HNDIAEL----------------LLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPE  648 (1143)
T ss_pred             hHHHHHH----------------HHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChh
Confidence            8776655                7899999999999999999999996665554443333322     334567888898


Q ss_pred             HHhhh
Q 007923          447 DIVHL  451 (585)
Q Consensus       447 ~~A~~  451 (585)
                      +++..
T Consensus       649 ~v~e~  653 (1143)
T KOG4177|consen  649 DVAEE  653 (1143)
T ss_pred             hHHHH
Confidence            88833


No 33 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.98  E-value=4.3e-32  Score=280.43  Aligned_cols=208  Identities=15%  Similarity=0.116  Sum_probs=196.5

Q ss_pred             cchhhhHHHHHHhcChhHHHHHHHhh-ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccC-CCChhHHhhhc
Q 007923          158 VDFMVEVLYVSFAFQVPELVALYQRH-LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKS-DIDIVTLDKTL  235 (585)
Q Consensus       158 idf~~t~L~~A~~~~~~elv~~ll~~-g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d-~~g~t~L~~A~  235 (585)
                      .|...+-++.|+.+|..+-|+.+++. |.+++..|.+|-+++|+|+.+++.+++++|+++|++||... ..|.||||+|+
T Consensus        41 ~d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAa  120 (600)
T KOG0509|consen   41 EDSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAA  120 (600)
T ss_pred             cchhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHH
Confidence            44556778999999999999999998 99999999999999999999999999999999999999998 66999999999


Q ss_pred             ccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHH
Q 007923          236 PQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTE  311 (585)
Q Consensus       236 ~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~  311 (585)
                      . +|+..++++|+++|||++.   +|.+|.||||.|++.|+.-+|-+||.+|+    .|.+|+||||||+.+|+...+..
T Consensus       121 r-~G~~~vv~lLlqhGAdpt~---~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~  196 (600)
T KOG0509|consen  121 R-NGHISVVDLLLQHGADPTL---KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRR  196 (600)
T ss_pred             H-cCcHHHHHHHHHcCCCCce---ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHH
Confidence            9 8999999999999999999   99999999999999999999999999993    67899999999999999888999


Q ss_pred             HHhhCCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923          312 LLDLGLADVNHRN-SRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL  370 (585)
Q Consensus       312 LL~~~~advn~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~  370 (585)
                      ||+-+ +.++.+| ..|+||||+|+..|+.+++.+|++.|++.+.+|.+|.||+.+|...
T Consensus       197 LL~f~-a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  197 LLKFG-ASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHhc-ccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            99998 9999998 8999999999999999999988888899999999999999999876


No 34 
>PHA02730 ankyrin-like protein; Provisional
Probab=99.97  E-value=8.8e-31  Score=281.93  Aligned_cols=188  Identities=13%  Similarity=0.073  Sum_probs=159.7

Q ss_pred             HHHHHHHhhccccc-cccccCChHHHHHHHHh---hHHHHHHHHhcCCCccccCCCChhHHhhhcccC-CHHHHHHHHHH
Q 007923          175 ELVALYQRHLLDIL-DKVVADDILVVLSVAHM---CGKACEKLLERCIEITVKSDIDIVTLDKTLPQH-IVKQIIDLRVE  249 (585)
Q Consensus       175 elv~~ll~~g~~~~-~~~~~~~t~l~l~~a~~---~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~-~~~~i~~~Ll~  249 (585)
                      ..+++.++.-++++ .+|..|+||||+|+..+   +.+++++|+++|||++++|..|+||||+|+... ++.+++++|++
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~  100 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS  100 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence            46777888877888 78889999999999886   499999999999999999999999999998732 37999999999


Q ss_pred             cCCCC--CCCCCCCCCCChHHHHHHh--CCCHHHHHHHHhCC--C----CC----CCCchHHHHHHHcCCHHHHHHHHhh
Q 007923          250 LSLHR--SESCGFPDKHTKRIHRALD--SDDVELVRMLLKEA--H----TN----LDDAHALHYAVAYCDAKTTTELLDL  315 (585)
Q Consensus       250 ~ga~i--n~~~~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~g--~----~d----~~g~tpLh~A~~~g~~~~v~~LL~~  315 (585)
                      +|++.  +.   .+..+.+|||.++.  +++.++|++|+..+  +    .+    ..|.+|+++|+..++.++|++|++.
T Consensus       101 ~~~~~~~~~---~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~  177 (672)
T PHA02730        101 SYSNASNEL---TSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS  177 (672)
T ss_pred             cCCCCCccc---ccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHc
Confidence            97654  66   68889999999988  89999999999744  2    11    3689999999999999999999999


Q ss_pred             CCCCcc-------cCCCCCC-hHHHHH------HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Q 007923          316 GLADVN-------HRNSRGY-TVLHVA------AMRKEPKIIVSLLTKGARPSDLTLDGRKALQI  366 (585)
Q Consensus       316 ~~advn-------~~d~~G~-TpLh~A------a~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~  366 (585)
                      | ++++       ..+..+. |.||++      ...++.+++++|+++|||+|.+|.+|+||||+
T Consensus       178 g-~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~  241 (672)
T PHA02730        178 E-CYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQY  241 (672)
T ss_pred             C-CcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            8 9996       2444454 555534      45678999999999999999999999999995


No 35 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=4e-31  Score=273.28  Aligned_cols=203  Identities=17%  Similarity=0.146  Sum_probs=188.8

Q ss_pred             hHHHHHHHHhhHHHHHHHHhc-CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCC-CCCChHHHHHHh
Q 007923          196 ILVVLSVAHMCGKACEKLLER-CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFP-DKHTKRIHRALD  273 (585)
Q Consensus       196 t~l~l~~a~~~~~~~~~Ll~~-g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d-~~g~t~Lh~A~~  273 (585)
                      .....|+..|..+-++.|++. |.+++..|.+|.|+||+|+. ++..+++++|+++|++||.   .. ..|.||||||+.
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAi-NNrl~v~r~li~~gadvn~---~gG~l~stPLHWAar  121 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAI-NNRLDVARYLISHGADVNA---IGGVLGSTPLHWAAR  121 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHH-cCcHHHHHHHHHcCCCccc---cCCCCCCCcchHHHH
Confidence            346778888899999999999 99999999999999999999 8999999999999999999   44 678999999999


Q ss_pred             CCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 007923          274 SDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTK  349 (585)
Q Consensus       274 ~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~  349 (585)
                      +|+..+|++|+++|+    +|.+|.||||.|++.|+.-.|.+||..+ +|+|.+|.+|+||||+||.+|+...+..||+.
T Consensus       122 ~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f  200 (600)
T KOG0509|consen  122 NGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF  200 (600)
T ss_pred             cCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh
Confidence            999999999999995    7899999999999999999999999998 99999999999999999999999889999999


Q ss_pred             CCCCCCCC-CCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhh
Q 007923          350 GARPSDLT-LDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDD  419 (585)
Q Consensus       350 gad~~~~d-~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~  419 (585)
                      |+.++.+| ..|.||||+|+..|+...+..                +++.+++.+.+|.+|.||+.+|.+.
T Consensus       201 ~a~~~~~d~~~g~TpLHwa~~~gN~~~v~L----------------l~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  201 GASLLLTDDNHGNTPLHWAVVGGNLTAVKL----------------LLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccccccCCchHHHHHhcCCcceEeh----------------hhhcCCcccccccCCCCHHHHHHHh
Confidence            99999998 899999999999988777653                6667788889999999999999874


No 36 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97  E-value=2.7e-30  Score=256.04  Aligned_cols=148  Identities=16%  Similarity=0.102  Sum_probs=142.3

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .+||..|+..|+.++|++|+++|+++|..+....||+--|+.-|+.++++||+++|+|++..|..|.|.||+|+. .|+.
T Consensus        85 appLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~y-kGh~  163 (615)
T KOG0508|consen   85 APPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACY-KGHV  163 (615)
T ss_pred             CchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeec-cCch
Confidence            579999999999999999999999999998888899998999999999999999999999999999999999999 8999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC---CCCCCchHHHHHHHcCCHHHHHHHH
Q 007923          242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH---TNLDDAHALHYAVAYCDAKTTTELL  313 (585)
Q Consensus       242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~---~d~~g~tpLh~A~~~g~~~~v~~LL  313 (585)
                      +|+++|++.|+|+|.   ++.+|.|+||.|++.|+++++++|+++|+   +|..|.|||..|+..|+.++|..|+
T Consensus       164 ~I~qyLle~gADvn~---ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  164 DIAQYLLEQGADVNA---KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             HHHHHHHHhCCCcch---hcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHh
Confidence            999999999999999   99999999999999999999999999994   7888999999999999999999998


No 37 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96  E-value=2.1e-29  Score=259.58  Aligned_cols=186  Identities=14%  Similarity=0.081  Sum_probs=170.8

Q ss_pred             HHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCcc------ccCCCChhHHhhhcc-cCCHHHHHHHHH
Q 007923          176 LVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEIT------VKSDIDIVTLDKTLP-QHIVKQIIDLRV  248 (585)
Q Consensus       176 lv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din------~~d~~g~t~L~~A~~-~~~~~~i~~~Ll  248 (585)
                      +.++|+.+|++++....++     +++..+..+++++|+++|+++|      .++..++|+||.++. ..++.+++++|+
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            6789999999999988877     8888899999999999999999      888999999999987 238899999999


Q ss_pred             HcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-CC---------CCCchHHHHHHHcCCHHHHHHHHhhCCC
Q 007923          249 ELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-TN---------LDDAHALHYAVAYCDAKTTTELLDLGLA  318 (585)
Q Consensus       249 ~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d---------~~g~tpLh~A~~~g~~~~v~~LL~~~~a  318 (585)
                      ++|||++.   +  .+.||||+|+..|+.++|++|+++|+ .+         ..|.||+|.|+..++.++++.|+.+| +
T Consensus       139 ~~GADIn~---~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-A  212 (437)
T PHA02795        139 DHGAVIYK---I--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-E  212 (437)
T ss_pred             HCCCCCCC---C--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-C
Confidence            99999988   4  34899999999999999999999994 21         23678999999999999999999998 9


Q ss_pred             CcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 007923          319 DVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK  372 (585)
Q Consensus       319 dvn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  372 (585)
                      |+|.+|..|+||||+|+..|+.+++++|+++||+++.+|..|+||||+|+..|+
T Consensus       213 DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~  266 (437)
T PHA02795        213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS  266 (437)
T ss_pred             CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence            999999999999999999999999999999999999999999999999999875


No 38 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96  E-value=3.4e-29  Score=266.88  Aligned_cols=234  Identities=11%  Similarity=0.030  Sum_probs=174.4

Q ss_pred             HHHH-HHhcChhHHHHHHHhhccccccccccCChHHHHHHH-HhhHHHHHHHHhcCCCc---------------------
Q 007923          164 VLYV-SFAFQVPELVALYQRHLLDILDKVVADDILVVLSVA-HMCGKACEKLLERCIEI---------------------  220 (585)
Q Consensus       164 ~L~~-A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a-~~~~~~~~~Ll~~g~di---------------------  220 (585)
                      ++|+ |...+..|++++|+++|+++|.++..+.+++++|+. .++.+++++|+++|||+                     
T Consensus        74 ~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~  153 (631)
T PHA02792         74 IFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYY  153 (631)
T ss_pred             HHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccccc
Confidence            6655 667889999999999999999999988998888865 57999999999999873                     


Q ss_pred             ---------------cccCCCChhHHhhhcccCC-------HHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCC--C
Q 007923          221 ---------------TVKSDIDIVTLDKTLPQHI-------VKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSD--D  276 (585)
Q Consensus       221 ---------------n~~d~~g~t~L~~A~~~~~-------~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g--~  276 (585)
                                     |.+|..|.||||+|+. ++       ..+++++|+++|++++.   +|..|.||||+|+.+.  +
T Consensus       154 ~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~-~~s~~~~~~~~~v~k~Li~~g~~~~~---~d~~g~t~l~~~~~~~~i~  229 (631)
T PHA02792        154 NWDDELDDYDYDYTTDYDDRMGKTVLYYYII-TRSQDGYATSLDVINYLISHEKEMRY---YTYREHTTLYYYVDKCDIK  229 (631)
T ss_pred             chhhhccccccccccccCCCCCCchHHHHHh-hCCcccccCCHHHHHHHHhCCCCcCc---cCCCCChHHHHHHHcccch
Confidence                           2456679999999999 55       69999999999999999   8999999999999988  7


Q ss_pred             HHHHHHHHhCCC-----------------------CC-------------------------------------------
Q 007923          277 VELVRMLLKEAH-----------------------TN-------------------------------------------  290 (585)
Q Consensus       277 ~~~v~~Ll~~g~-----------------------~d-------------------------------------------  290 (585)
                      .|++++|++...                       +|                                           
T Consensus       230 ~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~  309 (631)
T PHA02792        230 REIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDL  309 (631)
T ss_pred             HHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHH
Confidence            777777765321                       00                                           


Q ss_pred             ---------------------------CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCC--ChHHHHHHHcCCH-
Q 007923          291 ---------------------------LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRG--YTVLHVAAMRKEP-  340 (585)
Q Consensus       291 ---------------------------~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G--~TpLh~Aa~~g~~-  340 (585)
                                                 ..+..++|.|+..|+.++|++|+..| ||+|.+|..|  .||||+|+..... 
T Consensus       310 l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~~n~~~~  388 (631)
T PHA02792        310 LSEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNG-NVVVEDDDNIINIMPLFPTLSIHESD  388 (631)
T ss_pred             HHHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcC-CchhhhcCCCCChhHHHHHHHhccHh
Confidence                                       01234456666666666666666665 6666666553  4666665554443 


Q ss_pred             --HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923          341 --KIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGD  418 (585)
Q Consensus       341 --~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~  418 (585)
                        +++++|+++|||+|.+|..|+||||+|+..++...+.                .|++.|+++|.++..|.||||+|+.
T Consensus       389 v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eive----------------lLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        389 VLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVE----------------WLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHH----------------HHHHCCCCCCCcCCCCCCHHHHHHH
Confidence              2456666666666666666666666666655444332                3688899999999999999999975


No 39 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96  E-value=5.6e-28  Score=257.63  Aligned_cols=274  Identities=9%  Similarity=0.016  Sum_probs=214.3

Q ss_pred             hhHHHHHHhcCh-hHHHHHHHhhccccccccccCChHHHHHHH-HhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCC
Q 007923          162 VEVLYVSFAFQV-PELVALYQRHLLDILDKVVADDILVVLSVA-HMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHI  239 (585)
Q Consensus       162 ~t~L~~A~~~~~-~elv~~ll~~g~~~~~~~~~~~t~l~l~~a-~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~  239 (585)
                      +||||.=....+ ..-+++++.-|..++..+-+|..++++-+. .++.+++++|+++|||+|.+++.|.||+|+|+...+
T Consensus        38 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~  117 (631)
T PHA02792         38 ETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNP  117 (631)
T ss_pred             CccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCC
Confidence            488887544333 234446666677778888888887766554 569999999999999999999999999999987679


Q ss_pred             HHHHHHHHHHcCCCCCC---------------------------------CCCCCCCCChHHHHHHhCC-------CHHH
Q 007923          240 VKQIIDLRVELSLHRSE---------------------------------SCGFPDKHTKRIHRALDSD-------DVEL  279 (585)
Q Consensus       240 ~~~i~~~Ll~~ga~in~---------------------------------~~~~d~~g~t~Lh~A~~~g-------~~~~  279 (585)
                      +.+++++|+++||+++.                                 .+..|..|.||||+|+.++       +.++
T Consensus       118 ~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v  197 (631)
T PHA02792        118 NVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDV  197 (631)
T ss_pred             ChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHH
Confidence            99999999999997432                                 0125667999999999999       8999


Q ss_pred             HHHHHhCCC----CCCCCchHHHHHHHcC--CHHHHHHHHh---------------------------------------
Q 007923          280 VRMLLKEAH----TNLDDAHALHYAVAYC--DAKTTTELLD---------------------------------------  314 (585)
Q Consensus       280 v~~Ll~~g~----~d~~g~tpLh~A~~~g--~~~~v~~LL~---------------------------------------  314 (585)
                      +++|+++|+    .|..|.||||+|+.+.  +.++++.|+.                                       
T Consensus       198 ~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~  277 (631)
T PHA02792        198 INYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGH  277 (631)
T ss_pred             HHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCC
Confidence            999999994    6788999999999977  5555555543                                       


Q ss_pred             ----------------------------------------------------hCCCCcccCCCCCChHHHHHHHcCCHHH
Q 007923          315 ----------------------------------------------------LGLADVNHRNSRGYTVLHVAAMRKEPKI  342 (585)
Q Consensus       315 ----------------------------------------------------~~~advn~~d~~G~TpLh~Aa~~g~~~i  342 (585)
                                                                          .| ++++  ...+..++|.||..|+.++
T Consensus       278 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~G-a~~~--r~~~~n~~~~Aa~~gn~eI  354 (631)
T PHA02792        278 DTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEG-ATLY--RFKHINKYFQKFDNRDPKV  354 (631)
T ss_pred             CccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCC-Cccc--cCCcchHHHHHHHcCCHHH
Confidence                                                                22 3322  1224567889999999999


Q ss_pred             HHHHHHcCCCCCCCCCCC--CCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh
Q 007923          343 IVSLLTKGARPSDLTLDG--RKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL  420 (585)
Q Consensus       343 v~~Ll~~gad~~~~d~~G--~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~  420 (585)
                      |++|+++|||++.+|.+|  .||||+|+.........             ....+++.++++|.+|..|.||||+|+..+
T Consensus       355 VelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~-------------IlklLIs~GADIN~kD~~G~TPLh~Aa~~~  421 (631)
T PHA02792        355 VEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLS-------------ILKLCKPYIDDINKIDKHGRSILYYCIESH  421 (631)
T ss_pred             HHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHH-------------HHHHHHhcCCccccccccCcchHHHHHHcC
Confidence            999999999999998875  58999876543322110             112246788999999999999999999988


Q ss_pred             hhHHHHHHhhhhhhhhcCCCCCchhhHHhhh
Q 007923          421 RMKLLYLENRVGLAKLLFPMEAKVIMDIVHL  451 (585)
Q Consensus       421 ~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~  451 (585)
                      +.+++.+.-..++.....+..|+|||++|..
T Consensus       422 n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        422 SVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            8888887777788878899999999999964


No 40 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=5.9e-28  Score=231.54  Aligned_cols=170  Identities=14%  Similarity=0.148  Sum_probs=133.0

Q ss_pred             CChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhccc-CCHHHHHHHHHHcCCCCCCCCCCC-CCCChHHHHH
Q 007923          194 DDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQ-HIVKQIIDLRVELSLHRSESCGFP-DKHTKRIHRA  271 (585)
Q Consensus       194 ~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~-~~~~~i~~~Ll~~ga~in~~~~~d-~~g~t~Lh~A  271 (585)
                      +.+|++.|+..++.++++.|++.   ++.+|..|.||||+|+.. .++.+++++|+++|+++|.   ++ ..|+||||+|
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~---~~~~~g~TpLh~a   94 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNF---KTRDNNLSALHHY   94 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc---cCCCCCCCHHHHH
Confidence            45667777777777777777754   455677777888877752 1367778888888888777   55 3677888877


Q ss_pred             HhC---CCHHHHHHHHhCCC----CCCCCchHHHHHHH--cCCHHHHHHHHhhCCCCcccCCCCCChHHHH-HHHcCCHH
Q 007923          272 LDS---DDVELVRMLLKEAH----TNLDDAHALHYAVA--YCDAKTTTELLDLGLADVNHRNSRGYTVLHV-AAMRKEPK  341 (585)
Q Consensus       272 ~~~---g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~--~g~~~~v~~LL~~~~advn~~d~~G~TpLh~-Aa~~g~~~  341 (585)
                      +..   ++.+++++|+++|+    .|..|.||||+|+.  .++.+++++|++.| +++|.+|..|.||||. |+..++.+
T Consensus        95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g-adin~~d~~g~t~Lh~~a~~~~~~~  173 (209)
T PHA02859         95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG-VSFLNKDFDNNNILYSYILFHSDKK  173 (209)
T ss_pred             HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC-CCcccccCCCCcHHHHHHHhcCCHH
Confidence            643   46778888887773    55677888888765  46789999999887 9999999999999996 56678999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923          342 IIVSLLTKGARPSDLTLDGRKALQISKRL  370 (585)
Q Consensus       342 iv~~Ll~~gad~~~~d~~G~TpL~~A~~~  370 (585)
                      ++++|+++|++++.+|..|+||||+|+..
T Consensus       174 iv~~Ll~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        174 IFDFLTSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence            99999999999999999999999999864


No 41 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95  E-value=2.4e-27  Score=244.38  Aligned_cols=187  Identities=13%  Similarity=0.067  Sum_probs=167.3

Q ss_pred             HHHhcChhHHHHHHHhhccccc------cccccCChHHHHHHH--HhhHHHHHHHHhcCCCccccCCCChhHHhhhcccC
Q 007923          167 VSFAFQVPELVALYQRHLLDIL------DKVVADDILVVLSVA--HMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQH  238 (585)
Q Consensus       167 ~A~~~~~~elv~~ll~~g~~~~------~~~~~~~t~l~l~~a--~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~  238 (585)
                      +|+..+..|++++|+++|++++      .++..++|+||.++.  .++.+++++|+++|||++.++  +.||||.|+. .
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~-~  159 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGIC-K  159 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHH-c
Confidence            7788999999999999999988      788889999999999  779999999999999999854  5899999999 7


Q ss_pred             CHHHHHHHHHHcCCCCCCCCCC---CCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHH
Q 007923          239 IVKQIIDLRVELSLHRSESCGF---PDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTE  311 (585)
Q Consensus       239 ~~~~i~~~Ll~~ga~in~~~~~---d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~  311 (585)
                      ++.+++++|+++|++++.....   +..|.|++|.|+..++.+++++|+++|+    .|..|.||||+|+..|+.+++++
T Consensus       160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVel  239 (437)
T PHA02795        160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSW  239 (437)
T ss_pred             CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence            9999999999999854431101   1347899999999999999999999994    66889999999999999999999


Q ss_pred             HHhhCCCCcccCCCCCChHHHHHHHcCC--------HHHHHHHHHcCCCCCCCC
Q 007923          312 LLDLGLADVNHRNSRGYTVLHVAAMRKE--------PKIIVSLLTKGARPSDLT  357 (585)
Q Consensus       312 LL~~~~advn~~d~~G~TpLh~Aa~~g~--------~~iv~~Ll~~gad~~~~d  357 (585)
                      |++.| +++|.+|..|+||||+|+.+|+        .+++++|+++|++++...
T Consensus       240 LL~~G-AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        240 LLENG-ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             HHHCC-CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            99988 9999999999999999999984        699999999999998754


No 42 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=6.7e-27  Score=224.22  Aligned_cols=170  Identities=16%  Similarity=0.222  Sum_probs=152.4

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHh--hHHHHHHHHhcCCCccccC-CCChhHHhhhccc-
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHM--CGKACEKLLERCIEITVKS-DIDIVTLDKTLPQ-  237 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~--~~~~~~~Ll~~g~din~~d-~~g~t~L~~A~~~-  237 (585)
                      .||||+|+..+..+.|+.|++.   ++..+..|.||+++++..+  +.+++++|+++|+++|.++ ..|+||||+|+.. 
T Consensus        22 ~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~   98 (209)
T PHA02859         22 CNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFN   98 (209)
T ss_pred             CcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhC
Confidence            6899999999999999999875   5677889999999988755  8899999999999999997 4899999998752 


Q ss_pred             -CCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHh--CCCHHHHHHHHhCCC----CCCCCchHHHH-HHHcCCHHHH
Q 007923          238 -HIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALD--SDDVELVRMLLKEAH----TNLDDAHALHY-AVAYCDAKTT  309 (585)
Q Consensus       238 -~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~g~----~d~~g~tpLh~-A~~~g~~~~v  309 (585)
                       .+..+++++|+++|+++|.   +|..|.||||+|+.  .++.+++++|++.|.    .|.+|.||||. |+..++.+++
T Consensus        99 ~~~~~eiv~~Ll~~gadin~---~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv  175 (209)
T PHA02859         99 KNVEPEILKILIDSGSSITE---EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIF  175 (209)
T ss_pred             ccccHHHHHHHHHCCCCCCC---cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHH
Confidence             2478999999999999999   99999999999986  468999999999993    67889999995 5678899999


Q ss_pred             HHHHhhCCCCcccCCCCCChHHHHHHHcC
Q 007923          310 TELLDLGLADVNHRNSRGYTVLHVAAMRK  338 (585)
Q Consensus       310 ~~LL~~~~advn~~d~~G~TpLh~Aa~~g  338 (585)
                      ++|++.| ++++.+|..|+||||+|+.++
T Consensus       176 ~~Ll~~G-adi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        176 DFLTSLG-IDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHcC-CCCCCCCCCCCCHHHHHhhhh
Confidence            9999987 999999999999999998764


No 43 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95  E-value=1.2e-27  Score=237.31  Aligned_cols=208  Identities=17%  Similarity=0.142  Sum_probs=179.0

Q ss_pred             HHHhcChhHHHHHHHhh-----ccccccccccCChHHHHHHHHhhHHHHHHHHhc-CCCccc--------cCCCChhHHh
Q 007923          167 VSFAFQVPELVALYQRH-----LLDILDKVVADDILVVLSVAHMCGKACEKLLER-CIEITV--------KSDIDIVTLD  232 (585)
Q Consensus       167 ~A~~~~~~elv~~ll~~-----g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~-g~din~--------~d~~g~t~L~  232 (585)
                      -|+..|....+..|+-.     -.+......+|.||+.+++.+|+.+++++|+++ ++++..        ....|-+||.
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW   89 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW   89 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence            45666666655554422     122234456788999999999999999999995 565433        2356889998


Q ss_pred             hhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHH
Q 007923          233 KTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKT  308 (585)
Q Consensus       233 ~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~  308 (585)
                      .|+. .|+.++|++|+++|++||.   ......|||--||.-|+.++|++|+++|+    .|..|.|.||+||..|+.++
T Consensus        90 aAsa-AGHl~vVk~L~~~ga~VN~---tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I  165 (615)
T KOG0508|consen   90 AASA-AGHLEVVKLLLRRGASVND---TTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDI  165 (615)
T ss_pred             HHhc-cCcHHHHHHHHHhcCcccc---ccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHH
Confidence            8888 7999999999999999999   77788899999999999999999999994    68999999999999999999


Q ss_pred             HHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccC
Q 007923          309 TTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPT  380 (585)
Q Consensus       309 v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~  380 (585)
                      +++||+.| +|+|.++..|+|+||.++..|+++|+++|+.+|+.+. +|..|.|||..|+..|+..+++.+.
T Consensus       166 ~qyLle~g-ADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  166 AQYLLEQG-ADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             HHHHHHhC-CCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHh
Confidence            99999998 9999999999999999999999999999999999885 5677999999999999998887765


No 44 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93  E-value=2.3e-25  Score=255.15  Aligned_cols=175  Identities=15%  Similarity=0.136  Sum_probs=163.9

Q ss_pred             cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHH
Q 007923          191 VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHR  270 (585)
Q Consensus       191 ~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~  270 (585)
                      +..+.++++.|+..|+.++++.|+++|+|+|.+|..|.||||+|+. .++.+++++|+++|+++|.   +|..|+||||+
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~-~g~~~~v~~Ll~~gadin~---~d~~G~TpL~~  597 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAAS-KGYEDCVLVLLKHACNVHI---RDANGNTALWN  597 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cChHHHHHHHHhcCCCCCC---cCCCCCCHHHH
Confidence            3345678888999999999999999999999999999999999999 7999999999999999999   89999999999


Q ss_pred             HHhCCCHHHHHHHHhCCC--CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923          271 ALDSDDVELVRMLLKEAH--TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT  348 (585)
Q Consensus       271 A~~~g~~~~v~~Ll~~g~--~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~  348 (585)
                      |+..|+.+++++|++.++  -...|.+|||+|+..|+.++++.|++.| +|+|.+|.+|+||||+|+..|+.+++++|++
T Consensus       598 A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~G-adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~  676 (823)
T PLN03192        598 AISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQG-LNVDSEDHQGATALQVAMAEDHVDMVRLLIM  676 (823)
T ss_pred             HHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence            999999999999999884  2356789999999999999999999998 9999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCC-CCHHHHHHHc
Q 007923          349 KGARPSDLTLDG-RKALQISKRL  370 (585)
Q Consensus       349 ~gad~~~~d~~G-~TpL~~A~~~  370 (585)
                      +|||++..|.+| .||+.++...
T Consensus       677 ~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        677 NGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             cCCCCCCCCCCCCCCHHHHHHHH
Confidence            999999999988 9999988653


No 45 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=5.2e-26  Score=205.02  Aligned_cols=232  Identities=13%  Similarity=0.029  Sum_probs=177.6

Q ss_pred             CChHHHHHHHHhhHHHHHHHHhcCCC-ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923          194 DDILVVLSVAHMCGKACEKLLERCIE-ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL  272 (585)
Q Consensus       194 ~~t~l~l~~a~~~~~~~~~Ll~~g~d-in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~  272 (585)
                      |...+.-+...++.+++..++..+.+ +...+..|+.+++.+++ .++...+..++.+|+..|.   .+.-+++|+.+++
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap-~~s~~k~sttltN~~rgne---vs~~p~s~~slsV  137 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAP-CGSVDKVSTTLTNGARGNE---VSLMPWSPLSLSV  137 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCC-CCCcceeeeeecccccCCc---cccccCChhhHHH
Confidence            33334555666666666666655554 44456668888888888 6788888888888888888   7888888888888


Q ss_pred             hCCCHHHHHHHHhCC--CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 007923          273 DSDDVELVRMLLKEA--HTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG  350 (585)
Q Consensus       273 ~~g~~~~v~~Ll~~g--~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g  350 (585)
                      ...+++.+..|.++.  +.|..|.|||.||+.+|+.++|++||+.| ||++...+...|+|.+|+..|..+||++||+++
T Consensus       138 hql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~~lgk~resALsLAt~ggytdiV~lLL~r~  216 (296)
T KOG0502|consen  138 HQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSG-ADPDALGKYRESALSLATRGGYTDIVELLLTRE  216 (296)
T ss_pred             HHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcC-CChhhhhhhhhhhHhHHhcCChHHHHHHHHhcC
Confidence            888888887777766  47788888888888888888888888887 888888888888888888888888888888888


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhh
Q 007923          351 ARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENR  430 (585)
Q Consensus       351 ad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~  430 (585)
                      .|+|..|.+|-|||-+|++-+|...+.                .||+.|++++..+..|.+++..|+..+.- +++.-..
T Consensus       217 vdVNvyDwNGgTpLlyAvrgnhvkcve----------------~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie  279 (296)
T KOG0502|consen  217 VDVNVYDWNGGTPLLYAVRGNHVKCVE----------------SLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIE  279 (296)
T ss_pred             CCcceeccCCCceeeeeecCChHHHHH----------------HHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHH
Confidence            888888888888888888766655443                37788888888888888888888875554 4444445


Q ss_pred             hhhhhhcCCCCCchhhH
Q 007923          431 VGLAKLLFPMEAKVIMD  447 (585)
Q Consensus       431 ~~~~~~L~~~~g~t~l~  447 (585)
                      .-+.+++.+.+-++|+|
T Consensus       280 ~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  280 KHALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHHHHhhcccCCCCCC
Confidence            55667777777777765


No 46 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.92  E-value=1.9e-25  Score=238.89  Aligned_cols=281  Identities=12%  Similarity=0.063  Sum_probs=244.1

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCcccc-CCCChhHHhhhcccCCH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVK-SDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~-d~~g~t~L~~A~~~~~~  240 (585)
                      .|+|-.||..|+.|++++|+.+|+++..+|..|.+++++++-+++..+|+.|+.+.+++.++ |..+.|+|-+||. .+.
T Consensus       758 ~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs-ggr  836 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS-GGR  836 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC-CCc
Confidence            67899999999999999999999999999999999999999999999999999999999885 5679999999999 899


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-CC-----CCCchHHHHHHHcCCHHHHHHHHh
Q 007923          241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-TN-----LDDAHALHYAVAYCDAKTTTELLD  314 (585)
Q Consensus       241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d-----~~g~tpLh~A~~~g~~~~v~~LL~  314 (585)
                      .++|++||.+|++-..   ++....|||.+|...|..++|.+|+.+|. +|     ..|..||++|...|+...++.||+
T Consensus       837 ~~vvelLl~~gankeh---rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~  913 (2131)
T KOG4369|consen  837 TRVVELLLNAGANKEH---RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQ  913 (2131)
T ss_pred             chHHHHHHHhhccccc---cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhc
Confidence            9999999999999888   89999999999999999999999999994 55     568999999999999999999999


Q ss_pred             hCCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHH
Q 007923          315 LGLADVNHRN-SRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCI  393 (585)
Q Consensus       315 ~~~advn~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~  393 (585)
                      .| .|+|+.- .+-+|+|-+|+..|+.++|.+||.+.+++..+-+.|.|||+-++..|....-+.               
T Consensus       914 ~g-sdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~---------------  977 (2131)
T KOG4369|consen  914 PG-SDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNL---------------  977 (2131)
T ss_pred             cc-chhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchh---------------
Confidence            98 9999874 467899999999999999999999999999999999999999998877555444               


Q ss_pred             HHHHhhhhcCCc--ccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923          394 EILEQAERRDPL--LREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK  463 (585)
Q Consensus       394 ~ll~~~~~~n~~--~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~  463 (585)
                       ||..|+|.|.-  -..-.|+|.++++.+|.+.+.++.+.+....+.|+.|.|+|.+|+..|....+.++..
T Consensus       978 -li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~ 1048 (2131)
T KOG4369|consen  978 -LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVS 1048 (2131)
T ss_pred             -hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhh
Confidence             56666666542  2334577777777777777766666666666777777777777777777777766655


No 47 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.92  E-value=1.7e-24  Score=246.47  Aligned_cols=240  Identities=16%  Similarity=0.079  Sum_probs=169.2

Q ss_pred             cCChHHHHHHHHhhHHHHHHHHhc--CCCccccCCCChhHHh-hhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHH
Q 007923          193 ADDILVVLSVAHMCGKACEKLLER--CIEITVKSDIDIVTLD-KTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIH  269 (585)
Q Consensus       193 ~~~t~l~l~~a~~~~~~~~~Ll~~--g~din~~d~~g~t~L~-~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh  269 (585)
                      .++..+..|+..|+.+.++.++++  +.++|..|..|.|||| .|+. +++.+++++|+++|+       .+..|.||||
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~-~~~~eiv~lLl~~g~-------~~~~G~T~Lh   87 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIE-NENLELTELLLNLSC-------RGAVGDTLLH   87 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHh-cChHHHHHHHHhCCC-------CCCcChHHHH
Confidence            345667778888888888888887  7888888888888888 5555 788888888888876       2567888888


Q ss_pred             HHHhCC---CHHHHHHHHhCCC--------------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCC--------
Q 007923          270 RALDSD---DVELVRMLLKEAH--------------TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRN--------  324 (585)
Q Consensus       270 ~A~~~g---~~~~v~~Ll~~g~--------------~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d--------  324 (585)
                      .|+..+   ...++..++..+.              .+..|.||||+|+..|+.++|+.||+.| +++|.++        
T Consensus        88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~G-Adv~~~~~~~~~~~~  166 (743)
T TIGR00870        88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERG-ASVPARACGDFFVKS  166 (743)
T ss_pred             HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCC-CCCCcCcCCchhhcC
Confidence            887622   2233344443331              1246899999999999999999999987 9998763        


Q ss_pred             ------CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHH---
Q 007923          325 ------SRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEI---  395 (585)
Q Consensus       325 ------~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~l---  395 (585)
                            ..|.||||+|+..|+++++++|+++|+|++.+|..|+||||+|+..+.....+.        .....|.++   
T Consensus       167 ~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~--------~l~~~~~~~l~~  238 (743)
T TIGR00870       167 QGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYE--------ELSCQMYNFALS  238 (743)
T ss_pred             CCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHH--------HHHHHHHHHHHH
Confidence                  368999999999999999999999999999999999999999998653221110        001112222   


Q ss_pred             -HHhhhhc----CCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHh
Q 007923          396 -LEQAERR----DPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIV  449 (585)
Q Consensus       396 -l~~~~~~----n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A  449 (585)
                       +....+.    +..|.+|.||||+|+..++.++..+.-..+.-..-.......|.+.+
T Consensus       239 ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~  297 (743)
T TIGR00870       239 LLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLS  297 (743)
T ss_pred             HHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHh
Confidence             2232233    66789999999999996666665544333322222233444555544


No 48 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91  E-value=4e-24  Score=243.47  Aligned_cols=212  Identities=14%  Similarity=0.073  Sum_probs=174.7

Q ss_pred             hhHHHHHHhcChhHHHHHHHhh--ccccccccccCChHHH-HHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcc--
Q 007923          162 VEVLYVSFAFQVPELVALYQRH--LLDILDKVVADDILVV-LSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLP--  236 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~--g~~~~~~~~~~~t~l~-l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~--  236 (585)
                      .+.++.|+..|..+.++.+++.  +.++|..|..|.||++ .|+..++.+++++|+++|+    .+..|.||||.|+.  
T Consensus        18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~   93 (743)
T TIGR00870        18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEY   93 (743)
T ss_pred             HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhcc
Confidence            5789999999999999999988  8999999999999999 7777779999999999987    67789999999987  


Q ss_pred             cCCHHHHHHHHHHcCCC------CCC-CCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-CC-----------------C
Q 007923          237 QHIVKQIIDLRVELSLH------RSE-SCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-TN-----------------L  291 (585)
Q Consensus       237 ~~~~~~i~~~Ll~~ga~------in~-~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d-----------------~  291 (585)
                      ..+...++.++...+.+      ++. .......|.||||+|+..|+.++|++|+++|+ ++                 .
T Consensus        94 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~  173 (743)
T TIGR00870        94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFY  173 (743)
T ss_pred             HHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCccc
Confidence            12234455555555432      111 00123579999999999999999999999994 43                 2


Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcC---------CHHHHHHHHHcCCCC-------CC
Q 007923          292 DDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRK---------EPKIIVSLLTKGARP-------SD  355 (585)
Q Consensus       292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g---------~~~iv~~Ll~~gad~-------~~  355 (585)
                      .|.||||+|+..|+.+++++|++.| +|+|.+|..|+||||+|+..+         ...+.+++++.+++.       +.
T Consensus       174 ~g~tpL~~Aa~~~~~~iv~lLl~~g-adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i  252 (743)
T TIGR00870       174 HGESPLNAAACLGSPSIVALLSEDP-ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI  252 (743)
T ss_pred             ccccHHHHHHHhCCHHHHHHHhcCC-cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence            4899999999999999999999987 999999999999999999987         234667777766654       67


Q ss_pred             CCCCCCCHHHHHHHcCCCCcccc
Q 007923          356 LTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       356 ~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      .|.+|.||||+|+..|+...+..
T Consensus       253 ~N~~g~TPL~~A~~~g~~~l~~l  275 (743)
T TIGR00870       253 LNHQGLTPLKLAAKEGRIVLFRL  275 (743)
T ss_pred             cCCCCCCchhhhhhcCCccHHHH
Confidence            79999999999999988876655


No 49 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=3.7e-25  Score=199.55  Aligned_cols=224  Identities=15%  Similarity=0.051  Sum_probs=187.6

Q ss_pred             HHHhcChhHHHHHHHhhc-cccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHH
Q 007923          167 VSFAFQVPELVALYQRHL-LDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIID  245 (585)
Q Consensus       167 ~A~~~~~~elv~~ll~~g-~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~  245 (585)
                      .+...++.++......-. --+...+.+|...++.+.-+++...+..+|.+|+..|..+-.+++|+.+++. ..+.+.+.
T Consensus        68 ~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVh-ql~L~~~~  146 (296)
T KOG0502|consen   68 VAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVH-QLHLDVVD  146 (296)
T ss_pred             hhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHH-HHHHHHHH
Confidence            345566666555443222 2234556668887777766778888889999999999999999999999998 56776666


Q ss_pred             HHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-CC---CCCchHHHHHHHcCCHHHHHHHHhhCCCCcc
Q 007923          246 LRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-TN---LDDAHALHYAVAYCDAKTTTELLDLGLADVN  321 (585)
Q Consensus       246 ~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d---~~g~tpLh~A~~~g~~~~v~~LL~~~~advn  321 (585)
                      .+.+.  .+|.   .|+.|.|||+||+.+|++++|++||+.|+ ++   ....|+|.+|+..|..++|++||..+ .|||
T Consensus       147 ~~~~n--~VN~---~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~-vdVN  220 (296)
T KOG0502|consen  147 LLVNN--KVNA---CDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTRE-VDVN  220 (296)
T ss_pred             HHhhc--cccC---ccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcC-CCcc
Confidence            66544  5677   89999999999999999999999999994 44   55579999999999999999999998 9999


Q ss_pred             cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhh
Q 007923          322 HRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAER  401 (585)
Q Consensus       322 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~  401 (585)
                      ..|.+|-|||-+|+..||.+||+.||..|||++..+..|++++..|+..|+. .+                ..+++..+.
T Consensus       221 vyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~V----------------qqvie~h~l  283 (296)
T KOG0502|consen  221 VYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IV----------------QQVIEKHAL  283 (296)
T ss_pred             eeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HH----------------HHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998765 23                347888888


Q ss_pred             cCCcccCCCCHHH
Q 007923          402 RDPLLREASHSFA  414 (585)
Q Consensus       402 ~n~~~~~g~t~Lh  414 (585)
                      .+.+|..-.||+|
T Consensus       284 kl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  284 KLCQDSEKRTPLH  296 (296)
T ss_pred             HHhhcccCCCCCC
Confidence            8888888888875


No 50 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90  E-value=9e-24  Score=221.06  Aligned_cols=204  Identities=17%  Similarity=0.091  Sum_probs=192.0

Q ss_pred             hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923          161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~  240 (585)
                      ..|+||.|+..|+.+++++|+++-+-++..+..|.+|+++|++.|+.++++.|+.++..+|+.+..|.||||.|++ +++
T Consensus        49 gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaq-hgh  127 (854)
T KOG0507|consen   49 GFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQ-HGH  127 (854)
T ss_pred             chhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhh-hcc
Confidence            3789999999999999999999988888888999999999999999999999999999999999999999999999 899


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-C-----------CCCCCchHHHHHHHcCCHHH
Q 007923          241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-H-----------TNLDDAHALHYAVAYCDAKT  308 (585)
Q Consensus       241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~-----------~d~~g~tpLh~A~~~g~~~~  308 (585)
                      .+++.+|+++|+|.-.   +++.+.|+|-.|++.|..++|++|++.. .           .+..+.+|||+|+++|+.++
T Consensus       128 ~dvv~~Ll~~~adp~i---~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~  204 (854)
T KOG0507|consen  128 LEVVFYLLKKNADPFI---RNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVEC  204 (854)
T ss_pred             hHHHHHHHhcCCCccc---cCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHH
Confidence            9999999999999999   8999999999999999999999999873 1           33567899999999999999


Q ss_pred             HHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923          309 TTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL  370 (585)
Q Consensus       309 v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~  370 (585)
                      ++.|+..| .|+|.....| |+||.|+..|..++|.+|++-|.+.+.+|.+|+|+|.+-...
T Consensus       205 ~~~ll~ag-~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  205 MQALLEAG-FDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDL  264 (854)
T ss_pred             HHHHHhcC-CCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhc
Confidence            99999998 9999998887 899999999999999999999999999999999999987764


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=8.3e-23  Score=234.11  Aligned_cols=185  Identities=16%  Similarity=0.080  Sum_probs=161.6

Q ss_pred             HHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC
Q 007923          209 ACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH  288 (585)
Q Consensus       209 ~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~  288 (585)
                      +-..+.+.+..  ..+..+.++||.|+. .|+.++++.|++.|+++|.   .|..|.||||+|+..|+.+++++|+++|+
T Consensus       509 v~~ll~~~~~~--~~~~~~~~~L~~Aa~-~g~~~~l~~Ll~~G~d~n~---~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga  582 (823)
T PLN03192        509 VGDLLGDNGGE--HDDPNMASNLLTVAS-TGNAALLEELLKAKLDPDI---GDSKGRTPLHIAASKGYEDCVLVLLKHAC  582 (823)
T ss_pred             HHHHHhhcccc--cCCccchhHHHHHHH-cCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcChHHHHHHHHhcCC
Confidence            33455555443  234457899999999 7999999999999999999   89999999999999999999999999993


Q ss_pred             ----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Q 007923          289 ----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKAL  364 (585)
Q Consensus       289 ----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL  364 (585)
                          .|.+|+||||+|+..|+.++++.|+..+ +..+  ...|.||||+|+..|+.+++++|+++|+|+|.+|.+|+|||
T Consensus       583 din~~d~~G~TpL~~A~~~g~~~iv~~L~~~~-~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpL  659 (823)
T PLN03192        583 NVHIRDANGNTALWNAISAKHHKIFRILYHFA-SISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL  659 (823)
T ss_pred             CCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcC-cccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence                5788999999999999999999999766 5544  34678999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCC-CCHHHHHHh
Q 007923          365 QISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREA-SHSFAMAGD  418 (585)
Q Consensus       365 ~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g-~t~Lh~A~~  418 (585)
                      |+|+..|+...+..                |++.|++++..+..| .||++++..
T Consensus       660 h~A~~~g~~~iv~~----------------Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        660 QVAMAEDHVDMVRL----------------LIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHHHCCcHHHHHH----------------HHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            99999887765544                789999999999988 999998874


No 52 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89  E-value=2e-23  Score=201.45  Aligned_cols=152  Identities=22%  Similarity=0.208  Sum_probs=140.9

Q ss_pred             ccccCCCChhHHhhhcccCCHHHHHHHHHHcCC-CCCCCCCCCCCCChHHHHHHh-----CCCHHHHHHHHhCCCCC---
Q 007923          220 ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSL-HRSESCGFPDKHTKRIHRALD-----SDDVELVRMLLKEAHTN---  290 (585)
Q Consensus       220 in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga-~in~~~~~d~~g~t~Lh~A~~-----~g~~~~v~~Ll~~g~~d---  290 (585)
                      ||..|.+|+|+||||+. |.++++|+.||+.|. +++.   ++.-|+||+++|+.     ..+.++|.-|...|++|   
T Consensus       261 VNlaDsNGNTALHYsVS-HaNF~VV~~LLDSgvC~VD~---qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKA  336 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVS-HANFDVVSILLDSGVCDVDQ---QNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKA  336 (452)
T ss_pred             hhhhcCCCCeeeeeeec-ccchHHHHHHhccCcccccc---cccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhh
Confidence            68899999999999999 899999999999985 8998   89999999999985     35789999999999887   


Q ss_pred             -CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH
Q 007923          291 -LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTK-GARPSDLTLDGRKALQISK  368 (585)
Q Consensus       291 -~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-gad~~~~d~~G~TpL~~A~  368 (585)
                       ..|.|+|++|+.+|+.++|+.||.-| ||||.+|.+|-|+|++||.+||.+||++||.. ++|+...|.+|-|+|.+|.
T Consensus       337 sQ~gQTALMLAVSHGr~d~vk~LLacg-AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAl  415 (452)
T KOG0514|consen  337 SQHGQTALMLAVSHGRVDMVKALLACG-ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIAL  415 (452)
T ss_pred             hhhcchhhhhhhhcCcHHHHHHHHHcc-CCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHH
Confidence             56999999999999999999999887 99999999999999999999999999999985 6799999999999999999


Q ss_pred             HcCCCCcc
Q 007923          369 RLTKAADY  376 (585)
Q Consensus       369 ~~~~~~~~  376 (585)
                      ..||..+-
T Consensus       416 eagh~eIa  423 (452)
T KOG0514|consen  416 EAGHREIA  423 (452)
T ss_pred             hcCchHHH
Confidence            99887643


No 53 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89  E-value=4.1e-23  Score=209.58  Aligned_cols=200  Identities=18%  Similarity=0.102  Sum_probs=172.4

Q ss_pred             HHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHH
Q 007923          165 LYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQII  244 (585)
Q Consensus       165 L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~  244 (585)
                      +.-|+..+..+-++.|+..|++++..+.+|.|++|-++...+.++|++|+++|++||..|..||||||.|+. .++..|+
T Consensus        44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaas-cg~~~i~  122 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAAS-CGYLNIV  122 (527)
T ss_pred             HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcc-cccHHHH
Confidence            455777888999999999999999999999999999999999999999999999999999999999999999 7999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCChHHHHHHhCCC--------------HHH------------HHHHHhCCC----CCCCCc
Q 007923          245 DLRVELSLHRSESCGFPDKHTKRIHRALDSDD--------------VEL------------VRMLLKEAH----TNLDDA  294 (585)
Q Consensus       245 ~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~--------------~~~------------v~~Ll~~g~----~d~~g~  294 (585)
                      ++|+++|+++-.   .+..|..|+-.|...-.              ++.            +...+..|.    .+..|.
T Consensus       123 ~~li~~gA~~~a---vNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~  199 (527)
T KOG0505|consen  123 EYLIQHGANLLA---VNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA  199 (527)
T ss_pred             HHHHHhhhhhhh---ccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence            999999998766   56666666543322111              111            223344552    345599


Q ss_pred             hHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923          295 HALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR  369 (585)
Q Consensus       295 tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~  369 (585)
                      |.||.|+..|..++.++||..| .+++.+|.+||||||.||..|..+++++|+++|++.+..+..|.||+.+|..
T Consensus       200 T~lHvAaa~Gy~e~~~lLl~ag-~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  200 TALHVAAANGYTEVAALLLQAG-YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             hHHHHHHhhhHHHHHHHHHHhc-cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            9999999999999999999998 9999999999999999999999999999999999999999999999998876


No 54 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89  E-value=1.3e-22  Score=187.36  Aligned_cols=144  Identities=12%  Similarity=0.014  Sum_probs=126.2

Q ss_pred             hcCCCccccCCCChhHHhhhcccCCHH----HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHH---HHHHHhCC
Q 007923          215 ERCIEITVKSDIDIVTLDKTLPQHIVK----QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVEL---VRMLLKEA  287 (585)
Q Consensus       215 ~~g~din~~d~~g~t~L~~A~~~~~~~----~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~---v~~Ll~~g  287 (585)
                      .+|++++..+..+.++||.|+. .+..    +++++|++.|++++.   +|..|+||||+|+..|+.+.   +++|++.|
T Consensus         8 ~~~~~~~~~~~~~~~~l~~a~~-~g~~~~l~~~~~~l~~~g~~~~~---~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G   83 (166)
T PHA02743          8 GNNLGAVEIDEDEQNTFLRICR-TGNIYELMEVAPFISGDGHLLHR---YDHHGRQCTHMVAWYDRANAVMKIELLVNMG   83 (166)
T ss_pred             ccchHHhhhccCCCcHHHHHHH-cCCHHHHHHHHHHHhhcchhhhc---cCCCCCcHHHHHHHhCccCHHHHHHHHHHcC
Confidence            3578888889899999999998 4554    667788899999998   89999999999999987654   89999999


Q ss_pred             C----CC-CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 007923          288 H----TN-LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRK  362 (585)
Q Consensus       288 ~----~d-~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~T  362 (585)
                      +    .+ ..|.||||+|+..|+.+++++|+...|++++.+|..|+||||+|+..++.+++++|+++|++++.++..|..
T Consensus        84 adin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         84 ADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            3    34 469999999999999999999996434999999999999999999999999999999999999999988753


No 55 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89  E-value=1.1e-22  Score=213.06  Aligned_cols=233  Identities=18%  Similarity=0.077  Sum_probs=208.0

Q ss_pred             HHHHHHhcChhHHHHHHHhh-------------ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhH
Q 007923          164 VLYVSFAFQVPELVALYQRH-------------LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVT  230 (585)
Q Consensus       164 ~L~~A~~~~~~elv~~ll~~-------------g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~  230 (585)
                      -|.-|+..+..+.+..|+++             ...++.+|.+|.|.+|.|+..++.+++++|+++.+-++..|..|.+|
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~p   85 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILP   85 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcce
Confidence            35678888999988888842             24567888899999999999999999999999999999999999999


Q ss_pred             HhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCH
Q 007923          231 LDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDA  306 (585)
Q Consensus       231 L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~  306 (585)
                      ||+|++ .|+.+++++|+.++..+|.   .+..|.||||.|++.|+.++|.+|+++|+    .|..+.|+|-.|++.|..
T Consensus        86 lhlaaw-~g~~e~vkmll~q~d~~na---~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~  161 (854)
T KOG0507|consen   86 LHLAAW-NGNLEIVKMLLLQTDILNA---VNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRA  161 (854)
T ss_pred             EEehhh-cCcchHHHHHHhcccCCCc---ccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhh
Confidence            999999 8999999999999988898   89999999999999999999999999994    788999999999999999


Q ss_pred             HHHHHHHhhCCCCc--------ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          307 KTTTELLDLGLADV--------NHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       307 ~~v~~LL~~~~adv--------n~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      ++|+.|+... .++        ..++-.+-+|||.|+.+||.++++.|++.|.|+|....+| |+||.|+..|....+..
T Consensus       162 ~Vvq~ll~~~-~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~  239 (854)
T KOG0507|consen  162 EVVQMLLQKK-FPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRF  239 (854)
T ss_pred             HHHHHHhhhc-cchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhH
Confidence            9999999873 332        2345678899999999999999999999999999998876 89999999888776654


Q ss_pred             cCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923          379 PTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGD  418 (585)
Q Consensus       379 ~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~  418 (585)
                                      +|+.|.+...++.+|.|+|.+-.+
T Consensus       240 ----------------ll~~gin~h~~n~~~qtaldil~d  263 (854)
T KOG0507|consen  240 ----------------LLEIGINTHIKNQHGQTALDIIID  263 (854)
T ss_pred             ----------------HHhhccccccccccchHHHHHHHh
Confidence                            788899999999999999988775


No 56 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88  E-value=1.2e-22  Score=206.31  Aligned_cols=215  Identities=19%  Similarity=0.209  Sum_probs=176.9

Q ss_pred             HHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHH
Q 007923          201 SVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELV  280 (585)
Q Consensus       201 ~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v  280 (585)
                      |+..+..+=++.|+..|+++|..+.+|.|+||-++. ..+.+||++|+++|++||.   .|..||||||.|+..|+..++
T Consensus        47 A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~i-d~~~e~v~~l~e~ga~Vn~---~d~e~wtPlhaaascg~~~i~  122 (527)
T KOG0505|consen   47 ACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACI-DDNLEMVKFLVENGANVNA---QDNEGWTPLHAAASCGYLNIV  122 (527)
T ss_pred             ccccccHHHHHHHhccCCCccccCCccchhHHHHHh-cccHHHHHHHHHhcCCccc---cccccCCcchhhcccccHHHH
Confidence            444557778899999999999999999999999999 7999999999999999999   999999999999999999999


Q ss_pred             HHHHhCCC----CCCCCchHHHHHHH-------------cC-C------------HHHHHHHHhhCCCCcccCCCCCChH
Q 007923          281 RMLLKEAH----TNLDDAHALHYAVA-------------YC-D------------AKTTTELLDLGLADVNHRNSRGYTV  330 (585)
Q Consensus       281 ~~Ll~~g~----~d~~g~tpLh~A~~-------------~g-~------------~~~v~~LL~~~~advn~~d~~G~Tp  330 (585)
                      ++|+++|+    +|.+|..|+-.+..             .| .            ..-+...+..| ...+..+..|-|.
T Consensus       123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G-~~~d~~~~rG~T~  201 (527)
T KOG0505|consen  123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAG-AELDARHARGATA  201 (527)
T ss_pred             HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcc-ccccccccccchH
Confidence            99999994    66666555433221             11 0            11234455555 8888998889999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCC
Q 007923          331 LHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREAS  410 (585)
Q Consensus       331 Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~  410 (585)
                      ||+|+.+|+.++.++|+++|.+++.+|.+||||||.|+..++....+.                |++.+++.+.....|.
T Consensus       202 lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~el----------------L~~~ga~~d~~t~~g~  265 (527)
T KOG0505|consen  202 LHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACEL----------------LVEHGADMDAKTKMGE  265 (527)
T ss_pred             HHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHH----------------HHHhhcccchhhhcCC
Confidence            999999999999999999999999999999999999998877664443                7889999999999999


Q ss_pred             CHHHHHHhhhhhHHHHHHhhhhhhhhc
Q 007923          411 HSFAMAGDDLRMKLLYLENRVGLAKLL  437 (585)
Q Consensus       411 t~Lh~A~~~~~~~~l~l~~~~~~~~~L  437 (585)
                      ||+.+|.+..- .+++++.+...+.++
T Consensus       266 ~p~dv~dee~~-~l~eLe~k~k~~~~~  291 (527)
T KOG0505|consen  266 TPLDVADEEEL-YLLELELKQKHQNLR  291 (527)
T ss_pred             CCccchhhhhH-HHHHHHHHHHHHHHH
Confidence            99999987444 566665555444443


No 57 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.88  E-value=3.1e-23  Score=222.24  Aligned_cols=282  Identities=14%  Similarity=0.021  Sum_probs=240.1

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccc-cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDK-VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~-~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~  240 (585)
                      .+||.+|+..|+..+|+.|+.+-+++..+ |..++|++-|++.-+..+++++||.+|++-..++-...|||.+|.. .+.
T Consensus       791 f~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~S-ggy  869 (2131)
T KOG4369|consen  791 FVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARS-GGY  869 (2131)
T ss_pred             chhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcC-cch
Confidence            67999999999999999999999999865 6778999999999999999999999999999999999999999999 899


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCCHHHHHHHHhh
Q 007923          241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-HTN----LDDAHALHYAVAYCDAKTTTELLDL  315 (585)
Q Consensus       241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~d----~~g~tpLh~A~~~g~~~~v~~LL~~  315 (585)
                      .+|+.+|+.+|+.||...+ .+.|..||++|..+|+.+.++.|++.| ++|    .+.+|+|-+|+..|..++|.+||..
T Consensus       870 ~~iI~~llS~GseInSrtg-SklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~  948 (2131)
T KOG4369|consen  870 TKIIHALLSSGSEINSRTG-SKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAA  948 (2131)
T ss_pred             HHHHHHHhhcccccccccc-cccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHH
Confidence            9999999999999998554 678999999999999999999999999 444    6778999999999999999999999


Q ss_pred             CCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHH
Q 007923          316 GLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLT--LDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCI  393 (585)
Q Consensus       316 ~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d--~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~  393 (585)
                      . +++..+-+.|.|||+-+|..|.+++-++||.+|||+|.--  ....|+|-+++..||...+..               
T Consensus       949 ~-anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~--------------- 1012 (2131)
T KOG4369|consen  949 Q-ANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPK--------------- 1012 (2131)
T ss_pred             h-hhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHH---------------
Confidence            8 9999999999999999999999999999999999988642  234589999998888765543               


Q ss_pred             HHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCcccccccc
Q 007923          394 EILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGI  462 (585)
Q Consensus       394 ~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~  462 (585)
                       +|...+.+...+++|+|+|.+|+..++.....+.-...++....+..-.++++-|-..|+.+++....
T Consensus      1013 -lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1013 -LLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred             -hhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheecccc
Confidence             44444566777888888888888766665555554445555556666677888888888887776543


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86  E-value=1.9e-21  Score=179.52  Aligned_cols=142  Identities=20%  Similarity=0.267  Sum_probs=123.3

Q ss_pred             cCCCCCCCCCCCCCCChHHHHHHhCCCH----HHHHHHHhCCC----CCCCCchHHHHHHHcCCHHH---HHHHHhhCCC
Q 007923          250 LSLHRSESCGFPDKHTKRIHRALDSDDV----ELVRMLLKEAH----TNLDDAHALHYAVAYCDAKT---TTELLDLGLA  318 (585)
Q Consensus       250 ~ga~in~~~~~d~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~---v~~LL~~~~a  318 (585)
                      +|++++.   .+..+.++||.|++.|+.    +++++|++.|.    .|..|+||||+|+..|+.+.   +++|+..| +
T Consensus         9 ~~~~~~~---~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-a   84 (166)
T PHA02743          9 NNLGAVE---IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-A   84 (166)
T ss_pred             cchHHhh---hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-C
Confidence            5778887   788899999999999998    67778888883    57889999999999988654   78888887 9


Q ss_pred             CcccCC-CCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHH
Q 007923          319 DVNHRN-SRGYTVLHVAAMRKEPKIIVSLLT-KGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEIL  396 (585)
Q Consensus       319 dvn~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll  396 (585)
                      ++|.+| ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++...+..                |+
T Consensus        85 din~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~----------------Ll  148 (166)
T PHA02743         85 DINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEI----------------LR  148 (166)
T ss_pred             CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHH----------------HH
Confidence            999998 589999999999999999999995 899999999999999999999877655543                67


Q ss_pred             HhhhhcCCcccCCCC
Q 007923          397 EQAERRDPLLREASH  411 (585)
Q Consensus       397 ~~~~~~n~~~~~g~t  411 (585)
                      +.+++++..+..|..
T Consensus       149 ~~ga~~~~~~~~~~~  163 (166)
T PHA02743        149 ANGAVCDDPLSIGLS  163 (166)
T ss_pred             HcCCCCCCcccCCcc
Confidence            888899988887753


No 59 
>PHA02741 hypothetical protein; Provisional
Probab=99.84  E-value=1.2e-20  Score=174.95  Aligned_cols=130  Identities=16%  Similarity=0.086  Sum_probs=112.1

Q ss_pred             ccccCCCChhHHhhhcccCCHHHHHHHHHH------cCCCCCCCCCCCCCCChHHHHHHhCCC----HHHHHHHHhCCC-
Q 007923          220 ITVKSDIDIVTLDKTLPQHIVKQIIDLRVE------LSLHRSESCGFPDKHTKRIHRALDSDD----VELVRMLLKEAH-  288 (585)
Q Consensus       220 in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~------~ga~in~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~-  288 (585)
                      ++.++..|.||||+|+. .++.+++++|+.      .|++++.   +|..|+||||+|+..|+    .+++++|++.|+ 
T Consensus        14 ~~~~~~~g~t~Lh~Aa~-~g~~~~v~~l~~~~~~~~~ga~in~---~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad   89 (169)
T PHA02741         14 IAEKNSEGENFFHEAAR-CGCFDIIARFTPFIRGDCHAAALNA---TDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD   89 (169)
T ss_pred             hhccccCCCCHHHHHHH-cCCHHHHHHHHHHhccchhhhhhhc---cCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence            45677889999999998 789999998753      3688888   89999999999999998    588999999883 


Q ss_pred             ---CCC-CCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 007923          289 ---TNL-DDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARP  353 (585)
Q Consensus       289 ---~d~-~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~  353 (585)
                         .+. .|+||||+|+..++.+++++||...+++++.+|..|+||||+|+..|+.+++++|++.++..
T Consensus        90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence               343 79999999999999999999997544999999999999999999999999999999987654


No 60 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83  E-value=1.4e-20  Score=171.95  Aligned_cols=129  Identities=19%  Similarity=0.084  Sum_probs=105.2

Q ss_pred             ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCC-------CCCCCCCCCCCChHHHHHHhCCCH---HHHHHHHhCCC-
Q 007923          220 ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLH-------RSESCGFPDKHTKRIHRALDSDDV---ELVRMLLKEAH-  288 (585)
Q Consensus       220 in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~-------in~~~~~d~~g~t~Lh~A~~~g~~---~~v~~Ll~~g~-  288 (585)
                      ++.+|..|.||||+|+. .++  ++.++...+..       ++.   +|..|+||||+|+..|+.   +++++|++.|+ 
T Consensus        10 ~~~~d~~g~tpLh~A~~-~g~--~~~l~~~~~~~~~~~~~~~~~---~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad   83 (154)
T PHA02736         10 ASEPDIEGENILHYLCR-NGG--VTDLLAFKNAISDENRYLVLE---YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD   83 (154)
T ss_pred             HHhcCCCCCCHHHHHHH-hCC--HHHHHHHHHHhcchhHHHHHH---hcCCCCEEEEeecccCchhHHHHHHHHHHcCCC
Confidence            45677889999999998 565  34444433332       223   588899999999999886   46889999983 


Q ss_pred             ---CC-CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 007923          289 ---TN-LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPS  354 (585)
Q Consensus       289 ---~d-~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~  354 (585)
                         .| ..|+||||+|+..|+.+++++|+...++++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus        84 in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         84 INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence               34 4799999999999999999999986459999999999999999999999999999999999875


No 61 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83  E-value=3.4e-20  Score=161.60  Aligned_cols=139  Identities=21%  Similarity=0.204  Sum_probs=112.3

Q ss_pred             hHHHHHHhCCCHHHHHHHHhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCH
Q 007923          266 KRIHRALDSDDVELVRMLLKEAH-----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEP  340 (585)
Q Consensus       266 t~Lh~A~~~g~~~~v~~Ll~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~  340 (585)
                      .-+.+|+..+....|+-||+..+     .|.+|.||||.|+++|+.++|..||..| |+++++...||||||-||..++.
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~g-An~~a~T~~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSG-ANKEAKTNEGWTPLHSACKWNNF  143 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHcc-CCcccccccCccchhhhhcccch
Confidence            34678889999999999988773     6788999999999999999999999888 99999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhh
Q 007923          341 KIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDD  419 (585)
Q Consensus       341 ~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~  419 (585)
                      +++.+||++|||||+......||||+|+...+..+.              .-.-+...+.++...++.+.||+.+|-+.
T Consensus       144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t--------------~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDT--------------LELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             hHHHHHHhccCcccccccccchhhHHhhcccchHHH--------------HHHHhhccccChhhhcCccchHHHHHHHh
Confidence            999999999999999999899999999875422111              00112345567777788888888888764


No 62 
>PHA02741 hypothetical protein; Provisional
Probab=99.82  E-value=7.5e-20  Score=169.61  Aligned_cols=116  Identities=21%  Similarity=0.248  Sum_probs=104.0

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhC------C----CCCCCCchHHHHHHHcCC----HHHHHHHHhhCCCCcccCCC
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKE------A----HTNLDDAHALHYAVAYCD----AKTTTELLDLGLADVNHRNS  325 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~------g----~~d~~g~tpLh~A~~~g~----~~~v~~LL~~~~advn~~d~  325 (585)
                      ++..|.||||+|+..|+.+++++|+..      |    ..|..|+||||+|+..|+    .+++++|+..| +++|.++.
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adin~~~~   95 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADINAQEM   95 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCCCCCCc
Confidence            688999999999999999999998542      3    267889999999999998    58889999887 99999985


Q ss_pred             -CCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCcc
Q 007923          326 -RGYTVLHVAAMRKEPKIIVSLLT-KGARPSDLTLDGRKALQISKRLTKAADY  376 (585)
Q Consensus       326 -~G~TpLh~Aa~~g~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~~~  376 (585)
                       .|+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..++...+
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv  148 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMM  148 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHH
Confidence             99999999999999999999998 5999999999999999999998765444


No 63 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.82  E-value=3.4e-20  Score=179.28  Aligned_cols=161  Identities=14%  Similarity=0.145  Sum_probs=144.4

Q ss_pred             ccccccccCChHHHHHHHHhhHHHHHHHHhcCC-CccccCCCChhHHhhhccc----CCHHHHHHHHHHcCCCCCCCCCC
Q 007923          186 DILDKVVADDILVVLSVAHMCGKACEKLLERCI-EITVKSDIDIVTLDKTLPQ----HIVKQIIDLRVELSLHRSESCGF  260 (585)
Q Consensus       186 ~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~-din~~d~~g~t~L~~A~~~----~~~~~i~~~Ll~~ga~in~~~~~  260 (585)
                      -+|..|.+|+|++||++...+.++|+.||+.|. +++.++.-|.||+++++..    ....++|..|...| |||..  -
T Consensus       260 vVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaK--A  336 (452)
T KOG0514|consen  260 VVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAK--A  336 (452)
T ss_pred             HhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchh--h
Confidence            357789999999999999999999999999874 8999999999999998631    34567888888887 77772  2


Q ss_pred             CCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH
Q 007923          261 PDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM  336 (585)
Q Consensus       261 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~  336 (585)
                      ...|+|+|++|+.+|+.++|+.||..|+    .|.+|.|+|++|+.+||.+++++||...++|+...|.+|-|+|.+|-.
T Consensus       337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle  416 (452)
T KOG0514|consen  337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE  416 (452)
T ss_pred             hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence            5679999999999999999999999994    568999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHc
Q 007923          337 RKEPKIIVSLLTK  349 (585)
Q Consensus       337 ~g~~~iv~~Ll~~  349 (585)
                      .||.+|.-+|..+
T Consensus       417 agh~eIa~mlYa~  429 (452)
T KOG0514|consen  417 AGHREIAVMLYAH  429 (452)
T ss_pred             cCchHHHHHHHHH
Confidence            9999999998764


No 64 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82  E-value=1.2e-19  Score=180.63  Aligned_cols=152  Identities=9%  Similarity=0.013  Sum_probs=119.5

Q ss_pred             cccccccCChHHHHHHH-HhhHHHHHHHHhcCCCccccC----CCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCC
Q 007923          187 ILDKVVADDILVVLSVA-HMCGKACEKLLERCIEITVKS----DIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFP  261 (585)
Q Consensus       187 ~~~~~~~~~t~l~l~~a-~~~~~~~~~Ll~~g~din~~d----~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d  261 (585)
                      +-.+|..+.+++.++++ .++.+++++|+++|+++|.++    ..|.||||+|+. .+..+++++|+++|+++|.   ++
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~-~~~~eivklLL~~GADVN~---~~  100 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAID-CDNDDAAKLLIRYGADVNR---YA  100 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCcCc---cc
Confidence            44567777775555444 468899999999999998874    578999999988 6888999999999999987   54


Q ss_pred             -CCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH
Q 007923          262 -DKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM  336 (585)
Q Consensus       262 -~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~  336 (585)
                       ..|.||||+|+..|+.+++++|++.|+    .|..|+||||+|+..|+.+++..+.  + ..   .+..+.+|++++  
T Consensus       101 ~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~-~~---~~~~~~~~~~~~--  172 (300)
T PHA02884        101 EEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--D-NE---ISNFYKHPKKIL--  172 (300)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--C-Cc---ccccccChhhhh--
Confidence             468899999999999999999999883    5678899999998888887765443  2 22   466778888875  


Q ss_pred             cCCHHHHHHHHHcCC
Q 007923          337 RKEPKIIVSLLTKGA  351 (585)
Q Consensus       337 ~g~~~iv~~Ll~~ga  351 (585)
                       ++.+++++|+.+++
T Consensus       173 -~n~ei~~~Lish~v  186 (300)
T PHA02884        173 -INFDILKILVSHFI  186 (300)
T ss_pred             -ccHHHHHHHHHHHH
Confidence             46889999998877


No 65 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.81  E-value=2.7e-19  Score=178.07  Aligned_cols=147  Identities=12%  Similarity=0.066  Sum_probs=133.0

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhcccccccc----ccCChHHHHHHHHhhHHHHHHHHhcCCCccccC-CCChhHHhhhcc
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKV----VADDILVVLSVAHMCGKACEKLLERCIEITVKS-DIDIVTLDKTLP  236 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~----~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d-~~g~t~L~~A~~  236 (585)
                      .++||.|+.++..+++++|+++|++++.++    ..|.||+|+|+..++.+++++|+++|+++|.++ ..|.||||+|+.
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~  113 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL  113 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence            478999999999999999999999999874    589999999999999999999999999999964 579999999999


Q ss_pred             cCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCCCCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923          237 QHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLG  316 (585)
Q Consensus       237 ~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~d~~g~tpLh~A~~~g~~~~v~~LL~~~  316 (585)
                       .+..+++++|+++|++++.   +|..|+||||+|+..++.+++.++...+ .+..+.+|++++   ++.++++.|+.++
T Consensus       114 -~~~~eivklLL~~GAdin~---kd~~G~TpL~~A~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~n~ei~~~Lish~  185 (300)
T PHA02884        114 -HGCLKCLEILLSYGADINI---QTNDMVTPIELALMICNNFLAFMICDNE-ISNFYKHPKKIL---INFDILKILVSHF  185 (300)
T ss_pred             -cCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHhCChhHHHHhcCCc-ccccccChhhhh---ccHHHHHHHHHHH
Confidence             7999999999999999999   8999999999999999999887766443 777888999986   4789999999887


No 66 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.80  E-value=6.4e-20  Score=167.52  Aligned_cols=116  Identities=18%  Similarity=0.160  Sum_probs=98.8

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhCC-----------CCCCCCchHHHHHHHcCCHH---HHHHHHhhCCCCcccCC-
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKEA-----------HTNLDDAHALHYAVAYCDAK---TTTELLDLGLADVNHRN-  324 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-----------~~d~~g~tpLh~A~~~g~~~---~v~~LL~~~~advn~~d-  324 (585)
                      +|..|.||||+|+..|+.  +.+++..+           ..|.+|+||||+|+..|+.+   +++.|+..| +++|.++ 
T Consensus        13 ~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adin~~~~   89 (154)
T PHA02736         13 PDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADINGKER   89 (154)
T ss_pred             cCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCccccCC
Confidence            688999999999999984  34433221           14788999999999999864   678888887 9999998 


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          325 SRGYTVLHVAAMRKEPKIIVSLLT-KGARPSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       325 ~~G~TpLh~Aa~~g~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++...++.
T Consensus        90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~  144 (154)
T PHA02736         90 VFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNI  144 (154)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHH
Confidence            499999999999999999999998 599999999999999999999877665544


No 67 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.79  E-value=3.5e-19  Score=155.30  Aligned_cols=146  Identities=19%  Similarity=0.145  Sum_probs=122.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923          295 HALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA  374 (585)
Q Consensus       295 tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~  374 (585)
                      --+.+|+..+....|+.||+...--||.+|.+|+||||-|+.+|+.+||+.|+..||+++.++..||||||-||...+..
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            34678999999999999999985559999999999999999999999999999999999999999999999999976665


Q ss_pred             cccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhh--hHHHHHHhhhhhhhhcCCCCCchhhHHhhhc
Q 007923          375 DYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLR--MKLLYLENRVGLAKLLFPMEAKVIMDIVHLD  452 (585)
Q Consensus       375 ~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~--~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~  452 (585)
                      .+..                ||..|+|+|.+.....||||+||....  +-+.++.....+-.-+.+..+.||++||...
T Consensus       145 va~~----------------LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  145 VAGR----------------LLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHH----------------HHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            4433                899999999999999999999997433  3334455555555556788899999999776


Q ss_pred             CCcc
Q 007923          453 GTLE  456 (585)
Q Consensus       453 ~~~~  456 (585)
                      +-+.
T Consensus       209 ~~s~  212 (228)
T KOG0512|consen  209 SMSH  212 (228)
T ss_pred             hhhH
Confidence            5443


No 68 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.78  E-value=4.6e-19  Score=166.27  Aligned_cols=119  Identities=29%  Similarity=0.282  Sum_probs=101.6

Q ss_pred             HHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccc
Q 007923          247 RVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNH  322 (585)
Q Consensus       247 Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~  322 (585)
                      |-+..-|.|.   -|+.|.+|||||++.|+..+|++||..|+    .|....||||+|+.+|+.++|+.||... +|||+
T Consensus        20 ld~tehdln~---gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~k-advna   95 (448)
T KOG0195|consen   20 LDDTEHDLNV---GDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRK-ADVNA   95 (448)
T ss_pred             ecCccccccc---ccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHh-cccch
Confidence            3344456676   68889999999999999999999999884    3455679999999999999999999888 99999


Q ss_pred             CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923          323 RNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR  369 (585)
Q Consensus       323 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~  369 (585)
                      .|..|+|||||||..|+..|++-|+..||-++..|++|.|||..|.-
T Consensus        96 vnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp  142 (448)
T KOG0195|consen   96 VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKP  142 (448)
T ss_pred             hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhch
Confidence            99999999999999999999999999999999999999999886643


No 69 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.75  E-value=6.8e-18  Score=138.89  Aligned_cols=88  Identities=33%  Similarity=0.482  Sum_probs=81.3

Q ss_pred             HHHHHhCCCHHHHHHHHhCC-CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923          268 IHRALDSDDVELVRMLLKEA-HTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL  346 (585)
Q Consensus       268 Lh~A~~~g~~~~v~~Ll~~g-~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L  346 (585)
                      ||+|++.|+.+++++|++.+ .++. |.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.+|+.+++++|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~L   78 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-GNTALHYAAENGNLEIVKLLLENG-ADINSQDKNGNTALHYAAENGNLEIVKLL   78 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-CCCHHHHHHHcCCHHHHHHHHHhc-ccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence            79999999999999999988 4666 999999999999999999999988 99999999999999999999999999999


Q ss_pred             HHcCCCCCCCC
Q 007923          347 LTKGARPSDLT  357 (585)
Q Consensus       347 l~~gad~~~~d  357 (585)
                      +++|++++.+|
T Consensus        79 l~~g~~~~~~n   89 (89)
T PF12796_consen   79 LEHGADVNIRN   89 (89)
T ss_dssp             HHTTT-TTSS-
T ss_pred             HHcCCCCCCcC
Confidence            99999999876


No 70 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70  E-value=4.2e-17  Score=173.80  Aligned_cols=110  Identities=27%  Similarity=0.318  Sum_probs=59.2

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhhCCCCcccC---------C--------------CCCChHHHHHHHcCCHHHHHHHHH
Q 007923          292 DDAHALHYAVAYCDAKTTTELLDLGLADVNHR---------N--------------SRGYTVLHVAAMRKEPKIIVSLLT  348 (585)
Q Consensus       292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~---------d--------------~~G~TpLh~Aa~~g~~~iv~~Ll~  348 (585)
                      .|.||||+|+.+.+.++|+.||+.| |||+++         |              ..|..||.+||..++++|+++|++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~g-ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAG-ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcC-CchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            3555555555555555555555554 555432         0              134566666666666666666666


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhh--cCCcccCCCCHHHHHHh
Q 007923          349 KGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAER--RDPLLREASHSFAMAGD  418 (585)
Q Consensus       349 ~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~--~n~~~~~g~t~Lh~A~~  418 (585)
                      +|||++.+|.+|+|.||..+..-....++.                +|+.+++  ...+|..|.|||.+||+
T Consensus       262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~----------------~L~~ga~~l~~v~N~qgLTPLtLAak  317 (782)
T KOG3676|consen  262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDL----------------ALELGANALEHVRNNQGLTPLTLAAK  317 (782)
T ss_pred             cCCCCCccccCCChHHHHHHHHHHHHHHHH----------------HHhcCCCccccccccCCCChHHHHHH
Confidence            666666666666666666555422222211                3445544  44556666666666665


No 71 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.69  E-value=4.3e-17  Score=153.12  Aligned_cols=136  Identities=19%  Similarity=0.220  Sum_probs=114.2

Q ss_pred             hcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC----CCC
Q 007923          215 ERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA----HTN  290 (585)
Q Consensus       215 ~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g----~~d  290 (585)
                      +..-|.|.-|+.|.+|||+|+. .|+..+++.|+..|+.+|.   .+....||||+|+.+|+-++|+.||+..    ++|
T Consensus        22 ~tehdln~gddhgfsplhwaak-egh~aivemll~rgarvn~---tnmgddtplhlaaahghrdivqkll~~kadvnavn   97 (448)
T KOG0195|consen   22 DTEHDLNVGDDHGFSPLHWAAK-EGHVAIVEMLLSRGARVNS---TNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN   97 (448)
T ss_pred             CcccccccccccCcchhhhhhh-cccHHHHHHHHhccccccc---ccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh
Confidence            4456788899999999999999 8999999999999999999   7777789999999999999999999887    277


Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 007923          291 LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSD  355 (585)
Q Consensus       291 ~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~  355 (585)
                      ..|+|||||||..|...+.+.|+..| +-|+..|+.|.|||..|--.-...+.++--++|-++|.
T Consensus        98 ehgntplhyacfwgydqiaedli~~g-a~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nr  161 (448)
T KOG0195|consen   98 EHGNTPLHYACFWGYDQIAEDLISCG-AAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNR  161 (448)
T ss_pred             ccCCCchhhhhhhcHHHHHHHHHhcc-ceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCc
Confidence            99999999999999999999999887 99999999999999887422222222222346766653


No 72 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.69  E-value=1.8e-16  Score=168.99  Aligned_cols=160  Identities=21%  Similarity=0.223  Sum_probs=128.9

Q ss_pred             CCccccCCCChhHHhhhcc--cCCHHHHHHHHHHcCCC-CCCCC-CCCCCCChHHHHHHhCCCHHHHHHHHhCCC-CC--
Q 007923          218 IEITVKSDIDIVTLDKTLP--QHIVKQIIDLRVELSLH-RSESC-GFPDKHTKRIHRALDSDDVELVRMLLKEAH-TN--  290 (585)
Q Consensus       218 ~din~~d~~g~t~L~~A~~--~~~~~~i~~~Ll~~ga~-in~~~-~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~d--  290 (585)
                      -+++.+...|.|.||.|.-  ..++.+++..|++.-.. +|... +-...|.||||+|+.+.+.++|++|++.|+ ++  
T Consensus       134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR  213 (782)
T KOG3676|consen  134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHAR  213 (782)
T ss_pred             hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhH
Confidence            5677777778888888875  35667788888765331 11100 013468888888888888888888888883 21  


Q ss_pred             ------------------------CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923          291 ------------------------LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL  346 (585)
Q Consensus       291 ------------------------~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L  346 (585)
                                              .-|..||.+||-.++.+++++|++.| ||+|++|.+|+|.||..+..-..++..++
T Consensus       214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~g-Ad~~aqDS~GNTVLH~lVi~~~~~My~~~  292 (782)
T KOG3676|consen  214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHG-ADPNAQDSNGNTVLHMLVIHFVTEMYDLA  292 (782)
T ss_pred             hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHHHHHHHHHHH
Confidence                                    13679999999999999999999987 99999999999999999999999999999


Q ss_pred             HHcCCC--CCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          347 LTKGAR--PSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       347 l~~gad--~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      |++|++  ...+|+.|.|||.+|++.|+...+..
T Consensus       293 L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~  326 (782)
T KOG3676|consen  293 LELGANALEHVRNNQGLTPLTLAAKLGKKEMFQH  326 (782)
T ss_pred             HhcCCCccccccccCCCChHHHHHHhhhHHHHHH
Confidence            999999  89999999999999999888665544


No 73 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.65  E-value=1.8e-15  Score=131.73  Aligned_cols=117  Identities=24%  Similarity=0.305  Sum_probs=56.6

Q ss_pred             CCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHH
Q 007923          225 DIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYA  300 (585)
Q Consensus       225 ~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A  300 (585)
                      ..|.||||+|+. .+..+++++|++.|.+++.   .+..|.||||.|+..++.+++++|++.+.    .+..|.||+|+|
T Consensus         5 ~~g~t~l~~a~~-~~~~~~i~~li~~~~~~~~---~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a   80 (126)
T cd00204           5 EDGRTPLHLAAS-NGHLEVVKLLLENGADVNA---KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA   80 (126)
T ss_pred             cCCCCHHHHHHH-cCcHHHHHHHHHcCCCCCc---cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            344555555554 3444555555555544444   44445555555555555555555554441    233444555555


Q ss_pred             HHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923          301 VAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL  346 (585)
Q Consensus       301 ~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L  346 (585)
                      +..++.+++++|+..+ .+++..+..|.||||+|...++.+++++|
T Consensus        81 ~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          81 ARNGNLDVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             HHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            5555555555544444 44444444455555555544444444444


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.63  E-value=6.6e-15  Score=128.19  Aligned_cols=112  Identities=29%  Similarity=0.403  Sum_probs=105.4

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA  335 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa  335 (585)
                      ++..|.||||+|+..++.+++++|++.+.    .+..|.||||+|+..++.++++.|+..+ ++++..+..|.||+|+|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG-ADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHH
Confidence            57789999999999999999999999984    4678999999999999999999999998 899999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 007923          336 MRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK  372 (585)
Q Consensus       336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  372 (585)
                      ..++.+++++|+++|.+++..+..|.||+++|...++
T Consensus        82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~  118 (126)
T cd00204          82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH  118 (126)
T ss_pred             HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCC
Confidence            9999999999999999999999999999999998744


No 75 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.59  E-value=4.2e-15  Score=116.30  Aligned_cols=100  Identities=21%  Similarity=0.338  Sum_probs=92.0

Q ss_pred             hHHHHHHhCCCHHHHHHHHhCC-CCC--CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHH
Q 007923          266 KRIHRALDSDDVELVRMLLKEA-HTN--LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKI  342 (585)
Q Consensus       266 t~Lh~A~~~g~~~~v~~Ll~~g-~~d--~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~i  342 (585)
                      --+.|++++|..+-|+-.+..| ++|  ..|++|||||+.+|..+++++|+..| |+++.+|+.|-|||..|+..||.++
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHhhHHH
Confidence            3578999999999999999888 554  57899999999999999999999998 9999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHH
Q 007923          343 IVSLLTKGARPSDLTLDGRKALQI  366 (585)
Q Consensus       343 v~~Ll~~gad~~~~d~~G~TpL~~  366 (585)
                      |++||++|||-..+..+|.+.+..
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhh
Confidence            999999999999999999887754


No 76 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.56  E-value=1.8e-14  Score=118.37  Aligned_cols=87  Identities=14%  Similarity=0.039  Sum_probs=55.6

Q ss_pred             HHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHH
Q 007923          165 LYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQII  244 (585)
Q Consensus       165 L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~  244 (585)
                      ||+|+..+..+++++|++.+.+++.    |+|++++|+..++.+++++|+++|++++.+|..|+||||+|+. .+..+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAE-NGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHH-TTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHH-cCCHHHH
Confidence            5666666666666666666655554    5566666666666666666666666666666666666666666 5666666


Q ss_pred             HHHHHcCCCCCC
Q 007923          245 DLRVELSLHRSE  256 (585)
Q Consensus       245 ~~Ll~~ga~in~  256 (585)
                      ++|+++|++++.
T Consensus        76 ~~Ll~~g~~~~~   87 (89)
T PF12796_consen   76 KLLLEHGADVNI   87 (89)
T ss_dssp             HHHHHTTT-TTS
T ss_pred             HHHHHcCCCCCC
Confidence            666666666665


No 77 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.54  E-value=1.1e-13  Score=133.71  Aligned_cols=128  Identities=25%  Similarity=0.297  Sum_probs=116.1

Q ss_pred             CCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCC-----HHHHHHHHhCCC----
Q 007923          218 IEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDD-----VELVRMLLKEAH----  288 (585)
Q Consensus       218 ~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~-----~~~v~~Ll~~g~----  288 (585)
                      ......+..+.+++|.++. .+..+++++|+..|++++.   ++..|.||||+|+..++     .+++++|++.|+    
T Consensus        64 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~---~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~  139 (235)
T COG0666          64 RHLAARDLDGRLPLHSAAS-KGDDKIVKLLLASGADVNA---KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV  139 (235)
T ss_pred             cccccCCccccCHHHHHHH-cCcHHHHHHHHHcCCCccc---ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC
Confidence            3445566778999999998 7888999999999999998   89999999999999999     999999999886    


Q ss_pred             ---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 007923          289 ---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG  350 (585)
Q Consensus       289 ---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g  350 (585)
                         .|..|+||||+|+..|+.+++..|+..+ ++++.++..|.|+|++|+..++.++++.|++.+
T Consensus       140 ~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         140 NNLRDEDGNTPLHWAALNGDADIVELLLEAG-ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             ccccCCCCCchhHHHHHcCchHHHHHHHhcC-CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence               2578999999999999999999999997 999999999999999999999999999999976


No 78 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.53  E-value=7.5e-15  Score=108.92  Aligned_cols=56  Identities=38%  Similarity=0.516  Sum_probs=34.4

Q ss_pred             HHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 007923          312 LLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQIS  367 (585)
Q Consensus       312 LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A  367 (585)
                      ||+.+.+++|.+|..|+||||+||.+|+.+++++|+++|+|++.+|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56666799999999999999999999999999999999999999999999999997


No 79 
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.50  E-value=9.7e-15  Score=143.21  Aligned_cols=84  Identities=27%  Similarity=0.552  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHH
Q 007923           44 LRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVA  123 (585)
Q Consensus        44 ~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~  123 (585)
                      -.+.++++..|+.+.+   |+||+|+|+ +.+|||||.|||+||.|||+|+.+++.++...     .+|..+...++|.+
T Consensus        28 ~~~fS~~~~~l~~~e~---y~DVtfvve-~~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~-----~ipLq~t~~eAF~~   98 (620)
T KOG4350|consen   28 SNNFSQSFDELFTSED---YSDVTFVVE-DTRFPAHRVILAARSSYFRALLYGGMQESHQQ-----LIPLQETNSEAFRA   98 (620)
T ss_pred             ccchhHHHHHHhhcCc---ccceEEEEe-ccccchhhhhHHHHHHHHHHHHhhhhhhhhhc-----ccccccccHHHHHH
Confidence            4567999999999999   999999998 89999999999999999999999998765432     46776777899999


Q ss_pred             HHHHHhcCCccCC
Q 007923          124 VLAYLYCGKVRPF  136 (585)
Q Consensus       124 lL~ylYtg~l~~~  136 (585)
                      +|+|+|||++.+.
T Consensus        99 lLrYiYtg~~~l~  111 (620)
T KOG4350|consen   99 LLRYIYTGKIDLA  111 (620)
T ss_pred             HHHHHhhcceecc
Confidence            9999999998654


No 80 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.46  E-value=6.3e-13  Score=128.41  Aligned_cols=118  Identities=26%  Similarity=0.307  Sum_probs=109.1

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCC-----HHHHHHHHhhCCC---CcccCCCCC
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCD-----AKTTTELLDLGLA---DVNHRNSRG  327 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~-----~~~v~~LL~~~~a---dvn~~d~~G  327 (585)
                      .+..+.+++|.++..+..+++++|+..|.    .|..|.||||+|+..|+     .++++.||..| +   +.+.+|..|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g-~~~~~~~~~~~~g  147 (235)
T COG0666          69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG-ADLDVNNLRDEDG  147 (235)
T ss_pred             CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcC-CCCCCccccCCCC
Confidence            46778999999999999999999999993    67899999999999999     99999999998 7   677779999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          328 YTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       328 ~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      +||||+|+..|+.+++++|++.|++++.++..|.|+++.|+..++...+..
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  198 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKL  198 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHH
Confidence            999999999999999999999999999999999999999999887766554


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.41  E-value=4e-13  Score=99.02  Aligned_cols=54  Identities=33%  Similarity=0.428  Sum_probs=45.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q 007923          293 DAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLL  347 (585)
Q Consensus       293 g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll  347 (585)
                      |+||||+|+..|+.+++++|++.+ +|+|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999997 999999999999999999999999999996


No 82 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.39  E-value=1.6e-12  Score=145.39  Aligned_cols=103  Identities=22%  Similarity=0.251  Sum_probs=83.6

Q ss_pred             hHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHH
Q 007923          266 KRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPK  341 (585)
Q Consensus       266 t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~  341 (585)
                      +.|+.|+..|+.++|++|++.|+    .|..|+||||+|+..|+.+++++||..| +++|.+|..|+||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHH
Confidence            45778888888888888888772    4577888888888888888888888886 888888888888888888888888


Q ss_pred             HHHHHHHc-------CCCCCCCCCCCCCHHHHHHH
Q 007923          342 IIVSLLTK-------GARPSDLTLDGRKALQISKR  369 (585)
Q Consensus       342 iv~~Ll~~-------gad~~~~d~~G~TpL~~A~~  369 (585)
                      ++++|+++       |++++..+..|.+|+..+..
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~~  197 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSP  197 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccchhhh
Confidence            88888888       88888888888887776554


No 83 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.38  E-value=5.8e-13  Score=104.42  Aligned_cols=105  Identities=18%  Similarity=0.155  Sum_probs=91.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923          295 HALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA  374 (585)
Q Consensus       295 tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~  374 (585)
                      --..|++++|..+.|+.....| .|||..- .|+||||+||-+|..+++++|+..||+++.+|++|-|||.-|+..||..
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEG-LNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcc-ccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            4568999999999999999888 8998665 8999999999999999999999999999999999999999999988876


Q ss_pred             cccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHH
Q 007923          375 DYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAG  417 (585)
Q Consensus       375 ~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~  417 (585)
                      .+..                ||..|++......+|.+.+..+-
T Consensus        82 cVkl----------------LL~~GAdrt~~~PdG~~~~eate  108 (117)
T KOG4214|consen   82 CVKL----------------LLQNGADRTIHAPDGTALIEATE  108 (117)
T ss_pred             HHHH----------------HHHcCcccceeCCCchhHHhhcc
Confidence            5544                67889998888888866655443


No 84 
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.36  E-value=2.6e-12  Score=114.75  Aligned_cols=84  Identities=19%  Similarity=0.417  Sum_probs=67.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCCCcccceEEEecC--CCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccCh
Q 007923           41 ITALRILSKTLETIFESQDFDYFTDAKIVLST--GREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGF  118 (585)
Q Consensus        41 ~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~--~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~  118 (585)
                      .+|++||+.-...|+++++   |||++|.+++  ++.||||++||||||+||+-  .++..+ +++     .....++.+
T Consensus        47 dSF~SRLLaitadL~Ek~q---fSDlk~K~~gns~k~i~AHKfVLAARsD~Wkf--aN~~de-kse-----~~~~dDad~  115 (280)
T KOG4591|consen   47 DSFISRLLAITADLLEKEQ---FSDLKFKFAGNSDKHIPAHKFVLAARSDFWKF--ANGGDE-KSE-----ELDLDDADF  115 (280)
T ss_pred             hhHHHHHHHHHHHHhhccc---ccceeEEecCCccccCchhhhhhhhhcchhhh--ccCCCc-chh-----hhcccccCH
Confidence            5899999999999999999   9999999973  57899999999999999963  433222 122     123346788


Q ss_pred             hHHHHHHHHHhcCCccC
Q 007923          119 DPLVAVLAYLYCGKVRP  135 (585)
Q Consensus       119 ~~~~~lL~ylYtg~l~~  135 (585)
                      ++|.+.++|+||+.+..
T Consensus       116 Ea~~t~iRWIYTDEidf  132 (280)
T KOG4591|consen  116 EAFHTAIRWIYTDEIDF  132 (280)
T ss_pred             HHHHHhheeeecccccc
Confidence            99999999999998764


No 85 
>PHA02713 hypothetical protein; Provisional
Probab=99.34  E-value=3e-12  Score=140.39  Aligned_cols=107  Identities=21%  Similarity=0.378  Sum_probs=85.2

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCC--CCcccccccccccccC
Q 007923           40 DITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQR--GPKFELKELVRDYEVG  117 (585)
Q Consensus        40 ~~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~--~~~~~l~~li~~~~v~  117 (585)
                      +..+...+++.|.+|+.++.   ||||+|.|++|++|||||+||||+|+||++||++++.+.  ..++.+      .++.
T Consensus         5 ~~~h~~~~l~~l~~lr~~~~---l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l------~~v~   75 (557)
T PHA02713          5 DIKHNRRVVSNISNLLDDDI---LCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNL------QMFD   75 (557)
T ss_pred             hhhhhHHHHHHHHHHHhCCC---CCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEe------ccCC
Confidence            34667889999999999999   999999995478999999999999999999999887643  233333      3578


Q ss_pred             hhHHHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHH
Q 007923          118 FDPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVA  178 (585)
Q Consensus       118 ~~~~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~  178 (585)
                      ++++..+|+|+|||++  +.                     +.+...|..|..++...+.+
T Consensus        76 ~~~~~~ll~y~Yt~~i--~~---------------------~nv~~ll~aA~~lqi~~l~~  113 (557)
T PHA02713         76 KDAVKNIVQYLYNRHI--SS---------------------MNVIDVLKCADYLLIDDLVT  113 (557)
T ss_pred             HHHHHHHHHHhcCCCC--CH---------------------HHHHHHHHHHHHHCHHHHHH
Confidence            8899999999999963  21                     12345678888888877664


No 86 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.34  E-value=7.3e-12  Score=118.22  Aligned_cols=114  Identities=27%  Similarity=0.279  Sum_probs=101.3

Q ss_pred             CChHHHHHHhCCCHHHHHHHHhCC----CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccC-CCCCChHHHHHHHcC
Q 007923          264 HTKRIHRALDSDDVELVRMLLKEA----HTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHR-NSRGYTVLHVAAMRK  338 (585)
Q Consensus       264 g~t~Lh~A~~~g~~~~v~~Ll~~g----~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~-d~~G~TpLh~Aa~~g  338 (585)
                      -..||.-++..|+.+....||+.-    -.|..|.|||..|+..|+.++|++||+.| +|||.. +..++||||+||..|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~g-aDvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG-ADVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC-CCcCcccccccccHHHHHHHcC
Confidence            457899999999999998888754    27899999999999999999999999998 999975 568899999999999


Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923          339 EPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI  378 (585)
Q Consensus       339 ~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~  378 (585)
                      +.++.++|++.||.+...|.-|+|+-..|+.-|+.+-+..
T Consensus        91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~i  130 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAI  130 (396)
T ss_pred             CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHH
Confidence            9999999999999999999999999999999888765543


No 87 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.34  E-value=2.3e-12  Score=144.02  Aligned_cols=113  Identities=24%  Similarity=0.225  Sum_probs=92.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923          295 HALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA  374 (585)
Q Consensus       295 tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~  374 (585)
                      ++|+.|+..|+.+.++.|+..| +++|.+|..|+||||+||..|+.+++++|+++|++++.+|.+|+||||+|+..++..
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGG-ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            5699999999999999999987 999999999999999999999999999999999999999999999999999988776


Q ss_pred             cccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHH
Q 007923          375 DYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAG  417 (585)
Q Consensus       375 ~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~  417 (585)
                      .+..+...+..         -.+.+++.+..+..|.+|+..+.
T Consensus       163 iv~~Ll~~~~~---------~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        163 VVQLLSRHSQC---------HFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHhCCCc---------ccccCCCCCccccCCCCccchhh
Confidence            66542211110         01126677777777777766554


No 88 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31  E-value=4.1e-12  Score=128.73  Aligned_cols=100  Identities=27%  Similarity=0.319  Sum_probs=87.9

Q ss_pred             HHHHHhCCCHHHHHHHHhCC-C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHH
Q 007923          268 IHRALDSDDVELVRMLLKEA-H---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKII  343 (585)
Q Consensus       268 Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv  343 (585)
                      |.-|+..|-+++|+-.+..- +   .|..|.|+||-|+..||.+||++|++.| +|||+.|.+||||||+||..+++-++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~g-anVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFG-ANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcC-CcccCccCCCCchhhhhhhcCchHHH
Confidence            35578899999999888765 2   7889999999999999999999999998 99999999999999999999999999


Q ss_pred             HHHHHcCCCCCCCC-CCCCCHHHHHH
Q 007923          344 VSLLTKGARPSDLT-LDGRKALQISK  368 (585)
Q Consensus       344 ~~Ll~~gad~~~~d-~~G~TpL~~A~  368 (585)
                      +.|++.||-|-+.+ .++.||..-+-
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCe  658 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCE  658 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcc
Confidence            99999999876554 37888876443


No 89 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.28  E-value=2.3e-12  Score=95.50  Aligned_cols=55  Identities=13%  Similarity=0.120  Sum_probs=27.8

Q ss_pred             HHhcC-CCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHH
Q 007923          213 LLERC-IEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRA  271 (585)
Q Consensus       213 Ll~~g-~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A  271 (585)
                      ||++| +++|.+|..|.||||+|+. .++.+++++|++.|++++.   +|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~-~g~~~~v~~Ll~~g~d~~~---~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAAR-YGHSEVVRLLLQNGADPNA---KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHH-HT-HHHHHHHHHCT--TT------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHH-cCcHHHHHHHHHCcCCCCC---CcCCCCCHHHhC
Confidence            56667 7788888888888888888 6888888888888888888   788888888876


No 90 
>PHA02790 Kelch-like protein; Provisional
Probab=99.25  E-value=1.7e-11  Score=132.42  Aligned_cols=101  Identities=20%  Similarity=0.268  Sum_probs=77.5

Q ss_pred             HHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHH
Q 007923           49 KTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYL  128 (585)
Q Consensus        49 ~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~yl  128 (585)
                      .++..|...++   ||||.+.+  |++|||||+||||.||||++||++++.|++.++.+   +. .++.++++..+|+|+
T Consensus        11 ~~~~~~~~~~~---~~~~~~~~--~~~~~~HR~VLAa~S~YFraMF~~~~~Es~~~v~~---~~-~~v~~~~l~~lldy~   81 (480)
T PHA02790         11 KNILALSMTKK---FKTIIEAI--GGNIIVNSTILKKLSPYFRTHLRQKYTKNKDPVTR---VC-LDLDIHSLTSIVIYS   81 (480)
T ss_pred             hhHHHHHhhhh---hceEEEEc--CcEEeeehhhhhhcCHHHHHHhcCCccccccceEE---Ee-cCcCHHHHHHHHHhh
Confidence            45567888888   99998888  68999999999999999999999988766443221   11 267889999999999


Q ss_pred             hcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHH
Q 007923          129 YCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVAL  179 (585)
Q Consensus       129 Ytg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~  179 (585)
                      |||++.++.++|                     ...|..|..++..++++.
T Consensus        82 YTg~l~it~~nV---------------------~~ll~aA~~Lqi~~v~~~  111 (480)
T PHA02790         82 YTGKVYIDSHNV---------------------VNLLRASILTSVEFIIYT  111 (480)
T ss_pred             eeeeEEEecccH---------------------HHHHHHHHHhChHHHHHH
Confidence            999987765432                     345677777777665543


No 91 
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.24  E-value=3.4e-11  Score=131.73  Aligned_cols=108  Identities=28%  Similarity=0.439  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCC-CcccccccccccccCh
Q 007923           40 DITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRG-PKFELKELVRDYEVGF  118 (585)
Q Consensus        40 ~~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~-~~~~l~~li~~~~v~~  118 (585)
                      ...+...+.+.|+.+++.+.   ||||++.++ +++|+|||.||||.||||++||++++.+.. .++.+.      ++.+
T Consensus        16 ~~~h~~~~l~~l~~lr~~~~---lcDv~L~v~-~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~------~v~~   85 (571)
T KOG4441|consen   16 DPSHSKFLLQGLNELREEGL---LCDVTLLVG-DREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLE------GVDP   85 (571)
T ss_pred             cHHHHHHHHHHHHHHHHhCC---CceEEEEEC-CeeechHHHHHHhccHHHHHHhcCCcccccceEEEEe------cCCH
Confidence            45788889999999999999   999999998 899999999999999999999999877654 333333      4788


Q ss_pred             hHHHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHH
Q 007923          119 DPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVA  178 (585)
Q Consensus       119 ~~~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~  178 (585)
                      +++..+++|+|||++.++.+.+                     .+.|-.|..++.+++++
T Consensus        86 ~~l~~ll~y~Yt~~i~i~~~nV---------------------q~ll~aA~~lQi~~v~~  124 (571)
T KOG4441|consen   86 ETLELLLDYAYTGKLEISEDNV---------------------QELLEAASLLQIPEVVD  124 (571)
T ss_pred             HHHHHHHHHhhcceEEechHhH---------------------HHHHHHHHHhhhHHHHH
Confidence            8999999999999987654433                     33455666666666544


No 92 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23  E-value=1.4e-11  Score=90.65  Aligned_cols=54  Identities=17%  Similarity=0.215  Sum_probs=39.1

Q ss_pred             ChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHH
Q 007923          227 DIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLL  284 (585)
Q Consensus       227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll  284 (585)
                      |.||||+|+. .++.+++++|+++|+++|.   +|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~-~g~~~~~~~Ll~~~~din~---~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAAR-SGNLEIVKLLLEHGADINA---QDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHH-TT-HHHHHHHHHTTSGTT----B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHH-hCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHccCHHHHHHHC
Confidence            6788888888 6888888888888888888   7888888888888888888888875


No 93 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.21  E-value=7.2e-11  Score=111.59  Aligned_cols=114  Identities=18%  Similarity=0.108  Sum_probs=84.9

Q ss_pred             hhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-CCC----CCCchHHHHHHH
Q 007923          228 IVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-HTN----LDDAHALHYAVA  302 (585)
Q Consensus       228 ~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~d----~~g~tpLh~A~~  302 (585)
                      ..||.-++. .+..+-...|++.--++|.   +|..|+|+|..|+..|+.++|++||+.| ++|    ..+.||||+|+.
T Consensus        13 ~~~Lle~i~-Kndt~~a~~LLs~vr~vn~---~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL   88 (396)
T KOG1710|consen   13 KSPLLEAID-KNDTEAALALLSTVRQVNQ---RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL   88 (396)
T ss_pred             hhHHHHHHc-cCcHHHHHHHHHHhhhhhc---cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence            456666666 5666666666665545777   7778888888888888888888888887 344    446788888888


Q ss_pred             cCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923          303 YCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL  346 (585)
Q Consensus       303 ~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L  346 (585)
                      .|+.++.+.||+.| +.....|.-|+|+-..||.-|+.++|..+
T Consensus        89 SGn~dvcrllldaG-a~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   89 SGNQDVCRLLLDAG-ARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             cCCchHHHHHHhcc-CccccccchhhhHHHHHHHhcchHHHHHH
Confidence            88888888888777 88888888888888888888887777665


No 94 
>PF00651 BTB:  BTB/POZ domain;  InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.20  E-value=6.1e-11  Score=101.59  Aligned_cols=105  Identities=28%  Similarity=0.486  Sum_probs=77.1

Q ss_pred             HHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhc
Q 007923           51 LETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYC  130 (585)
Q Consensus        51 l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYt  130 (585)
                      |++++.++.   ++|++|.+++|+.|+|||.||+++||||+.+|.+.........    .+...++.++++..+++|+|+
T Consensus         1 ~~~~~~~~~---~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~l~~~Y~   73 (111)
T PF00651_consen    1 LNDLFNSNE---FSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGSKFKESTVP----EISLPDVSPEAFEAFLEYMYT   73 (111)
T ss_dssp             HHHHHHHTT---S--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEE----EEEETTSCHHHHHHHHHHHHH
T ss_pred             ChHHHcCCC---CCCEEEEECCCEEEeechhhhhccchhhhhccccccccccccc----ccccccccccccccccccccC
Confidence            578999999   9999999975699999999999999999999987721111111    244456788899999999999


Q ss_pred             CCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHh
Q 007923          131 GKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQR  182 (585)
Q Consensus       131 g~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~  182 (585)
                      |.+...          .          .+.+...+..|..++.+.+.+.+.+
T Consensus        74 ~~~~~~----------~----------~~~~~~ll~lA~~~~~~~L~~~~~~  105 (111)
T PF00651_consen   74 GEIEIN----------S----------DENVEELLELADKLQIPELKKACEK  105 (111)
T ss_dssp             SEEEEE---------------------TTTHHHHHHHHHHTTBHHHHHHHHH
T ss_pred             CcccCC----------H----------HHHHHHHHHHHHHhCcHHHHHHHHH
Confidence            986543          0          1234566888889999888776643


No 95 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.11  E-value=1.8e-10  Score=116.92  Aligned_cols=108  Identities=12%  Similarity=0.087  Sum_probs=90.3

Q ss_pred             HHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHH
Q 007923          203 AHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRM  282 (585)
Q Consensus       203 a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~  282 (585)
                      -.|-.++|+..+..--|+...++.|.|+||-|+. .++.+||++|++.|+|||.   .|.+||||||.|+..+++.+++.
T Consensus       559 LeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiC-aghyeIVkFLi~~ganVNa---~DSdGWTPLHCAASCNnv~~ckq  634 (752)
T KOG0515|consen  559 LEGELDLVQRIIYEVTDPSQPNDEGITALHNAIC-AGHYEIVKFLIEFGANVNA---ADSDGWTPLHCAASCNNVPMCKQ  634 (752)
T ss_pred             hcchHHHHHHHHHhhcCCCCCCccchhHHhhhhh-cchhHHHHHHHhcCCcccC---ccCCCCchhhhhhhcCchHHHHH
Confidence            3567889999998888999999999999999999 7999999999999999999   89999999999999999999999


Q ss_pred             HHhCCC-----CCCCCchHHHHHH--HcCCHHHHHHHHh
Q 007923          283 LLKEAH-----TNLDDAHALHYAV--AYCDAKTTTELLD  314 (585)
Q Consensus       283 Ll~~g~-----~d~~g~tpLh~A~--~~g~~~~v~~LL~  314 (585)
                      |++.|+     .-.++.|+.--+-  ..|...+.++|-.
T Consensus       635 LVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  635 LVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            999994     2256667655432  2355667777754


No 96 
>PHA03098 kelch-like protein; Provisional
Probab=99.02  E-value=4.7e-10  Score=123.57  Aligned_cols=90  Identities=28%  Similarity=0.462  Sum_probs=69.2

Q ss_pred             cCCCCcccceEEEe--cCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCcc
Q 007923           57 SQDFDYFTDAKIVL--STGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVR  134 (585)
Q Consensus        57 ~~~~~~~~Dv~i~v--~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~  134 (585)
                      ++.   ||||+|.|  + |++|+|||+||+++|+||++||.+++.  ...+      .... ..++|..+|+|+|||++.
T Consensus         6 ~~~---~~Dv~l~~~~~-~~~~~~Hk~vLaa~S~yF~~mf~~~~~--~~~i------~l~~-~~~~~~~~l~y~Ytg~~~   72 (534)
T PHA03098          6 LQK---FCDESIIIVNG-GGIIKVHKIILSSSSEYFKKMFKNNFK--ENEI------NLNI-DYDSFNEVIKYIYTGKIN   72 (534)
T ss_pred             cCC---CCCEEEEEEcC-CEEEEeHHHHHHhhhHHHHHHHhCCCC--CceE------EecC-CHHHHHHHHHHhcCCceE
Confidence            667   99999998  7 999999999999999999999998764  2222      2333 677999999999999976


Q ss_pred             CCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHH
Q 007923          135 PFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALY  180 (585)
Q Consensus       135 ~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~l  180 (585)
                      ++.+.                     +...|..|..++.+++.+..
T Consensus        73 i~~~~---------------------~~~ll~~A~~l~~~~l~~~C   97 (534)
T PHA03098         73 ITSNN---------------------VKDILSIANYLIIDFLINLC   97 (534)
T ss_pred             EcHHH---------------------HHHHHHHHHHhCcHHHHHHH
Confidence            54322                     34557777777877755433


No 97 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.85  E-value=3.2e-09  Score=67.29  Aligned_cols=30  Identities=37%  Similarity=0.441  Sum_probs=25.9

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 007923          326 RGYTVLHVAAMRKEPKIIVSLLTKGARPSD  355 (585)
Q Consensus       326 ~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~  355 (585)
                      +|+||||+||..|+.++|++||++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            588999999999999999999999988873


No 98 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.80  E-value=6.3e-09  Score=67.89  Aligned_cols=33  Identities=39%  Similarity=0.444  Sum_probs=28.4

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 007923          326 RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTL  358 (585)
Q Consensus       326 ~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~  358 (585)
                      +|+||||+|+.+|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999888764


No 99 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.78  E-value=3.3e-09  Score=113.14  Aligned_cols=80  Identities=30%  Similarity=0.275  Sum_probs=74.7

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 007923          289 TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNS-RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQIS  367 (585)
Q Consensus       289 ~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A  367 (585)
                      .|..|+|+||+|+..+..+++++||.+| +|++.+|. .|+||||-|+.+|+.+++-+||.+|+.+..+|++|..||..-
T Consensus        48 kD~~GR~alH~~~S~~k~~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~  126 (1267)
T KOG0783|consen   48 KDRYGRTALHIAVSENKNSFLRWLLQHG-IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFL  126 (1267)
T ss_pred             HHhhccceeeeeeccchhHHHHHHHhcC-ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHH
Confidence            5678999999999999999999999997 99999995 799999999999999999999999999999999999999988


Q ss_pred             HH
Q 007923          368 KR  369 (585)
Q Consensus       368 ~~  369 (585)
                      ++
T Consensus       127 ~r  128 (1267)
T KOG0783|consen  127 SR  128 (1267)
T ss_pred             hh
Confidence            87


No 100
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=98.68  E-value=4.4e-08  Score=79.64  Aligned_cols=86  Identities=28%  Similarity=0.463  Sum_probs=63.5

Q ss_pred             ceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCC-CCcccccccccccccChhHHHHHHHHHhcCCccCCCCccccc
Q 007923           65 DAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQR-GPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVC  143 (585)
Q Consensus        65 Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~-~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v~~c  143 (585)
                      |++|.++ |+.+++||.+|+++|+||+.||.+...+. ...      +...++..++|..+++|+|+|++.+...     
T Consensus         1 dv~i~v~-~~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~------i~l~~~~~~~f~~~l~~ly~~~~~~~~~-----   68 (90)
T smart00225        1 DVTLVVG-GKKFKAHKAVLAACSPYFKALFSGDFKESKKSE------IYLDDVSPEDFRALLEFLYTGKLDLPEE-----   68 (90)
T ss_pred             CeEEEEC-CEEEehHHHHHhhcCHHHHHHHcCCCccCCCCE------EEecCCCHHHHHHHHHeecCceeecCHH-----
Confidence            7889998 99999999999999999999998764332 122      2333478889999999999998654332     


Q ss_pred             cccccccccccCCccchhhhHHHHHHhcChhHHHH
Q 007923          144 VDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVA  178 (585)
Q Consensus       144 l~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~  178 (585)
                                      .....+..|..++..++++
T Consensus        69 ----------------~~~~l~~~a~~~~~~~l~~   87 (90)
T smart00225       69 ----------------NVEELLELADYLQIPGLVE   87 (90)
T ss_pred             ----------------HHHHHHHHHHHHCcHHHHh
Confidence                            1234566777777776654


No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.62  E-value=2.7e-08  Score=106.35  Aligned_cols=79  Identities=10%  Similarity=0.186  Sum_probs=73.3

Q ss_pred             ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCC-CCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCc
Q 007923          220 ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPD-KHTKRIHRALDSDDVELVRMLLKEAH----TNLDDA  294 (585)
Q Consensus       220 in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~  294 (585)
                      .|.+|..|+|+||+|+. .+...++++|+++|++++.   +|. .|+||||.|+..|+++++-+||.+|.    .|.+|.
T Consensus        45 anikD~~GR~alH~~~S-~~k~~~l~wLlqhGidv~v---qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegl  120 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVS-ENKNSFLRWLLQHGIDVFV---QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGL  120 (1267)
T ss_pred             hhHHHhhccceeeeeec-cchhHHHHHHHhcCceeee---ccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCC
Confidence            67899999999999999 7999999999999999999   665 59999999999999999999999995    799999


Q ss_pred             hHHHHHHH
Q 007923          295 HALHYAVA  302 (585)
Q Consensus       295 tpLh~A~~  302 (585)
                      +||..-++
T Consensus       121 splq~~~r  128 (1267)
T KOG0783|consen  121 SPLQFLSR  128 (1267)
T ss_pred             CHHHHHhh
Confidence            99998877


No 102
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.58  E-value=1.4e-07  Score=95.71  Aligned_cols=90  Identities=20%  Similarity=0.195  Sum_probs=57.1

Q ss_pred             CCCCCChH------HHHHHhCCCHHHHHHHHhCCC-CC----CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCC
Q 007923          260 FPDKHTKR------IHRALDSDDVELVRMLLKEAH-TN----LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGY  328 (585)
Q Consensus       260 ~d~~g~t~------Lh~A~~~g~~~~v~~Ll~~g~-~d----~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~  328 (585)
                      +|.+|.|.      ||..++.|+.++.--||..|+ .|    ..|.||||.|++.|+..-+++|+.+| ||+++.|.+|+
T Consensus       123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~d~~Gm  201 (669)
T KOG0818|consen  123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQDSSGM  201 (669)
T ss_pred             CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhcc-CCCCCCCCCCC
Confidence            55555543      566666666666666666663 33    45666666666666666666666665 66666666666


Q ss_pred             hHHHHHHHcCCHHHHHHHHHcC
Q 007923          329 TVLHVAAMRKEPKIIVSLLTKG  350 (585)
Q Consensus       329 TpLh~Aa~~g~~~iv~~Ll~~g  350 (585)
                      ||+.+|-..||-++.+.|++.-
T Consensus       202 tP~~~AR~~gH~~laeRl~e~~  223 (669)
T KOG0818|consen  202 TPVDYARQGGHHELAERLVEIQ  223 (669)
T ss_pred             cHHHHHHhcCchHHHHHHHHHH
Confidence            6666666666666666666643


No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.57  E-value=2.2e-07  Score=94.20  Aligned_cols=87  Identities=26%  Similarity=0.263  Sum_probs=76.5

Q ss_pred             CCCCCCch------HHHHHHHcCCHHHHHHHHhhCCCCcccCCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 007923          288 HTNLDDAH------ALHYAVAYCDAKTTTELLDLGLADVNHRNS-RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDG  360 (585)
Q Consensus       288 ~~d~~g~t------pLh~A~~~g~~~~v~~LL~~~~advn~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G  360 (585)
                      -.|.+|.|      -||-.++.|+.++.-.||..| |++|..+. .|.||||+||..|+..-+++|+=+|||++..|.+|
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lG-A~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~G  200 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLG-AQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSG  200 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcc-cccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCC
Confidence            35555543      489999999999999999998 99998874 79999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCc
Q 007923          361 RKALQISKRLTKAAD  375 (585)
Q Consensus       361 ~TpL~~A~~~~~~~~  375 (585)
                      .||+.+|-..||+..
T Consensus       201 mtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  201 MTPVDYARQGGHHEL  215 (669)
T ss_pred             CcHHHHHHhcCchHH
Confidence            999999999888543


No 104
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.56  E-value=5.3e-08  Score=98.26  Aligned_cols=85  Identities=22%  Similarity=0.238  Sum_probs=77.8

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Q 007923          291 LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTK-GARPSDLTLDGRKALQISKR  369 (585)
Q Consensus       291 ~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-gad~~~~d~~G~TpL~~A~~  369 (585)
                      .++..++++|++.|++..++.+...| .|++.+|.+.+|+||+||..|+++++++|++. +.+++.+|.+|+|||.-|..
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQG-MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhc-ccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            44578999999999999999999888 99999999999999999999999999999985 78999999999999999998


Q ss_pred             cCCCCcc
Q 007923          370 LTKAADY  376 (585)
Q Consensus       370 ~~~~~~~  376 (585)
                      .+|...+
T Consensus       583 F~h~~v~  589 (622)
T KOG0506|consen  583 FKHKEVV  589 (622)
T ss_pred             cCcHHHH
Confidence            8776644


No 105
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.51  E-value=1.2e-07  Score=60.05  Aligned_cols=30  Identities=33%  Similarity=0.451  Sum_probs=24.0

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhhCCCCccc
Q 007923          292 DDAHALHYAVAYCDAKTTTELLDLGLADVNH  322 (585)
Q Consensus       292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~  322 (585)
                      +|+||||+|+..|+.++|++||+.| +|||.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g-advn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHG-ADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcC-CCCCC
Confidence            4788888888888888888888876 88773


No 106
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.51  E-value=1e-07  Score=96.26  Aligned_cols=91  Identities=21%  Similarity=0.201  Sum_probs=82.3

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhCC-C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKEA-H---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA  335 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa  335 (585)
                      ++.++..++++|+..|++..++-+.-.| +   .|.+.+|+||.|+..|+.+++++||+..+.|++.+|.+|+|||.-|.
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            3456678999999999999998777666 3   78899999999999999999999999988999999999999999999


Q ss_pred             HcCCHHHHHHHHHcC
Q 007923          336 MRKEPKIIVSLLTKG  350 (585)
Q Consensus       336 ~~g~~~iv~~Ll~~g  350 (585)
                      ..+|.+++++|-+.-
T Consensus       582 ~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEAQ  596 (622)
T ss_pred             hcCcHHHHHHHHHHh
Confidence            999999999998764


No 107
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.49  E-value=1.9e-07  Score=60.83  Aligned_cols=33  Identities=36%  Similarity=0.535  Sum_probs=29.2

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCC
Q 007923          292 DDAHALHYAVAYCDAKTTTELLDLGLADVNHRNS  325 (585)
Q Consensus       292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~  325 (585)
                      +|+||||+|+..|+.+++++||+.| ++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHG-ADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTT-SCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCc-CCCCCCCC
Confidence            5889999999999999999999987 99998874


No 108
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=98.48  E-value=6.2e-07  Score=91.36  Aligned_cols=81  Identities=20%  Similarity=0.435  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHhcCCCCcccceEEEecC----CCeeechhhhhhcccHHHHHhhcCCCCCC-CCcccccccccccccChh
Q 007923           45 RILSKTLETIFESQDFDYFTDAKIVLST----GREVPVHRCILSSRSGFFKNVFAGTGKQR-GPKFELKELVRDYEVGFD  119 (585)
Q Consensus        45 ~~l~~~l~~l~~~~~~~~~~Dv~i~v~~----~~~~~~Hr~iLaars~~f~~lf~~~~~~~-~~~~~l~~li~~~~v~~~  119 (585)
                      ..+.+-...++.++.   .+|+.|+|++    -+.+|+||.|||..|.+|.+||.+++.+. ...+      ...+|...
T Consensus        99 ~t~~er~~~l~~n~~---~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei------~lpdvepa  169 (521)
T KOG2075|consen   99 ETMRERQAALFNNEL---LADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEI------RLPDVEPA  169 (521)
T ss_pred             hhHHHhhHhhccCcc---cceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCcee------ecCCcChh
Confidence            345556677888888   9999999983    25799999999999999999999987655 3444      44455666


Q ss_pred             HHHHHHHHHhcCCcc
Q 007923          120 PLVAVLAYLYCGKVR  134 (585)
Q Consensus       120 ~~~~lL~ylYtg~l~  134 (585)
                      +|..+|.|+|++.+.
T Consensus       170 aFl~~L~flYsdev~  184 (521)
T KOG2075|consen  170 AFLAFLRFLYSDEVK  184 (521)
T ss_pred             HhHHHHHHHhcchhh
Confidence            999999999997653


No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48  E-value=3.4e-07  Score=94.58  Aligned_cols=84  Identities=27%  Similarity=0.320  Sum_probs=74.4

Q ss_pred             HHHHHhCCCHHHHHHHHhCCC---C-----CCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC
Q 007923          268 IHRALDSDDVELVRMLLKEAH---T-----NLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE  339 (585)
Q Consensus       268 Lh~A~~~g~~~~v~~Ll~~g~---~-----d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~  339 (585)
                      |..|+...++..+-+||.+|.   +     +.+|+|+||+||..|++.+.++|+-+| +|+-.+|..|+|+|.||-+.|.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG-VDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC-ccceecccCCchhhhhHhhccc
Confidence            667788888999999999983   2     356799999999999999999999666 9999999999999999999999


Q ss_pred             HHHHHHHHHcCCC
Q 007923          340 PKIIVSLLTKGAR  352 (585)
Q Consensus       340 ~~iv~~Ll~~gad  352 (585)
                      -+++..||++|.-
T Consensus       707 qec~d~llq~gcp  719 (749)
T KOG0705|consen  707 QECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999974


No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.44  E-value=4.3e-07  Score=93.50  Aligned_cols=56  Identities=27%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhh
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDL  315 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~  315 (585)
                      +|..|.||||+|+.-|+.+.++.|+..|+    .|.+||+|||-|+..|+..++..+|.+
T Consensus        51 ~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   51 RDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH  110 (560)
T ss_pred             ccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence            44444555555555555555555554442    344455555555555554444444433


No 111
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.42  E-value=2.7e-07  Score=94.97  Aligned_cols=82  Identities=27%  Similarity=0.372  Sum_probs=55.3

Q ss_pred             HHHHHHhCCCHHHHHHHHhCC------CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCH
Q 007923          267 RIHRALDSDDVELVRMLLKEA------HTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEP  340 (585)
Q Consensus       267 ~Lh~A~~~g~~~~v~~Ll~~g------~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~  340 (585)
                      |||+++.....+-...++...      ..|..|.||||+|+..|+...++.||..| +++-.+|+.||+|||.|+..|+.
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~-Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAG-ADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcC-CCccccccccccHHHHHHHcCCH
Confidence            477777666555444333222      15566777777777777777777777776 77777777777777777777777


Q ss_pred             HHHHHHHHc
Q 007923          341 KIIVSLLTK  349 (585)
Q Consensus       341 ~iv~~Ll~~  349 (585)
                      .++..+|.+
T Consensus       102 q~i~~vlr~  110 (560)
T KOG0522|consen  102 QIITEVLRH  110 (560)
T ss_pred             HHHHHHHHH
Confidence            777666654


No 112
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.41  E-value=9.3e-07  Score=90.97  Aligned_cols=83  Identities=22%  Similarity=0.324  Sum_probs=50.1

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhhCCCC-cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 007923          289 TNLDDAHALHYAVAYCDAKTTTELLDLGLAD-VNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQIS  367 (585)
Q Consensus       289 ~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ad-vn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A  367 (585)
                      .+.+..|.||||+..|+-++|+++|++++.. ++..|..|.|+||-|+..++..+.++|++.||.+-..|..|.||-.-|
T Consensus       895 ~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~era  974 (1004)
T KOG0782|consen  895 QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERA  974 (1004)
T ss_pred             eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHH
Confidence            3445566666666666666666666665322 344556666666666666666666666666666666666666666655


Q ss_pred             HHcC
Q 007923          368 KRLT  371 (585)
Q Consensus       368 ~~~~  371 (585)
                      -+.+
T Consensus       975 qqa~  978 (1004)
T KOG0782|consen  975 QQAG  978 (1004)
T ss_pred             HhcC
Confidence            5543


No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.25  E-value=2.8e-06  Score=87.50  Aligned_cols=100  Identities=14%  Similarity=0.089  Sum_probs=60.5

Q ss_pred             hhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCC--ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCC
Q 007923          182 RHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIE--ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCG  259 (585)
Q Consensus       182 ~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~d--in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~  259 (585)
                      ..|.++..++.+..+.+|+|+..|+.++|+|+++||..  ++..|..|.|+||.|+. .++..+.++|++.|+.+-.   
T Consensus       887 ~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~-~~~r~vc~~lvdagasl~k---  962 (1004)
T KOG0782|consen  887 LNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC-QRNRAVCQLLVDAGASLRK---  962 (1004)
T ss_pred             hcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH-hcchHHHHHHHhcchhhee---
Confidence            34555555666666666666666666666666666643  44455566666666665 3555566666666666655   


Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHh
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLK  285 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~  285 (585)
                      .|.+|.||-..|-+.|+.++.-||-.
T Consensus       963 td~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  963 TDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             cccCCCChHHHHHhcCCchHHHHHhh
Confidence            56666666666666666666665543


No 114
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.20  E-value=4.7e-06  Score=86.36  Aligned_cols=77  Identities=21%  Similarity=0.183  Sum_probs=38.8

Q ss_pred             CHHHHHHHHHHcCC--CCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHH
Q 007923          239 IVKQIIDLRVELSL--HRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTEL  312 (585)
Q Consensus       239 ~~~~i~~~Ll~~ga--~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~L  312 (585)
                      .....+-+|+.+|.  .+|..+ -+.+|+|+||+||..|++.+.++|+=+|.    .|..|+|+|.||-+.|..+++..|
T Consensus       635 ~Dl~t~~lLLAhg~~~e~~~t~-~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~l  713 (749)
T KOG0705|consen  635 EDLQTAILLLAHGSREEVNETC-GEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVL  713 (749)
T ss_pred             HHHHHHHHHHhccCchhhhccc-cCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHH
Confidence            33444445555553  223322 13344555555555555555555555551    455555555555555555555555


Q ss_pred             HhhC
Q 007923          313 LDLG  316 (585)
Q Consensus       313 L~~~  316 (585)
                      |.+|
T Consensus       714 lq~g  717 (749)
T KOG0705|consen  714 LQYG  717 (749)
T ss_pred             HHcC
Confidence            5554


No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.15  E-value=1.5e-06  Score=97.23  Aligned_cols=79  Identities=35%  Similarity=0.432  Sum_probs=75.9

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923          291 LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL  370 (585)
Q Consensus       291 ~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~  370 (585)
                      ..|.|+||.|+..|...++++||..| +++|..|..|+||||.+...|+...+..|+++||+.+..+.+|.+||++|...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNG-ADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcC-CcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            35789999999999999999999998 99999999999999999999999999999999999999999999999999887


No 116
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.14  E-value=1.6e-06  Score=96.27  Aligned_cols=114  Identities=20%  Similarity=0.237  Sum_probs=93.9

Q ss_pred             CCCCCChHHHHHHhCCCHHHHHHHHhC-C--C--CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHH
Q 007923          260 FPDKHTKRIHRALDSDDVELVRMLLKE-A--H--TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVA  334 (585)
Q Consensus       260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g--~--~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~A  334 (585)
                      ..-.|+|.+|+++..++..+++.+++- |  .  .|.+|.-.+|+ |..++++...+++...|..++.+|..||||||+|
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA  648 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA  648 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence            566899999999999999999999985 4  1  56777778888 4456777777777777799999999999999999


Q ss_pred             HHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCCC
Q 007923          335 AMRKEPKIIVSLLTKGAR------PSDLTLDGRKALQISKRLTKAA  374 (585)
Q Consensus       335 a~~g~~~iv~~Ll~~gad------~~~~d~~G~TpL~~A~~~~~~~  374 (585)
                      +++|+..++..|++.|++      ++..+..|.|+-.+|..+|+..
T Consensus       649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~g  694 (975)
T KOG0520|consen  649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKG  694 (975)
T ss_pred             hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccc
Confidence            999999999999988775      4445567999999998877644


No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.10  E-value=1.2e-05  Score=87.80  Aligned_cols=128  Identities=20%  Similarity=0.162  Sum_probs=68.1

Q ss_pred             HHHHHHHhhHHHHHHHHhcC----CCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHh
Q 007923          198 VVLSVAHMCGKACEKLLERC----IEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALD  273 (585)
Q Consensus       198 l~l~~a~~~~~~~~~Ll~~g----~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~  273 (585)
                      ..+++..|+.-.|+..++..    .++|..|..|+++|++|.. +.+.+++++|++++..+          ..+|.+|+.
T Consensus        29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~-nenle~~eLLl~~~~~~----------gdALL~aI~   97 (822)
T KOG3609|consen   29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAID-NENLELQELLLDTSSEE----------GDALLLAIA   97 (822)
T ss_pred             HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccc-cccHHHHHHHhcCcccc----------chHHHHHHH
Confidence            34455555444444444321    3455555555555555555 45555555555544322          124555555


Q ss_pred             CCCHHHHHHHHhCCCCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 007923          274 SDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARP  353 (585)
Q Consensus       274 ~g~~~~v~~Ll~~g~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~  353 (585)
                      .|.+++|++++.+...    ++-++.               .+ ......-.-+.|||.+||..++.||+++||++|+++
T Consensus        98 ~~~v~~VE~ll~~~~~----~~~~~~---------------~~-d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i  157 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVD----APYLER---------------SG-DANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI  157 (822)
T ss_pred             HHHHHHHHHHHhcccc----cchhcc---------------cc-ccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence            5555555555554320    000111               11 111122345678999999999999999999998876


Q ss_pred             CCC
Q 007923          354 SDL  356 (585)
Q Consensus       354 ~~~  356 (585)
                      ...
T Consensus       158 ~~P  160 (822)
T KOG3609|consen  158 PIP  160 (822)
T ss_pred             CCC
Confidence            543


No 118
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.99  E-value=1.5e-05  Score=78.77  Aligned_cols=68  Identities=25%  Similarity=0.265  Sum_probs=46.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Q 007923          295 HALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKA  363 (585)
Q Consensus       295 tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp  363 (585)
                      --|..||+.|+.+.|+.|++.| .+||.+|....+||.+|+..||..+|++||++||--..-..+|.-.
T Consensus        38 ~elceacR~GD~d~v~~LVetg-vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETG-VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhC-CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            3466777777777777777765 7777777777777777777777777777777777444334455443


No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.99  E-value=6.5e-06  Score=74.06  Aligned_cols=60  Identities=25%  Similarity=0.248  Sum_probs=54.7

Q ss_pred             CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCCCccc
Q 007923          318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG-ARPSDLTLDGRKALQISKRLTKAADYY  377 (585)
Q Consensus       318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~~~~  377 (585)
                      .++|++|..|||||+.|++.|..+.+.+|+.+| +.|...|..|.+++.+|-+.|+.+.+.
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh   63 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVH   63 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHH
Confidence            689999999999999999999999999999999 799999999999999999988877654


No 120
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=97.99  E-value=6.5e-06  Score=77.80  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccc--cccChhHHH
Q 007923           45 RILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRD--YEVGFDPLV  122 (585)
Q Consensus        45 ~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~--~~v~~~~~~  122 (585)
                      +.+..+|+..|+-.-   ..|++|... ...||+||++|++|+|||+.+.....     .++-.+++..  -++..++|.
T Consensus       115 ~sf~kD~ad~ye~k~---c~dldiiFk-eTcfpahRA~laaRCpffK~l~nsd~-----e~~ae~i~dik~ag~dm~~fe  185 (401)
T KOG2838|consen  115 NSFLKDFADGYERKV---CGDLDIIFK-ETCFPAHRAFLAARCPFFKILANSDE-----EPEAEDICDIKFAGFDMDAFE  185 (401)
T ss_pred             hHHHHHHhhhhheee---eccceeeee-eccchHHHHHHHhhCcchhhhccCCC-----CcchhhhhhhhhhccChHHHH
Confidence            456677777777765   779999998 88999999999999999999877552     2222333332  256778999


Q ss_pred             HHHHHHhcCCccC
Q 007923          123 AVLAYLYCGKVRP  135 (585)
Q Consensus       123 ~lL~ylYtg~l~~  135 (585)
                      ++|+|+|+|...+
T Consensus       186 afLh~l~tgEfgm  198 (401)
T KOG2838|consen  186 AFLHSLITGEFGM  198 (401)
T ss_pred             HHHHHHHhcccch
Confidence            9999999997643


No 121
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.97  E-value=2.6e-05  Score=85.23  Aligned_cols=116  Identities=14%  Similarity=0.052  Sum_probs=89.8

Q ss_pred             HHHHHhcChhHHHHHHHhh----ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923          165 LYVSFAFQVPELVALYQRH----LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV  240 (585)
Q Consensus       165 L~~A~~~~~~elv~~ll~~----g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~  240 (585)
                      ...|+..|....|+..++.    ..++|..|.-|.+++++|+.+.+.++.++|+++...+       ..+|.+|+. .+.
T Consensus        29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~-~~~  100 (822)
T KOG3609|consen   29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA-VGS  100 (822)
T ss_pred             HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH-HHH
Confidence            4578888888877766532    2678999999999999999999999999999998776       347888888 799


Q ss_pred             HHHHHHHHHcCCCCCC-------CCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC
Q 007923          241 KQIIDLRVELSLHRSE-------SCGFPDKHTKRIHRALDSDDVELVRMLLKEAH  288 (585)
Q Consensus       241 ~~i~~~Ll~~ga~in~-------~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~  288 (585)
                      .++|++++.+-.....       ....-.-+.|||++||..+|.||+++||..|+
T Consensus       101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen  101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            9999999988543311       00123346788888888888888888888774


No 122
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.81  E-value=2e-05  Score=88.38  Aligned_cols=85  Identities=19%  Similarity=0.231  Sum_probs=76.1

Q ss_pred             CCcccC--CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHH
Q 007923          318 ADVNHR--NSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEI  395 (585)
Q Consensus       318 advn~~--d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~l  395 (585)
                      +++|-.  -..|.|+||.|+..|...++++|+++|+++|.+|..|+||||.+...|+......                +
T Consensus       645 ~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~----------------l  708 (785)
T KOG0521|consen  645 CCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACL----------------L  708 (785)
T ss_pred             hhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhh----------------h
Confidence            445543  2468999999999999999999999999999999999999999999999887765                7


Q ss_pred             HHhhhhcCCcccCCCCHHHHHHh
Q 007923          396 LEQAERRDPLLREASHSFAMAGD  418 (585)
Q Consensus       396 l~~~~~~n~~~~~g~t~Lh~A~~  418 (585)
                      ++++++.+..+.+|.+||++|..
T Consensus       709 l~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  709 LKRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             ccccccccccCccCcchhhHHhh
Confidence            88999999999999999999986


No 123
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.74  E-value=4.5e-05  Score=68.74  Aligned_cols=65  Identities=8%  Similarity=-0.001  Sum_probs=37.2

Q ss_pred             CCccccCCCChhHHhhhcccCCHHHHHHHHHHcC-CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhC
Q 007923          218 IEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELS-LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKE  286 (585)
Q Consensus       218 ~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~g-a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~  286 (585)
                      .+||++|..|||||+.|+. .+..+.+.+|+.+| +.|-.   .|..|.+++.+|-+.|..++|..|-+.
T Consensus         3 ~~in~rD~fgWTalmcaa~-eg~~eavsyllgrg~a~vgv---~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAM-EGSNEAVSYLLGRGVAFVGV---TDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCccchhhhcchHHHHHhh-hcchhHHHHHhccCcccccc---cccccchHHHHHHhcChHHHHHHHHHH
Confidence            3555555556666665555 55555566666555 45555   555555555555555555555555543


No 124
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.52  E-value=7.9e-05  Score=83.25  Aligned_cols=123  Identities=13%  Similarity=-0.075  Sum_probs=90.6

Q ss_pred             cccccccCChHHHHHHHHhhHHHHHHHHhc-CCCccccCCCChhHHhhhcccCCHHHHHH-HHHHcCCCCCCCCCCCCCC
Q 007923          187 ILDKVVADDILVVLSVAHMCGKACEKLLER-CIEITVKSDIDIVTLDKTLPQHIVKQIID-LRVELSLHRSESCGFPDKH  264 (585)
Q Consensus       187 ~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~-g~din~~d~~g~t~L~~A~~~~~~~~i~~-~Ll~~ga~in~~~~~d~~g  264 (585)
                      .......|.+.++|+.+.++.-+++.+++- |......|..|.-.+|+++.  ++.+++- +..-.|..++.   +|..|
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~--lg~ewA~ll~~~~~~ai~i---~D~~G  641 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA--LGYEWAFLPISADGVAIDI---RDRNG  641 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh--cCCceeEEEEeeccccccc---ccCCC
Confidence            334556778888888888888888888875 66666666667777777655  3344433 33456778888   89999


Q ss_pred             ChHHHHHHhCCCHHHHHHHHhCCC-----C-----CCCCchHHHHHHHcCCHHHHHHHHh
Q 007923          265 TKRIHRALDSDDVELVRMLLKEAH-----T-----NLDDAHALHYAVAYCDAKTTTELLD  314 (585)
Q Consensus       265 ~t~Lh~A~~~g~~~~v~~Ll~~g~-----~-----d~~g~tpLh~A~~~g~~~~v~~LL~  314 (585)
                      |||||||+..|+..++..|++.|+     .     +..|.|+--+|...|+..+..+|=+
T Consensus       642 ~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  642 WTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             CcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            999999999999999999997773     1     2458888888888888777666543


No 125
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.44  E-value=0.00048  Score=68.44  Aligned_cols=54  Identities=13%  Similarity=0.070  Sum_probs=27.0

Q ss_pred             HhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC
Q 007923          231 LDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH  288 (585)
Q Consensus       231 L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~  288 (585)
                      |..|+. .|..+.++.|++.|.+||.   .|....+||.+|+-.||.++|++||++|+
T Consensus        40 lceacR-~GD~d~v~~LVetgvnVN~---vD~fD~spL~lAsLcGHe~vvklLLenGA   93 (516)
T KOG0511|consen   40 LCEACR-AGDVDRVRYLVETGVNVNA---VDRFDSSPLYLASLCGHEDVVKLLLENGA   93 (516)
T ss_pred             HHHHhh-cccHHHHHHHHHhCCCcch---hhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence            344444 4445555555555555555   44444455555555555555555555553


No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.07  E-value=0.00096  Score=40.60  Aligned_cols=29  Identities=38%  Similarity=0.454  Sum_probs=22.9

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 007923          326 RGYTVLHVAAMRKEPKIIVSLLTKGARPS  354 (585)
Q Consensus       326 ~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~  354 (585)
                      .|.||||+|+..++.+++++|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            36788888888888888888888877664


No 127
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.56  E-value=0.0026  Score=65.62  Aligned_cols=62  Identities=24%  Similarity=0.238  Sum_probs=50.3

Q ss_pred             HHHHHHHHhhCCCCccc------CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923          306 AKTTTELLDLGLADVNH------RNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISK  368 (585)
Q Consensus       306 ~~~v~~LL~~~~advn~------~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~  368 (585)
                      ...+.+|.+.+ ++.|.      .+.---|+||+|+..|..++|.+||+.|+|+..+|..|+||..++.
T Consensus       404 p~~ie~lken~-lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENL-LSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcC-CcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            44566666655 55543      2444579999999999999999999999999999999999998876


No 128
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=96.40  E-value=0.0031  Score=63.53  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=68.4

Q ss_pred             HHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCC-CcccccccccccccChhHHHHHHHHH
Q 007923           50 TLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRG-PKFELKELVRDYEVGFDPLVAVLAYL  128 (585)
Q Consensus        50 ~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~-~~~~l~~li~~~~v~~~~~~~lL~yl  128 (585)
                      -+++||.+++   =|||.+..- |++-..|+.-|.- |+||..||.|...+++ ..+.++  |++..+..+++.+++.-+
T Consensus        59 iyq~lf~q~e---nSDv~l~al-g~eWrlHk~yL~Q-S~yf~smf~Gtw~es~~~iIqle--I~Dp~Id~~al~~a~gsL  131 (488)
T KOG4682|consen   59 IYQNLFLQGE---NSDVILEAL-GFEWRLHKPYLFQ-SEYFKSMFSGTWKESSMNIIQLE--IPDPNIDVVALQVAFGSL  131 (488)
T ss_pred             HHHHHHhcCC---Ccceehhhc-cceeeeeeeeeec-cHHHHHHhccccChhhCceEEEE--cCCCcccHHHHHHHHhhh
Confidence            4578888888   899999888 9999999999987 8999999999876654 334443  778889999999999999


Q ss_pred             hcCCccCCCC
Q 007923          129 YCGKVRPFPI  138 (585)
Q Consensus       129 Ytg~l~~~~e  138 (585)
                      |.+.+++..+
T Consensus       132 Y~dEveI~l~  141 (488)
T KOG4682|consen  132 YRDEVEIKLS  141 (488)
T ss_pred             hhhheeccHH
Confidence            9998876543


No 129
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.94  E-value=0.013  Score=35.28  Aligned_cols=24  Identities=29%  Similarity=0.353  Sum_probs=13.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhhC
Q 007923          293 DAHALHYAVAYCDAKTTTELLDLG  316 (585)
Q Consensus       293 g~tpLh~A~~~g~~~~v~~LL~~~  316 (585)
                      |.||||+|+..++.++++.|+..+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~   25 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKG   25 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcC
Confidence            455555555555555555555554


No 130
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.82  E-value=0.014  Score=60.34  Aligned_cols=68  Identities=19%  Similarity=0.269  Sum_probs=54.0

Q ss_pred             CHHHHHHHHhCCC-C---------CCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHH
Q 007923          276 DVELVRMLLKEAH-T---------NLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVS  345 (585)
Q Consensus       276 ~~~~v~~Ll~~g~-~---------d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~  345 (585)
                      -...+++|.+++. .         +..--|+||||+..|..++|.+||..+ +|+-.+|..|.||..+++   +.++=..
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~---nkdVk~~  478 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSA---NKDVKSI  478 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccc---cHHHHHH
Confidence            3567788887762 2         233479999999999999999999998 999999999999999887   4444444


Q ss_pred             HH
Q 007923          346 LL  347 (585)
Q Consensus       346 Ll  347 (585)
                      ++
T Consensus       479 F~  480 (591)
T KOG2505|consen  479 FI  480 (591)
T ss_pred             HH
Confidence            44


No 131
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=95.65  E-value=0.0096  Score=56.84  Aligned_cols=86  Identities=22%  Similarity=0.366  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHhcCCCCcccceEEEecCC--------------CeeechhhhhhcccHHHHHhhcCCCC---C--C---
Q 007923           44 LRILSKTLETIFESQDFDYFTDAKIVLSTG--------------REVPVHRCILSSRSGFFKNVFAGTGK---Q--R---  101 (585)
Q Consensus        44 ~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~--------------~~~~~Hr~iLaars~~f~~lf~~~~~---~--~---  101 (585)
                      ...|-.++..+|+..-  .+-|+-+.+.||              .++.||++|.++||+|||.++...-.   +  .   
T Consensus       219 ~kkLd~Dmkglfd~~c--~~d~li~~ssD~elveafggeeNc~deeikahkai~aaRS~ffRnLL~RkiregeE~sdrtl  296 (401)
T KOG2838|consen  219 FKKLDEDMKGLFDQDC--KHDDLIIESSDGELVEAFGGEENCEDEEIKAHKAIAAARSKFFRNLLLRKIREGEEGSDRTL  296 (401)
T ss_pred             chhhhHHHHHHHHhhc--ccCcEEEEeccchhhhhcCCcccchhHHHHHHHHHHHhhhHHHHHHHHHHhhcccccccccc
Confidence            3445566677776643  455665555433              26899999999999999998853221   1  1   


Q ss_pred             -C-CcccccccccccccChhHHHHHHHHHhcCCccC
Q 007923          102 -G-PKFELKELVRDYEVGFDPLVAVLAYLYCGKVRP  135 (585)
Q Consensus       102 -~-~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~  135 (585)
                       . .++.+.++|    ++..-...+++++||+++..
T Consensus       297 r~PkRIifdE~I----~PkafA~i~lhclYTD~lDl  328 (401)
T KOG2838|consen  297 RRPKRIIFDELI----FPKAFAPIFLHCLYTDRLDL  328 (401)
T ss_pred             cCCceeechhhh----cchhhhhhhhhhheecccch
Confidence             0 223333322    12223345789999998764


No 132
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.40  E-value=0.086  Score=49.38  Aligned_cols=88  Identities=22%  Similarity=0.309  Sum_probs=65.0

Q ss_pred             ChHHHHHHhCCCHHHHHHHHhCCC---CC----CCCchHHHHHHH--cCCHHHHHHHHhhCCCCcccC---CCCCChHHH
Q 007923          265 TKRIHRALDSDDVELVRMLLKEAH---TN----LDDAHALHYAVA--YCDAKTTTELLDLGLADVNHR---NSRGYTVLH  332 (585)
Q Consensus       265 ~t~Lh~A~~~g~~~~v~~Ll~~g~---~d----~~g~tpLh~A~~--~g~~~~v~~LL~~~~advn~~---d~~G~TpLh  332 (585)
                      .+++.+|+.++..+++-+|+.+-.   .|    ..+..-+-|+..  ..+..+++.+|..|-++||.+   -+.|.|-|.
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLD  259 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLD  259 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHH
Confidence            466777777777777777776542   11    223333444433  236789999999998999875   568999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCC
Q 007923          333 VAAMRKEPKIIVSLLTKGAR  352 (585)
Q Consensus       333 ~Aa~~g~~~iv~~Ll~~gad  352 (585)
                      -|..+++.+++.+||++||-
T Consensus       260 NA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  260 NAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hHHhcCcHHHHHHHHHcCcc
Confidence            99999999999999999983


No 133
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.34  E-value=0.52  Score=44.37  Aligned_cols=49  Identities=10%  Similarity=0.198  Sum_probs=36.4

Q ss_pred             HHHHHHHHHcC-CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCCC
Q 007923          241 KQIIDLRVELS-LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHT  289 (585)
Q Consensus       241 ~~i~~~Ll~~g-a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~  289 (585)
                      ..|++..+++| +++|..-.+-+.|.|-|--|+++++.+++.+||++|++
T Consensus       230 ~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  230 YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            55777777777 46666444566788888888888888888888888863


No 134
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=89.76  E-value=2.9  Score=38.38  Aligned_cols=46  Identities=26%  Similarity=0.208  Sum_probs=30.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923          296 ALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT  348 (585)
Q Consensus       296 pLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~  348 (585)
                      -|.+|+..|-...+...|+.| -+++      .++|..|+.+++.+|+.+++.
T Consensus       146 hl~~a~~kgll~F~letlkyg-g~~~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYG-GNVD------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcC-Cccc------HHHHHHHHHhhHHHHHHHhhc
Confidence            356677777777777777776 3443      267777777777777776653


No 135
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=86.32  E-value=1.8  Score=33.82  Aligned_cols=48  Identities=19%  Similarity=0.324  Sum_probs=31.1

Q ss_pred             hHHHHHHhCCCHHHHHHHHhCCCCCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923          266 KRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLG  316 (585)
Q Consensus       266 t~Lh~A~~~g~~~~v~~Ll~~g~~d~~g~tpLh~A~~~g~~~~v~~LL~~~  316 (585)
                      .-+..|+..|+.|+++.+++.+..+   ...+..|+..-+.+++++|++..
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~~~---~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNKPD---NDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhccH---HHHHHHHHHHhhHHHHHHHHHhc
Confidence            3466777777777777777655332   44567777776777777777654


No 136
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=83.93  E-value=18  Score=33.31  Aligned_cols=138  Identities=13%  Similarity=0.108  Sum_probs=88.1

Q ss_pred             hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923          162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK  241 (585)
Q Consensus       162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~  241 (585)
                      .-.|..|+.++...+++.+-+...+-   -...++.+-+|+...+.++|+++=   -++...  +-.+-+..|.. +...
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~---qnL~i~--~~~~iFdIA~~-~kDl  117 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIG---QNLHIY--NPEDIFDIAFA-KKDL  117 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHh---hccCCC--Cchhhhhhhhh-ccch
Confidence            45688899999999888876664421   234567788888888999999982   222221  12344455665 4554


Q ss_pred             HHH----HHHHHcCCCCCCCCCCCCC--CChHHHHHHhCCCHHHHHHHHhCC-CCCCCCchHHHHHHHcCCHHHHHHHHh
Q 007923          242 QII----DLRVELSLHRSESCGFPDK--HTKRIHRALDSDDVELVRMLLKEA-HTNLDDAHALHYAVAYCDAKTTTELLD  314 (585)
Q Consensus       242 ~i~----~~Ll~~ga~in~~~~~d~~--g~t~Lh~A~~~g~~~~v~~Ll~~g-~~d~~g~tpLh~A~~~g~~~~v~~LL~  314 (585)
                      ++.    .++.++...-..   .|..  =..-|.+|+..|-...|.-.|++| .++.   +.|..|+.+++.+++.+++.
T Consensus       118 sLyslGY~l~~~~~~~~~~---~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~---~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  118 SLYSLGYKLLFNRMMSEHN---EDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI---IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             hHHHHHHHHHHhhcccccc---cCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH---HHHHHHHHhhHHHHHHHhhc
Confidence            432    223333211101   0110  113467899999999998888888 3443   89999999999999988864


No 137
>PF03931 Skp1_POZ:  Skp1 family, tetramerisation domain;  InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=83.09  E-value=3.7  Score=30.62  Aligned_cols=57  Identities=25%  Similarity=0.241  Sum_probs=42.4

Q ss_pred             eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhc
Q 007923           66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYC  130 (585)
Q Consensus        66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYt  130 (585)
                      ++++-.||+.|.+-+.+.. .|..++.|+.+...+..       .++..+|....+..+++|++.
T Consensus         3 v~L~SsDg~~f~V~~~~a~-~S~~i~~ml~~~~~~~~-------~Ipl~~v~~~~L~kViewc~~   59 (62)
T PF03931_consen    3 VKLVSSDGQEFEVSREAAK-QSKTIKNMLEDLGDEDE-------PIPLPNVSSRILKKVIEWCEH   59 (62)
T ss_dssp             EEEEETTSEEEEEEHHHHT-TSHHHHHHHHCTCCCGT-------EEEETTS-HHHHHHHHHHHHH
T ss_pred             EEEEcCCCCEEEeeHHHHH-HhHHHHHHHhhhccccc-------ccccCccCHHHHHHHHHHHHh
Confidence            5666666899999888776 59999999976532221       466678888999999999863


No 138
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=74.69  E-value=6.1  Score=30.82  Aligned_cols=48  Identities=17%  Similarity=0.140  Sum_probs=40.4

Q ss_pred             chHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 007923          294 AHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTK  349 (585)
Q Consensus       294 ~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~  349 (585)
                      ..-|.+|+..|+.++++.+++.+  .++      ...+..|+..-+-+++++|++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~--~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN--KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh--ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            35679999999999999999765  222      4579999999999999999986


No 139
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=72.97  E-value=15  Score=38.23  Aligned_cols=90  Identities=17%  Similarity=0.226  Sum_probs=60.0

Q ss_pred             eEEEecCCCeeechhhhh--hcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCccCCCCccccc
Q 007923           66 AKIVLSTGREVPVHRCIL--SSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVC  143 (585)
Q Consensus        66 v~i~v~~~~~~~~Hr~iL--aars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v~~c  143 (585)
                      |.|.|+ |+.|.--+--|  +.|-.||.++|++.....+.+-.. -.|   +-.++.|..+|.|+-||.+.+..      
T Consensus        13 V~lNVG-GriF~Ts~qTL~~~~~DSffsaL~s~~~~s~~~~~~~-iFI---DRDPdlFaviLn~LRTg~L~~~g------   81 (465)
T KOG2714|consen   13 VKLNVG-GRIFETSAQTLTWIPRDSFFSALLSGRINSLKDESGA-IFI---DRDPDLFAVILNLLRTGDLDASG------   81 (465)
T ss_pred             EEEecC-ceEEecchhhhhcCCcchHHHHHhcCccccccCCCCc-eEe---cCCchHHHHHHHHHhcCCCCCcc------
Confidence            789998 98777665555  566789999998765332211100 001   33677999999999999875411      


Q ss_pred             cccccccccccCCccchhhhHHH-HHHhcChhHHHHHHH
Q 007923          144 VDDDACSHVACRPAVDFMVEVLY-VSFAFQVPELVALYQ  181 (585)
Q Consensus       144 l~~~~~~~~~c~~~idf~~t~L~-~A~~~~~~elv~~ll  181 (585)
                                     -|....|| -|-.||...++.-|.
T Consensus        82 ---------------~~~~~llhdEA~fYGl~~llrrl~  105 (465)
T KOG2714|consen   82 ---------------VFPERLLHDEAMFYGLTPLLRRLT  105 (465)
T ss_pred             ---------------CchhhhhhhhhhhcCcHHHHHHhh
Confidence                           12245678 788899999888443


No 140
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=63.56  E-value=20  Score=29.72  Aligned_cols=62  Identities=19%  Similarity=0.166  Sum_probs=46.0

Q ss_pred             eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCC
Q 007923           66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGK  132 (585)
Q Consensus        66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~  132 (585)
                      +++.-.||..|.+.+.+.. .|..++.|+.+.......    ...++..+|...++..+++|++.-+
T Consensus         4 v~L~S~Dg~~f~v~~~~a~-~S~~i~~~l~~~~~~~~~----~~~Ipl~~v~~~~L~~Vi~yc~~h~   65 (104)
T smart00512        4 IKLISSDGEVFEVEREVAR-QSKTIKAMIEDLGVDDEN----NNPIPLPNVTSKILSKVIEYCEHHV   65 (104)
T ss_pred             EEEEeCCCCEEEecHHHHH-HHHHHHHHHHccCcccCC----CCCccCCCcCHHHHHHHHHHHHHcc
Confidence            5666666999999999774 699999999754321111    1357777889999999999997754


No 141
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=54.66  E-value=48  Score=31.92  Aligned_cols=94  Identities=18%  Similarity=0.240  Sum_probs=63.2

Q ss_pred             eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCccCCCCccccccc
Q 007923           66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVCVD  145 (585)
Q Consensus        66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v~~cl~  145 (585)
                      |++.|+ |..|.-.+.-|---.-||+.||..+..-.   .+.+..+= -+-++.=|..+|.|+-.|.+.+ |+.    .+
T Consensus         7 vkLnvG-G~~F~Tsk~TLtk~dg~fk~m~e~~i~~~---~d~s~~IF-IDRSpKHF~~ILNfmRdGdv~L-Pe~----~k   76 (230)
T KOG2716|consen    7 VKLNVG-GTIFKTSKSTLTKFDGFFKTMLETDIPVE---KDESGCIF-IDRSPKHFDTILNFMRDGDVDL-PES----EK   76 (230)
T ss_pred             EEEecC-CeEEEeehhhhhhhhhHHHHHhhcCCccc---cCCcCcEE-ecCChhHHHHHHHhhhcccccC-ccc----hH
Confidence            678898 99999999999999999999998764311   11111110 0335567999999999998763 221    11


Q ss_pred             cccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923          146 DDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH  183 (585)
Q Consensus       146 ~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~  183 (585)
                      .              ....+.-|-.+....++++....
T Consensus        77 e--------------l~El~~EA~fYlL~~Lv~~C~~~  100 (230)
T KOG2716|consen   77 E--------------LKELLREAEFYLLDGLVELCQSA  100 (230)
T ss_pred             H--------------HHHHHHHHHHhhHHHHHHHHHHH
Confidence            1              14556777778888888777654


No 142
>PF02214 BTB_2:  BTB/POZ domain;  InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis [].  All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=52.69  E-value=12  Score=30.40  Aligned_cols=65  Identities=15%  Similarity=0.267  Sum_probs=41.4

Q ss_pred             eEEEecCCCeeechhhhhh-cccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhc-CCcc
Q 007923           66 AKIVLSTGREVPVHRCILS-SRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYC-GKVR  134 (585)
Q Consensus        66 v~i~v~~~~~~~~Hr~iLa-ars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYt-g~l~  134 (585)
                      |+|.|+ |+.|..=+..|. ....+|..||.....   .......-.-.-+-.++.|..+|+|+.+ +.+.
T Consensus         1 V~lNVG-G~~f~~~~~tL~~~~~s~l~~~~~~~~~---~~~~~~~~~~fiDRdp~~F~~IL~ylr~~~~l~   67 (94)
T PF02214_consen    1 VRLNVG-GTIFETSRSTLTRYPDSLLARLFSGERS---DDYDDDDGEYFIDRDPELFEYILNYLRTGGKLP   67 (94)
T ss_dssp             EEEEET-TEEEEEEHHHHHTSTTSTTTSHHHTGHG---GGEETTTTEEEESS-HHHHHHHHHHHHHTSSB-
T ss_pred             CEEEEC-CEEEEEcHHHHhhCCCChhhhHHhhccc---cccCCccceEEeccChhhhhHHHHHHhhcCccC
Confidence            689998 999999999997 556688888875300   0000000000113467899999999999 4543


No 143
>PF12313 NPR1_like_C:  NPR1/NIM1 like defence protein C terminal;  InterPro: IPR021094  This entry represents the NPR1/NIM1 like defence protein, which is found in many plant species []. The eukaryotic proteins are typically between 251 and 588 amino acids in length. NPR1/NIM1 like defence protein mediates the binding of TGA factors to the as-1 motif, found in the pathogenesis-related PR-1 gene which leads to the transcriptional regulation of the gene defence. Controls the onset of systemic acquired resistance (SAR) [].
Probab=51.48  E-value=13  Score=34.34  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=33.2

Q ss_pred             hHhHHHHHHHHHHHHhhCcccCCcchHHHHHHhccCC
Q 007923          485 QEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADD  521 (585)
Q Consensus       485 ~~~~~~~~~aL~~~ve~g~~~~p~~~~~l~~~~~~~~  521 (585)
                      .+.+..++..|.+.|.+.|.+||....|.++|.+.|.
T Consensus        51 ~ddL~mrLLyLENRValARllFP~EAkvaMdIA~~d~   87 (207)
T PF12313_consen   51 ADDLHMRLLYLENRVALARLLFPMEAKVAMDIAQADG   87 (207)
T ss_pred             hHhhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHccCc
Confidence            4467888999999999999999999999999998774


No 144
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.04  E-value=45  Score=38.12  Aligned_cols=46  Identities=22%  Similarity=0.174  Sum_probs=32.4

Q ss_pred             chHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHH--HHHcCCHHHHHHHHHc
Q 007923          294 AHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHV--AAMRKEPKIIVSLLTK  349 (585)
Q Consensus       294 ~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~--Aa~~g~~~iv~~Ll~~  349 (585)
                      .+-++.|...|+.+.-..++..+          |..||-|  |+.+|..+..+-|.+.
T Consensus       731 ~~~~qnalYl~dv~ervkIl~n~----------g~~~laylta~~~G~~~~ae~l~ee  778 (1202)
T KOG0292|consen  731 TGQFQNALYLGDVKERVKILENG----------GQLPLAYLTAAAHGLEDQAEKLGEE  778 (1202)
T ss_pred             HHHHHHHHHhccHHHHHHHHHhc----------CcccHHHHHHhhcCcHHHHHHHHHh
Confidence            45566677777777766666666          7778876  4567878888887763


No 145
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=33.31  E-value=9.9  Score=40.62  Aligned_cols=86  Identities=20%  Similarity=0.113  Sum_probs=55.1

Q ss_pred             CCChHHHHHHhCCCHHHHHHHHhCCC--CC---CCCchHHHHHHHc---CCHHHHHHHHhhCCCCcccCCCCCChH---H
Q 007923          263 KHTKRIHRALDSDDVELVRMLLKEAH--TN---LDDAHALHYAVAY---CDAKTTTELLDLGLADVNHRNSRGYTV---L  331 (585)
Q Consensus       263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~--~d---~~g~tpLh~A~~~---g~~~~v~~LL~~~~advn~~d~~G~Tp---L  331 (585)
                      +.+||++.|+..|..+++.+++..+.  ++   .+|..  |.++..   |..+.+..|+..+ +..+.+|..|.-+   |
T Consensus        57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k-~~~~~tda~g~~~~~v~  133 (528)
T KOG1595|consen   57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYK-TLPCVTDARGNCVKNVL  133 (528)
T ss_pred             ccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccc-cccCccccCCCcccCcc
Confidence            44688888888888888888887662  22   23333  444443   3456666666665 8888888777543   5


Q ss_pred             HHHHHcCC---HHHHHHHHHcCC
Q 007923          332 HVAAMRKE---PKIIVSLLTKGA  351 (585)
Q Consensus       332 h~Aa~~g~---~~iv~~Ll~~ga  351 (585)
                      |.|...+-   -..++.|++.+.
T Consensus       134 ~~~~~~~~~~~r~~~~~l~e~~~  156 (528)
T KOG1595|consen  134 HCAFAHGPNDLRPPVEDLLELQG  156 (528)
T ss_pred             cccccCCccccccHHHHHHhccc
Confidence            66666543   357777777663


No 146
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=30.47  E-value=13  Score=37.42  Aligned_cols=55  Identities=18%  Similarity=0.145  Sum_probs=38.7

Q ss_pred             CCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCC
Q 007923           73 GREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGK  132 (585)
Q Consensus        73 ~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~  132 (585)
                      +..+.+|+.+++++++.|+.++.....+....     .+...+.+.+.+..+..|.|+..
T Consensus       109 ~g~~~~~~~~~~a~~~V~~~~~~~d~~~~~~~-----~~~~~d~~~~~~~~~~~F~~~~s  163 (297)
T KOG1987|consen  109 NGFLVAHKLVLVARSEVFEAMGKSDVFKESSK-----LITLLEEKPEVLEALNGFQVLPS  163 (297)
T ss_pred             CcEEEcCceEEEeeecceeeecccccchhccc-----cccccccchhhHhhhceEEEecc
Confidence            56799999999999999999987553221111     11333556678888888888854


No 147
>PF04508 Pox_A_type_inc:  Viral A-type inclusion protein repeat ;  InterPro: IPR007596 The repeat is found in the A-type inclusion protein of the Poxvirus family [].; GO: 0016032 viral reproduction
Probab=28.97  E-value=81  Score=18.48  Aligned_cols=19  Identities=21%  Similarity=0.095  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 007923          536 RLLKRIRYMELQEVVSKAF  554 (585)
Q Consensus       536 ~~~k~~~~~~l~~~l~~~~  554 (585)
                      -.+.|.|+++|+.+|..++
T Consensus         3 ~~rlr~rI~dLer~L~~C~   21 (23)
T PF04508_consen    3 MNRLRNRISDLERQLSECR   21 (23)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            3456789999999998875


No 148
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=26.55  E-value=16  Score=39.72  Aligned_cols=61  Identities=25%  Similarity=0.328  Sum_probs=43.5

Q ss_pred             HHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 007923          301 VAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRK  362 (585)
Q Consensus       301 ~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~T  362 (585)
                      +..+....+-.|.+.+ +.++..|..|.||+|+++..|.+++++.++....+.+.....|.+
T Consensus       404 ~~~~~ss~v~~lik~~-~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~  464 (605)
T KOG3836|consen  404 ALNNSSSLVFTLIKKG-AHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI  464 (605)
T ss_pred             hhcCCccceeeeeccc-CccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence            3333334455555555 899999999999999999999999999998765555444444433


No 149
>KOG2077 consensus JNK/SAPK-associated protein-1 [Signal transduction mechanisms]
Probab=25.36  E-value=89  Score=33.86  Aligned_cols=16  Identities=56%  Similarity=0.584  Sum_probs=12.9

Q ss_pred             HHHHHHHHHHHHHHHH
Q 007923          535 ERLLKRIRYMELQEVV  550 (585)
Q Consensus       535 ~~~~k~~~~~~l~~~l  550 (585)
                      ++.++|+|+||||+.+
T Consensus       407 eRNqYKErLMELqEav  422 (832)
T KOG2077|consen  407 ERNQYKERLMELQEAV  422 (832)
T ss_pred             HHhHHHHHHHHHHHHH
Confidence            5667889999999755


No 150
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=25.23  E-value=14  Score=39.98  Aligned_cols=79  Identities=15%  Similarity=0.058  Sum_probs=56.2

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923          291 LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL  370 (585)
Q Consensus       291 ~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~  370 (585)
                      ..+.+.+||+-..   +....|+... .++|.......++++........+++..++.++..-..+..+|.|+||.+...
T Consensus       104 ~~~a~~~~~~~~~---~~~~~ll~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~  179 (503)
T KOG0513|consen  104 RFGATDILWKFNL---EKAPKLLEKF-DDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTK  179 (503)
T ss_pred             cccccchhhhhhh---cCCCcccccc-ccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccC
Confidence            4456677776544   3344555554 55664455677888888888888888888887777777788899999988876


Q ss_pred             CCC
Q 007923          371 TKA  373 (585)
Q Consensus       371 ~~~  373 (585)
                      ++.
T Consensus       180 ~~~  182 (503)
T KOG0513|consen  180 ENL  182 (503)
T ss_pred             CCc
Confidence            555


No 151
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=24.25  E-value=15  Score=39.73  Aligned_cols=99  Identities=19%  Similarity=0.087  Sum_probs=63.1

Q ss_pred             CCCCChHHHHHHhCCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH
Q 007923          261 PDKHTKRIHRALDSDDVELVRMLLKEA-HT---NLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM  336 (585)
Q Consensus       261 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~---d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~  336 (585)
                      ...+-+.+||+...+.   ...|+... +.   .....++++..+.......+..++... ..-......|.|+||.+..
T Consensus       103 P~~~a~~~~~~~~~~~---~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~-~~~~~~~~~g~t~L~~tl~  178 (503)
T KOG0513|consen  103 PRFGATDILWKFNLEK---APKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKY-EIADAREVLGNTKLHLTLT  178 (503)
T ss_pred             ccccccchhhhhhhcC---CCccccccccccccccccccceeeeecCccccceeeccccc-ccchhhhhcCCceeeeecc
Confidence            4455666666543322   22333333 12   244578899988888888888888743 6777777899999999998


Q ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 007923          337 RKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK  372 (585)
Q Consensus       337 ~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  372 (585)
                      .++.  ++.       +...|.++.+|+++.+....
T Consensus       179 ~~~~--~~~-------i~~ldl~~~~P~lf~~~~~~  205 (503)
T KOG0513|consen  179 KENL--LVV-------IPCLDLKSLTPNLFSIYDAL  205 (503)
T ss_pred             CCCc--ceE-------EEeeccCcCCceeeeeeccc
Confidence            8776  222       22334445778877766533


No 152
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.64  E-value=68  Score=29.88  Aligned_cols=40  Identities=23%  Similarity=0.298  Sum_probs=19.5

Q ss_pred             hHHHHHHHcCCHHHHH-HHHHcCCC----CCCCCCCCCCHHHHHH
Q 007923          329 TVLHVAAMRKEPKIIV-SLLTKGAR----PSDLTLDGRKALQISK  368 (585)
Q Consensus       329 TpLh~Aa~~g~~~iv~-~Ll~~gad----~~~~d~~G~TpL~~A~  368 (585)
                      .|||-|+.-++.+++- ++++..+.    +|..|.+|-.+|.+|.
T Consensus       224 ~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL  268 (280)
T KOG4591|consen  224 NPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIAL  268 (280)
T ss_pred             chhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHH
Confidence            4555555555555432 34444332    3445555555555554


No 153
>PF11822 DUF3342:  Domain of unknown function (DUF3342);  InterPro: IPR021777  This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain. 
Probab=20.45  E-value=4.5e+02  Score=26.75  Aligned_cols=70  Identities=16%  Similarity=0.180  Sum_probs=44.6

Q ss_pred             eEEEecC-----CCeeechhhhhhcccHHHHHhhcCCC--CCCCCcccccccccccccChhHHHHHHHHHhcCCccCCCC
Q 007923           66 AKIVLST-----GREVPVHRCILSSRSGFFKNVFAGTG--KQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPI  138 (585)
Q Consensus        66 v~i~v~~-----~~~~~~Hr~iLaars~~f~~lf~~~~--~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e  138 (585)
                      |+|.|-|     -+.|.|.|-.|-..=.||+..+....  ......++++-     .-+-.+|.=+++|+....-.+.++
T Consensus         1 v~ihV~De~~~~~rdF~C~~~lL~~~M~YF~~~l~~~~~~~~~~~~idisV-----hCDv~iF~WLm~yv~~~~p~l~~~   75 (317)
T PF11822_consen    1 VVIHVCDEARNEKRDFTCPRDLLVSEMRYFAEYLSRYINDSQRWEEIDISV-----HCDVHIFEWLMRYVKGEPPSLTPS   75 (317)
T ss_pred             CEEEEEcCCCCcceeeeccHHHHHHhhHHHHHHHhhcccccCcCCCcceEE-----ecChhHHHHHHHHhhcCCCcCCcC
Confidence            4566643     36799999999999999999996411  11113333331     112348999999998865555444


Q ss_pred             cc
Q 007923          139 GV  140 (585)
Q Consensus       139 ~v  140 (585)
                      +|
T Consensus        76 Nv   77 (317)
T PF11822_consen   76 NV   77 (317)
T ss_pred             cE
Confidence            43


Done!