Query 007923
Match_columns 585
No_of_seqs 824 out of 4527
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:50:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 9.1E-44 3.1E-48 379.7 35.1 366 161-555 14-401 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 6.6E-44 2.3E-48 380.8 30.1 316 162-486 48-385 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 2.9E-42 9.8E-47 355.3 24.1 279 162-473 26-328 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 3.1E-40 1.1E-44 330.0 25.9 246 162-427 6-271 (285)
5 2xai_A ASB-9, ankyrin repeat a 100.0 3.3E-40 1.1E-44 327.5 16.9 202 162-370 4-209 (261)
6 1wdy_A 2-5A-dependent ribonucl 100.0 3.6E-39 1.2E-43 322.3 22.6 263 192-475 3-282 (285)
7 3d9h_A CDNA FLJ77766, highly s 100.0 6.6E-40 2.3E-44 329.8 17.3 236 161-418 15-264 (285)
8 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-39 9.2E-44 321.0 18.5 243 193-457 2-253 (261)
9 3utm_A Tankyrase-1; tankyrase, 100.0 2.2E-38 7.6E-43 326.6 25.6 269 160-449 23-320 (351)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 4E-39 1.4E-43 318.1 16.2 216 186-422 2-236 (253)
11 3b7b_A Euchromatic histone-lys 100.0 2.2E-37 7.5E-42 301.8 22.6 217 185-422 2-223 (237)
12 3utm_A Tankyrase-1; tankyrase, 100.0 2.6E-37 8.9E-42 318.6 23.9 265 161-453 58-350 (351)
13 3ljn_A Hypothetical protein; a 100.0 4E-38 1.4E-42 327.8 17.1 255 161-435 20-315 (364)
14 1oy3_D Transcription factor in 100.0 1.8E-37 6.2E-42 310.1 21.2 205 162-371 10-269 (282)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 4.9E-38 1.7E-42 310.3 16.5 213 161-378 10-241 (253)
16 2fo1_E LIN-12 protein; beta-ba 100.0 7.4E-39 2.5E-43 334.8 10.6 245 162-439 95-367 (373)
17 1oy3_D Transcription factor in 100.0 1E-37 3.4E-42 311.9 17.8 211 187-418 2-267 (282)
18 4b93_B Ankyrin repeat domain-c 100.0 4E-38 1.4E-42 314.0 14.6 205 162-371 12-229 (269)
19 3b7b_A Euchromatic histone-lys 100.0 3.5E-37 1.2E-41 300.4 21.0 207 162-373 12-223 (237)
20 1k1a_A B-cell lymphoma 3-encod 100.0 2.2E-37 7.6E-42 302.2 19.1 209 189-418 4-225 (241)
21 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-36 4.6E-41 312.9 24.6 262 191-473 22-300 (337)
22 3ljn_A Hypothetical protein; a 100.0 5.7E-38 1.9E-42 326.7 13.8 222 184-428 10-263 (364)
23 1k1a_A B-cell lymphoma 3-encod 100.0 2.1E-37 7.3E-42 302.4 16.9 213 161-378 9-234 (241)
24 3aji_A 26S proteasome non-ATPa 100.0 1E-36 3.6E-41 295.8 19.7 207 162-373 7-218 (231)
25 4b93_B Ankyrin repeat domain-c 100.0 3.3E-37 1.1E-41 307.3 14.2 212 189-420 6-229 (269)
26 3d9h_A CDNA FLJ77766, highly s 100.0 1.7E-36 5.9E-41 304.9 19.0 201 162-369 60-264 (285)
27 2dzn_A Probable 26S proteasome 100.0 2.7E-36 9.3E-41 292.1 19.6 204 162-369 3-217 (228)
28 2fo1_E LIN-12 protein; beta-ba 100.0 5.2E-37 1.8E-41 320.8 14.4 215 160-378 124-364 (373)
29 1s70_B 130 kDa myosin-binding 100.0 1.3E-36 4.6E-41 307.0 14.8 229 162-418 41-274 (299)
30 3aji_A 26S proteasome non-ATPa 100.0 2.7E-35 9.2E-40 285.9 22.0 216 192-428 4-224 (231)
31 1s70_B 130 kDa myosin-binding 100.0 3.6E-36 1.2E-40 303.8 15.1 196 161-369 73-274 (299)
32 2dzn_A Probable 26S proteasome 100.0 2.2E-35 7.4E-40 285.8 19.3 208 194-419 2-218 (228)
33 2f8y_A Notch homolog 1, transl 100.0 1.9E-35 6.4E-40 285.3 16.6 202 172-378 2-209 (223)
34 3eu9_A Huntingtin-interacting 100.0 6.6E-35 2.2E-39 283.9 19.6 215 159-378 7-228 (240)
35 1sw6_A Regulatory protein SWI6 100.0 1.8E-36 6.3E-41 310.8 6.7 251 171-453 29-327 (327)
36 2f8y_A Notch homolog 1, transl 100.0 4.3E-35 1.5E-39 282.8 15.6 202 205-427 2-209 (223)
37 3kea_A K1L; tropism, ANK repea 100.0 2.2E-35 7.5E-40 296.8 13.2 218 162-409 32-254 (285)
38 3eu9_A Huntingtin-interacting 100.0 6.3E-34 2.1E-38 277.0 20.8 218 187-424 2-225 (240)
39 3kea_A K1L; tropism, ANK repea 100.0 1.6E-34 5.4E-39 290.6 16.7 210 171-406 10-225 (285)
40 2rfa_A Transient receptor pote 100.0 4.5E-33 1.5E-37 270.4 18.4 179 194-377 3-214 (232)
41 1ikn_D Protein (I-kappa-B-alph 100.0 5.4E-35 1.8E-39 285.1 4.8 180 190-374 4-198 (236)
42 2rfa_A Transient receptor pote 100.0 4.6E-33 1.6E-37 270.4 17.9 192 162-358 4-228 (232)
43 4gpm_A Engineered protein OR26 100.0 8.6E-33 3E-37 255.3 18.2 155 196-355 6-164 (169)
44 1sw6_A Regulatory protein SWI6 100.0 4.4E-34 1.5E-38 293.1 9.0 219 172-418 58-325 (327)
45 1ikn_D Protein (I-kappa-B-alph 100.0 4.2E-34 1.4E-38 278.7 7.6 203 162-369 9-228 (236)
46 3hra_A Ankyrin repeat family p 100.0 5.3E-32 1.8E-36 256.7 20.0 185 161-350 5-201 (201)
47 3hra_A Ankyrin repeat family p 100.0 2.8E-32 9.5E-37 258.7 17.7 183 192-378 3-196 (201)
48 2etb_A Transient receptor pote 100.0 1.2E-32 4.1E-37 271.9 13.7 188 161-353 2-247 (256)
49 2pnn_A Transient receptor pote 100.0 1.8E-32 6.1E-37 273.4 12.1 200 161-365 13-272 (273)
50 4gpm_A Engineered protein OR26 100.0 1.2E-31 3.9E-36 247.7 16.4 145 229-378 6-154 (169)
51 2etb_A Transient receptor pote 100.0 1.8E-32 6.3E-37 270.5 11.6 183 194-378 2-239 (256)
52 2pnn_A Transient receptor pote 100.0 4.3E-32 1.5E-36 270.6 14.1 208 216-432 2-256 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 4.4E-31 1.5E-35 261.1 12.9 190 160-354 4-252 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 1.1E-30 3.9E-35 258.1 12.6 182 192-378 3-243 (260)
55 4hbd_A KN motif and ankyrin re 100.0 8.2E-30 2.8E-34 254.9 15.9 186 162-350 77-273 (276)
56 4hbd_A KN motif and ankyrin re 100.0 3.9E-30 1.3E-34 257.2 11.9 179 195-378 77-268 (276)
57 3v30_A DNA-binding protein rfx 100.0 1.6E-29 5.4E-34 233.8 14.8 165 194-363 2-171 (172)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 9.9E-29 3.4E-33 225.8 17.3 154 193-352 4-162 (162)
59 2rfm_A Putative ankyrin repeat 100.0 4.3E-29 1.5E-33 235.3 14.8 159 187-350 28-190 (192)
60 2rfm_A Putative ankyrin repeat 100.0 2.7E-29 9.4E-34 236.6 13.0 153 220-377 28-184 (192)
61 3v30_A DNA-binding protein rfx 100.0 6.9E-29 2.3E-33 229.5 14.8 165 227-412 2-171 (172)
62 2vge_A RELA-associated inhibit 100.0 2.9E-31 9.8E-36 257.9 -2.4 154 210-368 1-164 (229)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.2E-28 1.4E-32 223.7 17.8 154 192-350 12-169 (169)
64 3v31_A Ankyrin repeat family A 100.0 2.5E-28 8.7E-33 224.5 16.3 143 227-374 3-149 (167)
65 3v31_A Ankyrin repeat family A 100.0 2.9E-28 9.8E-33 224.1 14.8 157 193-354 2-162 (167)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.3E-28 1.8E-32 223.1 15.1 150 224-378 11-164 (169)
67 2vge_A RELA-associated inhibit 100.0 4.6E-30 1.6E-34 249.4 1.2 201 244-462 1-208 (229)
68 3f6q_A Integrin-linked protein 100.0 6.9E-28 2.3E-32 224.4 14.9 163 193-360 4-171 (179)
69 1ihb_A P18-INK4C(INK6), cyclin 100.0 5E-28 1.7E-32 221.1 12.9 148 225-378 3-155 (162)
70 1awc_B Protein (GA binding pro 99.9 2.2E-27 7.5E-32 215.1 16.0 142 227-374 2-147 (153)
71 2aja_A Ankyrin repeat family p 99.9 6.6E-30 2.2E-34 265.7 -2.6 191 162-376 66-270 (376)
72 1awc_B Protein (GA binding pro 99.9 4.4E-27 1.5E-31 213.0 16.0 147 194-346 2-152 (153)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.4E-28 1.5E-32 236.9 9.8 161 225-407 3-170 (239)
74 3twr_A Tankyrase-2; ankyrin re 99.9 2.1E-27 7.2E-32 217.8 12.9 155 191-351 5-164 (165)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-26 3.8E-31 210.8 17.5 149 194-349 2-155 (156)
76 3f6q_A Integrin-linked protein 99.9 1.3E-27 4.4E-32 222.6 11.1 164 225-409 3-171 (179)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-28 7.4E-33 239.1 4.9 175 192-372 3-193 (239)
78 3twr_A Tankyrase-2; ankyrin re 99.9 3.1E-27 1.1E-31 216.7 9.9 145 223-373 4-153 (165)
79 2aja_A Ankyrin repeat family p 99.9 6.1E-29 2.1E-33 258.4 -4.0 255 171-463 44-340 (376)
80 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.8E-26 9.5E-31 208.2 13.4 144 227-377 2-150 (156)
81 1d9s_A Cyclin-dependent kinase 99.9 1.6E-26 5.5E-31 205.1 10.4 130 217-352 2-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.3E-26 4.3E-31 210.9 9.1 142 221-368 6-152 (156)
83 1d9s_A Cyclin-dependent kinase 99.9 4.3E-25 1.5E-29 195.9 10.5 122 251-377 2-128 (136)
84 3t8k_A Uncharacterized protein 99.9 2E-25 6.9E-30 209.2 6.6 155 196-357 8-184 (186)
85 3t8k_A Uncharacterized protein 99.9 1.5E-25 5E-30 210.2 4.3 144 227-377 6-171 (186)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.8E-24 2.7E-28 184.0 13.4 122 226-352 1-126 (126)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-24 1.4E-28 194.3 11.2 141 188-334 6-151 (156)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-23 3.4E-28 187.0 13.4 122 224-350 11-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 3.1E-24 1.1E-28 190.4 7.8 116 251-371 1-120 (137)
90 3ui2_A Signal recognition part 99.9 1.3E-24 4.4E-29 213.1 5.0 161 226-428 14-179 (244)
91 3c5r_A BARD-1, BRCA1-associate 99.9 4.1E-24 1.4E-28 189.6 5.7 130 217-352 1-134 (137)
92 3deo_A Signal recognition part 99.9 6.7E-23 2.3E-27 191.4 13.2 108 261-370 41-153 (183)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.5E-22 5.2E-27 175.8 12.4 115 263-378 1-119 (126)
94 3aaa_C Myotrophin, protein V-1 99.9 1.9E-22 6.5E-27 175.3 12.8 108 260-368 3-114 (123)
95 3ui2_A Signal recognition part 99.9 1.2E-24 4.3E-29 213.1 -2.9 166 263-463 14-181 (244)
96 2jab_A H10-2-G3; HER2, darpin, 99.9 3.1E-22 1.1E-26 177.3 12.7 123 161-287 14-136 (136)
97 3ehr_A Osteoclast-stimulating 99.9 2.9E-23 1E-27 200.0 6.4 134 223-361 69-207 (222)
98 2b0o_E UPLC1; arfgap, structur 99.9 1E-22 3.5E-27 205.7 10.7 142 224-373 148-299 (301)
99 3deo_A Signal recognition part 99.9 1.7E-23 5.9E-28 195.5 2.8 136 191-349 41-181 (183)
100 3aaa_C Myotrophin, protein V-1 99.9 3.8E-22 1.3E-26 173.4 10.2 115 289-420 3-117 (123)
101 3ehr_A Osteoclast-stimulating 99.8 1.3E-21 4.6E-26 188.3 8.1 112 260-371 69-184 (222)
102 2b0o_E UPLC1; arfgap, structur 99.8 1.4E-21 4.9E-26 197.4 8.2 140 191-340 148-299 (301)
103 3jue_A Arfgap with coiled-coil 99.8 9.3E-21 3.2E-25 196.1 14.2 144 223-371 195-348 (368)
104 3lvq_E ARF-GAP with SH3 domain 99.8 9.2E-21 3.1E-25 205.1 13.7 135 227-369 132-276 (497)
105 1dcq_A PYK2-associated protein 99.8 3.8E-20 1.3E-24 184.7 16.0 186 162-352 67-263 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.4E-20 1.2E-24 152.6 11.6 89 263-352 1-93 (93)
107 1dcq_A PYK2-associated protein 99.8 2.3E-19 7.8E-24 179.1 19.4 115 263-378 129-256 (278)
108 2l6b_A NR1C; ankyrin, consensu 99.8 9.2E-21 3.1E-25 162.5 6.5 104 260-364 5-112 (115)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.3E-20 2.5E-24 150.6 9.0 86 292-378 1-86 (93)
110 3lvq_E ARF-GAP with SH3 domain 99.8 1.9E-19 6.4E-24 194.8 14.2 130 196-336 134-276 (497)
111 3jue_A Arfgap with coiled-coil 99.8 1.7E-19 5.9E-24 186.6 11.1 158 193-354 198-366 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1E-19 3.5E-24 155.9 4.2 108 289-413 5-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 3.7E-17 1.3E-21 138.9 10.1 85 289-374 20-104 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.3E-16 4.4E-21 135.5 10.1 86 260-346 20-109 (110)
115 2if5_A Zinc finger and BTB dom 99.6 4.7E-15 1.6E-19 128.0 11.8 110 42-181 7-116 (120)
116 1r29_A B-cell lymphoma 6 prote 99.6 5.9E-15 2E-19 128.7 11.9 110 42-181 11-120 (127)
117 3b84_A Zinc finger and BTB dom 99.6 5.1E-15 1.7E-19 127.5 11.3 107 42-182 6-112 (119)
118 2yy9_A Zinc finger and BTB dom 99.6 3.9E-15 1.3E-19 131.2 10.1 109 41-183 6-114 (135)
119 2q81_A MIZ-1 protein; BTB/POZ 99.6 9.5E-15 3.2E-19 125.8 11.3 106 41-181 8-113 (119)
120 2vpk_A Myoneurin; transcriptio 99.6 1.6E-14 5.5E-19 123.8 12.1 108 42-181 4-111 (116)
121 2ppi_A Gigaxonin; BTB domain, 99.6 9.3E-15 3.2E-19 130.2 10.8 114 40-181 27-140 (144)
122 2z8h_A Transcription regulator 99.6 1.7E-14 5.7E-19 127.7 12.2 109 42-182 18-127 (138)
123 1buo_A POZ domain, protein (pr 99.6 1.6E-14 5.4E-19 124.8 11.6 105 42-181 10-114 (121)
124 3ohu_A Transcription regulator 99.6 4.6E-15 1.6E-19 129.1 7.3 87 41-138 13-100 (125)
125 2ihc_A Transcription regulator 99.5 8.9E-15 3E-19 127.0 7.4 84 42-136 11-95 (124)
126 3fkc_A Transcriptional regulat 99.5 1.1E-14 3.8E-19 124.7 7.7 80 40-133 11-90 (116)
127 3hqi_A Speckle-type POZ protei 99.5 3.1E-14 1E-18 144.3 10.4 144 9-183 121-267 (312)
128 3htm_A Speckle-type POZ protei 99.5 7.4E-14 2.5E-18 128.5 9.7 107 46-182 20-126 (172)
129 3ga1_A Nucleus accumbens-assoc 99.5 5.3E-14 1.8E-18 123.0 7.3 84 42-137 15-98 (129)
130 2vkp_A BTB/POZ domain-containi 99.5 7.6E-14 2.6E-18 118.1 7.2 97 54-181 2-102 (109)
131 4eoz_A Speckle-type POZ protei 99.5 6.7E-14 2.3E-18 125.0 7.1 109 45-183 10-118 (145)
132 3hve_A Gigaxonin; ubiquitin, c 99.4 2.9E-13 9.9E-18 133.0 10.4 113 41-181 12-124 (256)
133 3i3n_A Kelch-like protein 11; 99.4 3.4E-13 1.2E-17 134.3 9.1 116 42-181 14-132 (279)
134 3m5b_A Zinc finger and BTB dom 99.3 7.1E-13 2.4E-17 113.7 6.2 97 46-183 18-114 (119)
135 4ajy_C Transcription elongatio 97.8 2.8E-05 9.5E-10 63.4 5.8 58 66-129 4-63 (97)
136 2ast_A S-phase kinase-associat 97.6 0.00015 5.1E-09 64.9 8.8 63 66-134 3-67 (159)
137 1fs1_B SKP1, cyclin A/CDK2-ass 96.2 0.014 4.8E-07 50.8 8.0 58 66-133 4-61 (141)
138 2p1m_A SKP1-like protein 1A; F 94.9 0.0065 2.2E-07 54.1 1.0 60 66-134 6-65 (160)
139 1hv2_A Elongin C, ELC1; protei 94.6 0.055 1.9E-06 43.8 5.8 60 66-132 6-65 (99)
140 2fnj_C Transcription elongatio 94.4 0.058 2E-06 43.3 5.5 63 66-132 3-65 (96)
141 3drz_A BTB/POZ domain-containi 92.5 0.38 1.3E-05 39.3 7.5 93 65-183 7-103 (107)
142 3v7d_A Suppressor of kinetocho 84.4 4.1 0.00014 36.1 8.8 68 65-134 8-75 (169)
143 1vcb_B Protein (elongin C); tu 82.3 2.2 7.5E-05 35.0 5.6 63 66-132 19-81 (112)
144 3drx_A BTB/POZ domain-containi 68.4 9.9 0.00034 34.5 6.5 96 65-183 13-109 (202)
145 3kvt_A Potassium channel prote 49.8 11 0.00036 31.0 3.0 66 66-137 7-73 (115)
146 3ukw_C Bimax1 peptide; arm rep 41.1 9 0.00031 21.5 0.8 8 576-583 19-26 (28)
147 2ezd_A High mobility group pro 23.4 37 0.0013 19.3 1.4 10 573-582 2-11 (26)
148 1t1d_A Protein (potassium chan 22.3 41 0.0014 26.6 2.1 63 66-136 3-69 (100)
149 1s1g_A Potassium voltage-gated 21.3 89 0.0031 25.7 4.0 64 65-136 14-79 (124)
150 1nn7_A Potassium channel KV4.2 20.4 73 0.0025 25.3 3.3 63 66-136 2-66 (105)
151 3gna_A RAG-1, V(D)J recombinat 20.2 84 0.0029 23.3 3.1 24 536-561 33-56 (96)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.1e-44 Score=379.67 Aligned_cols=366 Identities=15% Similarity=0.156 Sum_probs=296.4
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
..||||+|+..|..+++++|+++|++++..+..|.||+++|+..++.+++++|+++|+++|.++..|.||||+|+. .++
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~g~ 92 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAAR-IGH 92 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHH-HTC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH-CCC
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLG 316 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~ 316 (585)
.+++++|+++|++++. .+..|.||||+|+..|+.++|++|++.+. .+..|.||||+|+..|+.+++++|++.+
T Consensus 93 ~~~v~~Ll~~ga~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 169 (437)
T 1n11_A 93 TNMVKLLLENNANPNL---ATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 169 (437)
T ss_dssp HHHHHHHHHHTCCTTC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCC---CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 9999999999999999 89999999999999999999999999883 5678999999999999999999999987
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----------CCcccccCcCCCCC
Q 007923 317 LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK----------AADYYIPTEEGKTT 386 (585)
Q Consensus 317 ~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~----------~~~~~~~~~~g~t~ 386 (585)
+++|..+..|.||||+|+..|+.+++++|+++|++++..+.+|+||||+|+..++ +.+++..+..|.||
T Consensus 170 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 248 (437)
T 1n11_A 170 -AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 248 (437)
T ss_dssp -CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred -CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999998755 56677778888888
Q ss_pred cc------c-chHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccc
Q 007923 387 PK------D-RLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFAL 459 (585)
Q Consensus 387 ~~------~-~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~ 459 (585)
+. . .....|++.+.+++..+..|.||||+|+..++..++.+.-..++.....+..|+||||+|+..|+.+++.
T Consensus 249 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 328 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK 328 (437)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 31 2 2233456778888999999999999999988888887777777777778899999999999999999999
Q ss_pred cccccccccCcCCccccC-CCCcccchHhHHHHHHHHHHHHhhCcccCCcchHHHHHHhccCCcccccCCCCCChHHHHH
Q 007923 460 DGIKTKKMAGAQRTTVDL-NEAPFKMQEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADDLNQLACPGNDTPEERLL 538 (585)
Q Consensus 460 ~l~~~~~~~~~~~~~~d~-~~~p~~~~~~~~~~~~aL~~~ve~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~ 538 (585)
++.. .|++....+. ..+| |..++..|. .++++-+++...-++.....+.||-+- .
T Consensus 329 ~Ll~----~gad~n~~~~~g~t~-------------L~~A~~~g~------~~iv~~Ll~~ga~~~~~~~~g~t~l~~-A 384 (437)
T 1n11_A 329 FLLQ----HQADVNAKTKLGYSP-------------LHQAAQQGH------TDIVTLLLKNGASPNEVSSDGTTPLAI-A 384 (437)
T ss_dssp HHHH----TTCCTTCCCTTSCCH-------------HHHHHHTTC------HHHHHHHHHTTCCSCCCCSSSCCHHHH-H
T ss_pred HHHh----cCCCCCCCCCCCCCH-------------HHHHHHCCh------HHHHHHHHHCcCCCCCCCCCCCCHHHH-H
Confidence 8887 5555443332 2333 343443331 233333444332234444556676443 2
Q ss_pred HHHHHHHHHHHHHHHhh
Q 007923 539 KRIRYMELQEVVSKAFN 555 (585)
Q Consensus 539 k~~~~~~l~~~l~~~~~ 555 (585)
++..+.++.+.|.....
T Consensus 385 ~~~g~~~~~~~l~~~~~ 401 (437)
T 1n11_A 385 KRLGYISVTDVLKVVTD 401 (437)
T ss_dssp HHTTCHHHHHHHHHHCC
T ss_pred HHcCcHHHHHHHHhccc
Confidence 33444555566655443
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-44 Score=380.76 Aligned_cols=316 Identities=16% Similarity=0.128 Sum_probs=274.1
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++..+..|.||||+|+. .++.
T Consensus 48 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~-~g~~ 126 (437)
T 1n11_A 48 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAR-EGHV 126 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH-HTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-cCCH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999998 6889
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923 242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL 317 (585)
Q Consensus 242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ 317 (585)
+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|. .+..|.||||+|+..|+.+++++|+..+
T Consensus 127 ~~v~~Ll~~~~~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g- 202 (437)
T 1n11_A 127 ETVLALLEKEASQAC---MTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG- 202 (437)
T ss_dssp HHHHHHHHTTCCSCC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGT-
T ss_pred HHHHHHHhCCCCCcC---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-
Confidence 999999999999888 78889999999999999999999999883 5578899999999999999999999887
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----------CCcccccCcCCCCCc
Q 007923 318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK----------AADYYIPTEEGKTTP 387 (585)
Q Consensus 318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~----------~~~~~~~~~~g~t~~ 387 (585)
++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ +++++..+..|.||+
T Consensus 203 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 282 (437)
T 1n11_A 203 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 282 (437)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 8999999999999999999999999999999999999999999999999998754 666777788888873
Q ss_pred c------c-chHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCcccccc
Q 007923 388 K------D-RLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALD 460 (585)
Q Consensus 388 ~------~-~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~ 460 (585)
. . .....|++.+.+++.++..|.||||+|+..++.+++.++-..+......+..|+||||+|+..|+.+++.+
T Consensus 283 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~ 362 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTL 362 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHH
Confidence 1 1 22334577889999999999999999999988888888777777777889999999999999999999999
Q ss_pred ccccccccCcCCccccCC-CCcccchH
Q 007923 461 GIKTKKMAGAQRTTVDLN-EAPFKMQE 486 (585)
Q Consensus 461 l~~~~~~~~~~~~~~d~~-~~p~~~~~ 486 (585)
+.. .|++....+.. .+|+.+..
T Consensus 363 Ll~----~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 363 LLK----NGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp HHH----TTCCSCCCCSSSCCHHHHHH
T ss_pred HHH----CcCCCCCCCCCCCCHHHHHH
Confidence 987 67776655443 56766543
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.9e-42 Score=355.28 Aligned_cols=279 Identities=15% Similarity=0.051 Sum_probs=248.4
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccc-cCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVV-ADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~-~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
.|+||.|+..|..++|++|+++|+++|.++. .|.|||++|+..++.+++++|+++|++++.++..+.++++.++. .+.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~-~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI-AGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-HTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh-ccc
Confidence 7899999999999999999999999998876 48999999999999999999999999999999999999999999 688
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-C-------------CCCCchHHHHHHHcCCH
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-T-------------NLDDAHALHYAVAYCDA 306 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~-------------d~~g~tpLh~A~~~g~~ 306 (585)
..++..++..+++++. +|..|+||||+|+..|+.+++++|+++|+ + +..|.||||+|+..|+.
T Consensus 105 ~~~~~~~~~~~~~~~~---~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNE---CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp HHHHHHHHTTTCCTTC---BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred chhhHHhhhccchhhh---hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 9999999999999999 89999999999999999999999999983 2 34689999999999999
Q ss_pred HHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcC
Q 007923 307 KTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE----PKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEE 382 (585)
Q Consensus 307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~----~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~ 382 (585)
++|++||.+.|+++|.+|..|+||||.++..+. ..++++|+++|+++|.+|.+|+||||+|+..++...+.
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~----- 256 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ----- 256 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH-----
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH-----
Confidence 999999987669999999999999999887654 46899999999999999999999999999987665443
Q ss_pred CCCCcccchHHHHHH-hhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcC----CCCCchhhHHhhhcCCccc
Q 007923 383 GKTTPKDRLCIEILE-QAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLF----PMEAKVIMDIVHLDGTLEF 457 (585)
Q Consensus 383 g~t~~~~~~~~~ll~-~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~----~~~g~t~l~~A~~~~~~~~ 457 (585)
.|++ .+.++|.+|.+|.||||+|+.. ++.+++++|. +-++++|||+|+..++.++
T Consensus 257 -----------~Ll~~~~~~vn~~d~~G~TpL~~A~~~---------g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 257 -----------RLLEQEHIEINDTDSDGKTALLLAVEL---------KLKKIAELLCKRGASTDCGDLVMTARRNYDHSL 316 (337)
T ss_dssp -----------HHHTSTTCCTTCBCTTSCBHHHHHHHT---------TCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHH
T ss_pred -----------HHHHhcCCcccCcCCCCCCHHHHHHHc---------CCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHH
Confidence 2555 4679999999999999999984 4555555553 3457789999999999999
Q ss_pred cccccccccccCcCCc
Q 007923 458 ALDGIKTKKMAGAQRT 473 (585)
Q Consensus 458 ~~~l~~~~~~~~~~~~ 473 (585)
+.+|+. .|++..
T Consensus 317 v~~Ll~----~GA~~d 328 (337)
T 4g8k_A 317 VKVLLS----HGAKED 328 (337)
T ss_dssp HHHHHH----TTCCC-
T ss_pred HHHHHH----CcCCCC
Confidence 999987 676644
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-40 Score=330.02 Aligned_cols=246 Identities=16% Similarity=0.041 Sum_probs=226.7
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccc-cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDK-VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~-~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
.||||.|+..|..+++++|+++|.+++.. +..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+. .++
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI-AGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-HTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH-cCC
Confidence 68999999999999999999999999988 7889999999999999999999999999999999999999999999 799
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-C-------------CCCCchHHHHHHHcCCH
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-T-------------NLDDAHALHYAVAYCDA 306 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~-------------d~~g~tpLh~A~~~g~~ 306 (585)
.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++.|. + +..|.||||+|+..|+.
T Consensus 85 ~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 85 VKLLKLFLSKGADVNE---CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp HHHHHHHHHTTCCTTC---BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCCCc---cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 9999999999999999 89999999999999999999999999983 2 56799999999999999
Q ss_pred HHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcC
Q 007923 307 KTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE----PKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEE 382 (585)
Q Consensus 307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~----~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~ 382 (585)
+++++|++..+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..++...+..
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~---- 237 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR---- 237 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH----
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH----
Confidence 999999998559999999999999999999999 999999999999999999999999999999877655433
Q ss_pred CCCCcccchHHHHHH-hhhhcCCcccCCCCHHHHHHhhhhhHHHHH
Q 007923 383 GKTTPKDRLCIEILE-QAERRDPLLREASHSFAMAGDDLRMKLLYL 427 (585)
Q Consensus 383 g~t~~~~~~~~~ll~-~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l 427 (585)
|++ .+.+++.+|..|.||||+|+..++.+++.+
T Consensus 238 ------------Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~ 271 (285)
T 1wdy_A 238 ------------LLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271 (285)
T ss_dssp ------------HHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ------------HHhccCCCccccCCCCCcHHHHHHHcCcHHHHHH
Confidence 677 788999999999999999998444444433
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=327.50 Aligned_cols=202 Identities=13% Similarity=0.031 Sum_probs=192.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+. .++.
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~ 82 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV-SGSW 82 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-HTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCCH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923 242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL 317 (585)
Q Consensus 242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ 317 (585)
+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|. .|..|.||||+|+..|+.+++++|++.|
T Consensus 83 ~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g- 157 (261)
T 2xai_A 83 DCVNLLLQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG- 157 (261)
T ss_dssp HHHHHHHHTTCCSSC----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT-
T ss_pred HHHHHHHHCCCCCCC----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC-
Confidence 999999999999987 5679999999999999999999999993 5678999999999999999999999998
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923 318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL 370 (585)
Q Consensus 318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 370 (585)
+++|. +..|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+..
T Consensus 158 ~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 158 ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 99995 88999999999999999999999999999999999999999999854
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-39 Score=322.27 Aligned_cols=263 Identities=17% Similarity=0.129 Sum_probs=236.6
Q ss_pred ccCChHHHHHHHHhhHHHHHHHHhcCCCcccc-CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHH
Q 007923 192 VADDILVVLSVAHMCGKACEKLLERCIEITVK-SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHR 270 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~-d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~ 270 (585)
.+|+++++.|+..++.+++++|+++|++++.+ +..|.||||+|+. .++.+++++|+++|++++. ++..|.||||+
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~ 78 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHGADPVL---RKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTCCCHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCcc---cCCCCCCHHHH
Confidence 35789999999999999999999999999998 7889999999999 7999999999999999999 89999999999
Q ss_pred HHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccC----------CCCCChHHHHHHH
Q 007923 271 ALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHR----------NSRGYTVLHVAAM 336 (585)
Q Consensus 271 A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~----------d~~G~TpLh~Aa~ 336 (585)
|+..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.+ ++++.. +..|.||||+|+.
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhC-CCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 999999999999999993 5688999999999999999999999998 999988 7889999999999
Q ss_pred cCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHH
Q 007923 337 RKEPKIIVSLLTK-GARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAM 415 (585)
Q Consensus 337 ~g~~~iv~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~ 415 (585)
.|+.+++++|+++ |++++.+|..|+||||+|+..++...+. .....+++.+.+++.++..|.||||+
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~------------~i~~~Ll~~g~~~~~~~~~g~t~L~~ 225 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE------------AITHLLLDHGADVNVRGERGKTPLIL 225 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHH------------HHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHH------------HHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 9999999999997 9999999999999999999987643221 12234678899999999999999999
Q ss_pred HHhhhhhHHHHHHhh-hhhhhhcCCCCCchhhHHhhhcCCccccccccccccccCcCCccc
Q 007923 416 AGDDLRMKLLYLENR-VGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTV 475 (585)
Q Consensus 416 A~~~~~~~~l~l~~~-~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~~~ 475 (585)
|+..++..++.+.-. .++.....+..|+||||+|...++.+++.++.. .|++....
T Consensus 226 A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~----~Ga~~~~~ 282 (285)
T 1wdy_A 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK----RGASTDCG 282 (285)
T ss_dssp HHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----HSSCSCCS
T ss_pred HHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHH----cCCCCCcc
Confidence 999888888876655 677777889999999999999999999999987 66665543
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=329.82 Aligned_cols=236 Identities=12% Similarity=0.071 Sum_probs=198.5
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhc-----------cccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChh
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHL-----------LDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIV 229 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g-----------~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t 229 (585)
..|+||+|+..|..+.+..++..+ -.++..+..|.||+++|+..++.+++++|+++|++++.+|..|.|
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t 94 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVS 94 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 478999999999976555543321 235678889999999999999999999999999999999999999
Q ss_pred HHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC---CCCCCchHHHHHHHcCCH
Q 007923 230 TLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH---TNLDDAHALHYAVAYCDA 306 (585)
Q Consensus 230 ~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~---~d~~g~tpLh~A~~~g~~ 306 (585)
|||+|+. .++.+++++|+++|++++. +|..|+||||+|+..|+.+++++|++.|. .+..|.||||+|+..|+.
T Consensus 95 ~L~~A~~-~g~~~~v~~Ll~~ga~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 95 PLHEACL-GGHLSCVKILLKHGAQVNG---VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHV 170 (285)
T ss_dssp HHHHHHH-TTCHHHHHHHHHTTCCSSC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCH
T ss_pred HHHHHHH-CCcHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 9999999 7999999999999999999 89999999999999999999999999993 456799999999999999
Q ss_pred HHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCC
Q 007923 307 KTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTT 386 (585)
Q Consensus 307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~ 386 (585)
+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++. |..|+||||+|+..++...+..
T Consensus 171 ~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~-------- 240 (285)
T 3d9h_A 171 ECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACL-------- 240 (285)
T ss_dssp HHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHH--------
T ss_pred HHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHH--------
Confidence 9999999998 99999999999999999999999999999999999995 8899999999999887665543
Q ss_pred cccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923 387 PKDRLCIEILEQAERRDPLLREASHSFAMAGD 418 (585)
Q Consensus 387 ~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~ 418 (585)
|++.+++++.+|.+|.||||+|+.
T Consensus 241 --------Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 241 --------LMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp --------HHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred --------HHHCCCCCCCcCCCCCCHHHHhcC
Confidence 788999999999999999999995
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=320.96 Aligned_cols=243 Identities=13% Similarity=0.076 Sum_probs=213.8
Q ss_pred cCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 193 ADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 193 ~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
+|+||+++|+..++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|+++|++++. +|..|+||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~ 77 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACL-GGHLSCVKILLKHGAQVNG---VTADWHTPLFNAC 77 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999 7999999999999999999 8999999999999
Q ss_pred hCCCHHHHHHHHhCCC---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 007923 273 DSDDVELVRMLLKEAH---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTK 349 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ 349 (585)
..|+.+++++|+++|+ .+.+|.||||+|+..|+.++++.|++.| +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999993 4567999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHh
Q 007923 350 GARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLEN 429 (585)
Q Consensus 350 gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~ 429 (585)
|++++. +..|+||||+|+..++...+.. |++.+++++.+|.+|.||||+|+....+.-+.+..
T Consensus 157 g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~----------------Ll~~gad~~~~d~~g~tpl~~A~~~~~~~~~ll~~ 219 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHAVARTASEELACL----------------LMDFGADTQAKNAEGKRPVELVPPESPLAQLFLER 219 (261)
T ss_dssp TCCTTC-CBTTBCHHHHHHHHTCHHHHHH----------------HHHTTCCTTCCCTTSCCGGGGSCTTCTHHHHHHHC
T ss_pred CCCCCC-CCCCCChHHHHHHcCCHHHHHH----------------HHHcCCCCCCcCCCCCChhhhccccccHHHHHHhc
Confidence 999995 8899999999999887665543 78999999999999999999999766543332221
Q ss_pred hh------hhhhhcCCCCCchhhHHhhhcCCccc
Q 007923 430 RV------GLAKLLFPMEAKVIMDIVHLDGTLEF 457 (585)
Q Consensus 430 ~~------~~~~~L~~~~g~t~l~~A~~~~~~~~ 457 (585)
.. .+...+++..|+||+|+|.....++.
T Consensus 220 ~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~ 253 (261)
T 2xai_A 220 EGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPED 253 (261)
T ss_dssp -CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHH
T ss_pred cCCccHHHHHHHHHHHHhchhccccCcccCCcHH
Confidence 11 12334578899999999976554433
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.2e-38 Score=326.62 Aligned_cols=269 Identities=14% Similarity=0.088 Sum_probs=228.8
Q ss_pred hhhhHHHHHHhcChhHHHHHHHh-hccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccC
Q 007923 160 FMVEVLYVSFAFQVPELVALYQR-HLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQH 238 (585)
Q Consensus 160 f~~t~L~~A~~~~~~elv~~ll~-~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~ 238 (585)
+..|+||.|+..|..+.++.++. .+.+++..+..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+. .
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~ 101 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACS-Y 101 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-T
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH-C
Confidence 44889999999999998887775 489999999999999999999999999999999999999999999999999999 7
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHH---------------
Q 007923 239 IVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHY--------------- 299 (585)
Q Consensus 239 ~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~--------------- 299 (585)
++.+++++|+++|++++. .|..|+||||+|+..|+.+++++|+++|. .+..|.||+|+
T Consensus 102 g~~~iv~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNA---MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp TCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 999999999999999999 89999999999999999999999999983 56677777665
Q ss_pred ------HHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923 300 ------AVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMR---KEPKIIVSLLTKGARPSDLTLDGRKALQISKRL 370 (585)
Q Consensus 300 ------A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 370 (585)
++..++.+.+..++... ......+..|+||||+|+.. +..+++++|+++|++++.+|.+|+||||+|+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 257 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALE-IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAER 257 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTC-CTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ccHHHHHHHhccHHHHHHHHHhh-cccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHc
Confidence 45566777777777766 44445677888888888888 447888888888888888888888888888887
Q ss_pred CCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHh
Q 007923 371 TKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIV 449 (585)
Q Consensus 371 ~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A 449 (585)
++...+.. |++.++++|.+|..|.||||+|+..++.+++.++-..+......+..|+||+++|
T Consensus 258 g~~~~v~~----------------Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 258 AHNDVMEV----------------LHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp TCHHHHHH----------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred CCHHHHHH----------------HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 76654433 6778888888888888888888888888887777777777777888888888888
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4e-39 Score=318.11 Aligned_cols=216 Identities=15% Similarity=0.115 Sum_probs=152.1
Q ss_pred ccccccccCChHHHHHHHHh-------------hHHHHHHHHhcCCCccc-cCCCChhHHhhhcccCCHHHHHHHHHHcC
Q 007923 186 DILDKVVADDILVVLSVAHM-------------CGKACEKLLERCIEITV-KSDIDIVTLDKTLPQHIVKQIIDLRVELS 251 (585)
Q Consensus 186 ~~~~~~~~~~t~l~l~~a~~-------------~~~~~~~Ll~~g~din~-~d~~g~t~L~~A~~~~~~~~i~~~Ll~~g 251 (585)
|+|.++.+|.|||++|+..| +.+++++|+++|++++. .|..|+||||+|+. .++.+++++|+++|
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g 80 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR-YSRSDAAKRLLEAS 80 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHH-TTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcC
Confidence 56777788888888877765 78888888888888865 47888999999988 78888999999999
Q ss_pred CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCC
Q 007923 252 LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSR 326 (585)
Q Consensus 252 a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~ 326 (585)
++++. +|..|+||||+|+..|+.+++++|++.+. .|..|.||||+|+..|+.+++++|++.| +++|.+|..
T Consensus 81 ~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~ 156 (253)
T 1yyh_A 81 ADANI---QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDL 156 (253)
T ss_dssp CCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTT
T ss_pred CCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCC
Confidence 88888 78888999999999999999999988873 4567889999999988888999988887 889988888
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcc
Q 007923 327 GYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLL 406 (585)
Q Consensus 327 G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~ 406 (585)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+.. |++.+++++.+|
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~----------------Ll~~ga~~~~~d 220 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV----------------LLDHFANRDITD 220 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH----------------HHHTTCCTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHH----------------HHHcCCCccccc
Confidence 9999999999999999999999999998888889999999988876655543 788888888888
Q ss_pred cCCCCHHHHHHhhhhh
Q 007923 407 REASHSFAMAGDDLRM 422 (585)
Q Consensus 407 ~~g~t~Lh~A~~~~~~ 422 (585)
..|.||||+|++.++.
T Consensus 221 ~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 221 HMDRLPRDIAQERMHH 236 (253)
T ss_dssp TTCCCHHHHHHHTTCH
T ss_pred cCCCCHHHHHHHcCCH
Confidence 8899999998873333
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-37 Score=301.83 Aligned_cols=217 Identities=15% Similarity=0.148 Sum_probs=168.3
Q ss_pred cccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCC
Q 007923 185 LDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKH 264 (585)
Q Consensus 185 ~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g 264 (585)
.+++.++..|.||+++|+..++.+++++|+++|++++..+..|.||||+|+. .++.+++++|+++|++++. ++..|
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g 77 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAE-NNHLEAVKYLIKAGALVDP---KDAEG 77 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTTTCCCCC---CCTTS
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHH-hCCHHHHHHHHhCCCCCCC---CCCCC
Confidence 3566777778888888888888888888888888888888888888888887 6778888888888888777 77778
Q ss_pred ChHHHHHHhCCCHHHHHHHHhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC
Q 007923 265 TKRIHRALDSDDVELVRMLLKEAH-----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE 339 (585)
Q Consensus 265 ~t~Lh~A~~~g~~~~v~~Ll~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~ 339 (585)
.||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCC
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCC
Confidence 888888888888888888887762 4466778888888888888888888776 7888888888888888888888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhh
Q 007923 340 PKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDD 419 (585)
Q Consensus 340 ~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~ 419 (585)
.+++++|+++|++++.+|..|+||||+|++.++...+.. |++.+++++.+|.+|.||||+|+..
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------Ll~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL----------------FLSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH----------------HHTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHH----------------HHHcCCCCCccCCCCCCHHHHHHHH
Confidence 888888888888888888888888888887665544432 6677777777888888888888775
Q ss_pred hhh
Q 007923 420 LRM 422 (585)
Q Consensus 420 ~~~ 422 (585)
++.
T Consensus 221 ~~~ 223 (237)
T 3b7b_A 221 SQV 223 (237)
T ss_dssp CHH
T ss_pred HHH
Confidence 554
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.6e-37 Score=318.60 Aligned_cols=265 Identities=17% Similarity=0.122 Sum_probs=220.7
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
..||||+|+..|..+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+. .++
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~ 136 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS-KNR 136 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-TTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHH---------------------HhCCCHHHHHHHHhCCC----CCCCCch
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRA---------------------LDSDDVELVRMLLKEAH----TNLDDAH 295 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A---------------------~~~g~~~~v~~Ll~~g~----~d~~g~t 295 (585)
.+++++|+++|++++. .+..|.||+++| +..++.+.++.++..+. .+..|.|
T Consensus 137 ~~~v~~Ll~~g~~~~~---~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t 213 (351)
T 3utm_A 137 VEVCSLLLSHGADPTL---VNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213 (351)
T ss_dssp HHHHHHHHHTTCCTTC---CCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCC
T ss_pred HHHHHHHHHcCCCCcc---ccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999999 899999997764 56677777887777663 4578999
Q ss_pred HHHHHHHc---CCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 007923 296 ALHYAVAY---CDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTK 372 (585)
Q Consensus 296 pLh~A~~~---g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~ 372 (585)
|||+|+.. ++.+++++|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~ 292 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999 5589999999988 9999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhc
Q 007923 373 AADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLD 452 (585)
Q Consensus 373 ~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~ 452 (585)
...+.. |++.|++++..|..|.||+|+|... +.++.... ......++.+++..|+..
T Consensus 293 ~~~v~~----------------Ll~~gad~~~~~~~g~tal~~a~~~----~~~~l~~~---~~~~~~~~~~~l~~A~~~ 349 (351)
T 3utm_A 293 LQTCRL----------------LLSYGSDPSIISLQGFTAAQMGNEA----VQQILSES---TPMRTSDVDYRLLEASKA 349 (351)
T ss_dssp HHHHHH----------------HHHTTCCTTCCCTTSCCHHHHSCHH----HHHHHHHC---------------------
T ss_pred HHHHHH----------------HHHcCCCCCCcCCCCCChhhhhhHH----HHHHHHhc---cccccCcceeehhhhhcc
Confidence 765544 8899999999999999999999641 11111110 011334566777777654
Q ss_pred C
Q 007923 453 G 453 (585)
Q Consensus 453 ~ 453 (585)
|
T Consensus 350 g 350 (351)
T 3utm_A 350 G 350 (351)
T ss_dssp -
T ss_pred C
Confidence 4
No 13
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4e-38 Score=327.81 Aligned_cols=255 Identities=12% Similarity=0.018 Sum_probs=219.8
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
..||||+|+..|..+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++. ..|.||||+|+. .++
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~-~g~ 96 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVM-ANK 96 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHH-TTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHH-cCC
Confidence 48999999999999999999999999999999999999999999999999999999997655 469999999999 799
Q ss_pred HHHHHHHHHc----CCCCCCC--------------CCCCCCCChHHHHHHhCC--CHHHHHHHHhCCC----CCCCCchH
Q 007923 241 KQIIDLRVEL----SLHRSES--------------CGFPDKHTKRIHRALDSD--DVELVRMLLKEAH----TNLDDAHA 296 (585)
Q Consensus 241 ~~i~~~Ll~~----ga~in~~--------------~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~----~d~~g~tp 296 (585)
.+++++|++. |++++.. ..++..|.||||+|+..| +.++|++|+++|+ .|..|+||
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 176 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETP 176 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCH
Confidence 9999999999 7765530 004678999999999999 9999999999993 66889999
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCC-----cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 297 LHYAVAYCDAKTTTELLDLGLAD-----VNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 297 Lh~A~~~g~~~~v~~LL~~~~ad-----vn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
||+|+..|+.+++++||+.+ ++ +|.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|+..+
T Consensus 177 L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 177 LMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 99999999999999999988 88 9999999999999999999999999999999999999999999999999998
Q ss_pred CCCcccccCcCCCCCcccchHHHHHHhhhhcC------------CcccCCCCHHHHHHhhhhhHHHHHHhhhhhhh
Q 007923 372 KAADYYIPTEEGKTTPKDRLCIEILEQAERRD------------PLLREASHSFAMAGDDLRMKLLYLENRVGLAK 435 (585)
Q Consensus 372 ~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n------------~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~ 435 (585)
+...+.. |++.+++.+ ..+..++||++.|+..++...+...-...+..
T Consensus 256 ~~~~v~~----------------Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 256 MVLLTKE----------------LLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp CHHHHHH----------------HHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH----------------HHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHH
Confidence 7766654 566654332 24567888998888866554443333333333
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.8e-37 Score=310.10 Aligned_cols=205 Identities=18% Similarity=0.077 Sum_probs=181.6
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccc---cccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccC
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLD---ILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQH 238 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~---~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~ 238 (585)
.||||+|+..|..+++++|+++|.+ ++.++..|.||+++|+..++.+++++|+++|++++.+|..|+||||+|+. .
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~-~ 88 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR-V 88 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT-T
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-c
Confidence 7899999999999999999999998 88899999999999999999999999999999999999999999999999 7
Q ss_pred CHHHHHHHHHHcCCC-----------------------------------------------CCCCCCCCCCCChHHHHH
Q 007923 239 IVKQIIDLRVELSLH-----------------------------------------------RSESCGFPDKHTKRIHRA 271 (585)
Q Consensus 239 ~~~~i~~~Ll~~ga~-----------------------------------------------in~~~~~d~~g~t~Lh~A 271 (585)
++.+++++|+++|++ ++. ++..|.||||+|
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~t~L~~A 165 (282)
T 1oy3_D 89 RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA---ENYDGHTPLHVA 165 (282)
T ss_dssp TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC---CCTTSCCHHHHH
T ss_pred CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC---cCCCCcCHHHHH
Confidence 999999999998865 556 788999999999
Q ss_pred HhCCCHHHHHHHHhCCC----CC-CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923 272 LDSDDVELVRMLLKEAH----TN-LDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL 346 (585)
Q Consensus 272 ~~~g~~~~v~~Ll~~g~----~d-~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 346 (585)
+..|+.++|++|+++|+ .+ ..|+||||+|+..|+.+++++||+.| +++|.+|..|+||||+|+.+|+.+++++|
T Consensus 166 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~L 244 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILARLL 244 (282)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHHHH
Confidence 99999999999999993 33 34999999999999999999999997 99999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 347 LTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 347 l~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
+++||+++.+|..|.|||++|....
T Consensus 245 l~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 245 RAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHTTCCCCCCC--------------
T ss_pred HHcCCCcCcCCCcccccccccCCcc
Confidence 9999999999999999999998753
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.9e-38 Score=310.32 Aligned_cols=213 Identities=15% Similarity=0.113 Sum_probs=175.2
Q ss_pred hhhHHHHHHhcC-------------hhHHHHHHHhhccccccc-cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCC
Q 007923 161 MVEVLYVSFAFQ-------------VPELVALYQRHLLDILDK-VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDI 226 (585)
Q Consensus 161 ~~t~L~~A~~~~-------------~~elv~~ll~~g~~~~~~-~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~ 226 (585)
..||||+|+..| ..+++++|+++|.+++.. +..|.||+++|+..++.+++++|+++|++++.+|..
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 89 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM 89 (253)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 379999999987 889999999999999764 889999999999999999999999999999999999
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCC-CCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSL-HRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAV 301 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga-~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~ 301 (585)
|+||||+|+. .++.+++++|+++|+ +++. ++..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+
T Consensus 90 g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 90 GRTPLHAAVS-ADAQGVFQILIRNRATDLDA---RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAA 165 (253)
T ss_dssp SCCHHHHHHH-HTCHHHHHHHHHSTTSCTTC---CCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCHHHHHHH-cCCHHHHHHHHHcCCCCccc---cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 9999999999 799999999999998 8888 89999999999999999999999999983 5688999999999
Q ss_pred HcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 302 AYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 302 ~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+...+..
T Consensus 166 ~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 166 AVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241 (253)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999988765543
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.4e-39 Score=334.80 Aligned_cols=245 Identities=12% Similarity=0.130 Sum_probs=214.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhcccccccc-ccCChHHHHHHHHhhHHHHHHHH--------hcCCCccccCCCChhHHh
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKV-VADDILVVLSVAHMCGKACEKLL--------ERCIEITVKSDIDIVTLD 232 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~-~~~~t~l~l~~a~~~~~~~~~Ll--------~~g~din~~d~~g~t~L~ 232 (585)
.||||+|+..+. +++++|+. .+++..+ ..|.|||++|+..++.+++++|+ ++|+++|.+|..|.||||
T Consensus 95 ~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~ 171 (373)
T 2fo1_E 95 PIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 171 (373)
T ss_dssp CCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred ccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHH
Confidence 789999999654 67777765 4677777 78999999999988776666554 889999999999999999
Q ss_pred hhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC----C---CCCCCchHHHHHHHcC-
Q 007923 233 KTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA----H---TNLDDAHALHYAVAYC- 304 (585)
Q Consensus 233 ~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g----~---~d~~g~tpLh~A~~~g- 304 (585)
+|+. .++.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++++ + .|..|+||||+|+..+
T Consensus 172 ~A~~-~g~~~iv~~Ll~~ga~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 247 (373)
T 2fo1_E 172 LAVL-ARRRRLVAYLMKAGADPTI---YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG 247 (373)
T ss_dssp HHHH-HTCHHHHHHHHHTTCCSCC---CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCS
T ss_pred HHHH-cChHHHHHHHHHCCCCCcc---cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCC
Confidence 9999 7999999999999999999 8999999999999999999999999876 2 5788999999999998
Q ss_pred --CHHHHHHHHhhCCCCccc--------CCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCC
Q 007923 305 --DAKTTTELLDLGLADVNH--------RNSRGYTVLHVAAMRKEPKIIVSLLTKG-ARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 305 --~~~~v~~LL~~~~advn~--------~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
+.+++++|++.| ++++. +|..|+||||+|+..|+.++|++|+++| ++++.+|.+|+||||+|+..|+.
T Consensus 248 ~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~ 326 (373)
T 2fo1_E 248 RDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 326 (373)
T ss_dssp TTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH
Confidence 899999999998 99886 6779999999999999999999999876 99999999999999999998877
Q ss_pred CcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCC
Q 007923 374 ADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFP 439 (585)
Q Consensus 374 ~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~ 439 (585)
..+.. |++.+++++.+|..|.||||+|+. .++.+++++|..
T Consensus 327 ~iv~~----------------Ll~~gad~~~~d~~g~t~l~~A~~---------~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 327 EVVMY----------------LIQQGASVEAVDATDHTARQLAQA---------NNHHNIVDIFDR 367 (373)
T ss_dssp HHHHH----------------HHHTTCCSSCCCSSSCCHHHHHHH---------TTCHHHHHHHHT
T ss_pred HHHHH----------------HHHcCCCccCCCCCCCCHHHHHHH---------cCCHHHHHHHHh
Confidence 65544 788999999999999999999998 455555555543
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-37 Score=311.95 Aligned_cols=211 Identities=19% Similarity=0.143 Sum_probs=185.9
Q ss_pred cccccccCChHHHHHHHHhhHHHHHHHHhcCCC---ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCC
Q 007923 187 ILDKVVADDILVVLSVAHMCGKACEKLLERCIE---ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDK 263 (585)
Q Consensus 187 ~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~d---in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~ 263 (585)
++.++..|.|||++|+..++.+++++|+++|++ ++.++..|+||||+|+. .++.+++++|+++|++++. ++..
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~---~~~~ 77 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI-LGEASTVEKLYAAGAGVLV---AERG 77 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCSSC---CCTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC---CCCC
Confidence 456889999999999999999999999999998 89999999999999999 7999999999999999999 8999
Q ss_pred CChHHHHHHhCCCHHHHHHHHhCCC---------------------------------------------------CCCC
Q 007923 264 HTKRIHRALDSDDVELVRMLLKEAH---------------------------------------------------TNLD 292 (585)
Q Consensus 264 g~t~Lh~A~~~g~~~~v~~Ll~~g~---------------------------------------------------~d~~ 292 (585)
|+||||+|+..|+.+++++|+++|. .|..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 9999999999999999999998762 3467
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCC-CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 293 DAHALHYAVAYCDAKTTTELLDLGLADVNHRNSR-GYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 293 g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~-G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
|+||||+|+..|+.+++++|++.| +++|.++.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..+
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 999999999999999999999998 999999864 999999999999999999999999999999999999999999987
Q ss_pred CCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923 372 KAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGD 418 (585)
Q Consensus 372 ~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~ 418 (585)
+...+.. |++.|++++.++..|.|||++|..
T Consensus 237 ~~~~v~~----------------Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 237 NPILARL----------------LRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHH----------------HHHTTCCCCCCC------------
T ss_pred CcHHHHH----------------HHHcCCCcCcCCCcccccccccCC
Confidence 7665543 789999999999999999999986
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=313.97 Aligned_cols=205 Identities=20% Similarity=0.175 Sum_probs=167.9
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccc--------cccccccCChHHHHHHHHhhH-HHHHHHHhcCCCccccCCCChhHHh
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLD--------ILDKVVADDILVVLSVAHMCG-KACEKLLERCIEITVKSDIDIVTLD 232 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~--------~~~~~~~~~t~l~l~~a~~~~-~~~~~Ll~~g~din~~d~~g~t~L~ 232 (585)
.++|+.|+..|..++|++|++.|.+ ++..+..+.||+++++..+.. .++++|+++|+++|.+|..|+||||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 6899999999999999999998875 456677788988888877654 5889999999999999999999999
Q ss_pred hhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHH
Q 007923 233 KTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKT 308 (585)
Q Consensus 233 ~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~ 308 (585)
+|+. .++.+++++|++.|++++. ++..|.||+|+|+..++.+++++|++.|. .|..|+||||+|+..|+.++
T Consensus 92 ~A~~-~g~~~~v~~Ll~~~a~~~~---~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 92 VAAL-HGRADLIPLLLKHGANAGA---RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp HHHH-TTCTTHHHHHHHTTCCTTC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGG
T ss_pred HHHH-cCcHHHHHHHHhcCCCcCc---cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 9999 7999999999999999999 89999999999999999999999999993 67889999999999999999
Q ss_pred HHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 309 TTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 309 v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
|++||+.| +|+|.+|..|+||||+|+..|+.++|++||++|||++.+|.+|+||||+|++++
T Consensus 168 v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 168 VALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 99999998 999999999999999999999999999999999999999999999999998654
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.5e-37 Score=300.37 Aligned_cols=207 Identities=14% Similarity=0.112 Sum_probs=199.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+. .++.
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~ 90 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAK-KGHY 90 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHH-TTCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-cCCH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred HHHHHHHHcC-CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923 242 QIIDLRVELS-LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLG 316 (585)
Q Consensus 242 ~i~~~Ll~~g-a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~ 316 (585)
+++++|++.| ++++. .+..|.||||+|+..|+.+++++|++.|. .|..|.||||+|+..|+.+++++|++.|
T Consensus 91 ~~~~~Ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 91 EVVQYLLSNGQMDVNC---QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp HHHHHHHTTTCCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred HHHHHHHhCCCCCccc---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999 89998 89999999999999999999999999993 5678999999999999999999999998
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923 317 LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 317 ~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++.
T Consensus 168 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 168 -CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp -CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHH
T ss_pred -CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986543
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.2e-37 Score=302.24 Aligned_cols=209 Identities=18% Similarity=0.169 Sum_probs=125.7
Q ss_pred cccccCChHHHHHHHHhhHHHHHHHHh----cCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCC
Q 007923 189 DKVVADDILVVLSVAHMCGKACEKLLE----RCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKH 264 (585)
Q Consensus 189 ~~~~~~~t~l~l~~a~~~~~~~~~Ll~----~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g 264 (585)
.+|.+|.||+++|+..++.+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++++. ++..|
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g 79 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI-TTLPSVVRLLVTAGASPMA---LDRHG 79 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTS
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHH-cCCHHHHHHHHHcCCCccc---cCCCC
Confidence 445556666666666666666666554 466666666666666666666 5666666666666666665 56666
Q ss_pred ChHHHHHHhCCCHHHHHHHHhCCC--------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCC-CCCChHHHHHH
Q 007923 265 TKRIHRALDSDDVELVRMLLKEAH--------TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRN-SRGYTVLHVAA 335 (585)
Q Consensus 265 ~t~Lh~A~~~g~~~~v~~Ll~~g~--------~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~Aa 335 (585)
.||||+|+..|+.+++++|++.+. .|..|+||||+|+..|+.+++++|++.| ++++..+ ..|+||||+|+
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHHH
Confidence 666666666666666666665542 2345566666666666666666666655 6666665 55666666666
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHH
Q 007923 336 MRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAM 415 (585)
Q Consensus 336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~ 415 (585)
..|+.+++++|+++|++++.+|..|+||||+|+..++...+.. |++.+++++.+|..|.||||+
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRT----------------LVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHH----------------HHHTTCCTTCCCTTSCCTTTT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH----------------HHhcCCCCCCcCCCCCCHHHH
Confidence 6666666666666666666666666666666666554443322 555666666666666666666
Q ss_pred HHh
Q 007923 416 AGD 418 (585)
Q Consensus 416 A~~ 418 (585)
|+.
T Consensus 223 A~~ 225 (241)
T 1k1a_A 223 ARS 225 (241)
T ss_dssp CSS
T ss_pred HHh
Confidence 665
No 21
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-36 Score=312.87 Aligned_cols=262 Identities=18% Similarity=0.134 Sum_probs=230.0
Q ss_pred cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCC-ChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHH
Q 007923 191 VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDI-DIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIH 269 (585)
Q Consensus 191 ~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~-g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh 269 (585)
+..|+|+|+.|+..++.++|++||++|+|+|.++.. |+||||+|+. .++.+++++|+++|++++. ++..+.+|++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~-~g~~~iv~~Ll~~ga~~~~---~~~~~~~~~~ 97 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHGADPVL---RKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTCCCHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHH-cCCHHHHHHHHHcCCchhh---hccCCCchhH
Confidence 345789999999999999999999999999998764 9999999999 7999999999999999999 8999999999
Q ss_pred HHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccC----------CCCCChHHHHHH
Q 007923 270 RALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHR----------NSRGYTVLHVAA 335 (585)
Q Consensus 270 ~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~----------d~~G~TpLh~Aa 335 (585)
.++..+...++..++..+. .|..|+||||+|+..|+.+++++|+..| ++++.. +..|.||||+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~g-a~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcC-CCcchhhccccccccccCCCCcHHHHHH
Confidence 9999999999999999883 6788999999999999999999999998 888764 456899999999
Q ss_pred HcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHH
Q 007923 336 MRKEPKIIVSLLT-KGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFA 414 (585)
Q Consensus 336 ~~g~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh 414 (585)
..|+.++|++||+ .|++++.+|..|+||||.++..++...+.. ....|++.++++|.+|..|.||||
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~------------i~~lLl~~gad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA------------ITHLLLDHGADVNVRGERGKTPLI 244 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHH------------HHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred HCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHH------------HHHHHHHCCCCCCCcCCCCCCHHH
Confidence 9999999999996 699999999999999999988655443321 122367899999999999999999
Q ss_pred HHHhhhhhHHHHHHh-hhhhhhhcCCCCCchhhHHhhhcCCccccccccccccccCcCCc
Q 007923 415 MAGDDLRMKLLYLEN-RVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRT 473 (585)
Q Consensus 415 ~A~~~~~~~~l~l~~-~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~~~~ 473 (585)
+|+..++..++.+.- ..++.....+.+|+||||+|+..|+.+++.+|+. .|++..
T Consensus 245 ~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~----~GAd~n 300 (337)
T 4g8k_A 245 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK----RGASTD 300 (337)
T ss_dssp HHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT----TSCSST
T ss_pred HHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCC
Confidence 999988887765543 3456666789999999999999999999999987 666544
No 22
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.7e-38 Score=326.67 Aligned_cols=222 Identities=13% Similarity=0.062 Sum_probs=198.0
Q ss_pred ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCC
Q 007923 184 LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDK 263 (585)
Q Consensus 184 g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~ 263 (585)
+++++..+..|.|+|++|+..++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++. ..
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~-----~~ 83 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACK-FGCVDTAKYLASVGEVHSL-----WH 83 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-HCCHHHHHHHHHHCCCCCC-----BT
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHH-cCCHHHHHHHHHCCCCccc-----cC
Confidence 46777889999999999999999999999999999999999999999999999 7999999999999996644 47
Q ss_pred CChHHHHHHhCCCHHHHHHHHhC----CC---------------------CCCCCchHHHHHHHcC--CHHHHHHHHhhC
Q 007923 264 HTKRIHRALDSDDVELVRMLLKE----AH---------------------TNLDDAHALHYAVAYC--DAKTTTELLDLG 316 (585)
Q Consensus 264 g~t~Lh~A~~~g~~~~v~~Ll~~----g~---------------------~d~~g~tpLh~A~~~g--~~~~v~~LL~~~ 316 (585)
|+||||+|+..|+.++|++|++. |. .|..|.||||+|+..| +.++|++||+.|
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 99999999999999999999998 42 3457999999999999 999999999997
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccch
Q 007923 317 LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR-----PSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRL 391 (585)
Q Consensus 317 ~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad-----~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~ 391 (585)
+++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++...+..
T Consensus 164 -a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~------------- 229 (364)
T 3ljn_A 164 -ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMR------------- 229 (364)
T ss_dssp -CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHH-------------
T ss_pred -CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHH-------------
Confidence 99999999999999999999999999999999999 99999999999999999887765544
Q ss_pred HHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHH
Q 007923 392 CIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLE 428 (585)
Q Consensus 392 ~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~ 428 (585)
|++.+++++.+|..|.||||+|+..++.+++.++
T Consensus 230 ---Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~L 263 (364)
T 3ljn_A 230 ---FVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKEL 263 (364)
T ss_dssp ---HHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHH
T ss_pred ---HHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHH
Confidence 7889999999999999999999985555554443
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.1e-37 Score=302.35 Aligned_cols=213 Identities=15% Similarity=0.043 Sum_probs=199.9
Q ss_pred hhhHHHHHHhcChhHHHHHHHh----hccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcc
Q 007923 161 MVEVLYVSFAFQVPELVALYQR----HLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLP 236 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~----~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~ 236 (585)
..||||+|+..|..+++++|++ .|.+++.++..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 3789999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHcCC----CCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CC-CCCchHHHHHHHcCCHH
Q 007923 237 QHIVKQIIDLRVELSL----HRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TN-LDDAHALHYAVAYCDAK 307 (585)
Q Consensus 237 ~~~~~~i~~~Ll~~ga----~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d-~~g~tpLh~A~~~g~~~ 307 (585)
.++.+++++|++.|+ +++. .+..|.||||+|+..|+.+++++|++.|. .+ ..|.||||+|+..|+.+
T Consensus 89 -~~~~~~~~~Ll~~~~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (241)
T 1k1a_A 89 -HRSPTCLRALLDSAAPGTLDLEA---RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS 164 (241)
T ss_dssp -TTCHHHHHHHHHHSCTTSCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred -cCCHHHHHHHHHcCCCccccccc---cCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHH
Confidence 799999999999998 8888 89999999999999999999999999993 34 67999999999999999
Q ss_pred HHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 308 TTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 308 ~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..
T Consensus 165 ~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~ 234 (241)
T 1k1a_A 165 MVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG 234 (241)
T ss_dssp HHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC
T ss_pred HHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhh
Confidence 999999997 9999999999999999999999999999999999999999999999999998765554443
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1e-36 Score=295.81 Aligned_cols=207 Identities=18% Similarity=0.080 Sum_probs=195.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhcc-ccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLL-DILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~-~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
.+|||.|+..|..+.++.+++.+. .++..+..|.||+++|+..++.+++++|+++|++++.+|..|+||||+|+. .++
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~ 85 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS-AGX 85 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH-HTC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH-cCH
Confidence 478999999999999999987764 467788999999999999999999999999999999999999999999999 799
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhC
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLG 316 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~ 316 (585)
.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++.|. .|..|.||||+|+..|+.+++++|++.+
T Consensus 86 ~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 162 (231)
T 3aji_A 86 DEIVKALLVKGAHVNA---VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK 162 (231)
T ss_dssp HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999 89999999999999999999999999983 5678999999999999999999999987
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923 317 LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 317 ~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++.
T Consensus 163 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 218 (231)
T 3aji_A 163 -ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGL 218 (231)
T ss_dssp -CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHH
T ss_pred -CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999875443
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=307.28 Aligned_cols=212 Identities=19% Similarity=0.116 Sum_probs=167.9
Q ss_pred cccccCChHHHHHHHHhhHHHHHHHHhcCCC--------ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCC
Q 007923 189 DKVVADDILVVLSVAHMCGKACEKLLERCIE--------ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGF 260 (585)
Q Consensus 189 ~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~d--------in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~ 260 (585)
.+|..+.++|+.|+..|+.++|++|+++|++ ++..+..|.||||.|+.......++++|++.|+++|. +
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~---~ 82 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV---T 82 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTC---C
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC---c
Confidence 4566677899999999999999999999875 5677888999999999854556689999999999999 8
Q ss_pred CCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH
Q 007923 261 PDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM 336 (585)
Q Consensus 261 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 336 (585)
|..|+||||+|+..|+.++|++|++.|+ .+..|.||||+|+..++.++++.|++.| +++|.+|..|+||||+||.
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999993 5688999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHH
Q 007923 337 RKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMA 416 (585)
Q Consensus 337 ~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A 416 (585)
.|+.++|++||++|+|+|.+|..|+||||+|+..|+...+.. ||+.|++++.+|.+|.||||+|
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~----------------Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 162 GGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVEL----------------LLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH----------------HHHTTCCSCCCCTTSCCSGGGS
T ss_pred CCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHH----------------HHHCCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999999999999887765544 7899999999999999999999
Q ss_pred Hhhh
Q 007923 417 GDDL 420 (585)
Q Consensus 417 ~~~~ 420 (585)
++++
T Consensus 226 ~~~~ 229 (269)
T 4b93_B 226 EQNS 229 (269)
T ss_dssp CTTC
T ss_pred HhCC
Confidence 9743
No 26
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=304.87 Aligned_cols=201 Identities=13% Similarity=0.032 Sum_probs=193.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+. .++.
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~-~~~~ 138 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV-SGSW 138 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH-HTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923 242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL 317 (585)
Q Consensus 242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ 317 (585)
+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.|
T Consensus 139 ~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g- 213 (285)
T 3d9h_A 139 DCVNLLLQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG- 213 (285)
T ss_dssp HHHHHHHHTTCCSSC----SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred HHHHHHHHCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC-
Confidence 999999999999987 5569999999999999999999999983 5688999999999999999999999997
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923 318 ADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR 369 (585)
Q Consensus 318 advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 369 (585)
+++|. |..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.
T Consensus 214 a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 214 ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 99995 8999999999999999999999999999999999999999999983
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.7e-36 Score=292.10 Aligned_cols=204 Identities=17% Similarity=0.105 Sum_probs=193.0
Q ss_pred hhHHHHHHhcChhHHHHHHHhhcccccc-ccccCChHHHHHHHHhhHHHHHHHHhcC--CCccc-cCCCChhHHhhhccc
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILD-KVVADDILVVLSVAHMCGKACEKLLERC--IEITV-KSDIDIVTLDKTLPQ 237 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~-~~~~~~t~l~l~~a~~~~~~~~~Ll~~g--~din~-~d~~g~t~L~~A~~~ 237 (585)
.||||+|+..|..+++++|++.|.++.. .+..|.||+++|+..++.+++++|+++| ++++. .+..|.||||+|+.
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~- 81 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS- 81 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH-
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH-
Confidence 5899999999999999999999988765 8999999999999999999999999999 66666 88999999999999
Q ss_pred CCHHHHHHHHHHcC--CCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHH
Q 007923 238 HIVKQIIDLRVELS--LHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTE 311 (585)
Q Consensus 238 ~~~~~i~~~Ll~~g--a~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~ 311 (585)
.++.+++++|+++| ++++. ++..|.||||+|+..|+.+++++|+++|. .|..|+||||+|+..|+.+++++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNK---ITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTC---CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccc---CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 78999999999999 88888 89999999999999999999999999993 56889999999999999999999
Q ss_pred HHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHH
Q 007923 312 LLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLL-TKGARPSDLTLDGRKALQISKR 369 (585)
Q Consensus 312 LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll-~~gad~~~~d~~G~TpL~~A~~ 369 (585)
|++.+.+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+.
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 999988999999999999999999999999999999 8999999999999999999964
No 28
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-37 Score=320.79 Aligned_cols=215 Identities=13% Similarity=0.110 Sum_probs=201.9
Q ss_pred hhhhHHHHHHhcChhHHHHHHH--------hhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHH
Q 007923 160 FMVEVLYVSFAFQVPELVALYQ--------RHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTL 231 (585)
Q Consensus 160 f~~t~L~~A~~~~~~elv~~ll--------~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L 231 (585)
...||||+|+..|..+++++|+ +.|++++.++..|.|||++|+..++.+++++|+++|++++.++..|.|||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 3479999999999998777665 88999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCHHHHHHHHHHcC---CCCCCCCCCCCCCChHHHHHHhCC---CHHHHHHHHhCC-CCC-----------CCC
Q 007923 232 DKTLPQHIVKQIIDLRVELS---LHRSESCGFPDKHTKRIHRALDSD---DVELVRMLLKEA-HTN-----------LDD 293 (585)
Q Consensus 232 ~~A~~~~~~~~i~~~Ll~~g---a~in~~~~~d~~g~t~Lh~A~~~g---~~~~v~~Ll~~g-~~d-----------~~g 293 (585)
|+|+. .++.+++++|+++| ++++. .|..|.||||+|+..+ +.+++++|++.| +++ ..|
T Consensus 204 ~~A~~-~g~~~~v~~Ll~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 204 HQAAA-NRDFGMMVYMLNSTKLKGDIEE---LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp HHHHH-TTCHHHHHHHTTSHHHHHTTSC---CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred HHHHH-CCCHHHHHHHHhcCccccChhh---cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccC
Confidence 99999 79999999999998 89999 8999999999999998 899999999998 343 479
Q ss_pred chHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923 294 AHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 294 ~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
+||||+|+..|+.++|++|++.+++++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999999887
Q ss_pred Ccccc
Q 007923 374 ADYYI 378 (585)
Q Consensus 374 ~~~~~ 378 (585)
..+..
T Consensus 360 ~iv~~ 364 (373)
T 2fo1_E 360 NIVDI 364 (373)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-36 Score=306.97 Aligned_cols=229 Identities=14% Similarity=0.118 Sum_probs=123.4
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++++.+|..|+||||+|+. .++.
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~-~g~~ 119 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS-CGYL 119 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-HTCH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-cCCH
Confidence 345555555555555555555555555555555555555555555555555555555555555555555555555 3455
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCCCCC-----CCchHHHHHHHcCCHHHHHHHHhhC
Q 007923 242 QIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHTNL-----DDAHALHYAVAYCDAKTTTELLDLG 316 (585)
Q Consensus 242 ~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~d~-----~g~tpLh~A~~~g~~~~v~~LL~~~ 316 (585)
+++++|+++|++++. .+..|.||||+|+..++.++++.|+.....+. .+.++++ ..+..++..+
T Consensus 120 ~~v~~Ll~~g~~~~~---~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~ 188 (299)
T 1s70_B 120 DIAEYLISQGAHVGA---VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNSG 188 (299)
T ss_dssp HHHHHHHHTTCCTTC---CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCC---cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhcc
Confidence 555555555555555 45555555555555555555554443221110 0000000 0111222222
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHH
Q 007923 317 LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEIL 396 (585)
Q Consensus 317 ~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll 396 (585)
..+....+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+.. |+
T Consensus 189 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~----------------Ll 252 (299)
T 1s70_B 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI----------------LV 252 (299)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH----------------HH
T ss_pred CcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHH----------------HH
Confidence 22233345667777777777777777777777777777777777777777777665544432 56
Q ss_pred HhhhhcCCcccCCCCHHHHHHh
Q 007923 397 EQAERRDPLLREASHSFAMAGD 418 (585)
Q Consensus 397 ~~~~~~n~~~~~g~t~Lh~A~~ 418 (585)
+.+++++.+|..|.||||+|++
T Consensus 253 ~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 253 ENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HTTCCTTCCCTTSCCTTTSCCS
T ss_pred HcCCCCCCcCCCCCCHHHHHHH
Confidence 6677777777777777777765
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.7e-35 Score=285.86 Aligned_cols=216 Identities=17% Similarity=0.163 Sum_probs=197.2
Q ss_pred ccCChHHHHHHHHhhHHHHHHHHhcCCC-ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHH
Q 007923 192 VADDILVVLSVAHMCGKACEKLLERCIE-ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHR 270 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~~~~~Ll~~g~d-in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~ 270 (585)
..++++++.|+..++.+.+++|++.+.. ++.++..|.||||+|+. .++.+++++|+++|++++. +|..|+||||+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~ 79 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACS-AGHTEIVEFLLQLGVPVND---KDDAGWSPLHI 79 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCSCC---CCTTSCCHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHH-cCcHHHHHHHHHhCCCCCC---cCCCCCCHHHH
Confidence 3468899999999999999999988654 78889999999999999 7999999999999999999 89999999999
Q ss_pred HHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923 271 ALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL 346 (585)
Q Consensus 271 A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 346 (585)
|+..|+.+++++|+++|. .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999999999993 5788999999999999999999999988 99999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHH
Q 007923 347 LTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLY 426 (585)
Q Consensus 347 l~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~ 426 (585)
+++|++++.+|..|+||||+|+..++...+.. |++.+++++.+|..|.||||+|+..++..+..
T Consensus 159 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 222 (231)
T 3aji_A 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKF----------------LVTQGASIYIENKEEKTPLQVAKGGLGLILKR 222 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH----------------HHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred HhcCCCccccCCCCCCHHHHHHHCCCHHHHHH----------------HHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHH
Confidence 99999999999999999999999887655543 78899999999999999999999855555444
Q ss_pred HH
Q 007923 427 LE 428 (585)
Q Consensus 427 l~ 428 (585)
+.
T Consensus 223 lL 224 (231)
T 3aji_A 223 LA 224 (231)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 31
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-36 Score=303.85 Aligned_cols=196 Identities=16% Similarity=0.121 Sum_probs=175.6
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
..||||+|+..|..+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+. .+.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-~~~ 151 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE-EAM 151 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS-HHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh-cch
Confidence 3799999999999999999999999999999999999999999999999999999999999999999999999999 788
Q ss_pred HHHHHHHHH-cCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHh
Q 007923 241 KQIIDLRVE-LSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH-----TNLDDAHALHYAVAYCDAKTTTELLD 314 (585)
Q Consensus 241 ~~i~~~Ll~-~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~ 314 (585)
.++++.|+. .|++++. .+..+.++++. .+..++..+. .+..|.||||+|+..|+.+++++|++
T Consensus 152 ~~~~~~ll~~~~~~~~~---~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEA---ARKEEERIMLR--------DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ 220 (299)
T ss_dssp HHHHHHHHHHHTCCHHH---HHHHHHHHHHH--------HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHhhcCCCchh---hhhhhhhHHHH--------HHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 999887775 5777776 44445555543 3445555552 45789999999999999999999999
Q ss_pred hCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923 315 LGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR 369 (585)
Q Consensus 315 ~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 369 (585)
.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 221 ~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 221 AR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred cC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 88 9999999999999999999999999999999999999999999999999964
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.2e-35 Score=285.78 Aligned_cols=208 Identities=15% Similarity=0.070 Sum_probs=189.0
Q ss_pred CChHHHHHHHHhhHHHHHHHHhcCCCccc-cCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 194 DDILVVLSVAHMCGKACEKLLERCIEITV-KSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~~~~~Ll~~g~din~-~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
|+||+++|+..++.+++++|+++|.+++. +|..|.||||+|+. .++.+++++|+++|++++.....+..|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVS-FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHH-cCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 68999999999999999999999988765 89999999999999 79999999999999655542224789999999999
Q ss_pred hCCCHHHHHHHHhCC--C----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923 273 DSDDVELVRMLLKEA--H----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL 346 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g--~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 346 (585)
..|+.+++++|++.| . .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999997 2 5678999999999999999999999997 99999999999999999999999999999
Q ss_pred HHcC-CCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHH-HhhhhcCCcccCCCCHHHHHHhh
Q 007923 347 LTKG-ARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEIL-EQAERRDPLLREASHSFAMAGDD 419 (585)
Q Consensus 347 l~~g-ad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll-~~~~~~n~~~~~g~t~Lh~A~~~ 419 (585)
+++| ++++.+|..|+||||+|+..++...+.. |+ +.+++++.+|..|.||||+|++.
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~----------------Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL----------------LVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHH----------------HHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHH----------------HHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 9999 9999999999999999999887665543 77 78999999999999999999863
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-35 Score=285.35 Aligned_cols=202 Identities=15% Similarity=0.126 Sum_probs=182.8
Q ss_pred ChhHHHHHHHhhccccccc-cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHc
Q 007923 172 QVPELVALYQRHLLDILDK-VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVEL 250 (585)
Q Consensus 172 ~~~elv~~ll~~g~~~~~~-~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ 250 (585)
|..+++++|+++|.+++.. +..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVS-ADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc
Confidence 4567788899999998876 7889999999999999999999999999999999999999999999 7899999999999
Q ss_pred CC-CCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCC
Q 007923 251 SL-HRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNS 325 (585)
Q Consensus 251 ga-~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~ 325 (585)
++ +++. .+..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| ++++.+|.
T Consensus 81 ~~~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 156 (223)
T 2f8y_A 81 RATDLDA---RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNN 156 (223)
T ss_dssp TTSCTTC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT
T ss_pred CCCCccc---CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCC
Confidence 87 8888 88999999999999999999999999983 5678999999999999999999999997 99999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 326 RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 326 ~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++...+..
T Consensus 157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 209 (223)
T 2f8y_A 157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 209 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHH
Confidence 99999999999999999999999999999999999999999999887665554
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=283.91 Aligned_cols=215 Identities=14% Similarity=0.108 Sum_probs=200.2
Q ss_pred chhhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCC-ChhHHhhhccc
Q 007923 159 DFMVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDI-DIVTLDKTLPQ 237 (585)
Q Consensus 159 df~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~-g~t~L~~A~~~ 237 (585)
++..|+|+.|+..|..+++++|++.|++++..+..|.||+++|+..++.+++++|+++|++++..+.. |.||||+|+.
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~- 85 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR- 85 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH-
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH-
Confidence 35578999999999999999999999999999999999999999999999999999999999876644 9999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCC-HHHHHHH
Q 007923 238 HIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCD-AKTTTEL 312 (585)
Q Consensus 238 ~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~-~~~v~~L 312 (585)
.++.+++++|++.|++++. ++..|.||||+|+..|+.+++++|+++|. .|..|.||||+|+..++ .+++++|
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~---~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSL---IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred cCCHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 7999999999999999999 89999999999999999999999999983 67889999999997776 7888888
Q ss_pred HhhCCCCcccCCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 313 LDLGLADVNHRNS-RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 313 L~~~~advn~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+..+ ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.++...+..
T Consensus 163 ~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 228 (240)
T 3eu9_A 163 LTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINH 228 (240)
T ss_dssp HHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 8887 99999997 99999999999999999999999999999999999999999999887766654
No 35
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-36 Score=310.82 Aligned_cols=251 Identities=13% Similarity=0.073 Sum_probs=200.0
Q ss_pred cChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccC-----------------CCChhHHhh
Q 007923 171 FQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKS-----------------DIDIVTLDK 233 (585)
Q Consensus 171 ~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d-----------------~~g~t~L~~ 233 (585)
....+++++|+++|++++..+..|.++++ ++.+++++|+++|++++... ....+.+|.
T Consensus 29 ~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 103 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 103 (327)
T ss_dssp ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHH
Confidence 34456799999999999999999999765 99999999999999876511 111223466
Q ss_pred hcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCC---H
Q 007923 234 TLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCD---A 306 (585)
Q Consensus 234 A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~---~ 306 (585)
|+. ....+++++|++.|+++|.. +|..|+||||+|+..|+.++|++||++|+ .|..|+||||+|+..|+ .
T Consensus 104 a~~-~~~~~~~~~l~~~g~dvn~~--~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 104 SFD-SLLQEVNDAFPNTQLNLNIP--VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp CHH-HHHHHHHHHCTTSCCCSCSC--CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHH-hhHHHHHHHHHhcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 666 67789999999999999982 38899999999999999999999999994 67889999999999998 7
Q ss_pred HHHHHHHhhCCCCcccCCCCCChHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCCCCCC
Q 007923 307 KTTTELLDLGLADVNHRNSRGYTVLHVAAM----RKEPKIIVSLLTK--------------------GARPSDLTLDGRK 362 (585)
Q Consensus 307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~----~g~~~iv~~Ll~~--------------------gad~~~~d~~G~T 362 (585)
++++.|++.+.++++.+|..|+||||+|+. .|+.+++++|++. |++++.+|..|+|
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------C
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCC
Confidence 888999988778999999999999999999 8999999999987 8999999999999
Q ss_pred HHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCC
Q 007923 363 ALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEA 442 (585)
Q Consensus 363 pL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g 442 (585)
|||+|+. + ..|++. ++|.+|..|+||||+|+..++.+++.++-..++.....+..|
T Consensus 261 ~L~~a~~------~----------------~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 316 (327)
T 1sw6_A 261 SILENLD------L----------------KWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG 316 (327)
T ss_dssp HHHHHCS------H----------------HHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hhHHHHH------H----------------HHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 9999974 2 225555 689999999999999999999999888888888888899999
Q ss_pred chhhHHhhhcC
Q 007923 443 KVIMDIVHLDG 453 (585)
Q Consensus 443 ~t~l~~A~~~~ 453 (585)
+||||+|+..|
T Consensus 317 ~TpL~~A~~~g 327 (327)
T 1sw6_A 317 LRPVDFGAGLE 327 (327)
T ss_dssp CCGGGGTCC--
T ss_pred CCHHHHHHhcC
Confidence 99999997654
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.3e-35 Score=282.82 Aligned_cols=202 Identities=16% Similarity=0.140 Sum_probs=182.7
Q ss_pred hhHHHHHHHHhcCCCcccc-CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHH
Q 007923 205 MCGKACEKLLERCIEITVK-SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRML 283 (585)
Q Consensus 205 ~~~~~~~~Ll~~g~din~~-d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 283 (585)
++.+++++|+++|++++.. |..|.||||+|+. .++.+++++|+++|++++. ++..|+||||+|+..|+.+++++|
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAAR-YSRSDAAKRLLEASADANI---QDNMGRTPLHAAVSADAQGVFQIL 77 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHH-cCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3567788999999999876 8899999999999 7999999999999999999 899999999999999999999999
Q ss_pred HhCCC-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 007923 284 LKEAH-----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTL 358 (585)
Q Consensus 284 l~~g~-----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 358 (585)
++.+. .+..|.||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 78 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 78 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99883 4678999999999999999999999987 99999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHH
Q 007923 359 DGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYL 427 (585)
Q Consensus 359 ~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l 427 (585)
.|+||||+|+..++...+.. |++.+++++.++..|.||||+|+..++.+++.+
T Consensus 157 ~g~t~L~~A~~~~~~~~v~~----------------Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 209 (223)
T 2f8y_A 157 REETPLFLAAREGSYETAKV----------------LLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 209 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHH----------------HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHH----------------HHHcCCCCccccccCCCHHHHHHHhcchHHHHH
Confidence 99999999999887665543 788999999999999999999998444444333
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.2e-35 Score=296.81 Aligned_cols=218 Identities=16% Similarity=0.042 Sum_probs=193.1
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVK 241 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~ 241 (585)
.||||+|+..|..+++++|+++|++++.. +|.||+++|+..++.+++++|+++|++++.+|..|+||||+|+. .++.
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~-~g~~ 108 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD-SGNM 108 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH-cCCH
Confidence 68999999999999999999999999888 48999999999999999999999999999999999999999999 7999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCC-ChHHHHHHhCCCHHHHHHHHhCCC--CCC-CCchHHHHHHHcCCHHHHHHHHhhCC
Q 007923 242 QIIDLRVELSLHRSESCGFPDKH-TKRIHRALDSDDVELVRMLLKEAH--TNL-DDAHALHYAVAYCDAKTTTELLDLGL 317 (585)
Q Consensus 242 ~i~~~Ll~~ga~in~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~g~--~d~-~g~tpLh~A~~~g~~~~v~~LL~~~~ 317 (585)
+++++|+++|++++. ++..| .||||+|+..|+.+++++|+++|+ .+. .|+||||+|+..|+.+++++|++.|
T Consensus 109 ~~v~~Ll~~ga~~~~---~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g- 184 (285)
T 3kea_A 109 QTVKLFVKKNWRLMF---YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM- 184 (285)
T ss_dssp HHHHHHHHHCGGGGG---CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHH-
T ss_pred HHHHHHHhcCCCCCc---cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcC-
Confidence 999999999999999 89999 799999999999999999999994 344 7899999999999999999999997
Q ss_pred CCcccCCCCCChH-HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHH
Q 007923 318 ADVNHRNSRGYTV-LHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEIL 396 (585)
Q Consensus 318 advn~~d~~G~Tp-Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll 396 (585)
+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..++...+ ..|+
T Consensus 185 ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv----------------~~Ll 241 (285)
T 3kea_A 185 TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIA----------------KMII 241 (285)
T ss_dssp HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHH----------------HHHH
T ss_pred CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHH----------------HHHH
Confidence 9999999999998 9999999999999999999999999883 23333332222 2368
Q ss_pred HhhhhcCCcccCC
Q 007923 397 EQAERRDPLLREA 409 (585)
Q Consensus 397 ~~~~~~n~~~~~g 409 (585)
+.|.+++......
T Consensus 242 ~~g~~~~~~~~~~ 254 (285)
T 3kea_A 242 EKHVEYKSDSYTK 254 (285)
T ss_dssp HHHHHHTTCTTTT
T ss_pred HcCCCCCCccccc
Confidence 8888877655444
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=276.97 Aligned_cols=218 Identities=15% Similarity=0.113 Sum_probs=173.2
Q ss_pred cccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCCh
Q 007923 187 ILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTK 266 (585)
Q Consensus 187 ~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t 266 (585)
++..+..+.++++.|+..++.+++++|+++|++++.++..|.||||+|+. .++.+++++|++.|++++.. .+..|.|
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~--~~~~~~t 78 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAI-NNRIDLVKYYISKGAIVDQL--GGDLNST 78 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTCC--BTTTTBC
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHH-hCCHHHHHHHHHcCCcchhh--cCCcCCC
Confidence 34556777888888888888888888888888888888888888888888 68888888888888887762 2445888
Q ss_pred HHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC-HH
Q 007923 267 RIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE-PK 341 (585)
Q Consensus 267 ~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~-~~ 341 (585)
|||+|+..|+.+++++|++.|. .|..|.||||+|+..|+.+++++|++.+ ++++.++..|.||||+|+..++ .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHH
Confidence 8888888888888888888873 5577888888888888888888888877 8888888888888888886665 78
Q ss_pred HHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh
Q 007923 342 IIVSLLTKGARPSDLTL-DGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL 420 (585)
Q Consensus 342 iv~~Ll~~gad~~~~d~-~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~ 420 (585)
++++|++.|++++..+. .|.||||+|+..++...+.. |++.+++++..+..|.||||+|+..+
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL----------------LLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHH----------------HHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHH----------------HHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 88888888888888886 88888888888776654433 67788888888888888888888744
Q ss_pred hhHH
Q 007923 421 RMKL 424 (585)
Q Consensus 421 ~~~~ 424 (585)
+..+
T Consensus 222 ~~~~ 225 (240)
T 3eu9_A 222 NVWM 225 (240)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 3333
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.6e-34 Score=290.57 Aligned_cols=210 Identities=12% Similarity=0.079 Sum_probs=188.3
Q ss_pred cChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHc
Q 007923 171 FQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVEL 250 (585)
Q Consensus 171 ~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ 250 (585)
+...++.++|.+. +++.++..|.||+++|+..++.+++++|+++|++++.++ |+||||+|+. .++.+++++|+++
T Consensus 10 ~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~-~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 10 WKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAAT-LEDTKIVKILLFS 84 (285)
T ss_dssp CCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTT-SSSCHHHHHHHHT
T ss_pred cCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHH-cCCHHHHHHHHHC
Confidence 4556677777766 578899999999999999999999999999999999984 8999999999 7999999999999
Q ss_pred CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCC-chHHHHHHHcCCHHHHHHHHhhCCCCcccCCC
Q 007923 251 SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDD-AHALHYAVAYCDAKTTTELLDLGLADVNHRNS 325 (585)
Q Consensus 251 ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g-~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~ 325 (585)
|++++. +|..|+||||+|+..|+.++|++|+++|+ .|..| .||||+|+..|+.+++++|++.+ +++... .
T Consensus 85 ga~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~ 159 (285)
T 3kea_A 85 GLDDSQ---FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PSTFDL-A 159 (285)
T ss_dssp TCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-CTTCCC-S
T ss_pred CCCCCC---cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-Cccccc-c
Confidence 999999 89999999999999999999999999993 66778 79999999999999999999998 666322 2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCC
Q 007923 326 RGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKA-LQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDP 404 (585)
Q Consensus 326 ~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp-L~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~ 404 (585)
.|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..++...+.. |++.|++++.
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~----------------Ll~~gad~~~ 223 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA----------------LFKYDINIYS 223 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH----------------HTTSCBCSTT
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH----------------HHHcCCCCCC
Confidence 89999999999999999999999999999999999998 999999887665544 6778888888
Q ss_pred cc
Q 007923 405 LL 406 (585)
Q Consensus 405 ~~ 406 (585)
.+
T Consensus 224 ~~ 225 (285)
T 3kea_A 224 AN 225 (285)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4.5e-33 Score=270.45 Aligned_cols=179 Identities=18% Similarity=0.158 Sum_probs=101.4
Q ss_pred CChHHHHHHHHhhHHHHHHHHhc-CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCC-----CCCCCCCCCCChH
Q 007923 194 DDILVVLSVAHMCGKACEKLLER-CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHR-----SESCGFPDKHTKR 267 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~~~~~Ll~~-g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~i-----n~~~~~d~~g~t~ 267 (585)
|+||+++|+..++.+++++|++. |++++.+|..|+||||+|+. .++.+++++|+++|+++ +. +|..|+||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~---~~~~g~t~ 78 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAAL-YDNLEAAMVLMEAAPELVFEPMTS---ELYEGQTA 78 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHHCGGGGGCCCCS---TTTTTCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH-cCCHHHHHHHHHcCchhccccccc---cCCCCcCH
Confidence 44555555555555555555554 55555555555555555555 45555555555555543 22 34455555
Q ss_pred HHHHHhCCCHHHHHHHHhCCC-C----------------CCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChH
Q 007923 268 IHRALDSDDVELVRMLLKEAH-T----------------NLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTV 330 (585)
Q Consensus 268 Lh~A~~~g~~~~v~~Ll~~g~-~----------------d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~Tp 330 (585)
||+|+..|+.+++++|+++|. + |..|+||||+|+..|+.+++++|++.| +++|.+|..|+||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~ 157 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNTV 157 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCH
Confidence 555555555555555555552 1 124666666666666666666666665 6666666666666
Q ss_pred HHHHHHcCCHHHH----HHHHHcCCCC------CCCCCCCCCHHHHHHHcCCCCccc
Q 007923 331 LHVAAMRKEPKII----VSLLTKGARP------SDLTLDGRKALQISKRLTKAADYY 377 (585)
Q Consensus 331 Lh~Aa~~g~~~iv----~~Ll~~gad~------~~~d~~G~TpL~~A~~~~~~~~~~ 377 (585)
||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|++.++...+.
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~ 214 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQ 214 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHH
Confidence 6666666666655 6666666665 356666666666666665554443
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.4e-35 Score=285.09 Aligned_cols=180 Identities=19% Similarity=0.211 Sum_probs=106.4
Q ss_pred ccccCChHHHHHHHHhhHHHHHHHHhcCC----CccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 007923 190 KVVADDILVVLSVAHMCGKACEKLLERCI----EITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHT 265 (585)
Q Consensus 190 ~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~----din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~ 265 (585)
++.+|.|||++|+..++.+++++|++.+. ++|.++..|.||||+|+. .++.+++++|+++|++++. +|..|+
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~ 79 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI-TNQPEIAEALLGAGCDPEL---RDFRGN 79 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHH-TTCHHHHHCCCSCCCCSCC---CCTTCC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC---cCCCCC
Confidence 45556666666666666555555555443 456666666666666666 4566666666666666666 566666
Q ss_pred hHHHHHHhCCCHHHHHHHHhCCC----------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCC-CCChHHHHH
Q 007923 266 KRIHRALDSDDVELVRMLLKEAH----------TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNS-RGYTVLHVA 334 (585)
Q Consensus 266 t~Lh~A~~~g~~~~v~~Ll~~g~----------~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~-~G~TpLh~A 334 (585)
||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| ++++.++. .|+||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHHHHH
Confidence 66666666666666666666542 2345666666666666666666666665 66666665 666666666
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923 335 AMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA 374 (585)
Q Consensus 335 a~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 374 (585)
+..|+.+++++|+++|++++.+|..|+||||+|+..++..
T Consensus 159 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp HHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH
Confidence 6666666666666666666666666666666666554443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=4.6e-33 Score=270.37 Aligned_cols=192 Identities=12% Similarity=0.054 Sum_probs=176.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhh-ccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCc-----cccCCCChhHHhhhc
Q 007923 162 VEVLYVSFAFQVPELVALYQRH-LLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEI-----TVKSDIDIVTLDKTL 235 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~-g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~di-----n~~d~~g~t~L~~A~ 235 (585)
.||||+|+..|..+++++|++. |++++.++..|.||+++|+..++.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~ 83 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAV 83 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHH
Confidence 5899999999999999999987 9999999999999999999999999999999999997 677889999999999
Q ss_pred ccCCHHHHHHHHHHcCCCCCCCCCCCC-------------CCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHH
Q 007923 236 PQHIVKQIIDLRVELSLHRSESCGFPD-------------KHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALH 298 (585)
Q Consensus 236 ~~~~~~~i~~~Ll~~ga~in~~~~~d~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh 298 (585)
. .++.+++++|+++|++++. ++. .|.||||+|+..|+.+++++|+++|+ .|..|+||||
T Consensus 84 ~-~~~~~~v~~Ll~~g~~~~~---~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 159 (232)
T 2rfa_A 84 I-NQNVNLVRALLARGASVSA---RATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLH 159 (232)
T ss_dssp H-TTCHHHHHHHHHTTCCTTC---CCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred H-cCCHHHHHHHHhCCCCCCc---ccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 9 7999999999999999998 554 79999999999999999999999993 6788999999
Q ss_pred HHHHcCCHHHH----HHHHhhCCCCc------ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 007923 299 YAVAYCDAKTT----TELLDLGLADV------NHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTL 358 (585)
Q Consensus 299 ~A~~~g~~~~v----~~LL~~~~adv------n~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 358 (585)
+|+..|+.+++ ++|++.| +++ +.+|..|+||||+|+..|+.+++++|+++|++......
T Consensus 160 ~A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 228 (232)
T 2rfa_A 160 ILILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHH 228 (232)
T ss_dssp HHHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhc
Confidence 99999999988 8999888 887 68999999999999999999999999999987765543
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.6e-33 Score=255.30 Aligned_cols=155 Identities=17% Similarity=0.233 Sum_probs=141.6
Q ss_pred hHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCC
Q 007923 196 ILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSD 275 (585)
Q Consensus 196 t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g 275 (585)
+.|+.|+..|+.++|++|+++|+|+|.+|..|+||||+|+. .+..+++++|++.|++++. +|..|+||||+|+..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~-~~~~~~~~~ll~~gad~~~---~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAE-NGHKEVVKLLISKGADVNA---KDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhcccchhh---hccCCCCHHHHHHHcC
Confidence 35788899999999999999999999999999999999999 7999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q 007923 276 DVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGA 351 (585)
Q Consensus 276 ~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ga 351 (585)
+.++|++|+++|+ .|.+|+||||+|+..|+.++|++||+.| +|++.+|..|+||||+|+.+|+.+++++|+++||
T Consensus 82 ~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 82 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999999993 6788999999999999999999999998 9999999999999999999999999999999999
Q ss_pred CCCC
Q 007923 352 RPSD 355 (585)
Q Consensus 352 d~~~ 355 (585)
+++.
T Consensus 161 ~ie~ 164 (169)
T 4gpm_A 161 WLEH 164 (169)
T ss_dssp ----
T ss_pred CcCC
Confidence 9875
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-34 Score=293.10 Aligned_cols=219 Identities=10% Similarity=0.036 Sum_probs=175.5
Q ss_pred ChhHHHHHHHhhccccccccc--------------cC---ChHHHHHHHHhhHHHHHHHHhcCCCccc-cCCCChhHHhh
Q 007923 172 QVPELVALYQRHLLDILDKVV--------------AD---DILVVLSVAHMCGKACEKLLERCIEITV-KSDIDIVTLDK 233 (585)
Q Consensus 172 ~~~elv~~ll~~g~~~~~~~~--------------~~---~t~l~l~~a~~~~~~~~~Ll~~g~din~-~d~~g~t~L~~ 233 (585)
|..+++++|+++|++++.... .+ ....++++.....+++++|++.|+++|. +|..|+||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 899999999999988765211 11 1223566666788899999999999999 89999999999
Q ss_pred hcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCC---HHHHHHHHhCC-----CCCCCCchHHHHHHH---
Q 007923 234 TLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDD---VELVRMLLKEA-----HTNLDDAHALHYAVA--- 302 (585)
Q Consensus 234 A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-----~~d~~g~tpLh~A~~--- 302 (585)
|+. .++.+++++|+++|++++. +|..|+||||+|+..|+ .++++.|++.+ ..|..|+||||+|+.
T Consensus 138 Aa~-~g~~~~v~~Ll~~Gad~n~---~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~ 213 (327)
T 1sw6_A 138 LTS-IANLELVKHLVKHGSNRLY---GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSG 213 (327)
T ss_dssp HHH-TTCHHHHHHHHHTTCCTTB---CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHT
T ss_pred HHH-cCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcc
Confidence 999 7999999999999999999 89999999999999998 56667776665 267899999999999
Q ss_pred -cCCHHHHHHHHhhC-------------------CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 007923 303 -YCDAKTTTELLDLG-------------------LADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRK 362 (585)
Q Consensus 303 -~g~~~~v~~LL~~~-------------------~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~T 362 (585)
.|+.++++.|++.+ ++++|.+|..|+||||+|+. +++|+++ +++.+|.+|+|
T Consensus 214 ~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~T 285 (327)
T 1sw6_A 214 MTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDT 285 (327)
T ss_dssp STTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCC
T ss_pred ccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCC
Confidence 89999999999873 49999999999999999985 9999998 68899999999
Q ss_pred HHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHh
Q 007923 363 ALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGD 418 (585)
Q Consensus 363 pL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~ 418 (585)
|||+|+..++...+.. ||+.+++++.+|..|.||||+|++
T Consensus 286 pLh~A~~~g~~~~v~~----------------Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 286 CLNIAARLGNISIVDA----------------LLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHHHHHHCCHHHHHH----------------HHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred HHHHHHHcCCHHHHHH----------------HHHcCCCCcccCCCCCCHHHHHHh
Confidence 9999999987766544 889999999999999999999986
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.2e-34 Score=278.75 Aligned_cols=203 Identities=15% Similarity=0.072 Sum_probs=185.2
Q ss_pred hhHHHHHHhcChhHHHHHHHhhcc----ccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhccc
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLL----DILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQ 237 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~----~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~ 237 (585)
.||||+|+..|..+++++|++.+. +++..+..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+.
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~- 87 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACE- 87 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHH-
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-
Confidence 689999999999999999987765 789999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCC------CCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCC-CCchHHHHHHHcCCH
Q 007923 238 HIVKQIIDLRVELSLH------RSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNL-DDAHALHYAVAYCDA 306 (585)
Q Consensus 238 ~~~~~i~~~Ll~~ga~------in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~-~g~tpLh~A~~~g~~ 306 (585)
.++.+++++|++.|++ ++. .+..|.||||+|+..|+.++|++|+++|+ .+. .|+||||+|+..|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 88 QGCLASVGVLTQSCTTPHLHSILKA---TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp HTCHHHHHHHHHSTTTTSSSCGGGC---CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred cCCHHHHHHHHhcccchhHHHHhhc---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 7999999999999986 455 78899999999999999999999999993 444 899999999999999
Q ss_pred HHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHH
Q 007923 307 KTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPS--DLTLDGRKALQISKR 369 (585)
Q Consensus 307 ~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~--~~d~~G~TpL~~A~~ 369 (585)
+++++|++.| ++++.+|..|+||||+|+.+|+.+++++|+++|++.. ..+..|.||...+..
T Consensus 165 ~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 165 DLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp HHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 9999999997 9999999999999999999999999999999999765 788899998765543
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5.3e-32 Score=256.73 Aligned_cols=185 Identities=15% Similarity=0.111 Sum_probs=138.8
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhcc-ccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCC
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLL-DILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHI 239 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~-~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~ 239 (585)
..||||.|+..|..+.++.|+..+. +++..+..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+. .+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-~~ 83 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA-QG 83 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-cC
Confidence 3567777777777777777776654 777777777777777777777777777777777777777777777777777 67
Q ss_pred HHHHHHHHH-HcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-C----CCCCCchHHHHHHHcCC-----HHH
Q 007923 240 VKQIIDLRV-ELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-H----TNLDDAHALHYAVAYCD-----AKT 308 (585)
Q Consensus 240 ~~~i~~~Ll-~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~----~d~~g~tpLh~A~~~g~-----~~~ 308 (585)
+.+++++|+ ..+++++. ++..|.||||+|+..|+.+++++|++.| . .|..|+||||+|+..++ .++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~ 160 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNK---HNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDI 160 (201)
T ss_dssp CHHHHHHHHHHSCCCTTC---CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHH
T ss_pred CHHHHHHHHhccCccccc---ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHH
Confidence 777777777 45567777 6777777777777777777777777776 2 45667777777777776 777
Q ss_pred HHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 007923 309 TTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG 350 (585)
Q Consensus 309 v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 350 (585)
+++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 161 v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 161 VKLLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 77777776 777777777777777777777777777777765
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.8e-32 Score=258.67 Aligned_cols=183 Identities=18% Similarity=0.132 Sum_probs=170.8
Q ss_pred ccCChHHHHHHHHhhHHHHHHHHhcCC-CccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHH
Q 007923 192 VADDILVVLSVAHMCGKACEKLLERCI-EITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHR 270 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~~~~~Ll~~g~-din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~ 270 (585)
..+.|+++.|+..++.+.++.|+..+. +++.+|..|.||||+|+. .++.+++++|+++|++++. ++..|.||||+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVH-NNDIEIAKALIDRGADINL---QNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC---CCCCCCCHHHH
Confidence 457889999999999999999999876 999999999999999999 7999999999999999999 89999999999
Q ss_pred HHhCCCHHHHHHHHhCC--C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCC-----H
Q 007923 271 ALDSDDVELVRMLLKEA--H---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKE-----P 340 (585)
Q Consensus 271 A~~~g~~~~v~~Ll~~g--~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~-----~ 340 (585)
|+..|+.+++++|++.+ + .|..|.||||+|+..|+.+++++|++.++++++.+|..|+||||+|+..++ .
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 99999999999999544 2 567899999999999999999999999889999999999999999999998 9
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 341 KIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 341 ~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+++++|+++|++++.+|..|+||||+|+..++...+..
T Consensus 159 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196 (201)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHH
Confidence 99999999999999999999999999999887765544
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=1.2e-32 Score=271.85 Aligned_cols=188 Identities=18% Similarity=0.120 Sum_probs=166.9
Q ss_pred hhhHHHHHHhcChhH----HHHHHHhhcccccc----ccccCChHHHHHHHH---hhHHHHHHHHhcCCCcccc------
Q 007923 161 MVEVLYVSFAFQVPE----LVALYQRHLLDILD----KVVADDILVVLSVAH---MCGKACEKLLERCIEITVK------ 223 (585)
Q Consensus 161 ~~t~L~~A~~~~~~e----lv~~ll~~g~~~~~----~~~~~~t~l~l~~a~---~~~~~~~~Ll~~g~din~~------ 223 (585)
..||||+|+..|..+ ++++|+++|++++. ++..|.||+++|+.. ++.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 368999999999997 77788889999998 899999999999998 9999999999999887743
Q ss_pred -----CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCC-------------CChHHHHHHhCCCHHHHHHHHh
Q 007923 224 -----SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDK-------------HTKRIHRALDSDDVELVRMLLK 285 (585)
Q Consensus 224 -----d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~-------------g~t~Lh~A~~~g~~~~v~~Ll~ 285 (585)
|..|.||||+|+. .++.+++++|+++|++++. ++.. |.||||+|+..|+.++|++|++
T Consensus 82 ~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~---~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIE-KRSLQCVKLLVENGADVHL---RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp CCCSTTTTTCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc---ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3679999999999 7999999999999999998 6765 9999999999999999999999
Q ss_pred ---CCC----CCCCCchHHHHHHH--cCCHH-------HHHHHHhhCCCCc-------ccCCCCCChHHHHHHHcCCHHH
Q 007923 286 ---EAH----TNLDDAHALHYAVA--YCDAK-------TTTELLDLGLADV-------NHRNSRGYTVLHVAAMRKEPKI 342 (585)
Q Consensus 286 ---~g~----~d~~g~tpLh~A~~--~g~~~-------~v~~LL~~~~adv-------n~~d~~G~TpLh~Aa~~g~~~i 342 (585)
.|+ .|..|+||||+|+. .++.+ ++++|++.| +++ +.+|..|+||||+|+..|+.++
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 773 67889999999998 78888 999999988 999 8899999999999999999999
Q ss_pred HHHHHHcCCCC
Q 007923 343 IVSLLTKGARP 353 (585)
Q Consensus 343 v~~Ll~~gad~ 353 (585)
+++|+++|++.
T Consensus 237 v~~Ll~~g~~~ 247 (256)
T 2etb_A 237 FRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhCCCCC
Confidence 99999988754
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.8e-32 Score=273.40 Aligned_cols=200 Identities=14% Similarity=0.126 Sum_probs=167.2
Q ss_pred hhhHHHHHHhcChhHHHHHHHh----hccccc----cccccCChHHHHHHHH---hhHHHHHHHHhcCCC-------ccc
Q 007923 161 MVEVLYVSFAFQVPELVALYQR----HLLDIL----DKVVADDILVVLSVAH---MCGKACEKLLERCIE-------ITV 222 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~----~g~~~~----~~~~~~~t~l~l~~a~---~~~~~~~~Ll~~g~d-------in~ 222 (585)
..||||+|+..|..++++.|++ .+.+++ ..+..|.|||++|+.. ++.+++++|+++|++ +|.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 3799999999999998887776 455555 3478899999999987 899999999999876 333
Q ss_pred ----cCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCC--------------CCChHHHHHHhCCCHHHHHHHH
Q 007923 223 ----KSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPD--------------KHTKRIHRALDSDDVELVRMLL 284 (585)
Q Consensus 223 ----~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~--------------~g~t~Lh~A~~~g~~~~v~~Ll 284 (585)
+|..|.||||+|+. .++.+++++|+++|++++. ++. .|.||||+|+..|+.++|++|+
T Consensus 93 ~~~~~d~~g~tpL~~A~~-~g~~~~v~~Ll~~ga~~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIE-RRNMTLVTLLVENGADVQA---AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp CCCSTTTTTCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred ccccccCCCCCHHHHHHH-cCCHHHHHHHHHCCCCcCc---cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 56789999999999 7999999999999999999 676 7999999999999999999999
Q ss_pred h---CCC----CCCCCchHHHHHHHcCC---------HHHHHHHHhhCCCCcc-------cCCCCCChHHHHHHHcCCHH
Q 007923 285 K---EAH----TNLDDAHALHYAVAYCD---------AKTTTELLDLGLADVN-------HRNSRGYTVLHVAAMRKEPK 341 (585)
Q Consensus 285 ~---~g~----~d~~g~tpLh~A~~~g~---------~~~v~~LL~~~~advn-------~~d~~G~TpLh~Aa~~g~~~ 341 (585)
+ .|. .|..|+||||+|+..|+ .+++++|++.| +++| .+|..|+||||+|+..|+.+
T Consensus 169 ~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 169 QNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 9 773 67899999999999998 89999999998 9997 48999999999999999999
Q ss_pred HHHHHHHcCC-CCCCCCCCCCCHHH
Q 007923 342 IIVSLLTKGA-RPSDLTLDGRKALQ 365 (585)
Q Consensus 342 iv~~Ll~~ga-d~~~~d~~G~TpL~ 365 (585)
++++|+++|| |+......+++|-+
T Consensus 248 iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 248 VLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHTC--------------
T ss_pred HHHHHHHCCCCCchhhhhhhhhccC
Confidence 9999999999 89888888877754
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.2e-31 Score=247.75 Aligned_cols=145 Identities=23% Similarity=0.285 Sum_probs=138.1
Q ss_pred hHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcC
Q 007923 229 VTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYC 304 (585)
Q Consensus 229 t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g 304 (585)
++|+.|+. .|+.++|++|+++|+|+|. +|..|+||||+|+..++.+++++|++.|. .|.+|+||||+|+..|
T Consensus 6 ~~L~~Aa~-~G~~~~v~~Ll~~Gadvn~---~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAE-NGNKDRVKDLIENGADVNA---SDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHH-cCCHHHHHHHHHCCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcC
Confidence 57999999 8999999999999999999 89999999999999999999999999993 6788999999999999
Q ss_pred CHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 305 DAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 305 ~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+.++|++||+.| +|+|.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|++.++...+..
T Consensus 82 ~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 82 HKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999998 9999999999999999999999999999999999999999999999999999887766654
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.8e-32 Score=270.53 Aligned_cols=183 Identities=19% Similarity=0.158 Sum_probs=164.9
Q ss_pred CChHHHHHHHHhhHH----HHHHHHhcCCCccc----cCCCChhHHhhhcccC---CHHHHHHHHHHcCCCCCCCC----
Q 007923 194 DDILVVLSVAHMCGK----ACEKLLERCIEITV----KSDIDIVTLDKTLPQH---IVKQIIDLRVELSLHRSESC---- 258 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~----~~~~Ll~~g~din~----~d~~g~t~L~~A~~~~---~~~~i~~~Ll~~ga~in~~~---- 258 (585)
|+|++++|+..++.+ ++++|+++|++++. +|..|+||||+|+. . ++.+++++|+++|++++...
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~-~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVL-NLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHH-TCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHH-ccccchHHHHHHHHhcCCcccchhhhcc
Confidence 789999999999886 77888889999999 89999999999998 7 89999999999999877411
Q ss_pred ----CCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCC-------------CchHHHHHHHcCCHHHHHHHHh---
Q 007923 259 ----GFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLD-------------DAHALHYAVAYCDAKTTTELLD--- 314 (585)
Q Consensus 259 ----~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~-------------g~tpLh~A~~~g~~~~v~~LL~--- 314 (585)
.+|..|+||||+|+..|+.++|++|+++|+ .|.. |+||||+|+..|+.+++++||+
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 134789999999999999999999999993 3343 9999999999999999999999
Q ss_pred hCCCCcccCCCCCChHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 315 LGLADVNHRNSRGYTVLHVAAM--RKEPK-------IIVSLLTKGARP-------SDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 315 ~~~advn~~d~~G~TpLh~Aa~--~g~~~-------iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
.| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..++...+..
T Consensus 161 ~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 161 QP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp CC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 66 9999999999999999999 88888 999999999999 9999999999999999988776654
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.3e-32 Score=270.64 Aligned_cols=208 Identities=18% Similarity=0.123 Sum_probs=160.6
Q ss_pred cCCCccccCCCChhHHhhhcccCCHHHHHHHHHH----cCCCCCCCC-CCCCCCChHHHHHHhC---CCHHHHHHHHhCC
Q 007923 216 RCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVE----LSLHRSESC-GFPDKHTKRIHRALDS---DDVELVRMLLKEA 287 (585)
Q Consensus 216 ~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~----~ga~in~~~-~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g 287 (585)
.++..+..|..|.||||+|+. .++.++++.|++ .+++++... ..|..|+||||+|+.. |+.++|++|++.|
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g 80 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVA-QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA 80 (273)
T ss_dssp ---------CCCHHHHHHHHH-TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH
T ss_pred CcccCCCCCcccchHHHHHHH-cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh
Confidence 466777889999999999999 788888777776 566665210 0478999999999987 9999999999986
Q ss_pred C---------------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCC--------------CCChHHHHHHHcC
Q 007923 288 H---------------TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNS--------------RGYTVLHVAAMRK 338 (585)
Q Consensus 288 ~---------------~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~--------------~G~TpLh~Aa~~g 338 (585)
+ .|..|+||||+|+..|+.+++++||+.| +++|.++. .|+||||+|+..|
T Consensus 81 a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 81 RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcC
Confidence 2 3468999999999999999999999997 99999997 7999999999999
Q ss_pred CHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCC-------cccC
Q 007923 339 EPKIIVSLLT---KGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDP-------LLRE 408 (585)
Q Consensus 339 ~~~iv~~Ll~---~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~-------~~~~ 408 (585)
+.+++++|++ +|++++.+|.+|+||||+|+..++...-+. ......+..|++.++++|. +|..
T Consensus 160 ~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~-------~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~ 232 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNT-------KFVTSMYNEILILGAKLHPTLKLEEITNRK 232 (273)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHH-------HHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred CHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHH-------HHHHHHHHHHHHhhhhcccccccccccCCC
Confidence 9999999999 999999999999999999999876421110 0001122246888999874 8999
Q ss_pred CCCHHHHHHhhhhhHHHHHHhhhh
Q 007923 409 ASHSFAMAGDDLRMKLLYLENRVG 432 (585)
Q Consensus 409 g~t~Lh~A~~~~~~~~l~l~~~~~ 432 (585)
|.||||+|+..++.+++.++-..+
T Consensus 233 g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 233 GLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHhChHHHHHHHHHCC
Confidence 999999999855555544443333
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.4e-31 Score=261.14 Aligned_cols=190 Identities=16% Similarity=0.129 Sum_probs=167.1
Q ss_pred hhhhHHHHHHhcChhH----HHHHHHhhcccccccc----ccCChHHHHHH---HHhhHHHHHHHHhcCCC---------
Q 007923 160 FMVEVLYVSFAFQVPE----LVALYQRHLLDILDKV----VADDILVVLSV---AHMCGKACEKLLERCIE--------- 219 (585)
Q Consensus 160 f~~t~L~~A~~~~~~e----lv~~ll~~g~~~~~~~----~~~~t~l~l~~---a~~~~~~~~~Ll~~g~d--------- 219 (585)
|..|+||.|+..|..+ ++++|++.|.+++..+ ..|.|||++|+ ..++.+++++|+++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 4478999999999999 5666666999998776 66999999888 45899999999998855
Q ss_pred --ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCC--------------CCCChHHHHHHhCCCHHHHHHH
Q 007923 220 --ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFP--------------DKHTKRIHRALDSDDVELVRML 283 (585)
Q Consensus 220 --in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d--------------~~g~t~Lh~A~~~g~~~~v~~L 283 (585)
++..|..|+||||+|+. .++.+++++|+++|++++. ++ ..|+||||+|+..|+.++|++|
T Consensus 84 ~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIE-RRCKHYVELLVEKGADVHA---QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp CCBCCSSEESBCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred ccccccccCCCCHHHHHHH-cCCHHHHHHHHhCCCCcCc---cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 44455689999999999 7999999999999999999 67 6899999999999999999999
Q ss_pred Hh---CCC----CCCCCchHHHHHHHcCC---------HHHHHHHHhhCCCCc-------ccCCCCCChHHHHHHHcCCH
Q 007923 284 LK---EAH----TNLDDAHALHYAVAYCD---------AKTTTELLDLGLADV-------NHRNSRGYTVLHVAAMRKEP 340 (585)
Q Consensus 284 l~---~g~----~d~~g~tpLh~A~~~g~---------~~~v~~LL~~~~adv-------n~~d~~G~TpLh~Aa~~g~~ 340 (585)
++ .|+ .|..|+||||+|+..|+ .+++++|++.| +++ +.+|..|+||||+|+..|+.
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 99 773 67889999999999888 78999999998 998 77999999999999999999
Q ss_pred HHHHHHHHcCCCCC
Q 007923 341 KIIVSLLTKGARPS 354 (585)
Q Consensus 341 ~iv~~Ll~~gad~~ 354 (585)
+++++||++|++..
T Consensus 239 ~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 239 GIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999998643
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.1e-30 Score=258.14 Aligned_cols=182 Identities=19% Similarity=0.178 Sum_probs=160.9
Q ss_pred ccCChHHHHHHHHhhHH----HHHHHHhcCCCccccC----CCChhHHhhhc---ccCCHHHHHHHHHHcCCC-------
Q 007923 192 VADDILVVLSVAHMCGK----ACEKLLERCIEITVKS----DIDIVTLDKTL---PQHIVKQIIDLRVELSLH------- 253 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~----~~~~Ll~~g~din~~d----~~g~t~L~~A~---~~~~~~~i~~~Ll~~ga~------- 253 (585)
..++++++.|+..++.+ ++++|+++|++++..+ ..|.||||+|+ . .++.+++++|++.|++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLS-AGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCB-TTBCTHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhh-cCCHHHHHHHHHhcccccchHhh
Confidence 45788999999999888 5566666999999877 67999999998 5 6999999999999854
Q ss_pred ----CCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CC--------------CCCchHHHHHHHcCCHHHHHH
Q 007923 254 ----RSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TN--------------LDDAHALHYAVAYCDAKTTTE 311 (585)
Q Consensus 254 ----in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d--------------~~g~tpLh~A~~~g~~~~v~~ 311 (585)
++. .|..|+||||+|+..|+.++|++|+++|+ .+ ..|+||||+|+..|+.+++++
T Consensus 82 ~~~~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 82 INSPFRD---VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HTCCBCC---SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hcccccc---cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 333 56689999999999999999999999993 33 469999999999999999999
Q ss_pred HHh---hCCCCcccCCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCC-------CCCCCCCCCHHHHHHHcCC
Q 007923 312 LLD---LGLADVNHRNSRGYTVLHVAAMRKE---------PKIIVSLLTKGARP-------SDLTLDGRKALQISKRLTK 372 (585)
Q Consensus 312 LL~---~~~advn~~d~~G~TpLh~Aa~~g~---------~~iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~~~ 372 (585)
||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|+++ +.+|..|+||||+|++.|+
T Consensus 159 Ll~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 159 LTENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccC-CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 999 66 9999999999999999999888 79999999999998 6799999999999999988
Q ss_pred CCcccc
Q 007923 373 AADYYI 378 (585)
Q Consensus 373 ~~~~~~ 378 (585)
...+..
T Consensus 238 ~~~v~~ 243 (260)
T 3jxi_A 238 IGIFQH 243 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=8.2e-30 Score=254.86 Aligned_cols=186 Identities=16% Similarity=0.092 Sum_probs=150.5
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccc--cccccccCChHHHHHHHHhhHHHHHHHHhcCC-CccccCCCChhHHhhhcc--
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLD--ILDKVVADDILVVLSVAHMCGKACEKLLERCI-EITVKSDIDIVTLDKTLP-- 236 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~--~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~-din~~d~~g~t~L~~A~~-- 236 (585)
.+++|.|+..+..+.++.+++.+.+ ++.+|..|.||+++|+..++.+++++|+++|+ +++.++..|.||||+|+.
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 4566777778888888888777666 77788888888888888888888888888887 888888888888888882
Q ss_pred --cCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHH
Q 007923 237 --QHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTT 310 (585)
Q Consensus 237 --~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~ 310 (585)
..+..+++++|++.|++++. .+..|+||||+|+..|+.++|++|++.|+ .|..|+||||+|+..|+.++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~~---~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINAK---ASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTCC---CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCccc---cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 14677888888888887777 77788888888888888888888888883 5677888888888888888888
Q ss_pred HHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 007923 311 ELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG 350 (585)
Q Consensus 311 ~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 350 (585)
+||+..|+++|.+|..|+||||+|+..|+.+++++|++++
T Consensus 234 ~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 234 LLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 8888444888888888888888888888888888888764
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3.9e-30 Score=257.20 Aligned_cols=179 Identities=17% Similarity=0.142 Sum_probs=165.3
Q ss_pred ChHHHHHHHHhhHHHHHHHHhcCCC--ccccCCCChhHHhhhcccCCHHHHHHHHHHcCC-CCCCCCCCCCCCChHHHHH
Q 007923 195 DILVVLSVAHMCGKACEKLLERCIE--ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSL-HRSESCGFPDKHTKRIHRA 271 (585)
Q Consensus 195 ~t~l~l~~a~~~~~~~~~Ll~~g~d--in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga-~in~~~~~d~~g~t~Lh~A 271 (585)
.++++.++..++.+.++.+++.+.+ +|.+|..|+||||+|+. .++.+++++|++.|+ +++. .+..|+||||+|
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~-~g~~~~v~~Ll~~g~~~~~~---~~~~g~tpL~~a 152 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVS-HANFPVVQQLLDSGVCKVDK---QNRAGYSPIMLT 152 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTSCCCTTC---CCTTSCCHHHHG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHH-CCCHHHHHHHHHCCCCcCCC---CCCCCCCHHHHH
Confidence 4456788888899999999988777 99999999999999999 799999999999998 9999 899999999999
Q ss_pred H-----hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHH
Q 007923 272 L-----DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKI 342 (585)
Q Consensus 272 ~-----~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~i 342 (585)
+ ..++.+++++|++.|+ .|..|+||||+|+..|+.++|++||+.| +++|.+|..|+||||+|+..|+.++
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~i 231 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHGHKEI 231 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 9 6689999999999994 4577999999999999999999999997 9999999999999999999999999
Q ss_pred HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 343 IVSLLT-KGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 343 v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+++|++ +|++++.+|.+|+||||+|+..++...+..
T Consensus 232 v~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 232 AGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASM 268 (276)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999 899999999999999999999887665543
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.6e-29 Score=233.76 Aligned_cols=165 Identities=15% Similarity=0.119 Sum_probs=148.5
Q ss_pred CChHHHHHHHHhhHHHHHHHHhcCCC-ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 194 DDILVVLSVAHMCGKACEKLLERCIE-ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~~~~~Ll~~g~d-in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
+.++++.|+..++.+++++|++.|.+ ++.+|..|+||||+|+. .++.+++++|+++|++++. ++..|.||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASA-FGEIETVRFLLEWGADPHI---LAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHH-TTCHHHHHHHHHHTCCTTC---CCTTCCCHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCchh---hcccCCCHHHHHH
Confidence 45789999999999999999999887 89999999999999999 7999999999999999999 8999999999999
Q ss_pred hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923 273 DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT 348 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~ 348 (585)
..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 9999999999999983 5678999999999999999999999997 9999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCH
Q 007923 349 KGARPSDLTLDGRKA 363 (585)
Q Consensus 349 ~gad~~~~d~~G~Tp 363 (585)
+|+++...+..|.||
T Consensus 157 ~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHSCC-------
T ss_pred HHHHHhcccCCCCCC
Confidence 999999999999887
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=9.9e-29 Score=225.79 Aligned_cols=154 Identities=16% Similarity=0.105 Sum_probs=142.9
Q ss_pred cCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 193 ADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 193 ~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
...++++.|+..++.+++++|+++|++++.++..|+||||+|+. ++.+++++|+++|++++. ++..|+||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL--GNPEIARRLLLRGANPDL---KDRTGFAVIHDAA 78 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS--SCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc--CcHHHHHHHHHcCCCCCC---CCCCCCCHHHHHH
Confidence 45688999999999999999999999999999999999999887 889999999999999999 8999999999999
Q ss_pred hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCC-cccCCCCCChHHHHHHHcCCHHHHHHHH
Q 007923 273 DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLAD-VNHRNSRGYTVLHVAAMRKEPKIIVSLL 347 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ad-vn~~d~~G~TpLh~Aa~~g~~~iv~~Ll 347 (585)
..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.+ ++ ++.+|..|+||||+|+..|+.+++++|+
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999999983 5788999999999999999999999998 66 7999999999999999999999999999
Q ss_pred HcCCC
Q 007923 348 TKGAR 352 (585)
Q Consensus 348 ~~gad 352 (585)
++|||
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 99986
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=4.3e-29 Score=235.26 Aligned_cols=159 Identities=16% Similarity=0.106 Sum_probs=133.7
Q ss_pred cccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCCh
Q 007923 187 ILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTK 266 (585)
Q Consensus 187 ~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t 266 (585)
++.++..|.||+++|+..++.+++++|+++|++++.++..|.||||+|+. .++.+++++|+++|++++. +|..|.|
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVK-NNRLGIAEKLLSKGSNVNT---KDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHHTCCTTC---CCTTSCC
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHH-cCCHHHHHHHHHCCCCCCC---CCCCCCc
Confidence 45677888888888888888888888888888888888888888888888 6888888888888888888 7888888
Q ss_pred HHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHH
Q 007923 267 RIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKI 342 (585)
Q Consensus 267 ~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~i 342 (585)
|||+|+..|+.+++++|+++|. .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 8888888888888888888883 5677888888888888888888888876 8888888888888888888888888
Q ss_pred HHHHHHcC
Q 007923 343 IVSLLTKG 350 (585)
Q Consensus 343 v~~Ll~~g 350 (585)
+++|+++|
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 88888764
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.7e-29 Score=236.61 Aligned_cols=153 Identities=20% Similarity=0.192 Sum_probs=144.8
Q ss_pred ccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCch
Q 007923 220 ITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAH 295 (585)
Q Consensus 220 in~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~t 295 (585)
+|.+|..|+||||+|+. .+..+++++|++.|++++. ++..|+||||+|+..|+.+++++|++.|. .|..|+|
T Consensus 28 ~n~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACM-LGMENAIDKLVENFDKLED---KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHH-HTCGGGHHHHHHHHCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred HhCcCCCCCCHHHHHHH-cCCHHHHHHHHHhcccccc---ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 57789999999999999 7999999999999999999 89999999999999999999999999983 5688999
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCc
Q 007923 296 ALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAAD 375 (585)
Q Consensus 296 pLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~ 375 (585)
|||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 999999999999999999997 9999999999999999999999999999999999999999999999999999887665
Q ss_pred cc
Q 007923 376 YY 377 (585)
Q Consensus 376 ~~ 377 (585)
+.
T Consensus 183 v~ 184 (192)
T 2rfm_A 183 IK 184 (192)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=6.9e-29 Score=229.45 Aligned_cols=165 Identities=16% Similarity=0.086 Sum_probs=146.1
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCCC-CCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSLH-RSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAV 301 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~-in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~ 301 (585)
+.||||.|+. .+..++++.|++.|.+ ++. ++..|+||||+|+..|+.++|++|+++|. .|..|+||||+|+
T Consensus 2 ~~~~L~~A~~-~g~~~~v~~ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAA-QGELDQLKEHLRKGDNLVNK---PDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHH-TTCHHHHHHHHTTCSGGGGC---CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred chhhHHHHHH-cCCHHHHHHHHHcCcccccC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHH
Confidence 5789999999 7999999999999987 787 89999999999999999999999999983 5688999999999
Q ss_pred HcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCc
Q 007923 302 AYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTE 381 (585)
Q Consensus 302 ~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ 381 (585)
..|+.+++++|++.+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++...+..
T Consensus 78 ~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~--- 153 (172)
T 3v30_A 78 TGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV--- 153 (172)
T ss_dssp HTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH---
T ss_pred HCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHH---
Confidence 999999999999997 9999999999999999999999999999999999999999999999999999887665544
Q ss_pred CCCCCcccchHHHHHHhhhhcCCcccCCCCH
Q 007923 382 EGKTTPKDRLCIEILEQAERRDPLLREASHS 412 (585)
Q Consensus 382 ~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~ 412 (585)
|++.+.+....+..|.||
T Consensus 154 -------------L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 154 -------------IENHILKLFQSNLVPADP 171 (172)
T ss_dssp -------------HHHHHHHHSCC-------
T ss_pred -------------HHHHHHHHhcccCCCCCC
Confidence 788888888888888876
No 62
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.9e-31 Score=257.89 Aligned_cols=154 Identities=14% Similarity=0.065 Sum_probs=121.2
Q ss_pred HHHHHhcCCCcccc---CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhC
Q 007923 210 CEKLLERCIEITVK---SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKE 286 (585)
Q Consensus 210 ~~~Ll~~g~din~~---d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 286 (585)
++.|+++|++++.. +..|.||||+|+. .+..+++++|++.|++++. +|..|+||||+|+..|+.++|++|++.
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAAL-TGELEVVQQAVKEMNDPSQ---PNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHH-HTCHHHHHHHHHHSSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHH-cCCHHHHHHHHhcCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 35677888876654 3457788888888 6888888888888888888 788888888888888888888888888
Q ss_pred CC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCC-CCCChHHHHH--HHcCCHHHHHHHHHcCCCCCCCCCC
Q 007923 287 AH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRN-SRGYTVLHVA--AMRKEPKIIVSLLTKGARPSDLTLD 359 (585)
Q Consensus 287 g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~A--a~~g~~~iv~~Ll~~gad~~~~d~~ 359 (585)
|+ .|..|+||||+|+..|+.+++++||+.| ++++.++ ..|+||||+| +..|+.+++++|+++|++++.+|..
T Consensus 77 ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~ 155 (229)
T 2vge_A 77 GANVNSPDSHGWTPLHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSG 155 (229)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGG
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCC
Confidence 83 5677888888888888888888888887 8888886 5888888888 8888888888888888888888888
Q ss_pred CCCHHHHHH
Q 007923 360 GRKALQISK 368 (585)
Q Consensus 360 G~TpL~~A~ 368 (585)
|.||++.++
T Consensus 156 ~~~~l~~~~ 164 (229)
T 2vge_A 156 AVYALWDYS 164 (229)
T ss_dssp EEEESSCBC
T ss_pred chHHHHHHh
Confidence 888887543
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.2e-28 Score=223.75 Aligned_cols=154 Identities=14% Similarity=0.147 Sum_probs=125.6
Q ss_pred ccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHH
Q 007923 192 VADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRA 271 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A 271 (585)
..+.++++.|+..++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++. +|..|.||||+|
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A 87 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAF-NGHLEIVEVLLKNGADVNA---VDHAGMTPLRLA 87 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc---cCCCCCCHHHHH
Confidence 345667778888888888888888888888888888888888888 6788888888888888888 788888888888
Q ss_pred HhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q 007923 272 LDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLL 347 (585)
Q Consensus 272 ~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll 347 (585)
+..|+.+++++|+++|. .|..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 88888888888888873 5567888888888888888888888876 888888888888888888888888888888
Q ss_pred HcC
Q 007923 348 TKG 350 (585)
Q Consensus 348 ~~g 350 (585)
++|
T Consensus 167 ~~G 169 (169)
T 2y1l_E 167 KLN 169 (169)
T ss_dssp TC-
T ss_pred HcC
Confidence 776
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.5e-28 Score=224.48 Aligned_cols=143 Identities=20% Similarity=0.196 Sum_probs=81.4
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVA 302 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~ 302 (585)
|.||||.|+. .+..+++++|++.|++++. +|..|+||||+|+..|+.+++++|++.|. .|..|.||||+|+.
T Consensus 3 ~~t~L~~A~~-~g~~~~v~~ll~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 3 NSLSVHQLAA-QGEMLYLATRIEQENVINH---TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TCCCHHHHHH-TTCHHHHHHHHHHSSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CcchHHHHHH-CCCHHHHHHHHHcCCCcCC---CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 4555555555 4555555555555555555 55555555555555555555555555552 34455555555555
Q ss_pred cCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923 303 YCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA 374 (585)
Q Consensus 303 ~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 374 (585)
.|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++..
T Consensus 79 ~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 79 KGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp HTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred cCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 55555555555554 555555555555555555555555555555555555555555555555555554443
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.9e-28 Score=224.14 Aligned_cols=157 Identities=16% Similarity=0.115 Sum_probs=148.6
Q ss_pred cCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 193 ADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 193 ~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
.|.||++.|+..++.+++++|++.|++++.+|..|.||||+|+. .++.+++++|+++|++++. ++..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAA-HGQIAVVEFLLQNGADPQL---LGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHH-CCCHHHHHHHHHcCCCCCC---cCCCCCcHHHHHH
Confidence 47899999999999999999999999999999999999999999 7999999999999999999 8999999999999
Q ss_pred hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923 273 DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT 348 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~ 348 (585)
..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 9999999999999983 6688999999999999999999999987 9999999999999999999999999999999
Q ss_pred cCCCCC
Q 007923 349 KGARPS 354 (585)
Q Consensus 349 ~gad~~ 354 (585)
+++++.
T Consensus 157 ~~~~~~ 162 (167)
T 3v31_A 157 HLLKLL 162 (167)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 987543
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=5.3e-28 Score=223.05 Aligned_cols=150 Identities=23% Similarity=0.168 Sum_probs=139.7
Q ss_pred CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHH
Q 007923 224 SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHY 299 (585)
Q Consensus 224 d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~ 299 (585)
...+.|+|+.|+. .++.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|. .|..|+||||+
T Consensus 11 ~~~~~~~l~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 11 GSDLGKKLLEAAR-AGRDDEVRILMANGADVNA---EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRL 86 (169)
T ss_dssp --CHHHHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcccchHHHHHH-cCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 3457899999999 7999999999999999999 89999999999999999999999999983 56789999999
Q ss_pred HHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 300 AVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 300 A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..
T Consensus 87 A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp HHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 99999999999999998 9999999999999999999999999999999999999999999999999999877655443
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=4.6e-30 Score=249.40 Aligned_cols=201 Identities=18% Similarity=0.124 Sum_probs=159.2
Q ss_pred HHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCC
Q 007923 244 IDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLAD 319 (585)
Q Consensus 244 ~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~ad 319 (585)
++.|++.|++++.....+..|.||||+|+..|+.++|++|++.|. .|..|+||||+|+..|+.+++++||+.| ++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-AN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CC
Confidence 467889999988755456778899999999999999999999983 5688999999999999999999999997 99
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHH--HHcCCCCcccccCcCCCCCcccchHHHHH
Q 007923 320 VNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLT-LDGRKALQIS--KRLTKAADYYIPTEEGKTTPKDRLCIEIL 396 (585)
Q Consensus 320 vn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d-~~G~TpL~~A--~~~~~~~~~~~~~~~g~t~~~~~~~~~ll 396 (585)
+|.+|..|+||||+|+..|+.+++++|+++|++++.++ .+|+||||+| +..++...+. .|+
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~----------------~Ll 143 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCAT----------------YLA 143 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH----------------HHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHH----------------HHH
Confidence 99999999999999999999999999999999999997 6999999999 6655544433 378
Q ss_pred HhhhhcCCcccCCCCHHHHHHhhhhhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCcccccccc
Q 007923 397 EQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGI 462 (585)
Q Consensus 397 ~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~ 462 (585)
+.+++++.++..|.||++.++.....+++ +.....+.....|..|+||||+|+..|+.+++.-..
T Consensus 144 ~~ga~~~~~~~~~~~~l~~~~~~~~~~~l-l~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 144 DVEQSMGLMNSGAVYALWDYSAEFGDELS-FREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HHHHHTTTSGGGEEEESSCBCCSSTTBCC-BCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HcCCCcccccCCchHHHHHHhhccccccC-ccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 89999999999999999976653222111 011111223447888999999999999999987543
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=6.9e-28 Score=224.42 Aligned_cols=163 Identities=13% Similarity=0.083 Sum_probs=150.8
Q ss_pred cCChHHHHHHHHhhHHHHHHHHhc-CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHH
Q 007923 193 ADDILVVLSVAHMCGKACEKLLER-CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRA 271 (585)
Q Consensus 193 ~~~t~l~l~~a~~~~~~~~~Ll~~-g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A 271 (585)
.+.++++.|+..++.+++++|+++ +.+++.++..|+||||+|+. .++.+++++|+++|++++. +|..|+||||+|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A 79 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACR-EGRSAVVEMLIMRGARINV---MNRGDDTPLHLA 79 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHH-cCcHHHHHHHHHcCCCCCC---cCCCCCCHHHHH
Confidence 456788999999999999999998 77899999999999999999 7999999999999999999 899999999999
Q ss_pred HhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q 007923 272 LDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLL 347 (585)
Q Consensus 272 ~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll 347 (585)
+..|+.+++++|+++|. .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++.+++++|+
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999993 6788999999999999999999999998 999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCC
Q 007923 348 TKGARPSDLTLDG 360 (585)
Q Consensus 348 ~~gad~~~~d~~G 360 (585)
++|++++..+..+
T Consensus 159 ~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 159 KMGQNLNRIPYKD 171 (179)
T ss_dssp HTTCCCSCBCCCC
T ss_pred HhhcCcccCCccc
Confidence 9999999877654
No 69
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5e-28 Score=221.13 Aligned_cols=148 Identities=16% Similarity=0.102 Sum_probs=137.6
Q ss_pred CCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHH
Q 007923 225 DIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYA 300 (585)
Q Consensus 225 ~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A 300 (585)
....||||.|+. .++.+++++|+++|++++. ++..|+||||+|+. |+.+++++|++.|. .|..|+||||+|
T Consensus 3 ~~~~~~L~~A~~-~g~~~~v~~Ll~~~~~~~~---~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 3 EPWGNELASAAA-RGDLEQLTSLLQNNVNVNA---QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDA 77 (162)
T ss_dssp --CHHHHHHHHH-HTCHHHHHHHTTSCCCTTC---CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred chHhhHHHHHHH-cCCHHHHHHHHhCCCCccc---cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 347899999999 7999999999999999999 89999999999999 99999999999993 567899999999
Q ss_pred HHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 301 VAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR-PSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 301 ~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++...+..
T Consensus 78 ~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155 (162)
T ss_dssp HHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 9999999999999988 99999999999999999999999999999999998 69999999999999999887665544
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.2e-27 Score=215.07 Aligned_cols=142 Identities=20% Similarity=0.125 Sum_probs=112.1
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVA 302 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~ 302 (585)
..||||.|+. .+..+++++|++.|++++. +..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~-~g~~~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAAR-AGQDDEVRILMANGAPFTT----DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHTCCCCC----CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHH-cCCHHHHHHHHHcCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 4577888887 6778888888888877654 7778888888888888888888887772 45677888888888
Q ss_pred cCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCC
Q 007923 303 YCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAA 374 (585)
Q Consensus 303 ~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 374 (585)
.|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++..
T Consensus 77 ~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 77 EGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp HTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 88888888888776 888888888888888888888888888888888888888888888888888776544
No 71
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=6.6e-30 Score=265.71 Aligned_cols=191 Identities=11% Similarity=0.033 Sum_probs=159.2
Q ss_pred hhHHHHHHh-cChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCc---cccCCCChhHHhhhccc
Q 007923 162 VEVLYVSFA-FQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEI---TVKSDIDIVTLDKTLPQ 237 (585)
Q Consensus 162 ~t~L~~A~~-~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~di---n~~d~~g~t~L~~A~~~ 237 (585)
.+++++|.. ++.++++++++++|.+. +||+++|+..|+.+++++|+++|+.. +..+..|.||||+|+.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~- 137 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE- 137 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH-
Confidence 567888776 68889999999987764 49999999999999999999999832 2344568999999999
Q ss_pred CCHHHHHHHHHHcCCCC---CCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-C-----CCCCCchHHHHHH-HcCCHH
Q 007923 238 HIVKQIIDLRVELSLHR---SESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-H-----TNLDDAHALHYAV-AYCDAK 307 (585)
Q Consensus 238 ~~~~~i~~~Ll~~ga~i---n~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~-----~d~~g~tpLh~A~-~~g~~~ 307 (585)
.|+.+++++|+++|+++ +. .+.. +||||+|+..|+.++|++|+++| + +|..|+||||+|+ ..|+.+
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i---~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMI---QAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHH---SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred cCCHHHHHHHHhCCCCcccccc---CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 89999999999999863 32 2222 99999999999999999999999 4 5667999999999 999999
Q ss_pred HHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcc
Q 007923 308 TTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADY 376 (585)
Q Consensus 308 ~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~ 376 (585)
+|++|++.| + .|.||||+|+.+|+.+++++|+++|++++..+ ++++.|+..|+...+
T Consensus 214 iv~~Ll~~g-a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 214 VINFLLDCP-V-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp HHHHHTTSH-H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCS
T ss_pred HHHHHHhCC-C-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhh
Confidence 999999865 3 28999999999999999999999999887655 467778877776644
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.4e-27 Score=213.04 Aligned_cols=147 Identities=14% Similarity=0.129 Sum_probs=133.7
Q ss_pred CChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHh
Q 007923 194 DDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALD 273 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~ 273 (585)
..++++.|+..++.+++++|+++|++++ .+..|.||||+|+. .++.+++++|+++|++++. ++..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQ-YGHFSTTEVLLRAGVSRDA---RTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHH-HTCHHHHHHHHTTTCCTTC---CCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC---CCCCCCCHHHHHHH
Confidence 3577888888889999999999998876 57789999999999 6889999999999999998 88999999999999
Q ss_pred CCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q 007923 274 SDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSL 346 (585)
Q Consensus 274 ~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 346 (585)
.|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999983 5678999999999999999999999997 99999999999999999999999999987
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=4.4e-28 Score=236.93 Aligned_cols=161 Identities=18% Similarity=0.151 Sum_probs=113.2
Q ss_pred CCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHH
Q 007923 225 DIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYA 300 (585)
Q Consensus 225 ~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A 300 (585)
..|.||||.|+. .+..++++.|+++|++++. +..|.||||+|+..|+.++|++|++.|+ .|..|+||||+|
T Consensus 3 ~~g~t~L~~a~~-~~~~~~~~~ll~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 3 ITGQVSLPPGKR-TNLRKTGSERIAHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHH
T ss_pred ccccccCchhhh-hhhHHHHHHHhccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 468999999999 7999999999999999987 5789999999999999999999999983 568899999999
Q ss_pred HHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHH--HHcCCCCccc
Q 007923 301 VAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGR-KALQIS--KRLTKAADYY 377 (585)
Q Consensus 301 ~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~-TpL~~A--~~~~~~~~~~ 377 (585)
+..|+.+++++||+.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..++...+.
T Consensus 78 ~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 9999999999999997 99999999999999999999999999999999999999998887 999998 5555555443
Q ss_pred ccCcCCCCCcccchHHHHHHhhhhcCCccc
Q 007923 378 IPTEEGKTTPKDRLCIEILEQAERRDPLLR 407 (585)
Q Consensus 378 ~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~ 407 (585)
. |++.+++++..+.
T Consensus 157 ~----------------Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 157 F----------------LYGVQEKMGIMNK 170 (239)
T ss_dssp H----------------HHHHHHHTTTTGG
T ss_pred H----------------HHHhhhccccccc
Confidence 3 7788888776543
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=2.1e-27 Score=217.85 Aligned_cols=155 Identities=17% Similarity=0.103 Sum_probs=125.0
Q ss_pred cccCChHHHHHHHHhhHHHHHHHHh-cCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHH
Q 007923 191 VVADDILVVLSVAHMCGKACEKLLE-RCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIH 269 (585)
Q Consensus 191 ~~~~~t~l~l~~a~~~~~~~~~Ll~-~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh 269 (585)
+..+.++++.|+..++.+++++|++ .+.+++..+..|.||||+|+. .++.+++++|+++|++++. +|..|+||||
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~ 80 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAG-YNRVSVVEYLLQHGADVHA---KDKGGLVPLH 80 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHH-cChHHHHHHHHhcCCCCCc---cCCCCCCHHH
Confidence 4566778888888888888888887 456777777888888888888 6888888888888888888 7888888888
Q ss_pred HHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHH
Q 007923 270 RALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVS 345 (585)
Q Consensus 270 ~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 345 (585)
+|+..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+. |+.+++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~i~~~ 158 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTDIQDL 158 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHHHHHH
T ss_pred HHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChHHHHH
Confidence 8888888888888888873 5577888888888888888888888876 8888888888888888665 88888888
Q ss_pred HHHcCC
Q 007923 346 LLTKGA 351 (585)
Q Consensus 346 Ll~~ga 351 (585)
|+++||
T Consensus 159 L~~~gA 164 (165)
T 3twr_A 159 LRGDAA 164 (165)
T ss_dssp HHTC--
T ss_pred Hhhccc
Confidence 888876
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.1e-26 Score=210.81 Aligned_cols=149 Identities=16% Similarity=0.136 Sum_probs=133.9
Q ss_pred CChHHHHHHHHhhHHHHHHHHhc-CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHH
Q 007923 194 DDILVVLSVAHMCGKACEKLLER-CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRAL 272 (585)
Q Consensus 194 ~~t~l~l~~a~~~~~~~~~Ll~~-g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~ 272 (585)
+.++++.|+..++.+++++|+++ +.+++.++..|.||||+ +. .++.+++++|+++|++++. +|..|.||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MM-FGSTAIALELLKQGASPNV---QDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SC-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HH-cCCHHHHHHHHHCCCCCCC---cCCCCCCHHHHHH
Confidence 45788899999999999999988 45899999999999999 77 6889999999999999998 8999999999999
Q ss_pred hCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 007923 273 DSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLT 348 (585)
Q Consensus 273 ~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~ 348 (585)
..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++. ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 77 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 9999999999999983 567899999999999999999999977 8999999999999999999999999999987
Q ss_pred c
Q 007923 349 K 349 (585)
Q Consensus 349 ~ 349 (585)
+
T Consensus 155 ~ 155 (156)
T 1bd8_A 155 H 155 (156)
T ss_dssp T
T ss_pred h
Confidence 5
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.3e-27 Score=222.58 Aligned_cols=164 Identities=17% Similarity=0.124 Sum_probs=143.5
Q ss_pred CCChhHHhhhcccCCHHHHHHHHHHc-CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHH
Q 007923 225 DIDIVTLDKTLPQHIVKQIIDLRVEL-SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHY 299 (585)
Q Consensus 225 ~~g~t~L~~A~~~~~~~~i~~~Ll~~-ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~ 299 (585)
..+.++||.|+. .++.+++++|++. +.+++. ++..|+||||+|+..|+.+++++|++.|. .|..|+||||+
T Consensus 3 ~~~~~~l~~A~~-~g~~~~v~~ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCR-EGNAVAVRLWLDNTENDLNQ---GDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHH-HTCHHHHHHHHHCTTSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHhcCcccccc---cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 357899999999 7999999999998 678888 89999999999999999999999999993 56889999999
Q ss_pred HHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCccccc
Q 007923 300 AVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIP 379 (585)
Q Consensus 300 A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~ 379 (585)
|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+.
T Consensus 79 A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~-- 155 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRE-- 155 (179)
T ss_dssp HHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHH--
T ss_pred HHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHH--
Confidence 99999999999999998 999999999999999999999999999999999999999999999999998764443332
Q ss_pred CcCCCCCcccchHHHHHHhhhhcCCcccCC
Q 007923 380 TEEGKTTPKDRLCIEILEQAERRDPLLREA 409 (585)
Q Consensus 380 ~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g 409 (585)
.+++.+++++..+..+
T Consensus 156 --------------~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 156 --------------RAEKMGQNLNRIPYKD 171 (179)
T ss_dssp --------------HHHHTTCCCSCBCCCC
T ss_pred --------------HHHHhhcCcccCCccc
Confidence 2566777777665543
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.2e-28 Score=239.14 Aligned_cols=175 Identities=11% Similarity=0.064 Sum_probs=129.2
Q ss_pred ccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHH
Q 007923 192 VADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRA 271 (585)
Q Consensus 192 ~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A 271 (585)
..|.||++.++..+..++++.|+++|++++.. ..|.||||.|+. .++.+++++|++.|+++|. +|..|+||||+|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~d~~g~t~L~~A 77 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSL-EGEFDLVQRIIYEVDDPSL---PNDEGITALHNA 77 (239)
T ss_dssp -----------------------------------CHHHHHHHHH-HTCHHHHHHHTSTTSSCCC---CCTTSCCHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHH-cCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHH
Confidence 45889999999999999999999999999865 679999999999 7999999999999999999 899999999999
Q ss_pred HhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCC-hHHHHH--HHcCCHHHHH
Q 007923 272 LDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGY-TVLHVA--AMRKEPKIIV 344 (585)
Q Consensus 272 ~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~-TpLh~A--a~~g~~~iv~ 344 (585)
+..|+.++|++|+++|+ .|..|+||||+|+..|+.+++++|++.| ++++.++..|. ||||+| +..|+.++++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 99999999999999983 6788999999999999999999999998 99999998887 999999 7889999999
Q ss_pred HHHHcCCCCCCC---------CCCCCCHHHHHHHcCC
Q 007923 345 SLLTKGARPSDL---------TLDGRKALQISKRLTK 372 (585)
Q Consensus 345 ~Ll~~gad~~~~---------d~~G~TpL~~A~~~~~ 372 (585)
+|+++|++++.. +..|.+|++++...|.
T Consensus 157 ~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 157 FLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999998876 5567888877766544
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.1e-27 Score=216.75 Aligned_cols=145 Identities=22% Similarity=0.241 Sum_probs=132.9
Q ss_pred cCCCChhHHhhhcccCCHHHHHHHHHH-cCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHH
Q 007923 223 KSDIDIVTLDKTLPQHIVKQIIDLRVE-LSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHAL 297 (585)
Q Consensus 223 ~d~~g~t~L~~A~~~~~~~~i~~~Ll~-~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpL 297 (585)
.|..|.||||.|+. .+..++++.|++ .+.+++. .+..|+||||+|+..|+.+++++|+++|. .|..|+|||
T Consensus 4 ~~~~~~~~l~~A~~-~g~~~~v~~ll~~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAK-AGDVETVKKLCTVQSVNCRD---IEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHH-HTCHHHHHHHCCTTTTTCCC---TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CcchhhHHHHHHHH-hCCHHHHHHHHHcCCCCccc---cccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 46679999999999 799999999998 4567777 78899999999999999999999999993 678899999
Q ss_pred HHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923 298 HYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 298 h~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
|+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+. ++.
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCH
T ss_pred HHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CCh
Confidence 9999999999999999998 9999999999999999999999999999999999999999999999999765 443
No 79
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6.1e-29 Score=258.42 Aligned_cols=255 Identities=12% Similarity=0.033 Sum_probs=185.1
Q ss_pred cChhHHHHHHHhhccccccccccCChHHHHHHH-HhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHH
Q 007923 171 FQVPELVALYQRHLLDILDKVVADDILVVLSVA-HMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVE 249 (585)
Q Consensus 171 ~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a-~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~ 249 (585)
.+..+.+..++....+++.. .+.++++++.. .+..+++++|+++|++. .||||+|+. .|+.+++++|++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~--~~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~-~G~~e~v~~Ll~ 113 (376)
T 2aja_A 44 LSYKEAIHIFLPGTKNMEQV--RQLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAI-TGCSSALDTLCL 113 (376)
T ss_dssp SCHHHHHHHCCCCSSHHHHH--HHHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHH-HCCHHHHHHHTT
T ss_pred ccHHHHHHHHhcCCCCHHHH--HHHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHH-cCCHHHHHHHHH
Confidence 55667777777665554432 23455555544 46788999999988764 599999999 799999999999
Q ss_pred cCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccc-
Q 007923 250 LSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH------TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNH- 322 (585)
Q Consensus 250 ~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~------~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~- 322 (585)
+|+........+..|.||||+|+..|+.++|++|+++|+ ++..++||||+|+..|+.++|++|++.| ++++.
T Consensus 114 ~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~~ 192 (376)
T 2aja_A 114 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA-PTEATA 192 (376)
T ss_dssp C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSC-GGGHHH
T ss_pred cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcC-Cccchh
Confidence 998332211145678999999999999999999999993 3333499999999999999999999998 99988
Q ss_pred -CCCCCChHHHHHH-HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhh
Q 007923 323 -RNSRGYTVLHVAA-MRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAE 400 (585)
Q Consensus 323 -~d~~G~TpLh~Aa-~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~ 400 (585)
+|..|+||||+|| ..|+.++|++|+++|++ |.||||+|+..|+...+.. |++.++
T Consensus 193 ~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~l----------------L~~~ga 249 (376)
T 2aja_A 193 MIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPF----------------IARHVN 249 (376)
T ss_dssp HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHH----------------HHHHHH
T ss_pred ccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHH----------------HHhcCc
Confidence 8999999999999 99999999999998853 8999999999988776544 455555
Q ss_pred hcCCcccCCCCHHHHHHhhhhhH---------------------------HHHHHhhhhhhhhc-----CCCCCchhhHH
Q 007923 401 RRDPLLREASHSFAMAGDDLRMK---------------------------LLYLENRVGLAKLL-----FPMEAKVIMDI 448 (585)
Q Consensus 401 ~~n~~~~~g~t~Lh~A~~~~~~~---------------------------~l~l~~~~~~~~~L-----~~~~g~t~l~~ 448 (585)
+++..+ ++++.|+..++.. .+.+....+.++.+ .+..+.||||+
T Consensus 250 ~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~ 325 (376)
T 2aja_A 250 RLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRL 325 (376)
T ss_dssp HHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHH
T ss_pred cccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHH
Confidence 543322 1333333322222 11112222223333 23456788999
Q ss_pred hhhcCCccccccccc
Q 007923 449 VHLDGTLEFALDGIK 463 (585)
Q Consensus 449 A~~~~~~~~~~~l~~ 463 (585)
|+..|+.+++.++..
T Consensus 326 A~~~g~~e~v~lLl~ 340 (376)
T 2aja_A 326 ALRLGNQGACALLLS 340 (376)
T ss_dssp HHHHTCTTHHHHHTT
T ss_pred HHHcCcHHHHHHHHc
Confidence 999999999888876
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.8e-26 Score=208.18 Aligned_cols=144 Identities=15% Similarity=0.093 Sum_probs=134.2
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHc-CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVEL-SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAV 301 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~-ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~ 301 (585)
|.||||.|+. .+..+++++|++. +.+++. ++..|+||||+ +..|+.+++++|++.|. .|..|+||||+|+
T Consensus 2 ~~~~L~~A~~-~g~~~~v~~ll~~~~~~~~~---~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAA-RGDVQEVRRLLHRELVHPDA---LNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHTTCCCTTC---CCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cchHHHHHHH-hCCHHHHHHHHHhhCcCccc---cCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 6799999999 7999999999998 448888 89999999999 99999999999999993 6688999999999
Q ss_pred HcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCccc
Q 007923 302 AYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYY 377 (585)
Q Consensus 302 ~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~ 377 (585)
..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++ ++++.+|.+|+||||+|+..++...+.
T Consensus 77 ~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999999999988 99999999999999999999999999999999 999999999999999999987765443
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.6e-26 Score=205.08 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=121.5
Q ss_pred CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCC
Q 007923 217 CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLD 292 (585)
Q Consensus 217 g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~ 292 (585)
+++++.++..|.||||+|+. .+..+++++|+++|++++. +|..|+||||+|+. |+.+++++|+++|. .|..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAA-RGQVETVRQLLEAGADPNA---LNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPA 76 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTT
T ss_pred CCCccCCCCCCccHHHHHHH-cCCHHHHHHHHHcCCCcCC---cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCC
Confidence 57889999999999999999 7899999999999999999 89999999999999 99999999999983 5667
Q ss_pred -CchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 007923 293 -DAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR 352 (585)
Q Consensus 293 -g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad 352 (585)
|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 899999999999999999999988 99999999999999999999999999999999986
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.3e-26 Score=210.92 Aligned_cols=142 Identities=11% Similarity=0.020 Sum_probs=102.8
Q ss_pred cccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCch-
Q 007923 221 TVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAH- 295 (585)
Q Consensus 221 n~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~t- 295 (585)
+..+..|.||||+|+. .++.+++++|+++|++++. ++..|+||||+|+ .|+.+++++|++.|. .|..|+|
T Consensus 6 ~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~tt 80 (156)
T 1bi7_B 6 GSSMEPSADWLATAAA-RGRVEEVRALLEAGANPNA---PNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTR 80 (156)
T ss_dssp ----CCSTTHHHHHHH-HTCHHHHHHHHTTTCCTTC---CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCC
T ss_pred cCCCccchHHHHHHHH-cCCHHHHHHHHHcCCCCCC---CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 3455667788888887 5777888888888888877 7777888888774 778888888887772 5567887
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923 296 ALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISK 368 (585)
Q Consensus 296 pLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 368 (585)
|||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||.+.+.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccCC
Confidence 999999999999999999997 999999999999999999999999999999999999999999999987543
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=4.3e-25 Score=195.86 Aligned_cols=122 Identities=20% Similarity=0.114 Sum_probs=114.3
Q ss_pred CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCC
Q 007923 251 SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSR 326 (585)
Q Consensus 251 ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~ 326 (585)
+++++. ++..|.||||+|+..|+.+++++|+++|. .|..|+||||+|+. |+.+++++|++.+ +++|.+|..
T Consensus 2 ~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHM---LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSC---CCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccC---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 568888 89999999999999999999999999993 56889999999999 9999999999998 999999999
Q ss_pred -CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCccc
Q 007923 327 -GYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYY 377 (585)
Q Consensus 327 -G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~ 377 (585)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+.
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~ 128 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIAR 128 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999987765444
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2e-25 Score=209.22 Aligned_cols=155 Identities=11% Similarity=0.028 Sum_probs=110.5
Q ss_pred hHHHHHHHHhhHHHHHHHHhcCCCccccC-CCChhHHhhhcccCCH----HHHHHHHHHcCCCCCCCCCCCCCCChHHHH
Q 007923 196 ILVVLSVAHMCGKACEKLLERCIEITVKS-DIDIVTLDKTLPQHIV----KQIIDLRVELSLHRSESCGFPDKHTKRIHR 270 (585)
Q Consensus 196 t~l~l~~a~~~~~~~~~Ll~~g~din~~d-~~g~t~L~~A~~~~~~----~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~ 270 (585)
++++.|+..|+.+.++.++..+. +.++ ..|+||||+|+. .++ .+++++|+++|+++|. +|..|+||||+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~-~~~~~~~~~iv~~Ll~~Gadvn~---~d~~g~TpLh~ 81 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLR-NNNDEARYKISMFLINKGADIKS---RTKEGTTLFFP 81 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTT-CSCHHHHHHHHHHHHHTTCCSSC---CCTTCCCTHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHH-cCCcchHHHHHHHHHHCCCCCCC---CCCCCCcHHHH
Confidence 44566666666666666665543 3344 557777777776 343 3477777777777777 67777777777
Q ss_pred HHhCCC------HHHHHHHHhCCC----CCCCCc-hHHHHHHHcC-----CHHHHHHHHh-hCCCCcccCCCCCChHHHH
Q 007923 271 ALDSDD------VELVRMLLKEAH----TNLDDA-HALHYAVAYC-----DAKTTTELLD-LGLADVNHRNSRGYTVLHV 333 (585)
Q Consensus 271 A~~~g~------~~~v~~Ll~~g~----~d~~g~-tpLh~A~~~g-----~~~~v~~LL~-~~~advn~~d~~G~TpLh~ 333 (585)
|+..|+ .+++++|+++|+ .|..|+ ||||+|+..+ +.+++++||. .| +|+|.+|..|+||||+
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTTCCCTTSCCHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCcccCCCCCCHHHH
Confidence 777665 466777777772 445666 7777777643 3568899998 65 9999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q 007923 334 AAMRKEPKIIVSLLTKGARPSDLT 357 (585)
Q Consensus 334 Aa~~g~~~iv~~Ll~~gad~~~~d 357 (585)
|+..|+.++|++|+++..+.+.++
T Consensus 161 A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHcCCHHHHHHHHHHHHHHhccc
Confidence 999999999999998766655554
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.5e-25 Score=210.19 Aligned_cols=144 Identities=11% Similarity=0.004 Sum_probs=126.1
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCC-CCCChHHHHHHhCCCH----HHHHHHHhCCC----CCCCCchHH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFP-DKHTKRIHRALDSDDV----ELVRMLLKEAH----TNLDDAHAL 297 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d-~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~----~d~~g~tpL 297 (585)
+.++|+.|+. .|..+.++.++..+.+ . ++ ..|+||||+|+..|+. +++++||++|+ .|..|+|||
T Consensus 6 ~~~~l~~Aa~-~g~~~~~~~l~~~~~~--~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 6 EYRTVSAAAM-LGTYEDFLELFEKGYE--D---KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLF 79 (186)
T ss_dssp HCSSHHHHHH-HSCHHHHHHHHHHSSS--C---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTH
T ss_pred cccHHHHHHH-cCCHHHHHHHHhcCcc--c---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 5678999999 6888888888887743 4 44 7899999999999985 59999999994 568899999
Q ss_pred HHHHHcCC------HHHHHHHHhhCCCCcccCCCCCC-hHHHHHHHcCC-----HHHHHHHHH-cCCCCCCCCCCCCCHH
Q 007923 298 HYAVAYCD------AKTTTELLDLGLADVNHRNSRGY-TVLHVAAMRKE-----PKIIVSLLT-KGARPSDLTLDGRKAL 364 (585)
Q Consensus 298 h~A~~~g~------~~~v~~LL~~~~advn~~d~~G~-TpLh~Aa~~g~-----~~iv~~Ll~-~gad~~~~d~~G~TpL 364 (585)
|+|+..|+ .+++++||+.| +|+|.+|..|+ ||||+|+..+. .+++++|++ +|+|++.+|..|+|||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 99999987 67899999987 99999999999 99999999554 569999999 9999999999999999
Q ss_pred HHHHHcCCCCccc
Q 007923 365 QISKRLTKAADYY 377 (585)
Q Consensus 365 ~~A~~~~~~~~~~ 377 (585)
|+|++.++...+.
T Consensus 159 ~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 159 EFVKRCQKPIALK 171 (186)
T ss_dssp HHHHTTTCHHHHH
T ss_pred HHHHHcCCHHHHH
Confidence 9999987766554
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=7.8e-24 Score=184.05 Aligned_cols=122 Identities=24% Similarity=0.300 Sum_probs=114.4
Q ss_pred CChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHH
Q 007923 226 IDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAV 301 (585)
Q Consensus 226 ~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~ 301 (585)
+|.||||+|+. .+..+++++|+++|++++. ++..|.||||+|+..|+.+++++|++.|. .|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAAR-NGHLEVVKLLLEAGADVNA---KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHH-HTCHHHHHHHHHHTCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHH-cCcHHHHHHHHHcCCCCCC---cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Confidence 48899999999 7899999999999999998 89999999999999999999999999983 5678999999999
Q ss_pred HcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 007923 302 AYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR 352 (585)
Q Consensus 302 ~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad 352 (585)
..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 77 ~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999987 99999999999999999999999999999999986
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4e-24 Score=194.32 Aligned_cols=141 Identities=8% Similarity=-0.024 Sum_probs=114.4
Q ss_pred ccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCCh-
Q 007923 188 LDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTK- 266 (585)
Q Consensus 188 ~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t- 266 (585)
...+..|.|++++|+..++.+++++|+++|++++.+|..|+||||+|+ .++.+++++|+++|++++. +|..|+|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~v~~Ll~~g~~~~~---~d~~g~tt 80 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM--MGSARVAELLLLHGAEPNC---ADPATLTR 80 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC--TTCHHHHHHHHTTTCCCCC---CCTTTCCC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--cCCHHHHHHHHHcCCCCCC---cCCCCCcH
Confidence 356778899999999999999999999999999999999999999984 5899999999999999999 8999999
Q ss_pred HHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHH
Q 007923 267 RIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVA 334 (585)
Q Consensus 267 ~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~A 334 (585)
|||+|+..|+.++|++|+++|+ .|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||.+-+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA-GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC-CCCCccCcCcCcccccC
Confidence 9999999999999999999983 5788999999999999999999999987 99999999999998744
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1e-23 Score=186.97 Aligned_cols=122 Identities=16% Similarity=0.095 Sum_probs=108.0
Q ss_pred CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHH
Q 007923 224 SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHY 299 (585)
Q Consensus 224 d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~ 299 (585)
...|.||||+|+. .++.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++|. .|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 11 GSDLGKKLLEAAR-AGQDDEVRILMANGADVNA---KDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHL 86 (136)
T ss_dssp -CHHHHHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cccccHHHHHHHH-hCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHH
Confidence 3457899999999 7889999999999999988 88899999999999999999999999883 56788999999
Q ss_pred HHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 007923 300 AVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKG 350 (585)
Q Consensus 300 A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 350 (585)
|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 87 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999887 999999999999999999999999999999876
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=3.1e-24 Score=190.37 Aligned_cols=116 Identities=22% Similarity=0.191 Sum_probs=95.2
Q ss_pred CCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCC
Q 007923 251 SLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSR 326 (585)
Q Consensus 251 ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~ 326 (585)
|+|+ . +|..|+||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.+ ++++.+|..
T Consensus 1 G~d~-~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-F---TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-C---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-C---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 5566 3 57888888888888888888888888873 5677888888888888888888888877 888888888
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 327 GYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 327 G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..+
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc
Confidence 888999888888888888888888888888888888888887643
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.3e-24 Score=213.06 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=131.1
Q ss_pred CChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC-C---CCCCCchHHHHHH
Q 007923 226 IDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA-H---TNLDDAHALHYAV 301 (585)
Q Consensus 226 ~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~A~ 301 (585)
.+.+++.+++. .++.+++..+...+.++ +..|.||||+|+..|+.++|++|++ | + .|..|+||||+|+
T Consensus 14 ~~~~~~l~~~~-~g~~~~~~~~~~~~~~~------~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~ 85 (244)
T 3ui2_A 14 EGAMEYLIEWK-DGHSPSWVPSSYIAADV------VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA 85 (244)
T ss_dssp TTEEEEEEEES-SCCCCEEEEGGGSCHHH------HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHH
T ss_pred CCccHHHHHHH-cCCCccccccccccccc------ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHH
Confidence 45666666666 45544444444444333 3478999999999999999999999 6 3 5688999999999
Q ss_pred HcCCHHHHHHHHhhCCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccccC
Q 007923 302 AYCDAKTTTELLDLGLADVNHRN-SRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPT 380 (585)
Q Consensus 302 ~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~ 380 (585)
..|+.++|++||+.| +++|.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 86 ~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-------- 156 (244)
T 3ui2_A 86 GLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-------- 156 (244)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT--------
T ss_pred HCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh--------
Confidence 999999999999997 9999999 889999999999999999999999999999999999999999996321
Q ss_pred cCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhhhhHHHHHH
Q 007923 381 EEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLE 428 (585)
Q Consensus 381 ~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~~~~~l~l~ 428 (585)
...+.||||+|+..++..++.+.
T Consensus 157 -------------------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 157 -------------------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp -------------------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred -------------------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 24578999999985555444443
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=4.1e-24 Score=189.63 Aligned_cols=130 Identities=14% Similarity=0.094 Sum_probs=114.3
Q ss_pred CCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCC
Q 007923 217 CIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLD 292 (585)
Q Consensus 217 g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~ 292 (585)
|+|+ .+|..|+||||+|+. .++.+++++|++.|++++. +|..|+||||+|+..|+.+++++|+++|. .|..
T Consensus 1 G~d~-~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASI-KGDIPSVEYLLQNGSDPNV---KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ 75 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHH-HTCHHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGG
T ss_pred CCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCC
Confidence 6777 788999999999999 7899999999999999999 89999999999999999999999999983 5677
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 007923 293 DAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR 352 (585)
Q Consensus 293 g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad 352 (585)
|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+++++|.+.+..
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 999999999999999999999987 99999999999999999999999999988876653
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=6.7e-23 Score=191.42 Aligned_cols=108 Identities=24% Similarity=0.333 Sum_probs=100.2
Q ss_pred CCCCChHHHHHHhCCCHHHHHHHHhCC-C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCC-CCCChHHHHHH
Q 007923 261 PDKHTKRIHRALDSDDVELVRMLLKEA-H---TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRN-SRGYTVLHVAA 335 (585)
Q Consensus 261 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~---~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~Aa 335 (585)
+..|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.+++++|++.| +++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 4578899999999999999999998 6 3 5688999999999999999999999987 9999998 89999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 007923 336 MRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRL 370 (585)
Q Consensus 336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 370 (585)
..|+.+++++|+++|++++.+|.+|+||||+|++.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999974
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.5e-22 Score=175.83 Aligned_cols=115 Identities=26% Similarity=0.369 Sum_probs=107.5
Q ss_pred CCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcC
Q 007923 263 KHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRK 338 (585)
Q Consensus 263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g 338 (585)
+|+||||+|+..|+.+++++|+++|. .|..|.||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 58999999999999999999999983 5688999999999999999999999987 999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 339 EPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 339 ~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
+.+++++|+++|++++.+|..|+||||+|+..++...+..
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 119 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999999999999999999999999877655543
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.9e-22 Score=175.35 Aligned_cols=108 Identities=25% Similarity=0.257 Sum_probs=97.0
Q ss_pred CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923 260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA 335 (585)
Q Consensus 260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 335 (585)
.+..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 35678899999999999999999999883 5678999999999999999999999887 999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923 336 MRKEPKIIVSLLTKGARPSDLTLDGRKALQISK 368 (585)
Q Consensus 336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 368 (585)
..|+.+++++|+++|++++.+|.+|+||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 999999999999999999999999999999984
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.2e-24 Score=213.11 Aligned_cols=166 Identities=14% Similarity=0.014 Sum_probs=142.9
Q ss_pred CCChHHHHHHhCCCHHHHHHHHhCC-CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHH
Q 007923 263 KHTKRIHRALDSDDVELVRMLLKEA-HTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPK 341 (585)
Q Consensus 263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~ 341 (585)
.+.+++++++..|+.+.+..+...+ +++.+|.||||+|+..|+.++++.||. + +++|.+|..|+||||+|+..|+.+
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~g~~~ 91 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSDK 91 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred CCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHHCCCHH
Confidence 4556666666677766665555555 356789999999999999999999998 5 999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh
Q 007923 342 IIVSLLTKGARPSDLT-LDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL 420 (585)
Q Consensus 342 iv~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~ 420 (585)
+|++|+++|++++.+| ..|+||||+|+..++...+.. |++.+++++.+|..|.||||+|+.
T Consensus 92 ~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~----------------Ll~~ga~~~~~d~~g~t~l~~A~~-- 153 (244)
T 3ui2_A 92 CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEA----------------LVELGADIEVEDERGLTALELARE-- 153 (244)
T ss_dssp HHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHH----------------HHHTTCCTTCCCTTCCCHHHHHHH--
T ss_pred HHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH----------------HHHCCCCCCCCCCCCCcHHHHHHH--
Confidence 9999999999999998 889999999999887765544 788999999999999999999995
Q ss_pred hhHHHHHHhhhhhhhhcCCCCCchhhHHhhhcCCccccccccc
Q 007923 421 RMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIK 463 (585)
Q Consensus 421 ~~~~l~l~~~~~~~~~L~~~~g~t~l~~A~~~~~~~~~~~l~~ 463 (585)
. .....+.|||++|+..|+.+++.++..
T Consensus 154 -------~--------~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 154 -------I--------LKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp -------H--------HTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -------H--------HhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 2 223678999999999999999888765
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=3.1e-22 Score=177.27 Aligned_cols=123 Identities=13% Similarity=0.040 Sum_probs=94.1
Q ss_pred hhhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCH
Q 007923 161 MVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 161 ~~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~ 240 (585)
..||||+|+..|..+++++|+++|++++.++..|.|++++|+..++.+++++|+++|++++.+|..|.||||+|+. .++
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~-~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF-IGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-HTC
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH-cCC
Confidence 3677777777777777777777777777777777777777777777777777777777777777777777777777 577
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhCC
Q 007923 241 KQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEA 287 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g 287 (585)
.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 93 ~~~v~~Ll~~g~~~~~---~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNA---QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcC---cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7777777777777777 6777777777777777777777777765
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=2.9e-23 Score=199.99 Aligned_cols=134 Identities=14% Similarity=0.045 Sum_probs=107.9
Q ss_pred cCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHHHHHhCCCHHHHHHHHhC-CC----CCCCCchHH
Q 007923 223 KSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKE-AH----TNLDDAHAL 297 (585)
Q Consensus 223 ~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~----~d~~g~tpL 297 (585)
.+..|.||||+|+. .++.+++++|++.|++++. +|..|+||||+|+..|+.++|++|++. |. .|..|+|||
T Consensus 69 ~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 69 QAESIDNPLHEAAK-RGNLSWLRECLDNRVGVNG---LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HEEEESCHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred cccccccccccccc-cCcHHHHHHHHhCCCCccc---cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 46678999999998 6889999999999999998 889999999999999999999999998 62 678899999
Q ss_pred HHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 007923 298 HYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGR 361 (585)
Q Consensus 298 h~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~ 361 (585)
|+|+..|+.+++++||+.| ++++.+|..|+||||+|+..|+.++++.|++.|++.+..+.+|+
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999997 99999999999999999999999999999999998887776554
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1e-22 Score=205.71 Aligned_cols=142 Identities=17% Similarity=0.091 Sum_probs=117.9
Q ss_pred CCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCC---CCCCCCChHHHHHHhC---CCHHHHHHHHhCCC----CCCCC
Q 007923 224 SDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESC---GFPDKHTKRIHRALDS---DDVELVRMLLKEAH----TNLDD 293 (585)
Q Consensus 224 d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~---~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~----~d~~g 293 (585)
...+.++|+.|+. .+..+.++.|++.|++++... ..+..|.||||+|+.. |+.++|++|+++|+ .|..|
T Consensus 148 ~~~~~~~L~~A~~-~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 148 CTPEPQRLWTAIC-NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp CC-CHHHHHHHHH-TTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred cCchHHHHhhhhh-ccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 3446788999999 788889999999999988610 0277899999999987 89999999999983 56889
Q ss_pred chHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCC
Q 007923 294 AHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKA 373 (585)
Q Consensus 294 ~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 373 (585)
+||||+|+..|+.+++++||+.| ++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999987 99999999999999999999999999999999987 589999999988764
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.7e-23 Score=195.47 Aligned_cols=136 Identities=14% Similarity=0.009 Sum_probs=90.6
Q ss_pred cccCChHHHHHHHHhhHHHHHHHHhcCCCccccCCCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCC-CCCChHHH
Q 007923 191 VVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFP-DKHTKRIH 269 (585)
Q Consensus 191 ~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~~d~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d-~~g~t~Lh 269 (585)
+..|.||+++|+..++.+++++|++ |+++|.+|..|+||||+|+. .++.+++++|+++|+++|. ++ ..|+||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~---~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAG-LGSDKCVRLLAEAGADLDH---RDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCTTC---CCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc---CCCCCCCCHHH
Confidence 4456666666666667777777776 66777777777777777776 5666777777777777766 55 66777777
Q ss_pred HHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHH
Q 007923 270 RALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVS 345 (585)
Q Consensus 270 ~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 345 (585)
+|+..|+.+++++|+++|+ .|..|+||||+|+..++. ..+.|||++|+..|+.+++++
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~ 177 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINV 177 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHH
Confidence 7777777777777776662 456667777777653211 235667777777777777777
Q ss_pred HHHc
Q 007923 346 LLTK 349 (585)
Q Consensus 346 Ll~~ 349 (585)
|.++
T Consensus 178 L~~~ 181 (183)
T 3deo_A 178 LEGQ 181 (183)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 7654
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=3.8e-22 Score=173.44 Aligned_cols=115 Identities=17% Similarity=0.134 Sum_probs=103.5
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923 289 TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISK 368 (585)
Q Consensus 289 ~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 368 (585)
.+..|.||||+|+..|+.++++.|++.+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 4567899999999999999999999988 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHHHHHHhhh
Q 007923 369 RLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDL 420 (585)
Q Consensus 369 ~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~Lh~A~~~~ 420 (585)
..++...+.. |++.+++++.+|..|.||||+|+...
T Consensus 82 ~~~~~~~v~~----------------Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 82 YEGHVSCVKL----------------LLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHTCHHHHHH----------------HHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HcCCHHHHHH----------------HHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 9887655543 78899999999999999999998633
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=1.3e-21 Score=188.31 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=94.0
Q ss_pred CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923 260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA 335 (585)
Q Consensus 260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 335 (585)
.+..|.||||+|+..|+.++|++|++.|. .|..|+||||+|+..|+.++|++||..+|+++|.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 35677888888888888888888888873 56778888888888888888888888844888888888888888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 336 MRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
..|+.+++++|+++|++++.+|.+|+||||+|+..+
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 184 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAA 184 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHH
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchh
Confidence 888888888888888888888888888888887644
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=197.35 Aligned_cols=140 Identities=12% Similarity=0.030 Sum_probs=115.6
Q ss_pred cccCChHHHHHHHHhhHHHHHHHHhcCCCccc------cCCCChhHHhhhccc--CCHHHHHHHHHHcCCCCCCCCCCCC
Q 007923 191 VVADDILVVLSVAHMCGKACEKLLERCIEITV------KSDIDIVTLDKTLPQ--HIVKQIIDLRVELSLHRSESCGFPD 262 (585)
Q Consensus 191 ~~~~~t~l~l~~a~~~~~~~~~Ll~~g~din~------~d~~g~t~L~~A~~~--~~~~~i~~~Ll~~ga~in~~~~~d~ 262 (585)
.....++++.|+..++.+.++.|++.|++++. .+..|.||||+|+.. .+..+++++|+++|+++|. +|.
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~---~d~ 224 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA---KAA 224 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC---CCT
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC---CCC
Confidence 34456778899999999999999999999988 688899999999973 2789999999999999999 899
Q ss_pred CCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcC
Q 007923 263 KHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRK 338 (585)
Q Consensus 263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g 338 (585)
.|+||||+|+..|+.++|++|+++|+ .|..|.||||+|+..|+.+++++|++.+ ++ .|.||||+|+..|
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ-AG------TFAFPLHVDYSWV 297 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-HH------TTSSCCC------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-CC------CCCChhHHHHhcC
Confidence 99999999999999999999999983 6788999999999999999999999887 54 5889999999888
Q ss_pred CH
Q 007923 339 EP 340 (585)
Q Consensus 339 ~~ 340 (585)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 64
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=9.3e-21 Score=196.05 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=115.0
Q ss_pred cCCCChhHHhhhcccC-CHHHHHHHHHHcCCCCCCCCCCC--CCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCch
Q 007923 223 KSDIDIVTLDKTLPQH-IVKQIIDLRVELSLHRSESCGFP--DKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAH 295 (585)
Q Consensus 223 ~d~~g~t~L~~A~~~~-~~~~i~~~Ll~~ga~in~~~~~d--~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~t 295 (585)
.+..+.|+||.|+. . +..+++++|+++|+++|. .+ ..|.||||+|+..|+.++|++|+++|+ .|..|+|
T Consensus 195 ~~~~~~t~L~~Aa~-~~g~~~~v~~LL~~Gadvn~---~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~T 270 (368)
T 3jue_A 195 GSLHPGALLFRASG-HPPSLPTMADALAHGADVNW---VNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRG 270 (368)
T ss_dssp --CCHHHHHHHHTS-SSCCHHHHHHHHHTTCCTTC---CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccCCCCcHHHHHHH-ccCCHHHHHHHHHcCCCCCc---cccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 44567899999999 6 999999999999999999 66 899999999999999999999999993 5688999
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcC
Q 007923 296 ALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGA---RPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 296 pLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ga---d~~~~d~~G~TpL~~A~~~~ 371 (585)
|||+|+..|+.+++++||+.| ++++.+|..|+||||+|+..|+.+++++|+..|. +....+..+.|+++++....
T Consensus 271 pLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999997 9999999999999999999999999999998764 45566778899999887653
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=9.2e-21 Score=205.14 Aligned_cols=135 Identities=18% Similarity=0.112 Sum_probs=96.5
Q ss_pred ChhHHhhhcccCCHHHHHHHHHHcCCCCCCC---CCCCCCCChHHHHHHh---CCCHHHHHHHHhCCC----CCCCCchH
Q 007923 227 DIVTLDKTLPQHIVKQIIDLRVELSLHRSES---CGFPDKHTKRIHRALD---SDDVELVRMLLKEAH----TNLDDAHA 296 (585)
Q Consensus 227 g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~---~~~d~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~----~d~~g~tp 296 (585)
..+.||.|+. .++.++++.|++.|+++|.. ...+..|+||||+|+. .|+.++|++||++|+ .|..|+||
T Consensus 132 ~~~~L~~A~~-~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAIC-NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHH-HTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHh-ccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 3456777777 57777777777777777661 0016677777777755 777777777777773 55678888
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 007923 297 LHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKR 369 (585)
Q Consensus 297 Lh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 369 (585)
||+|+..|+.++|++||+.| +|+|.+|..|+||||+|+..|+.+++++|+++||+++. ||+|.+..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 88888888888888888887 99999999999999999999999999999999998876 46665543
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=3.8e-20 Score=184.71 Aligned_cols=186 Identities=14% Similarity=0.048 Sum_probs=137.4
Q ss_pred hhHHHHHHhcChhHHHHHHHhhccccccccccCChHHHHHHHHhhHHHHHHHHhcC-CCccccCCCChhHHhhhcccCCH
Q 007923 162 VEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERC-IEITVKSDIDIVTLDKTLPQHIV 240 (585)
Q Consensus 162 ~t~L~~A~~~~~~elv~~ll~~g~~~~~~~~~~~t~l~l~~a~~~~~~~~~Ll~~g-~din~~d~~g~t~L~~A~~~~~~ 240 (585)
.+.++.+...|+..+.+++.................. ......-..+|+...- ...+.......++|+.|+. .+.
T Consensus 67 ~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~---~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~-~~d 142 (278)
T 1dcq_A 67 TSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDM---IARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK-TRD 142 (278)
T ss_dssp GGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCH---HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCH---HHHHHHHHHHHHHhhcccccccccchhhhhhhhHhh-hcc
Confidence 5678888889998777666443222111011111111 1111111123443322 2222233345689999999 788
Q ss_pred HHHHHHHHHcCCCCCCC---CCCCCCCChHHHHHHhC---CCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHH
Q 007923 241 KQIIDLRVELSLHRSES---CGFPDKHTKRIHRALDS---DDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTT 310 (585)
Q Consensus 241 ~~i~~~Ll~~ga~in~~---~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~ 310 (585)
.+.+..+++.|++++.. ...+..|+||||+|+.. |+.++|++|+++|+ .|..|+||||+|+..|+.++|+
T Consensus 143 ~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~ 222 (278)
T 1dcq_A 143 IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLK 222 (278)
T ss_dssp HHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999996541 11478899999999999 89999999999993 6788999999999999999999
Q ss_pred HHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 007923 311 ELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGAR 352 (585)
Q Consensus 311 ~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad 352 (585)
+||+.| +|+|.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 223 ~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 223 LLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999987 99999999999999999999999999999999985
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.4e-20 Score=152.61 Aligned_cols=89 Identities=29% Similarity=0.418 Sum_probs=79.1
Q ss_pred CCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcC
Q 007923 263 KHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRK 338 (585)
Q Consensus 263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g 338 (585)
+|+||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999999998883 5678899999999999999999999887 999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q 007923 339 EPKIIVSLLTKGAR 352 (585)
Q Consensus 339 ~~~iv~~Ll~~gad 352 (585)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999985
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=2.3e-19 Score=179.05 Aligned_cols=115 Identities=19% Similarity=0.220 Sum_probs=105.9
Q ss_pred CCChHHHHHHhCCCHHHHHHHHhCCC-C---------CCCCchHHHHHHHc---CCHHHHHHHHhhCCCCcccCCCCCCh
Q 007923 263 KHTKRIHRALDSDDVELVRMLLKEAH-T---------NLDDAHALHYAVAY---CDAKTTTELLDLGLADVNHRNSRGYT 329 (585)
Q Consensus 263 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~---------d~~g~tpLh~A~~~---g~~~~v~~LL~~~~advn~~d~~G~T 329 (585)
...++|+.|+..|+.+.++.+++.|. + |..|+||||+|+.. |+.+++++|++.| +++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCC
Confidence 34689999999999999999999983 2 57799999999999 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCcccc
Q 007923 330 VLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYI 378 (585)
Q Consensus 330 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~ 378 (585)
|||+|+..|+.++|++|+++|||++.+|.+|+||||+|+..++...+..
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999999999887665543
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=9.2e-21 Score=162.47 Aligned_cols=104 Identities=27% Similarity=0.282 Sum_probs=95.3
Q ss_pred CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923 260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA 335 (585)
Q Consensus 260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 335 (585)
+|..|+||||+|+..|+.+++++|+++|. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHH
Confidence 68899999999999999999999999983 5678999999999999999999999987 999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Q 007923 336 MRKEPKIIVSLLTKGARPSDLTLDGRKAL 364 (585)
Q Consensus 336 ~~g~~~iv~~Ll~~gad~~~~d~~G~TpL 364 (585)
..|+.+++++|+++|+++|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999884
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=7.3e-20 Score=150.59 Aligned_cols=86 Identities=28% Similarity=0.366 Sum_probs=79.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 007923 292 DDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLT 371 (585)
Q Consensus 292 ~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~~ 371 (585)
+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999987 999999999999999999999999999999999999999999999999999988
Q ss_pred CCCcccc
Q 007923 372 KAADYYI 378 (585)
Q Consensus 372 ~~~~~~~ 378 (585)
+...+..
T Consensus 80 ~~~~~~~ 86 (93)
T 1n0q_A 80 HLEVVKL 86 (93)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 7665543
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=1.9e-19 Score=194.85 Aligned_cols=130 Identities=13% Similarity=0.045 Sum_probs=97.3
Q ss_pred hHHHHHHHHhhHHHHHHHHhcCCCcccc------CCCChhHHhhh---cccCCHHHHHHHHHHcCCCCCCCCCCCCCCCh
Q 007923 196 ILVVLSVAHMCGKACEKLLERCIEITVK------SDIDIVTLDKT---LPQHIVKQIIDLRVELSLHRSESCGFPDKHTK 266 (585)
Q Consensus 196 t~l~l~~a~~~~~~~~~Ll~~g~din~~------d~~g~t~L~~A---~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t 266 (585)
+.|+.|+..++.+.++.|+++|+++|.. +..|.||||+| +. .++.+++++|+++|+++|. +|..|+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~-~g~~~~v~~Ll~~ga~vn~---~d~~g~T 209 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVAN-QASLPLVDFIIQNGGHLDA---KAADGNT 209 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCC-TTTHHHHHHHHHHSCCTTC---CCSSSCC
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcc-cccHHHHHHHHHcCCCCCc---cCCCCCc
Confidence 5677788888888888888888888877 77788888888 44 6778888888888888888 7888888
Q ss_pred HHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHH
Q 007923 267 RIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAM 336 (585)
Q Consensus 267 ~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 336 (585)
|||+|+..|+.++|++||++|+ .|..|+||||+|+..|+.+++++|++.| ++++. ||+|.+..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ-AGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC-C------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCC------Ccceeecc
Confidence 8888888888888888888883 5677888888888888888888888887 88775 56776553
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=1.7e-19 Score=186.56 Aligned_cols=158 Identities=11% Similarity=0.035 Sum_probs=90.6
Q ss_pred cCChHHHHHHHH-hhHHHHHHHHhcCCCccccC--CCChhHHhhhcccCCHHHHHHHHHHcCCCCCCCCCCCCCCChHHH
Q 007923 193 ADDILVVLSVAH-MCGKACEKLLERCIEITVKS--DIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIH 269 (585)
Q Consensus 193 ~~~t~l~l~~a~-~~~~~~~~Ll~~g~din~~d--~~g~t~L~~A~~~~~~~~i~~~Ll~~ga~in~~~~~d~~g~t~Lh 269 (585)
.+.++++.|+.. ++.+++++|+++|+++|..+ ..|.||||+|+. .++.+++++|+++|+++|. +|..|+||||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~-~g~~~iv~~LL~~Gadvn~---~d~~G~TpLh 273 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATA-ANSLLACEFLLQNGANVNQ---ADSAGRGPLH 273 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC---CCTTSCCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHH-CCCHHHHHHHHHcCCCCCC---CCCCCCCHHH
Confidence 445666666666 77777777777777777777 677777777777 6777777777777777777 7777777888
Q ss_pred HHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCC--CCcccCCCCCChHHHHHHHcCC--HH
Q 007923 270 RALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGL--ADVNHRNSRGYTVLHVAAMRKE--PK 341 (585)
Q Consensus 270 ~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~--advn~~d~~G~TpLh~Aa~~g~--~~ 341 (585)
+|+..|+.++|++||++|+ .|..|.||||+|+..|+.+++++|+..+. ++....+..+.|+|+++..... .+
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~ 353 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASD 353 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCC
Confidence 7777777777777777773 55677778888877777777777776541 3333445667777777765542 34
Q ss_pred HHHHHHHcCCCCC
Q 007923 342 IIVSLLTKGARPS 354 (585)
Q Consensus 342 iv~~Ll~~gad~~ 354 (585)
-.+.|..++.+++
T Consensus 354 ~~ekl~r~~~~~~ 366 (368)
T 3jue_A 354 DPEKLSRRSHDLH 366 (368)
T ss_dssp -------------
T ss_pred CHHHHHhcCCCcC
Confidence 5566666666654
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=1e-19 Score=155.87 Aligned_cols=108 Identities=28% Similarity=0.321 Sum_probs=97.1
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923 289 TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISK 368 (585)
Q Consensus 289 ~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 368 (585)
.|.+|+||||+|+..|+.++++.|++.+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 5789999999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccccCcCCCCCcccchHHHHHHhhhhcCCcccCCCCHH
Q 007923 369 RLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSF 413 (585)
Q Consensus 369 ~~~~~~~~~~~~~~g~t~~~~~~~~~ll~~~~~~n~~~~~g~t~L 413 (585)
..++...+.. |++.++++|.++..|.||-
T Consensus 84 ~~~~~~~~~~----------------Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKL----------------LDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHH----------------HHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHH----------------HHHcCCCCCcCCccccccc
Confidence 9876554433 7788999999998888873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=3.7e-17 Score=138.87 Aligned_cols=85 Identities=26% Similarity=0.244 Sum_probs=64.7
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 007923 289 TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISK 368 (585)
Q Consensus 289 ~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 368 (585)
.|.+|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 4567778888888888888888777776 778877778888888888888888888888888888877878888888887
Q ss_pred HcCCCC
Q 007923 369 RLTKAA 374 (585)
Q Consensus 369 ~~~~~~ 374 (585)
..++..
T Consensus 99 ~~~~~~ 104 (110)
T 2zgd_A 99 DNGNED 104 (110)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 766543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1.3e-16 Score=135.54 Aligned_cols=86 Identities=20% Similarity=0.277 Sum_probs=77.4
Q ss_pred CCCCCChHHHHHHhCCCHHHHHHHHhCCC----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccCCCCCChHHHHHH
Q 007923 260 FPDKHTKRIHRALDSDDVELVRMLLKEAH----TNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAA 335 (585)
Q Consensus 260 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~d~~g~tpLh~A~~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 335 (585)
.+..|.||||+|+..|+.+++++|++.|. .|..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 57789999999999999999999999883 5678999999999999999999999987 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 007923 336 MRKEPKIIVSL 346 (585)
Q Consensus 336 ~~g~~~iv~~L 346 (585)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 115
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.60 E-value=4.7e-15 Score=127.98 Aligned_cols=110 Identities=18% Similarity=0.283 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.+.+.|.+++.++. +|||+|.++ |+.|+|||+||++|||||++||.+.+.+... ..+...++.+++|
T Consensus 7 ~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~-----~~i~l~~~~~~~f 77 (120)
T 2if5_A 7 DHSSDILSGLNEQRTQGL---LCDVVILVE-GREFPTHRSVLAACSQYFKKLFTSGAVVDQQ-----NVYEIDFVSAEAL 77 (120)
T ss_dssp THHHHHHHHHHHHHHTTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHHC-----CC-----SEEECCSSCHHHH
T ss_pred chHHHHHHHHHHHHhcCC---CCCeEEEEC-CEEEeHHHHHHHHhCHHHHHHhcCCccccCC-----ceEEeCCCCHHHH
Confidence 467889999999999999 999999998 9999999999999999999999987654322 1233446788899
Q ss_pred HHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 122 VAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
..+|+|+|||++.++. +.+...+..|..++...+.+...
T Consensus 78 ~~ll~~~Yt~~~~~~~---------------------~~~~~ll~~A~~~~i~~L~~~C~ 116 (120)
T 2if5_A 78 TALMDFAYTATLTVST---------------------ANVGDILSAARLLEIPAVSHVCA 116 (120)
T ss_dssp HHHHHHHHHSCCCCCG---------------------GGHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCccCH---------------------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999875432 12345678888888888776653
No 116
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.59 E-value=5.9e-15 Score=128.75 Aligned_cols=110 Identities=18% Similarity=0.277 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.+++.|.+++.++. ||||+|.|+ |+.|+|||+||++|||||++||.+.+.+....+.+. .++.+++|
T Consensus 11 ~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~-----~~~~~~~f 81 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDI---LTDVVIVVS-REQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLD-----PEINPEGF 81 (127)
T ss_dssp THHHHHHHHHHHHHHTTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECC-----TTSCHHHH
T ss_pred hHHHHHHHHHHHHHhcCC---CCCEEEEEC-CEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeC-----CCCCHHHH
Confidence 567889999999999999 999999998 999999999999999999999998765522333331 56788999
Q ss_pred HHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 122 VAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
..+|+|+|||++.++. +.+...|..|..++...+.+...
T Consensus 82 ~~ll~~~Ytg~~~~~~---------------------~~~~~ll~~A~~~~i~~L~~~c~ 120 (127)
T 1r29_A 82 NILLDFMYTSRLNLRE---------------------GNIMAVMATAMYLQMEHVVDTCR 120 (127)
T ss_dssp HHHHHHHHHSCCCCCT---------------------TTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCcCcCH---------------------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999876432 12345678888888888766543
No 117
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.59 E-value=5.1e-15 Score=127.53 Aligned_cols=107 Identities=21% Similarity=0.249 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.|++.|.+++.++. ||||+|.++ |++|+|||+||++|||||++||.+++ ... +...++.+++|
T Consensus 6 ~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~------i~l~~~~~~~f 72 (119)
T 3b84_A 6 QHSVRVLQELNKQREKGQ---YCDATLDVG-GLVFKAHWSVLACCSHFFQSLYGDGS---GGS------VVLPAGFAEIF 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHTTTT---CCC------EEECGGGHHHH
T ss_pred hHHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEEeeHHHHhhcCHHHHHHHCCCC---CCe------EEeCCCCHHHH
Confidence 677889999999999999 999999998 99999999999999999999998763 123 33345678899
Q ss_pred HHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHh
Q 007923 122 VAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQR 182 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~ 182 (585)
..+|+|+|||++.++.+ .+...|..|..++..++.+...+
T Consensus 73 ~~ll~~iYtg~~~~~~~---------------------~v~~ll~~A~~~~i~~L~~~C~~ 112 (119)
T 3b84_A 73 GLLLDFFYTGHLALTSG---------------------NRDQVLLAARELRVPEAVELCQS 112 (119)
T ss_dssp HHHHHHHHHSCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCccCHH---------------------HHHHHHHHHHHhCcHHHHHHHHH
Confidence 99999999998764322 12456788888888887776544
No 118
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.59 E-value=3.9e-15 Score=131.24 Aligned_cols=109 Identities=21% Similarity=0.233 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhH
Q 007923 41 ITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDP 120 (585)
Q Consensus 41 ~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~ 120 (585)
..+...|++.|.+++.++. ||||+|.|+ |+.|+|||+||++||+||++||.+.+ ... +...++.+++
T Consensus 6 ~~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~------i~l~~~~~~~ 72 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQ---YCDATLDVG-GLVFKAHWSVLACCSHFFQRIYGDGT---GGS------VVLPAGFAEI 72 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTT---TCCEEEEET-TEEEEECHHHHHHHCHHHHHTCC-------CC------EEECGGGHHH
T ss_pred ccHHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEehHHHHHHHhCHHHHHHHcCCC---CCe------EEeCCCCHHH
Confidence 4577889999999999999 999999998 99999999999999999999998753 122 3334567889
Q ss_pred HHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923 121 LVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH 183 (585)
Q Consensus 121 ~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~ 183 (585)
|..+|+|+|||++.+..+ .+...|..|..++..++++...+.
T Consensus 73 f~~lL~fiYtg~~~i~~~---------------------~v~~ll~~A~~l~i~~L~~~C~~~ 114 (135)
T 2yy9_A 73 FGLLLDFFYTGHLALTSG---------------------NRDQVLLAAKELRVPEAVELCQSF 114 (135)
T ss_dssp HHHHHHHHHHSCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCCHH---------------------HHHHHHHHHHHhCcHHHHHHHHHH
Confidence 999999999998754321 234568888899998888776544
No 119
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.58 E-value=9.5e-15 Score=125.82 Aligned_cols=106 Identities=20% Similarity=0.252 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhH
Q 007923 41 ITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDP 120 (585)
Q Consensus 41 ~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~ 120 (585)
..+.+.+++.|.+++.++. +|||+|.++ |+.|+|||+||++||+||++||.+.. .. +...++.+++
T Consensus 8 ~~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~~f~~~~----~~------i~l~~~~~~~ 73 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGL---LCDCTFVVD-GVHFKAHKAVLAACSEYFKMLFVDQK----DV------VHLDISNAAG 73 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHHHCC----SG------GGGGGCCHHH
T ss_pred chHHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEehhHHHHHHcCHHHHHHHcCCC----CE------EEeCCCCHHH
Confidence 4678899999999999999 999999998 99999999999999999999998631 22 3334568889
Q ss_pred HHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 121 LVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 121 ~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
|..+|+|+|||++.++.+ .+...|..|..++..++.+...
T Consensus 74 f~~ll~~~Ytg~~~i~~~---------------------~~~~ll~~A~~l~i~~L~~~C~ 113 (119)
T 2q81_A 74 LGQVLEFMYTAKLSLSPE---------------------NVDDVLAVATFLQMQDIITACH 113 (119)
T ss_dssp HHHHHHHHHHSCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCccCHH---------------------HHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999998764322 1245678888888888776543
No 120
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=123.80 Aligned_cols=108 Identities=21% Similarity=0.264 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.+.+.|.+++.++. +|||+|.++ |+.|+|||+||++|||||++||.+.. ...+.+ +..++.+++|
T Consensus 4 ~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l----~~~~~~~~~f 72 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGF---LCDCTIVIG-EFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFL----DQSQVKADGF 72 (116)
T ss_dssp HHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHTTCC---CSCEEC----CTTTCCHHHH
T ss_pred hHHHHHHHHHHHHHhcCC---CCcEEEEEC-CEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEe----ecCCCCHHHH
Confidence 567889999999999999 999999998 99999999999999999999998751 122222 2236788999
Q ss_pred HHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 122 VAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
..+|+|+|+|++.++.+ .+...|..|..++...+.+...
T Consensus 73 ~~ll~~~Yt~~~~~~~~---------------------~v~~ll~~A~~~~i~~L~~~C~ 111 (116)
T 2vpk_A 73 QKLLEFIYTGTLNLDSW---------------------NVKEIHQAADYLKVEEVVTKCK 111 (116)
T ss_dssp HHHHHHHHHSCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHH---------------------HHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999998764322 2345678888888888776554
No 121
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.57 E-value=9.3e-15 Score=130.24 Aligned_cols=114 Identities=20% Similarity=0.299 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChh
Q 007923 40 DITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFD 119 (585)
Q Consensus 40 ~~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~ 119 (585)
...+.+.|.+.|.+++.++. ||||+|.|+ |+.|+|||+||++|||||++||.+.+.+... -...+...++.++
T Consensus 27 ~~~h~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~---~~~~I~l~~v~~~ 99 (144)
T 2ppi_A 27 DPQHAARLLRALSSFREESR---FCDAHLVLD-GEEIPVQKNILAAASPYIRTKLNYNPPKDDG---STYKIELEGISVM 99 (144)
T ss_dssp CTTHHHHHHHHHHHTTC--C---CCCEEEEET-TEEEEECHHHHHHHCHHHHHHHHHCC--------CCCEEECCSSCHH
T ss_pred CcchHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEehHHHHHHHcCHHHHHHHcCCCccccC---CCcEEEeCCCCHH
Confidence 44678889999999999999 999999998 9999999999999999999999876543110 0112334467888
Q ss_pred HHHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 120 PLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 120 ~~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
+|..+|+|+|||++.++.+ .+...|..|..++...+.+...
T Consensus 100 ~f~~lL~fiYtg~~~i~~~---------------------~v~~ll~~A~~l~i~~L~~~C~ 140 (144)
T 2ppi_A 100 VMREILDYIFSGQIRLNED---------------------TIQDVVQAADLLLLTDLKTLCC 140 (144)
T ss_dssp HHHHHHHHHTTSCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHH---------------------HHHHHHHHHHHhCcHHHHHHHH
Confidence 9999999999998754321 2345678888888888777654
No 122
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.56 E-value=1.7e-14 Score=127.73 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccc-cccChhH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRD-YEVGFDP 120 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~-~~v~~~~ 120 (585)
.+.+.+++.|.+++.++. ||||+|.|+ |+.|+|||+||++||+||++||.+.+.+. .. +.. .++.+++
T Consensus 18 ~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~~~~~e~-~~------i~l~~~v~~~~ 86 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKDV---LCDVTVLVE-GQRFRAHRSVLAACSSYFHSRIVGQTDAE-LT------VTLPEEVTVKG 86 (138)
T ss_dssp SHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHTTCCCTT-EE------EECCTTSCHHH
T ss_pred chHHHHHHHHHHHHhhCC---CcCeEEEEC-CEEEechHHHHHHcCHHHHHHHhcCCCCC-ce------EEeCCCCCHHH
Confidence 678889999999999999 999999998 99999999999999999999999775432 12 222 3678899
Q ss_pred HHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHh
Q 007923 121 LVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQR 182 (585)
Q Consensus 121 ~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~ 182 (585)
|..+|+|+|||++.++.+ .+...|..|..++..++.+...+
T Consensus 87 ~~~lL~~~Ytg~~~i~~~---------------------~v~~ll~~A~~~~i~~L~~~C~~ 127 (138)
T 2z8h_A 87 FEPLIQFAYTAKLILSKD---------------------NVDEVCRCVEFLSVHNIEESCFQ 127 (138)
T ss_dssp HHHHHHHHHHSCCCCCTT---------------------THHHHHHHHHHHTCGGGHHHHHH
T ss_pred HHHHHHHhcCCCcccCHH---------------------HHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999998764321 23456788888888876665543
No 123
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.56 E-value=1.6e-14 Score=124.84 Aligned_cols=105 Identities=15% Similarity=0.186 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.+.+.|.+++.++. +|||+|.++ |+.|+|||+||++|||||++||.+.. .. +...++.+++|
T Consensus 10 ~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~~~~----~~------i~l~~~~~~~f 75 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAGT---LCDVVIMVD-SQEFHAHRTVLACTSKMFEILFHRNS----QH------YTLDFLSPKTF 75 (121)
T ss_dssp THHHHHHHHHHHHHHHTT---TCCEEEEES-SCEEEECHHHHHHHCHHHHHHTTSCC----SE------EEECSSCHHHH
T ss_pred chHHHHHHHHHHHHhcCC---CCCEEEEEC-CEEEehhHHHHhhcCHHHHHHHcCCC----cE------EEeCCCCHHHH
Confidence 467889999999999999 999999998 99999999999999999999998641 23 33346788999
Q ss_pred HHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 122 VAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
..+|+|+|||++.++.+ .+...+..|..++..++.+...
T Consensus 76 ~~ll~~~Ytg~~~~~~~---------------------~~~~ll~~A~~~~i~~L~~~c~ 114 (121)
T 1buo_A 76 QQILEYAYTATLQAKAE---------------------DLDDLLYAAEILEIEYLEEQCL 114 (121)
T ss_dssp HHHHHHHHHSCCCCCGG---------------------GHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHhhcCCCcCCCHH---------------------HHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999998754321 2345678888888887766543
No 124
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.55 E-value=4.6e-15 Score=129.06 Aligned_cols=87 Identities=18% Similarity=0.207 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccc-cChh
Q 007923 41 ITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYE-VGFD 119 (585)
Q Consensus 41 ~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~-v~~~ 119 (585)
..+.+.|.+.|.+++.++. ||||+|.|+ |+.|+|||+||++||+||++||.+...+ ... +...+ +.++
T Consensus 13 ~~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~------i~l~~~~~~~ 81 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKDI---LCDVTLIVE-RKEFRAHRAVLAACSEYFWQALVGQTKN-DLV------VSLPEEVTAR 81 (125)
T ss_dssp SSHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHBHHHHHHHTTCCCS-SCE------EECCTTCCHH
T ss_pred HHHHHHHHHHHHHHHhcCC---ccceEEEEC-CEEEechHHHHHHcCHHHHHHhcCCCCC-CcE------EEeCCCCCHH
Confidence 3678889999999999999 999999998 9999999999999999999999876543 122 33334 7889
Q ss_pred HHHHHHHHHhcCCccCCCC
Q 007923 120 PLVAVLAYLYCGKVRPFPI 138 (585)
Q Consensus 120 ~~~~lL~ylYtg~l~~~~e 138 (585)
+|..+|+|+|||++.++.+
T Consensus 82 ~f~~~l~~iYtg~~~~~~~ 100 (125)
T 3ohu_A 82 GFGPLLQFAYTAKLLLSRE 100 (125)
T ss_dssp HHHHHHHHHTTSEEEECTT
T ss_pred HHHHHHHhHcCCceEECHH
Confidence 9999999999998865443
No 125
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.53 E-value=8.9e-15 Score=126.98 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccc-cccChhH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRD-YEVGFDP 120 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~-~~v~~~~ 120 (585)
.+.+.+.+.|.+++.++. +|||+|.|+ |+.|+|||+||++|||||++||.+.+.+. .. +.. .++.+++
T Consensus 11 ~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~------i~l~~~v~~~~ 79 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDV---LCDVTIFVE-GQRFRAHRSVLAACSSYFHSRIVGQADGE-LN------ITLPEEVTVKG 79 (124)
T ss_dssp SHHHHHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHBHHHHHHHTTC---C-EE------EECCTTSCHHH
T ss_pred chHHHHHHHHHHHHhcCC---CcCEEEEEC-CEEEecHHHHHHHcCHHHHHHHcCCCCCC-ce------EeecCCcCHHH
Confidence 467789999999999999 999999998 99999999999999999999999775432 12 222 3678899
Q ss_pred HHHHHHHHhcCCccCC
Q 007923 121 LVAVLAYLYCGKVRPF 136 (585)
Q Consensus 121 ~~~lL~ylYtg~l~~~ 136 (585)
|..+|+|+|||++.++
T Consensus 80 f~~lL~~iYtg~~~i~ 95 (124)
T 2ihc_A 80 FEPLIQFAYTAKLILS 95 (124)
T ss_dssp HHHHHHHHHHSEEEEE
T ss_pred HHHHHHHhcCCCcccC
Confidence 9999999999987644
No 126
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.53 E-value=1.1e-14 Score=124.68 Aligned_cols=80 Identities=25% Similarity=0.404 Sum_probs=69.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChh
Q 007923 40 DITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFD 119 (585)
Q Consensus 40 ~~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~ 119 (585)
+..+.+.+.+.|.+++.++. ||||+|.|+ |+.|+|||+||++||+||++||.+.. .. +...++.++
T Consensus 11 ~~~~~~~l~~~l~~~~~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~~F~~~f~~~~----~~------i~l~~~~~~ 76 (116)
T 3fkc_A 11 DIQYSGSLLNSLNEQRGHGL---FCDVTVIVE-DRKFRAHKNILSASSTYFHQLFSVAG----QV------VELSFIRAE 76 (116)
T ss_dssp CTTHHHHHHHHHHHHHHHTT---TCCEEEEET-TEEEEECHHHHHHHCHHHHHHTTSCC----SE------EEECSSCHH
T ss_pred CccHHHHHHHHHHHHHhcCC---ceeEEEEEC-CEEEehhHHHHHHcCHHHHHHHcCCC----CE------EEeCCCCHH
Confidence 34578889999999999999 999999998 99999999999999999999998651 22 344567889
Q ss_pred HHHHHHHHHhcCCc
Q 007923 120 PLVAVLAYLYCGKV 133 (585)
Q Consensus 120 ~~~~lL~ylYtg~l 133 (585)
+|..+|+|+|||++
T Consensus 77 ~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 77 IFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHhhcCCCc
Confidence 99999999999987
No 127
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.51 E-value=3.1e-14 Score=144.29 Aligned_cols=144 Identities=17% Similarity=0.310 Sum_probs=98.5
Q ss_pred CCcccCCCccc--eeeecccCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcc
Q 007923 9 DSNEISNNSRT--SCVAAAANTESFYSSEPVNSDITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSR 86 (585)
Q Consensus 9 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaar 86 (585)
.++++.||+.+ |.|.+..+............-..+.+.|.++|.+++.++. +|||+|.|+ |+.|+|||+|||+|
T Consensus 121 ~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~~~~~~p~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~~Hk~vLaa~ 196 (312)
T 3hqi_A 121 ANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSR---FTDCCLCVA-GQEFQAHKAILAAR 196 (312)
T ss_dssp GGCCCGGGCEEEEEEEEEEEECCCEECCCCCSSCCCCCCCHHHHHHHHHHTTC---SCCEEEEET-TEEEEECHHHHHHH
T ss_pred ccCeecCCEEEEEEEEEEEeccccccccccccccCCCCchHHHHHHHHHhCCC---CCceEEEEC-CEEEeHHHHHHHHc
Confidence 45789999988 6566542110101110101111234568999999999999 999999998 99999999999999
Q ss_pred cHHHHHhhcCCCCCCC-CcccccccccccccChhHHHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHH
Q 007923 87 SGFFKNVFAGTGKQRG-PKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVL 165 (585)
Q Consensus 87 s~~f~~lf~~~~~~~~-~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L 165 (585)
||||++||.+.+.+.. .. +...++.+++|..+|+|+|+|.+.... +.+...|
T Consensus 197 S~~F~~~f~~~~~e~~~~~------i~l~~~~~~~f~~~L~~iYt~~~~~~~---------------------~~~~~ll 249 (312)
T 3hqi_A 197 SPVFSAMFEHEMEESKKNR------VEINDVEPEVFKEMMCFIYTGKAPNLD---------------------KMADDLL 249 (312)
T ss_dssp CHHHHHHTTC-----CCSE------EEECSSCHHHHHHHHHHHHHSCCTTHH---------------------HHHHHHH
T ss_pred CHHHHHHhccCccccCCce------EEecCCCHHHHHHHHHhhcCCCCCChH---------------------HHHHHHH
Confidence 9999999998765443 33 334456888999999999999864321 2235568
Q ss_pred HHHHhcChhHHHHHHHhh
Q 007923 166 YVSFAFQVPELVALYQRH 183 (585)
Q Consensus 166 ~~A~~~~~~elv~~ll~~ 183 (585)
.+|-.++...+.+...+.
T Consensus 250 ~~A~~~~~~~l~~~c~~~ 267 (312)
T 3hqi_A 250 AAADKYALERLKVMCEDA 267 (312)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHH
Confidence 888889888876654433
No 128
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.48 E-value=7.4e-14 Score=128.54 Aligned_cols=107 Identities=21% Similarity=0.390 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHH
Q 007923 46 ILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVL 125 (585)
Q Consensus 46 ~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL 125 (585)
.|+.+|.+++.++. ||||+|.|+ |+.|+|||+||+++|+||++||.+.+.+... ..+...++.+++|..+|
T Consensus 20 ~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~-----~~i~l~~~~~~~f~~~l 90 (172)
T 3htm_A 20 RLADELGGLWENSR---FTDCCLCVA-GQEFQAHKAILAARSPVFSAMFEHEMEESKK-----NRVEINDVEPEVFKEMM 90 (172)
T ss_dssp CHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHHSCCCGGGT-----TEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCC---CcceEEEEC-CEEEEeeHHHHHHcCHHHHHHHccCccccCC-----CeEEecCCCHHHHHHHH
Confidence 48899999999999 999999998 9999999999999999999999977544321 12344467889999999
Q ss_pred HHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHh
Q 007923 126 AYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQR 182 (585)
Q Consensus 126 ~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~ 182 (585)
+|+|+|++.+.. +.+...|..|..++..++.+...+
T Consensus 91 ~~~Yt~~~~~~~---------------------~~~~~ll~~A~~~~~~~l~~~c~~ 126 (172)
T 3htm_A 91 CFIYTGKAPNLD---------------------KMADDLLAAADKYALERLKVMCED 126 (172)
T ss_dssp HHHHHSCCTTGG---------------------GTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhCCCCCCcH---------------------HHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999999875322 123456788888888887665443
No 129
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.47 E-value=5.3e-14 Score=122.96 Aligned_cols=84 Identities=20% Similarity=0.368 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHH
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPL 121 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~ 121 (585)
.+.+.+.+.|.+++.++. ||||+|.|+ |+.|+|||+||++||+||++||.+. ....+.+. .++.+++|
T Consensus 15 ~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~-----~~~~~~~f 82 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGL---YCDVSVVVK-GHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELP-----AAVQPQSF 82 (129)
T ss_dssp THHHHHHHHHHHHHHTTC---SCCEEEEET-TEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECC-----TTCCHHHH
T ss_pred cHHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEEC-----CCCCHHHH
Confidence 567789999999999999 999999998 9999999999999999999999865 11233221 26788999
Q ss_pred HHHHHHHhcCCccCCC
Q 007923 122 VAVLAYLYCGKVRPFP 137 (585)
Q Consensus 122 ~~lL~ylYtg~l~~~~ 137 (585)
..+|+|+|||++.++.
T Consensus 83 ~~ll~~iYtg~~~i~~ 98 (129)
T 3ga1_A 83 QQILSFCYTGRLSMNV 98 (129)
T ss_dssp HHHHHHHHHSEEECCT
T ss_pred HHHHHHHhCCccccCH
Confidence 9999999999886544
No 130
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.46 E-value=7.6e-14 Score=118.14 Aligned_cols=97 Identities=22% Similarity=0.387 Sum_probs=71.9
Q ss_pred HHhcCCCCcccceEEEecCC----CeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHh
Q 007923 54 IFESQDFDYFTDAKIVLSTG----REVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLY 129 (585)
Q Consensus 54 l~~~~~~~~~~Dv~i~v~~~----~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylY 129 (585)
|+.++. ||||+|.|+ | +.|+|||+||++|||||++||.+.+.+.... +...++.+++|..+|+|+|
T Consensus 2 l~~~~~---~~Dv~l~v~-~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~------i~l~~~~~~~f~~~l~~iY 71 (109)
T 2vkp_A 2 MFNNEL---MADVHFVVG-PPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSE------IHIPDVEPAAFLILLKYMY 71 (109)
T ss_dssp CTTCCT---TCCEEEEES-STTSCEEEEECHHHHHHHCHHHHHHHC------CCE------EEETTSCHHHHHHHHHHHH
T ss_pred cccCCC---cccEEEEEC-CCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCe------EEeCCCCHHHHHHHHHHHc
Confidence 566777 999999998 5 8999999999999999999999876554333 3344678889999999999
Q ss_pred cCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 130 CGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 130 tg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
+|++.++.+ .+...|..|..++.+.+.+...
T Consensus 72 t~~~~~~~~---------------------~~~~ll~~A~~~~~~~L~~~c~ 102 (109)
T 2vkp_A 72 SDEIDLEAD---------------------TVLATLYAAKKYIVPALAKACV 102 (109)
T ss_dssp HCCCCCCTT---------------------THHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCccCCHH---------------------HHHHHHHHHHHhCcHHHHHHHH
Confidence 998764331 2245677888888887666543
No 131
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.46 E-value=6.7e-14 Score=124.96 Aligned_cols=109 Identities=21% Similarity=0.385 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHH
Q 007923 45 RILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAV 124 (585)
Q Consensus 45 ~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~l 124 (585)
+.|..+|.+++.++. +|||+|.++ |+.|+|||+||++||+||++||.+.+.+.. ...+...++.+++|..+
T Consensus 10 ~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~-----~~~i~l~~~~~~~~~~~ 80 (145)
T 4eoz_A 10 CRLADELGGLWENSR---FTDCCLCVA-GQEFQAHKAILAARSPVFSAMFEHEMEESK-----KNRVEINDVEPEVFKEM 80 (145)
T ss_dssp CCHHHHHHHHHHHTC---SCCEEEEET-TEEEEECHHHHHHHCHHHHHHHHSSSHHHH-----HTEEEECSSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCC---CcceEEEEC-CEEEEeehHHHHHcCHHHHHHHcCCCcCCC-----CceEEecCCCHHHHHHH
Confidence 348999999999999 999999998 999999999999999999999987643221 12344446788999999
Q ss_pred HHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923 125 LAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH 183 (585)
Q Consensus 125 L~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~ 183 (585)
|+|+|+|++.++. +.+...|..|..++..++.+...+.
T Consensus 81 l~~~Y~~~~~~~~---------------------~~~~~ll~~A~~~~~~~l~~~c~~~ 118 (145)
T 4eoz_A 81 MCFIYTGKAPNLD---------------------KMADDLLAAADKYALERLKVMCEDA 118 (145)
T ss_dssp HHHHHHSCCTTGG---------------------GTHHHHHHHHHHTTCHHHHHHHHCC
T ss_pred HHhhccCccCCcH---------------------HHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999875321 1234567888888988877766544
No 132
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.43 E-value=2.9e-13 Score=133.02 Aligned_cols=113 Identities=19% Similarity=0.288 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhH
Q 007923 41 ITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDP 120 (585)
Q Consensus 41 ~~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~ 120 (585)
..+.+.+++.|.+++.++. ||||+|.|+ |+.|+|||+||+++||||++||.+++.+... -...+...++.+++
T Consensus 12 ~~~~~~l~~~l~~l~~~~~---~~Dv~l~v~-~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~---~~~~i~l~~v~~~~ 84 (256)
T 3hve_A 12 PQHAARLLRALSSFREESR---FCDAHLVLD-GEEIPVQKNILAAASPYIRTKLNYNPPKDDG---STYKIELEGISVMV 84 (256)
T ss_dssp TTTHHHHHHHHHTCCC--C---CCCEEEEET-TEEEEECHHHHHTTCHHHHHTC--------------CEEECSSCCHHH
T ss_pred hHHHHHHHHHHHHHHhcCC---CcceEEEEC-CEEEechHHHHHHcCHHHHHHhCCCCCcccC---CCCeEEeCCCCHHH
Confidence 3567889999999999999 999999998 9999999999999999999999876541100 11224445678899
Q ss_pred HHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 121 LVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 121 ~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
|..+++|+|||++.++.+ .+...|..|..++..++.+...
T Consensus 85 f~~ll~~~Yt~~~~i~~~---------------------~v~~ll~~A~~l~i~~l~~~c~ 124 (256)
T 3hve_A 85 MREILDYIFSGQIRLNED---------------------TIQDVVQAADLLLLTDLKTLCC 124 (256)
T ss_dssp HHHHHHHHHHSCCCCC-C---------------------CHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHhhccCCCCcccHh---------------------HHHHHHHHHHHHChHHHHHHHH
Confidence 999999999998764322 1345678888888888666543
No 133
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.41 E-value=3.4e-13 Score=134.29 Aligned_cols=116 Identities=22% Similarity=0.311 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccceEEEec--CCCeeechhhhhhcccHHHHHhhcCCCCCCC-CcccccccccccccCh
Q 007923 42 TALRILSKTLETIFESQDFDYFTDAKIVLS--TGREVPVHRCILSSRSGFFKNVFAGTGKQRG-PKFELKELVRDYEVGF 118 (585)
Q Consensus 42 ~~~~~l~~~l~~l~~~~~~~~~~Dv~i~v~--~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~-~~~~l~~li~~~~v~~ 118 (585)
.+.+.+++.|.+++.++. ||||+|.|+ +|+.|+|||+||+++|+||++||.+++.+.. ..+.+.++....++++
T Consensus 14 ~h~~~ll~~l~~l~~~~~---~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~ 90 (279)
T 3i3n_A 14 SHCSELSWRQNEQRRQGL---FCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEP 90 (279)
T ss_dssp THHHHHHHHHHHHHHHTT---TCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCH
T ss_pred hHHHHHHHHHHHHHhcCC---CCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCH
Confidence 577889999999999999 999999995 3899999999999999999999998776543 4555554444447899
Q ss_pred hHHHHHHHHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHH
Q 007923 119 DPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQ 181 (585)
Q Consensus 119 ~~~~~lL~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll 181 (585)
++|..+++|+|||++.++.+ .+...|..|..++..++.+...
T Consensus 91 ~~f~~ll~~~Ytg~~~i~~~---------------------~v~~ll~~A~~l~i~~L~~~c~ 132 (279)
T 3i3n_A 91 DTVEAVIEYMYTGRIRVSTG---------------------SVHEVLELADRFLLIRLKEFCG 132 (279)
T ss_dssp HHHHHHHHHHHHSEEEEETT---------------------THHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhhCcCCcccCHH---------------------HHHHHHHHHHHHCcHHHHHHHH
Confidence 99999999999998754321 2345678888888888666543
No 134
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.35 E-value=7.1e-13 Score=113.75 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhcCCCCcccceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHH
Q 007923 46 ILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVL 125 (585)
Q Consensus 46 ~l~~~l~~l~~~~~~~~~~Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL 125 (585)
.+++.|. +.++. ||||+|.|+ |+.|+|||+|||++|+||++ . ...+...++.+++|..+|
T Consensus 18 ~~l~~l~--r~~~~---~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~----~----------~~~i~l~~v~~~~f~~ll 77 (119)
T 3m5b_A 18 RLVQLAA--RLRPA---LCDTLITVG-SQEFPAHSLVLAGVSQQLGR----R----------GQWALGEGISPSTFAQLL 77 (119)
T ss_dssp HHHHHHH--HHTTT---TCCEEEEET-TEEEEECHHHHHTTCGGGCC----C----------EEEECCSSCCHHHHHHHH
T ss_pred HHHHHHH--HhcCC---CcceEEEEC-CEEEeeEHHHHHHcCHHHhc----C----------CCEEEeCCCCHHHHHHHH
Confidence 4555554 45677 999999998 99999999999999999974 1 122445568899999999
Q ss_pred HHHhcCCccCCCCccccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923 126 AYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH 183 (585)
Q Consensus 126 ~ylYtg~l~~~~e~v~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~ 183 (585)
+|+|||++.++.+ .+...|..|..++...+.+...+.
T Consensus 78 ~fiYtg~~~i~~~---------------------~v~~ll~aA~~l~i~~l~~~C~~~ 114 (119)
T 3m5b_A 78 NFVYGESVELQPG---------------------ELRPLQEAARALGVQSLEEACWRA 114 (119)
T ss_dssp HHHTTCCEEECGG---------------------GHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCCCcCcCHH---------------------HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999998754322 234567788888888887766543
No 135
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.79 E-value=2.8e-05 Score=63.43 Aligned_cols=58 Identities=28% Similarity=0.320 Sum_probs=44.8
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCC--CCCCCcccccccccccccChhHHHHHHHHHh
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTG--KQRGPKFELKELVRDYEVGFDPLVAVLAYLY 129 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~--~~~~~~~~l~~li~~~~v~~~~~~~lL~ylY 129 (585)
|+++-.||+.|++||.| |+.|++|++||.+.. .+. -.+.++..+|...++..+++|+|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~-----~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN-----ETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC-------------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc-----CCCceECCCCCHHHHHHHHHHHH
Confidence 56666569999999999 999999999998632 121 12346777889999999999999
No 136
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.65 E-value=0.00015 Score=64.92 Aligned_cols=63 Identities=19% Similarity=0.091 Sum_probs=48.6
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcC-CCC-CCCCcccccccccccccChhHHHHHHHHHhcCCcc
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAG-TGK-QRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVR 134 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~-~~~-~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~ 134 (585)
|++...||+.|++||.+ |+.|+||+.||.+ +.. +.. ...++..+|...++..+++|+|+++-.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~-----~~~Ipl~~V~~~iL~kViey~~~h~~~ 67 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGD-----DDPVPLPNVNAAILKKVIQWCTHHKDD 67 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-----------CEECTTSCHHHHHHHHHHHHHTTTC
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccccc-----CCCcCCCCccHHHHHHHHHHHHHcCcC
Confidence 66765559999999999 8999999999986 322 111 124677789999999999999999844
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.18 E-value=0.014 Score=50.77 Aligned_cols=58 Identities=22% Similarity=0.138 Sum_probs=48.4
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCc
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKV 133 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l 133 (585)
|++...||+.|.+||.+ |..|++++.||.+.. .+.++..+|...++..+++|+|+.+-
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---------~~~Ipl~~V~~~iL~kVieyc~~h~~ 61 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---------MDPVPLPNVNAAILKKVIQWCTHHKD 61 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---------CSSEECTTCCHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---------CCceecCCcCHHHHHHHHHHHHHhcc
Confidence 67777669999999998 889999999997531 23477778999999999999999874
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=94.89 E-value=0.0065 Score=54.14 Aligned_cols=60 Identities=15% Similarity=0.050 Sum_probs=27.1
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCcc
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVR 134 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~ 134 (585)
|++...||..|.+||.+ |..|++|+.||.+... .+.++..+|...++..+++|+|+.+-.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~--------~~~Ipl~~V~~~iL~kVieyc~~h~~~ 65 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV--------DNGVPLPNVTSKILAKVIEYCKRHVEA 65 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------------CCTTSCHHHHHHHHHC-------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC--------CCceeCCcCcHHHHHHHHHHHHHcccC
Confidence 55665459999999998 8899999999976421 124777789999999999999998743
No 139
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=94.61 E-value=0.055 Score=43.77 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=47.6
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGK 132 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~ 132 (585)
|++.-.||..|.++|.+ |..|.+++.||.++. +.. .+.++..+|...++..+++|+|.-+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~-----~~~Iplp~V~~~iL~kVieyc~~h~ 65 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RES-----KGRIELKQFDSHILEKAVEYLNYNL 65 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTC-----TTEEEETTSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccC-----CCceecCCcCHHHHHHHHHHHHHhc
Confidence 67777569999999997 888999999998642 111 1247777899999999999998854
No 140
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=94.41 E-value=0.058 Score=43.35 Aligned_cols=63 Identities=25% Similarity=0.245 Sum_probs=46.3
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGK 132 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~ 132 (585)
|++.-.||..|.++|.+ |..|++++.||.+.... ...-...++..+|...++..+++|+|.-+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~---~e~~~~~Ipl~~V~~~iL~kVieyc~~h~ 65 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF---AENETNEVNFREIPSHVLSKVCMYFTYKV 65 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC-----------CEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCc---ccccCCceeCCCCCHHHHHHHHHHHHHcc
Confidence 56666569999999997 88899999999863210 00011247778899999999999998754
No 141
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=92.54 E-value=0.38 Score=39.32 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=62.5
Q ss_pred ceEEEecCCCeeechhhhhhccc-HHHHHhhcCCCCCCCCcccc-ccccc--ccccChhHHHHHHHHHhcCCccCCCCcc
Q 007923 65 DAKIVLSTGREVPVHRCILSSRS-GFFKNVFAGTGKQRGPKFEL-KELVR--DYEVGFDPLVAVLAYLYCGKVRPFPIGV 140 (585)
Q Consensus 65 Dv~i~v~~~~~~~~Hr~iLaars-~~f~~lf~~~~~~~~~~~~l-~~li~--~~~v~~~~~~~lL~ylYtg~l~~~~e~v 140 (585)
=|+|.|+ |+.|...+..|.... .+|..||.+.. .+.. .+--. ..+-....|..+|.|+.+|++..+.+ +
T Consensus 7 ~v~LNVG-G~~f~t~~~TL~~~p~s~L~~~~~~~~-----~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~p~~-~ 79 (107)
T 3drz_A 7 WVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQADP-----DLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKD-L 79 (107)
T ss_dssp EEEEEET-TEEEEEEHHHHTSSTTSHHHHHHTTCG-----GGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCCCTT-S
T ss_pred EEEEEEC-CEEEEECHHHHhcCCCcchhHHHhcCC-----CCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCCCCC-C
Confidence 3789998 999999999998764 47888987541 1110 00000 11457789999999999998754321 1
Q ss_pred ccccccccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923 141 CVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH 183 (585)
Q Consensus 141 ~~cl~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~ 183 (585)
|. ...+.-|..++..++++.+-++
T Consensus 80 --~~-----------------~~l~~Ea~fy~l~~L~~~l~~~ 103 (107)
T 3drz_A 80 --AE-----------------EGVLEEAEFYNITSLIKLVKDK 103 (107)
T ss_dssp --CH-----------------HHHHHHHHHHTCHHHHHHHHHH
T ss_pred --CH-----------------HHHHHHHHHCCCHHHHHHHHHH
Confidence 11 1245677788999998887543
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=84.44 E-value=4.1 Score=36.14 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=47.4
Q ss_pred ceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCcc
Q 007923 65 DAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVR 134 (585)
Q Consensus 65 Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~ 134 (585)
-|++.-.||..|.+++.+ |..|.+++.|+.....+.. ...-...++..+|...++..+++|++.-+-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~-~~~~~~~IplpnV~s~iL~kVieyc~~h~~~ 75 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDD-EDDDEIVMPVPNVRSSVLQKVIEWAEHHRDS 75 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC------------CEEECTTCCHHHHHHHHHHHHHTTTC
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccc-cccCCCceeeCCCCHHHHHHHHHHHHHcccC
Confidence 466776679999999998 7789999999975422100 0011134777789999999999999886543
No 143
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=82.27 E-value=2.2 Score=35.04 Aligned_cols=63 Identities=25% Similarity=0.244 Sum_probs=45.6
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGK 132 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~ 132 (585)
|++.-.||..|.+.|.+ |..|..++.|+.+..... ..-...++..+|...++..+++|++.-+
T Consensus 19 v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~---e~~~~~IplpnV~s~iL~kVieyc~~h~ 81 (112)
T 1vcb_B 19 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFA---ENETNEVNFREIPSHVLSKVCMYFTYKV 81 (112)
T ss_dssp EEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC-----------CEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcc---cccCCceeCCCCCHHHHHHHHHHHHHhh
Confidence 67776569999999995 678999999997532100 0011247778899999999999997754
No 144
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=68.40 E-value=9.9 Score=34.54 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=60.3
Q ss_pred ceEEEecCCCeeechhhhhhccc-HHHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCccCCCCccccc
Q 007923 65 DAKIVLSTGREVPVHRCILSSRS-GFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVC 143 (585)
Q Consensus 65 Dv~i~v~~~~~~~~Hr~iLaars-~~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~e~v~~c 143 (585)
=|+|.|+ |..|..-+..|.... .+|..||.+...-. ...+-... -..+-....|..+|.|+.+|++..+.+ ++
T Consensus 13 ~V~LNVG-G~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~-~~~De~ge-yFIDRDP~~F~~ILnyLRtG~L~lP~~-~~-- 86 (202)
T 3drx_A 13 WVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQADPDLD-SDKDETGA-YLIDRDPTYFGPVLNYLRHGKLVINKD-LA-- 86 (202)
T ss_dssp EEEEEET-TEEEEEETTGGGSCTTSSTHHHHSCCCC-----BCTTCC-EEECSCSTTHHHHHHHHHHSCCCCCTT-SC--
T ss_pred EEEEEEC-CEEEEEeHHHHhCCCcchHHHHhcCccccC-cccCCCcc-EEecCChHHHHHHHHHhcCCccCCCCC-CC--
Confidence 3778998 999999999997653 37788887542100 00000000 011446679999999999998764322 11
Q ss_pred cccccccccccCCccchhhhHHHHHHhcChhHHHHHHHhh
Q 007923 144 VDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRH 183 (585)
Q Consensus 144 l~~~~~~~~~c~~~idf~~t~L~~A~~~~~~elv~~ll~~ 183 (585)
. ...+.-|..|+..++++.+.++
T Consensus 87 ~-----------------~~l~eEA~FygL~~Lv~~l~~~ 109 (202)
T 3drx_A 87 E-----------------EGVLEEAEFYNITSLIKLVKDK 109 (202)
T ss_dssp H-----------------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred H-----------------HHHHHHHHHCCcHHHHHHHHHH
Confidence 0 1245677888999988887543
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=49.83 E-value=11 Score=31.00 Aligned_cols=66 Identities=11% Similarity=0.083 Sum_probs=40.8
Q ss_pred eEEEecCCCeeechhhhhhcccH-HHHHhhcCCCCCCCCcccccccccccccChhHHHHHHHHHhcCCccCCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSG-FFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFP 137 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~-~f~~lf~~~~~~~~~~~~l~~li~~~~v~~~~~~~lL~ylYtg~l~~~~ 137 (585)
|+|.|+ |..|..-+..|..... ++..||.+.. .+.-..=.-..+-....|..+|.|+.+|++..+.
T Consensus 7 V~LNVG-G~~f~T~~~TL~~~P~s~L~~l~~~~~-----~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p~ 73 (115)
T 3kvt_A 7 VIINVG-GIRHETYKATLKKIPATRLSRLTEGML-----NYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPT 73 (115)
T ss_dssp EEEEET-TEEEEEEHHHHTTSCSSTTTTCCTTST-----TEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCS
T ss_pred EEEEEC-CEEEEecHHHHhcCCCccHHHHhcCCC-----CCCCCCCcEEEecChHHHHHHHHHhcCCCCCCCC
Confidence 789998 9999999988875422 3444554321 0100000001134667999999999999886543
No 146
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=41.07 E-value=9 Score=21.53 Aligned_cols=8 Identities=50% Similarity=0.638 Sum_probs=5.2
Q ss_pred cCCCCCCC
Q 007923 576 VRPRGGKR 583 (585)
Q Consensus 576 ~~~~~~~~ 583 (585)
.||||+||
T Consensus 19 epprkrkr 26 (28)
T 3ukw_C 19 EPPRKRKR 26 (28)
T ss_dssp SCCSSCCC
T ss_pred Ccchhhhc
Confidence 36777766
No 147
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=23.39 E-value=37 Score=19.26 Aligned_cols=10 Identities=40% Similarity=0.647 Sum_probs=7.0
Q ss_pred CCccCCCCCC
Q 007923 573 KSVVRPRGGK 582 (585)
Q Consensus 573 ~~~~~~~~~~ 582 (585)
.++.|||+|-
T Consensus 2 ptpKrpRgRp 11 (26)
T 2ezd_A 2 PTPKRPRGRP 11 (26)
T ss_dssp CSCCCCSSCC
T ss_pred CCCcCCCCCc
Confidence 4678888764
No 148
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=22.29 E-value=41 Score=26.62 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=37.0
Q ss_pred eEEEecCCCeeechhhhhhcccH-HHHHhhcCCCC--CCCCcccccccccccccChhHHHHHHHHHhc-CCccCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSG-FFKNVFAGTGK--QRGPKFELKELVRDYEVGFDPLVAVLAYLYC-GKVRPF 136 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~-~f~~lf~~~~~--~~~~~~~l~~li~~~~v~~~~~~~lL~ylYt-g~l~~~ 136 (585)
|+|.|+ |..|-..+..|...-. .+..||..... .....+ ..+-....|..+|.|+.+ |++..+
T Consensus 3 v~LNVG-G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~ey-------FiDRdp~~F~~ILnflR~~G~l~~p 69 (100)
T 1t1d_A 3 VVINVS-GLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEY-------FFDRNRPSFDAILYFYQSGGRLRRP 69 (100)
T ss_dssp EEEEET-TEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEE-------EECSCSTTHHHHHHHHHTTSCCCCC
T ss_pred EEEEEC-CEEEEeeHHHHhcCCCccccchhccccccCCCceeE-------EEcCChHHHHHHHHHHhcCCcccCC
Confidence 689998 9999998888854311 12222321000 000111 013466799999999999 887543
No 149
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=21.29 E-value=89 Score=25.73 Aligned_cols=64 Identities=17% Similarity=0.220 Sum_probs=38.5
Q ss_pred ceEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCccccccccc--ccccChhHHHHHHHHHhcCCccCC
Q 007923 65 DAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVR--DYEVGFDPLVAVLAYLYCGKVRPF 136 (585)
Q Consensus 65 Dv~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~--~~~v~~~~~~~lL~ylYtg~l~~~ 136 (585)
=|+|.|+ |..|..-+..|..... .+|.. .. +... ..+--. ..+-....|..+|.|+.+|++...
T Consensus 14 ~V~LNVG-G~~F~t~~~TL~~~p~---S~L~~-~~--~~~~-~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p 79 (124)
T 1s1g_A 14 LIVLNVS-GRRFQTWRTTLERYPD---TLLGS-TE--KEFF-FNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP 79 (124)
T ss_dssp EEEEEET-TEEEEEEHHHHTTSTT---SSTTS-SG--GGGT-BCSSSCSEEECSCHHHHHHHHHHHHHSCBCCC
T ss_pred EEEEEeC-CEEEEEeHHHHhcCCC---ceecc-cC--Cccc-ccCCCCcEEEcCChHHHHHHHHHHhcCCCCCC
Confidence 4889998 9999998888865321 12322 10 0000 000000 114567899999999999987643
No 150
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=20.44 E-value=73 Score=25.33 Aligned_cols=63 Identities=11% Similarity=0.115 Sum_probs=37.4
Q ss_pred eEEEecCCCeeechhhhhhcccHHHHHhhcCCCCCCCCccccccccc--ccccChhHHHHHHHHHhcCCccCC
Q 007923 66 AKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVR--DYEVGFDPLVAVLAYLYCGKVRPF 136 (585)
Q Consensus 66 v~i~v~~~~~~~~Hr~iLaars~~f~~lf~~~~~~~~~~~~l~~li~--~~~v~~~~~~~lL~ylYtg~l~~~ 136 (585)
|+|.|+ |..|..-+..|..... .|+.. ... .. ...+--. ..+-....|..+|.|+.+|++..+
T Consensus 2 V~LNVG-G~~f~t~~~TL~~~p~---s~L~~-~~~--~~-~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p 66 (105)
T 1nn7_A 2 IVLNVS-GTRFQTWQDTLERYPD---TLLGS-SER--DF-FYHPETQQYFFDRDPDIFRHILNFYRTGKLHYP 66 (105)
T ss_dssp EEEEET-TEEEEECHHHHHTSCS---SSTTS-GGG--GG-GEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCC
T ss_pred EEEEEC-CEEEEEeHHHHhcCCC---ccccc-cCC--cc-cccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCC
Confidence 689998 9999998888865321 12322 100 00 0000000 013466799999999999987543
No 151
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=20.15 E-value=84 Score=23.32 Aligned_cols=24 Identities=42% Similarity=0.451 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhh
Q 007923 536 RLLKRIRYMELQEVVSKAFNEDKEEF 561 (585)
Q Consensus 536 ~~~k~~~~~~l~~~l~~~~~~~~~~~ 561 (585)
++..+.|+.|||-++ |+|.+ |||-
T Consensus 33 rraqkhrlrelk~qv-k~Fad-kEeg 56 (96)
T 3gna_A 33 RRAQKHRLRELKIQV-KEFAD-KEEG 56 (96)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH-HHST
T ss_pred HHHHHHHHHHHHHHH-HHHHh-HhhC
Confidence 445578999999887 56665 4553
Done!