Citrus Sinensis ID: 007923


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MDNRNGFSDSNEISNNSRTSCVAAAANTESFYSSEPVNSDITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTVDLNEAPFKMQEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADDLNQLACPGNDTPEERLLKRIRYMELQEVVSKAFNEDKEEFDRSAISSSSSSKSVVRPRGGKRTH
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccHHHHHHHHccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHccccHHHHcccccHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccHHHHcccccccHHHHHHHHcHHHHHHHHcHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
************************************VNSDITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTVDLNEAPFKMQEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADDLNQLACPG******RLLKRIRYMELQEVVSKAFN******************************
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MDNRNGFSDSNEISNNSRTSCVAAAANTESFYSSEPVNSDITALRILSKTLETIFESQDFDYFTDAKIVLSTGREVPVHRCILSSRSGFFKNVFAGTGKQRGPKFELKELVRDYEVGFDPLVAVLAYLYCGKVRPFPIGVCVCVDDDACSHVACRPAVDFMVEVLYVSFAFQVPELVALYQRHLLDILDKVVADDILVVLSVAHMCGKACEKLLERCIEITVKSDIDIVTLDKTLPQHIVKQIIDLRVELSLHRSESCGFPDKHTKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGLADVNHRNSRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTLDGRKALQISKRLTKAADYYIPTEEGKTTPKDRLCIEILEQAERRDPLLREASHSFAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVIMDIVHLDGTLEFALDGIKTKKMAGAQRTTVDLNEAPFKMQEEHLNRMKALCRTVELGKRFFPRCSEVLNKIMDADDLNQLACPGNDTPEERLLKRIRYMELQEVVSKAFNEDKEEFDRSAISSSSSSKSVVRPRGGKRTH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Regulatory protein NPR1 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Key positive regulator of the SA-dependent signaling pathway that negatively regulates JA-dependent signaling pathway. Mediates the binding of TGA factors to the as-1 motif found in the pathogenesis-related PR-1 gene, leading to the transcriptional regulation of the gene defense. Controls the onset of systemic acquired resistance (SAR). Upon SAR induction, a biphasic change in cellular reduction potential occurs, resulting in reduction of the cytoplasmic oligomeric form to a monomeric form that accumulates in the nucleus and activates gene expression. Phosphorylated form is target of proteasome degradation.probableP93002

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 162-481,495-555
View the alignment between query and template
View the model in PyMOL
Template: 3I3N, chain A
Confidence level:very confident
Coverage over the Query: 42-138,160-181
View the alignment between query and template
View the model in PyMOL
Template: 3HQI, chain A
Confidence level:confident
Coverage over the Query: 9-137,159-183
View the alignment between query and template
View the model in PyMOL