Your job contains 1 sequence.
>007931
MSQFWKPGAEKPRLLDDEEGGVVFLSSSLSSASSIGYGYASIEKQRQRLPVYKYRTAILY
LVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMG
VKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIST
DILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSV
EGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEA
RTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS
GFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGI
PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT
GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA
AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVRNLIWML
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007931
(584 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1389 4.8e-142 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1384 1.6e-141 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1384 1.6e-141 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1379 5.5e-141 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1379 5.5e-141 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1379 5.5e-141 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1374 1.9e-140 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1374 1.9e-140 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1363 2.7e-139 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1357 1.2e-138 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 1336 2.0e-136 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1323 4.7e-135 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1206 2.7e-128 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 826 1.7e-125 2
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 1228 5.5e-125 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 806 3.5e-124 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 806 6.1e-124 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 806 6.3e-124 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 806 6.7e-124 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 806 7.2e-124 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 806 8.3e-124 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 806 9.9e-124 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 806 1.0e-123 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 806 1.1e-123 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 799 1.4e-123 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 804 5.7e-123 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 820 1.5e-121 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 820 1.5e-121 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 765 3.0e-121 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 751 3.2e-121 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 753 8.4e-121 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 782 1.6e-120 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 769 2.2e-120 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 764 3.2e-119 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 765 6.7e-119 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 764 6.7e-119 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 764 6.7e-119 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 764 6.7e-119 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 764 1.1e-118 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 760 2.6e-118 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1157 1.8e-117 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 732 5.4e-117 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 728 8.3e-117 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 776 9.2e-117 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1149 1.3e-116 1
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 1146 2.7e-116 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 711 2.1e-114 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 725 5.7e-114 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1124 5.8e-114 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 707 7.8e-114 2
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1121 1.2e-113 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1121 1.2e-113 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1121 1.2e-113 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1121 1.2e-113 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1121 1.2e-113 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1121 1.2e-113 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1119 1.9e-113 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1117 3.2e-113 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1117 3.2e-113 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 736 3.5e-113 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1113 8.4e-113 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 725 1.8e-112 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1105 5.9e-112 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 720 6.2e-112 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1090 2.3e-110 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1089 2.9e-110 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 695 1.1e-109 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1078 4.3e-109 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1076 7.0e-109 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1064 1.3e-107 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 675 3.5e-107 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 662 9.2e-107 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 662 3.3e-105 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 662 4.2e-105 2
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 1038 7.5e-105 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 662 1.1e-104 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 658 2.4e-104 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 642 4.1e-104 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 660 3.2e-103 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 648 9.1e-103 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 650 9.5e-103 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 632 7.7e-102 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 1007 1.4e-101 1
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 1005 2.3e-101 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1005 2.3e-101 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1002 4.9e-101 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 997 1.7e-100 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 994 3.4e-100 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 618 5.4e-100 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 975 3.5e-98 1
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 956 3.7e-96 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 490 3.7e-95 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 490 3.7e-95 3
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 495 2.5e-94 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 495 2.5e-94 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 922 1.8e-92 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 922 1.8e-92 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 914 1.0e-91 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 892 2.2e-89 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 890 3.6e-89 1
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
Identities = 282/578 (48%), Positives = 381/578 (65%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FWKPG+E P + ++ + + EKQRQRLPV+K+R ILYLV
Sbjct: 1 KFWKPGSEAPGVCEERD---LSTETTGSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLV 57
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E+ T +IVGETGSGK+TQIPQYL EAGWA G+VI TQPRR+A +VA+R
Sbjct: 58 ESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATSVATRVAEERGAF 117
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
YTIRF+D ++ T IKFLTDG+L+REMM DPLL KYSV+++DEAHER++ TDI
Sbjct: 118 LGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDI 177
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKI + R DLRLI++SAT++AK FF+ + G + IL+VEG
Sbjct: 178 AIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNES--GDASKDTC-----GILTVEG 230
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y PV DYV+A V TVL IH+ E GD+L FLTGQ++++ + LL E+ART
Sbjct: 231 RTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQART 290
Query: 303 SKKNS--SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF RKVV++TNIAETS+T+ G+V+V+D
Sbjct: 291 LSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDC 350
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
F K R YNP + IE+L+V PISKAS KC+RLYTEE F K +P +
Sbjct: 351 AFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEK-LPESTV 409
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+L++LG LD +LT P
Sbjct: 410 PEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLFALGGLDQYGRLTDPM 469
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI+TI+A++ IQ+I+V+ +K +FA
Sbjct: 470 GVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFA 529
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
AEGDH+T LN+Y+ F++ KSS WC +F+NY ++R
Sbjct: 530 VAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLR 567
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 278/578 (48%), Positives = 375/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FWKPG E P + EE V E+QRQ+LPV+K R ILYLV
Sbjct: 9 KFWKPGTEGPGVSISEERQSV-TENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLV 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQ+PQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T+ T IKFLTDG+L+REMM DPLLTKYSV+M+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A+ FF+ + R IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNE-------TSDPARDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY++A V TV+ IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNS--SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTEE F +++P +
Sbjct: 361 GFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAF-EQLPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL V+QLKALGID++L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+++V + + +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ F++ KSS WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVR 577
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 278/578 (48%), Positives = 375/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FWKPG E P + EE V E+QRQ+LPV+K R ILYLV
Sbjct: 9 KFWKPGTEGPGVSISEERQSV-TENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLV 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQ+PQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T+ T IKFLTDG+L+REMM DPLLTKYSV+M+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A+ FF+ + R IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNE-------TSDPARDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY++A V TV+ IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNS--SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTEE F +++P +
Sbjct: 361 GFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAF-EQLPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL V+QLKALGID++L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+++V + + +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ F++ KSS WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVR 577
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 277/578 (47%), Positives = 374/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FW+PG E P + EE + E+QRQ+LPV+K R ILYL+
Sbjct: 9 KFWRPGTEGPGVSISEERQSL-AENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLI 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +I+GETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D TN T IKFLTDG+L+REMM DPLLTKYS IM+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A+ FF+ R IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHND-------TSDPTRDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V TV+ IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L ILP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTEE F ++P +
Sbjct: 361 GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DQLPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+++V + + A +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ F++ K+S WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVR 577
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 279/578 (48%), Positives = 375/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FW+PG E P + EE + E+QRQ+LPV+K R ILYLV
Sbjct: 9 RFWRPGTEGPGVSISEERQSL-AENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLV 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T+ T IKFLTDG+L+REMM DPLLTKYS IM+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQR R DLRL+++SAT++A+ FF+ + R IL+VEG
Sbjct: 188 AIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNE-------TSDPTRDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V TV+ IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVVAP+S+AS KCYRLYTEE F K +P +
Sbjct: 361 GFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDK-LPQCTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G +VAE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V + + +FA
Sbjct: 480 GMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ F++ K+S WC ++F+NY ++R
Sbjct: 540 VEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIR 577
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 276/578 (47%), Positives = 374/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FW+PG E P + EE + E+QRQ+LPV+K R ILYL+
Sbjct: 9 KFWRPGTEGPGVSISEERQSL-AENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLI 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T+ T IKFLTDG+L+REMM DPLLTKYS IM+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A+ FF+ PR IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQND-------TSDPPRDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V TV+ IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTE+ F ++P +
Sbjct: 361 GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAF-DQLPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V + + +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ F++ K+S WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVR 577
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 278/578 (48%), Positives = 373/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FW+PG E P + EE + E+QRQ+LPV+K R ILYL+
Sbjct: 9 KFWRPGTEGPGVSISEERQSL-AENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLI 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A FF+ + R IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE-------TSDPARDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V TV+ IH E GD+L FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTEE F K +P +
Sbjct: 361 GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V + +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LNIY+ F++ K S WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVR 577
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 278/578 (48%), Positives = 373/578 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FW+PG E P + EE + E+QRQ+LPV+K R ILYL+
Sbjct: 9 KFWRPGTEGPGVSISEERQSL-AENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLI 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA R
Sbjct: 68 ENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A FF+ + R IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE-------TSDPARDTCVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V TV+ IH E GD+L FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV+D
Sbjct: 301 LARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
GF K R YNP + IE LVV P+S+AS KCYRLYTEE F K +P +
Sbjct: 361 GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTV 419
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT P
Sbjct: 420 PEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPL 479
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V + +FA
Sbjct: 480 GMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFA 539
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LNIY+ F++ K S WC ++F+NY +VR
Sbjct: 540 VEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVR 577
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1363 (484.9 bits), Expect = 2.7e-139, P = 2.7e-139
Identities = 276/580 (47%), Positives = 374/580 (64%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKYRTAILYLV 62
+FWKPG E P + EE E+QRQ+LPV+K R ILYLV
Sbjct: 9 KFWKPGTEGPGVSVSEERQSP-AESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLV 67
Query: 63 ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXX 122
E++ T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A +VA R
Sbjct: 68 ESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAV 127
Query: 123 XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI 182
Y IRF+D T+ T IKFLTDG+L+REMM DPLLT+YSV+M+DEAHER++ TDI
Sbjct: 128 LGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDI 187
Query: 183 LLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEG 242
+GLLKKIQ+ R DLRLI++SAT++A+ FF+ + G + IL+VEG
Sbjct: 188 AIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN--QNDTGDPSKDT-----SVILTVEG 240
Query: 243 RGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
R F V I Y++ PV DY+++ V T + IH E GDIL FLTGQ++++ + +L E+AR
Sbjct: 241 RTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA 300
Query: 303 SKKNS--SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
+ L +LP+Y+GL +Q +VF R RKV+++TN+AETS+T+ GI YV+D
Sbjct: 301 LSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDC 360
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYT--EEYFVKEIPAE 418
GF K R YNP + IE LVV P+SKAS KCYRLYT EE F K +P
Sbjct: 361 GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEK-LPQS 419
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
+PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD +LT
Sbjct: 420 TVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTE 479
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
P G ++AE PL PM +KM+L S GCS+EI+TI+A++ IQ+I++ + + +
Sbjct: 480 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRK 539
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
FA EGDH+T LN+Y+ F++ KSS WC ++F+NY +VR
Sbjct: 540 FAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVR 579
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
Identities = 271/538 (50%), Positives = 363/538 (67%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E+QRQ+LPV+K R ILYLVE + T +IVGETG GK+TQIPQYL EAGW GRV+ TQ
Sbjct: 40 EQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQ 99
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A VA R Y IRF+D T+ T IKFLTDG+L+REMM DPLL
Sbjct: 100 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 159
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
TKYS IM+DEAHER++ TDI +GLLKKIQR R DLRL+++SAT++A+ FF+ +
Sbjct: 160 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNE--- 216
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
R IL+VEGR F V I Y++ PV DY+++ V TV+ IH E GDIL F
Sbjct: 217 ----TSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAF 272
Query: 283 LTGQDDIDATIQLLTEEARTSKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
LTGQ++++ + +L E+AR + L +LP+Y+GL EQ +VF R RKV++
Sbjct: 273 LTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIV 332
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXX 400
+TN+AETS+T+ GIVYV+D GF K R YNP + IE LVVAP+S+AS
Sbjct: 333 ATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSG 392
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KCYRLYTEE F K +P +PEMQRSNL ++QLKALGIDN+L F + + PP ++M++A
Sbjct: 393 KCYRLYTEEAFDK-LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 451
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
LE+LY+LG LD D +LT P G +VAE PL PM +KM+L S GCS+EI++I+A++ IQ+
Sbjct: 452 LELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN 511
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
I+V + + +FA EGDH+T LN+Y+ F++ K+S WC ++F+NY ++R
Sbjct: 512 IFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIR 569
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
Identities = 264/537 (49%), Positives = 364/537 (67%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
K LP+ +++ ++LY+VE++ T++VG+TGSGKTTQIPQ+L++AGW G++I TQP
Sbjct: 16 KPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQP 75
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A VA R Y+IRFED T+ + T IKFLTDG+L+RE + DPLL+
Sbjct: 76 RRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTS-EATRIKFLTDGLLIREALVDPLLS 134
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
+YS++MVDEAHERS+STDILLGLLKKI++ R +LR+IISSAT++A+ AFF + G
Sbjct: 135 RYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSR 194
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
+ E + I+S+EGR + + I Y+E P DY+Q AVSTVL +H+ EP GDILVFL
Sbjct: 195 QDREEPQGTIG-TIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDILVFL 253
Query: 284 TGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTN 343
TG+D+I+A + ++E GL+ LPL+SGLS +Q +F P RKV+ STN
Sbjct: 254 TGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTN 313
Query: 344 IAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCY 403
IAE S+T+ GIVYVVDSGF K R YNP + IE L PISKA+ KC+
Sbjct: 314 IAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCF 373
Query: 404 RLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEV 463
RLYTEE + + IPE+QRSNL ++QLKALGIDN+L FD+ PP E M +ALE+
Sbjct: 374 RLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTKALEL 432
Query: 464 LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS-IW 522
LYSLG LDD AKLT P G ++AE+ ++PM++K +LS+ GC E++TI+A+ S +W
Sbjct: 433 LYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGGDVW 492
Query: 523 VSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL-QSCKSSHWCHKNFINYHAMVR 578
+ G +K+ + + +FAA EGDH+TFLN+Y+ F+ + K S +CH+N +NY M R
Sbjct: 493 IQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSR 549
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 263/537 (48%), Positives = 370/537 (68%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
K LP+ +++ +ILYLVET+ TI+VG+TGSGKTTQ+PQYL +AGW G+ IA TQP
Sbjct: 17 KPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQP 76
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A VA+R Y+IRFED T+ +T IKFLTDG+LLRE + DPLL+
Sbjct: 77 RRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSA-MTRIKFLTDGMLLREALVDPLLS 135
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
+YSVIMVDEAHERS+STDILLG+LKKI + R +LR+I+SSAT++A+ +F + ++G
Sbjct: 136 RYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQG 195
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
G V I+S+EGR + V ++E +YV+ +V TV IH +E GDIL+FL
Sbjct: 196 PNGE--VGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFL 253
Query: 284 TGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTN 343
TG+++I+ IQL++E A T S L+ LPLY+GL+ +Q VF P P RKVV+STN
Sbjct: 254 TGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTN 313
Query: 344 IAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCY 403
IAE S+T+ GIVYVVD GF+K R Y+P + IE L PISKA+ KC+
Sbjct: 314 IAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCF 373
Query: 404 RLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEV 463
RLYT+ + +++P IPE+QRSNL ++QLKALGIDNI+ FD+ SPP + +IRA E+
Sbjct: 374 RLYTQHAY-EQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFEL 432
Query: 464 LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIW 522
LYSLG +DD AKLT P G ++AE+ ++PM++K++LS+ GC EI+TI+A++S+Q ++W
Sbjct: 433 LYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVW 492
Query: 523 VSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL-QSCKSSHWCHKNFINYHAMVR 578
V G +K + ++ +FA EGDH+T+LN+Y+ F+ + K S WC N +NY +++R
Sbjct: 493 VQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLR 549
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1206 (429.6 bits), Expect = 2.7e-128, Sum P(2) = 2.7e-128
Identities = 248/526 (47%), Positives = 337/526 (64%)
Query: 61 LVETHATTIIVGETGSGKTTQ----IP--QYLKEAGWADGGRVIACTQPRRLAVQAVASR 114
L E TT++ + Q +P +YL EAGW GRV+ TQPRR+A VA R
Sbjct: 29 LAENSGTTVVYNPYAALSIEQQRQKLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGR 88
Query: 115 XXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAH 174
Y IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAH
Sbjct: 89 VAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAH 148
Query: 175 ERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLE 234
ER++ TDI +GLLKKIQ+ R DLRLI++SAT++A FF+ + R
Sbjct: 149 ERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE-------TSDPARDT 201
Query: 235 PAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQ 294
IL+VEGR F V I Y++ PV DY+++ V TV+ IH E GD+L FLTGQ++++ +
Sbjct: 202 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVS 261
Query: 295 LLTEEARTSKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLE 352
+L E+AR + L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+
Sbjct: 262 MLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 321
Query: 353 GIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFV 412
GIVYV+D GF K R YNP + IE LVV P+S+AS KCYRLYTEE F
Sbjct: 322 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD 381
Query: 413 KEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDD 472
K +P +PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD
Sbjct: 382 K-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDK 440
Query: 473 DAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKEL 532
D +LT P G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V +
Sbjct: 441 DCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHA 500
Query: 533 DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+FA EGDH+T LNIY+ F++ K S WC ++F+NY +VR
Sbjct: 501 IRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVR 546
Score = 74 (31.1 bits), Expect = 2.7e-128, Sum P(2) = 2.7e-128
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKY 54
+FW+PG E P + EE + E+QRQ+LPV+KY
Sbjct: 9 KFWRPGTEGPGVSISEERQSL-AENSGTTVVYNPYAALSIEQQRQKLPVFKY 59
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 826 (295.8 bits), Expect = 1.7e-125, Sum P(2) = 1.7e-125
Identities = 159/339 (46%), Positives = 233/339 (68%)
Query: 240 VEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEE 299
+ GR F V I Y ++P +DY+ A++ TV+ IH EPPGDIL+FLTGQ++IDA Q+L E
Sbjct: 680 IPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYER 739
Query: 300 ARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVD 359
++ N LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++GI YV+D
Sbjct: 740 MKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVID 799
Query: 360 SGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEG 419
GFSKQ+ +NP + +++LVVAPIS+A+ KCYRLYTE F E+ A
Sbjct: 800 PGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASS 859
Query: 420 IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSP 479
IPE+QR+NL + V+ +KA+GI+++L FD+ PP + ++ A+E LYSLG LD++ LT
Sbjct: 860 IPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR- 918
Query: 480 TGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRF 539
G ++AE PL+P +SKM+++S +LGCS+EI+T+ A+LS+Q+++ + Q D+ K +F
Sbjct: 919 LGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKF 978
Query: 540 AAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
EGDH+T LN+Y+ + S S+ WC +NF+ ++ R
Sbjct: 979 FQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRR 1017
Score = 429 (156.1 bits), Expect = 1.7e-125, Sum P(2) = 1.7e-125
Identities = 86/173 (49%), Positives = 120/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LP++ R A L V H +++GETGSGKTTQ+ QYL EAG+ G+ I CTQ
Sbjct: 502 KEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGK-IGCTQ 560
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +V+ R Y IRFED T+ + T IKF+TDG+LLRE + DP L
Sbjct: 561 PRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE-TIIKFMTDGILLRECLLDPNL 619
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ YSVI++DEAHER+ISTD+L GLLK+ + R +L+++I+SAT+EA+ S +F
Sbjct: 620 SAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYF 672
Score = 38 (18.4 bits), Expect = 3.1e-84, Sum P(2) = 3.1e-84
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 63 ETHATTIIVGETGSGKTTQIPQYLK 87
E H I G G T+IP++ K
Sbjct: 460 ERHLAQEIRSIAGQGIDTEIPEWKK 484
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 251/537 (46%), Positives = 352/537 (65%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR RLP++K R ILY+ E + T IIVGETG GK+TQ+PQ+L EAGWA GR I TQ
Sbjct: 71 QQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQ 130
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+AV +A+R YT+RF+D ++KD T +KF+TDG+LLRE++ DPLL
Sbjct: 131 PRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD-TKVKFMTDGLLLREILADPLL 189
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+KYS+IM+DEAHERS +TDILLGLL+KI + R+DLR+I+SSAT++A+ FF +
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNE--T 247
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
G + I+SVEGR V +H+ + V DY Q+AV TV+ IH E PGDILVF
Sbjct: 248 GNSDKDTA-----GIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVF 302
Query: 283 LTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIST 342
LTGQD+++ + L E A + KN L ++P Y L EQ + F TP G RKVV++T
Sbjct: 303 LTGQDEVEDVCEKLRELAG-NLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVAT 361
Query: 343 NIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKC 402
NIAE S+T+ GI YV+D+G+ K R + + +E L+ +SKAS KC
Sbjct: 362 NIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKC 421
Query: 403 YRLYTEEYFVKEIPAEG-IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRAL 461
YRLY E F E AEG +PE+QR + S ++QLKALG+ N+ F + + PP AMI L
Sbjct: 422 YRLYPESEF--ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGL 479
Query: 462 EVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSI 521
E+LY+LG +D+ ++LTSP G Q+AE PL PM SK +L S E GCS E++TI A++ IQ +
Sbjct: 480 ELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDV 539
Query: 522 WVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+++ + + D + +FA EGDH+T LN++ F+++ +S WC +F+NY ++R
Sbjct: 540 FITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMR 596
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 806 (288.8 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 731 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 791 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 850
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 851 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 910
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 911 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 971 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1029
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1030 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1074
Score = 443 (161.0 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 560 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 618
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 619 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 677
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 678 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 737
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 738 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 773
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 806 (288.8 bits), Expect = 6.1e-124, Sum P(2) = 6.1e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 700 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 759
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 760 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 819
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 820 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 879
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 880 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 939
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 940 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 998
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 999 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1043
Score = 443 (161.0 bits), Expect = 6.1e-124, Sum P(2) = 6.1e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 529 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 587
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 588 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 646
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 647 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 706
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 707 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 742
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 806 (288.8 bits), Expect = 6.3e-124, Sum P(2) = 6.3e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 723 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 782
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 783 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 842
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 843 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 902
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 903 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 962
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 963 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1021
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1022 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1066
Score = 443 (161.0 bits), Expect = 6.3e-124, Sum P(2) = 6.3e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 552 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 610
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 611 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 669
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 670 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 729
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 730 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 765
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 806 (288.8 bits), Expect = 6.7e-124, Sum P(2) = 6.7e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 727 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 786
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 787 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 846
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 847 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 906
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 907 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 966
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 967 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1025
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1026 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1070
Score = 443 (161.0 bits), Expect = 6.7e-124, Sum P(2) = 6.7e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 556 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 614
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 615 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 673
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 674 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 733
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 734 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 769
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 806 (288.8 bits), Expect = 7.2e-124, Sum P(2) = 7.2e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 731 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 791 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 850
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 851 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 910
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 911 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 971 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1029
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1030 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1074
Score = 443 (161.0 bits), Expect = 7.2e-124, Sum P(2) = 7.2e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 560 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 618
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 619 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 677
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 678 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 737
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 738 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 773
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 806 (288.8 bits), Expect = 8.3e-124, Sum P(2) = 8.3e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 741 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 800
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 801 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 860
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 861 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 920
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 921 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 980
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 981 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1039
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1040 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1084
Score = 443 (161.0 bits), Expect = 8.3e-124, Sum P(2) = 8.3e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 570 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 628
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 629 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 687
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 688 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 747
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 748 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 783
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 806 (288.8 bits), Expect = 9.9e-124, Sum P(2) = 9.9e-124
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 753 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 812
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 813 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 872
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 873 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 932
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 933 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 992
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 993 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1051
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1052 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1096
Score = 443 (161.0 bits), Expect = 9.9e-124, Sum P(2) = 9.9e-124
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 582 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 640
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 641 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 699
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 700 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 759
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 760 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 795
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 806 (288.8 bits), Expect = 1.0e-123, Sum P(2) = 1.0e-123
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 755 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 814
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 815 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 874
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 875 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 934
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 935 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 994
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 995 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1053
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1054 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1098
Score = 443 (161.0 bits), Expect = 1.0e-123, Sum P(2) = 1.0e-123
Identities = 99/218 (45%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 584 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 642
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 643 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 701
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 702 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 761
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 762 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 797
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 806 (288.8 bits), Expect = 1.1e-123, Sum P(2) = 1.1e-123
Identities = 160/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 679 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 738
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 739 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 798
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 799 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 858
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 859 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 918
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 919 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 977
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 978 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1022
Score = 437 (158.9 bits), Expect = 1.1e-123, Sum P(2) = 1.1e-123
Identities = 97/218 (44%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+++ + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 508 EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQP 566
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP LT
Sbjct: 567 RRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLT 625
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 626 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 685
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 686 PGRT--YPVEILYTKEPETDYLDASLITVMQIHLTEPP 721
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 799 (286.3 bits), Expect = 1.4e-123, Sum P(2) = 1.4e-123
Identities = 161/342 (47%), Positives = 224/342 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I ++ GR F V+I Y ++P +DY+ AA+ TVL IH EP GDILVFLTGQ++ID+ Q L
Sbjct: 684 IFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSL 743
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E + KN LIILP+YS L Q ++F P P GKRKVV++TNIAE SLT++GI Y
Sbjct: 744 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYY 803
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GF+KQ YNP +E+LV+ PIS+AS KCYRLYTE + E+P
Sbjct: 804 VVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMP 863
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IPE+QR NL + +KA+GI+++L FD+ P P+A+I A+E LYSLG LD++ L
Sbjct: 864 PTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLL 923
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T G ++AE PLEP +SKM+L+S +LGCS+EI+T+ A++ +I+ R Q + D+ +
Sbjct: 924 TK-LGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKR 982
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+F EGDH+T L +Y+ + S WC +NFI ++ R
Sbjct: 983 AKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRR 1024
Score = 444 (161.4 bits), Expect = 1.4e-123, Sum P(2) = 1.4e-123
Identities = 87/173 (50%), Positives = 121/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LP+YK + ++ V + +++GETGSGKTTQ+ QYL EAG+ G+ I CTQ
Sbjct: 509 QEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGCTQ 567
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y IRFED T D T IK++TDG+LLRE++ D L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILIDENL 626
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
++YSVIM+DEAHER+I TD+L GLLKK+ + R DLRLI++SAT++A+ S +F
Sbjct: 627 SQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 679
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 804 (288.1 bits), Expect = 5.7e-123, Sum P(2) = 5.7e-123
Identities = 159/345 (46%), Positives = 228/345 (66%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR + V++ Y +EP +DY+ A++ TV+ IH EPPGDILVFLTGQ++ID
Sbjct: 721 EAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 780
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++G
Sbjct: 781 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 840
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ+ YN + I+ LVV PIS+A KCYRLYTE +
Sbjct: 841 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 900
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A+E LY+LG LDD+
Sbjct: 901 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 960
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+++ + Q D
Sbjct: 961 GLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1019
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1020 QKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1064
Score = 436 (158.5 bits), Expect = 5.7e-123, Sum P(2) = 5.7e-123
Identities = 98/218 (44%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I CTQP
Sbjct: 550 EQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGK-IGCTQP 608
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + DP L
Sbjct: 609 RRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDPDLG 667
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
+Y++IM+DEAHER+I TD+L GLLKK + R+D++LI++SAT++A S +F+
Sbjct: 668 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTI 727
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 728 PGRT--YPVEVLYTKEPETDYLDASLITVMQIHLTEPP 763
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 820 (293.7 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 164/346 (47%), Positives = 229/346 (66%)
Query: 233 LEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDAT 292
LE I ++ GR F V+I Y EP SDY++AA TV+ IH EPPGD+LVFLTGQ++ID +
Sbjct: 705 LEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTS 764
Query: 293 IQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLE 352
++L E ++ + LIILP+Y L Q ++F P P GKRKVVI+TNIAETSLT++
Sbjct: 765 CEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTID 824
Query: 353 GIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFV 412
GI YVVD GF KQ+ YNP S +++LVV PIS+A+ KCYRLYTE F
Sbjct: 825 GIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFR 884
Query: 413 KEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDD 472
E+ +PE+QR+NL S ++QLKA+GI+N++ FD+ +PP ++MI AL L++L LD
Sbjct: 885 DEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDG 944
Query: 473 DAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKEL 532
D LT G ++AE PLEP +SK+++ S +LGCSEE++TI A+L++Q+I+ + Q
Sbjct: 945 DGLLTK-LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHA 1003
Query: 533 DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
D+ K +F EGDH+T L +Y + S WC +NFI +M R
Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Score = 404 (147.3 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 96/218 (44%), Positives = 132/218 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP++ + ++ + + ++VGETGSGKTTQ+ QY EAG G+ I CTQP
Sbjct: 535 EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCTQP 593
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T++D T IK++TDG+LLRE + DP L+
Sbjct: 594 RRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TIIKYMTDGMLLRECLIDPDLS 652
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF-----HAR 218
YS+IM+DEAHER+I TD+L GLLK R R +L+LII+SAT+++ S +F
Sbjct: 653 GYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTI 712
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP +E V QIH E P
Sbjct: 713 PGRTF--PVEILYTREPESDYLEAAHITVMQIHLTEPP 748
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 820 (293.7 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 164/346 (47%), Positives = 229/346 (66%)
Query: 233 LEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDAT 292
LE I ++ GR F V+I Y EP SDY++AA TV+ IH EPPGD+LVFLTGQ++ID +
Sbjct: 705 LEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTS 764
Query: 293 IQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLE 352
++L E ++ + LIILP+Y L Q ++F P P GKRKVVI+TNIAETSLT++
Sbjct: 765 CEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTID 824
Query: 353 GIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFV 412
GI YVVD GF KQ+ YNP S +++LVV PIS+A+ KCYRLYTE F
Sbjct: 825 GIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFR 884
Query: 413 KEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDD 472
E+ +PE+QR+NL S ++QLKA+GI+N++ FD+ +PP ++MI AL L++L LD
Sbjct: 885 DEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDG 944
Query: 473 DAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKEL 532
D LT G ++AE PLEP +SK+++ S +LGCSEE++TI A+L++Q+I+ + Q
Sbjct: 945 DGLLTK-LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHA 1003
Query: 533 DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
D+ K +F EGDH+T L +Y + S WC +NFI +M R
Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Score = 404 (147.3 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
Identities = 96/218 (44%), Positives = 132/218 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP++ + ++ + + ++VGETGSGKTTQ+ QY EAG G+ I CTQP
Sbjct: 535 EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCTQP 593
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T++D T IK++TDG+LLRE + DP L+
Sbjct: 594 RRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TIIKYMTDGMLLRECLIDPDLS 652
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF-----HAR 218
YS+IM+DEAHER+I TD+L GLLK R R +L+LII+SAT+++ S +F
Sbjct: 653 GYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTI 712
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP +E V QIH E P
Sbjct: 713 PGRTF--PVEILYTREPESDYLEAAHITVMQIHLTEPP 748
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 765 (274.4 bits), Expect = 3.0e-121, Sum P(2) = 3.0e-121
Identities = 149/335 (44%), Positives = 223/335 (66%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I S+ GR F V+I Y +EP SDY+ AA+ TV+ IH EPPGD+L+FLTGQ++ID ++L
Sbjct: 746 IFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEIL 805
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E + + L+ILP+YS L Q ++F P P G RKVVI+TNIAETS+T++ I Y
Sbjct: 806 YERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYY 865
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ Y+P +++LVV PIS+A KC+RLYTE + E+
Sbjct: 866 VIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEML 925
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IP++QR NL ++ LKA+GI+++L FD+ PP M+ ALE LY+L LDD+ L
Sbjct: 926 PTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLL 985
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T G ++A+ P+EP ++K++++S ++GCSEE+++I A+LSIQS++ + Q++ D+ K
Sbjct: 986 TR-LGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKK 1044
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
+F GDH+T LN+Y + +S S+ WC++NFI
Sbjct: 1045 AKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFI 1079
Score = 463 (168.0 bits), Expect = 3.0e-121, Sum P(2) = 3.0e-121
Identities = 105/219 (47%), Positives = 141/219 (64%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LPVYK+R +L V + I+VG+TGSGKTTQ+ QYL EAGWA+ G +I CTQ
Sbjct: 571 KQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKG-IIGCTQ 629
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R YTIRFED T+ + T IK++TDG+L RE++ DP L
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPE-TKIKYMTDGMLQREVLLDPDL 688
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH-----A 217
KYSVIM+DEAHER+I+TD+L GLLK + R DLRLI++SAT++A S +F+ +
Sbjct: 689 KKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFS 748
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
GR VE++ EP ++ V QIH E P
Sbjct: 749 IPGRTF--PVEIMYSKEPESDYLDAALITVMQIHLTEPP 785
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 751 (269.4 bits), Expect = 3.2e-121, Sum P(2) = 3.2e-121
Identities = 150/344 (43%), Positives = 223/344 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I S GR + V+I+Y P +DY+ AA+ T+L IH +EP GDILVF TGQ++I+ ++L
Sbjct: 573 IFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEIL 632
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
R LII P+Y+ L Q ++F PTP G RKVV++TNIAETSLT++GI Y
Sbjct: 633 KHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 692
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GFSK + YNP + +E+L++ PISKAS KCYRLYT + ++
Sbjct: 693 VVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLE 752
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL S V+ LK+LGI +++ FD+ PP EA++++LE+L++LG L+ +L
Sbjct: 753 ENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGEL 812
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T G ++AE PL+PM+SKMI+ S++ CS+EII+I+A+LSI SI+ + Q D A
Sbjct: 813 TK-AGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNA 871
Query: 536 KLRFAAAE-GDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ L +Y + ++ S+ WC++N+I +M R
Sbjct: 872 RMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 915
Score = 462 (167.7 bits), Expect = 3.2e-121, Sum P(2) = 3.2e-121
Identities = 92/173 (53%), Positives = 124/173 (71%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LP+Y YR +L VE H +IVG+TGSGKTTQIPQYL EAG+ G+V CTQ
Sbjct: 398 QEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKV-GCTQ 456
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T+ D T +K++TDG+LLRE++ +P L
Sbjct: 457 PRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRELLGEPDL 515
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSV++VDEAHER++STDIL GL+K I R R DL+L+ISSAT++A+ S +F
Sbjct: 516 ASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 568
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 753 (270.1 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 156/344 (45%), Positives = 221/344 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I GR + V I + P +DY+ AA++TVL IH KEP GD+LVFL GQ++I+A + L
Sbjct: 573 IFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENL 632
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R LII P+Y+ L Q ++F PTP G RKVV++TNIAETSLT++GI Y
Sbjct: 633 KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 692
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GFSK + YNP + +E+L+V PISKAS KCYRLYT + ++
Sbjct: 693 VVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLE 752
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL S V+ LK+LGI N+L FD+ PP EA+I++LE+L++LG L+ +L
Sbjct: 753 DNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGEL 812
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-QSIWVSGRGAQKELDEA 535
T G ++AE PL+PM+SKMI+ S++ CS+EII+I+A+LSI SI+ + Q D A
Sbjct: 813 TK-AGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNA 871
Query: 536 KLRFAAAE-GDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
F GDH+ FL IY + ++ S+ WC++N+I +M R
Sbjct: 872 MKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKR 915
Score = 456 (165.6 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 93/173 (53%), Positives = 123/173 (71%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LP+Y YR +L V+ H IIVGETGSGKTTQIPQYL EAG+ G+V CTQ
Sbjct: 398 QEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKV-GCTQ 456
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T++ T +K++TDG+LLRE++ +P L
Sbjct: 457 PRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEK-TILKYMTDGMLLRELLGEPDL 515
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSVI+VDEAHER++ TDIL GL+K I R R DL+L+ISSAT++A+ S FF
Sbjct: 516 GSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF 568
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 782 (280.3 bits), Expect = 1.6e-120, Sum P(2) = 1.6e-120
Identities = 153/342 (44%), Positives = 226/342 (66%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I ++ GR + V+I Y ++P +DY+ AA+ TV+ IH E PGDILVFLTGQ++ID + ++L
Sbjct: 680 IFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEIL 739
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E ++ + L+ILP+YS L Q ++F P P G RKVVI+TNIAETSLT++GI Y
Sbjct: 740 YERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYY 799
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GF KQ ++P +++L+V PIS+A KCYRLYTE + E+
Sbjct: 800 VVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEML 859
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IPE+QR NL ++ LKA+GI+++L FD+ PP + MI AL+ LY+L LDD+ L
Sbjct: 860 PSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLL 919
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T P G ++A+ P+EP +SK++++S ELGCSEE+++I A+LS+ +IW R Q+E D +
Sbjct: 920 T-PLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQR 978
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+FA E DH+T LN+Y + + S +WC++++I M R
Sbjct: 979 AQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRR 1020
Score = 434 (157.8 bits), Expect = 1.6e-120, Sum P(2) = 1.6e-120
Identities = 86/174 (49%), Positives = 122/174 (70%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LPV+K R L V + +++GETGSGKTTQI QYL E G+ ++I CTQ
Sbjct: 504 KEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQ 563
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R YTIRFED T++ +T IK++TDG+L RE + DPLL
Sbjct: 564 PRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR-MTQIKYMTDGMLQRECLVDPLL 622
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
+KYSVI++DEAHER+++TD+L GLLK R DL+LI++SAT++A+ S++F+
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFY 676
Score = 39 (18.8 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 300 ARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
A K L +LPLY+ + ++ ++ S +G R
Sbjct: 1133 ANQVSKTKKNLKVLPLYNRFEKPDEWRI-SKQRKGGR 1168
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 769 (275.8 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 150/343 (43%), Positives = 227/343 (66%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I+Y + P +DY++A V +VL IH + PGD+LVFLTGQ++I+A +LL
Sbjct: 582 VFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELL 641
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E R S L++LP+Y+ L Q ++F+PTP G RKVV++TNIAETSLT++GI+Y
Sbjct: 642 QERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIY 701
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YN + +E+L+V P S+AS KC+RLYT F E+
Sbjct: 702 VIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEME 761
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LGI++++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 762 ETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGEL 821
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T G ++AE+P++PM+SKMIL+S + CSEE++TI+A+LS+ SI+ + D A
Sbjct: 822 TK-LGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNA 880
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y +++S S+ WC +NFI + +M R
Sbjct: 881 RMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKR 923
Score = 436 (158.5 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 84/173 (48%), Positives = 119/173 (68%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LP++ YR +L + H +I GETGSGKTTQIPQYL E G+ GG I CTQ
Sbjct: 406 QEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQ 465
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T+ + T +K++TDG+LLRE + +P L
Sbjct: 466 PRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTS-ERTILKYMTDGMLLREFLTEPDL 524
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSVI++DEAHER++ TDIL GL+K I R R DL+++++SAT++ + S+FF
Sbjct: 525 ASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFF 577
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 764 (274.0 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 572 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 631
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 632 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 691
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 692 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 751
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 752 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 811
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 812 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 870
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 871 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 913
Score = 430 (156.4 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 84/170 (49%), Positives = 116/170 (68%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ G IACTQPRR
Sbjct: 399 RRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 458
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 459 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 517
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ SAFF
Sbjct: 518 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFF 567
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 765 (274.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 151/343 (44%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 573 IFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 632
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 633 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 692
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 693 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 752
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 753 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 812
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 813 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 871
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 872 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 426 (155.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 83/170 (48%), Positives = 115/170 (67%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ G IACTQPRR
Sbjct: 400 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 459
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 518
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 519 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFF 568
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 764 (274.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 569 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 628
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 629 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 688
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 689 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 748
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 749 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 808
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 809 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 867
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 868 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 910
Score = 427 (155.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 83/170 (48%), Positives = 116/170 (68%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ + G IACTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 514
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 515 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFF 564
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 764 (274.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 573 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 632
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 633 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 692
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 693 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 752
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 753 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 812
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 813 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 871
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 872 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 427 (155.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 84/170 (49%), Positives = 115/170 (67%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L V H II GETGSGKTTQIPQYL E G+ G IACTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 518
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 519 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFF 568
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 764 (274.0 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 573 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 632
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 633 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 692
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 693 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 752
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 753 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 812
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 813 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 871
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 872 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 427 (155.4 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
Identities = 84/170 (49%), Positives = 115/170 (67%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L V H II GETGSGKTTQIPQYL E G+ G IACTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 518
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 519 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFF 568
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 764 (274.0 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 570 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 629
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 630 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 689
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 690 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 749
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 750 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 809
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 810 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 868
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 869 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 911
Score = 425 (154.7 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 83/170 (48%), Positives = 115/170 (67%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ G IACTQPRR
Sbjct: 397 RRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRR 456
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 457 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 515
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 516 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFF 565
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 760 (272.6 bits), Expect = 2.6e-118, Sum P(2) = 2.6e-118
Identities = 151/345 (43%), Positives = 224/345 (64%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E I ++ GR F V+I Y ++P SDY+ AA++TV+ IH EPPGDIL+FLTGQ++ID +
Sbjct: 708 ECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSC 767
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
++L E + + LIILP+YS L Q ++F P P G RKVVI+TNIAETS+T++
Sbjct: 768 EILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDH 827
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
I YVVD GF KQ Y+P +++LVV PIS+A KC+RLYTE +
Sbjct: 828 IYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQT 887
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ IPE+QR NL + ++ LKA+GI+++L FD+ PP M+ ALE LY+L LDD+
Sbjct: 888 EMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDE 947
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELD 533
LT G ++A+ P+EP +SK++++S E+ CS+E+++I A+L++ +++ + Q + D
Sbjct: 948 GLLTR-LGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQAD 1006
Query: 534 EAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
K +F GDH+T LN+Y + QS S WC +NFI + A+ R
Sbjct: 1007 AKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTR 1051
Score = 439 (159.6 bits), Expect = 2.6e-118, Sum P(2) = 2.6e-118
Identities = 90/174 (51%), Positives = 124/174 (71%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LPV+ +R ++ V+ + I+VGETGSGKTTQ+ QYL EAG+A+ G VI CTQ
Sbjct: 536 KQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEG-VIGCTQ 594
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R YTIRFED T+ T IK++TDG+L RE++ DP L
Sbjct: 595 PRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSP-ATRIKYMTDGMLQREIVIDPDL 653
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
+YSVIM+DEAHER+I+TD+L LLKK R R DL++I++SAT++A SA+F+
Sbjct: 654 KRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFN 707
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 248/546 (45%), Positives = 351/546 (64%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG---GR--V 97
EK+R LPV+ + L + ++ T I+VGETGSGKTTQIPQ++ +A AD GR +
Sbjct: 60 EKRRD-LPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWL 118
Query: 98 IACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM 157
+ CTQPRR+A +V+ R Y+IRFED T+ T +K+LTDG+LLRE M
Sbjct: 119 VGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSR-TMLKYLTDGMLLREAM 177
Query: 158 DDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHA 217
DPLL +Y VI++DEAHER+++TD+L GLLK++ R R DL+L++ SAT+EA+ +F
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYF-- 235
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG 277
G L + V GR V+I Y +EP DY++AA+ TV+ IH EPPG
Sbjct: 236 -------SGAPL--------MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPG 280
Query: 278 DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP----R 333
DILVFLTG+++I+ + + +E + ++PLYS L A Q+++F P P
Sbjct: 281 DILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTE 340
Query: 334 GK---RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXX 390
G RK+V+STNIAETSLT++GIVYV+D GF+KQ+ YNP +E+L+V+PISKAS
Sbjct: 341 GGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQR 400
Query: 391 XXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
KC+RLYTE+ F ++ + PE+ RSNL + V+ LK LGID+++ FD+
Sbjct: 401 SGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 460
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P PE ++RALEVL LG LDD+ LT TG ++E PL+P +SKM++ S E CS EI+
Sbjct: 461 PPAPETLMRALEVLNYLGALDDEGNLTK-TGEIMSEFPLDPQMSKMLIVSPEFNCSNEIL 519
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNF 570
++SA+LS+ + +V R AQK DEAK RF +GDH+T LN+Y + Q+ + +WC +NF
Sbjct: 520 SVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENF 579
Query: 571 INYHAM 576
+N AM
Sbjct: 580 VNNRAM 585
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 732 (262.7 bits), Expect = 5.4e-117, Sum P(2) = 5.4e-117
Identities = 142/346 (41%), Positives = 224/346 (64%)
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E + V GR + V I+Y +P ++Y+QAA++T+L IH +P GDILVFLTGQD+I+
Sbjct: 585 EAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMS 644
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
+ + E R K +I+ P+Y+ L Q ++F PTP G RKVV++TNIAETS+T++G
Sbjct: 645 ENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDG 704
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVK 413
+ +V+DSGF KQ YNP + +E+LV P S+AS KC+RLYT +
Sbjct: 705 VNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNN 764
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ PE+QR+NL + V+ LK+LGI+N+L FD+ +PPPE ++R+LE+LY+LG L++
Sbjct: 765 ELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNR 824
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLS-IQSIWVSGRGAQKEL 532
+LT G Q+AE P +PM+SK +++S++ GC EE+++I ++L S++ + E
Sbjct: 825 GELTK-LGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEA 883
Query: 533 DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
D+A+ F GDH+T L+I+ ++ + S +W +NF+ Y ++ R
Sbjct: 884 DKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCR 929
Score = 446 (162.1 bits), Expect = 5.4e-117, Sum P(2) = 5.4e-117
Identities = 88/173 (50%), Positives = 121/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E R+ LPVY+Y+ +L + + +IV ETGSGKTTQ+PQ+L EAG+ G + I CTQ
Sbjct: 412 ESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQ 471
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFE+ T++ T IK+LTDG+LLRE + +P L
Sbjct: 472 PRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEK-TVIKYLTDGMLLREFLTEPDL 530
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSVI++DEAHER++ TDIL GL+K I R R DL+++ISSATI+A+ SA+F
Sbjct: 531 ASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYF 583
Score = 40 (19.1 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 145 KFLTDGVLLREMMDDP 160
KF ++ + LR++ DDP
Sbjct: 210 KFSSEELALRKLADDP 225
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 728 (261.3 bits), Expect = 8.3e-117, Sum P(2) = 8.3e-117
Identities = 149/344 (43%), Positives = 221/344 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I ++ GR +NV IHY ++P ++Y+ AA++TV IH + PGDILVFLTGQ++I+A Q L
Sbjct: 651 IFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSL 710
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E AR +II P+Y+ L Q ++F PTP RKVV++TNIAETSLT++GIVY
Sbjct: 711 QETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVY 770
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF K+ +NP + +E+LVV P S+AS KC+RLYT+ + E+
Sbjct: 771 VIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELE 830
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
PE+QR+NL S ++ LK+LGID +L FD+ PP E +IRALE LY+LG L+D +L
Sbjct: 831 ESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGEL 890
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS-IWVSGRGAQKELDEA 535
T G Q+AE P +PM++K IL++++ GC EE+++I ++L S ++ + + D A
Sbjct: 891 TK-IGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSA 949
Query: 536 KLRFAAAEG-DHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ RF +G DH+T LNI+ ++ S S W +NF+ ++ R
Sbjct: 950 RNRFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTR 993
Score = 455 (165.2 bits), Expect = 8.3e-117, Sum P(2) = 8.3e-117
Identities = 87/173 (50%), Positives = 121/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E R++LP+Y++R I+ V H IIVGETGSGKTTQ+PQYL EAG+ G + CTQ
Sbjct: 475 EDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQ 534
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T+ D T +K++TDG+LLRE++ +P L
Sbjct: 535 PRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTS-DKTVLKYMTDGMLLRELLTEPDL 593
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+YS +M+DEAHER++ TDI GLLK I + R DL+L+ISSAT++A+ ++F
Sbjct: 594 GQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYF 646
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 776 (278.2 bits), Expect = 9.2e-117, Sum P(2) = 9.2e-117
Identities = 153/343 (44%), Positives = 229/343 (66%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I ++ GR F V++ Y +EP +DY+ A++ TV+ IH +EPPGDIL+FLTGQ++ID ++L
Sbjct: 755 IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEIL 814
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E ++ + LIILP+YS L Q ++F P P G RKVVI+TNIAETSLT++GI Y
Sbjct: 815 YERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFY 874
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GF KQ+ YN + +++LVV PIS+A+ K YRLYTE + E+
Sbjct: 875 VVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEML 934
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+QLK +GI+++L FD+ +PP E+++ ALE L+SL LDD+ L
Sbjct: 935 PTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLL 994
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T G ++AE PLEP +SKM++ S L CS+EI+TI ++LS+Q+++ + Q D+ K
Sbjct: 995 TR-LGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKK 1053
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVRN 579
+F AEGDH+T L +Y + + S+ WC++NF+ + R+
Sbjct: 1054 AKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRS 1096
Score = 409 (149.0 bits), Expect = 9.2e-117, Sum P(2) = 9.2e-117
Identities = 86/172 (50%), Positives = 115/172 (66%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP+YK R ++ V + I++GETGSGKTTQI QYL E G+ G+ I CTQP
Sbjct: 581 EQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCTQP 639
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T+ + T IK++TDG+LLRE + + L
Sbjct: 640 RRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPE-TIIKYMTDGMLLRECLMEAELK 698
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSVIM+DEAHER+I TD+L GLLK + R +L+LI++SAT++A S +F
Sbjct: 699 SYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYF 750
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 244/545 (44%), Positives = 350/545 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYL---KEAGWADGGR--VI 98
++R+ LPV+ + L + + T I+VGETGSGKTTQIPQ++ +A +D R ++
Sbjct: 56 EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLV 115
Query: 99 ACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
CTQPRR+A +V+ R Y+IRFED ++ T +K+LTDG+LLRE M
Sbjct: 116 GCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPR-TVLKYLTDGMLLREAMA 174
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHAR 218
DPLL +Y VI++DEAHER+++TD+L GLLK++ + R DL+L++ SAT+EA+ +F
Sbjct: 175 DPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYF--- 231
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
G L + V GR V+I Y +EP DY++AA+ TV+ IH EPPGD
Sbjct: 232 ------SGAPL--------MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGD 277
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR----- 333
ILVFLTG+++I+ + + +E + ++PLYS L A Q+++F P P
Sbjct: 278 ILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEG 337
Query: 334 GK--RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXX 391
G RK+V+STNIAETSLT++GIVYV+D GF+KQ+ YNP +E+L+V+PISKAS
Sbjct: 338 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 397
Query: 392 XXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 451
KC+RLYTE+ F ++ + PE+ RSNL + V+ LK LGID+++ FD+
Sbjct: 398 GRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 457
Query: 452 PPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P PE ++RALEVL LG LDDD LT TG ++E PL+P ++KM++ S E CS EI++
Sbjct: 458 PAPETLMRALEVLNYLGALDDDGNLTK-TGEIMSEFPLDPQMAKMLIVSPEFNCSNEILS 516
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
+SA+LS+ + ++ R AQK DEAK RF EGDH+T LN+Y F Q+ + +WC++NFI
Sbjct: 517 VSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFI 576
Query: 572 NYHAM 576
N AM
Sbjct: 577 NNRAM 581
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
Identities = 245/537 (45%), Positives = 344/537 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+RLP+ +YR ILY +E H I+VGETGSGK+TQ+PQYL E GW G +I T+P
Sbjct: 42 EQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGITEP 100
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR++ +A+R Y +RF + + T IKF+T+G+LLRE++ DPLLT
Sbjct: 101 RRVSTVTLANRVAQERGELVGDTVGYVVRFLE-SMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
+Y VI+VDEAHER++ TD++LGLLKKI R RS L+LIISSATI+A S FF + G G
Sbjct: 160 QYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFF-SWPGS-G 217
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
V+L S+EGR V Y+ EP +DYV+ V TV +H KEPPGDIL FL
Sbjct: 218 EVSVKL---------SIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFL 268
Query: 284 TGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTN 343
TGQ+++ + LL E +S++ + L +LP+Y +S +Q VF P+G RKVV++TN
Sbjct: 269 TGQEEVLEALDLLREYIASSEQEN--LKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATN 326
Query: 344 IAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCY 403
IAETS+T+ GIVYV+D G+ K ++YNP + ++LV+ P+SKAS K Y
Sbjct: 327 IAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVY 386
Query: 404 RLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEV 463
RLYT+ + P + PEM+RS L ++QLKALGI NIL FD+P+ PP + ++ ALE
Sbjct: 387 RLYTKSDYEALAPRQP-PEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALES 445
Query: 464 LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWV 523
L++L +D+ LT P G+ +AE+P M+SKM+ S ++GCSEEIITI A+L +QSI+
Sbjct: 446 LFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFS 505
Query: 524 --SGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ AQ+ A +F AEGD +T LN Y GF++ + +C + F+ Y + R
Sbjct: 506 RPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKR 562
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 711 (255.3 bits), Expect = 2.1e-114, Sum P(2) = 2.1e-114
Identities = 146/344 (42%), Positives = 216/344 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I ++ GR + V I+Y P ++Y+ AA++TV IH +P GDIL+FLTGQD+I+A +
Sbjct: 543 IFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQI 602
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
TE AR L+I P+Y+ L Q ++F PTP RKVV++TNIAETSLT++GIVY
Sbjct: 603 TETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVY 662
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D G+ K+ YNP + + NLVV P S+AS KC+RLYT+ ++ E+
Sbjct: 663 VIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEME 722
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
PE+QR+NL V+QLK+LGI+ +L F++ PP EA+I AL L++L L+ +L
Sbjct: 723 ESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHKGEL 782
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS-IWVSGRGAQKELDEA 535
T G Q+AE P +PM++K +L++++ GC EE+++I A+LS S ++ + Q D A
Sbjct: 783 TK-LGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAA 841
Query: 536 KLRFAAAEG-DHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ RF EG DHVT LNI+ +L S S W +NF+ ++ R
Sbjct: 842 RGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTR 885
Score = 441 (160.3 bits), Expect = 2.1e-114, Sum P(2) = 2.1e-114
Identities = 86/173 (49%), Positives = 120/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LP+Y YR L +E + +IVGETGSGKTTQ+PQYL EAG+ G + CTQ
Sbjct: 367 QETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQ 426
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T+ D T +K++TDG+LLRE M +P L
Sbjct: 427 PRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTS-DKTILKYMTDGMLLREFMTEPDL 485
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ YS +M+DEAHER++ TDILL L+K + R R DL+L+ISSAT+ A+ +++F
Sbjct: 486 SSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYF 538
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 725 (260.3 bits), Expect = 5.7e-114, Sum P(2) = 5.7e-114
Identities = 145/341 (42%), Positives = 218/341 (63%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR + V HY + P +DY+ AAV TVL IH EP GDILVFLTGQ+++D ++L
Sbjct: 638 NIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQT 697
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
R LII +YS L Q ++F PTP RKVV++TNIAETSLT++GI+YV+
Sbjct: 698 RTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVI 757
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
D GF KQ+ +NP + +E+LV+ P+S+AS KC+RL+T F E+
Sbjct: 758 DPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEEN 817
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
IPE+QR+NL + V+ LK++GI++++ FD+ PP + +I ALE LY+LG L+D +LT
Sbjct: 818 TIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTK 877
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-QSIWVSGRGAQKELDEAKL 537
G ++AE P++P +SKMI++S + CSEEI+TI A+LS+ +I+ + D A+
Sbjct: 878 -LGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARK 936
Query: 538 RFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
F +GDH+T +N++ + +S + WC +NFI + +M R
Sbjct: 937 LFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKR 977
Score = 430 (156.4 bits), Expect = 5.7e-114, Sum P(2) = 5.7e-114
Identities = 88/173 (50%), Positives = 121/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LPVY YR ++ V + IIVGETGSGKTTQIPQYL EAG++ G+ I CTQ
Sbjct: 461 QEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK-IGCTQ 519
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T++ T ++++TDG+L+RE + P L
Sbjct: 520 PRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQK-TVLQYMTDGMLVREFLTAPDL 578
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSV+++DEAHER++ TDIL GLLK I R R DL+L+ISSAT++A+ S +F
Sbjct: 579 ASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYF 631
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 235/540 (43%), Positives = 345/540 (63%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
K+R LPV++Y+ + L+ H ++VGETGSGKTTQIPQ+ + + G + ++CTQP
Sbjct: 67 KKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCTQP 126
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y+IRFED + T +K++TDG+LLRE M DP+L
Sbjct: 127 RRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAK-TLLKYMTDGMLLREAMSDPMLD 185
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
+Y VI++DEAHER+++TDIL+G+LK++ R RSDL+L++ SAT++A +F
Sbjct: 186 QYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYF-------- 237
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDILVF 282
+ P ++ V GR V+I Y EP DY++AA+ TV+ IH +E GDIL+F
Sbjct: 238 ----DNAP-----LMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMF 288
Query: 283 LTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP----RGK--R 336
LTGQ++I+ + + E L +PLYS L Q+++F P P G R
Sbjct: 289 LTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGR 348
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V+PISKAS
Sbjct: 349 KVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGR 408
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
KC+RLYTE+ F E+ PE+ RSNL + V+QLK LGID+++ FD+ P PE
Sbjct: 409 TRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPET 468
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
++RALE+L L LDDD LT G ++E PL+P ++KM+++S + CS EI++I+A+L
Sbjct: 469 LMRALELLNYLAALDDDGNLTD-LGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAML 527
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
S+ +V A+K DEAK+RFA +GDH+T LN+Y F QS + +WC++NFIN+ ++
Sbjct: 528 SVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSL 587
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 707 (253.9 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 141/343 (41%), Positives = 216/343 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR + V I Y + P +DY+ A +VL IH +P GDILVFLTGQD+I+ ++L
Sbjct: 422 IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVL 481
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ + LI++P+Y+ L Q ++F PTP RKV+++TNIAETSLT++ I+Y
Sbjct: 482 HDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIY 541
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF+KQ +N + +E+L+V PISKAS KC+RLYT + E+
Sbjct: 542 VIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELE 601
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR NL + V+ LKALGI++++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 602 DNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGEL 661
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS-IWVSGRGAQKELDEA 535
T G ++AE P++PM+ KM+L+S + CSEE++TI+A+LS+ S I+ + D A
Sbjct: 662 TK-LGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTA 720
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+ F GDH++ L +Y + ++ S+ WC++NFI Y +M R
Sbjct: 721 RKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKR 763
Score = 436 (158.5 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 86/173 (49%), Positives = 120/173 (69%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LPVY ++ ++ V+ H II GETGSGKTTQ+PQYL EAG+ ++I CTQ
Sbjct: 246 DETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQ 305
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T+ D T +K++TDG L RE + +P L
Sbjct: 306 PRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTS-DRTILKYMTDGTLHREFLSEPDL 364
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSV+++DEAHER++ TDIL GL+K I R R +L+L+ISSAT++A+ SAFF
Sbjct: 365 ASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFF 417
Score = 43 (20.2 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCR 194
+++DD L SV+ E ER LL + K+ ++ R
Sbjct: 105 DILDDEYLFDESVLTKREKEEREYKKQ-LLNIAKEHEKAR 143
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 237/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R +ACT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 250
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF------ 304
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 305 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 592
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 593 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 652
Query: 575 AMV 577
+++
Sbjct: 653 SLM 655
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 235/543 (43%), Positives = 350/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ + + G R +ACT
Sbjct: 106 KKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACT 165
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 166 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 224
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 225 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYF------ 278
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 279 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVL 327
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + + I+PLYS L +Q+++F P P K
Sbjct: 328 LFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAI 387
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 388 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 447
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 448 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 507
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 508 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITA 566
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DE+K+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 567 MLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 626
Query: 575 AMV 577
+++
Sbjct: 627 SLM 629
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 238/547 (43%), Positives = 347/547 (63%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ----YLKEA--GWADG-GR 96
++R +LPV++Y+ + L+ + +VGETGSGKTTQIPQ ++K+ G G R
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
++ACTQPRR+A +VA+R Y+IRFED + + T +K+ TDG+LLRE
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCIS-ERTVLKYCTDGMLLREA 189
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+ PLL KY V+++DEAHER+++TDIL+GL+K+I R R+D++++I SAT++A +F
Sbjct: 190 MNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF- 248
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEP 275
E P +LSV GR F V+I + DY++AA+ TV+ IH +E
Sbjct: 249 -----------EDCP-----LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEV 292
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GDIL+FLTGQ++I+ + + E + ++ L +PLYS L A Q+++F P P +
Sbjct: 293 EGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNR 352
Query: 336 ------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
RK VISTNIAETSLT++G+V+V+D GFSKQ+ YNP +E+L+V PISKAS
Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQ 412
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
KC+RLYTE + E+ + PE+ RSNL S V+QLK LG ++++ FD+
Sbjct: 413 RAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM 472
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE ++RALE+L L ++DD +LT G +AE PL+P ++KM+++S EL CS EI
Sbjct: 473 DPPAPETLMRALELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITSTELNCSNEI 531
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I+A+LS+ WV + E DEAK RFA +GDH+T LN+Y F Q+ + WC+ N
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDN 591
Query: 570 FINYHAM 576
FINY M
Sbjct: 592 FINYRTM 598
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 238/547 (43%), Positives = 347/547 (63%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ----YLKEA--GWADG-GR 96
++R +LPV++Y+ + L+ + +VGETGSGKTTQIPQ ++K+ G G R
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
++ACTQPRR+A +VA+R Y+IRFED + + T +K+ TDG+LLRE
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCIS-ERTVLKYCTDGMLLREA 189
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+ PLL KY V+++DEAHER+++TDIL+GL+K+I R R+D++++I SAT++A +F
Sbjct: 190 MNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF- 248
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEP 275
E P +LSV GR F V+I + DY++AA+ TV+ IH +E
Sbjct: 249 -----------EDCP-----LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEV 292
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GDIL+FLTGQ++I+ + + E + ++ L +PLYS L A Q+++F P P +
Sbjct: 293 EGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNR 352
Query: 336 ------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
RK VISTNIAETSLT++G+V+V+D GFSKQ+ YNP +E+L+V PISKAS
Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQ 412
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
KC+RLYTE + E+ + PE+ RSNL S V+QLK LG ++++ FD+
Sbjct: 413 RAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM 472
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE ++RALE+L L ++DD +LT G +AE PL+P ++KM+++S EL CS EI
Sbjct: 473 DPPAPETLMRALELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITSTELNCSNEI 531
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I+A+LS+ WV + E DEAK RFA +GDH+T LN+Y F Q+ + WC+ N
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDN 591
Query: 570 FINYHAM 576
FINY M
Sbjct: 592 FINYRTM 598
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 736 (264.1 bits), Expect = 3.5e-113, Sum P(2) = 3.5e-113
Identities = 145/342 (42%), Positives = 219/342 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I+++ G+ F V++ Y + P DY++AA+ V+ IH E PGDILVFLTGQ++ID+ ++L
Sbjct: 652 IINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEIL 711
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ +T + L+ILP+YS L Q ++F PTP+G RKVV +TNIAETS+T++GI Y
Sbjct: 712 YDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYY 771
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GF+K YN + IE L+V+PIS+A KCYRLYTE F E+
Sbjct: 772 VVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEML 831
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR NL ++ LKA+GI+++L FD+ PP M+ AL LY L LDD+ KL
Sbjct: 832 ENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKL 891
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T+ G +++ P++P +S+ +LSS + CS+EI+TI ++LS+Q+++ + Q E D K
Sbjct: 892 TN-LGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKK 950
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+F GDH+T LN+Y + Q+ S +C NF+++ + R
Sbjct: 951 AKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKR 992
Score = 413 (150.4 bits), Expect = 3.5e-113, Sum P(2) = 3.5e-113
Identities = 86/171 (50%), Positives = 116/171 (67%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
QRQ LPVY R+ ++ V + +IVGETGSGKTTQI QYL E G+++ G +I CTQPR
Sbjct: 479 QRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG-MIGCTQPR 537
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A +VA R YTIRFED T D T IK++TDG+L RE + DP ++K
Sbjct: 538 RVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TRIKYMTDGMLQREALLDPEMSK 596
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSVIM+DEAHER+++TD+L LLKK R +L++I++SAT+ + S +F
Sbjct: 597 YSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYF 647
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 235/543 (43%), Positives = 349/543 (64%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--RVIACT 101
K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ + + G R +ACT
Sbjct: 99 KKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACT 158
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFED ++ T +K++TDG+LLRE M+DPL
Sbjct: 159 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREAMNDPL 217
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L +Y VI++DEAHER+++TDIL+G+LK++ R R+DL++I+ SAT++A +F
Sbjct: 218 LERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYF------ 271
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHD-KEPPGDIL 280
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E GD+L
Sbjct: 272 ------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 320
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 321 LFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 380
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKAS
Sbjct: 381 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 440
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+ P P
Sbjct: 441 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 500
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+++I+A
Sbjct: 501 ETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 559
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ NFINY
Sbjct: 560 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYR 619
Query: 575 AMV 577
+++
Sbjct: 620 SLM 622
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 725 (260.3 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 146/342 (42%), Positives = 217/342 (63%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I+++ GR F V++ Y + P DY+ AA+ +V+ IH EP GDILVFLTGQ++I+ + + L
Sbjct: 509 IITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEAL 568
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E + +N LIILP+YS L Q ++F PTP G RKV+++TNIAETS+T++GI Y
Sbjct: 569 HERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYY 628
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GF K Y+ +++L V PISKA KCYRLYTE+ + KE+
Sbjct: 629 VVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMI 688
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IPE+QR NL ++ LKA+GI +++ F++ P M+ ALE LY L LDDD L
Sbjct: 689 PNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNL 748
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T+ G ++A++P+EP ++K ++ S E C+EEI++I A+LS+Q+I+ + Q D+ K
Sbjct: 749 TT-LGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQALADQRK 807
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
RF + GDH+T LN+++ + ++ S WC NFI +M R
Sbjct: 808 SRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRR 849
Score = 405 (147.6 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 82/177 (46%), Positives = 121/177 (68%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD-GG--RVIA 99
++QR+ LPVY R+ +L + + +IVGETGSGKTTQI QY+ E G GG ++I
Sbjct: 330 QEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIG 389
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
CTQPRR+A ++VA R YTIRFED T+++ T IK++TDG+L RE ++D
Sbjct: 390 CTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSEN-TVIKYMTDGMLEREALND 448
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
P + +YSVIM+DEAHER+I+TD+L LLK + +L++I++SAT+++ S +F+
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFN 505
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 235/541 (43%), Positives = 346/541 (63%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYL--KEAGWADGGRVIACTQP 103
R+ LPVY+ R L + + + VGETGSGKTTQIPQ++ E + IACTQP
Sbjct: 72 RRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQ-IACTQP 130
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED + + T +K++TDG+LLRE M D +L+
Sbjct: 131 RRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPN-TLLKYMTDGMLLREAMTDHMLS 189
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
+YS I++DEAHER+++TDIL+GL+K++ R DL++I+ SAT++AK +F
Sbjct: 190 RYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYF-------- 241
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
+ +L+V GR + V+I+Y +EP DY++AA+ TVL IH +E PGDILVFL
Sbjct: 242 ---------FDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFL 292
Query: 284 TGQDDIDATIQLLTEEARTS-KKNSSG-LIILPLYSGLSRAEQEQVFSPTPRGK-----R 336
TG+++I+ + +T EA ++ ++G L + PLY L +Q+++F PTP R
Sbjct: 293 TGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGR 352
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KVVISTNIAETSLT++GIVYVVD GFSKQ+ YNP +E+L+V+PISKAS
Sbjct: 353 KVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGR 412
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
KC+RLYTEE F KE+ + PE+ RSNL S V++LK LGID+++ FD+ P PE
Sbjct: 413 TRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPET 472
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
M+RALE L L LDD+ LT P G + +E PL+P ++ M++ S E CS E+++++A+L
Sbjct: 473 MMRALEELNYLNCLDDNGDLT-PLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALL 531
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
S+ +++V A+K DE + +F +GDH+T LN+Y + ++ WC +F+++ A+
Sbjct: 532 SVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRAL 591
Query: 577 V 577
+
Sbjct: 592 I 592
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 720 (258.5 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 151/340 (44%), Positives = 220/340 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
++ V GR V+I Y EE DY+++AV TV+ IH E GDILVFLTG+++I+ T +
Sbjct: 247 LIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKI 306
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E R ++ + LPLYS L +Q ++F +RK ++STNIAETSLT++GIV+
Sbjct: 307 QRETR--ERGLPPMKTLPLYSSLPIYQQSKIFDTCK--ERKCIVSTNIAETSLTIDGIVF 362
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD GFSKQ+ YNP S +E+L+VAPISKAS KC+RLYTE+ F + +
Sbjct: 363 VVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMI 422
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+ PE+ RSNL S V+QL LG+ +++ FD+ P P+ +IRALEVL+ LG LDD+ +L
Sbjct: 423 QQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQL 482
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T G ++E PL+P +SKM++ S E CS EI+TI+A+LS + ++ + + E D AK
Sbjct: 483 TE-IGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAK 541
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
F +GDH+T LN+Y F ++ + WC+ NF+N+ A+
Sbjct: 542 KSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAI 581
Score = 405 (147.6 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 81/172 (47%), Positives = 117/172 (68%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
++R+ LPV+K + + +++ + I+VGETGSGKTTQIPQ++ +AG G+++ TQP
Sbjct: 72 EKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQP 131
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y+IRFE+ ++ T +K+LTDG+LLRE M DP L
Sbjct: 132 RRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSAR-TFMKYLTDGMLLRESMSDPTLN 190
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
KY VI++DEAHER++STDIL GL+K I + R DL+LI+ SAT+EA +F
Sbjct: 191 KYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYF 242
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 231/540 (42%), Positives = 340/540 (62%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R+ LPVY YR L ++ + T I+VGETGSGKTTQ+PQYL EAG++ +VIACTQ
Sbjct: 223 DEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQ 282
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y IRF+D +T IK++TDG+LLRE + DP L
Sbjct: 283 PRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTL 342
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRC--RSDLRLIISSATIEAKSMSAFFHARKG 220
KYS IM+DEAHER++ST+ILL LLK + + DL++II+SATI A+ S FF+
Sbjct: 343 GKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNN--- 399
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGDI 279
P IL++ GR F V+IHY ++P ++Y+QAA++T+ IH +P PGDI
Sbjct: 400 ---------AP-----ILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDI 445
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LVFLTGQD+I+ ++L + +I+ +Y+ L + Q+++F PTP RK+V
Sbjct: 446 LVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIV 505
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
++TNIAETS+T++GI YV+D G+ KQ YNP + +E+LVV P S+AS
Sbjct: 506 LATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGP 565
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
KC+RL+T+ F E+ + PE+QR NL S ++ L +LGI+++LGF++ P EA+I+
Sbjct: 566 GKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIK 625
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
AL +LY+LG L+ KLT TG +++E PL+P+ +K IL+S++ +++II+I A+L+
Sbjct: 626 ALNLLYALGALNTQGKLTK-TGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNES 684
Query: 520 SIWVSGRGAQKEL-DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
S +KEL D+ K F +GD L I++ ++ S S WC FI Y M R
Sbjct: 685 SNLFYRPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKR 744
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 238/553 (43%), Positives = 352/553 (63%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
Q++ LPV+ + A+L + H+T II+ ETG+GKTTQIPQYL E G+ D G +IA TQPR
Sbjct: 69 QKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNG-IIAITQPR 127
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A +++ R Y +RF+D TN+ T +K++TDG+L+RE M D L+K
Sbjct: 128 RVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEK-TKLKYMTDGMLVREAMLDSSLSK 186
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCR---SDLRLIISSATIEAKSMSAFFHARKGR 221
YSVI++DEAHER+++TD+L GLLK IQ+ R + L++II SAT++A+ S +F+
Sbjct: 187 YSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNN---- 242
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH-----DK--- 273
P +L +EGR F VQI+Y EE DYV AA+ TVL IH DK
Sbjct: 243 --------AP-----VLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSIN 289
Query: 274 ----EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
E GDILVFLTG+D+I+ +LL + S LI+ P++S L + +Q +VF
Sbjct: 290 KEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFE 349
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
P+G RKV+++TNIAETSLT+ GI YVVDSG K + +NP I++L + PISKAS
Sbjct: 350 KAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQ 409
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
KCYRLYT+E F K + IPE++RSN+ + ++QLK +GI++IL FD+
Sbjct: 410 RTGRAGREFEGKCYRLYTQETFEK-LDTSSIPEIKRSNIANVILQLKTIGINDILSFDFL 468
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
SPP ++I++LE+L+ L + D+ LT G ++A PL+PM SK ++ S E CSEE+
Sbjct: 469 ESPPVASVIKSLELLFCLDAISDNGSLTE-LGKKMALFPLDPMYSKTLIKSIEFECSEEV 527
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSC--KSSHWCH 567
+ I ++LS++SI+ + + +KE+++ K F + +GDH+TFLN+++ F +S + WC
Sbjct: 528 LIIISILSVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCF 587
Query: 568 KNFINYHAMVRNL 580
+FIN +M++ L
Sbjct: 588 DHFINLKSMIKVL 600
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 695 (249.7 bits), Expect = 1.1e-109, Sum P(2) = 1.1e-109
Identities = 133/340 (39%), Positives = 217/340 (63%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ ++ GR F V + + + P DYV +AV +L IH + GDILVF+TGQ+DI+ T +
Sbjct: 828 VFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATV 887
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E + + L +LP+YS L Q ++F G RK +I+TNIAETSLT++GI+Y
Sbjct: 888 EERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILY 947
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D+G+ K + YNP +++L V PISKA+ +CYRLYTE F E+
Sbjct: 948 VIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELM 1007
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IPE+QR+NL + V+ LK++G+ N+L FD+ PP + ++ ++ L+ LG LDD ++
Sbjct: 1008 DNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQI 1067
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T P G +++E PL+P +SKM++ + +LGC ++I+TI ++LS+ S++ +GA++E D ++
Sbjct: 1068 T-PLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASR 1126
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+F E DH+T L++Y+ + + SS WC +++I+ AM
Sbjct: 1127 EKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAM 1166
Score = 430 (156.4 bits), Expect = 1.1e-109, Sum P(2) = 1.1e-109
Identities = 85/173 (49%), Positives = 122/173 (70%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LP++ R ++ ++ + IIVGETGSGKTTQ+ QYL E G++ G+ I CTQ
Sbjct: 653 KEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGK-IGCTQ 711
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y+IRFED T+ + TAIK++TDG+LLRE +DP L
Sbjct: 712 PRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNE-TAIKYMTDGILLRESFNDPNL 770
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
KYS I++DEAHERS++TD+L G+LKK+ R D++LI++SAT+++K S FF
Sbjct: 771 DKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFF 823
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 241/547 (44%), Positives = 344/547 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD-GGRVIACTQ 102
K R+ LPV+ R L + + + VGETGSGKTTQIPQ++ G+ +ACTQ
Sbjct: 89 KTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQ 148
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y IRFE+ + T +K++TDG+LLRE M+D L
Sbjct: 149 PRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPK-TILKYMTDGMLLREAMEDHDL 207
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
T+YS I++DEAHER+++TDIL+GLLK++ R DL++II SAT++A+ +F+
Sbjct: 208 TRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNN----- 262
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
P +L+V GR V+I+Y E DY+ AA+ TVL IH E GDIL+F
Sbjct: 263 -------AP-----LLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLF 310
Query: 283 LTGQDDI-DATIQLLTE-EARTSKKNSSGLIILPLYSGLSRAEQEQVF-----SPTPRGK 335
LTG+++I DA ++ E + ++N L + PLY L +Q+++F +P P G+
Sbjct: 311 LTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGR 370
Query: 336 --RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
RKV+ISTNIAETSLT++GIVYVVD GFSKQ+ YNP +E+L+V+PISKAS
Sbjct: 371 PGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGR 430
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPP 453
KC+RLYTEE F KE+ + PE+ RSNL S V++LK LGID+++ FD+ P
Sbjct: 431 AGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPA 490
Query: 454 PEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
PE M+RALE L L L D+ LT+ G ++ PL+PM++ M++ S CSEEI+TI
Sbjct: 491 PETMMRALEELNYLQCLSDEGDLTA-LGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIV 549
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKS---SH-WCHKN 569
A+LS+ +++V A+K DEAKL FA A+GDH+T +N+Y+ F+ S +H WC N
Sbjct: 550 AMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDN 609
Query: 570 FINYHAM 576
F++Y ++
Sbjct: 610 FLSYRSL 616
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 237/546 (43%), Positives = 343/546 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYL--KEAGWADGGRVIACT 101
K R+ LPV+ R L L + + + VGETGSGKTTQIPQ++ E + +V ACT
Sbjct: 88 KIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQV-ACT 146
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA R Y+IRFE+ T+ T +K++TDG+LLRE M+D
Sbjct: 147 QPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK-TILKYMTDGMLLREAMEDHD 205
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L++YS I++DEAHER+++TDIL+GLLK++ + R DL++II SAT++A+ +F+
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN----- 260
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
+ +L+V GR + V+++Y E DY+ +A+ TVL IH E GDIL+
Sbjct: 261 ------------DAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILL 308
Query: 282 FLTGQDDI-DATIQLLTEEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTPR---GK- 335
FLTG+D+I DA ++ E + ++ G L + PLY L +Q+++F P P G+
Sbjct: 309 FLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRP 368
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RKVVISTNIAETSLT++GIVYVVD GFSKQ+ YNP +E+L+V+PISKAS
Sbjct: 369 GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRA 428
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RLYTEE F KE+ + PE+ RSNL S V++LK LGID+++ FD+ P P
Sbjct: 429 GRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAP 488
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E M+RALE L L LDD+ LT P G ++ PL+PM++ M++ S E CS+EI+TI A
Sbjct: 489 ETMMRALEELNYLACLDDEGNLT-PLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVA 547
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH----WCHKNF 570
+LS+ ++++ +K D+AK FA +GDH+T LN+Y F + WC ++
Sbjct: 548 MLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHY 607
Query: 571 INYHAM 576
+NY ++
Sbjct: 608 LNYRSL 613
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 239/546 (43%), Positives = 333/546 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR-VIACTQ 102
K R+ LPV+ R L L + + VGETGSGKTTQIPQ++ R +IACTQ
Sbjct: 94 KTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQ 153
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y+IRFED T+ T +K++TDG+LLRE M+D L
Sbjct: 154 PRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPK-TLLKYMTDGMLLREAMNDHEL 212
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
++YS I++DEAHER++STD+L+GLLK++ + R DL++II SAT++A+ +F+
Sbjct: 213 SRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFN------ 266
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
+ +L+V GR V+I Y EP DYV+AA+ TVL IH E GDIL+F
Sbjct: 267 -----------DAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLF 315
Query: 283 LTGQDDI-DATIQLLTEEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTP-------R 333
LTG+++I DA ++ E ++ +G L + LY L Q+++F P P R
Sbjct: 316 LTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGR 375
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
RKV++STNIAETSLT++GIVYVVD GFSKQ+ YNP +E+L+V+PISKAS
Sbjct: 376 PGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGR 435
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPP 453
KC+RLYTE F KE+ + PE+ RSNL S V++LK LGID+++ FD P
Sbjct: 436 AGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPA 495
Query: 454 PEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
PE ++RALE L L LDDD LT P G +E PL+P ++ M++SS E CS EI++I+
Sbjct: 496 PETLMRALEELNYLACLDDDGNLT-PLGRLASEFPLDPALAVMLISSPEFYCSNEILSIT 554
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH---WCHKNF 570
A+LS+ I+V +K DE K FA +GDH+T LN Y F + WCH +F
Sbjct: 555 ALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHF 614
Query: 571 INYHAM 576
++ ++
Sbjct: 615 LSLRSL 620
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 675 (242.7 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 137/340 (40%), Positives = 215/340 (63%)
Query: 240 VEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEE 299
+ GR F V +H+ P DYV +AV VL IH + PGDILVF+TGQ+DI+AT +L+ E
Sbjct: 360 IPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDER 419
Query: 300 ARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVD 359
+ + L ILP+YS + +Q ++F G RKV+++TNIAETSLT++GI++VVD
Sbjct: 420 LKLLN-DPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVD 478
Query: 360 SGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEG 419
SG+SK + YNP ++ L + PIS+A+ K YRLYTE + E+ +
Sbjct: 479 SGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQT 538
Query: 420 IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSP 479
IPE+QR++L + V+ LK+LG+ ++L FD+ PP E + +L L+SLG LD+ LT
Sbjct: 539 IPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTH- 597
Query: 480 TGFQVAEIPLEPMISKMILSSNE-LGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
G Q+ P++P ++K+I+++ E GCSEE++TI ++LS+ +++ + Q+E D A+ +
Sbjct: 598 LGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREK 657
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
F E DH+T L++Y + + S HWC K+F++ + R
Sbjct: 658 FFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRR 697
Score = 405 (147.6 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 85/172 (49%), Positives = 116/172 (67%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP + R +L ++ + ++VGETGSGKTTQ+ Q+L E G+A G +I CTQP
Sbjct: 183 EQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFG-MIGCTQP 241
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T + TAIK++TDGVLLRE + L
Sbjct: 242 RRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPN-TAIKYMTDGVLLRESLVQTDLD 300
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
KYS I++DEAHER+++TD+L+GLLKKI R DL+LI++SAT+ A+ S FF
Sbjct: 301 KYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFF 352
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 662 (238.1 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 131/340 (38%), Positives = 212/340 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 240 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 299
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 300 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 358
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +NP ++ L + PIS+A+ +C+RLYT+ + E+
Sbjct: 359 VIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELL 418
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 419 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 478
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 479 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 537
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+T+LN+Y + + S+ WC+ +FI+ AM
Sbjct: 538 EKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 577
Score = 414 (150.8 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 82/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 66 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 124
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T++ T IK++TDG+LLRE + + L
Sbjct: 125 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTDGILLRESLREADLD 183
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ ++FF
Sbjct: 184 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 235
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 662 (238.1 bits), Expect = 3.3e-105, Sum P(2) = 3.3e-105
Identities = 131/340 (38%), Positives = 212/340 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 701 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 760
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 761 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 819
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +NP ++ L + PIS+A+ +C+RLYT+ + E+
Sbjct: 820 VIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELL 879
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 880 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 939
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 940 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 998
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+T+LN+Y + + S+ WC+ +FI+ AM
Sbjct: 999 EKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 1038
Score = 418 (152.2 bits), Expect = 3.3e-105, Sum P(2) = 3.3e-105
Identities = 83/172 (48%), Positives = 121/172 (70%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 585
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+++ T IK++TDG+LLRE + + L
Sbjct: 586 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TLIKYMTDGILLRESLREADLD 644
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ +AFF
Sbjct: 645 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 696
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 662 (238.1 bits), Expect = 4.2e-105, Sum P(2) = 4.2e-105
Identities = 131/340 (38%), Positives = 212/340 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 700 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 759
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 760 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 818
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +NP ++ L + PIS+A+ +C+RLYT+ + E+
Sbjct: 819 VIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELL 878
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 879 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 938
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 939 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 997
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+T+LN+Y + + S+ WC+ +FI+ AM
Sbjct: 998 EKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 1037
Score = 417 (151.9 bits), Expect = 4.2e-105, Sum P(2) = 4.2e-105
Identities = 82/172 (47%), Positives = 121/172 (70%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 526 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 584
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+++ T IK++TDG+LLRE + + L
Sbjct: 585 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TLIKYMTDGILLRESLREADLD 643
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS +++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ +AFF
Sbjct: 644 HYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 695
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 217/533 (40%), Positives = 332/533 (62%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
Q++ LP+ KYR +LY VE + TI++G TG GKTTQIPQ+L EAGWA +I CTQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
RL ++V+ R Y+I+F D + T IK++TDG+LL E+ DPLL +
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQF-DHNVSEKTKIKYMTDGILLNEIFFDPLLER 139
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGL 224
YS++++DE HER++STD+LLG+LK+I R+D RL++SSA+++A +S FF
Sbjct: 140 YSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFF--------- 190
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
G + V +S+EG+ F V+ ++++P +YV +A+ TV+ I+ PPGDILVFL+
Sbjct: 191 -GQDKV-----CTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLS 244
Query: 285 GQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNI 344
G+ +I+ I+ + + + ++ L+ LPL++GL+ EQ +VF+ RKV+ STNI
Sbjct: 245 GRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNI 304
Query: 345 AETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYR 404
AETS+T++GIVYVVDSGF+KQR YNP + L+ PISK+S K +R
Sbjct: 305 AETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFR 364
Query: 405 LYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVL 464
LYTE+ + + E ++ ++ V+ LK LG+ NIL F + PP ++ ALE L
Sbjct: 365 LYTEKAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDL 423
Query: 465 YSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS 524
Y LGVLD+ LT P G Q++ L+ ISK +L+SN+ GC+ EI++I+++L+ ++ +
Sbjct: 424 YLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYN 483
Query: 525 GRGAQK-ELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+ K + A F A EGD +T LN+++ F+ + K WC KN++NY +
Sbjct: 484 PTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTL 536
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 662 (238.1 bits), Expect = 1.1e-104, Sum P(2) = 1.1e-104
Identities = 131/340 (38%), Positives = 212/340 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 702 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 761
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 762 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 820
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +NP ++ L + PIS+A+ +C+RLYT+ + E+
Sbjct: 821 VIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELL 880
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 881 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 940
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 941 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 999
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+T+LN+Y + + S+ WC+ +FI+ AM
Sbjct: 1000 EKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAM 1039
Score = 413 (150.4 bits), Expect = 1.1e-104, Sum P(2) = 1.1e-104
Identities = 82/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL + G+ D G +I CTQP
Sbjct: 528 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYG-MIGCTQP 586
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+++ T IK++TDG+LLRE + + L
Sbjct: 587 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TLIKYMTDGILLRESLREADLD 645
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A +AFF
Sbjct: 646 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFF 697
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 658 (236.7 bits), Expect = 2.4e-104, Sum P(2) = 2.4e-104
Identities = 130/340 (38%), Positives = 212/340 (62%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 701 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 760
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 761 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 819
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +NP ++ L + PIS+A+ +C+RLYT+ + E+
Sbjct: 820 VIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELL 879
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 880 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 939
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 940 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 998
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+++LN+Y + + S+ WC+ +FI+ AM
Sbjct: 999 EKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAM 1038
Score = 414 (150.8 bits), Expect = 2.4e-104, Sum P(2) = 2.4e-104
Identities = 82/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 585
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T++ T IK++TDG+LLRE + + L
Sbjct: 586 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTDGILLRESLREADLD 644
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ ++FF
Sbjct: 645 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 642 (231.1 bits), Expect = 4.1e-104, Sum P(2) = 4.1e-104
Identities = 129/340 (37%), Positives = 212/340 (62%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR F V + + PV DYV AV VL IH GDILVF+TGQ+DI+ T +L+ E
Sbjct: 474 TIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRE 533
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
+ + L ILP+YS + Q ++F P G RK +++TNIAETSLT++GI+YVV
Sbjct: 534 RL-DALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVV 592
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
D+G+SK + YNP ++ L + PIS+A+ K +RL+TE+ F E+ +
Sbjct: 593 DAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQ 652
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
IPE+QR+NL + ++ +K+LG+ ++L FD+ PP + M +L L++LG LD+ +T
Sbjct: 653 TIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTD 712
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
G ++ P++P ++K+I+ + E GC+EE+ITI ++LS+ +++ + Q+E D A+ +
Sbjct: 713 -LGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREK 771
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
F E DH+TFL++Y + + S WC ++F++ ++ R
Sbjct: 772 FFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRR 811
Score = 420 (152.9 bits), Expect = 4.1e-104, Sum P(2) = 4.1e-104
Identities = 85/172 (49%), Positives = 119/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP + R ++ ++ + I+VGETGSGKTTQ+ Q+L E G+ G +I CTQP
Sbjct: 298 EQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLG-MIGCTQP 356
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+KD T IK++TDGVLLRE +++P L
Sbjct: 357 RRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKD-TVIKYMTDGVLLRESLNEPDLD 415
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+YS I++DEAHER+++TD+L+GL KKI + R DL+LI++SAT+ AK S FF
Sbjct: 416 RYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFF 467
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 660 (237.4 bits), Expect = 3.2e-103, Sum P(2) = 3.2e-103
Identities = 135/340 (39%), Positives = 210/340 (61%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L IH GDIL+F+ GQ+DI+ T +
Sbjct: 732 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQI 791
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 792 VERL-ADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 850
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVDSG+ K + +NP ++ L V PIS+A+ +CYRLYT+ F E+
Sbjct: 851 VVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEML 910
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
IPE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 911 TTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGAL 970
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
T PTG + E PL+P +SKM++ S ++ CS +I+ I ++LS+ SI+ +G ++E D+ +
Sbjct: 971 T-PTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVR 1029
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+F+ E DH+T+LN+Y + + SS WC+ +FI+ AM
Sbjct: 1030 EKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAM 1069
Score = 402 (146.6 bits), Expect = 3.2e-103, Sum P(2) = 3.2e-103
Identities = 79/172 (45%), Positives = 117/172 (68%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ R +L ++ + I+VGETGSGKTTQ+ QYL E G+ G ++ CTQP
Sbjct: 558 EQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYG-MVGCTQP 616
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T++ T IK++TDG+LLRE + + L
Sbjct: 617 RRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEK-TMIKYMTDGILLRESLRESDLD 675
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS +++DEAHERS++TD+L GLL+++ RSDL+LI++SAT+++ ++FF
Sbjct: 676 HYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFF 727
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 648 (233.2 bits), Expect = 9.1e-103, Sum P(2) = 9.1e-103
Identities = 134/340 (39%), Positives = 214/340 (62%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR + V I + + P SDYV+AAV VL IH +P GDILVF+TGQ+DI+AT +++ +
Sbjct: 663 TIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIAD 722
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
++ L ILP+YS + Q ++F G RKVV++TNIAETSLT+ GI YVV
Sbjct: 723 RLN-QLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVV 781
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
D+G+ K + YN I+ L V PIS+A+ YRLYTE +++E+
Sbjct: 782 DTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFET 841
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
+PE+QR+NL + V+ LK+LG++ I FD+ PP + ++ +L L++LG LD+ KLT+
Sbjct: 842 TLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTT 901
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
G +++ P++P +SK+I+ + + C+EEIITI ++LS+ S++ + +E D A+ +
Sbjct: 902 -LGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREK 960
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
F E DH+ LNIY+ + ++ S+ WC K+F++ + R
Sbjct: 961 FNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKR 1000
Score = 408 (148.7 bits), Expect = 9.1e-103, Sum P(2) = 9.1e-103
Identities = 84/172 (48%), Positives = 116/172 (67%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP + R +L ++ + I+VGETGSGKTTQ+ Q+L E G+ G +I CTQP
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG-MIGCTQP 545
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y+IRFED T D T IK++TDGVLLRE + L
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TVIKYMTDGVLLRESLMQNNLE 604
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
KYSVI++DEAHERS++TDIL+GLLKK+ R D++L+++SAT+ ++ S FF
Sbjct: 605 KYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFF 656
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 650 (233.9 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 142/368 (38%), Positives = 217/368 (58%)
Query: 211 MSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLI 270
MSA +A + +G E I + GR + VQIHY P DY+ A + T+ +
Sbjct: 247 MSATLNAERFSEFFDGAE--------ICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQL 298
Query: 271 HDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSP 330
H K PPGDILVFLTGQD+I+A L+ ++ N + PL++ L + +Q QVF P
Sbjct: 299 HTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLP 358
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXX 390
RKVV+STNIAETS+T+ GI YV+D+G +K + +N +E+L V PIS+++
Sbjct: 359 ALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQR 418
Query: 391 XXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
+CYR+YTE F K +P E IPE++R +L V+ LKA G ++++ F +
Sbjct: 419 SGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMD 477
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P E ++RALE LYS+G LDD+ + G+Q++ IPL P +++ +L++ E C E+I
Sbjct: 478 PPSKEGLLRALEHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARAVLAAREHNCLSEVI 536
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH--WCHK 568
+ + LS S+++ + + E EA+L+F +EGD +T LN + +L+S S WC +
Sbjct: 537 DVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQ 596
Query: 569 NFINYHAM 576
NFIN A+
Sbjct: 597 NFINRRAL 604
Score = 388 (141.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 78/172 (45%), Positives = 117/172 (68%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LP+++ + ++ + ++VGETGSGK+TQIPQ+L E +A G +A TQP
Sbjct: 91 EQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEG-CVAITQP 149
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +A R Y+IRF+D T+K T IK+LTDG+LLRE+++DP+L+
Sbjct: 150 RRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKK-TRIKYLTDGMLLRELINDPILS 208
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+Y +++DEAHER++ TD+LLG +KKI + R LR+II SAT+ A+ S FF
Sbjct: 209 QYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFF 260
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 632 (227.5 bits), Expect = 7.7e-102, Sum P(2) = 7.7e-102
Identities = 129/338 (38%), Positives = 209/338 (61%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR F V + + + DYV++AV L +H GD+L+F+ GQ+DI+ T ++L E
Sbjct: 705 TIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVL-E 763
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
E N+ L ILP+YS L Q ++F + G RK V++TNIAETSLT++GI+YV+
Sbjct: 764 ERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVI 823
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
DSG+ K + YNP ++ L + PIS+A+ + YRLYT+ + E+ A
Sbjct: 824 DSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLAL 883
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
+PE+QR+NL + V+ LK+LG+ ++L F + PP + ++ +L L+ LG LD LT+
Sbjct: 884 TVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTT 943
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
G Q+AE PL+P +M++ + +GCS E++ I ++LS+ SI+ +G + E D + +
Sbjct: 944 -LGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREK 1002
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
F E DH+T+LN+Y+ + Q+ SS WC+++FI+ AM
Sbjct: 1003 FQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAM 1040
Score = 417 (151.9 bits), Expect = 7.7e-102, Sum P(2) = 7.7e-102
Identities = 85/172 (49%), Positives = 118/172 (68%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR+ LPV+ R +L ++ ++ IIVGETGSGKTTQ+ QYL E G++ G +I CTQP
Sbjct: 529 EQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRG-MIGCTQP 587
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+ + T IK++TDG+LLRE + DP L
Sbjct: 588 RRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTS-ERTVIKYMTDGILLRESLRDPELD 646
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS+STD+L GLL++I R DL+LI++SAT+++ + FF
Sbjct: 647 SYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF 698
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 225/544 (41%), Positives = 327/544 (60%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E QR+ LP+++ R +L + +++GETGSGKTTQIPQYL E G + G +IA TQ
Sbjct: 59 ELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAVTQ 117
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A+R YT+RFED T++D T IKFLTDG+LLRE + D LL
Sbjct: 118 PRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSED-TRIKFLTDGMLLREAISDSLL 176
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFFHA 217
KYS +++DEAHER+I TD+L G++K Q+ R +L ++I+ SAT++ S +F+
Sbjct: 177 RKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNR 236
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG 277
P +L +EGR +QI Y ++P DY+ AA+ +V IH + P
Sbjct: 237 ------------AP-----VLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPAS 279
Query: 278 -DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
DILVFLTGQ++I+A + + AR +++LPLY+ L ++Q +VF P+G R
Sbjct: 280 QDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYR 339
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KV+ISTNIAETS+T+ GI YVVD+G K + YNP S +E L V +SK
Sbjct: 340 KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGR 399
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP-- 454
CYRLYTE+ F K +PE+QR NL S ++QL A+ + N+L FD+ + P P
Sbjct: 400 EDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDH 458
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
EA I L++L +L DD LT P G ++A PLEP +K IL S++ C+EEI+TI
Sbjct: 459 IEAAIAQLDLLGALEHKDDQLTLT-PIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIV 517
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINY 573
++LS+ S+ + + E+ + +F ++EGDH+T LNIY+ F + WC +NF+N
Sbjct: 518 SLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNS 577
Query: 574 HAMV 577
M+
Sbjct: 578 KNML 581
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 219/477 (45%), Positives = 305/477 (63%)
Query: 129 YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLK 188
Y++RF++ + T IK++TDG+L+REMM DPLL KYSVIM+DEAHERS+ TD+L+GLLK
Sbjct: 136 YSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLK 195
Query: 189 KIQRCRSD----------LRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAIL 238
K+Q+ R+ L+LIISSAT+ A FF+ + + IL
Sbjct: 196 KVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFNYNQTNDKSKDTS-------TIL 248
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
S+EGR + V IHY+EE S+Y+Q + T++ IH +PPGDILVFLTGQ++I+ IQ L +
Sbjct: 249 SIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDD 308
Query: 299 EARTSKKNSSG-----------LIILPLYSGLSRAEQEQVFSPTPRGK--RKVVISTNIA 345
+ ++ +LP+YSGLS +Q +VF K RK++ISTNIA
Sbjct: 309 KFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIA 368
Query: 346 ETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRL 405
ETS+T++G+VYVVD GF K + Y+ S +E+LV+ P SK+S KCYRL
Sbjct: 369 ETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRL 428
Query: 406 YTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLY 465
YTE + K +P + IPE+QRSNL + ++QLKALGIDNIL FD+ + PP ++IR LEVLY
Sbjct: 429 YTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLY 488
Query: 466 SLGVLDDDAKLTSPTGFQVAEIPLEPMISKMIL--SSNELGCSEEIITISAVLSIQSIWV 523
LG LDD+ KLT+PTG +AE P +P SKMI+ SSN CS+E ITI+A+L+IQ ++
Sbjct: 489 GLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFT 548
Query: 524 SGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVRNL 580
+ Q +++ EGDH+T LNI+ F+ + S WC+++ INY AM R L
Sbjct: 549 N----QNH--KSRKHLLVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVL 599
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 138/316 (43%), Positives = 195/316 (61%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR LP+Y+ R ILYL+E ++T +I+G TG GK+TQIPQYL E+GW+DG R I CTQ
Sbjct: 49 QQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQ 108
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXX-YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
PRR+A ++A R Y++RF++ + T IK++TDG+L+REMM DPL
Sbjct: 109 PRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPL 168
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----------LRLIISSATIEAKSM 211
L KYSVIM+DEAHERS+ TD+L+GLLKK+Q+ R+ L+LIISSAT+ A
Sbjct: 169 LLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDF 228
Query: 212 SAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH 271
FF+ + + ILS+EGR + V IHY+EE S+Y+Q + T++ IH
Sbjct: 229 FNFFNYNQTNDKSKDTS-------TILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIH 281
Query: 272 DKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSG-----------LIILPLYSGLS 320
+PPGDILVFLTGQ++I+ IQ L ++ ++ +LP+YSGLS
Sbjct: 282 TTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLS 341
Query: 321 RAEQEQVFSPTPRGKR 336
+Q +VF K+
Sbjct: 342 INKQIKVFESVGDSKK 357
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 223/544 (40%), Positives = 329/544 (60%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
QR+ LP+++ R +L + +++GETGSGKTTQIPQYL EAG G +IA TQPR
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQG-IIAVTQPR 78
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A ++A+R YT+RF+D T+ D T IKFLTDG+LLRE + DP+L K
Sbjct: 79 RVAAISLATRVSDEKRTELGKLVGYTVRFDDLTS-DETRIKFLTDGMLLREAIGDPILRK 137
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFFHARK 219
YSV+++DEAHER+I TD+L G++K Q+ R +L ++I+ SAT++ S +F+
Sbjct: 138 YSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNG-- 195
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG-D 278
P +L +EGR +Q+ Y ++P SDY+QAA+ +V IH + P D
Sbjct: 196 ----------AP-----VLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQD 240
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
ILVFLTGQ++I+A + + A+ + ++PLY+ L ++Q +VF P+G RKV
Sbjct: 241 ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKV 300
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
++STNIAETS+T+ GI YVVD+G K + YNP +E L V +SKA
Sbjct: 301 ILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGRED 360
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQ---RSNLVSCVIQLKALGIDNILGFDWPASPPPE 455
CYRLYTE+ F K +PE+Q R NL S ++QL AL I NIL FD+ + P P+
Sbjct: 361 SGICYRLYTEDEFEK-FDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPD 419
Query: 456 AMIRALEVLYSLGVLD--DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
A+ A+E L LG ++ +D + +P G ++A PLEP SK IL S + C+EEI+TI
Sbjct: 420 AIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIV 479
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINY 573
++LS+ S+ + + E+ + +F ++EGDH+T LN+Y+ F + WC +NF+N
Sbjct: 480 SLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNG 539
Query: 574 HAMV 577
M+
Sbjct: 540 RNMM 543
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 223/544 (40%), Positives = 325/544 (59%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD-GGRVIACTQ 102
K R+ LPV+++R L + + VGETGSGKTTQIPQY+ +++ACTQ
Sbjct: 102 KTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQ 161
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y+IRFE+ T T +K++TDG LLRE + DP +
Sbjct: 162 PRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPS-TILKYMTDGQLLRETIHDPNM 220
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
T+YS I++DEAHER+++TDIL+ LLK++ RSDL++II SAT++A +F
Sbjct: 221 TRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYF------- 273
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
E IL+V GR V+I Y E DY++A+V TVL IH E GDIL+F
Sbjct: 274 ----------FEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLF 323
Query: 283 LTGQDDI-DATIQLLTEEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTP-------R 333
LTG+++I D ++ E + G + + PLY L +Q+++F+ P R
Sbjct: 324 LTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGR 383
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
RK +++TNIAETSLT++GIVYVVD GFSKQ+ YN +E+L+V PIS+AS
Sbjct: 384 PGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGR 443
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPP 453
KC+RLYTE F KE+ + PE+ RSNL + +++LK LG+D+++ FD+ P
Sbjct: 444 AGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPA 503
Query: 454 PEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
PE M+RALE L L L+DD LT G +E PL+P ++ M++SS E CS E+++++
Sbjct: 504 PETMMRALEELNYLSCLNDDGDLTD-LGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVT 562
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL-QSCKSSH---WCHKN 569
++LS+ +++ +K DE K F EGDH+T LN Y F + K + WCH++
Sbjct: 563 SLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEH 622
Query: 570 FINY 573
F++Y
Sbjct: 623 FLSY 626
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 222/543 (40%), Positives = 327/543 (60%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E+QR+ LP+++ R +L + + +++GETGSGKTTQIPQYL E G +IA TQ
Sbjct: 75 EQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQA-IIAVTQ 133
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A+R YT+RF+D T+ D T IKFLTDG+LLRE + D LL
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDD-TKIKFLTDGMLLREAISDCLL 192
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFFHA 217
KYS I++DEAHER++ TD+L G++K Q+ R +L ++++ SAT++ S +F+
Sbjct: 193 RKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNG 252
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG 277
P +L +EGR +QI Y ++P DY+ AA+ +V IH + P
Sbjct: 253 ------------AP-----VLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSS 295
Query: 278 -DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
DILVFLTGQ++I+A + + A+ +++LPLY+ L A+Q +VF P+G R
Sbjct: 296 HDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYR 355
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KV+ISTNIAETS+T+ GI YVVD+G K + YNP S +E L V +SK
Sbjct: 356 KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGR 415
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
CYRLYTE+ F K +PE+QR NL S ++QL A+ I N+L FD+ + P P+
Sbjct: 416 EDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDH 474
Query: 457 MIRALEVLYSLGVLDD-DAKLT-SPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
+ A+ L LG L+ D +LT +P G ++A PLEP +K IL S + C+EEI+TI A
Sbjct: 475 IQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVA 534
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ SI + + E+ + +F ++EGDH+T LN+Y+ F + + WC +NF+N
Sbjct: 535 LLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSK 594
Query: 575 AMV 577
M+
Sbjct: 595 NMM 597
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 219/538 (40%), Positives = 325/538 (60%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E QR+ LP+++ R +L + +++GETGSGKTTQIPQYL E G + G +IA TQ
Sbjct: 68 ELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAVTQ 126
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A+R YT+RF+D T++D T IKFLTDG+LLRE + D LL
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TRIKFLTDGMLLREAISDSLL 185
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFFHA 217
KYS +++DEAHER+I TD+L G++K Q+ R +L ++I+ SAT++ S +F+
Sbjct: 186 RKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG 245
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG 277
P +L +EGR +Q+ Y ++P +DY+ AA+ +V IH + P
Sbjct: 246 ------------AP-----VLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSS 288
Query: 278 -DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
DILVFLTGQ++I+A + + A+ +++LPLY+ L A+Q +VF P+G R
Sbjct: 289 QDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYR 348
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KV+ISTNIAETS+T+ GI YVVD+G K + YNP S +E L V +SK
Sbjct: 349 KVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGR 408
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
CYRLYTE+ F K +PE+QR NL S ++QL A+ + N+L FD+ + P P+
Sbjct: 409 EDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDH 467
Query: 457 MIRALEVLYSLGVLD--DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
+ A+ L LG L+ DD +P G ++A PLEP +K IL S + C+EEI+TI +
Sbjct: 468 IQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVS 527
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFIN 572
+LS+ S+ + ++E+ + +F ++EGDH+T LNIY+ F + WC +NF+N
Sbjct: 528 LLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVN 585
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 618 (222.6 bits), Expect = 5.4e-100, Sum P(2) = 5.4e-100
Identities = 127/340 (37%), Positives = 205/340 (60%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 701 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 760
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 761 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 819
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+DSG+ K + +P +L + I K +C RLYT+ + E+
Sbjct: 820 VIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELL 878
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR+NL + V+ LK+LG+ ++L F + PP + M+ ++ L+ LG LD+ L
Sbjct: 879 TTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGL 938
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
TS TG + E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+ +
Sbjct: 939 TS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIR 997
Query: 537 LRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+FA E DH+++LN+Y + + S+ WC+ +FI+ AM
Sbjct: 998 EKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAM 1037
Score = 414 (150.8 bits), Expect = 5.4e-100, Sum P(2) = 5.4e-100
Identities = 82/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 585
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T++ T IK++TDG+LLRE + + L
Sbjct: 586 RRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTDGILLRESLREADLD 644
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ ++FF
Sbjct: 645 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 221/544 (40%), Positives = 335/544 (61%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA-DGGRVIACTQPR 104
+++LPV++ R+ +L L+ + +I+GETGSGKTTQ+ QYL E G+A D G+ I TQPR
Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPR 406
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A +VA R Y+IRFED T+ + T +KF+TDG+LLRE + D L K
Sbjct: 407 RVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDK 466
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGL 224
YS +++DEAHERS++TDILLG K + R DL+LII+SAT+ AK SAFF + +
Sbjct: 467 YSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFF-GNAPQFTI 525
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
G R P + ++ VQ YVE VS V+ + L +D GDIL+F+T
Sbjct: 526 PG-----RTFP-VQTIYTSN-PVQ-DYVEAAVSQAVK-----IHLANDCSS-GDILIFMT 571
Query: 285 GQDDIDATIQLLTEEART--SKKNSSG-------LIILPLYSGLSRAEQEQVFSPTPRGK 335
GQ+DI+ T L E+ SKK + + ILP+YS L Q ++F K
Sbjct: 572 GQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTK 631
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK++I+TNIAETSLT++GI YV+D G+SK + YNP +++LV+ PISKA+
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAG 691
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI-DNILGFDWPASPPP 454
YRLYTE+ F +++ + IPE+QR+NL + ++ LK+L + D + F + PP
Sbjct: 692 RTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPL 751
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
+ + +L L+ +G +D +LT P G Q+A+ PL+P +SK++L + GCS+E++TI +
Sbjct: 752 QTFLSSLYELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVS 810
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+LS+ ++ + QKE D A+ +F A+ DH+T LN+++ + + SSHWC+K+F+ Y
Sbjct: 811 MLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYK 870
Query: 575 AMVR 578
++VR
Sbjct: 871 SLVR 874
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 214/514 (41%), Positives = 308/514 (59%)
Query: 72 GETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTI 131
GETGSGKTTQ+PQYL E G G VIA TQPRR+A ++A+R YT+
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQG-VIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTV 64
Query: 132 RFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQ 191
RF+D +++D T IKFLTDG+LLRE + D LL KYS I++DEAHER++ TD+L G++K Q
Sbjct: 65 RFDDVSSED-TRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQ 123
Query: 192 RCRSDLR-----LIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFN 246
R R +LR +I+ SAT++ S +F+ ++L +EGR
Sbjct: 124 RRRKELRKLPLKVIVMSATMDVDLFSQYFNGA-----------------SVLYLEGRQHP 166
Query: 247 VQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG-DILVFLTGQDDIDATIQLLTEEARTSKK 305
+Q+ Y ++P DY+ AA+ +V IH + P DILVFLTGQ++I+A + + A+
Sbjct: 167 IQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPD 226
Query: 306 NSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQ 365
+++LPLY+ L A+Q +VF P+G RKV+I+TNIAETS+T+ GI YVVD+G K
Sbjct: 227 GCPSMLVLPLYASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKA 286
Query: 366 RFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQR 425
+ YNP S +E L V +SK CYRLYTE F K +PE+QR
Sbjct: 287 KKYNPDSGLEVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEK-FEKMTVPEIQR 345
Query: 426 SNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLD-DDAKLT-SPTGFQ 483
NL S ++QL A+ + N+L FD+ + P P+ M A+ L LG L+ D +LT +P G +
Sbjct: 346 CNLASVLLQLLAMKVPNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRK 405
Query: 484 VAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE 543
+A PLEP +K IL S + C+EEI+TI ++LS+ S+ + + E+ + +F ++E
Sbjct: 406 MAAFPLEPKFAKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSE 465
Query: 544 GDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMV 577
GDH+T LNIY+ F WC +NF+N M+
Sbjct: 466 GDHITLLNIYRTFKSLGGDKDWCRENFVNSRNMM 499
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 490 (177.5 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 101/247 (40%), Positives = 159/247 (64%)
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
+RK+++STNI ETS+T++ IVYV+DSG KQ+ YNP S IE+LV P SKAS
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RL+T++ F+ ++ IPE+QR + S ++ LK+LG+D+I+ FD+ P P
Sbjct: 862 GRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSP 920
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNE-LGCSEEIITIS 513
+I+ LE+LYSLG L+D+ LT TG ++AE P + SKMILS+ E C +EI+ ++
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVA 979
Query: 514 AVLS-IQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
++L+ +I+ +G +KE + K F GD + FLNIYK ++ S+ +C+ +F+
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFL 1039
Query: 572 NYHAMVR 578
YH +++
Sbjct: 1040 QYHTLIK 1046
Score = 365 (133.5 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 73/172 (42%), Positives = 116/172 (67%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
+R+RLP+Y YR IL ++ + I+VGETGSGK+TQ+ QYL E + G +I CTQPR
Sbjct: 434 ERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII-CTQPR 492
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A A+A+R Y IRF++ T+ + T I ++TDG+ LR ++ +P L
Sbjct: 493 RIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTS-EATKIMYMTDGMFLRLLLYNPTLED 551
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
SV+++DEAHER++ TD++L ++K I R ++R++ISSAT++A+ +S +F+
Sbjct: 552 ISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Score = 158 (60.7 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 37/92 (40%), Positives = 50/92 (54%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I V GR +NV I+Y S+Y+ A V T+L IH + GDILVFL GQ +I+ Q L
Sbjct: 607 IFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQEL 666
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVF 328
+ L+ILP+YS L Q ++F
Sbjct: 667 ENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 490 (177.5 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 101/247 (40%), Positives = 159/247 (64%)
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
+RK+++STNI ETS+T++ IVYV+DSG KQ+ YNP S IE+LV P SKAS
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
KC+RL+T++ F+ ++ IPE+QR + S ++ LK+LG+D+I+ FD+ P P
Sbjct: 862 GRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSP 920
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNE-LGCSEEIITIS 513
+I+ LE+LYSLG L+D+ LT TG ++AE P + SKMILS+ E C +EI+ ++
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVA 979
Query: 514 AVLS-IQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
++L+ +I+ +G +KE + K F GD + FLNIYK ++ S+ +C+ +F+
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFL 1039
Query: 572 NYHAMVR 578
YH +++
Sbjct: 1040 QYHTLIK 1046
Score = 365 (133.5 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 73/172 (42%), Positives = 116/172 (67%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
+R+RLP+Y YR IL ++ + I+VGETGSGK+TQ+ QYL E + G +I CTQPR
Sbjct: 434 ERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII-CTQPR 492
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A A+A+R Y IRF++ T+ + T I ++TDG+ LR ++ +P L
Sbjct: 493 RIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTS-EATKIMYMTDGMFLRLLLYNPTLED 551
Query: 165 YSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
SV+++DEAHER++ TD++L ++K I R ++R++ISSAT++A+ +S +F+
Sbjct: 552 ISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Score = 158 (60.7 bits), Expect = 3.7e-95, Sum P(3) = 3.7e-95
Identities = 37/92 (40%), Positives = 50/92 (54%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I V GR +NV I+Y S+Y+ A V T+L IH + GDILVFL GQ +I+ Q L
Sbjct: 607 IFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQEL 666
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVF 328
+ L+ILP+YS L Q ++F
Sbjct: 667 ENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 495 (179.3 bits), Expect = 2.5e-94, Sum P(2) = 2.5e-94
Identities = 102/265 (38%), Positives = 159/265 (60%)
Query: 312 ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPI 371
I P+YS LS +Q ++F RK+++STNIAETSLTL+GI YV+D+G+ K + YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYDL--RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 372 SDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSC 431
++ L V PIS+A+ CYRLYTE F+ ++ IPE+QRSNL +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 432 VIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEP 491
V+ LK+L + N+ FD+ P E++I +L L+ LG ++++ LT G ++ + PL+P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTD-IGRKMVQFPLDP 950
Query: 492 MISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLN 551
+SK+++ S C++EI+ I ++LS SI++ + + ++ K +F E DH+T LN
Sbjct: 951 PLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLN 1010
Query: 552 IYKGFLQSCKSSHWCHKNFINYHAM 576
IY + S WC KNFI Y A+
Sbjct: 1011 IYLQWRSHNYSYSWCTKNFIQYKAL 1035
Score = 485 (175.8 bits), Expect = 2.5e-94, Sum P(2) = 2.5e-94
Identities = 120/255 (47%), Positives = 158/255 (61%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
K ++ LP+YK + +L V + IIVGETGSGKTTQI QYL E G+ G +I CTQP
Sbjct: 474 KLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-IICCTQP 532
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T KD T I+++TDG+LLRE ++D L
Sbjct: 533 RRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKD-TKIRYVTDGILLRETLNDKELD 591
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
KYSVI++DEAHERSI+TD+LLG+LK I R+DL+LI++SATI+AK SAFF G
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFF----GNAP 647
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
+ ++ R + N Y+E V +Q VS +D GDIL+F+
Sbjct: 648 IYNIQ--GRTFKVHIEYLRTPCN---DYIECAVQKAIQIHVSDNN--YDNNF-GDILIFM 699
Query: 284 TGQDDIDATIQLLTE 298
TGQ+DI+AT LL+E
Sbjct: 700 TGQEDINATCYLLSE 714
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 495 (179.3 bits), Expect = 2.5e-94, Sum P(2) = 2.5e-94
Identities = 102/265 (38%), Positives = 159/265 (60%)
Query: 312 ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPI 371
I P+YS LS +Q ++F RK+++STNIAETSLTL+GI YV+D+G+ K + YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYDL--RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 372 SDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSC 431
++ L V PIS+A+ CYRLYTE F+ ++ IPE+QRSNL +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 432 VIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEP 491
V+ LK+L + N+ FD+ P E++I +L L+ LG ++++ LT G ++ + PL+P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTD-IGRKMVQFPLDP 950
Query: 492 MISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLN 551
+SK+++ S C++EI+ I ++LS SI++ + + ++ K +F E DH+T LN
Sbjct: 951 PLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLN 1010
Query: 552 IYKGFLQSCKSSHWCHKNFINYHAM 576
IY + S WC KNFI Y A+
Sbjct: 1011 IYLQWRSHNYSYSWCTKNFIQYKAL 1035
Score = 485 (175.8 bits), Expect = 2.5e-94, Sum P(2) = 2.5e-94
Identities = 120/255 (47%), Positives = 158/255 (61%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
K ++ LP+YK + +L V + IIVGETGSGKTTQI QYL E G+ G +I CTQP
Sbjct: 474 KLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-IICCTQP 532
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R YTIRFED T KD T I+++TDG+LLRE ++D L
Sbjct: 533 RRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKD-TKIRYVTDGILLRETLNDKELD 591
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRG 223
KYSVI++DEAHERSI+TD+LLG+LK I R+DL+LI++SATI+AK SAFF G
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFF----GNAP 647
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFL 283
+ ++ R + N Y+E V +Q VS +D GDIL+F+
Sbjct: 648 IYNIQ--GRTFKVHIEYLRTPCN---DYIECAVQKAIQIHVSDNN--YDNNF-GDILIFM 699
Query: 284 TGQDDIDATIQLLTE 298
TGQ+DI+AT LL+E
Sbjct: 700 TGQEDINATCYLLSE 714
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 922 (329.6 bits), Expect = 1.8e-92, P = 1.8e-92
Identities = 196/438 (44%), Positives = 283/438 (64%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLII 201
T IK+LTDG+LLRE + D LLTKYS I++DEAHER+ISTDIL LLK + R R+D +LI+
Sbjct: 722 TIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIV 781
Query: 202 SSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQ 261
+SAT++A+ S +F I ++ G+ F V+I + +EP SDYV+
Sbjct: 782 TSATLDAEKFSTYF-----------------FNSPIFTIPGKIFPVEILHSKEPESDYVE 824
Query: 262 AAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSG-LIILPLYSGLS 320
A++ TVL IH E PGDILVFLTGQD+I+ ++L E + + S LIILP+YS L
Sbjct: 825 ASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLP 884
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
Q +F P P G RK +++TNIAE SLT++GI +V+D GF K + Y+ D+++L+VA
Sbjct: 885 SEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVA 944
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
PISKA+ KCYRLYTEE + E+ +PE+QR NL S V+ LKALGI
Sbjct: 945 PISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGI 1004
Query: 441 DNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS 500
++ L FD+ SP E +I +LE LY LG LDD+ LT G ++A P+EP +SK++L+S
Sbjct: 1005 NDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTS 1063
Query: 501 NELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSC 560
C+++++TI ++LS+Q+I+ + D+ K +F +GD +T+LNIY + ++
Sbjct: 1064 LNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENS 1123
Query: 561 KSSHWCHKNFINYHAMVR 578
S++WCH+NFI A+ R
Sbjct: 1124 FSNYWCHENFIQSRALKR 1141
Score = 444 (161.4 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 98/218 (44%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR +LP+Y + ++ +E + I++GETGSGKTTQIPQYL EA + + G ++ CTQP
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCTQP 684
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A ++A R Y+IRF+D T+ D T IK+LTDG+LLRE + D LLT
Sbjct: 685 RRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSND-TIIKYLTDGMLLRETLSDTLLT 743
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
KYS I++DEAHER+ISTDIL LLK + R R+D +LI++SAT++A+ S +F
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
G+ + VE++ EP VE V IH E P
Sbjct: 804 PGK--IFPVEILHSKEPESDYVEASLITVLNIHLNEHP 839
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 922 (329.6 bits), Expect = 1.8e-92, P = 1.8e-92
Identities = 196/438 (44%), Positives = 283/438 (64%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLII 201
T IK+LTDG+LLRE + D LLTKYS I++DEAHER+ISTDIL LLK + R R+D +LI+
Sbjct: 722 TIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIV 781
Query: 202 SSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQ 261
+SAT++A+ S +F I ++ G+ F V+I + +EP SDYV+
Sbjct: 782 TSATLDAEKFSTYF-----------------FNSPIFTIPGKIFPVEILHSKEPESDYVE 824
Query: 262 AAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSG-LIILPLYSGLS 320
A++ TVL IH E PGDILVFLTGQD+I+ ++L E + + S LIILP+YS L
Sbjct: 825 ASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLP 884
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
Q +F P P G RK +++TNIAE SLT++GI +V+D GF K + Y+ D+++L+VA
Sbjct: 885 SEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVA 944
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
PISKA+ KCYRLYTEE + E+ +PE+QR NL S V+ LKALGI
Sbjct: 945 PISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGI 1004
Query: 441 DNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS 500
++ L FD+ SP E +I +LE LY LG LDD+ LT G ++A P+EP +SK++L+S
Sbjct: 1005 NDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTS 1063
Query: 501 NELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSC 560
C+++++TI ++LS+Q+I+ + D+ K +F +GD +T+LNIY + ++
Sbjct: 1064 LNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENS 1123
Query: 561 KSSHWCHKNFINYHAMVR 578
S++WCH+NFI A+ R
Sbjct: 1124 FSNYWCHENFIQSRALKR 1141
Score = 444 (161.4 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 98/218 (44%), Positives = 137/218 (62%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QR +LP+Y + ++ +E + I++GETGSGKTTQIPQYL EA + + G ++ CTQP
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCTQP 684
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A ++A R Y+IRF+D T+ D T IK+LTDG+LLRE + D LLT
Sbjct: 685 RRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSND-TIIKYLTDGMLLRETLSDTLLT 743
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK---- 219
KYS I++DEAHER+ISTDIL LLK + R R+D +LI++SAT++A+ S +F
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 220 -GRRGLEGVELVPRLEPAILSVEGRGFNV-QIHYVEEP 255
G+ + VE++ EP VE V IH E P
Sbjct: 804 PGK--IFPVEILHSKEPESDYVEASLITVLNIHLNEHP 839
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 211/543 (38%), Positives = 318/543 (58%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACT 101
++ R+ LPV++Y+ +L ++ + II+GETGSGKTTQ+PQYL E G+ D G++ IA T
Sbjct: 217 QEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAIT 276
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +VA+R Y IRFED T + T +K++TDG+LLRE + D
Sbjct: 277 QPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSK 336
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L+KYS IM+DEAHER+++TDIL+GLLK I R L+L+ISSAT+ AK S FF
Sbjct: 337 LSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF------ 390
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGDIL 280
+ P I +V GR + V IHY +P ++Y+ AA++T+ IH + PGDIL
Sbjct: 391 ------DNCP-----IFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++I+ T L E + +II P+Y+ L + +Q ++F PTP RKVV+
Sbjct: 440 VFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVL 499
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXX 400
+TNIAETSLT++GI YV+D GF K+ Y P + + L+ P S+AS
Sbjct: 500 ATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPG 559
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KC+R++T+ ++ E+ PE+ R+NL + V+ L +LG+ +++ F P + ++
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS--NEL--GCSEEIITISAVL 516
LE LY LG L+ +T G + E P EP +K++ ++ +E G EE +TI ++L
Sbjct: 620 LENLYILGALNSKGTITR-LGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSML 678
Query: 517 -SIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHA 575
S+++ QK D A + E DH+ +L I+ + S S WC + I +
Sbjct: 679 HETPSLFIG----QKR-DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKT 733
Query: 576 MVR 578
M+R
Sbjct: 734 MLR 736
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 210/555 (37%), Positives = 325/555 (58%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA----DGG--R 96
++QR+ LP + R +L + + TI++GETGSGKTTQ+ Q+L E G+ G R
Sbjct: 352 QQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKR 411
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
+IACTQPRR+A +VA R Y+IRFED T+ T IK++T+G+LLRE+
Sbjct: 412 IIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREI 471
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
+ DP+L YS I++DEAHERS++TDILLGL K + R DL+LI++SAT+ A + FF
Sbjct: 472 LADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF- 530
Query: 217 ARKGRRGLEGVELVP-RLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
G+ +P R P + +V + YVE V + + ++
Sbjct: 531 ------GVAPQFHIPGRTFPVEVFFNR---DVNMDYVEMAVKQVLTIHLGRWNADNNNAN 581
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GDILVF+TGQ+DI+ T L+ E+ + + L I P+YS + + Q+++F+ T +
Sbjct: 582 DGDILVFMTGQEDIEITCDLIKEKLNLLE-DPPPLDIFPIYSTMPQDLQKKIFNKTNLQR 640
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RKVV++TNIAETSLT++GI YV+D G K + YNP ++ L V PIS A+
Sbjct: 641 RKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAG 700
Query: 396 XXXXXKCYRLYTEEYFVKE-IPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
YRLYTE+ + + + IPE+QRSNL + ++ LK+L +++I F + PPP
Sbjct: 701 RTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPF-LDPPP 759
Query: 455 EAMIR-ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSN--ELGCSEEIIT 511
+ ++ +L L+++G LD+ +LT G + + P+EP ++K+IL S E CSEE++T
Sbjct: 760 KDLLNCSLYDLWAIGALDNLGELTK-LGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVT 818
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGF---LQSCKSSH---- 564
I A+LS+ +I+ + E D A+ +F +E DH+T LN++ + L K ++
Sbjct: 819 IVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKIN 878
Query: 565 -WCHKNFINYHAMVR 578
WC+KNF+ ++ R
Sbjct: 879 NWCNKNFLQLKSLYR 893
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 186/439 (42%), Positives = 278/439 (63%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLII 201
T +K++TDG+LLRE +++P L YSV+M+DEAHER++ TDIL GL+K I R R DL+L+I
Sbjct: 456 TVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLI 515
Query: 202 SSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQ 261
SSAT++A+ S+FF + I + GR F V I+Y + P +DYV
Sbjct: 516 SSATLDAEKFSSFFD-----------------DAPIFRIPGRRFPVDIYYTQAPEADYVD 558
Query: 262 AAVSTVLLIHDKEP-PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS 320
AA+ T++ IH +P PGDILVFLTGQ++I+ + L E ++ LI LP+Y+ L
Sbjct: 559 AAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLP 618
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
Q ++F PTP+ RKVV++TNIAETS+T++GI YV+D GFSKQ ++ S +E+L V
Sbjct: 619 SDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVV 678
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
ISKA+ KC+RLYT + E+ + IPE+QR+NL + V+ LK+LGI
Sbjct: 679 TISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGI 738
Query: 441 DNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS 500
+++ FD+ PP E ++ ALE LY+LG L+ +LT G ++AE P +P +SKMI++S
Sbjct: 739 HDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIAS 797
Query: 501 NELGCSEEIITISAVLSIQS-IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
+ CSEEI+TI+A+LS + ++ + D A+ F + GDH+T +N+Y + +S
Sbjct: 798 EKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQES 857
Query: 560 CKSSHWCHKNFINYHAMVR 578
S WC +N++ + M R
Sbjct: 858 SFSQRWCVENYVQHRTMKR 876
Score = 471 (170.9 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 92/173 (53%), Positives = 125/173 (72%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E+ R+ LPVY +R A + V+ H II GETGSGKTTQ+PQYL EAG+ +GG+ I CTQ
Sbjct: 358 EETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQ 417
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T++ T +K++TDG+LLRE +++P L
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TVLKYMTDGMLLREFLNEPDL 476
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSV+M+DEAHER++ TDIL GL+K I R R DL+L+ISSAT++A+ S+FF
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFF 529
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 186/439 (42%), Positives = 278/439 (63%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLII 201
T +K++TDG+LLRE +++P L YSV+M+DEAHER++ TDIL GL+K I R R DL+L+I
Sbjct: 456 TVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLI 515
Query: 202 SSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQ 261
SSAT++A+ S+FF + I + GR F V I+Y + P +DYV
Sbjct: 516 SSATLDAEKFSSFFD-----------------DAPIFRIPGRRFPVDIYYTQAPEADYVD 558
Query: 262 AAVSTVLLIHDKEP-PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS 320
AA+ T++ IH +P PGDILVFLTGQ++I+ + L E ++ LI LP+Y+ L
Sbjct: 559 AAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLP 618
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
Q ++F PTP+ RKVV++TNIAETS+T++GI YV+D GFSKQ ++ S +E+L V
Sbjct: 619 SDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVV 678
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
ISKA+ KC+RLYT + E+ + IPE+QR+NL + V+ LK+LGI
Sbjct: 679 TISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGI 738
Query: 441 DNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS 500
+++ FD+ PP E ++ ALE LY+LG L+ +LT G ++AE P +P +SKMI++S
Sbjct: 739 HDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIAS 797
Query: 501 NELGCSEEIITISAVLSIQS-IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
+ CSEEI+TI+A+LS + ++ + D A+ F + GDH+T +N+Y + +S
Sbjct: 798 EKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQES 857
Query: 560 CKSSHWCHKNFINYHAMVR 578
S WC +N++ + M R
Sbjct: 858 SFSQRWCVENYVQHRTMKR 876
Score = 471 (170.9 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 92/173 (53%), Positives = 125/173 (72%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E+ R+ LPVY +R A + V+ H II GETGSGKTTQ+PQYL EAG+ +GG+ I CTQ
Sbjct: 358 EETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQ 417
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA+R Y+IRFED T++ T +K++TDG+LLRE +++P L
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TVLKYMTDGMLLREFLNEPDL 476
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YSV+M+DEAHER++ TDIL GL+K I R R DL+L+ISSAT++A+ S+FF
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFF 529
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 205/551 (37%), Positives = 324/551 (58%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPR 104
+ ++LP+Y+Y+ ++ VE + I+ GETGSGKTTQ+PQYL +AG + GR I TQPR
Sbjct: 14 ESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGR-IGVTQPR 72
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTK 164
R+A VA R Y +RF+D + KD T IK++TDG LLRE++ DP LT+
Sbjct: 73 RVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKD-TMIKYMTDGCLLREILADPSLTQ 131
Query: 165 YSVIMVDEAHERSISTDILLGLLKK--IQRCRSD---LRLIISSATIEAKSMSAFFHARK 219
YS++++DEAHERS++TD+LLGLLKK ++ R + L++++ SAT+E + +S+F+
Sbjct: 132 YSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFY---- 187
Query: 220 GRRGLEGVELVP-RLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
G V +P R P V+ N+ I ++ S YV+ V L +H E GD
Sbjct: 188 ---GNCPVFTIPGRTYP----VKETFCNL-IGPKDKESSVYVKEVVKMTLDVHTNEAAGD 239
Query: 279 ILVFLTGQDDIDATIQLLTEEAR-------TSKKNSSGLIILPLYSGLSRAEQEQVFSPT 331
ILVFLTGQ +I+ LL E+A ++ GL+IL LY + +Q Q+F P
Sbjct: 240 ILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPA 299
Query: 332 PRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXX 391
P+G RK V++TNIA TSLT++GI Y+VDSGF KQ +N ++ L V PISK+
Sbjct: 300 PKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRA 359
Query: 392 XXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 451
KC+R+Y+++++ +P IPE+QR++L S ++ LK LG+ +++ F +
Sbjct: 360 GRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDC 419
Query: 452 PPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P ++ AL+ LY +D ++T G + E PL P +++ +L + LGC + ++
Sbjct: 420 PEERFILTALKQLYQYDAIDRRGEVTK-LGRLMVEFPLPPNLTRALLKAAALGCEDIMLP 478
Query: 512 ISAVLSIQSIWVS-GRGA-QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH----W 565
++A+LS+++I++ G+ QKE + AA G FL + F + C++S W
Sbjct: 479 VAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVF-EKCRASENPSAW 537
Query: 566 CHKNFINYHAM 576
C +N+I++ A+
Sbjct: 538 CKENWIHWRAV 548
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 764 (274.0 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 88 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 147
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 148 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 207
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 328 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 386
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 387 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 429
Score = 141 (54.7 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
++ V+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFF 83
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 764 (274.0 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 150/343 (43%), Positives = 226/343 (65%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 88 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 147
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
+ R L++LP+Y+ L Q ++F PTP G RKVV++TNIAETSLT+EGI+Y
Sbjct: 148 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 207
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
V+D GF KQ+ YNP + +E+L V P SKAS KC+RLYT + E+
Sbjct: 208 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 267
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ ALE LY+LG L+ +L
Sbjct: 268 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 327
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ-SIWVSGRGAQKELDEA 535
T+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+ SI+ + D A
Sbjct: 328 TT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNA 386
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 387 RVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 429
Score = 141 (54.7 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
++ V+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFF 83
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 206/544 (37%), Positives = 311/544 (57%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
E+Q++ LPV+ R IL +E + T +I+ ETGSGKTTQIPQ+L AG+A G +I TQ
Sbjct: 62 EQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG-MIGITQ 120
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A VA R YT+RFED T++ T I+FLTDGVLLRE + D LL
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSR-ATKIRFLTDGVLLRESIKDRLL 179
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
KYSVI++DEAHER+++ D+L G++K Q+ R +L + + +M
Sbjct: 180 LKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN- 238
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG-DILV 281
+G+ L EGR + V++ + +E DY+ + T+ IH P D+L+
Sbjct: 239 -CKGMYL-----------EGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLI 286
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIS 341
FLTGQ++I++ Q + + A+ ++ L + LY+ LS+ +Q + F PTP RKV+++
Sbjct: 287 FLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILA 346
Query: 342 TNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXK 401
TNIAETS+T+ GI V+D GF K++ +N + ++ L ISKA
Sbjct: 347 TNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGT 406
Query: 402 CYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR-A 460
CYR YT+ A PE+ R+N S V+QL AL ID FD+ PP E +R A
Sbjct: 407 CYRAYTKAEMDSFADATQ-PEILRTNPTSMVLQLLALDID-CNNFDF-LDPPLEDGLRSA 463
Query: 461 LEVLYSLGVLD--DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
+ L +LG + DD+ +T P G Q+ + PL+P SK++L+++ GC EEI+++ +VLS
Sbjct: 464 YKSLDALGAIKTGDDSYIT-PLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSS 522
Query: 519 QSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMV- 577
++VS + A +F + GDH+T LN++ GFL+S K WCH N++N ++
Sbjct: 523 DHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTY 582
Query: 578 -RNL 580
RN+
Sbjct: 583 ARNV 586
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 204/548 (37%), Positives = 318/548 (58%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LP+ ++R A++ V I+ GETGSGK+TQ+P+YL EAG A G I TQPRR+A
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHG-AIGVTQPRRVAT 59
Query: 109 QAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA R Y +RF+D ++++ TAIK++TDG LLR ++ DPLL+KYS+I
Sbjct: 60 ISVAQRVAEEMGCALGSVVGYQVRFDDCSSEE-TAIKYMTDGCLLRHILADPLLSKYSII 118
Query: 169 MVDEAHERSISTDILLGLLKKI--QRC----RSDLRLIISSATIEAKSMSAFFHARKGRR 222
++DEAHERS+STDIL GLLKK+ Q ++++++++ SAT+E +S FF
Sbjct: 119 ILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFF------- 171
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
G V +P + + F + + S YV AV L IH EP GDILVF
Sbjct: 172 GHCSVLHIPGRSYPVKEI----FCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVF 227
Query: 283 LTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
LTGQ +I+ LL ++A + ++ GL+ILPLY +S +Q+++F P P+G
Sbjct: 228 LTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAPKGI 287
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK V+STNIA TSLT+EG+ YVVDSGF KQ +NP ++ L V PISK+
Sbjct: 288 RKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAG 347
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPE 455
K YRLY+ E++ + +P +PE++R++L S ++ LK L + +++ F + P
Sbjct: 348 RTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEER 407
Query: 456 AMIRALEVLYSLGVLDDDAK-LTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
++ AL+ LY +D + + G + + PL P +S ++ + L C + ++ I+A
Sbjct: 408 HILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAA 467
Query: 515 VLSIQSIWVSGRGAQKELDEAKLR---FAAAEG---DHVTFLNIYKGFLQSCKSSHWCHK 568
+LS++++++ QK+ EA+L+ ++ G D T LNI++ S S WCHK
Sbjct: 468 MLSVENVFIRPGDPQKQ-KEAELQHQELSSQVGGCNDFATLLNIFEQCKASKSPSAWCHK 526
Query: 569 NFINYHAM 576
+I++ A+
Sbjct: 527 YWIHWRAV 534
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 774 (277.5 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 178/516 (34%), Positives = 296/516 (57%)
Query: 78 KTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRXXXXX-----XXXXXXXXXYTIR 132
KTT + + + GG IA TQPRR+A ++A R Y++R
Sbjct: 194 KTTIVQENGSKKEAVVGG-CIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVR 252
Query: 133 FEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQR 192
F+ + T +KFLT+G+LL+EM+ DP LTKYS I+VDE HER ++ D+++G L+ +
Sbjct: 253 FDTSVSPS-TRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVS 311
Query: 193 CRSD------LRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFN 246
+ + L+ ++ SAT + +S+ FF R L+ E + A+ ++GR F
Sbjct: 312 GKREGRGGVPLKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCHIKGRQFP 371
Query: 247 VQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGDILVFLTGQDDIDATIQLLTEEARTSKK 305
V+ Y EPV D+V AA+ + IH KEP PGDILVFLTGQ+ ++A L+ E A
Sbjct: 372 VKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVNEYATGMDP 431
Query: 306 NSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQ 365
+ + +LPL++ L +A Q++VF P P RK++++TNIAETS+T+ G+ YVVD G +K
Sbjct: 432 SLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKI 491
Query: 366 RFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQR 425
+ + +++L+V PISK++ +CYRLYTE+ ++ + PE+ R
Sbjct: 492 KQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLA-LDEVNTPEILR 550
Query: 426 SNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVA 485
+L ++ +KA G+DN++ F + PP EA+ +AL L S+ LD+ K+ S TG +A
Sbjct: 551 CDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKI-SETGSHIA 609
Query: 486 EIPLEPMISKMILSSNELG--CSEEIITISAVLSIQSIWVSGRGAQK-ELDEAKLR-FAA 541
++PL P + +++L++++ G C ++I I + LS+++I+++ +K E EA R
Sbjct: 610 KLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYR 669
Query: 542 AEGDHVTFLNIYKGFL-QSCKSSHWCHKNFINYHAM 576
EGDH+T L + + ++ W ++ +++ AM
Sbjct: 670 REGDHLTMLATVRAYASENTDRKAWAERHLVSHRAM 705
Score = 104 (41.7 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW 91
R+ LP++ + I + + +++GETGSGK+TQIPQ+L + W
Sbjct: 144 RKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESW 189
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 411 (149.7 bits), Expect = 8.0e-85, Sum P(3) = 8.0e-85
Identities = 81/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 533 EQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 591
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+++ T IK++TDG+LLRE + + L
Sbjct: 592 RRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSEN-TIIKYMTDGILLRESLREADLD 650
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+L+++SAT++A ++FF
Sbjct: 651 NYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFF 702
Score = 283 (104.7 bits), Expect = 8.0e-85, Sum P(3) = 8.0e-85
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDILVF+ GQ+DI+ T + +
Sbjct: 707 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQI 766
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +K + L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 767 VEHLEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 825
Query: 357 VVDSGFSK 364
V+DSG+ K
Sbjct: 826 VIDSGYCK 833
Score = 223 (83.6 bits), Expect = 8.0e-85, Sum P(3) = 8.0e-85
Identities = 46/117 (39%), Positives = 78/117 (66%)
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
AL + +S G + LTS TG Q+ E PL+P +SKM++ S ++GCS EI+ I ++LS+
Sbjct: 867 ALLLPFSGGFIPPGG-LTS-TGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP 924
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+I+ +G ++E D+ + +FA E DH+T+LN+Y + + S+ WC+++FI+ AM
Sbjct: 925 AIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAM 981
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 411 (149.7 bits), Expect = 9.9e-85, Sum P(3) = 9.9e-85
Identities = 81/172 (47%), Positives = 120/172 (69%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E G+ D G +I CTQP
Sbjct: 530 EQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQP 588
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A +VA R Y IRFED T+++ T IK++TDG+LLRE + + L
Sbjct: 589 RRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSEN-TIIKYMTDGILLRESLREADLD 647
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
YS I++DEAHERS++TD+L GLL+++ RSDL+L+++SAT++A ++FF
Sbjct: 648 NYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFF 699
Score = 283 (104.7 bits), Expect = 9.9e-85, Sum P(3) = 9.9e-85
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDILVF+ GQ+DI+ T + +
Sbjct: 704 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQI 763
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +K + L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 764 VEHLEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 822
Query: 357 VVDSGFSK 364
V+DSG+ K
Sbjct: 823 VIDSGYCK 830
Score = 222 (83.2 bits), Expect = 9.9e-85, Sum P(3) = 9.9e-85
Identities = 42/101 (41%), Positives = 71/101 (70%)
Query: 476 LTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEA 535
LTS TG Q+ E PL+P +SKM++ S ++GCS EI+ I ++LS+ +I+ +G ++E D+
Sbjct: 876 LTS-TGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQV 934
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+ +FA E DH+T+LN+Y + + S+ WC+++FI+ AM
Sbjct: 935 REKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAM 975
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 193/504 (38%), Positives = 303/504 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR-VIACTQ 102
K R+ LPVY+++ I+ +E++ T+++GETGSGK+TQIPQ++ E + IA TQ
Sbjct: 76 KMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQ 135
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +A+R Y++RF++ T T +K+LTDG+LLRE+M + L
Sbjct: 136 PRRVAAINLATRVAQEHGCKLGEQVGYSVRFDN-TTTTRTRLKYLTDGMLLRELMMNSDL 194
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKK-IQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
+YSVI++DEAHER++ TD++LG LK IQ R DLR+I+ SAT++A+ S FF+
Sbjct: 195 REYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNN---- 250
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
P IL VEGR F+V+ +Y++ P D V A + + I+ E GDIL
Sbjct: 251 --------AP-----ILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILC 297
Query: 282 FLTGQDDIDATIQLLTEEAR-TSKKNSSGLII-LPLYSGLSRAEQEQVFSPTPRGKRKVV 339
FL GQ++ID + ++ + A+ S + LI+ PLY+ L +Q VF+P KRKVV
Sbjct: 298 FLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVV 357
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
STNIAETS+T+ G+ +VVDSG K + + + L+ PIS+AS
Sbjct: 358 FSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESE 417
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
K +RLY E +VK +P + PE+ RS++ S V+ LK G+D++L + W +P EA++
Sbjct: 418 GKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVM 476
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
L+ LY LG LD K+T G Q+A +PL+P +S +++ ++E+GC ++I I + LS++
Sbjct: 477 GLQELYELGALDTRGKITK-RGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVE 535
Query: 520 SIWVSGRGAQK-ELDEAKLRFAAA 542
++ ++ ++ E++E +L A
Sbjct: 536 NLLLNPSPEERDEVNERRLSLCNA 559
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 184/452 (40%), Positives = 275/452 (60%)
Query: 129 YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLK 188
YT+RF+D T++D T IKFLTDG+LLRE + D LL KYS +++DEAHER+I TD+L G++K
Sbjct: 63 YTVRFDDVTSED-TRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVK 121
Query: 189 KIQRCRSDL-----RLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGR 243
Q+ R +L ++I+ SAT++ S +F+ P +L +EGR
Sbjct: 122 AAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG------------AP-----VLYLEGR 164
Query: 244 GFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG-DILVFLTGQDDIDATIQLLTEEART 302
+Q+ Y ++P +DY+ AA+ +V IH + P DILVFLTGQ++I+A + + A+
Sbjct: 165 QHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKH 224
Query: 303 SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGF 362
+++LPLY+ L A+Q +VF P+G RKV+ISTNIAETS+T+ GI YVVD+G
Sbjct: 225 LPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGM 284
Query: 363 SKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPE 422
K + YNP S +E L V +SK CYRLYTE+ F K +PE
Sbjct: 285 VKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPE 343
Query: 423 MQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLD--DDAKLTSPT 480
+QR NL S ++QL A+ + N+L FD+ + P P+ + A+ L LG L+ DD +P
Sbjct: 344 IQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPM 403
Query: 481 GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA 540
G ++A PLEP +K IL S + C+EEI+TI ++LS+ S+ + ++E+ + +F
Sbjct: 404 GRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFI 463
Query: 541 AAEGDHVTFLNIYKGFLQSCKSSHWCHKNFIN 572
++EGDH+T LNIY+ F + WC +NF+N
Sbjct: 464 SSEGDHMTLLNIYRTFKNLGGNKDWCKENFVN 495
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 202/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R I+ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI+
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 SSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI+
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 SSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI+
Sbjct: 113 SVAQRVAEEMKCALGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 SSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 190
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI+
Sbjct: 191 SVAQRVAEEMKCALGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVII 249
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 250 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 305
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 306 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 358
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 359 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 418
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 419 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 478
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 479 SSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 537
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 538 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 596
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 597 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 655
Query: 571 INYHAM 576
I++ +
Sbjct: 656 IHWRCL 661
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI+
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 SSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/546 (36%), Positives = 315/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP L+K+SVI+
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y++E++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 ASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 200/546 (36%), Positives = 314/546 (57%)
Query: 50 PVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQ 109
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAAI 112
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y +RF+D ++K+ TAIK++TDG LL+ ++ DP L K+SVI+
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSMSAFFHARKGRRGL 224
+DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF G +
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFF----GNCPI 227
Query: 225 EGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
++ RL P V + N+ I + + Y+QA V + IH E GDILVFLT
Sbjct: 228 --FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 280
Query: 285 GQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
GQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P P G RK
Sbjct: 281 GQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRK 340
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+
Sbjct: 341 CVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT 400
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F + PP E +
Sbjct: 401 ASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPY-LDPPNERL 459
Query: 458 I-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
I AL+ LY +D +T G + E PL P ++ ++ + L C + ++ I+A+L
Sbjct: 460 ILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 517 SIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----HWCHKNF 570
S++++++ QKE ++ AA G F + F Q CKSS WC K++
Sbjct: 519 SVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPASWCQKHW 577
Query: 571 INYHAM 576
I++ +
Sbjct: 578 IHWRCL 583
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 191/491 (38%), Positives = 290/491 (59%)
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
VIA TQPRR+A +VA R Y IRFED T T IK+LTDGVLLRE
Sbjct: 51 VIAITQPRRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSK-TRIKYLTDGVLLRES 109
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCR-SDLRLIISSATIEAKSMSAFF 215
+ +P+L YSVI++DEAHERS++TDILLGL+K++ R R S+ +++I+SAT++ + +S FF
Sbjct: 110 LSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFF 169
Query: 216 HARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKE 274
P +L+V G+ + V+I Y +E PVS Y+++++ + IH +E
Sbjct: 170 SG------------CP-----VLNVPGKLYPVEILYSKERPVS-YIESSLKVAIDIHVRE 211
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSS-GLIILPLYSGLSRAEQEQVFSPTPR 333
P GDIL+F+TGQDDI+ + L E+ R+ + S II PL+ L Q +VFSP P
Sbjct: 212 PEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPP 271
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
R+ ++STNIAETSLT++G+VYV+DSG+ KQR YNP S + +L V ISK
Sbjct: 272 NCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGR 331
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNI--LGFDWPAS 451
KCYRLY + + IPE+QR++L V+ LK+L + +I L FD+ +
Sbjct: 332 AGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDA 391
Query: 452 PPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P E++ AL+ LY + +D++ +T G ++++PLEP +S+ ++ +NE GC + +T
Sbjct: 392 PSSESLEDALKQLYFIDAIDENGAITR-IGRTMSDLPLEPSLSRTLIEANETGCLSQALT 450
Query: 512 ISAVLSIQSIWVSGRGAQKEL----DE-AKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWC 566
+ A+LS ++ + R E DE + L + GDH+ L I++ + ++ WC
Sbjct: 451 VVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWC 510
Query: 567 HKNFINYHAMV 577
+N + MV
Sbjct: 511 KENGMQVRGMV 521
Score = 385 (140.6 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 93/215 (43%), Positives = 131/215 (60%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LP+ ++ I+ VE ++ +I+GETGSGK+TQ+ Q L G+ G VIA TQPRR+A
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSG-VIAITQPRRVAA 62
Query: 109 QAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA R Y IRFED T T IK+LTDGVLLRE + +P+L YSVI
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSK-TRIKYLTDGVLLRESLSNPMLDDYSVI 121
Query: 169 MVDEAHERSISTDILLGLLKKIQRCR-SDLRLIISSATIEAKSMSAFFHARKGRR--G-L 224
++DEAHERS++TDILLGL+K++ R R S+ +++I+SAT++ + +S FF G L
Sbjct: 122 ILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKL 181
Query: 225 EGVELVPRLEPAILSVEGR-GFNVQIHYVEEPVSD 258
VE++ E + +E + IH V EP D
Sbjct: 182 YPVEILYSKERPVSYIESSLKVAIDIH-VREPEGD 215
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 442 (160.7 bits), Expect = 7.4e-79, Sum P(2) = 7.4e-79
Identities = 112/295 (37%), Positives = 162/295 (54%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA----DGGRVI 98
++ R LP+ I+ + + II G TGSGKTTQ+PQ+L EAG++ + +I
Sbjct: 392 QESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMI 451
Query: 99 ACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
A TQPRR+A ++A R Y IRF+ N D TAIKF+TDG+LLRE+
Sbjct: 452 AITQPRRVAAVSIAKRVSEELTGFSSKVS-YQIRFDSTINPD-TAIKFMTDGILLRELSS 509
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHAR 218
D LLT YS ++VDEAHERS++TDILLGLL +I R R ++ S + + K + +
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREM----SKSDQKVKPLKLIIMSA 565
Query: 219 KGR-RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPG 277
R +L+ + P I+ ++ R + V IH+ DY+Q A V LIH + P G
Sbjct: 566 TLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAG 625
Query: 278 DILVFLTGQDDIDATIQLLTEE-ARTSKKNSSGLIILPLYSGLSRAEQEQVFSPT 331
ILVFLTGQ +++ Q+L + R+ + S I+ +S E E + S T
Sbjct: 626 SILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMS-VENEDLQSET 679
Score = 393 (143.4 bits), Expect = 7.4e-79, Sum P(2) = 7.4e-79
Identities = 84/238 (35%), Positives = 133/238 (55%)
Query: 287 DDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAE 346
+DID + + + T S + +LPLYS L+ +Q +VF +P G R +++TN+AE
Sbjct: 680 EDIDQ-VPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAE 738
Query: 347 TSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLY 406
TS+T+ I YVVD G +K+R YN + ++ V ISKA+ CYRLY
Sbjct: 739 TSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLY 798
Query: 407 TEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYS 466
+ F P +PE+ R+ + S V+Q+K + IDNI F +P SP + ++L++L +
Sbjct: 799 SSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSN 858
Query: 467 LGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS 524
LG +D + LT G Q++ PL P SKM++ + GC +I + + LSI ++VS
Sbjct: 859 LGAIDSEGVLTK-LGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVS 915
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 444 (161.4 bits), Expect = 6.7e-78, Sum P(2) = 6.7e-78
Identities = 114/272 (41%), Positives = 150/272 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA-----DGGRV 97
+K R +LPV+ I+ + + II GETGSGKTTQ+PQ+L EAG+ D +
Sbjct: 385 QKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGM 444
Query: 98 IACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM 157
+ TQPRR+A ++A R Y IRF D T K+ T +KF+TDGVLLREMM
Sbjct: 445 VGITQPRRVAAVSMAERVANELGDHGHKVG-YQIRF-DSTAKEDTKVKFMTDGVLLREMM 502
Query: 158 DDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHA 217
D LTKYS I++DEAHER+I+TDIL+G+L + R R+ L IE K + +
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLH---KENPIEHKKLKLIIMS 559
Query: 218 RKGRRG--LEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
R E L P + P +L V+ R F V IH+ +Y A IH K P
Sbjct: 560 ATLRVSDFSENKTLFP-IAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLP 618
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
PG ILVFLTGQ +I ++ L +E KKNS
Sbjct: 619 PGAILVFLTGQQEITHMVKRLRKEF-PFKKNS 649
Score = 383 (139.9 bits), Expect = 6.7e-78, Sum P(2) = 6.7e-78
Identities = 85/234 (36%), Positives = 130/234 (55%)
Query: 285 GQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNI 344
G+D+ D + E + + L +LPLYS L EQ +VF P+G R +++TN+
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNV 763
Query: 345 AETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYR 404
AETSLT+ G+ YVVDSG SK+R YN + +++ V +SKAS CYR
Sbjct: 764 AETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYR 823
Query: 405 LYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVL 464
LY+ F + PE+ R + S V+Q+K++ I NI+ F +P P A+ +A+++L
Sbjct: 824 LYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLL 883
Query: 465 YSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
LG LD+ +T G +++ PL P SKM+L S+E C I+ I + LS+
Sbjct: 884 QYLGALDNKEMITED-GKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSV 936
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 195/532 (36%), Positives = 288/532 (54%)
Query: 47 QRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRL 106
++LPVY + IL + H ++ TGSGKTTQ+P L EAG+ +GG I TQPRR+
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGG-AIGVTQPRRI 63
Query: 107 AVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYS 166
AV +V+ Y +RFED T+ + T IK +TDG+LL+EM DPLL+KYS
Sbjct: 64 AVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVE-TKIKVMTDGILLQEMKLDPLLSKYS 122
Query: 167 VIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEG 226
+IMVDEAHERS++ D +LGLLK++ + R D R++ISSATI S +F+ +
Sbjct: 123 IIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIK---- 178
Query: 227 VELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQ 286
++ V I + E + + + V V+ DK G IL+FL G+
Sbjct: 179 IDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDK---GAILIFLPGE 235
Query: 287 DDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAE 346
I I L+ E R +K L +LPLY LS+ EQEQVF+ P GKRKVVI+TNIAE
Sbjct: 236 RSIKNCITRLSHE-RWFRK----LFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAE 290
Query: 347 TSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLY 406
TS+T++ + V+DSG K YNP+S +L PIS+AS CYRLY
Sbjct: 291 TSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLY 350
Query: 407 TEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYS 466
+ + F + P + E+ R++L V+++ LGI + FD+ + P +I A + L
Sbjct: 351 SRDDFEQREPYT-LEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRL 409
Query: 467 LGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS-NELGCS-EEIITISAVLSIQSIWVS 524
LG L+DD L S G + PL P S+MI+ + S ++++ +A LS +S +
Sbjct: 410 LGALEDDRSL-SEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIF 468
Query: 525 GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+++ +A F+ GD V+FL IY+ + Q +C +++ M
Sbjct: 469 SEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIM 520
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 418 (152.2 bits), Expect = 4.7e-75, Sum P(3) = 4.7e-75
Identities = 99/251 (39%), Positives = 139/251 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR----VI 98
+ R LPV I+ + + ++ G TGSGKTTQIPQ+L EAG+ +I
Sbjct: 351 QSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMI 410
Query: 99 ACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
TQPRR+A +++ R Y IRFE NKD TA+KF+TDGVLLRE+
Sbjct: 411 GITQPRRVAAVSMSKRVAEELGDHSQKVG-YQIRFEGTVNKD-TAVKFMTDGVLLREVAQ 468
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHAR 218
D L KYS I+VDEAHERS++TDIL+G+L +I + R+++ T++ +
Sbjct: 469 DLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQ--EDPTVKPLKLVIMSATL 526
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
+ E L P +L VEGR + V +H+ + DYV+ A + H K PPG
Sbjct: 527 RIEDLTENKNLFAT-PPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGG 585
Query: 279 ILVFLTGQDDI 289
+LVFLTGQ++I
Sbjct: 586 MLVFLTGQNEI 596
Score = 367 (134.2 bits), Expect = 4.7e-75, Sum P(3) = 4.7e-75
Identities = 78/248 (31%), Positives = 142/248 (57%)
Query: 285 GQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNI 344
G ++ + ++ EEA T S + +LPLYS L EQ +VF P P G R VV++TN+
Sbjct: 653 GDENEEEEFKIEEEEAGTGP---SRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNV 709
Query: 345 AETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYR 404
AETSLT+ GI YV DSG SK+R Y+ ++ +++ V ISKAS C+R
Sbjct: 710 AETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWR 769
Query: 405 LYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVL 464
LY+ + +++ +PE+ R++L V+QLK++ + +++ F +P P ++++++ ++L
Sbjct: 770 LYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLL 829
Query: 465 YSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS 524
+ + ++ ++T G+ ++ PL P S+++L ++ C +T+ A LS I++
Sbjct: 830 KYISAVSEEGRVTQ-VGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIFIP 888
Query: 525 GRGAQKEL 532
A +L
Sbjct: 889 ENQAIPQL 896
Score = 54 (24.1 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 406 YTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNI--LGFDWPASPPPEAMIRALEV 463
+ E +FV+ + + E Q+ L ++QL I + + F P E ++AL+
Sbjct: 957 WCESHFVR---FKVLKEAQK--LRQQIVQLLKTNIPSFANINFQDKLDAPTEKQVKALKQ 1011
Query: 464 LYSLGVLDD-----DAKLTSPTGFQ----VAEIPLEPMISKMILSSNELGCSEEIITI 512
+ + G +D D T PT F+ ++P P+ S +++ E+++ I
Sbjct: 1012 MVAAGFIDRVAIRADKAPTPPTQFRPPRRAIDVPYIPL-SPLVVDGGSSDDEEKLVYI 1068
Score = 39 (18.8 bits), Expect = 4.7e-75, Sum P(3) = 4.7e-75
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
F + D + L + F + WC +F+ + +
Sbjct: 932 FLDDKSDAIKMLQVLGEFAHE-PTEKWCESHFVRFKVL 968
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 416 (151.5 bits), Expect = 7.5e-74, Sum P(2) = 7.5e-74
Identities = 114/287 (39%), Positives = 159/287 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD------GGR 96
++QR LPV+ I+ V H I+ GETGSGKTTQ+PQ+L EAG+ + G
Sbjct: 437 QQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG- 495
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDL-----TAIKFLTDGV 151
+I TQPRR+A ++A R Y IRF D T K+ TA+KF+TDGV
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELGDHGHRVG-YQIRF-DTTIKNEGKENGTALKFMTDGV 553
Query: 152 LLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCR-----------SDLRLI 200
LLREMM D LL KYS I++DEAHER+I+TDIL+G+L ++ + R L+LI
Sbjct: 554 LLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLI 613
Query: 201 ISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYV 260
I SAT+ S E L + P I++V+ R + V IH+ ++ DY+
Sbjct: 614 IMSATLRVSDFS------------ENPALF-KTPPPIINVQARQYPVSIHFNKKTNYDYL 660
Query: 261 QAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
+ A IH K P G IL+FLTGQ++I ++ L +E KK++
Sbjct: 661 EEAFKKTCKIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPFKKKST 707
Score = 373 (136.4 bits), Expect = 7.5e-74, Sum P(2) = 7.5e-74
Identities = 87/244 (35%), Positives = 132/244 (54%)
Query: 298 EEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
EE+ SK++ G L +LPLYS L +Q +VF P G R +++TN+AETSLT+ GI Y
Sbjct: 758 EESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRY 817
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD G SK+R YN + +++ V +SKAS CYRLY+ F P
Sbjct: 818 VVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFP 877
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+ R S V+ +K++GID I F +P P ++ +A E+L LG LD + K
Sbjct: 878 QFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQ 937
Query: 477 TSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKEL-DEA 535
+ G +++ PL P +K+++ N+ C II I + LS+ ++ + DEA
Sbjct: 938 ITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEA 997
Query: 536 KLRF 539
+ F
Sbjct: 998 RREF 1001
Score = 37 (18.1 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 287 DDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG---KRKVVISTN 343
D + L++ E + + K S +I +P Y + E P + + S+
Sbjct: 1106 DQVAIRGDLISSEVKVANKTS--IINIP-YCPVMPIEDGPFVYLHPNSLIAESGQIPSSY 1162
Query: 344 IAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKAS 386
+ SL+ +G + + K R NP+ DI +A I+K S
Sbjct: 1163 LVYQSLSTKG--NISEDETKKVRM-NPLVDISGKQLANIAKNS 1202
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 419 (152.6 bits), Expect = 5.8e-73, Sum P(2) = 5.8e-73
Identities = 105/271 (38%), Positives = 151/271 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R +LP+ I+ + + +I GETGSGKTTQ+PQ+L EAG+ +I T+
Sbjct: 236 QEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGITE 295
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +++ R Y IR+E T D T IKF+TDGVLL+E+ D LL
Sbjct: 296 PRRVAAVSMSQRVAKEMNLSHRVVS-YQIRYEGNTT-DETQIKFMTDGVLLKEVQKDFLL 353
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
+KY VI++DEAHERS+ TDIL+GLL +I R L+LII SAT+ + +
Sbjct: 354 SKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFT------ 407
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ R G P +L V+ R F V +H+ ++ P+ DY V IH P G
Sbjct: 408 ENTRLFAGT-------PPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSG 460
Query: 278 DILVFLTGQDDIDATIQLLTEEARTSKKNSS 308
ILVFLTGQ ++ + + L +A +KNS+
Sbjct: 461 GILVFLTGQAEVHSLCRRL-RKAFPFQKNST 490
Score = 360 (131.8 bits), Expect = 5.8e-73, Sum P(2) = 5.8e-73
Identities = 97/289 (33%), Positives = 150/289 (51%)
Query: 287 DDI---DATIQLLTEEARTSKKNSSGL--IILPLYSGLSRAEQEQVFSPTPRGKRKVVIS 341
DDI D + L ++ +K+ S L +LPLYS L+ +Q +VF P P G R V++
Sbjct: 549 DDIAGSDVDLDLGDGDSEEEEKSDSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVA 608
Query: 342 TNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXK 401
TN+AETSLT+ GI YVVD G K+RFY+ I+ + + V IS+AS
Sbjct: 609 TNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGH 668
Query: 402 CYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRAL 461
CYRLY+ F+ + PE+ + + ++Q+KAL I+ ++ F +P PP EA+ A
Sbjct: 669 CYRLYSSAVFM-DFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAE 727
Query: 462 EVLYSLGVLDDD-----------AKLT---SPTGFQVAEIPLEPMISKMILSSNELGCSE 507
E+L +LG L + AKL+ SP G +A P+ P +KM+ S + C
Sbjct: 728 ELLIALGALKEPPMTGRLKEQQAAKLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLP 787
Query: 508 EIITISAVLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKG 555
ITI + ++++ ++ R A E + KL+ +G V I+ G
Sbjct: 788 YTITIVSAMTVRELFEEFDRPAASEEETVKLK--GKKGRLVQMQRIWAG 834
Score = 41 (19.5 bits), Expect = 9.8e-30, Sum P(2) = 9.8e-30
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 162 LTKYSVIMVDEAHE-RSISTD 181
L Y+V+ VDE E R TD
Sbjct: 528 LDNYAVVPVDEGDEDRDAETD 548
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 429 (156.1 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 111/296 (37%), Positives = 162/296 (54%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++ R RLPV I+ V+ H ++ GETGSGKTTQ+PQ+L EAG+A G +I T+
Sbjct: 246 QEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTE 305
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +++ R Y IR+E ++ T IK +TDGVLL+E+ D LL
Sbjct: 306 PRRVAAISMSHRVATEMNLSSGVVS-YQIRYEGNVTEN-TKIKVMTDGVLLKEIQRDFLL 363
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
KYSVI++DEAHERS+ TDIL+GLL +I R+ ++LII SAT+ + +
Sbjct: 364 QKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFT------ 417
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ +R P P ++ VE R F V +H+ + P+ DY + IH PPG
Sbjct: 418 ENKRLFSS----P---PPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPG 470
Query: 278 DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS---RAEQEQVFSP 330
ILVFLTGQ ++ + + L +A K N ++ L RA+++ V P
Sbjct: 471 GILVFLTGQAEVHSVCRRL-RKAFPYKPNREHTDMMETEEDLKKSKRAKKKNVSLP 525
Score = 347 (127.2 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 86/243 (35%), Positives = 131/243 (53%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L +LPLYS L+ +Q +VF P P G R V++TN+AETSLT+ GI YVVD G K+RFY+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLV 429
++ + + V IS+AS CYRLY+ F + E+ R +
Sbjct: 640 RVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVF-GDFSLFSEAEITRRPVE 698
Query: 430 SCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLD-----------DDAKLT- 477
V+Q+K L I+ ++ F +P P EA+I A E+L SLG L+ + A+L+
Sbjct: 699 DLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSC 758
Query: 478 --SPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS-GRGAQKELDE 534
SP G +A P+ P +KM+ + GC + IITI + ++++ I+ R A E +
Sbjct: 759 PISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRPAGSEEEN 818
Query: 535 AKL 537
K+
Sbjct: 819 VKM 821
Score = 37 (18.1 bits), Expect = 4.9e-40, Sum P(2) = 4.9e-40
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 424 QRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK 475
Q +N V+ V + +DN + +PP EA + L + G+ D A+
Sbjct: 886 QLTNAVNAVCADADVYVDNKM------APPTEAQVLCLRQIVLAGLGDHIAR 931
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 740 (265.6 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 183/543 (33%), Positives = 291/543 (53%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 156 QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 211
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR++ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQIQREPSL 270
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F
Sbjct: 271 PQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFS------ 324
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPP---GD 278
V++ RL P + + + E+ +++ S I K PP GD
Sbjct: 325 NAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLES----IDHKYPPEERGD 380
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
+LVFL+G +I A + E A+T ++ ++LPL+S LS A+Q++VF P G RK
Sbjct: 381 LLVFLSGMAEISAVL----EAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC 436
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
++STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+AS
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
C+RLY E + P +PE++R L S V+Q+K++ + + F + PPP ++
Sbjct: 497 PGVCFRLYAESDYDAFAPYP-VPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLE 555
Query: 459 RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
A+ L G LD LT P G +A++P++ +I KM++ + E ++TI+A LS+
Sbjct: 556 TAILYLRDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV 614
Query: 519 QSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFINY 573
QS + + E A+ + +GD T N++ ++Q S S WC + I
Sbjct: 615 QSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEE 674
Query: 574 HAM 576
H +
Sbjct: 675 HRL 677
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 738 (264.8 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 185/545 (33%), Positives = 296/545 (54%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 158 QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 213
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR++ +P L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQIQREPSL 272
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF-HARKGR 221
+Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F HA
Sbjct: 273 PQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPV-- 330
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP---GD 278
V++ RL P + + + + Q E + + + + I +K PP GD
Sbjct: 331 -----VQVPGRLFPITVVYQPQEAD-QTASKSEKLDP--RPFLRVLEAIDNKYPPEERGD 382
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
+LVFL+G +I + A +++ ++LPL+S LS ++Q++VF P G RK
Sbjct: 383 LLVFLSGMAEITTVLDAAQAYASLTQR----WVVLPLHSALSVSDQDKVFDVAPAGVRKC 438
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
++STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+AS
Sbjct: 439 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 498
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
CYRLY E + P +PE++R L + V+Q+K++ + + F + PPP ++
Sbjct: 499 PGVCYRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVE 557
Query: 459 RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
A+ L G LD LT P G +A++P++ +I KM++ + +E ++TI+A LS+
Sbjct: 558 TAILYLQEQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV 616
Query: 519 QSIWVSGRGAQKELDEAKLR--FAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFI 571
QS + R AQ LD A R + +GD T N++ ++Q S S WC + +
Sbjct: 617 QSPFT--RSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGV 674
Query: 572 NYHAM 576
H +
Sbjct: 675 EEHRL 679
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 190/530 (35%), Positives = 288/530 (54%)
Query: 43 EK-QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACT 101
EK R +LP+ ++Y + + T I++GETGSGK+TQ+PQ AG A+ G IA T
Sbjct: 154 EKFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGS-IAVT 212
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A ++ASR Y +RFE+ T T I+++TDG++LR+ + PL
Sbjct: 213 QPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHK-TKIEYMTDGIVLRKALVSPL 271
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHA 217
L KYS +++DEAHERS+ +D+L+ +L++ Q R + LRLII SAT++A+ ++F+
Sbjct: 272 LDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNN 331
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVS------DYVQAAVSTVLLIH 271
K ++ V GR F +++ +V ++ DYV AV V +H
Sbjct: 332 AK-----------------VVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVH 374
Query: 272 DKEPPG-DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSP 330
EP G DILVFLTG ++I+A L E + ++ L+ +PLY+ L +Q++ F
Sbjct: 375 LTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRK 434
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXX 390
TP+G RKV+ISTNIAETS+T+ GI V+DSG K + + + I+ L V +SKA
Sbjct: 435 TPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQR 494
Query: 391 XXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
KCYRLY+ E F K AE +PE+ R NL + ++L LG+ N
Sbjct: 495 AGRAGRDAPGKCYRLYSREDFHK-FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLID 553
Query: 451 SPPPEAMIRALEVLYSLGVL----DDDAKLT-SPTGFQVAEIPLEPMISKMILSSNELGC 505
P + + AL L SLG + D +K + G PL P ++++ + + GC
Sbjct: 554 PPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGC 613
Query: 506 SEEIITISAVLSIQSIWVSGRGAQK---ELDEAKLRFAAAEGDHVTFLNI 552
E I I A + +++ SG G K ++D + RF EGDH+T L +
Sbjct: 614 IMEAIKIVAAMQTDALF-SGAGDSKSDADVDRIRRRFETREGDHITLLKL 662
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 732 (262.7 bits), Expect = 8.8e-72, P = 8.8e-72
Identities = 185/544 (34%), Positives = 288/544 (52%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+ +R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 155 QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 210
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR++ +P L
Sbjct: 211 PRRIACISLAKRVSFESLSQYGSQVGYQIRFES-TRTAATKIVFLTVGLLLRQIQREPSL 269
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F
Sbjct: 270 PQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF------- 322
Query: 223 GLEGVELVP-RLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVL-LIHDKEPP---G 277
G V VP RL P + + + + V VL I +K PP G
Sbjct: 323 GTAPVVQVPGRLFPITVVYQPQ----EAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERG 378
Query: 278 DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
D+LVFL+G +I + + E A+T + ++LPL+S LS A+Q++VF P G RK
Sbjct: 379 DLLVFLSGMAEISSVL----EAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 434
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
++STNIAETS+T++GI +VVDSG K+ Y+P + + L IS+AS
Sbjct: 435 CILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 494
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
C+RLY E + P +PE++R L + V+Q+K++ + + F + PPP ++
Sbjct: 495 GPGVCFRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASL 553
Query: 458 IRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLS 517
A+ L G LD LT P G +A++P++ +I KM++ + +E ++TI+A LS
Sbjct: 554 ETAILYLQDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 612
Query: 518 IQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFIN 572
+QS + + E A+ + +GD T N++ ++Q S S WC I
Sbjct: 613 VQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIE 672
Query: 573 YHAM 576
H +
Sbjct: 673 EHRL 676
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 732 (262.7 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 185/544 (34%), Positives = 288/544 (52%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+ +R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 160 QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 215
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR++ +P L
Sbjct: 216 PRRIACISLAKRVSFESLSQYGSQVGYQIRFES-TRTAATKIVFLTVGLLLRQIQREPSL 274
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F
Sbjct: 275 PQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF------- 327
Query: 223 GLEGVELVP-RLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVL-LIHDKEPP---G 277
G V VP RL P + + + + V VL I +K PP G
Sbjct: 328 GTAPVVQVPGRLFPITVVYQPQ----EAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERG 383
Query: 278 DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
D+LVFL+G +I + + E A+T + ++LPL+S LS A+Q++VF P G RK
Sbjct: 384 DLLVFLSGMAEISSVL----EAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 439
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
++STNIAETS+T++GI +VVDSG K+ Y+P + + L IS+AS
Sbjct: 440 CILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 499
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM 457
C+RLY E + P +PE++R L + V+Q+K++ + + F + PPP ++
Sbjct: 500 GPGVCFRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASL 558
Query: 458 IRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLS 517
A+ L G LD LT P G +A++P++ +I KM++ + +E ++TI+A LS
Sbjct: 559 ETAILYLQDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 617
Query: 518 IQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFIN 572
+QS + + E A+ + +GD T N++ ++Q S S WC I
Sbjct: 618 VQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIE 677
Query: 573 YHAM 576
H +
Sbjct: 678 EHRL 681
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 731 (262.4 bits), Expect = 1.2e-71, P = 1.2e-71
Identities = 188/543 (34%), Positives = 297/543 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
++++ LP+++YR I+ LV TH ++ G+TG GK+TQ+PQYL A G IACTQP
Sbjct: 157 REQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLL----ASGINNIACTQP 212
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDL-TAIKFLTDGVLLREMMDDPLL 162
RR+A ++A R Y IRFE T++ L T + FLT+G+LLR++ D L
Sbjct: 213 RRIACISLAKRVSFESLNQYGSKVGYQIRFE--TSRTLATKLLFLTEGLLLRQIQQDASL 270
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+ + R DLRL++ SATI K S++F+
Sbjct: 271 GQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFN------ 324
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVST-------VLLIHDKEP 275
+ +L V GR F +Q+ Y P + V + VL D+
Sbjct: 325 -----------DAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRY 373
Query: 276 P----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPT 331
P GD+L+FL+G +I +TIQ E +T ++ I+LPL+S LS A+Q++VF
Sbjct: 374 PQEERGDLLLFLSGVAEI-STIQ---EACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIA 429
Query: 332 PRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXX 391
P G RK +ISTNIAETS+T++G+ +VVDSG K+ ++P + ++ L IS+AS
Sbjct: 430 PPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRK 489
Query: 392 XXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 451
CYRLY+E + P +PE+ R L S ++Q+K++G+ + F +
Sbjct: 490 GRAGRTGPGVCYRLYSESDYDAFAPYP-VPEIHRVALDSLILQMKSMGLGDPRTFTF-ID 547
Query: 452 PPPEAMIR-ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
PPP + I+ A+ L G LD+ +LTS G +A++P++ +I KM++ + E ++
Sbjct: 548 PPPASSIQTAVTYLREQGALDEHGELTS-IGRLLAQLPVDVVIGKMLVLGSVFNLVEPVL 606
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHW 565
T++A LS+QS ++ + A+ + GD T +N + ++Q S W
Sbjct: 607 TVAAALSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKW 666
Query: 566 CHK 568
C +
Sbjct: 667 CRR 669
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 730 (262.0 bits), Expect = 1.5e-71, P = 1.5e-71
Identities = 185/542 (34%), Positives = 293/542 (54%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R LP+ +YR IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 156 QRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 211
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR + +P L
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRHVQREPTL 270
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+++ R DL++I+ SAT+ SA+F G+
Sbjct: 271 PQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYF----GQA 326
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP---GDI 279
+ V++ RL P + + + +E+ D + + + I K PP GD+
Sbjct: 327 PV--VQVPGRLFPITVVYQPQEAEPTASTLEK--LD-PRPFIRVLEAIDSKYPPEERGDL 381
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LVFL+G +I A + E A+ + S ++LPL+S LS A Q++VF P G RK +
Sbjct: 382 LVFLSGLAEIGAVL----EAAQAHARRSGRWVVLPLHSTLSVAAQDKVFDVAPPGVRKCI 437
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
+STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+AS
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
C+RLY E + P +PE++R L + V+Q+K++ + + F + PP ++
Sbjct: 498 GVCFRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLET 556
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
A+ L G LD LT P G +A++P++ +I KM++ + L +E ++TI+A LS+Q
Sbjct: 557 AILYLRDQGALDGSEALT-PIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQ 615
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFINYH 574
S + R + A + GD T N++ ++Q S KS WC + I H
Sbjct: 616 SPFT--RSTRSNPKCAWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEH 673
Query: 575 AM 576
+
Sbjct: 674 RL 675
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 425 (154.7 bits), Expect = 5.7e-71, Sum P(2) = 5.7e-71
Identities = 103/259 (39%), Positives = 148/259 (57%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R +LP+ AI+ V H I+ GETGSGKTTQ+PQ+L EAG++ +I T+
Sbjct: 242 QEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTE 301
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IR+E ++ T IKF+TDGVLL+E+ D LL
Sbjct: 302 PRRVAAVAMSQRVAKEMNLSHRVVS-YQIRYEGNVTEE-TRIKFMTDGVLLKEIQKDFLL 359
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
KY V+++DEAHERS+ TDILLGLL +I R+ L+L+I SAT+ + +
Sbjct: 360 LKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFT------ 413
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ +R + P P ++ VE R F V +H+ + P+ DY V IH P G
Sbjct: 414 QNQR----LFTTP---PPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAG 466
Query: 278 DILVFLTGQDDIDATIQLL 296
ILVFLTGQ ++ A + L
Sbjct: 467 GILVFLTGQAEVHALCRRL 485
Score = 335 (123.0 bits), Expect = 5.7e-71, Sum P(2) = 5.7e-71
Identities = 89/268 (33%), Positives = 139/268 (51%)
Query: 290 DATIQLLTEEARTSKKNSSGLI--ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAET 347
D + L EA ++ + L +LPLYS L+ +Q QVF P P G R VI+TN+AET
Sbjct: 559 DLDLDLGDSEANEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAET 618
Query: 348 SLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYT 407
SLT+ GI YVVD G K+R+Y+ ++ + + V +S+AS CYRLY+
Sbjct: 619 SLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS 678
Query: 408 EEYF--VKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLY 465
F ++ P PE+ R + ++Q+KAL I+ ++ F +P P EA+I A E+L
Sbjct: 679 SAVFGDFEQFPP---PEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLI 735
Query: 466 SLGVLDDDAK-----------LTSPT---GFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
+LG L K L+ P G ++ P+ P +KM+ S + GC I
Sbjct: 736 ALGALQAPPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIA 795
Query: 512 ISAVLSIQSIWVS-GRGAQKELDEAKLR 538
I A ++++ ++ R A E + A+L+
Sbjct: 796 IVAAMTVRELFEELDRPAASEEELAELK 823
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 724 (259.9 bits), Expect = 6.9e-71, P = 6.9e-71
Identities = 180/542 (33%), Positives = 292/542 (53%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R LP+ +Y IL +++ H ++ G+TG GK+TQ+PQYL AG + +ACTQ
Sbjct: 156 QRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH----VACTQ 211
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR+M +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQMQREPSL 270
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y V++VDE HER + D LLG+L+++ R DL++++ SATI S++F G
Sbjct: 271 PQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYF----GNA 326
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP---GDI 279
+ V++ RL P + + + E+ D + + + I +K PP GD+
Sbjct: 327 PV--VQVPGRLFPITVVYQPQEAEPTTSKSEK--LD-PRPFLRVLEAIDNKYPPEERGDL 381
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LVFL+G +I A + E A+ ++ ++LPL+S LS A+Q++VF P G RK +
Sbjct: 382 LVFLSGMAEISAVL----EPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCI 437
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
+STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+AS
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
C+RLY E + P +PE++R L + V+Q+K++ + + F + PPP ++
Sbjct: 498 GVCFRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLET 556
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
A+ L G LD LT P G +A++P++ +I KM++ + +E ++TI+A LS+Q
Sbjct: 557 AILYLRDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQ 615
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSSHWCHKNFINYH 574
+ + + E + + +GD T LN++ ++Q S WC I H
Sbjct: 616 TPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEH 675
Query: 575 AM 576
+
Sbjct: 676 RL 677
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 620 (223.3 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 159/462 (34%), Positives = 248/462 (53%)
Query: 129 YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLK 188
Y++RF+ K T IKFLT+G+LL+E++ DP L +YS ++VDE HER I D+L G LK
Sbjct: 227 YSVRFDHNVPKG-TKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLK 285
Query: 189 KIQ-------RCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVE 241
++ R L+++ SAT +++ FF + R + E + E L +E
Sbjct: 286 QMLLSPDKPGRGGLPLKVVAMSATANIETLENFFSIPQDDRKAKA-ESDGKAEQT-LKIE 343
Query: 242 GRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGDILVFLTGQDDIDATIQLLTEEA 300
GR F V+I + +PV V TV IH EP PGDILVFL GQ+ I+ +L+ E A
Sbjct: 344 GRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYA 403
Query: 301 RTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS 360
T + + LPL+ LS Q F P RKVV++TNIAETS+T+ G+ YV+D+
Sbjct: 404 ATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDT 463
Query: 361 GFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGI 420
G SK + Y +E+L+V ISK+S KCYRLYTE+ + KE+ +
Sbjct: 464 GKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVY-KEMRDADL 522
Query: 421 PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT 480
PE+ R+N+ + + A G+D++L F +P M +A+ L LG +DD+ +T
Sbjct: 523 PEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITE-L 581
Query: 481 GFQVAEIPLEPMISKMILS--SNELGCSEEIITI-SAVLSIQSIW--VSGRGAQKELDEA 535
G ++A +P+ + +++L+ S C E+I I S + I+ + A++E++E
Sbjct: 582 GKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEEY 641
Query: 536 KLRFAAAEGDHVTFLNIYKGFL-QSCKSSHWCHKNFINYHAM 576
+ EGD + +L + + ++ + WC K IN M
Sbjct: 642 RRELRRREGDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTM 683
Score = 172 (65.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 42/109 (38%), Positives = 59/109 (54%)
Query: 95 GRVIACTQPRRLAVQAVASRXXXXXXX-------------XXXXXXXYTIRFEDFTNKDL 141
G +IA TQPRR+A +A R Y++RF+ K
Sbjct: 180 GGMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKG- 238
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKI 190
T IKFLT+G+LL+E++ DP L +YS ++VDE HER I D+L G LK++
Sbjct: 239 TKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQM 287
Score = 114 (45.2 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVI 98
R+ LP+++++ AI + + I+VGETGSGK+TQ+PQ+L + W +VI
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVI 166
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 425 (154.7 bits), Expect = 4.0e-70, Sum P(2) = 4.0e-70
Identities = 101/259 (38%), Positives = 148/259 (57%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R +LP+ I+ V H I+ GETGSGKTTQ+PQ+L EAG++ +I T+
Sbjct: 240 QEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITE 299
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IR+E ++ T IKF+TDGVLL+E+ D LL
Sbjct: 300 PRRVAAVAMSQRVAKEMNLSQRVVS-YQIRYEGNVTEE-TRIKFMTDGVLLKEIQKDFLL 357
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
+Y V+++DEAHERS+ TDIL+GLL +I R+ L+L+I SAT+ + +
Sbjct: 358 LRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFT------ 411
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ +R L P+ P ++ VE R F V +H+ + P+ DY V IH P G
Sbjct: 412 QNQR------LFPQ-PPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAG 464
Query: 278 DILVFLTGQDDIDATIQLL 296
ILVFLTGQ ++ A + L
Sbjct: 465 GILVFLTGQAEVHALCRRL 483
Score = 327 (120.2 bits), Expect = 4.0e-70, Sum P(2) = 4.0e-70
Identities = 81/229 (35%), Positives = 122/229 (53%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L +LPLYS L+ +Q QVF P P G R V++TN+AETSLT+ GI YVVD G K+R Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYF--VKEIPAEGIPEMQRSN 427
++ + + V +S+AS CYRLY+ F ++ P PE+ R
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPP---PEITRRP 698
Query: 428 LVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS--------- 478
+ ++Q+KAL I+ ++ F +P P EA+I A E+L +LG L K S
Sbjct: 699 VEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWL 758
Query: 479 --PT---GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIW 522
P G +A P+ P +KM+ S + GC ITI A ++++ ++
Sbjct: 759 GCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 807
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 462 (167.7 bits), Expect = 4.2e-70, Sum P(2) = 4.2e-70
Identities = 106/260 (40%), Positives = 152/260 (58%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+K R LP++ I+ + + T++ GETGSGKTTQIPQ+L EAG+A G +I T+
Sbjct: 230 QKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITE 289
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A+A R Y IR+E T + T I F+TDGVL++EM D +L
Sbjct: 290 PRRVAAIAMAQRVGVELAKPDEVS--YQIRYEG-TRSETTNILFMTDGVLMKEMEQDVML 346
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
KYSVI++DEAHERS+ +D+L+G+L +I RS LRL+I SAT+ + F H +
Sbjct: 347 KKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLR---LDDFTHKK 403
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
L P L P ++ V+ R F V +H+ + DY+ +A IH+ PPG
Sbjct: 404 ----------LFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGA 453
Query: 279 ILVFLTGQDDIDATIQLLTE 298
ILVF+TGQ ++ QL+T+
Sbjct: 454 ILVFVTGQHEVK---QLITK 470
Score = 289 (106.8 bits), Expect = 4.2e-70, Sum P(2) = 4.2e-70
Identities = 71/217 (32%), Positives = 112/217 (51%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L LPLYS LS +Q +VF TP G R VISTN+AETSLT+ G+ YV+D GF K+R Y+
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLV 429
I+ + V IS+AS YRLY+ + ++ PE+
Sbjct: 635 SITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPAD 693
Query: 430 SCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDD-------DAKLTSPTGF 482
V+ LK++ I ++ F +P++P + + A + L LG L + +A++T G
Sbjct: 694 QLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITK-LGK 752
Query: 483 QVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
+A PL P +K I +++ I + ++LS++
Sbjct: 753 TLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVR 789
Score = 38 (18.4 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 490 EPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTF 549
EP+I L + ++E++ VL + W S GA++ D L AA+ + + +
Sbjct: 790 EPLIPVSSLRGDTPEETKELM--KNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKY 847
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 418 (152.2 bits), Expect = 8.7e-70, Sum P(2) = 8.7e-70
Identities = 102/259 (39%), Positives = 144/259 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R +LP+ I+ V H II GETGSGKTTQ+PQ+L EAG++ VI T+
Sbjct: 244 QEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTE 303
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IR+E ++ T IKF+TDGVLL+E+ D LL
Sbjct: 304 PRRVAAVAMSQRVAKEMNLSPRVVS-YQIRYEGNVTEE-TRIKFMTDGVLLKEIQKDFLL 361
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
KY V+++DEAHERS+ TDIL+GLL +I R L+L+I SAT+ + +
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFT------ 415
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ L + P ++ VE R F V +H+ + P+ DY V IH P G
Sbjct: 416 ------QNQRLFTQ-PPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAG 468
Query: 278 DILVFLTGQDDIDATIQLL 296
ILVFLTGQ ++ A + L
Sbjct: 469 GILVFLTGQAEVHALCRRL 487
Score = 331 (121.6 bits), Expect = 8.7e-70, Sum P(2) = 8.7e-70
Identities = 84/244 (34%), Positives = 129/244 (52%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L +LPLYS L+ +Q QVF P P G R V++TN+AETSLT+ GI YVVD G K+R Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLV 429
++ + + V +S+AS CYRLY+ F + PE+ R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEKYPPPEITRRPVE 704
Query: 430 SCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK-----------LTS 478
++Q+KAL I+ ++ F +P P EA+I A E+L +LG L K L+
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 479 PT---GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS-GRGAQKELDE 534
P G +A P+ P +KM+ S + GC ITI A ++++ ++ R A + +
Sbjct: 765 PITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELFEELDRPAASDEEL 824
Query: 535 AKLR 538
A+L+
Sbjct: 825 ARLK 828
Score = 42 (19.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 18/83 (21%), Positives = 31/83 (37%)
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
+L K S + V EA R T LG +++ + + + + S+S R+
Sbjct: 96 MLQKLSEVQVSEAEMRLFYTTSKLGTGERMYHTNEKPDDVAAQGSEKISSLSGAHRKRRR 155
Query: 221 RRGLEGVELVPRLEPAILSVEGR 243
+ E E EP + R
Sbjct: 156 QEAEEESESSVDSEPEEAPTDNR 178
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 394 (143.8 bits), Expect = 8.7e-70, Sum P(2) = 8.7e-70
Identities = 90/261 (34%), Positives = 147/261 (56%)
Query: 323 EQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPI 382
+Q ++F P P G RK VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PI
Sbjct: 278 QQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPI 337
Query: 383 SKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN 442
SK+ KC+R+Y+++++ + +P IPE++R++L S V+ LK L I +
Sbjct: 338 SKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD 397
Query: 443 ILGFDWPASPPPEAMI-RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSN 501
++ F + PP E +I AL+ LY +D +T G + E PL P ++ ++ +
Sbjct: 398 VIRFPY-LDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAA 455
Query: 502 ELGCSEEIITISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
L C + ++ I+A+LS++++++ QKE ++ AA G F + F Q
Sbjct: 456 SLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ- 514
Query: 560 CKSS----HWCHKNFINYHAM 576
CKSS WC K++I++ +
Sbjct: 515 CKSSGAPASWCQKHWIHWRCL 535
Score = 355 (130.0 bits), Expect = 8.7e-70, Sum P(2) = 8.7e-70
Identities = 99/273 (36%), Positives = 150/273 (54%)
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
+I TQPR++A +VA R Y +RF+D ++K+ TAIK++TDG LL+ +
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHI 59
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD-----LRLIISSATIEAKSM 211
+ DP LTK+SVI++DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +
Sbjct: 60 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL 119
Query: 212 SAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH 271
SAFF G + ++ RL P V + N+ I + + Y+QA V + IH
Sbjct: 120 SAFF----GNCPI--FDIPGRLYP----VREKFCNL-IGPRDRENTAYIQAIVKVTMDIH 168
Query: 272 DKEPPGDILVFLTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQ 324
E GDILVFLTGQ +I+ + +LL + A + GL+ILP Y ++ Q
Sbjct: 169 LNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTVSQ 228
Query: 325 EQVFSPTPRGKRKVVISTNIAETSLTLEGIVYV 357
+ T K + + T LT+ GI V
Sbjct: 229 TSLTFVTHIQIMKQISENQHSLTGLTIAGITGV 261
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 415 (151.1 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 99/259 (38%), Positives = 145/259 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R +LP+ I+ V H I+ GETGSGKTTQ+PQ+L EAG++ +I T+
Sbjct: 33 QEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTE 92
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IR+E ++ T IKF+TDGVLL+E+ D LL
Sbjct: 93 PRRVAAVAMSQRVAKEMNLSQRVVS-YQIRYEGNVTEE-TRIKFMTDGVLLKEIQKDFLL 150
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
+Y V+++DEAHERS+ TDIL+GLL +I R+ L+L+I SAT+ + +
Sbjct: 151 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFT------ 204
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ L + P ++ VE R F V +H+ + P+ DY V IH P G
Sbjct: 205 ------QNPRLFAK-PPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAG 257
Query: 278 DILVFLTGQDDIDATIQLL 296
ILVFLTGQ ++ A + L
Sbjct: 258 GILVFLTGQAEVHALCRRL 276
Score = 329 (120.9 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 79/229 (34%), Positives = 124/229 (54%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L +LPLYS L+ +Q QVF P P G R V++TN+AETSLT+ GI YVVD G K+R+Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYF--VKEIPAEGIPEMQRSN 427
++ + + V +S+AS CYRLY+ F ++ P PE+ R
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP---PEITRRP 491
Query: 428 LVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK-----------L 476
+ ++Q+KAL ++ ++ F +P P EA++ A E+L +LG L K L
Sbjct: 492 VEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRL 551
Query: 477 TSPT---GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIW 522
+ P G +A P+ P +KM+ S + GC ITI A ++++ ++
Sbjct: 552 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 430 (156.4 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 105/258 (40%), Positives = 146/258 (56%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+ R RLP+ ++ + + I+ GETGSGKTTQ+PQ+L EAG+A ++I T+
Sbjct: 254 QNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQH-KMIGVTE 312
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IRFE T IKF+TDGVLL+E+ D LL
Sbjct: 313 PRRVAAIAMSKRVAHEMNLPESEVS-YLIRFEGNVTP-ATRIKFMTDGVLLKEIETDFLL 370
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCR----SDLRLIISSATIEAKSMSAFFHAR 218
+KYSVI++DEAHERS+ TDIL+GLL +I R L+LII SAT+ +
Sbjct: 371 SKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFT------ 424
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
E L ++ P +L VE R F V IH+ + DYV A L IH+K P G
Sbjct: 425 ------ENTRLF-KIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGG 477
Query: 279 ILVFLTGQDDIDATIQLL 296
IL+F+TGQ +++ ++ L
Sbjct: 478 ILIFVTGQQEVNQLVRKL 495
Score = 315 (115.9 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 87/288 (30%), Positives = 138/288 (47%)
Query: 256 VSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPL 315
+ DY T +H++ D L ++D D + L E S + L +LPL
Sbjct: 566 LDDYKLPGDDTEADMHEQPDEDDEQEGL--EEDNDDELGLEDESGMGSGQRQP-LWVLPL 622
Query: 316 YSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIE 375
YS LS +Q ++F P P G R V+STN+AETSLT+ I YVVD G K R Y+ ++ +
Sbjct: 623 YSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVS 682
Query: 376 NLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQL 435
VV SKAS CYRLY+ + P++Q+ + ++Q+
Sbjct: 683 AFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQM 742
Query: 436 KALGIDNILGFDWPASPPPEAMIRALEV-LYSLGVLD-------DDAKLTSPTGFQVAEI 487
+ +GID ++ F +P SPP + ++A E L LG L+ D + G ++
Sbjct: 743 RCMGIDRVVHFPFP-SPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRF 801
Query: 488 PLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEA 535
P+ P KM+ S++ + + A LS+Q + + G Q++ D A
Sbjct: 802 PVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIE-TGVQRDEDVA 848
Score = 45 (20.9 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 417 AEGIPEMQRSNLVSCVIQLKA---LGIDNI-LGFDWPASPPPEAMIRALEVLYSLGVLDD 472
A G+ + S + +QL L + ++ LG D PP +A R L + G+ D
Sbjct: 898 ANGLRQKAMSEVRKLRVQLTNEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDR 957
Query: 473 DAK 475
A+
Sbjct: 958 VAR 960
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 415 (151.1 bits), Expect = 3.0e-69, Sum P(2) = 3.0e-69
Identities = 99/259 (38%), Positives = 145/259 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R +LP+ I+ V H I+ GETGSGKTTQ+PQ+L EAG++ +I T+
Sbjct: 246 QEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTE 305
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A A++ R Y IR+E ++ T IKF+TDGVLL+E+ D LL
Sbjct: 306 PRRVAAVAMSQRVAKEMNLSQRVVS-YQIRYEGNVTEE-TRIKFMTDGVLLKEIQKDFLL 363
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----LRLIISSATIEAKSMSAFFHAR 218
+Y V+++DEAHERS+ TDIL+GLL +I R+ L+L+I SAT+ + +
Sbjct: 364 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFT------ 417
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE-PVSDYVQAAVSTVLLIHDKEPPG 277
+ L + P ++ VE R F V +H+ + P+ DY V IH P G
Sbjct: 418 ------QNPRLFAK-PPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAG 470
Query: 278 DILVFLTGQDDIDATIQLL 296
ILVFLTGQ ++ A + L
Sbjct: 471 GILVFLTGQAEVHALCRRL 489
Score = 329 (120.9 bits), Expect = 3.0e-69, Sum P(2) = 3.0e-69
Identities = 79/229 (34%), Positives = 124/229 (54%)
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L +LPLYS L+ +Q QVF P P G R V++TN+AETSLT+ GI YVVD G K+R+Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYF--VKEIPAEGIPEMQRSN 427
++ + + V +S+AS CYRLY+ F ++ P PE+ R
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP---PEITRRP 704
Query: 428 LVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK-----------L 476
+ ++Q+KAL ++ ++ F +P P EA++ A E+L +LG L K L
Sbjct: 705 VEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRL 764
Query: 477 TSPT---GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIW 522
+ P G +A P+ P +KM+ S + GC ITI A ++++ ++
Sbjct: 765 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 813
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 147/351 (41%), Positives = 219/351 (62%)
Query: 240 VEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEE 299
V+GR F V I Y P SDYV A + T+ IH +E PGDILVFLTGQD+I++ +L+ E
Sbjct: 255 VQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQER 314
Query: 300 ARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVD 359
+ ++ L+ L ++S L +Q +VF+P P G RKV+++TNIAETS+T+ GI YV+D
Sbjct: 315 LQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVID 374
Query: 360 SGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEG 419
GF K R Y+P +E+L V P SKA K +RLY E F K +
Sbjct: 375 PGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEK-LEDST 433
Query: 420 IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSP 479
PE++R NL + ++QLKALGID+I+GFD+ P A+I+AL L+SLG L DD KL +P
Sbjct: 434 KPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENP 493
Query: 480 TGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRF 539
G+Q++ +PLEP+ SK ++ +N+ C EE++ AVLS++SI+ R ++E +K F
Sbjct: 494 VGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHF 553
Query: 540 AAAEGDHVTFLNIYKG---FLQSCKSS-----------HWCHKNFINYHAM 576
A+ EGDH+T+L++Y+ FL+ K++ WC +N++N ++
Sbjct: 554 ASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSL 604
Score = 365 (133.5 bits), Expect = 4.4e-31, P = 4.4e-31
Identities = 99/302 (32%), Positives = 161/302 (53%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 103
+ R+ LP+ ++ V+ + IIVGETGSGKTTQ+PQ+L AG+ G++I TQP
Sbjct: 36 EHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQP 95
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLT 163
RR+A VA R Y+IRF+D T+ T +K++TDG+LLRE + DP L+
Sbjct: 96 RRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGS-TRLKYMTDGLLLREALLDPHLS 154
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL---RLIISSATIEAKSMSAFFHARKG 220
+YSVI+VDEAH+RS+ TD+LL LLKKIQR RS + + + ++ + + +
Sbjct: 155 RYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQ 214
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
L+G + +L P L + + ++ S+Y A + + + ++ P DIL
Sbjct: 215 NGVLKGYQ-GRKLSPLKLIIMSASLDARVF------SEYFGGAKA--VHVQGRQFPVDIL 265
Query: 281 VFLTGQDD-IDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQ--EQVFSPTPRGKRK 337
+ + D +DAT+ + + +K L+ L + E+ ++ P KRK
Sbjct: 266 YTVHPESDYVDATLVTIFQ-IHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRK 324
Query: 338 VV 339
++
Sbjct: 325 LL 326
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 423 (154.0 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 103/321 (32%), Positives = 174/321 (54%)
Query: 258 DYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYS 317
D V+A + + + E G ILVFLTG D+I ++ + +SS ++LPL+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKIN--MNNFLGDSSKFLVLPLHG 542
Query: 318 GLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENL 377
+ Q ++F P KRK+V++TNIAE+S+T++ +VYVVD G +K+ Y+ ++ + L
Sbjct: 543 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 602
Query: 378 VVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA 437
+ + ISKAS CYRLY + + P +PE+ R+ L + +K+
Sbjct: 603 LPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 438 LGIDNILGFDWPASPPPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISK 495
L + +I F A PP+A+ A+E+L ++G L+D +LT P G + +P++P I K
Sbjct: 662 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELT-PLGRHLCTLPVDPNIGK 720
Query: 496 MILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYK 554
M+L C +TI+A L+ +S +V ++E DEAK FA DH+ L Y+
Sbjct: 721 MLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYE 780
Query: 555 GFLQSCKSSH---WCHKNFIN 572
G+ + + + +C +NF++
Sbjct: 781 GYRDAKRGGNEKDFCWQNFLS 801
Score = 311 (114.5 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 71/173 (41%), Positives = 98/173 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYL--KEAGWADGGRV-IACTQ 102
R++LP +K + L V + ++ GETG GKTTQ+PQ++ +E G I CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR++ +VASR Y IR E D T + F T GVLLR +++DP L
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLES-KRSDQTRLLFCTTGVLLRRLIEDPNL 343
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
T S ++VDE HER ++ D LL +L+ + R DLRLI+ SATI A S +F
Sbjct: 344 TNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYF 396
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 671 (241.3 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 166/454 (36%), Positives = 261/454 (57%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----- 196
TAIK++TDG LL+ ++ DP LTK+SVI++DEAHER+++TDIL GLLKK+ + +S
Sbjct: 67 TAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
Query: 197 LRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPV 256
L++++ SAT+E +SAFF G + ++ RL P V + N+ I +
Sbjct: 127 LKVVVMSATMELAKLSAFF----GNCPI--FDIPGRLYP----VREKFCNL-IGPRDREN 175
Query: 257 SDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART-------SKKNSSG 309
+ Y+QA V + IH E GDILVFLTGQ +I+ + +LL + A + G
Sbjct: 176 TAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDG 235
Query: 310 LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
L+ILP Y ++ +Q ++F P P G RK VISTNI+ TSLT++GI YVVD GF KQ +N
Sbjct: 236 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 295
Query: 370 PISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLV 429
P ++ L V PISK+ KC+R+Y+++++ + +P IPE++R++L
Sbjct: 296 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 355
Query: 430 SCVIQLKALGIDNILGFDWPASPPPEAMI-RALEVLYSLGVLDDDAKLTSPTGFQVAEIP 488
S V+ LK L I +++ F + PP E +I AL+ LY +D +T G + E P
Sbjct: 356 SVVLTLKCLAIHDVIRFPY-LDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFP 413
Query: 489 LEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDH 546
L P ++ ++ + L C + ++ I+A+LS++++++ QKE ++ AA G
Sbjct: 414 LPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGF 473
Query: 547 VTFLNIYKGFLQSCKSS----HWCHKNFINYHAM 576
F + F Q CKSS WC K++I++ +
Sbjct: 474 NDFATLAVIFEQ-CKSSGAPASWCQKHWIHWRCL 506
Score = 40 (19.1 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQI 82
Q+QR + + TAI Y+ + I+G+ K + I
Sbjct: 56 QKQRKKIIQAETAIKYMTDGCLLKHILGDPNLTKFSVI 93
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 154/473 (32%), Positives = 265/473 (56%)
Query: 96 RVIACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLRE 155
++I TQPRR+A ++A+R Y +RF + TN+ T +K+LTDG+LLRE
Sbjct: 225 KMIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQ-TKLKYLTDGMLLRE 283
Query: 156 MMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+M D LTKYS I++DEAHER+I TD+++G LK+I S R + + A + F
Sbjct: 284 IMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQI--ITSGKRKDLKIVVMSATLNAELF 341
Query: 216 HARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
G P IL +EG+ + V Y++ D V + +++ I+ EP
Sbjct: 342 SNFFGN--------AP-----ILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEP 388
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GD+L FL GQ++ID ++ L + A + + ++ LPLY+ LS +Q ++F P+G+
Sbjct: 389 EGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGR 448
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RKV+++TNIAETS+T+ G+ YV+DSG K + + + L+ PIS+AS
Sbjct: 449 RKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAG 508
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPE 455
K +RLY E ++ +P + E++R++++ V+ LK LG+D++L + W P +
Sbjct: 509 RESEGKVFRLYPESTYMA-LPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQD 567
Query: 456 AMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAV 515
A++ AL LY+LG L+D K+T+ G++++ +PL P +S +++++ E G +I I++
Sbjct: 568 AILSALNTLYTLGALNDSGKVTT-LGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASC 626
Query: 516 LSIQSIWVSGRG-AQKELDEAKLRFAAAEGDHVTFLNIYKGF-LQSCKSSHWC 566
LS+ ++ + G A+ E++ + + H + +Y+ F + WC
Sbjct: 627 LSVDNLITNVTGEARDEINFKRRQHCPLGNIHGDLIALYEYFQAYQAQGKEWC 679
Score = 367 (134.2 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 75/172 (43%), Positives = 114/172 (66%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R++LP+Y ++ I+ + + TI++GETGSGK+TQIPQ+L + ++I TQPRR
Sbjct: 179 REKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMP----ENPKMIGVTQPRR 234
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A ++A+R Y +RF + TN+ T +K+LTDG+LLRE+M D LTKY
Sbjct: 235 VAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQ-TKLKYLTDGMLLREIMLDSNLTKY 293
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRC--RSDLRLIISSATIEAKSMSAFF 215
S I++DEAHER+I TD+++G LK+I R DL++++ SAT+ A+ S FF
Sbjct: 294 STIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFF 345
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 403 (146.9 bits), Expect = 4.5e-67, Sum P(2) = 4.5e-67
Identities = 110/317 (34%), Positives = 170/317 (53%)
Query: 267 VLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNS--SGLIILPLYSGLSRAEQ 324
V I + EP G ILVFL G D I +L ++ +TSK + + PL+S + EQ
Sbjct: 413 VYYICENEPEGAILVFLPGYDKISQLYNIL-DKPKTSKGQRWRDHMAVFPLHSLMQSGEQ 471
Query: 325 EQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISK 384
+ VF P G+RKV+IST IAETS+T++ +VYV++SG +K Y+ ++I++L ++K
Sbjct: 472 QAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTK 531
Query: 385 ASXXXXXXXXXXXXXXKCYRLYTE--EYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN 442
A+ CY L++ E + +IP PE+ RS L S ++ LK L ID+
Sbjct: 532 ANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPT---PEILRSKLESIILSLKLLHIDD 588
Query: 443 ILGFDWPA--SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSS 500
F +P PEA+ +E+L + LD LT P G +A++P++P + KMIL S
Sbjct: 589 PYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLT-PLGMHLAKLPIDPQMGKMILMS 647
Query: 501 NELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQS 559
C + I + +A LS +S + S G + +DE K R A DH+ N + S
Sbjct: 648 ALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDS 707
Query: 560 CKSSH----WCHKNFIN 572
+ SH +C+KNF++
Sbjct: 708 -RYSHAERDFCYKNFLS 723
Score = 317 (116.6 bits), Expect = 4.5e-67, Sum P(2) = 4.5e-67
Identities = 73/186 (39%), Positives = 106/186 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE----AGWADGGRVIACT 101
R++LP KY I+ V + +IVG TG GKTTQ+PQ L + G A R+I CT
Sbjct: 150 RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII-CT 208
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR++ A+A Y IR E ++ +I + T GVLL+++ DPL
Sbjct: 209 QPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPL 268
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
+ SV+++DE HERS+ TD+L+GLLK I R DL++I+ SAT+ + +F+
Sbjct: 269 MHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMF 328
Query: 222 RGLEGV 227
R +EGV
Sbjct: 329 R-IEGV 333
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 423 (154.0 bits), Expect = 5.5e-67, Sum P(2) = 5.5e-67
Identities = 99/308 (32%), Positives = 168/308 (54%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG +L+FL G +I + L A + ++S ++ PL+S LS EQ+ VF P G
Sbjct: 839 PPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAG 898
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+P +E+L +S+A+
Sbjct: 899 VIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRA 958
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS--- 451
C+ L++ ++ ++ + +PE+QR L +++K L + + S
Sbjct: 959 GRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLI 1018
Query: 452 -PPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA ++ L LG L D KLT P G+ +A +P++ I K++L C +
Sbjct: 1019 EPPRTESLRASKLRLQDLGALTADEKLT-PLGYHLASLPVDVRIGKLMLFGTIFRCLDPA 1077
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCK-----SSH 564
+TI+A L+ +S +VS ++E ++ KL FA D++ L YKG+ S K S +
Sbjct: 1078 LTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDYLALLQAYKGWRLSTKEGSQASYN 1137
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1138 YCRENFLS 1145
Score = 302 (111.4 bits), Expect = 5.5e-67, Sum P(2) = 5.5e-67
Identities = 68/176 (38%), Positives = 98/176 (55%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIA---CT 101
+RQ+LP ++ R IL L+ +H ++ G TG GKTTQIPQ++ +A +A CT
Sbjct: 533 ERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICT 592
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 593 QPRRISAISVAERVAKERTERVGVTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDLT 651
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHA 217
L + ++VDE HER+ +D LL +LK I R DLR+I+ SAT+ A+ S +FH+
Sbjct: 652 LQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHS 707
Score = 38 (18.4 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 75 GSGKTTQIPQYLK-EAGWADGGRVIACTQPRRLAVQAVASR 114
GSG+ P YL E W+ V T PR A +A A +
Sbjct: 134 GSGEDDDEPDYLDDEQCWSADQEVSDMT-PRSSA-EAAAHK 172
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 686 (246.5 bits), Expect = 9.0e-67, P = 9.0e-67
Identities = 132/338 (39%), Positives = 214/338 (63%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR F V++ + PV DYV AAV + IH GDIL+F+ GQ+DI+ T +++ E
Sbjct: 613 TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKE 672
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
+ + + L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++V+
Sbjct: 673 KLGELDE-APPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVI 731
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
D GF K + YNP ++ L + P+S+AS +CYRLYTE F E+
Sbjct: 732 DPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKS 791
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
+PE+QR+NL + V+ LK+LG+D++L F + +PP + M+ ++ L++LG LD+ +LT
Sbjct: 792 TVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLT- 850
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
P G ++ E PL+P +SKM++ S E+GCS+E++TI ++LS+ +I+ +G ++E D K +
Sbjct: 851 PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEK 910
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
F E DH+TFLN+Y + S+ WC N+++ A+
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKAL 948
Score = 500 (181.1 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 109/257 (42%), Positives = 159/257 (61%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LPV+ R ++ ++ + IIVGETGSGKTTQ+ QYL E G+ D G +I CTQ
Sbjct: 435 KQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG-LIGCTQ 493
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y IRFED T++ T IK++TDG+LLRE + D L
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TIIKYMTDGILLRECLGDGSL 552
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+YS I++DEAHERS++TD+L GLL+++ R+DL+LI++SAT++A + FF
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGN---- 608
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
P ++ GR F V++ + PV DYV AAV + IH GDIL+F
Sbjct: 609 -------CPTF-----TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 283 LTGQDDIDATIQLLTEE 299
+ GQ+DI+ T +++ E+
Sbjct: 657 MPGQEDIECTCEMIKEK 673
Score = 44 (20.5 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 493 ISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
+ M S E S + + + +V +++++ R AQKE++ K
Sbjct: 1054 LGPMFYSIKESKQSRKELKMESVRTVETMEAEMREAQKEMERRK 1097
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 686 (246.5 bits), Expect = 9.0e-67, P = 9.0e-67
Identities = 132/338 (39%), Positives = 214/338 (63%)
Query: 239 SVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTE 298
++ GR F V++ + PV DYV AAV + IH GDIL+F+ GQ+DI+ T +++ E
Sbjct: 613 TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKE 672
Query: 299 EARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVV 358
+ + + L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++V+
Sbjct: 673 KLGELDE-APPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVI 731
Query: 359 DSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAE 418
D GF K + YNP ++ L + P+S+AS +CYRLYTE F E+
Sbjct: 732 DPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKS 791
Query: 419 GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTS 478
+PE+QR+NL + V+ LK+LG+D++L F + +PP + M+ ++ L++LG LD+ +LT
Sbjct: 792 TVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLT- 850
Query: 479 PTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLR 538
P G ++ E PL+P +SKM++ S E+GCS+E++TI ++LS+ +I+ +G ++E D K +
Sbjct: 851 PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEK 910
Query: 539 FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
F E DH+TFLN+Y + S+ WC N+++ A+
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKAL 948
Score = 500 (181.1 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 109/257 (42%), Positives = 159/257 (61%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
++QR+ LPV+ R ++ ++ + IIVGETGSGKTTQ+ QYL E G+ D G +I CTQ
Sbjct: 435 KQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG-LIGCTQ 493
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +VA R Y IRFED T++ T IK++TDG+LLRE + D L
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TIIKYMTDGILLRECLGDGSL 552
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+YS I++DEAHERS++TD+L GLL+++ R+DL+LI++SAT++A + FF
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGN---- 608
Query: 223 GLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVF 282
P ++ GR F V++ + PV DYV AAV + IH GDIL+F
Sbjct: 609 -------CPTF-----TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 283 LTGQDDIDATIQLLTEE 299
+ GQ+DI+ T +++ E+
Sbjct: 657 MPGQEDIECTCEMIKEK 673
Score = 44 (20.5 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 493 ISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAK 536
+ M S E S + + + +V +++++ R AQKE++ K
Sbjct: 1054 LGPMFYSIKESKQSRKELKMESVRTVETMEAEMREAQKEMERRK 1097
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 418 (152.2 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 99/329 (30%), Positives = 173/329 (52%)
Query: 258 DYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYS 317
D V++ + ++ PPG +LVFL G +I + L + + ++ ++ PL+S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 318 GLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENL 377
LS EQ+ VF+ G K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 378 VVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA 437
+S+A+ C+ L+T F + + +PE+QR L +++K
Sbjct: 992 EDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKV 1051
Query: 438 LGI--DNILG--FDWPASPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPM 492
L + + L F PP E + A + L +LG L D+ LT P G+ +A +P++
Sbjct: 1052 LEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLT-PLGWHLACLPVDVR 1110
Query: 493 ISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNI 552
I K++L C + +TI+A L+ +S +VS ++E +E KL F+ A DH+ +
Sbjct: 1111 IGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQA 1170
Query: 553 YKGFLQSCKSS-----HWCHKNFINYHAM 576
YKG+ + +S +C +NF++ +
Sbjct: 1171 YKGWCNAAQSGFKAGYQYCRENFLSIRGL 1199
Score = 300 (110.7 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 70/178 (39%), Positives = 103/178 (57%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE----AGWADGGRVI 98
++QRQ+LP ++ R AIL + + +I G TG GKTTQIPQ++ + G D I
Sbjct: 576 QEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANI 635
Query: 99 ACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
CTQPRR++ AVA+R Y IR E +T + F T GVLLR +
Sbjct: 636 ICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLET-VRSSITRLMFCTTGVLLRRLEG 694
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
DP L+ + ++VDE HER+ +D LL +LK + R+DL++I+ SAT+ A+ S +F+
Sbjct: 695 DPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFN 752
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 428 (155.7 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 102/308 (33%), Positives = 170/308 (55%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG ILVFL G +I + L + + + S+ +I PL+S LS EQ+ VF P G
Sbjct: 846 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 905
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 906 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 965
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG-FDWPA 450
C+ L+T ++ ++ + +PE+QR L +++K L + N+ F
Sbjct: 966 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 1025
Query: 451 SPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA ++ L LG L D +LT P G+ +A +P++ I K++L + C +
Sbjct: 1026 EPPHTDSLRASKIRLRDLGALTPDERLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPA 1084
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCK-----SSH 564
+TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K S +
Sbjct: 1085 LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYN 1144
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1145 YCRQNFLS 1152
Score = 278 (102.9 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 68/177 (38%), Positives = 96/177 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA---GWADGGRVIAC 100
++RQ LP ++ R IL L+ H +I G TG GKTTQIPQ++ + G + I C
Sbjct: 539 QERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 598
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 599 TQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDT 657
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHA 217
L S I+VDE HER+ +D LL +LK I R L++I+ SAT+ A+ S +F++
Sbjct: 658 ALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNS 714
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 422 (153.6 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 104/313 (33%), Positives = 170/313 (54%)
Query: 271 HDKEP-PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
H P PG ILVFL G +I + L + + + S+ +I PL+S LS EQ+ VF
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 895
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
P G K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 896 KPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 955
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG- 445
C+ L+T +F ++ + +PE+QR L +++K L + N+
Sbjct: 956 RKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSV 1015
Query: 446 FDWPASPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELG 504
F PP +RA ++ L LG L D LT P G+ +A +P++ I K++L +
Sbjct: 1016 FARLIEPPHADSLRASKIRLRDLGALTPDETLT-PLGYHLASLPVDVRIGKLMLFGSIFR 1074
Query: 505 CSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCK--- 561
C + +TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K
Sbjct: 1075 CLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGM 1134
Query: 562 --SSHWCHKNFIN 572
S ++C +NF++
Sbjct: 1135 RASYNYCRQNFLS 1147
Score = 271 (100.5 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 66/177 (37%), Positives = 96/177 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA---GWADGGRVIAC 100
++RQ LP ++ R IL L+ H ++ G TG GKTTQIPQ++ + G + I C
Sbjct: 532 QERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 591
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 592 TQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDT 650
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHA 217
L + I+VDE HER+ +D LL +LK I R L++I+ SAT+ A+ S +F++
Sbjct: 651 ALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNS 707
Score = 38 (18.4 bits), Expect = 5.9e-65, Sum P(3) = 5.9e-65
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 3 QFWKPGAEKPRLLDDE 18
Q+W PG E + D +
Sbjct: 139 QYWSPGREASLVPDSD 154
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 429 (156.1 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 103/308 (33%), Positives = 169/308 (54%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG ILVFL G +I + L + + + S ++ PL+S LS EQ+ VF P G
Sbjct: 842 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVG 901
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 902 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 961
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG-FDWPA 450
C+ L+T +F ++ + +PE+QR L +++K L + N+ F
Sbjct: 962 GRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1021
Query: 451 SPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA ++ L LG L D KLT P G+ +A +P++ I K++L + C +
Sbjct: 1022 EPPHTDSLRASKIRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPA 1080
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCK-----SSH 564
+TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K S +
Sbjct: 1081 LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYN 1140
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1141 YCRQNFLS 1148
Score = 276 (102.2 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 67/175 (38%), Positives = 96/175 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE---AGWADGGRVIAC 100
++RQ LP ++ R IL L+ H +I G TG GKTTQIPQ++ + +G + I C
Sbjct: 535 QERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIIC 594
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 595 TQPRRISAISVAERVAKERTERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDT 653
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L + I+VDE HER+ +D LL +LK I R +L++I+ SAT+ A+ S +F
Sbjct: 654 SLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYF 708
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 405 (147.6 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 102/308 (33%), Positives = 176/308 (57%)
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
E PG +LVF+TG DDI++ L EA + + + +++L + ++ +EQ +F P
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQL--EAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPE 633
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TN+AETS+T+ +VYV+D G +K+ Y+ +++ L+ + ISKA+
Sbjct: 634 GIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGR 693
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAE-GIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
+CY LY V E A+ PE+ R+ L S +Q+K+LG+ +I F A
Sbjct: 694 AGRVMPGECYHLYPR--CVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 453 PPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
PPEA+ A+E L +G LDDD LT P G ++ +P+EP + KM++ C + ++
Sbjct: 752 PPEALSVQNAVEYLKIIGALDDDENLT-PLGKNLSMLPVEPKLGKMLILGAIFNCLDPVM 810
Query: 511 TISAVLSIQSIWVSGRGAQKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSCKSSH---- 564
T+ A LS++ ++ +K+L E A+ +F+ + DH+T + Y G+ + + +H
Sbjct: 811 TVVAGLSVRDPFLMPFD-KKDLAETARSKFSGRDYSDHLTLVRAYNGW-KDAERTHSGYD 868
Query: 565 WCHKNFIN 572
+C KNF++
Sbjct: 869 YCWKNFLS 876
Score = 295 (108.9 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 67/173 (38%), Positives = 99/173 (57%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW--ADGGRV-IACTQ 102
R+ LP YK + A+L + + ++ GETG GKTTQ+PQY+ E+ A G I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR++ +V+ R Y +R E +D T + F T GVLLR ++ D L
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRD-TRLLFCTTGVLLRRLLVDRSL 414
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER ++ D LL +LK + R DL+LI+ SAT+ A+ S++F
Sbjct: 415 KGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYF 467
Score = 40 (19.1 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEART 302
+ DK P ++++ Q ++DA + ++ +T
Sbjct: 199 LDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKT 231
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 425 (154.7 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 104/308 (33%), Positives = 169/308 (54%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG ILVFL G +I + L + + + S +I PL+S LS EQ+ VF P G
Sbjct: 798 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLG 857
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 858 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 917
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG-FDWPA 450
C+ L+T ++ ++ + +PE+QR L +++K L + N+ F
Sbjct: 918 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 977
Query: 451 SPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA +V L LG L D KLT P G+ +A +P++ I K++L + C +
Sbjct: 978 EPPHVDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1036
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS-----H 564
+TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K S +
Sbjct: 1037 LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYN 1096
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1097 YCRQNFLS 1104
Score = 275 (101.9 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 68/175 (38%), Positives = 95/175 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW-ADGGRV--IAC 100
++RQ LP ++ R IL L+ H +I G TG GKTTQIPQ++ + RV I C
Sbjct: 490 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 549
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 550 TQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDA 608
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L + I+VDE HER+ +D LL +LK I R+ L++I+ SAT++A S +F
Sbjct: 609 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 663
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 425 (154.7 bits), Expect = 2.4e-64, Sum P(2) = 2.4e-64
Identities = 104/308 (33%), Positives = 169/308 (54%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG ILVFL G +I + L + + + S +I PL+S LS EQ+ VF P G
Sbjct: 851 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLG 910
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 911 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 970
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG-FDWPA 450
C+ L+T ++ ++ + +PE+QR L +++K L + N+ F
Sbjct: 971 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1030
Query: 451 SPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA +V L LG L D KLT P G+ +A +P++ I K++L + C +
Sbjct: 1031 EPPHVDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1089
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS-----H 564
+TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K S +
Sbjct: 1090 LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYN 1149
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1150 YCRQNFLS 1157
Score = 275 (101.9 bits), Expect = 2.4e-64, Sum P(2) = 2.4e-64
Identities = 68/175 (38%), Positives = 95/175 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW-ADGGRV--IAC 100
++RQ LP ++ R IL L+ H +I G TG GKTTQIPQ++ + RV I C
Sbjct: 543 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 602
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 603 TQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDA 661
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L + I+VDE HER+ +D LL +LK I R+ L++I+ SAT++A S +F
Sbjct: 662 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 716
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 424 (154.3 bits), Expect = 3.1e-64, Sum P(2) = 3.1e-64
Identities = 103/308 (33%), Positives = 169/308 (54%)
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
PPG +LVFL G +I + L + + + S +I PL+S LS EQ+ VF P G
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMG 907
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
K++ISTNIAETS+T++ +VYV+DSG K++ Y+ +E+L +S+A+
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 967
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI---DNILG-FDWPA 450
C+ L+T ++ ++ + +PE+QR L +++K L + N+ F
Sbjct: 968 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1027
Query: 451 SPPPEAMIRALEV-LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP +RA +V L LG L D KLT P G+ +A +P++ I K++L + C +
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1086
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS-----H 564
+TI+A L+ +S +VS ++E ++ KL FA A D++ L YKG+ S K S +
Sbjct: 1087 LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYN 1146
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 1147 YCRQNFLS 1154
Score = 275 (101.9 bits), Expect = 3.1e-64, Sum P(2) = 3.1e-64
Identities = 68/175 (38%), Positives = 95/175 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW-ADGGRV--IAC 100
++RQ LP ++ R IL L+ H +I G TG GKTTQIPQ++ + RV I C
Sbjct: 540 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 599
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y IR E T + + T GVLLR + D
Sbjct: 600 TQPRRISAISVAERVAKERAERVGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDA 658
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L + I+VDE HER+ +D LL +LK I R+ L++I+ SAT++A S +F
Sbjct: 659 TLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYF 713
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 414 (150.8 bits), Expect = 8.2e-64, Sum P(2) = 8.2e-64
Identities = 105/341 (30%), Positives = 183/341 (53%)
Query: 251 YVEEPVS---DYVQAAVSTVLL-IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKN 306
Y+ EP++ + +++ + ++ HD G IL+FL G +I + L + A S +
Sbjct: 723 YLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPR- 781
Query: 307 SSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQR 366
+ I++PL+S LS +Q VF P GKRK+V+STNIAETS+T++ V+VVD G K++
Sbjct: 782 AGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEK 841
Query: 367 FYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRS 426
++ ++E+L + +S+A+ C LYT + I A+ +PE+QR
Sbjct: 842 CFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRV 901
Query: 427 NLVSCVIQLKAL---GIDNILG--FDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTG 481
L V+++K L N L + +P ++++ AL L +G LD + +LT P G
Sbjct: 902 PLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLT-PLG 960
Query: 482 FQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA 541
+A +P++ I K++L C + ++TI+A LS +S +VS + E D+ K FA
Sbjct: 961 HHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFAL 1020
Query: 542 AEGDHVTFLNIYKGFLQSCKSSHWC-HKNFINYHAMVRNLI 581
DH+T LN Y+ +L + ++ +N+ + H + N +
Sbjct: 1021 GNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTL 1061
Score = 280 (103.6 bits), Expect = 8.2e-64, Sum P(2) = 8.2e-64
Identities = 67/180 (37%), Positives = 99/180 (55%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-------- 97
R++LP + IL L+E+ +I GETG GK+TQ+PQ++ + + ++
Sbjct: 450 RKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPH 509
Query: 98 --IACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLRE 155
I CTQPRRL+ VA R Y IR E+ ++ T + F T G+LLR
Sbjct: 510 VEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQS-TRLSFCTTGILLRR 568
Query: 156 MMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ DPLL + ++VDE HERS +D LL +LK + R R DL++I+ SAT+ A S +F
Sbjct: 569 LASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYF 628
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 659 (237.0 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 183/548 (33%), Positives = 283/548 (51%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LP+ + I ++ + II GETGSGKTTQIP+ E G G +I TQPRR+A
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDG-LIGHTQPRRIAA 157
Query: 109 QAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+ VA+R Y +RF D ++ + IK +TDG+LL EM D LL KY I
Sbjct: 158 RTVANRIAEELGTKLGEQVGYKVRFNDQVSEQ-SYIKLMTDGILLAEMQRDRLLLKYDTI 216
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVE 228
++DEAHERS++ D +LG LK+I R DL+LII+SATI+ + + F ++ G +E
Sbjct: 217 IIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPA-PIIE 275
Query: 229 LVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP---GDILVFLTG 285
+ R P + + R N + ++ S +S +L D+ GDILVFL G
Sbjct: 276 VSGRTFP--VEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNG 333
Query: 286 QDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIA 345
+ +I T L K N +LPLY+ L+ +EQ Q+F P R +V++TN+A
Sbjct: 334 EREIRDTAAALV------KANLRHTNVLPLYARLTVSEQNQIFKP--HSGRNIVLATNVA 385
Query: 346 ETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRL 405
ETSLT+ GI YV+D G ++ Y+ + ++ L + P+S+AS C RL
Sbjct: 386 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRL 445
Query: 406 YTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAM---IRALE 462
Y+E+ + PE+ R+NL + ++Q+ AL + +I F + +P + +R LE
Sbjct: 446 YSEDDYKSRAEFTD-PEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLE 504
Query: 463 ---VLYSLGVLDDDAK-LTSPTGFQV-------AEIPLEPMISKMILSSNELGCSEEIIT 511
+ S+ D +AK S T Q+ A+ P++P ++KM++SS E GC E+I+
Sbjct: 505 EIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILI 564
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKS------SHW 565
I + LSIQ Q+ DE RF D ++ LN+++ + K
Sbjct: 565 IVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKDLTQNQFRKL 624
Query: 566 CHKNFINY 573
C + F++Y
Sbjct: 625 CQREFLSY 632
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 399 (145.5 bits), Expect = 3.2e-63, Sum P(2) = 3.2e-63
Identities = 102/283 (36%), Positives = 156/283 (55%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD---GGR--V 97
E+ R+ LP+ I+ + H II G+TG GKTTQ+PQ+L EAG+ R +
Sbjct: 235 EETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGI 294
Query: 98 IACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM 157
I TQPRR+AV A A R + +R++ ++ ++IKF+TDG+LLRE+
Sbjct: 295 IGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGEN-SSIKFMTDGILLREIQ 353
Query: 158 DDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKS-- 210
+D LL +YSVI++DEAHERS++TDIL+G+L ++ + R + + + S T+ ++
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413
Query: 211 -------MSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEP-VSDYVQA 262
MSA + G L P + P ++ V R + V IH+ ++ + DY+
Sbjct: 414 TPLKLILMSATLRVEDF---VSGKRLFPNIPP-LIEVPTRQYPVTIHFSKKTEIVDYIGE 469
Query: 263 AVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKK 305
A V+ IH K P G ILVF+TGQ ++D L E+ R S K
Sbjct: 470 AYKKVMSIHKKLPQGGILVFVTGQREVD----YLCEKLRKSSK 508
Score = 289 (106.8 bits), Expect = 3.2e-63, Sum P(2) = 3.2e-63
Identities = 70/203 (34%), Positives = 108/203 (53%)
Query: 298 EEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E + K S G L +LPLY+ LS A Q +VF + +R VV++TN+AETSLT+ GI Y
Sbjct: 634 EAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKY 693
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIP 416
VVD+G K + Y+ + +E+ V IS+AS CYRLY+ F
Sbjct: 694 VVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFE 753
Query: 417 AEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKL 476
+PE+ + + ++ +K++ I + F +P P P A+ A L +L LD + L
Sbjct: 754 ESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGL 813
Query: 477 TSPTGFQVAEIPLEPMISKMILS 499
T P G ++ P+ P S+M+L+
Sbjct: 814 T-PLGKAMSHYPMSPRHSRMLLT 835
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 337 (123.7 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 77/213 (36%), Positives = 122/213 (57%)
Query: 312 ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPI 371
IL LYS L +Q+ +F P P RKV++STNIAETS+T+ I YV+DSG K ++++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 372 SDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSC 431
L V ISK S + YR+YT+E + P IPE+ RS+L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFL-IPEIFRSDLTQI 520
Query: 432 VIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEP 491
++LKA+ I+N L F++P +P E + + ++L+ + +D + LT G ++ PL P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD-LGKKLCLFPLNP 579
Query: 492 MISKMILSSNELGCSEEIITISAVLSIQSIWVS 524
+ + ++L S E C +EI TI A+L+ SI+++
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIFLN 612
Score = 232 (86.7 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 50/115 (43%), Positives = 72/115 (62%)
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXX-YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
PRR+A VA R YTIRF++ + D T IKF+TDG+L+RE+M+DPL
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCS-DKTRIKFVTDGILIREIMNDPL 135
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
L KY +++DE HERSI TD+LLG K + + R +++I+ SAT + + FF+
Sbjct: 136 LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Score = 103 (41.3 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 47 QRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE 88
+ LP+ KY+ I L++ + II GETG GKTTQ+PQ + E
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 69 (29.3 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 235 PAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH 271
P I+++ + + I+Y + DY+ + VST+L IH
Sbjct: 192 PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 60 (26.2 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
GDILVFL GQ++I+ +L E+ + K +
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGN 347
Score = 48 (22.0 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 530 KELDEAKLRFAAAEGDHVTFLNIYKGFLQSC--KSSHWCHKNFIN 572
K ++ A+ + +GDH+T L+I+ + ++ + H+C+ +N
Sbjct: 699 KLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALN 743
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 337 (123.7 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 77/213 (36%), Positives = 122/213 (57%)
Query: 312 ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPI 371
IL LYS L +Q+ +F P P RKV++STNIAETS+T+ I YV+DSG K ++++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 372 SDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSC 431
L V ISK S + YR+YT+E + P IPE+ RS+L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFL-IPEIFRSDLTQI 520
Query: 432 VIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEP 491
++LKA+ I+N L F++P +P E + + ++L+ + +D + LT G ++ PL P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD-LGKKLCLFPLNP 579
Query: 492 MISKMILSSNELGCSEEIITISAVLSIQSIWVS 524
+ + ++L S E C +EI TI A+L+ SI+++
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIFLN 612
Score = 232 (86.7 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 50/115 (43%), Positives = 72/115 (62%)
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXX-YTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
PRR+A VA R YTIRF++ + D T IKF+TDG+L+RE+M+DPL
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCS-DKTRIKFVTDGILIREIMNDPL 135
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
L KY +++DE HERSI TD+LLG K + + R +++I+ SAT + + FF+
Sbjct: 136 LKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFN 190
Score = 103 (41.3 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 47 QRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE 88
+ LP+ KY+ I L++ + II GETG GKTTQ+PQ + E
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 69 (29.3 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 235 PAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH 271
P I+++ + + I+Y + DY+ + VST+L IH
Sbjct: 192 PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 60 (26.2 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
GDILVFL GQ++I+ +L E+ + K +
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGN 347
Score = 48 (22.0 bits), Expect = 6.6e-62, Sum P(6) = 6.6e-62
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 530 KELDEAKLRFAAAEGDHVTFLNIYKGFLQSC--KSSHWCHKNFIN 572
K ++ A+ + +GDH+T L+I+ + ++ + H+C+ +N
Sbjct: 699 KLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALN 743
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 427 (155.4 bits), Expect = 8.0e-62, Sum P(2) = 8.0e-62
Identities = 83/170 (48%), Positives = 116/170 (68%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRR 105
R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ + G IACTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
+A +VA+R Y+IRFED T+ + T ++++TDG+LLRE + +P L Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEPDLASY 514
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
SV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 515 SVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFF 564
Score = 231 (86.4 bits), Expect = 8.0e-62, Sum P(2) = 8.0e-62
Identities = 44/101 (43%), Positives = 64/101 (63%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+ + GR F V I Y + P +DY++A V +VL IH +PPGDILVFLTGQ++I+A ++L
Sbjct: 569 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 628
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
+ R L++LP+Y+ L Q ++F PTP G RK
Sbjct: 629 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 355 (130.0 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 91/261 (34%), Positives = 142/261 (54%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA--DGGR---VIAC 100
R LP+ +I+ ++ + II GETGSGKTTQ+PQ+L E+G+ + G +I
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A + A R Y IR++ + + IKF+TDG+L+RE+ D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKS---MSAFFHA 217
LL++YS I++DEAHER+++TDIL+GLL +I R L L S AT +A + +
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYLK-SLATNKANGTIGVDMIYPL 580
Query: 218 R----KGRRGLEGVELVPRL---EPAILSVEGRGFNVQIHYVEEP-VSDYVQAAVSTVLL 269
+ +E L P ++++ R F V IH+ ++ + +Y+ V+
Sbjct: 581 KLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVVK 640
Query: 270 IHDKEPPGDILVFLTGQDDID 290
IH P G ILVF+TG+ +I+
Sbjct: 641 IHKNLPSGGILVFVTGKQEIE 661
Score = 349 (127.9 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 80/226 (35%), Positives = 125/226 (55%)
Query: 295 LLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGI 354
++TE+ +K + L +LPLYS L ++Q +VF P G R VV++TN+AETSLT+ I
Sbjct: 834 IITED---DEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNI 890
Query: 355 VYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKE 414
YVVD+G KQR+YN + I + V SKAS CYR+Y+ F
Sbjct: 891 KYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDH 950
Query: 415 IPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR-ALEVLYSLGVLDDD 473
PE+ + ++Q+K++GI I GF +P +PP E+ ++ AL L +LG L+
Sbjct: 951 FQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFP-TPPDESSLKLALRTLINLGALEVK 1009
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
+ G ++++ P+ P SKM+L E C II I ++L+++
Sbjct: 1010 TFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVK 1055
Score = 42 (19.8 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 543 EGDHVTFLNIYKGF-LQSCKS----SHWCHKNFINYHAM 576
E D ++ L + + Q KS H+C +NF+N +M
Sbjct: 1117 ESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSM 1155
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 569 (205.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 128/285 (44%), Positives = 171/285 (60%)
Query: 61 LVETHATTIIVGETGSGKTTQ----IP--QYLKEAGWADGGRVIACTQPRRLAVQAVASR 114
L E TT++ + Q +P +YL EAGW GRV+ TQPRR+A VA R
Sbjct: 25 LAENSGTTVVYNPYAALSIEQQRQKLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGR 84
Query: 115 XXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAH 174
Y IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAH
Sbjct: 85 VAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAH 144
Query: 175 ERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLE 234
ER++ TDI +GLLKKIQ+ R DLRLI++SAT++A FF+ + R
Sbjct: 145 ERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNE-------TSDPARDT 197
Query: 235 PAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQ 294
IL+VEGR F V I Y++ PV DY+++ V TV+ IH E GD+L FLTGQ++++ +
Sbjct: 198 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVS 257
Query: 295 LLTEEARTSKKNSSG--LIILPLYSGLSRAEQEQVFSPTPRGKRK 337
+L E+AR + L +LP+Y+GL EQ +VF R RK
Sbjct: 258 MLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
Score = 74 (31.1 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFXXXXXXXXXXXXXXXXXXEKQRQRLPVYKY 54
+FW+PG E P + EE + E+QRQ+LPV+KY
Sbjct: 5 KFWRPGTEGPGVSISEERQSL-AENSGTTVVYNPYAALSIEQQRQKLPVFKY 55
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 631 (227.2 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 167/554 (30%), Positives = 291/554 (52%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACTQ 102
QR +LP + + +++ + + T+I GETGSGK+TQ+ Q++ + ++ G I CTQ
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQ 628
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP-- 160
PRRL+ ++A R Y IR E+ T+ + T I F T GVLLR +
Sbjct: 629 PRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSN-TRITFATTGVLLRMLQSSKKN 687
Query: 161 -LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
+L I++DE HERS+ D LL LLKK+ + L++I+ SATI + FF
Sbjct: 688 GVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPL 747
Query: 220 GRRGLEGVELVP----RLEPAILSVEGRGFNVQIHYVEEPVSD---YVQAAVSTVLLIH- 271
+EG P L+ + E + N ++ P +D Y ++ L+ H
Sbjct: 748 TPLHIEG-RTYPIQDFYLDSILAESEYKFQNSDGEFIT-PSADSHFYKSGNLNYELIAHV 805
Query: 272 ----DK------EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
DK + G IL+FL G +I +TI+ + +K + + + LPL+SGL+
Sbjct: 806 TRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEI------NKSSDNKFMALPLHSGLTS 859
Query: 322 AEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAP 381
AEQ+ +F P+GKRKVV+STNIAETS+T+ V V+D+G SK F++ + L+ +
Sbjct: 860 AEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESW 919
Query: 382 ISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID 441
S+A CY LYT+E F + + + IPE++R+ L + + +K++GI
Sbjct: 920 CSQAEVRQRRGRAGRVTAGTCYHLYTKETF-EAMQKQPIPEIKRTRLENLYLVVKSMGIS 978
Query: 442 NILGF--DWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILS 499
N+ F +P ++ +A + L+ +G L +++ LT G ++ +P +P +K+++
Sbjct: 979 NVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTK-LGNYISYLPTDPQSAKLLIL 1036
Query: 500 SNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
GC + +T++A+ S S +++ + +L + + +F +GD ++ N Y ++ +
Sbjct: 1037 GCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMSN 1096
Query: 560 CKSSHWCHKNFINY 573
KS + +N+++Y
Sbjct: 1097 -KSKRFLTENYLSY 1109
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 631 (227.2 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 167/554 (30%), Positives = 291/554 (52%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACTQ 102
QR +LP + + +++ + + T+I GETGSGK+TQ+ Q++ + ++ G I CTQ
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQ 628
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP-- 160
PRRL+ ++A R Y IR E+ T+ + T I F T GVLLR +
Sbjct: 629 PRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSN-TRITFATTGVLLRMLQSSKKN 687
Query: 161 -LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
+L I++DE HERS+ D LL LLKK+ + L++I+ SATI + FF
Sbjct: 688 GVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPL 747
Query: 220 GRRGLEGVELVP----RLEPAILSVEGRGFNVQIHYVEEPVSD---YVQAAVSTVLLIH- 271
+EG P L+ + E + N ++ P +D Y ++ L+ H
Sbjct: 748 TPLHIEG-RTYPIQDFYLDSILAESEYKFQNSDGEFIT-PSADSHFYKSGNLNYELIAHV 805
Query: 272 ----DK------EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
DK + G IL+FL G +I +TI+ + +K + + + LPL+SGL+
Sbjct: 806 TRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEI------NKSSDNKFMALPLHSGLTS 859
Query: 322 AEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAP 381
AEQ+ +F P+GKRKVV+STNIAETS+T+ V V+D+G SK F++ + L+ +
Sbjct: 860 AEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESW 919
Query: 382 ISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID 441
S+A CY LYT+E F + + + IPE++R+ L + + +K++GI
Sbjct: 920 CSQAEVRQRRGRAGRVTAGTCYHLYTKETF-EAMQKQPIPEIKRTRLENLYLVVKSMGIS 978
Query: 442 NILGF--DWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILS 499
N+ F +P ++ +A + L+ +G L +++ LT G ++ +P +P +K+++
Sbjct: 979 NVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTK-LGNYISYLPTDPQSAKLLIL 1036
Query: 500 SNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
GC + +T++A+ S S +++ + +L + + +F +GD ++ N Y ++ +
Sbjct: 1037 GCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMSN 1096
Query: 560 CKSSHWCHKNFINY 573
KS + +N+++Y
Sbjct: 1097 -KSKRFLTENYLSY 1109
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 158/550 (28%), Positives = 283/550 (51%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACT 101
K+R+ LP++K + + + + + ++ G++ GK++Q+PQ+ E + + + CT
Sbjct: 57 KEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 116
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
Q + +A R Y I FE+ + T +++ TD +L REMM +P
Sbjct: 117 QAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE-TILRYCTDDMLQREMMSNPF 175
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L Y VI++D+ HERS++TD+LLGLLK + R +L+LI++ + + +S+++ G
Sbjct: 176 LGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYY----GD 231
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
VP ++ V + V++ Y+ D ++ + + IH GD++V
Sbjct: 232 --------VP-----VIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVV 277
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK------ 335
FL + DI+ T +L+ +E + L+++PLY E+ +F P +
Sbjct: 278 FLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLYP----KEKCSLFRPVDETEKRCQVY 333
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
R+VV++T+ E+ + + +V+D G +++ YNP +LV+ PIS++
Sbjct: 334 QRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 393
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
K + LYTEE+ K++ EMQ +NL S V+ +K + I + D+ P P
Sbjct: 394 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 453
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E++++ALE L L LD+D L S G ++E PL+P +SK IL+S E C +E++TI+A
Sbjct: 454 ESLMQALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAA 512
Query: 515 VLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS---H----WC 566
+++ S ++ GA++ F EGDH T +N+Y + + +S H WC
Sbjct: 513 MVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWC 572
Query: 567 HKNFINYHAM 576
H F++ A+
Sbjct: 573 HDCFLSCSAL 582
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 627 (225.8 bits), Expect = 2.3e-60, P = 2.3e-60
Identities = 167/538 (31%), Positives = 281/538 (52%)
Query: 44 KQRQR-LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+Q QR LP+ ++R + ++T I+ G+TG GK+TQ+PQYL + G+ R IACTQ
Sbjct: 140 RQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGY----RSIACTQ 195
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRRLA ++ R + IRFE K LT I F+T+G+LLR++ L
Sbjct: 196 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTK-LTNILFITEGLLLRQLAVAANL 254
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRR 222
+Y +++DE HER++ D LLG+ K + R R L+LI+ SATI + FH G
Sbjct: 255 DQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVE----LFHGYFGEE 310
Query: 223 GLEGVELVPRLEPAILS-VEGRGFNVQIHYVEEPVSDYVQ---AAVSTVLLIHDKEPP-- 276
G V++ RL P L + ++ S + A VL + D++ P
Sbjct: 311 GARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTS 370
Query: 277 --GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
GD+L+F++G ++I++ ++ + E A T + + ++LPL+SG + A+Q +VF P G
Sbjct: 371 ERGDVLIFVSGVNEIESVVEAVHEYA-TEQTH---WLVLPLHSGQAIADQSKVFDYAPEG 426
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RK ++STNIAETSLT++G+ +VVDSG K+ ++ + L +SK+S
Sbjct: 427 MRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRA 486
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
C+RLYT E + A PE+ R L + ++Q+ ++G+ ++ F + +P
Sbjct: 487 GRTGPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPET 545
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E + + + L L + K+T P G +A +P+E I KM+L + E+++T++A
Sbjct: 546 ERIEQTILALKQHCALSVEEKIT-PLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAA 604
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCK----SSHWCHK 568
+LS+Q+ + + + + GD T + +Y ++Q + WC +
Sbjct: 605 MLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRR 662
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 162/550 (29%), Positives = 282/550 (51%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACT 101
K+R+ LP++K + + + + + ++ G++ GK++Q+PQ+ E + + + CT
Sbjct: 64 KEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 123
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
Q + +A R Y I FE+ + T +++ TD +L REMM +P
Sbjct: 124 QVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE-TILRYCTDDMLQREMMSNPF 182
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L Y VI++D+ HERS++TD+LLGLLK + R +L+LII+ + +S+++ G
Sbjct: 183 LGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYY----GN 238
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
VP LE V + V++ Y+ D ++ V + IH GD++V
Sbjct: 239 --------VPLLE-----VRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVV 284
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR-------G 334
FL + DI+ T +++ +E + L+++PLY E+ +F P
Sbjct: 285 FLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLYP----KEKCSLFRPVDETEKRCQAS 340
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
+R+VV++T+ E+ + + +V+D G +++ YNP +LV+ PIS++
Sbjct: 341 QRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLL 400
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
K + LYTEE+ K++ EMQ +NL S V+ +K + I + D+ P P
Sbjct: 401 GSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAP 460
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E++++ALE L L LD+D L S G ++E PL+P +SK IL+S E C +E++TI+A
Sbjct: 461 ESLMQALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAA 519
Query: 515 VLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS---H----WC 566
+++ S ++ GA++ F EGDH T +NIY + + +S H WC
Sbjct: 520 MVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWC 579
Query: 567 HKNFINYHAM 576
H F++ A+
Sbjct: 580 HNCFLSCSAL 589
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 416 (151.5 bits), Expect = 2.7e-60, Sum P(2) = 2.7e-60
Identities = 108/306 (35%), Positives = 165/306 (53%)
Query: 249 IHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSS 308
I Y+ V DY + I D G ILVFL G +I+ + L R + +S
Sbjct: 856 IKYIASAVVDY-DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRF--RGAS 912
Query: 309 GLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFY 368
G +LPL+S ++ EQ++VF P+G RKV+I+TNIAETS+T+E +VYV+DSG K+ Y
Sbjct: 913 GDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRY 972
Query: 369 NPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNL 428
NP + ++V +SKA+ C+ LYT F K + +PEM R L
Sbjct: 973 NPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPL 1032
Query: 429 VSCVIQLKALGIDNILGFDWPA-SPPPEAMIR-ALEVLYSLGVLDDDAKLTSPTGFQVAE 486
V + +K LG+ I F A PP E+ I A+ +L+ +G L+ D +LT P G +A+
Sbjct: 1033 VELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELT-PLGHHLAK 1091
Query: 487 IPLEPMISKMILSSNELGCSEEIITISAVLSI-QSIWVSGRGAQKELDEAKLRFAAAEGD 545
+P++ +I KM+L GC I++I+A LS +S +V + Q +D KL + + +
Sbjct: 1092 LPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQN-VDRVKLALLSDKLE 1150
Query: 546 HVTFLN 551
+ LN
Sbjct: 1151 SSSNLN 1156
Score = 246 (91.7 bits), Expect = 2.7e-60, Sum P(2) = 2.7e-60
Identities = 65/182 (35%), Positives = 97/182 (53%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE--AGWADGGRV-IAC 100
K R LP+ + + IL ++ ++ GETGSGKTTQ+PQ++ + GG I C
Sbjct: 592 KTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIIC 651
Query: 101 TQPRRLAV-QAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPR + V Q VA Y +R ++ D T + F T G+LLR+++ D
Sbjct: 652 TQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQN-ARSDKTRLLFCTTGILLRKLVGD 710
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRS-D-----LRLIISSATIEAKSMSA 213
L + I+VDE HERS+ D LL +LK + +S D L++I+ SAT++A S
Sbjct: 711 TTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSR 770
Query: 214 FF 215
+F
Sbjct: 771 YF 772
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 363 (132.8 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 92/309 (29%), Positives = 159/309 (51%)
Query: 273 KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP 332
K G +L+FL G I LL+ + R + ++ L+S LS +Q F+ P
Sbjct: 861 KNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPP 917
Query: 333 RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXX 392
+G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV +SKAS
Sbjct: 918 QGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 977
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
C+R+YT E F + +PE+ R L + + + + F A
Sbjct: 978 RAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALD 1036
Query: 453 PPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP+ + A+ +L +G + ++ KLT P G +A +P+ I KM++ GC + +
Sbjct: 1037 PPQLQVISNAMNLLRKIGACELNEPKLT-PLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1095
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHW---- 565
T++AV++ +S +++ G + E D AK A A+ DH+T N Y G+ ++ + +
Sbjct: 1096 ATLAAVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEI 1155
Query: 566 --CHKNFIN 572
C KNF+N
Sbjct: 1156 AYCRKNFLN 1164
Score = 327 (120.2 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 71/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R++++ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++ + S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 42 (19.8 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ + +
Sbjct: 748 ILRISGRSYPVEVFHLEDIIEE 769
Score = 37 (18.1 bits), Expect = 7.6e-30, Sum P(3) = 7.6e-30
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 199 LIISSATIEAKSMSAFFHARKGRRG 223
L +++ ++AK +A F K ++G
Sbjct: 261 LHLAAKLLDAKEQAAAFKLEKNKQG 285
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 384 (140.2 bits), Expect = 4.9e-60, Sum P(3) = 4.9e-60
Identities = 98/314 (31%), Positives = 177/314 (56%)
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
I + E PG IL+FLTG DDI + + L + N +++L + + EQ +F
Sbjct: 492 ICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIFE 549
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
G RK+V++TNIAETS+T+ + +V+D G +K+ Y+ +++ L+ + ISK S
Sbjct: 550 EPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQ 609
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAE-GIPEMQRSNLVSCVIQLKALGIDNILGFDW 448
+CY LY + V + AE +PE+ R+ L S +Q+K+L + +I F
Sbjct: 610 RRGRAGRVRPGQCYHLYPK--CVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLS 667
Query: 449 PASPPPE--AMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCS 506
A PE A+ +A+ L +G LD++ LT+ G ++++P+EP + KM++ LGC
Sbjct: 668 RALQSPELLAVQKAIAFLKIIGALDENEDLTT-LGRYLSKLPMEPKLGKMLILGAILGCL 726
Query: 507 EEIITISAVLSIQSIWVSGRGAQKELDEA-KLRFAAAEGDHVTFLNIYKGFLQSCKSS-- 563
+ I+T++A LS++ +++ + +K+L EA K +F+ DH+ + Y+G+ ++ + S
Sbjct: 727 DPILTVAAGLSVRDPFLTPQD-KKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAV 785
Query: 564 -HWCHKNFINYHAM 576
+C KNF++ ++
Sbjct: 786 YDYCWKNFLSIQSL 799
Score = 293 (108.2 bits), Expect = 4.9e-60, Sum P(3) = 4.9e-60
Identities = 66/173 (38%), Positives = 101/173 (58%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW-ADGGRV--IACTQ 102
R LP +K R ++L + + +I GETG GKTTQIPQ++ E+ A+ G I CTQ
Sbjct: 217 RTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQ 276
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR++ +V+ R Y +R E +D T + F T G+LLR ++ D L
Sbjct: 277 PRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRD-TRLLFCTTGILLRRLLVDRNL 335
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER ++ D LL +LK + RS+L+LI+ SAT++A+ S++F
Sbjct: 336 RGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYF 388
Score = 38 (18.4 bits), Expect = 4.9e-60, Sum P(3) = 4.9e-60
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 3 QFWKPGAEKPRLLD 16
Q+W+ E R+LD
Sbjct: 202 QYWQASVEGQRMLD 215
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 402 (146.6 bits), Expect = 8.0e-60, Sum P(2) = 8.0e-60
Identities = 98/284 (34%), Positives = 155/284 (54%)
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
I D G IL+FL G +I + +L R + L LPL+S ++ +EQ +VF
Sbjct: 909 IDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPLHSSIASSEQRKVFL 966
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXX 389
P+G RKV+ +TNIAETS+T++ +VYV+DSG K+ YNP + ++V IS+A+
Sbjct: 967 RPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQ 1026
Query: 390 XXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
C+ LYT F K + +PEM R LV +Q+K LG+ +I F
Sbjct: 1027 RTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSR 1086
Query: 450 ASPPPE--AMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSE 507
A PP AM A+ +L+ +G ++ D +LT P G +A++P++ +I KM+L GC
Sbjct: 1087 ALEPPSEGAMTSAISLLHEVGAVEGDEELT-PLGHHLAKLPVDVLIGKMLLYGGIFGCLS 1145
Query: 508 EIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLN 551
I++I+A LS +S ++ + ++ +D KL + G + LN
Sbjct: 1146 PILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLN 1189
Score = 256 (95.2 bits), Expect = 8.0e-60, Sum P(2) = 8.0e-60
Identities = 67/185 (36%), Positives = 97/185 (52%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE--AGWADGGRV-IAC 100
K R LP+ + + IL ++ ++ GETGSGKTTQ+PQ++ + GG I C
Sbjct: 609 KTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIIC 668
Query: 101 TQPRRLAVQAVASRXXXXXXXXX----XXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
TQPRR+A +VA R Y +R E D T + F T G+LLR++
Sbjct: 669 TQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLES-ARSDKTRLLFCTTGILLRKL 727
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKI---QRCRSD---LRLIISSATIEAKS 210
D L + I+VDE HERS+ D LL +LK + Q C + L++I+ SAT++A
Sbjct: 728 AGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADL 787
Query: 211 MSAFF 215
S +F
Sbjct: 788 FSRYF 792
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 359 (131.4 bits), Expect = 8.7e-60, Sum P(3) = 8.7e-60
Identities = 95/321 (29%), Positives = 163/321 (50%)
Query: 266 TVLLIHDKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS 320
T L I D+ P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 852 TYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILS 908
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
+Q F+ P+G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
+SKAS C+R+YT E F + +PE+ R L + + +
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNL 1027
Query: 441 DNILGFDWPASPPPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMI 497
+ F A PP+ + A+ +L +G + ++ KLT P G +A +P+ I KM+
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLT-PLGQHLAALPVNVKIGKML 1086
Query: 498 LSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL 557
+ GC + + T++AV++ +S + + G + E D AK A A+ DH+T N Y G+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWK 1146
Query: 558 QSCKSSHW------CHKNFIN 572
++ + + C +NF+N
Sbjct: 1147 KAQQEGGYRSEIAYCRRNFLN 1167
Score = 330 (121.2 bits), Expect = 8.7e-60, Sum P(3) = 8.7e-60
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 42 (19.8 bits), Expect = 8.7e-60, Sum P(3) = 8.7e-60
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ + +
Sbjct: 748 ILRISGRSYPVEVFHLEDIIEE 769
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 359 (131.4 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 95/321 (29%), Positives = 163/321 (50%)
Query: 266 TVLLIHDKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS 320
T L I D+ P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 852 TYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILS 908
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
+Q F+ P+G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
+SKAS C+R+YT E F + +PE+ R L + + +
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNL 1027
Query: 441 DNILGFDWPASPPPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMI 497
+ F A PP+ + A+ +L +G + ++ KLT P G +A +P+ I KM+
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLT-PLGQHLAALPVNVKIGKML 1086
Query: 498 LSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL 557
+ GC + + T++AV++ +S + + G + E D AK A A+ DH+T N Y G+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWK 1146
Query: 558 QSCKSSHW------CHKNFIN 572
++ + + C +NF+N
Sbjct: 1147 KAQQEGGYRSEIAYCRRNFLN 1167
Score = 330 (121.2 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 42 (19.8 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ + +
Sbjct: 748 ILRISGRSYPVEVFHLEDIIEE 769
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 359 (131.4 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 95/321 (29%), Positives = 163/321 (50%)
Query: 266 TVLLIHDKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLS 320
T L I D+ P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 852 TYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILS 908
Query: 321 RAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 380
+Q F+ P+G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 381 PISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI 440
+SKAS C+R+YT E F + +PE+ R L + + +
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNL 1027
Query: 441 DNILGFDWPASPPPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMI 497
+ F A PP+ + A+ +L +G + ++ KLT P G +A +P+ I KM+
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLT-PLGQHLAALPVNVKIGKML 1086
Query: 498 LSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFL 557
+ GC + + T++AV++ +S + + G + E D AK A A+ DH+T N Y G+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWK 1146
Query: 558 QSCKSSHW------CHKNFIN 572
++ + + C +NF+N
Sbjct: 1147 KAQQEGGYRSEIAYCRRNFLN 1167
Score = 330 (121.2 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 42 (19.8 bits), Expect = 8.8e-60, Sum P(3) = 8.8e-60
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ + +
Sbjct: 748 ILRISGRSYPVEVFHLEDIIEE 769
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 363 (132.8 bits), Expect = 9.4e-60, Sum P(3) = 9.4e-60
Identities = 97/320 (30%), Positives = 163/320 (50%)
Query: 268 LLIH-DKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
LL++ DK P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 852 LLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQ---VIALHSVLST 908
Query: 322 AEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAP 381
+Q F P G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 909 QDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 968
Query: 382 ISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID 441
+SKAS C+RLYT E F + +PE+ R L + + +
Sbjct: 969 VSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYS-VPEILRVPLEELCLHIMKCDLG 1027
Query: 442 NILGFDWPASPPPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMIL 498
+ F A PP+ + A+ +L +G + ++ KLT P G +A +P+ I KM++
Sbjct: 1028 SPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLT-PLGQHLAALPVNVKIGKMLI 1086
Query: 499 SSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ 558
GC E + T++AV++ +S +++ G + E D AK A A+ DH+T N Y G+ +
Sbjct: 1087 FGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKK 1146
Query: 559 SCKSS------HWCHKNFIN 572
+ + +C +NF+N
Sbjct: 1147 AQQEGGFRSEISYCQRNFLN 1166
Score = 323 (118.8 bits), Expect = 9.4e-60, Sum P(3) = 9.4e-60
Identities = 73/181 (40%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD--GGRV--IA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E D G R I
Sbjct: 566 KERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIV 625
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXX-----XXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 626 CTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLR 684
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LL S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT+++ S +
Sbjct: 685 KLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTY 744
Query: 215 F 215
F
Sbjct: 745 F 745
Score = 43 (20.2 bits), Expect = 9.4e-60, Sum P(3) = 9.4e-60
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ V +
Sbjct: 750 ILRISGRSYPVEVFHLEDIVEE 771
Score = 40 (19.1 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 199 LIISSATIEAKSMSAFFHARKGRRGL-EGVELVPRLEPAILSVEGRG-FNVQI 249
L +++ ++AK +A F K ++G E E + + + + ++E FN I
Sbjct: 263 LNLAARLLDAKEQAAAFKLEKNKQGQKEAQEKIRKFQREMETLEDHPIFNPAI 315
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 379 (138.5 bits), Expect = 2.4e-59, Sum P(2) = 2.4e-59
Identities = 105/339 (30%), Positives = 168/339 (49%)
Query: 249 IHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSS 308
I +E+ D + V+ + I +E G ILVFL G D+I LL + S
Sbjct: 376 IEMMEDDKVD-LNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SD 431
Query: 309 GLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFY 368
+I+PL+S + Q QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ +
Sbjct: 432 KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 491
Query: 369 NPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNL 428
+ ++I + +SKA+ CY LY + +PE+ R+ L
Sbjct: 492 DTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPL 550
Query: 429 VSCVIQLKALGIDNILGFDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAE 486
+Q+K L + I F PP EA++ ++ L L LD +LT P G +A
Sbjct: 551 EELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLAR 609
Query: 487 IPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGD 545
+P+EP I KMIL C + ++TI+A LS + +V G +K D + A D
Sbjct: 610 LPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSD 669
Query: 546 HVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVRNLIWML 584
H+T +N ++G+ ++ + K++ + + N + ML
Sbjct: 670 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 708
Score = 291 (107.5 bits), Expect = 2.4e-59, Sum P(2) = 2.4e-59
Identities = 61/176 (34%), Positives = 102/176 (57%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVIACT 101
R++LP Y + ++ L++ H T+I GETG GKTTQ+ Q++ E G R++ CT
Sbjct: 118 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIV-CT 176
Query: 102 QPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
QPRR++ +VA R Y IR + + +I + T G++L+ + D
Sbjct: 177 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 236
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
P L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S +F
Sbjct: 237 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 292
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 363 (132.8 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 97/320 (30%), Positives = 162/320 (50%)
Query: 268 LLIH-DKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
LL++ DK P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 853 LLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQ---LIALHSVLST 909
Query: 322 AEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAP 381
+Q F P G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 910 QDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 969
Query: 382 ISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID 441
+SKAS C+RLYT E F + +PE+ R L + + +
Sbjct: 970 VSKASALQRQGRAGRVRDGFCFRLYTRERF-EGFLEYSVPEILRVPLEELCLHIMKCDLG 1028
Query: 442 NILGFDWPASPPPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMIL 498
+ F A PP+ + A+ +L +G + + KLT P G +A +P+ I KM++
Sbjct: 1029 SPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLT-PLGQHLAALPVNVKIGKMLI 1087
Query: 499 SSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ 558
GC E + T++AV++ +S +++ G + E D AK A A+ DH+T N Y G+ +
Sbjct: 1088 FGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKK 1147
Query: 559 SCKSS------HWCHKNFIN 572
+ + +C +NF+N
Sbjct: 1148 AQQEGGFRSEISYCQRNFLN 1167
Score = 319 (117.4 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWAD--GGRV--IA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E + G R I
Sbjct: 567 KERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIV 626
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 627 CTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLR 685
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LL S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT+++ S +
Sbjct: 686 KLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTY 745
Query: 215 F 215
F
Sbjct: 746 F 746
Score = 43 (20.2 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ V +
Sbjct: 751 ILRISGRSYPVEVFHLEDIVEE 772
Score = 39 (18.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRC 193
++Y ++E E +I+ G +KK Q C
Sbjct: 781 SEYCQKFLEEEEEITINVTSKAGGIKKYQEC 811
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 158/546 (28%), Positives = 278/546 (50%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACT 101
K+R+ LP++K + + + + I+ G+ GK++Q+PQ+ E + R + CT
Sbjct: 57 KEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVCT 116
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
Q + +A R Y I FE+ + T +++ TD +L REMM +P
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSE-TILRYCTDDMLQREMMSNPF 175
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L Y VI++D+ HERS++TD+LLGLLK + R +L+LII+S+ +S+++ G
Sbjct: 176 LGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYY----GN 231
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
VP ++ V+ + V+ Y+ + ++ + + IH GDI+V
Sbjct: 232 --------VP-----LIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVV 277
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRA---EQEQVFSPTPRGKRKV 338
FL + DI+ +++ +E + L+++PLY A ++ P +R+V
Sbjct: 278 FLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPNDETEKRCPVYQRRV 337
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
V++ + E+ + + +V+D G +++ YNP ++LV PIS++
Sbjct: 338 VLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASP 397
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
K + LY+EE+ +++ EMQ +NL S V+ +K + I + D+ P PE+++
Sbjct: 398 SGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLM 457
Query: 459 RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
+ALE L L LD+D L S G ++E PL+P +SK IL+S E C +E++TI+A+++
Sbjct: 458 QALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTA 516
Query: 519 QSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ---SCKSSH----WCHKNF 570
+ + RGA++ F +GDH T +NIYK + + S H WCH F
Sbjct: 517 PNCFSHLPRGAEEAALSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYF 576
Query: 571 INYHAM 576
+N A+
Sbjct: 577 LNCSAL 582
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 388 (141.6 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 105/335 (31%), Positives = 171/335 (51%)
Query: 253 EEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLII 312
+E V + AA+ +++ +++ G ILVFL G D+I LL + S II
Sbjct: 469 DEKVDLNLIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFK---SDKFII 523
Query: 313 LPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 372
+PL+S + Q QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ +
Sbjct: 524 IPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 583
Query: 373 DIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCV 432
+I + +SKA+ CY LY + +PE+ R+ L
Sbjct: 584 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNS-LRASLLDDYQLPEILRTPLEELC 642
Query: 433 IQLKALGIDNILGFDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLE 490
+Q+K L + I F PP EA++ +++ L L LD +LT P G +A +P+E
Sbjct: 643 LQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELT-PLGVHLARLPVE 701
Query: 491 PMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTF 549
P I KMIL C + ++TI+A LS + +V G +K D + A + DH+T
Sbjct: 702 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTV 761
Query: 550 LNIYKGFLQSCKSSHWCHKNFINYHAMVRNLIWML 584
+N +KG+ ++ + K++ + + N + ML
Sbjct: 762 VNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQML 796
Score = 280 (103.6 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 58/179 (32%), Positives = 103/179 (57%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVI 98
++ R++LP Y + ++ +++ H T+I GETG GKTTQ+ Q++ E G R++
Sbjct: 203 QRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIV 262
Query: 99 ACTQPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
CTQPRR++ +VA R Y IR + + +I + T G++L+ +
Sbjct: 263 -CTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 321
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
DP L+ S I++DE HER++ +D+L+ ++K + R DL++++ SAT+ A+ S +F
Sbjct: 322 QSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYF 380
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 379 (138.5 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
Identities = 105/339 (30%), Positives = 168/339 (49%)
Query: 249 IHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSS 308
I +E+ D + V+ + I +E G ILVFL G D+I LL + S
Sbjct: 462 IEMMEDDKVD-LNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SD 517
Query: 309 GLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFY 368
+I+PL+S + Q QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ +
Sbjct: 518 KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 577
Query: 369 NPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNL 428
+ ++I + +SKA+ CY LY + +PE+ R+ L
Sbjct: 578 DTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPL 636
Query: 429 VSCVIQLKALGIDNILGFDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAE 486
+Q+K L + I F PP EA++ ++ L L LD +LT P G +A
Sbjct: 637 EELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLAR 695
Query: 487 IPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGD 545
+P+EP I KMIL C + ++TI+A LS + +V G +K D + A D
Sbjct: 696 LPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSD 755
Query: 546 HVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVRNLIWML 584
H+T +N ++G+ ++ + K++ + + N + ML
Sbjct: 756 HLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 794
Score = 291 (107.5 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
Identities = 61/176 (34%), Positives = 102/176 (57%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVIACT 101
R++LP Y + ++ L++ H T+I GETG GKTTQ+ Q++ E G R++ CT
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIV-CT 262
Query: 102 QPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
QPRR++ +VA R Y IR + + +I + T G++L+ + D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
P L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S +F
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 162/550 (29%), Positives = 281/550 (51%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACT 101
K+R+ LP++K + + + + + I+ G+ GK++Q+PQ+ E + + + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCT 116
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
Q + +A R Y I FE+ + + T +++ TD +L REMM P
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSE-TILRYCTDDMLQREMMSSPF 175
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L Y VI++D+ HERSI+TD+LLGLLK + R +L+LII+S+ +S+++ G
Sbjct: 176 LGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYY----GN 231
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
VP +E V+ + V++ Y+ + +++ + + IH GDI+V
Sbjct: 232 --------VPLIE-----VK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVV 277
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK------ 335
FL + DI+ +++ +E + L+++PLY E+ +F P +
Sbjct: 278 FLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLYP----KEKCALFKPNDETEKRCQVY 333
Query: 336 -RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
R+VV++ + E+ + + +V+D G +++ YNP +LV PIS++
Sbjct: 334 QRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQIL 393
Query: 395 XXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
K + LY+EE+ K++ EMQ +NL S V+ +K + I + D+ P P
Sbjct: 394 GSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAP 453
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
E++++ALE L L LD+D L S G ++E PL+P +SK IL+S E C EE++TI+A
Sbjct: 454 ESLMQALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAA 512
Query: 515 VLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ---SCKSSH----WC 566
+++ + + + GA++ F EGDH T +NIYK + + S H WC
Sbjct: 513 MVTAPNCFSNLPHGAEEAALTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWC 572
Query: 567 HKNFINYHAM 576
H F+N A+
Sbjct: 573 HDYFLNCCAL 582
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 350 (128.3 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 92/319 (28%), Positives = 160/319 (50%)
Query: 268 LLIH-DKEPP-----GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
LLI+ D+ P G +L+FL G I LL+ + R + ++ L+S LS
Sbjct: 850 LLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILST 906
Query: 322 AEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAP 381
+Q F+ P G RK+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV
Sbjct: 907 QDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 966
Query: 382 ISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID 441
+SKAS C+R+YT E F + +PE+ R L + + +
Sbjct: 967 VSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLG 1025
Query: 442 NILGFDWPASPPPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILS 499
+ F A PP+ + A+ +L +G + + +P G +A +P+ I KM++
Sbjct: 1026 SPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIF 1085
Query: 500 SNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
GC + + T++AV++ +S + + G + E D AK A A+ DH+T N Y G+ ++
Sbjct: 1086 GAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKA 1145
Query: 560 CKSSHW------CHKNFIN 572
+ + C +NF+N
Sbjct: 1146 RQEGGYRSEIAYCRRNFLN 1164
Score = 330 (121.2 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 43 (20.2 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ V +
Sbjct: 748 ILRISGRSYPVEVFHLEDIVEE 769
Score = 40 (19.1 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 199 LIISSATIEAKSMSAFFHARKGRRGL-EGVELVPRLEPAILSVEGRG-FNVQI 249
L +++ ++AK +A F K ++G E E + + + + ++E FN I
Sbjct: 262 LHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQREMETLEDHPVFNPAI 314
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 352 (129.0 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 93/309 (30%), Positives = 156/309 (50%)
Query: 273 KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP 332
K G +L+FL G I L++ + R S + LI L +S LS +Q F+ P
Sbjct: 865 KNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIAL--HSVLSTQDQAAAFTVPP 922
Query: 333 RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXX 392
G RK+V++TNIAET +T+ +V+V+DSG +K+ Y+ S + +L +SKAS
Sbjct: 923 LGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQG 982
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
C+R+YT + F + +PE+ R L + + + + F A
Sbjct: 983 RAGRVRDGFCFRMYTRDRF-ESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALD 1041
Query: 453 PPEAMI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP+ + A+ +L +G ++ KLT P G +A +P+ I KM++ GC + +
Sbjct: 1042 PPQPQVIGNAMNLLRKIGACQLNEPKLT-PLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1100
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS-H---- 564
T++AV++ +S + + G + E D AK A A DH+T N Y G+ ++ + H
Sbjct: 1101 ATLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEM 1160
Query: 565 -WCHKNFIN 572
+C +NF+N
Sbjct: 1161 TYCRRNFLN 1169
Score = 328 (120.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 73/180 (40%), Positives = 110/180 (61%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV---IAC 100
K+RQ LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E D G I C
Sbjct: 569 KERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVC 628
Query: 101 TQPRRLAVQAVASRXXXXXXXXXX-----XXXXYTIRFEDFTNKDLTAIKFLTDGVLLRE 155
TQPRR++ ++A+R Y IR E T + T + + T GVLLR+
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTG-EATRLLYCTTGVLLRK 687
Query: 156 MMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ +D LL+ S ++VDE HERS+ +D LL +LK+I RSDL LI+ SAT++++ S++F
Sbjct: 688 LQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYF 747
Score = 60 (26.2 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
IL + GR + V++ +VE D ++A + +L D E FL +++I I +
Sbjct: 752 ILRISGRSYPVEVFHVE----DVIEA--TGYVLEKDSEY---CQKFLEEEEEI--MINVT 800
Query: 297 TEEARTSK-------KNSSGLIILPLYSGLSRAEQEQVFSPTP 332
T+ T+K ++ SG+ + P Y S Q+ VF P
Sbjct: 801 TKGGGTTKYQEYVPVQSGSGIDLSPYYQKYSSRTQQAVFYMNP 843
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 348 (127.6 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 87/304 (28%), Positives = 153/304 (50%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
G +L+FL G I LL+ + R + ++ L+S LS +Q F+ P G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV +SKAS
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
C+R+YT E F + +PE+ R L + + + + F A PP+
Sbjct: 985 VRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 457 MI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
+ A+ +L +G + + +P G +A +P+ I KM++ GC + + T++A
Sbjct: 1044 QVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAA 1103
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHW------CHK 568
V++ +S + + G + E D AK A A+ DH+T N Y G+ ++ + + C +
Sbjct: 1104 VMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRR 1163
Query: 569 NFIN 572
NF+N
Sbjct: 1164 NFLN 1167
Score = 330 (121.2 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 72/181 (39%), Positives = 110/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 564 KERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV 623
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E ++ T + + T GVLLR
Sbjct: 624 CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASES-TRLLYCTTGVLLR 682
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LLT S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 683 KLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 742
Query: 215 F 215
F
Sbjct: 743 F 743
Score = 43 (20.2 bits), Expect = 2.2e-58, Sum P(3) = 2.2e-58
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ V +
Sbjct: 748 ILRISGRSYPVEVFHLEDIVEE 769
Score = 40 (19.1 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 199 LIISSATIEAKSMSAFFHARKGRRGL-EGVELVPRLEPAILSVEGRG-FNVQI 249
L +++ ++AK +A F K ++G E E + + + + ++E FN I
Sbjct: 262 LHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQREMETLEDHPVFNPAI 314
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 163/552 (29%), Positives = 281/552 (50%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA---DGGRVIAC 100
K+R+ LP++K + + + + I+ G+ GK++Q+PQ+ E + G V+ C
Sbjct: 57 KEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVV-C 115
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQ + +A R Y I FE+ + T +++ TD +L REMM +P
Sbjct: 116 TQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSE-TILRYCTDDMLQREMMSNP 174
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L Y VI++D+ ERSI+TD+LLGLLK + R +L+LII+S+ ++S+++ G
Sbjct: 175 FLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYY----G 230
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
VP +E + S V++ Y+ + ++A + + IH GDI+
Sbjct: 231 N--------VPLIE--VTSKRP----VEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIV 276
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK----- 335
VFL + DI+ +++ +E + L+++PLY E+ +F P +
Sbjct: 277 VFLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLYP----KEKCALFKPNDEAEKRCQV 332
Query: 336 --RKVVISTNIAETSLTLEGIVYVVDSGFSKQR-FYNPISDIENLVVAPISKASXXXXXX 392
R+VV++ + E+ + + +V+D G +++ Y+P ++LV+ PIS++
Sbjct: 333 YQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQ 392
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
K + LY+EE+ K++ EMQ +NL S V+ +K + I + D+ P
Sbjct: 393 VLGSSSSGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRP 452
Query: 453 PPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITI 512
PE++++ALE L L LD+D L S G ++E PL+P +SK IL+S E C +E++TI
Sbjct: 453 APESLMQALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTI 511
Query: 513 SAVLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ---SCKSSH---- 564
+A+++ + + GA+ E F EGDH T +N+YK F + S H
Sbjct: 512 AAMVTAPNCFSHLPSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEK 571
Query: 565 WCHKNFINYHAM 576
WCH F+N A+
Sbjct: 572 WCHDYFLNCSAL 583
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 353 (129.3 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 90/305 (29%), Positives = 156/305 (51%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
G +L+FL G I LL+ + R + ++ L+S LS +Q F+ P G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+V++TNIAET +T+ +V+V+D+G +K+ Y+ S + +LV +SKAS
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
C+R+YT E F + +PE+ R L + + + + F A PP+
Sbjct: 985 VRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 457 MI--RALEVLYSLGVLD-DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+ A+ +L +G + ++ KLT P G +A +P+ I KM++ GC + + T++
Sbjct: 1044 QVISNAMNLLRKIGACELNEPKLT-PLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHW------CH 567
AV++ +S + + G + E D AK A A+ DH+T N Y G+ ++ + + C
Sbjct: 1103 AVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCR 1162
Query: 568 KNFIN 572
+NF+N
Sbjct: 1163 RNFLN 1167
Score = 319 (117.4 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 71/181 (39%), Positives = 109/181 (60%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA----GWADGGRVIA 99
K+RQ+LPV+K+R +I+ ++ H ++ GETGSGK+TQ+P +L E W I
Sbjct: 567 KERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIV 626
Query: 100 CTQPRRLAVQAVASRXXXXXX-----XXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
CTQPRR++ ++A+R Y IR E + T + + T GVLLR
Sbjct: 627 CTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACES-TRLLYCTTGVLLR 685
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ +D LL+ S ++VDE HERS+ +D LL +LK+I + RSDL LI+ SAT++++ S +
Sbjct: 686 KLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTY 745
Query: 215 F 215
F
Sbjct: 746 F 746
Score = 42 (19.8 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSD 258
IL + GR + V++ ++E+ + +
Sbjct: 751 ILRISGRSYPVEVFHLEDIIEE 772
Score = 39 (18.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 199 LIISSATIEAKSMSAFFHARKGRRGL-EGVELVPRLEPAILSVE 241
L +++ ++AK +A F K ++G E E + + + + ++E
Sbjct: 265 LHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQREMETLE 308
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 379 (138.5 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 100/315 (31%), Positives = 159/315 (50%)
Query: 273 KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP 332
+E G ILVFL G D+I LL + S +I+PL+S + Q QVF TP
Sbjct: 477 EEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SDRFLIIPLHSLMPTVNQTQVFKKTP 533
Query: 333 RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXX 392
G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA+
Sbjct: 534 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 593
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
CY LY + +PE+ R+ L +Q+K L + I F
Sbjct: 594 RAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMD 652
Query: 453 PP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
PP EA++ +++ L L LD +LT P G +A +P+EP I KMIL C + ++
Sbjct: 653 PPSDEAVVLSIKHLMELSALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFCCLDPVL 711
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
TI+A LS + +V G +K D + A DH+T +N ++G+ ++ + K+
Sbjct: 712 TIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKD 771
Query: 570 FINYHAMVRNLIWML 584
+ + + N + ML
Sbjct: 772 YCWEYFLSSNTLQML 786
Score = 280 (103.6 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 60/179 (33%), Positives = 102/179 (56%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVI 98
++ R++LP Y + ++ L+ H T+I GETG GKTTQ+ Q++ E G R++
Sbjct: 193 QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIV 252
Query: 99 ACTQPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
CTQPRR++ +VA R Y IR + + +I + T G++L+ +
Sbjct: 253 -CTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 311
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
D L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S +F
Sbjct: 312 QSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 370
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 379 (138.5 bits), Expect = 1.0e-57, Sum P(2) = 1.0e-57
Identities = 100/315 (31%), Positives = 159/315 (50%)
Query: 273 KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP 332
+E G ILVFL G D+I LL + S +I+PL+S + Q QVF TP
Sbjct: 478 EEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SDKFLIIPLHSLMPTVNQTQVFKKTP 534
Query: 333 RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXX 392
G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA+
Sbjct: 535 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 594
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP 452
CY LY + +PE+ R+ L +Q+K L + I F
Sbjct: 595 RAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMD 653
Query: 453 PP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
PP EA++ +++ L L LD +LT P G +A +P+EP I KMIL C + ++
Sbjct: 654 PPSNEAVVLSIKHLMELSALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFCCLDPVL 712
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
TI+A LS + +V G +K D + A DH+T +N ++G+ ++ + K+
Sbjct: 713 TIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKD 772
Query: 570 FINYHAMVRNLIWML 584
+ + + N + ML
Sbjct: 773 YCWEYFLSSNTLQML 787
Score = 280 (103.6 bits), Expect = 1.0e-57, Sum P(2) = 1.0e-57
Identities = 60/179 (33%), Positives = 102/179 (56%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVI 98
++ R++LP Y + ++ L+ H T+I GETG GKTTQ+ Q++ E G R++
Sbjct: 194 QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIV 253
Query: 99 ACTQPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
CTQPRR++ +VA R Y IR + + +I + T G++L+ +
Sbjct: 254 -CTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 312
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
D L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S +F
Sbjct: 313 QSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 371
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 382 (139.5 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 108/342 (31%), Positives = 170/342 (49%)
Query: 258 DYVQAAVSTVLLIHD--KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPL 315
D + ++ L+ H E G ILVFL G D+I LL + + K II+PL
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSD-QMFKSGRYRFIIIPL 540
Query: 316 YSGLSRAEQEQV-------FSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFY 368
+S + Q QV F P G RK+VI+TNIAETS+T++ +VYV+D G K+ +
Sbjct: 541 HSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 600
Query: 369 NPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNL 428
+ ++I + +S A+ KCY LY + +PE+QR+ L
Sbjct: 601 DTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNG-LRASLLDNYQLPEIQRTPL 659
Query: 429 VSCVIQLKALGIDNILGFDWPASPPPE--AMIRALEVLYSLGVLDDDAKLTSPTGFQVAE 486
+Q+K L + I F PP A+ A+ L L LD D KLT P GF +A
Sbjct: 660 EELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLT-PLGFHLAR 718
Query: 487 IPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGD 545
+P+EP I KMIL LGC + ++TI+A LS + + G +K D+ + F+ + D
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSD 778
Query: 546 HVTFLNIYKGFLQSCKSS-----HWCHKNFINYHA--MVRNL 580
H++ +N + G+ + + +C NF++ + M++N+
Sbjct: 779 HLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNM 820
Score = 266 (98.7 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 58/178 (32%), Positives = 101/178 (56%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG-GRV--IAC 100
K R++LP Y R ++ L+ + +I GETG GKTTQ+ Q++ + G G + + C
Sbjct: 215 KFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVC 274
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXX--YTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
TQPRR++ +VA R Y IR + + ++ + T GV+L+ +
Sbjct: 275 TQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHS 334
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
DP L+ + +++DE HERS+ +DIL+ ++K + R DL++++ SAT+ A+ S +F+
Sbjct: 335 DPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFN 392
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 558 (201.5 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 151/483 (31%), Positives = 247/483 (51%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R LP++K R+ ++ ++ + II+G+TG GKTTQIPQ++ E D G C
Sbjct: 712 QKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIE-DMIDSGHAPYCNIV 770
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++V A R Y IRF++ + + T G+LL+ M D
Sbjct: 771 MTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSD 830
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
L S + +DE HER I TD LL +LKK+ ++LR+I+ SAT++ +SA+F
Sbjct: 831 MKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTCP 890
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH-----DKE 274
+ L + + E + + + + I Y +E SD V + L++H
Sbjct: 891 VIK-LTSYHHIAQ-EYFLEDISKQLNDPTISYRDEQ-SDDVDHEMILQLIVHIVTKVSST 947
Query: 275 PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
IL+FL G +DI T +L+ +N + +ILPL+S +S Q +VF P
Sbjct: 948 SEDSILIFLPGWEDISQTRELMRRHPML--RNENEFLILPLHSSVSMQLQAKVFEKPPPK 1005
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXX 394
RK+V+STNIAETS+T+ +VYV+DS K +++ D+ K+S
Sbjct: 1006 IRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRA 1065
Query: 395 XXXXXXK-CYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPP 453
CY + + + + + + EM+R L +Q+K L + +++GF A P
Sbjct: 1066 GRVRKDGVCYHMVSRDRY-NTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEP 1124
Query: 454 PE--AMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
PE ++ A+ +L LG L+ + +LT P G Q++ IP++P I KMI+ + C + I+T
Sbjct: 1125 PETKSIDNAINLLIDLGALNANQELT-PLGLQLSFIPVDPRIGKMIILGSYFRCLDPILT 1183
Query: 512 ISA 514
I++
Sbjct: 1184 IAS 1186
Score = 67 (28.6 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 529 QKELDEAKLRFAAAEGDHVTFLNIYKGFLQS 559
Q++ + K + + DH++FLNI+ G+LQS
Sbjct: 1222 QQQPQQPKNLYPELQSDHLSFLNIFNGWLQS 1252
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 376 (137.4 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 104/332 (31%), Positives = 165/332 (49%)
Query: 258 DYVQAAVSTVLLIHD--KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPL 315
D V + L+ H +E G ILVFL G D+I LL + S +I+PL
Sbjct: 582 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SDRFLIIPL 638
Query: 316 YSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIE 375
+S + Q QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ ++I
Sbjct: 639 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 698
Query: 376 NLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQL 435
+ +SKA+ CY LY + +PE+ R+ L +Q+
Sbjct: 699 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQI 757
Query: 436 KALGIDNILGFDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMI 493
K L + I F PP EA+ +++ L L LD +LT P G +A +P+EP I
Sbjct: 758 KILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELT-PLGVHLARLPVEPHI 816
Query: 494 SKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNI 552
KMIL C + ++TI+A LS + +V G +K D + A + DH+T +N
Sbjct: 817 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNA 876
Query: 553 YKGFLQSCKSSHWCHKNFINYHAMVRNLIWML 584
++G+ ++ + K++ + + N + ML
Sbjct: 877 FEGWEEARRRGFRYEKDYCWEYFLSSNTLQML 908
Score = 274 (101.5 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 58/176 (32%), Positives = 100/176 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVIACT 101
R++LP Y + ++ +++ H T+I GETG GKTTQ+ Q++ E G R++ CT
Sbjct: 318 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIV-CT 376
Query: 102 QPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
QPRR++ +VA R Y IR + + +I + T G++L+ + D
Sbjct: 377 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 436
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L+ S I++DE HER++ +D+L+ ++K + R DL++I+ SAT+ A+ S +F
Sbjct: 437 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 492
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 168/542 (30%), Positives = 272/542 (50%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIV--GETGSGKTTQIPQYLKEAGWADGGRV--IA 99
+QR+ LP++ R L +E+ T +++ G+ GSGK+TQIPQ+ E A G + +
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQVT 96
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQP LA ++ASR Y+I ED T + T ++F D + L+E+
Sbjct: 97 VTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN-TMLRFCWDRLFLQEVAST 155
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLK--KIQRCRSDLRLIISSATIEAKSMSAFFHA 217
+SV+++DEA ERS+++D+L GLL+ +++ D R+++ + AF+
Sbjct: 156 RGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFW-- 213
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVL-LIHDKEPP 276
G + VPR EP G + + Y + +D V+AA VL L +E P
Sbjct: 214 -----GNSPIVRVPR-EP--------GGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAP 259
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
GD+LV+L +++I + L+ E T +LPL+ G ++A Q V+ T R
Sbjct: 260 GDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVR 318
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+V++ +A+ S +L I +V+DSG + YNP E+ V+ PISK
Sbjct: 319 KIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKG 378
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
C RLY++ E P P++ NL S V+ L I + P PEA
Sbjct: 379 FPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEA 438
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
++RALE L L L+DD +L S G ++E PL P ++K +L+S E C +E++T++A+L
Sbjct: 439 LMRALEDLDYLAALNDDGEL-SDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAML 497
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAA--AEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+ + EA LR A A+GDH + + +Y+ F+QS WC +N+
Sbjct: 498 TAAPGFTR---PPLSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWE 554
Query: 575 AM 576
++
Sbjct: 555 SL 556
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 341 (125.1 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 70/173 (40%), Positives = 105/173 (60%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQ 102
+++R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +ACTQ
Sbjct: 156 QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQ 211
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A ++A R Y IRFE T T I FLT G+LLR++ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQIQREPSL 270
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F
Sbjct: 271 PQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYF 323
Score = 301 (111.0 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 73/203 (35%), Positives = 114/203 (56%)
Query: 327 VFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKAS 386
VF P G RK ++STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 387 XXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGF 446
C+RLY E + P +PE++R L S V+Q+K++ + + F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYP-VPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 447 DWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCS 506
+ PPP ++ A+ L G LD LT P G +A++P++ +I KM++ +
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFSLV 517
Query: 507 EEIITISAVLSIQSIWVSGRGAQ 529
E ++TI+A LS+QS + R AQ
Sbjct: 518 EPVLTIAAALSVQSPFT--RSAQ 538
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 378 (138.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 102/330 (30%), Positives = 165/330 (50%)
Query: 258 DYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYS 317
D + A + ++L +E G ILVFL G D+I LL + S II+PL+S
Sbjct: 454 DLIAALIRHIVL---EEEDGAILVFLPGWDNISTLHDLLMSQVMFK---SDRFIIIPLHS 507
Query: 318 GLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENL 377
+ Q QVF TP G RK+VI+TNIAETS+T++ +V+V+D G K+ ++ ++I +
Sbjct: 508 LMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTM 567
Query: 378 VVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA 437
+SKA+ CY LY + +PE+ R+ L +Q+K
Sbjct: 568 AAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKI 626
Query: 438 LGIDNILGFDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISK 495
L + I F PP +A++ A+ L L LD +LT P G +A +P+EP I K
Sbjct: 627 LKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELT-PLGVHLARLPVEPHIGK 685
Query: 496 MILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYK 554
MIL C + ++TI+A LS + +V G +K D + + + DH+T +N +
Sbjct: 686 MILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFT 745
Query: 555 GFLQSCKSSHWCHKNFINYHAMVRNLIWML 584
G+ ++ + K++ + + N + ML
Sbjct: 746 GWEETRRRGFRTEKDYCWEYFLSPNTLQML 775
Score = 261 (96.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 57/181 (31%), Positives = 102/181 (56%)
Query: 43 EKQRQRLPVY--KYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGR 96
++ R++LP Y + + ++ L+ + T+I GETG GKTTQ+ Q++ E G R
Sbjct: 180 QRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCR 239
Query: 97 VIACTQPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLR 154
++ CTQPRR++ +VA R Y IR + + +I + T G++L+
Sbjct: 240 IV-CTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQ 298
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
+ D L+ S +++DE HER++ +D+L+ ++K + R DL++I+ SAT+ A+ S +
Sbjct: 299 WLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEY 358
Query: 215 F 215
F
Sbjct: 359 F 359
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 169/542 (31%), Positives = 268/542 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIV--GETGSGKTTQIPQYLKEAGWADGGRV--IA 99
+QR+ LP++ R L +E+ T +++ GE GSGK+TQIPQ+ E A G + +
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQVT 96
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQP LA ++ASR Y+I ED T + T ++F D + L+E+
Sbjct: 97 VTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN-TMLRFCWDRLFLQEVAST 155
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLK--KIQRCRSDLRLIISSATIEAKSMSAFFHA 217
+SV+++DEA ERS+++D+L GLL+ +++ D R++I + + AF+
Sbjct: 156 RGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEPKFQAFW-- 213
Query: 218 RKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVL-LIHDKEPP 276
G VPR EP G N + Y + +D V+AA VL L +E P
Sbjct: 214 -----GNSPTVHVPR-EP--------GENPTLTYKDTVPADLVEAACQAVLELCQREEAP 259
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
GD+LV+L +++I + L+ E +LPL+ G +A Q V+ T R
Sbjct: 260 GDVLVYLPSEEEISLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVR 318
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+V++ +A+ S +L I +V+DSG + YNP E+ V+ ISK
Sbjct: 319 KIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARG 378
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA 456
C RLY++ E P P++ NL S V+ LK I + P PEA
Sbjct: 379 FPPGTCLRLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEA 438
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
+++ALE L L LDDD L S G ++E PL P ++K +L+S E C +E++T++A+L
Sbjct: 439 LMQALEDLDYLAALDDDGDL-SDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAML 497
Query: 517 SIQSIWVSGRGAQKELDEAKLR--FAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYH 574
+ + EA LR A+GDH + + +Y+ F+QS WC +++
Sbjct: 498 TAAPGFTRPPLCA---GEAALRRGLEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWE 554
Query: 575 AM 576
A+
Sbjct: 555 AL 556
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 351 (128.6 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 93/308 (30%), Positives = 168/308 (54%)
Query: 273 KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP 332
KE PG +LVFLTG DDI + + N +++L + ++ AEQ +F P
Sbjct: 536 KERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNR--VLLLMCHGSMATAEQRLIFERAP 593
Query: 333 RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXX 392
RK+V++TN+AE S+T+ +V+VVD G +K+ Y+ +++ L+ + IS+AS
Sbjct: 594 PNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRG 653
Query: 393 XXXXXXXXKCYRLYTEEYFVKEIPAE-GIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 451
+CY LY + V + AE +PE+ R+ L S +Q+K+L +++I F A
Sbjct: 654 RAGRLFPGECYHLYPK--CVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAAL 711
Query: 452 PPPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PE++ A+ L +G LD+ LT G ++ +P++P + KM++ C + I
Sbjct: 712 QAPESLAVQNAIGFLKMIGALDEKENLTD-LGKLLSILPVDPKLGKMLIMGAIFRCFDPI 770
Query: 510 ITISAVLSIQSIWVSGRGAQKELD-EAKLRFAAAE-GDHVTFLNIYKGFLQSCKSS---H 564
+TI + LS++ ++ + +K+L AKLRF+A + DH+ + ++G+ + +
Sbjct: 771 LTIVSGLSVRDPFLLPQD-KKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYE 829
Query: 565 WCHKNFIN 572
+C +NF++
Sbjct: 830 FCWRNFLS 837
Score = 281 (104.0 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 62/173 (35%), Positives = 97/173 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG-GRV--IACTQ 102
R+ LP +K + +L + + ++ GETG GKTTQ+PQY+ E+ G G I CTQ
Sbjct: 257 RKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQ 316
Query: 103 PRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR++ AV+ R + +R E K+ T + F T G+LLR ++ D L
Sbjct: 317 PRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKN-THLLFCTSGILLRRLLSDRNL 375
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ + VDE HER ++ D L+ +LK++ R DLRL++ SAT+ A+ S ++
Sbjct: 376 NGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYY 428
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 337 (123.7 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 94/312 (30%), Positives = 157/312 (50%)
Query: 277 GDILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
G IL+FL G D+I +++ ++ R S + L+S + +Q+ V P G
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGI 592
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK+++STNIAETS+T+ +V+V+DSG K++ ++ +S + L ISKAS
Sbjct: 593 RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAG 652
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILGFDWPASPP 453
C+ L++ F + + PE++R L + K L N ++ F A P
Sbjct: 653 RCRPGVCFHLFSRLRFQNMLEFQ-TPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDP 711
Query: 454 PEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P A+I A+++L + +D LT G+ +AE+P+EP + KM+L + L C + I+T
Sbjct: 712 PPALIVRNAIQMLKKIDAMDVWEDLTE-LGYHLAELPVEPHLGKMVLCAVVLKCLDPILT 770
Query: 512 ISAVLSIQSIWVSGRGA-QKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSCKSSHW--- 565
I+ L+ + +V A QK + R AA DH+ L ++ + Q +S W
Sbjct: 771 IACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAW-QKARSDGWERV 829
Query: 566 -CHKNFINYHAM 576
C KNF++ M
Sbjct: 830 FCEKNFLSQATM 841
Score = 296 (109.3 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 71/172 (41%), Positives = 103/172 (59%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPR 159
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLAV AVA R Y IR E + T + F T+G+LLR +M D L+
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPR-TLLTFCTNGILLRTLMAGDSALS 218
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ I + +++L+LIISSA ++A +F
Sbjct: 219 TVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYF 270
Score = 41 (19.5 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ SC S W HK+ I+ A V + I
Sbjct: 379 MDSCLSDIWLHKD-IDSFAQVFHFI 402
Score = 37 (18.1 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 319 LSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
L ++Q+ ++S TP ++K ++ E+SL +++ V Q F S+I
Sbjct: 1208 LDISQQKGIWSTTPSNEQK--LNRAFWESSLVY--LIFSVQGSGHFQGFARMSSEI 1259
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 340 (124.7 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 94/312 (30%), Positives = 163/312 (52%)
Query: 277 GDILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
G IL+FL G D+I ++L ++ R + N+ + L+S + ++Q++V P G
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAD-NTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 680
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK+++STNIAETS+T+ +V+V+DSG K++ ++ ++ + L + ISKAS
Sbjct: 681 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAG 740
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILGFDWPASPP 453
C+RL++ F + + PE+ R L + K L N I F A P
Sbjct: 741 RCRPGICFRLFSRLRFQNMLEFQ-TPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEP 799
Query: 454 PEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P A+I A+++L ++ +D LT G+ +A++P+EP + KM+L + L C + I+T
Sbjct: 800 PPALIVRNAVQMLKTIDAMDAWEDLTE-LGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 858
Query: 512 ISAVLSIQSIWV-SGRGAQKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSCKSSHW--- 565
I+ L+ + +V + +QK + RF A DH+ L ++ + Q +S W
Sbjct: 859 IACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAW-QKARSDGWERA 917
Query: 566 -CHKNFINYHAM 576
C KNF++ M
Sbjct: 918 FCEKNFLSQATM 929
Score = 280 (103.6 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 68/172 (39%), Positives = 98/172 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLA AVA R Y IR E + T + F T+GVLLR +M D L+
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLS 307
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ + + L+LI+SSA ++ +F
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 41 (19.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ +C S W HK+ ++ A V +LI
Sbjct: 468 MDACLSDIWLHKD-VDAFAQVFHLI 491
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 343 (125.8 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 96/320 (30%), Positives = 167/320 (52%)
Query: 269 LIHDKEPPGDILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQV 327
+ H E G IL+FL G D+I ++L ++ R ++ N+ + L+S + ++Q++V
Sbjct: 615 ICHSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAE-NAHRYQVFMLHSNMQTSDQKKV 672
Query: 328 FSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASX 387
P G RK+++STNIAETS+T+ +V+V+DSG K++ ++ ++ + L + ISKAS
Sbjct: 673 LKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASA 732
Query: 388 XXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILG 445
C+RL++ F + + PE+ R L + K L N I
Sbjct: 733 IQRKGRAGRCRPGICFRLFSRLRFQNMLEFQ-TPELLRMPLQELCLHTKLLAPVNCAIAD 791
Query: 446 FDWPASPPPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNEL 503
F A PP A+I A+++L ++ +D LT G+ +A++P+EP + KM+L + L
Sbjct: 792 FLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTE-LGYHLADLPVEPHLGKMVLCAVVL 850
Query: 504 GCSEEIITISAVLSIQSIWV-SGRGAQKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSC 560
C + I+TI+ L+ + +V + +QK + RF A DH+ L ++ + Q
Sbjct: 851 KCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAW-QKA 909
Query: 561 KSSHW----CHKNFINYHAM 576
+S W C KNF++ M
Sbjct: 910 RSDGWERAFCEKNFLSQATM 929
Score = 280 (103.6 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 68/172 (39%), Positives = 98/172 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLA AVA R Y IR E + T + F T+GVLLR +M D L+
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLS 307
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ + + L+LI+SSA ++ +F
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 41 (19.5 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ +C S W HK+ ++ A V +LI
Sbjct: 468 MDACLSDIWLHKD-VDAFAQVFHLI 491
Score = 40 (19.1 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 319 LSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
L ++Q+ ++S TP +RK ++ E+S+ +V+ V Q F S+I
Sbjct: 1300 LEISQQKGIWSTTPSNERK--LNRAFWESSMVY--LVFSVQGSGHFQGFSRMSSEI 1351
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 340 (124.7 bits), Expect = 5.2e-52, Sum P(2) = 5.2e-52
Identities = 94/312 (30%), Positives = 163/312 (52%)
Query: 277 GDILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
G IL+FL G D+I ++L ++ R + N+ + L+S + ++Q++V P G
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDKRFAD-NTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 696
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK+++STNIAETS+T+ +V+V+DSG K++ ++ ++ + L + ISKAS
Sbjct: 697 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAG 756
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILGFDWPASPP 453
C+RL++ F + + PE+ R L + K L N I F A P
Sbjct: 757 RCRPGICFRLFSRLRFQNMLEFQ-TPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEP 815
Query: 454 PEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P A+I A+++L ++ +D LT G+ +A++P+EP + KM+L + L C + I+T
Sbjct: 816 PPALIVRNAVQMLKTIDAMDAWEDLTE-LGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 874
Query: 512 ISAVLSIQSIWV-SGRGAQKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSCKSSHW--- 565
I+ L+ + +V + +QK + RF A DH+ L ++ + Q +S W
Sbjct: 875 IACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAW-QKARSDGWERA 933
Query: 566 -CHKNFINYHAM 576
C KNF++ M
Sbjct: 934 FCEKNFLSQATM 945
Score = 280 (103.6 bits), Expect = 5.2e-52, Sum P(2) = 5.2e-52
Identities = 68/172 (39%), Positives = 98/172 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 264
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLA AVA R Y IR E + T + F T+GVLLR +M D L+
Sbjct: 265 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLS 323
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ + + L+LI+SSA ++ +F
Sbjct: 324 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 375
Score = 41 (19.5 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ +C S W HK+ ++ A V +LI
Sbjct: 484 MDACLSDIWLHKD-VDAFAQVFHLI 507
Score = 40 (19.1 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 319 LSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
L ++Q+ ++S TP +RK ++ E+S+ +V+ V Q F S+I
Sbjct: 1316 LEISQQKGIWSTTPSNERK--LNRAFWESSMVY--LVFSVQGSGHFQGFSRMSSEI 1367
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 336 (123.3 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
Identities = 93/310 (30%), Positives = 162/310 (52%)
Query: 279 ILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRK 337
IL+FL G D+I ++L ++ R + N+ + L+S + ++Q++V P G RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFAD-NTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 338 VVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXX 397
+++STNIAETS+T+ +V+V+DSG K++ ++ ++ + L + ISKAS
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 398 XXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILGFDWPASPPPE 455
C+RL++ F + + PE+ R L + K L N I F A PP
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQ-TPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPP 802
Query: 456 AMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
A+I A+++L ++ +D LT G+ +A++P+EP + KM+L + L C + I+TI+
Sbjct: 803 ALIVRNAVQMLKTIDAMDAWEDLTE-LGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 861
Query: 514 AVLSIQSIWV-SGRGAQKELDE-AKLRFAAAE-GDHVTFLNIYKGFLQSCKSSHW----C 566
L+ + +V + +QK + RF A DH+ L ++ + Q +S W C
Sbjct: 862 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAW-QKARSDGWERAFC 920
Query: 567 HKNFINYHAM 576
KNF++ M
Sbjct: 921 EKNFLSQATM 930
Score = 283 (104.7 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
Identities = 68/172 (39%), Positives = 97/172 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLA AVA R Y IR E T + F T+GVLLR +M D L+
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ + + L+LI+SSA ++ +F
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 41 (19.5 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ +C S W HK+ ++ A V +LI
Sbjct: 469 MDACLSDIWLHKD-VDAFAQVFHLI 492
Score = 40 (19.1 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 319 LSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
L ++Q+ ++S TP +RK ++ E+S+ +V+ V Q F S+I
Sbjct: 1247 LEISQQKGIWSTTPSNERK--LNRAFWESSMVY--LVFSVQGSGHFQGFSRMSSEI 1298
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 339 (124.4 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
Identities = 93/312 (29%), Positives = 163/312 (52%)
Query: 277 GDILVFLTGQDDI-DATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
G +L+FL G D+I ++L ++ R + + + L+S + ++Q++V P G
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFM-LHSNMQTSDQKKVLKNPPAGV 681
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
RK+++STNIAETS+T+ +V+V+DSG K++ ++ ++ + L + ISKAS
Sbjct: 682 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAG 741
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN--ILGFDWPASPP 453
C+RL++ F + + PE+ R L + K L N I F A P
Sbjct: 742 RCRPGICFRLFSRLRFQNMLEFQ-TPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEP 800
Query: 454 PEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P A+I A+++L ++ +D LT G+ +A++P+EP + KM+L + L C + I+T
Sbjct: 801 PPALIVRNAVQMLKTIDAMDTWEDLTE-LGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 859
Query: 512 ISAVLSIQSIWV-SGRGAQKELDE-AKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHW--- 565
I+ L+ + +V + +QK + RF A A DH+ L ++ + Q +S W
Sbjct: 860 IACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAW-QKARSDGWERA 918
Query: 566 -CHKNFINYHAM 576
C KNF++ M
Sbjct: 919 FCEKNFLSQATM 930
Score = 280 (103.6 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
Identities = 68/172 (39%), Positives = 98/172 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQPR 104
RQ LPV++ + I+ +++ + +IVGETGSGKTTQIPQ+L + + +G I CTQPR
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 249
Query: 105 RLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM-DDPLLT 163
RLA AVA R Y IR E + T + F T+GVLLR +M D L+
Sbjct: 250 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLS 308
Query: 164 KYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ ++VDE HER +D LL L+ + + L+LI+SSA ++ +F
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 42 (19.8 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 557 LQSCKSSHWCHKNFINYHAMVRNLI 581
+ +C S W HK+ I+ A V +LI
Sbjct: 469 MDACLSDIWLHKD-IDAFAQVFHLI 492
Score = 40 (19.1 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 319 LSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
L ++Q+ ++S TP +RK ++ E+S+ +V+ V Q F S+I
Sbjct: 1301 LEISQQKGIWSTTPSNERK--LNRAFWESSIVY--LVFSVQGSGHFQGFSRMSSEI 1352
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 164/539 (30%), Positives = 258/539 (47%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIV--GETGSGKTTQIPQYLKEAGWADGGRV--IA 99
+QR+ LP++ R L +E+ + +++ GE GSGK+TQIPQ+ E A G + +
Sbjct: 40 EQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGRVT 99
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQP LA ++A R Y+I ED T D T ++F D +LL+E+
Sbjct: 100 VTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPD-TLLRFCWDRLLLQEVAST 158
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
+ V+++DEA ERS+++D+L GLL+ + L + + + + A +
Sbjct: 159 RGTGAWGVLVLDEAQERSVASDLLQGLLRNAK-----LGNLPGDSRVVVVTDPALEPKLQ 213
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDI 279
G + VPR G G Y + +D V+AA VL + KE PGD+
Sbjct: 214 AFWGNPTIVHVPR---------GPGACPTPVYRDIVPTDRVEAACQAVLELCAKEAPGDV 264
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LV+L +++I + L+ E +LPL+ G A Q + G RKVV
Sbjct: 265 LVYLPSEEEILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQA-AYEDIDLGARKVV 323
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
++ +A+ S +L I +V+DSG + YNP E+ V+ PIS+
Sbjct: 324 VTHWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPP 383
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
C LY E + E P P + NL V+ LK I + P PEA+++
Sbjct: 384 GSCICLYPESFLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQ 443
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
ALE L L LDDD L S G ++E PL P ++K +L+S E C +E++T++A+L+
Sbjct: 444 ALEDLDYLAALDDDGNL-SDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAA 502
Query: 520 SIWVSGRGAQKELDEAKLRFAA--AEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+ +EA LR A A+GDH + + +Y+ F+QS WC +N+ A+
Sbjct: 503 PGFTH---PPLSAEEAALRRALEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAAL 558
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 316 (116.3 bits), Expect = 7.4e-52, Sum P(3) = 7.4e-52
Identities = 82/262 (31%), Positives = 133/262 (50%)
Query: 326 QVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKA 385
QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 386 SXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILG 445
+ CY LY + +PE+ R+ L +Q+K L + I
Sbjct: 581 NAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 639
Query: 446 FDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNEL 503
F PP EA++ ++ L L LD +LT P G +A +P+EP I KMIL
Sbjct: 640 FLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLPVEPHIGKMILFGALF 698
Query: 504 GCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKS 562
C + ++TI+A LS + +V G +K D + A DH+T +N ++G+ ++ +
Sbjct: 699 CCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRR 758
Query: 563 SHWCHKNFINYHAMVRNLIWML 584
K++ + + N + ML
Sbjct: 759 GFRYEKDYCWEYFLSSNTLQML 780
Score = 291 (107.5 bits), Expect = 7.4e-52, Sum P(3) = 7.4e-52
Identities = 61/176 (34%), Positives = 102/176 (57%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVIACT 101
R++LP Y + ++ L++ H T+I GETG GKTTQ+ Q++ E G R++ CT
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIV-CT 262
Query: 102 QPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
QPRR++ +VA R Y IR + + +I + T G++L+ + D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
P L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S +F
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Score = 52 (23.4 bits), Expect = 7.4e-52, Sum P(3) = 7.4e-52
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 249 IHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEE 299
I +E+ D + V+ + I +E G ILVFL G D+I LL +
Sbjct: 462 IEMMEDDKVD-LNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 511
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 342 (125.4 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 94/313 (30%), Positives = 162/313 (51%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
G ILVFL G ++I T + L ++ + +S+ IIL L+S + EQ++VF+ PRG R
Sbjct: 576 GAILVFLPGWEEISKTKEKLLDDRFFA--HSAKFIILCLHSRVPAEEQKKVFNRPPRGCR 633
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+V++TNIAE+++T++ +VYV+DSG K++ Y+P +D+ L + +SKA+
Sbjct: 634 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 693
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID-NILGFDWPASPPP- 454
CY LY++ +P +PE+ R + +Q+K L + N+ F PP
Sbjct: 694 CQAGICYHLYSK-LRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPV 752
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+++ AL +L +G L + +LT G + ++P+ P ISKMI + + C + + ++
Sbjct: 753 AQSIENALIILKDIGALTPEEELTE-LGQKFGQLPVHPRISKMIYFAILVNCLDPALILA 811
Query: 514 AVLSIQSIWVS--GRGAQKELDEAKLRFAAAEGDH------VTFLNIYKGFLQSCKSSHW 565
+ + G +K+ AK A+ GDH V +K S ++ +
Sbjct: 812 CAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEF 871
Query: 566 CHKNFINYHAMVR 578
C K FI+ M R
Sbjct: 872 CSKYFISQVVMKR 884
Score = 270 (100.1 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 79/285 (27%), Positives = 139/285 (48%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACTQP 103
R +LP+ +R AI+ VE++ +I GETG GKTTQ+PQYL + W I CTQP
Sbjct: 214 RSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQP 273
Query: 104 RRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL-- 161
RR++ +V+ R Y +R + ++ +++ F T+G+LLR ++ +
Sbjct: 274 RRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRE-SSVVFCTNGILLRVLIGKGVNS 332
Query: 162 -LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
+ + I+VDE HER +D +L +L+ + LRLI+ SAT++A+ S +F
Sbjct: 333 SVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYF----- 387
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
G G +V R+ V + + + + ++ +AV DK + +
Sbjct: 388 --G--GCPVV-RVPGFTYPVRTFFLDDALSVLNSDKNSHLLSAVKRDFKDEDKVSLDEAI 442
Query: 281 VFLTGQDDIDATIQLLTEE----ARTSKKNSSGLIILPLYSGLSR 321
D+ D + L++ E A + +++GL L +++G R
Sbjct: 443 DLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGR 487
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 274 (101.5 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 69/213 (32%), Positives = 112/213 (52%)
Query: 43 EKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACT 101
+K R LP KY +L + + II G TG GKTTQ+PQ++ + + V + T
Sbjct: 175 QKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMVT 234
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A ++A R Y +R D D T + + T GVLLR + DP+
Sbjct: 235 QPRRIAAISIAERVARERGEPIGRTVGYQVRL-DSRRSDDTVLTYCTTGVLLRMLTSDPV 293
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
+ + I++DE HER I+TD LL L++ + R DL++I+ SATIE +M F + +
Sbjct: 294 ASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEG-NMQLFSNYFENH 352
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEE 254
++ ++ +E R F+V++ Y+++
Sbjct: 353 -SMD-----------VIRIESRAFDVKVFYLDQ 373
Score = 268 (99.4 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 65/229 (28%), Positives = 115/229 (50%)
Query: 258 DYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYS 317
DYV + + D G ILVFL G +DI ++ + + + S KN +I+LPL+S
Sbjct: 627 DYVLLD-QVIQYLADSPVFGTILVFLPGYEDIQQMLKAI-DCWKNSLKNMKNVIVLPLHS 684
Query: 318 GLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENL 377
++ +F P+ RK++++TNIAE S+T+E +++VVD+G K++ ++ + + L
Sbjct: 685 QMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTL 744
Query: 378 VVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLK- 436
V PI++++ C RLYTE+ + +P I EM+R+ + + K
Sbjct: 745 TVKPIARSNADQRSGRAGRVANGYCIRLYTEQEY-NSMPETQIAEMKRAAIYDVTLHAKL 803
Query: 437 ----ALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTG 481
L I L P P E++++A+ L +G K+ +G
Sbjct: 804 FAPKTLKISEFLSLA-PEPPEKESILQAITFLEQIGAFYTPIKIYDNSG 851
Score = 121 (47.7 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 29/110 (26%), Positives = 59/110 (53%)
Query: 472 DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKE 531
+D +LT G +A +PL+P +S+M+L L C I+ + A+L+ + +V ++
Sbjct: 869 EDPELTD-LGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRD 927
Query: 532 LDEAKLRFAAAE---GDHVTFLNIYKGFLQSCKS--SHWCHKNFINYHAM 576
L ++K++F A+ DH+ ++ + F S + +C +F+N+ M
Sbjct: 928 L-QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTM 976
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 314 (115.6 bits), Expect = 8.6e-51, Sum P(2) = 8.6e-51
Identities = 63/150 (42%), Positives = 95/150 (63%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
I + GR F V I + + P DYV+AAV L +H PGDIL+F+ GQ+DI+ T +
Sbjct: 111 IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQI 170
Query: 297 TEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVY 356
E +N+ L +LP+YS L Q ++F P G RK +++TNIAETSLT++GI++
Sbjct: 171 VEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF 229
Query: 357 VVDSGFSKQRFYNPISDIENLVVAPISKAS 386
V+DSG+ K + +NP ++ L + PIS+A+
Sbjct: 230 VIDSGYCKLKVFNPRIGMDALQIYPISQAN 259
Score = 241 (89.9 bits), Expect = 8.6e-51, Sum P(2) = 8.6e-51
Identities = 49/106 (46%), Positives = 73/106 (68%)
Query: 110 AVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIM 169
+VA R Y IRFED T++ T IK++TDG+LLRE + + L YS I+
Sbjct: 2 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTDGILLRESLREADLDHYSAII 60
Query: 170 VDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+ ++FF
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 106
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 537 (194.1 bits), Expect = 1.4e-50, P = 1.4e-50
Identities = 165/521 (31%), Positives = 261/521 (50%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG--GRV-IACTQPRR 105
LPV ++ IL +E + +I G+TG GKTT+IPQ L E +G R + TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
++ +VA R Y +R E A+ F T G+LLR++ +P L
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLE 225
S ++VDE HER ++TD LL LLK IQ+ DLRL++ SAT + + S +F + +
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVK-VP 656
Query: 226 GVELVPRLEPAILSVEGR-GFNVQIHYV-----EEPVSDYVQAAVSTVLLIHDKEPPGDI 279
G + P E + + + G + HY +E V D + VL I PG I
Sbjct: 657 GF-MYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLD-LDLITDLVLQIDAHGEPGGI 714
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
L FL G +I Q L E +NS L+ LP++S + +Q+ +F P G RK+V
Sbjct: 715 LCFLPGWQEIKGVQQRLLE--MLGSQNSRYLV-LPVHSNIPMMDQQNIFQRPPPGVRKIV 771
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +SK++
Sbjct: 772 LATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQS 831
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA--SPPPEA 456
Y L+ K +P +PE+ R+ L + V+Q K + + F A SP +A
Sbjct: 832 GFAYHLFPRSRLDK-MPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKA 890
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
+ A+ +L +GVLD LT+ G ++A+I +P ++K I+ ++ C ++ I + L
Sbjct: 891 VDEAVILLQEIGVLDQREALTT-LGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCL 949
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + + S + E+D+AK + G DH+ F+ G+
Sbjct: 950 T-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 535 (193.4 bits), Expect = 2.3e-50, P = 2.3e-50
Identities = 165/521 (31%), Positives = 261/521 (50%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG--GRV-IACTQPRR 105
LPV ++ IL +E + +I G+TG GKTT+IPQ L E +G R + TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 106 LAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKY 165
++ +VA R Y +R E A+ F T G+LLR++ +P L
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 166 SVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLE 225
S ++VDE HER ++TD LL LLK IQ+ DLRL++ SAT + + S +F + +
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVK-VP 656
Query: 226 GVELVPRLEPAILSVEGR-GFNVQIHYV-----EEPVSDYVQAAVSTVLLIHDKEPPGDI 279
G + P E + + + G + HY +E V D + VL I PG I
Sbjct: 657 GF-MYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLD-LDLITDLVLQIDAHGEPGGI 714
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
L FL G +I Q L E +NS L+ LP++S + +Q+ +F P G RK+V
Sbjct: 715 LCFLPGWQEIKGVQQRLLE--MLGSQNSRYLV-LPVHSNIPMMDQQNIFQRPPPGVRKIV 771
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +SK++
Sbjct: 772 LATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQS 831
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA--SPPPEA 456
Y L+ K +P +PE+ R+ L + V+Q K + + F A SP +A
Sbjct: 832 GFAYHLFPRSRLDK-MPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKA 890
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
+ A+ +L +GVLD LT+ G ++A+I +P ++K I+ ++ C ++ I + L
Sbjct: 891 VDEAVILLQEIGVLDQREALTT-LGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCL 949
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + + S + E+D+AK + G DH+ F+ G+
Sbjct: 950 T-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 534 (193.0 bits), Expect = 2.5e-50, P = 2.5e-50
Identities = 163/527 (30%), Positives = 263/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 401 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 459
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 460 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 519
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 520 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 579
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRGFNVQIHYVEEPVSDY-VQAAVSTVLLIH-D-K 273
+ + G + P E IL+ G+ + H E + + + T L++H D +
Sbjct: 580 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDAR 637
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 638 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 694
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 695 GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 754
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 755 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 813
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 814 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 872
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 873 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 918
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 534 (193.0 bits), Expect = 2.7e-50, P = 2.7e-50
Identities = 163/527 (30%), Positives = 263/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 547
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRGFNVQIHYVEEPVSDY-VQAAVSTVLLIH-D-K 273
+ + G + P E IL+ G+ + H E + + + T L++H D +
Sbjct: 608 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDAR 665
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 666 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 722
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 723 GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 782
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 783 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 841
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 900
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 901 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 162/539 (30%), Positives = 261/539 (48%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIV--GETGSGKTTQIPQYLKEAGWADGGRV--IA 99
+QR+ LPV+ R L +E+ + +++ GE G GK+TQIPQ+ E A G + +
Sbjct: 40 EQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVT 99
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQP LA ++A R Y+I ED T D T ++F D +LL+E+
Sbjct: 100 VTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPD-TLLRFCWDRLLLQEVAST 158
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
V+++DEA ERS+++D+L GLL+ D RL S + + + + +
Sbjct: 159 RGTGARGVLILDEAQERSVASDLLQGLLR-------DARL--GSLPGDLRVVVVTDPSLE 209
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDI 279
+ L+ P P + G Y + +D V AA VL +E PGD+
Sbjct: 210 PK--LQDFWGGP---PTVCVPRKTGSCPTPVYRDSLPADRVDAACQAVLEWCQEEAPGDV 264
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LV+L +++I + L+ + R+ + +LPL+ G +A Q V+ T G RKVV
Sbjct: 265 LVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVV 323
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXXX 399
++ +A+ S +L I +V+DSG + Y+P E+ V+ P+SK
Sbjct: 324 VTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPP 383
Query: 400 XKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
C LY + + E P P + NL S ++ LK I + P PEA+++
Sbjct: 384 GSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQ 443
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
ALE L L LDDD L S G ++E PL P ++K +L+S E C +E++T++A+L+
Sbjct: 444 ALEDLDYLAALDDDGDL-SDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAA 502
Query: 520 SIWVSGRGAQKELDEAKLRFAA--AEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+ +EA LR A +GDH + + +Y+ F+QS WC +N+ A+
Sbjct: 503 PGFTRPPVCA---EEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAAL 558
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 534 (193.0 bits), Expect = 2.9e-50, P = 2.9e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 636 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 693
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 694 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 750
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 751 GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 810
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 811 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 869
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 870 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 928
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 929 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 974
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 533 (192.7 bits), Expect = 3.4e-50, P = 3.4e-50
Identities = 164/527 (31%), Positives = 262/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRGFNVQIHYVEEPVSDY-VQAAVSTVLLIH-D-K 273
+ + G + P E IL+ G+ + H E + + + T L++H D +
Sbjct: 608 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDAR 665
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 666 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 722
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 723 GVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 782
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 783 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 841
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I EP ++K I+ + C ++
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTEPRLAKAIVLAAIFRCLHPLL 900
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 901 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 522 (188.8 bits), Expect = 3.7e-50, P = 3.7e-50
Identities = 138/450 (30%), Positives = 238/450 (52%)
Query: 142 TAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLII 201
T +++ TD +L REMM +P L Y VI++D+ HERSI+TD+LLGLLK + R +L+LII
Sbjct: 156 TILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLII 215
Query: 202 SSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQ 261
+S+ +++++ G VP ++ V+ + V++ Y+ E D +
Sbjct: 216 NSSPHLISKLNSYY----GN--------VP-----VIEVKNK-HPVEVVYLSEAQKDSFE 257
Query: 262 AAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSR 321
+ + + IH GDI+VFL + DI+ + + + + + + L+++PLY
Sbjct: 258 SILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSNLNP-DLGELVVVPLYP---- 312
Query: 322 AEQEQVFSP---TPRG----KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDI 374
E+ +F P T + +R+VV++T+ E + + +V+D G +++ YNP
Sbjct: 313 KEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRA 372
Query: 375 ENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQ 434
+LV+ PIS++ K + LYTEE+ K++ EMQ +NL S V+
Sbjct: 373 NSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLF 432
Query: 435 LKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMIS 494
+K + I + D+ P PE++++ALE L L LD+D L S G ++E PL+P +S
Sbjct: 433 MKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNL-SEFGIIMSEFPLDPQLS 491
Query: 495 KMILSSNELGCSEEIITISAVLSIQSIWVS-GRGAQKELDEAKLRFAAAEGDHVTFLNIY 553
K IL+S E C +E++TI+A+++ + + GA++ F EGDH T ++IY
Sbjct: 492 KSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIY 551
Query: 554 KGFLQSCKSSH-------WCHKNFINYHAM 576
K + + +S WC F+N A+
Sbjct: 552 KAYQDTTLNSSSEYCVEKWCRDYFLNCSAL 581
Score = 256 (95.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/176 (32%), Positives = 98/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE----AGWADGGRVIA 99
K+R+ LP++K + + + + + I+ G+ GK+ Q+PQ+ E + GG +
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGG--VI 114
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
CTQ + V +A R Y I FE+ + T +++ TD +L REMM +
Sbjct: 115 CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNE-TILRYCTDDMLQREMMSN 173
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
P L Y VI++D+ HERSI+TD+LLGLLK + R +L+LII+S+ +++++
Sbjct: 174 PFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYY 229
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 531 (192.0 bits), Expect = 4.9e-50, P = 4.9e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 487
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 608 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 665
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 666 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 722
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 723 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 782
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 783 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 841
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 900
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 901 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 531 (192.0 bits), Expect = 5.6e-50, P = 5.6e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 608 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 665
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 666 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPL 722
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 723 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 782
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 783 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 841
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 900
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 901 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 531 (192.0 bits), Expect = 5.6e-50, P = 5.6e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 608 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 665
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 666 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPL 722
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 723 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 782
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 783 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 841
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 900
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 901 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 531 (192.0 bits), Expect = 5.9e-50, P = 5.9e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 452 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 510
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 511 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 570
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 571 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 630
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 631 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 688
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 689 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPL 745
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 746 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 805
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 806 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 864
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 865 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 923
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 924 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 969
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 531 (192.0 bits), Expect = 6.0e-50, P = 6.0e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 636 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 693
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 694 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPV 750
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 751 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 810
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 811 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 869
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 870 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 928
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 929 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 974
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 531 (192.0 bits), Expect = 6.0e-50, P = 6.0e-50
Identities = 162/527 (30%), Positives = 260/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 457 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 636 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 693
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 694 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPL 750
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 751 GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 810
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K +P + +PE+ R+ L + V+Q K + + F A
Sbjct: 811 AGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 869
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 870 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 928
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 929 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 974
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 530 (191.6 bits), Expect = 7.6e-50, P = 7.6e-50
Identities = 162/527 (30%), Positives = 259/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 574 PSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 633
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 634 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 691
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 692 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPI 748
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 749 GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 808
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K P + +PE+ R+ L + V+Q K + + F A
Sbjct: 809 AGRCQSGFAYHLFPRSRLEKMAPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 867
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 868 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 926
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 927 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 972
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 315 (115.9 bits), Expect = 9.4e-50, Sum P(3) = 9.4e-50
Identities = 82/262 (31%), Positives = 134/262 (51%)
Query: 326 QVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKA 385
QVF TP G RK+VI+TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 386 SXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILG 445
+ CY LY + +PE+ R+ L +Q+K L + I
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 633
Query: 446 FDWPASPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNEL 503
F PP EA+ +++ L L LD +LT P G +A +P+EP I KMIL
Sbjct: 634 FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELT-PLGVHLARLPVEPHIGKMILFGALF 692
Query: 504 GCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKS 562
C + ++TI+A LS + +V G +K D + A + DH+T +N ++G+ ++ +
Sbjct: 693 CCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRR 752
Query: 563 SHWCHKNFINYHAMVRNLIWML 584
K++ + + N + ML
Sbjct: 753 GFRYEKDYCWEYFLSSNTLQML 774
Score = 274 (101.5 bits), Expect = 9.4e-50, Sum P(3) = 9.4e-50
Identities = 58/176 (32%), Positives = 100/176 (56%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADGGRVIACT 101
R++LP Y + ++ +++ H T+I GETG GKTTQ+ Q++ E G R++ CT
Sbjct: 198 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIV-CT 256
Query: 102 QPRRLAVQAVASRXXXXXXXX--XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
QPRR++ +VA R Y IR + + +I + T G++L+ + D
Sbjct: 257 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 316
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
L+ S I++DE HER++ +D+L+ ++K + R DL++I+ SAT+ A+ S +F
Sbjct: 317 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 372
Score = 50 (22.7 bits), Expect = 9.4e-50, Sum P(3) = 9.4e-50
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 258 DYVQAAVSTVLLIHD--KEPPGDILVFLTGQDDIDATIQLLTEE 299
D V + L+ H +E G ILVFL G D+I LL +
Sbjct: 462 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 505
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 529 (191.3 bits), Expect = 9.7e-50, P = 9.7e-50
Identities = 165/530 (31%), Positives = 265/530 (50%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRGFNVQIH-YVEEPVSD---YVQAAVSTVLLIH- 271
+ + G + P E IL+ G+ H + E P S+ + + T L++H
Sbjct: 636 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHEWPRSEDECALDLDLVTDLVLHI 693
Query: 272 D-KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSP 330
D + PG IL FL G +I Q L E + S +ILP++S + +Q+ +F
Sbjct: 694 DARGEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQ 750
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXX 390
P G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 751 PPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 810
Query: 391 XXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWP 449
Y L+ K +P + +PE+ R+ L + V+Q K + + F
Sbjct: 811 RGRAGRCQSGFAYHLFPRSRLEKMVPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSK 869
Query: 450 A--SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSE 507
A SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C
Sbjct: 870 AVDSPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLH 928
Query: 508 EIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
++ + + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 929 PLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 977
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 529 (191.3 bits), Expect = 9.7e-50, P = 9.7e-50
Identities = 162/527 (30%), Positives = 259/527 (49%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++ +LPV +R IL +E H +I G+TG GKTT+IPQ L E + GR C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R + +R E A+ F T G+LLR++ +
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L S ++VDE HER ++TD LL LLK +QR LRL++ SAT + + S +F
Sbjct: 574 PSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 633
Query: 220 GRRGLEGVELVPRLE---PAILSVEGRG---FNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+ + G + P E IL+ G+ + H E+ + + VL I +
Sbjct: 634 VIK-VPGF-MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDAR 691
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPR 333
PG IL FL G +I Q L E + S +ILP++S + +Q+ +F P
Sbjct: 692 GEPGGILCFLPGWQEIKGVQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPI 748
Query: 334 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXX 393
G RK+V++TNIAETS+T+ IV+VVDSG K+ Y+ + + L +S+A+
Sbjct: 749 GVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR 808
Query: 394 XXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKA-LGIDNILGFDWPA-- 450
Y L+ K P + +PE+ R+ L + V+Q K + + F A
Sbjct: 809 AGRCQSGFAYHLFPRSRLEKMAPFQ-VPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVD 867
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
SP +A+ A+ +L +GVLD LT+ G ++A I +P ++K I+ + C ++
Sbjct: 868 SPNIKAVDEAVILLQEIGVLDQREYLTT-LGQRLAHISTDPRLAKAIVLAAIFRCLHPLL 926
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEG-DHVTFLNIYKGF 556
+ + L+ + + S + E+D+ K + G DH+ F+ G+
Sbjct: 927 VVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 972
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 328 (120.5 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 85/305 (27%), Positives = 164/305 (53%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
G I+VFL G +I+ LL +K N + ++LPL+S L+ +Q++VF GKR
Sbjct: 864 GSIIVFLPGVGEINKCCNLLA-----NKSNEADFMVLPLHSALTPEDQKRVFKKY-HGKR 917
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
KVV+STNIAETS+T++ V +D+G +K FYNP + L+ + ISKA
Sbjct: 918 KVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGR 977
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA--SPPP 454
Y+L+++ + ++ + IPE++R L S + +KA+GI ++ F A +PP
Sbjct: 978 VREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPL 1037
Query: 455 EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIP-LEPMISKMILSSNELGCSEEIITIS 513
A+ +A +L ++G++D+ K + G ++ +P ++ K+++ GC++ + +
Sbjct: 1038 PALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLV 1097
Query: 514 AVLSIQSI-WVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS---HWCHKN 569
++L I + ++ G ++++ + ++ + GD L I + + + SS + N
Sbjct: 1098 SILGIGVLPFIGGFENREKIKKLLCKYES-RGDLFAVLEIVRDYFKIKDSSIKRKYLRDN 1156
Query: 570 FINYH 574
++Y+
Sbjct: 1157 LLSYN 1161
Score = 267 (99.0 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 62/177 (35%), Positives = 102/177 (57%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYL-----KEAGWADGGRV-IA 99
R++LP +K + I+ ++ + +I GETGSGK+TQ+ Q++ KE G D G+ I
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKG--DFGKTKIV 658
Query: 100 CTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
CTQPRR++ +A R Y IR + T K T IKF+T GVL+R + +
Sbjct: 659 CTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKT-KASTRIKFMTTGVLVRLLQNA 717
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKI-QRCRSDLRLIISSATIEAKSMSAFF 215
+ + +++++DE HERSI TD+++ L+K + R R +++++ SAT+ FF
Sbjct: 718 RTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRG-MKIVLMSATVNVDLFKKFF 773
Score = 48 (22.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 23/106 (21%), Positives = 45/106 (42%)
Query: 227 VELVPRLEPAILS--VEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKE---------- 274
V+L + P + + +EGR F + +++E+ +SD L +D +
Sbjct: 766 VDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQ 825
Query: 275 ---PPGDILVFLTGQDDIDATIQLLT---EEARTSKKNSSGLIILP 314
P D F +GQ + D Q++ + + + N S ++ LP
Sbjct: 826 YLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLP 871
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 323 (118.8 bits), Expect = 3.6e-49, Sum P(2) = 3.6e-49
Identities = 86/286 (30%), Positives = 148/286 (51%)
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
G +LVFL G +I L E + N ILPL+S L+ EQ +VF+ P GKR
Sbjct: 660 GAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE--ILPLHSQLTSQEQRKVFNHYP-GKR 716
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXX 396
K+++STNIAETS+T++ +VYV+DS +K+R Y +++ + SK +
Sbjct: 717 KIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGR 776
Query: 397 XXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPPE 455
+ L ++ F + + G EM R L + +K L + ++ F A PPP
Sbjct: 777 VRAGYAFHLCSKMRF-EALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPY 835
Query: 456 AMIRALE-VLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISA 514
M+ E VL ++G LD + +LTS G +A +P+EP+I+K+++ LG + +++
Sbjct: 836 DMVVESEAVLQAMGALDRNLELTS-LGKMLARMPIEPVIAKVLILGTALGAGSVMCDVAS 894
Query: 515 VLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGFLQS 559
+S + +V L + +FA + DHV +++ +G+ ++
Sbjct: 895 AMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREA 940
Score = 271 (100.5 bits), Expect = 3.6e-49, Sum P(2) = 3.6e-49
Identities = 73/214 (34%), Positives = 117/214 (54%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGW--ADGGRVIAC-T 101
QR LPV +YR I+ V + T+I GETG GK+TQ+ Q+L E+ ++G A +
Sbjct: 377 QRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVS 436
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR++ ++A R Y +RF+ T + +I F T GVLLR MM++ L
Sbjct: 437 QPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR-MMENGL 495
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
S +++DE HER + TD +L +L+++ DLR+++ SATI+ + FF +
Sbjct: 496 -RGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSS---- 550
Query: 222 RGLEGVELVPRLEPA-ILSVEGRGFNVQIHYVEE 254
+P + P ++++ GR F VQ Y+E+
Sbjct: 551 --------IPDVGPTPVITMHGRTFPVQSFYLED 576
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 97/254 (38%), Positives = 165/254 (64%)
Query: 323 EQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPI 382
+Q ++F P G RK +++TNIAETSLT++GI++V+DSG+ K + +NP ++ L + PI
Sbjct: 98 DQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 157
Query: 383 SKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDN 442
S+A+ +C+RLYT+ + E+ +PE+QR+NL + V+ LK+LG+ +
Sbjct: 158 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD 217
Query: 443 ILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNE 502
+L F + PP + M+ ++ L+ LG LD+ LTS TG + E PL+P +SKM++ S +
Sbjct: 218 LLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCD 276
Query: 503 LGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKS 562
+GCS EI+ I ++LS+ +I+ +G ++E D+ + +FA E DH+T+LN+Y + + S
Sbjct: 277 MGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYS 336
Query: 563 SHWCHKNFINYHAM 576
+ WC+ +FI+ AM
Sbjct: 337 TIWCNDHFIHAKAM 350
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 320 (117.7 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 93/309 (30%), Positives = 155/309 (50%)
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
ILVFL G +I LL + R+ ++N ++ PL+S ++ EQE F P G RK+
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGD-RSFQQN---WLVYPLHSTIATEEQEAAFLVPPHGMRKI 1025
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
V++TNIAET +T+ + V+D+G ++ ++ + L+ IS+A+
Sbjct: 1026 VLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQ 1085
Query: 399 XXKCYRLYTEEYFVKEIPAEG-IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA- 456
C+ ++T+ Y I A+ PEM R +L I++K I I A PP A
Sbjct: 1086 QGLCFHMFTK-YRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLSKALDPPSAK 1144
Query: 457 -MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAV 515
+ RA++ L + L LT P G Q+A +PL+ + K+IL + C + IT++A+
Sbjct: 1145 NIRRAIDALIDVRALTQGEDLT-PLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAI 1203
Query: 516 LSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSC-----KSSH---WCH 567
LS +S +V+ G + + D +L F + D +T N Y + + C SS +C
Sbjct: 1204 LSSKSPFVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCR 1263
Query: 568 KNFINYHAM 576
KNF++ +
Sbjct: 1264 KNFLSQQTL 1272
Score = 269 (99.8 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 61/178 (34%), Positives = 100/178 (56%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQ 102
+ R +LP++ +R +L V+ H I+ GETG GK+TQ+P +L E A G I CT+
Sbjct: 686 RSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTE 745
Query: 103 PRRLAVQAVASRXXXXXXX------XXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
PRR++ ++A R Y+IR E T+++ T + F T G+++R +
Sbjct: 746 PRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRE-TRLVFATTGIVMRML 804
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
L + +++DE HERSI +D LL +LKK+ R DL++++ SAT++A S +
Sbjct: 805 EGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNY 862
Score = 39 (18.8 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 144 IKFLTDGVLLREMMDDPLLTKYSVIMVDE-AH---ERSISTDILLGLLKKIQRCRSDL 197
+ FL D V L D + + ++ +DE A E S T++L L R R+ L
Sbjct: 880 VNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKTELLKSLKGYSTRTRNTL 937
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 311 (114.5 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 90/317 (28%), Positives = 164/317 (51%)
Query: 272 DKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPT 331
D E G ILVFL G DDI+ T Q L E + +S+ I+ L+S + EQ++VF+
Sbjct: 548 DSED-GAILVFLPGWDDINKTRQRLLENPFFA--DSAKFDIICLHSMVPAGEQKKVFNRP 604
Query: 332 PRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXX 391
P G RK+V++TNIAE+++T++ +VYV+DSG K++ Y+P +++ L + +SKA+
Sbjct: 605 PPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQ 664
Query: 392 XXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGID-NILGFDWPA 450
CY LY+ +P +PE++R + +Q+K L + F
Sbjct: 665 GRAGRCQPGICYHLYSR-LRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKL 723
Query: 451 SPPP--EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEE 508
PP +++ AL +L +G L +LT G + +P+ P+ISKM+ + + C +
Sbjct: 724 LDPPVDQSIANALSILQDIGALTPQEELTE-LGEKFGHLPVHPLISKMLFFAVLVNCLDP 782
Query: 509 IITISAVLSIQSIWVSGRGA--QKELDEAKLRFAA---AEGDHVTFLNIYKGFLQSCK-- 561
+T++ + + +++ AKL A+ + DH+ + ++ + ++ K
Sbjct: 783 ALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECW-KNAKGR 841
Query: 562 --SSHWCHKNFINYHAM 576
S+ +C + F++ AM
Sbjct: 842 GLSAEFCSQYFVSPSAM 858
Score = 276 (102.2 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 83/290 (28%), Positives = 140/290 (48%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV--IACT 101
K R +LP+ ++ AI VE++ +I GETG GKTTQ+PQYL + W+ I CT
Sbjct: 182 KLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCT 241
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR++ +V+ R Y +R + + +++ F T+G+LLR ++
Sbjct: 242 QPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRH-SSVVFCTNGILLRVLVGKGS 300
Query: 162 LTKYSVI---MVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHAR 218
++ S I +VDE HER +D +L +++ + LRLI+ SAT++A+ S +F
Sbjct: 301 VSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGC 360
Query: 219 KGRRGLEGVELVPR---LEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
R + G R LE +LS+ G + + +SD+ L DK
Sbjct: 361 PVVR-VPGFTYPVRTLYLED-VLSILKSGGDNHLSSTNLSISDH-----KLDLTDEDKLA 413
Query: 276 PGDILVFLTGQDDIDATIQLLTE----EARTSKKNSSGLIILPLYSGLSR 321
+ ++ D+ DA + L++ E + S+ L L +++G R
Sbjct: 414 LDEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGR 463
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 298 (110.0 bits), Expect = 8.3e-47, Sum P(2) = 8.3e-47
Identities = 88/291 (30%), Positives = 139/291 (47%)
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKK-NSSGLIILPLYSGLSRAEQEQVF 328
I E PG +LVFL G + I + + + ILPL+S + R EQ +VF
Sbjct: 650 IETLEVPGAVLVFLPGWN----LIYFMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVF 705
Query: 329 SPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXX 388
P P G KV++STNIAETS+T+ +V+V+DS K + + +++ N SK +
Sbjct: 706 EPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLE 765
Query: 389 XXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDW 448
C+ L + F K + PE+ R+ L + +K L + I F
Sbjct: 766 QRKGRAGRVRPGFCFHLCSRARFEK-LETHMTPEIFRTPLHEVALSIKLLRLGGIGNFLS 824
Query: 449 PA-SPPP-EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCS 506
A PPP +A+I A L L LD + +LT P G +A++P+EP + KM++
Sbjct: 825 KAIEPPPLDAVIEAEHTLRELDALDSNDELT-PLGRILAKLPIEPRLGKMMIMGCIFNVG 883
Query: 507 EEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
+ + TISA +++ G K L FA + DHV L++++ +
Sbjct: 884 DAVCTISAATCFPEPFIN-EG--KRLGFVHRNFAGSRFSDHVALLSVFQAW 931
Score = 276 (102.2 bits), Expect = 8.3e-47, Sum P(2) = 8.3e-47
Identities = 64/175 (36%), Positives = 97/175 (55%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC---- 100
+R +LPV ++ I+ + + II G TG GKTTQ+PQY+ + + GGR C
Sbjct: 391 ERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDE-FIKGGRASDCNIVV 449
Query: 101 TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR++ +VA R Y++RFE F + +I F T GVLLR++
Sbjct: 450 TQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKLESG- 508
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + D+R+I+ SATI+ +F
Sbjct: 509 -IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYF 562
Score = 43 (20.2 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1 MSQFWKPGAEKPRLLDDEEGG 21
M+QF P ++ R D+EGG
Sbjct: 588 MTQFVPPPMDRKRKDKDDEGG 608
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 306 (112.8 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 93/284 (32%), Positives = 138/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E S S ILPL+S + R EQ +VF P P G
Sbjct: 652 PGAVLVFLPGWNLI-YTMQKHLEN--NSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 708
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 709 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 769 RVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 827
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + + TIS
Sbjct: 828 LDAIIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTIS 886
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A ++S G K L FA DHV L++++ +
Sbjct: 887 AATCFPEPFIS-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 927
Score = 267 (99.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 62/176 (35%), Positives = 97/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ IL + +++ II G TG GKTTQ+PQY+ + + R C
Sbjct: 385 QERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAECNIV 443
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ AVA R Y++RFE + +I F T GVLLR++ +
Sbjct: 444 VTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 501
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + ++R+++ SATI+ +F
Sbjct: 502 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYF 557
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 306 (112.8 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 93/284 (32%), Positives = 138/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E S S ILPL+S + R EQ +VF P P G
Sbjct: 653 PGAVLVFLPGWNLI-YTMQKHLEN--NSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 709
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 710 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 769
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 770 RVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 828
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + + TIS
Sbjct: 829 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTIS 887
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A ++S G K L FA DHV L++++ +
Sbjct: 888 AATCFPEPFIS-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 928
Score = 265 (98.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 62/176 (35%), Positives = 96/176 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ IL + ++ II G TG GKTTQ+PQY+ + + R C
Sbjct: 386 QERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAECNIV 444
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ AVA R Y++RFE + +I F T GVLLR++ +
Sbjct: 445 VTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 502
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + ++R+++ SATI+ +F
Sbjct: 503 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYF 558
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 303 (111.7 bits), Expect = 4.1e-46, Sum P(2) = 4.1e-46
Identities = 92/284 (32%), Positives = 137/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E S ILPL+S + R EQ +VF P P G
Sbjct: 651 PGAVLVFLPGWNLI-YTMQKHLE--MNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGV 707
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 708 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 767
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 768 RVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 826
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + + TIS
Sbjct: 827 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTIS 885
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A ++S G K L FA DHV L++++ +
Sbjct: 886 AATCFPEPFIS-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 926
Score = 264 (98.0 bits), Expect = 4.1e-46, Sum P(2) = 4.1e-46
Identities = 60/176 (34%), Positives = 98/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + ++ II G TG GKTTQ+PQ++ + + R C
Sbjct: 384 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAECNIV 442
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 443 VTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL--E 500
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 501 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 556
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 487 (176.5 bits), Expect = 5.6e-46, P = 5.6e-46
Identities = 147/554 (26%), Positives = 252/554 (45%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR--VIACT 101
K+RQ LPV+K R A + + H I+ G+ +GK++Q+PQ+ E A G R C+
Sbjct: 67 KERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAVCS 126
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
Q +A R Y + FE + T +++ TD +L REMM PL
Sbjct: 127 QAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAE-TILRYCTDDMLQREMMSAPL 185
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L Y VI++D+ HER++ TD+LLG+LK + R R LRL+I +A + + F +
Sbjct: 186 LNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGS---- 241
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
VP ++ VE ++ Y D+ +A+ + +H + GDI++
Sbjct: 242 --------VP-----LIRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVI 287
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLY---SGLSRAEQEQVFSPTPRGKRKV 338
FL + DID Q++ +E S + LI +PLY + L + + +RKV
Sbjct: 288 FLACEQDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQKYRRKV 347
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
+++T+ + + ++ I +V+D G +++ YNP +++ PISKA
Sbjct: 348 LLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSP 407
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASP--PPEA 456
K + LY EE+ KE+ + ++Q SNL S V+ LK + I ++ + P PP A
Sbjct: 408 SGKLFCLYPEEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSA 467
Query: 457 M--IRALEVLYSL---GVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
IR+ + G + + L+ G L + + + C E++
Sbjct: 468 KHGIRSTGKTHQTRRQGSISAHSYLSQNFGI------LNKKGESLSVPCS-FTCHTEVLP 520
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLR-FAAAEGDHVTFLNIYKGFL--------QSCKS 562
I +L + ++ +E+ R F+ GDH T +N++ F Q C +
Sbjct: 521 IHVLLHAPNCFLHTPSGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSN 580
Query: 563 SHWCHKNFINYHAM 576
WC F++ A+
Sbjct: 581 EKWCRNYFLSCSAL 594
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 307 (113.1 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 98/312 (31%), Positives = 149/312 (47%)
Query: 248 QIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
Q++ E P + ++A + L I PG +LVFL G + I T+Q E S
Sbjct: 623 QLNEKETPF-ELIEALL---LYIETLNVPGAVLVFLPGWNLI-YTMQKHLE--MNPHFGS 675
Query: 308 SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRF 367
ILPL+S + R EQ +VF P P G K+++STNIAETS+T+ +VYV+DS K +
Sbjct: 676 HRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKL 735
Query: 368 YNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSN 427
+ +++ N SK + C+ L + F + + PEM R+
Sbjct: 736 FTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTP 794
Query: 428 LVSCVIQLKALGIDNILGFDWPA-SPPP-EAMIRALEVLYSLGVLDDDAKLTSPTGFQVA 485
L + +K L + I F A PPP +A+I A L L LD + +LT P G +A
Sbjct: 795 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT-PLGRILA 853
Query: 486 EIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE-G 544
++P+EP KM++ + I TISA ++S G K L FA
Sbjct: 854 KLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS-EG--KRLGYIHRNFAGNRFS 910
Query: 545 DHVTFLNIYKGF 556
DHV L++++ +
Sbjct: 911 DHVALLSVFQAW 922
Score = 258 (95.9 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 60/176 (34%), Positives = 96/176 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + + II G TG GKTTQ+PQ++ + R C
Sbjct: 380 QERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILD-DCIQNDRAAECNIV 438
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 439 VTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 496
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 497 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 552
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 307 (113.1 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 98/312 (31%), Positives = 149/312 (47%)
Query: 248 QIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNS 307
Q++ E P + ++A + L I PG +LVFL G + I T+Q E S
Sbjct: 623 QLNEKETPF-ELIEALL---LYIETLNVPGAVLVFLPGWNLI-YTMQKHLE--MNPHFGS 675
Query: 308 SGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRF 367
ILPL+S + R EQ +VF P P G K+++STNIAETS+T+ +VYV+DS K +
Sbjct: 676 HRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKL 735
Query: 368 YNPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSN 427
+ +++ N SK + C+ L + F + + PEM R+
Sbjct: 736 FTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTP 794
Query: 428 LVSCVIQLKALGIDNILGFDWPA-SPPP-EAMIRALEVLYSLGVLDDDAKLTSPTGFQVA 485
L + +K L + I F A PPP +A+I A L L LD + +LT P G +A
Sbjct: 795 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT-PLGRILA 853
Query: 486 EIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE-G 544
++P+EP KM++ + I TISA ++S G K L FA
Sbjct: 854 KLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS-EG--KRLGYIHRNFAGNRFS 910
Query: 545 DHVTFLNIYKGF 556
DHV L++++ +
Sbjct: 911 DHVALLSVFQAW 922
Score = 258 (95.9 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 60/176 (34%), Positives = 96/176 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + + II G TG GKTTQ+PQ++ + R C
Sbjct: 380 QERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILD-DCIQNDRAAECNIV 438
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 439 VTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 496
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 497 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 552
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 299 (110.3 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 92/284 (32%), Positives = 137/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E + ILPL+S + R EQ +VF P P G
Sbjct: 642 PGAVLVFLPGWNLI-YTMQKHLE--MNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAGV 698
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 699 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 758
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 759 RVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 817
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + I TIS
Sbjct: 818 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIS 876
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A ++S G K L FA DHV L++++ +
Sbjct: 877 AATCFPEPFIS-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 917
Score = 260 (96.6 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 59/176 (33%), Positives = 97/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + + I+ G TG GKTTQ+PQ++ + + R C
Sbjct: 379 QERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILD-DFIQNDRAAECNIV 437
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 438 VTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 495
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 496 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 551
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 296 (109.3 bits), Expect = 3.2e-45, Sum P(2) = 3.2e-45
Identities = 91/284 (32%), Positives = 137/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E S ILPL+S + R EQ +VF P P G
Sbjct: 650 PGAVLVFLPGWNLI-YTMQKHLE--MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGV 706
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 767 RVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + I TI+
Sbjct: 826 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIA 884
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A +++ G K L FA DHV L++++ +
Sbjct: 885 AATCFPEPFIN-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 925
Score = 263 (97.6 bits), Expect = 3.2e-45, Sum P(2) = 3.2e-45
Identities = 60/176 (34%), Positives = 98/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + ++ II G TG GKTTQ+PQ++ + + R C
Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAECNIV 441
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 442 VTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 499
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 500 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 555
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 296 (109.3 bits), Expect = 3.2e-45, Sum P(2) = 3.2e-45
Identities = 91/284 (32%), Positives = 137/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I T+Q E S ILPL+S + R EQ +VF P P G
Sbjct: 650 PGAVLVFLPGWNLI-YTMQKHLE--MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGV 706
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L + F + + PEM R+ L + +K L + I F A PPP
Sbjct: 767 RVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP KM++ + I TI+
Sbjct: 826 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIA 884
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A +++ G K L FA DHV L++++ +
Sbjct: 885 AATCFPEPFIN-EG--KRLGYIHRNFAGNRFSDHVALLSVFQAW 925
Score = 263 (97.6 bits), Expect = 3.2e-45, Sum P(2) = 3.2e-45
Identities = 60/176 (34%), Positives = 98/176 (55%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC--- 100
++R+ LPV K+ + IL + ++ II G TG GKTTQ+PQ++ + + R C
Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAECNIV 441
Query: 101 -TQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR++ +VA R Y++RFE + +I F T GVLLR++ +
Sbjct: 442 VTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--E 499
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+++ SATI+ +F
Sbjct: 500 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 555
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 484 (175.4 bits), Expect = 4.1e-45, P = 4.1e-45
Identities = 146/457 (31%), Positives = 236/457 (51%)
Query: 133 FEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQR 192
FE T T + FLT+G+LLR+M D LL KY+VI++DE HER +++D+L+GLL+ +
Sbjct: 153 FET-TKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCT 211
Query: 193 CRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYV 252
R DL+LI+ SATI +F G V++ RL P + V I
Sbjct: 212 KRDDLKLILMSATINLDLFKGYFE------GAPVVQVPGRLFP--IDVRWHPIKQFIDQS 263
Query: 253 EEPVSDYVQAAVSTVLLIHDKEPP----GDILVFLTGQDDIDATIQLLTEEARTSKKNSS 308
++ +L + DK+ P GD L+FL G A I ++ E + + ++
Sbjct: 264 DKKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGV----AEISMVAEHLKNYAELTN 319
Query: 309 GLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFY 368
G IIL L+S LS EQ++VF P G RK ++STN+AETS+T++GI +V+DSG +
Sbjct: 320 GWIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKH 379
Query: 369 NPISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNL 428
P + + L +SKAS CYRLY++E F K + + E+ R +L
Sbjct: 380 EPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEK-MDDFTVSEINRVSL 438
Query: 429 VSCVIQLKAL--GIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK--LT-SPTGFQ 483
+++ +L G+D F + P + + LEVL VL D LT + G
Sbjct: 439 QEMALKMISLNLGLDPRT-FPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNM 497
Query: 484 VAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAE 543
V+++P+E I+KM++ + E ++T++A LS+QS + + + E+ E + +
Sbjct: 498 VSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPL 557
Query: 544 GDHVTFLNIYKGF-LQSC---KSSHWCHKNFINYHAM 576
GD T ++I++ + LQ + W +N I+ H +
Sbjct: 558 GDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRL 594
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 296 (109.3 bits), Expect = 9.4e-45, Sum P(2) = 9.4e-45
Identities = 85/316 (26%), Positives = 156/316 (49%)
Query: 260 VQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART--------SKKNSSGLI 311
+ +T+ I PGDILVFL G +I + +L + + + ++S
Sbjct: 855 IDLVAATIAHIASSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFR 914
Query: 312 ILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPI 371
I L+S +S AEQ ++F P G R++++++NIAETS+T+ +V+VVD G ++ R Y+
Sbjct: 915 IHFLHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRS 974
Query: 372 SDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSC 431
+ I + +K+ Y LY+E+ + + + +PEM + +L +
Sbjct: 975 TRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRR-QSMKDDALPEMLKLDLTNT 1033
Query: 432 VIQLKALGI-DNILGFDWPA-SPPPEAMIR-ALEVLYSLGVLDDDAKLTSPTGFQVAEIP 488
+ +K G D++ F A SPPP ++++ A+ L ++ L ++ +TS G + IP
Sbjct: 1034 CLSVKGFGFRDSVADFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITS-LGHLLLRIP 1092
Query: 489 LEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVT 548
L P++ KMIL C +I + A+ S++ G+ A +F A+ DH++
Sbjct: 1093 LHPLLGKMILLGVFFRCVGPMIVLCALHGGGSLFEVPPGSPSAAKRAHQQFRVADSDHLS 1152
Query: 549 FLNIYKGFLQSCKSSH 564
+ + Q + SH
Sbjct: 1153 QMKAFNHLRQLEQISH 1168
Score = 260 (96.6 bits), Expect = 9.4e-45, Sum P(2) = 9.4e-45
Identities = 77/225 (34%), Positives = 114/225 (50%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV---IACT 101
QR LP+ K+R +L LVE I++G TGSGK+TQ+PQ + + G I C
Sbjct: 581 QRASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCL 640
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFED-FTNKDLTAIKFLTDGVLLREMMD-- 158
QPRR A VA R + IRF+ N+ + F+T G+LL+++ D
Sbjct: 641 QPRRAAAMWVAQRVASERGERLGESVGFRIRFDARLANRQGGTVSFVTLGILLKQLQDGV 700
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKK-----IQRCRSDLRLIISSATIEAKS--- 210
L YS I++DE HERS+ D+LL +LKK + + +S ++I+ SA+I +
Sbjct: 701 QETLDMYSHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQ 760
Query: 211 --MSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVE 253
++ H K RR L + P ILS+ GR F V Y++
Sbjct: 761 EYLADSLHDGKARR-LPAHQACP-----ILSIPGRTFPVSSIYLD 799
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 320 (117.7 bits), Expect = 1.3e-44, Sum P(3) = 1.3e-44
Identities = 89/301 (29%), Positives = 151/301 (50%)
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
ILVFL G A I+ L +E + G II L+S ++ EQE+ F P G RK+
Sbjct: 922 ILVFLPGM----AEIRRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKI 977
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXXXXX 398
VI+TNIAET +T+ I V+D+G K ++ + LV A IS+A+
Sbjct: 978 VIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQ 1037
Query: 399 XXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEA-- 456
C+ ++T+ + + PEM R +L V+++K + + A PP +
Sbjct: 1038 RGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKN 1097
Query: 457 MIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
+ RA++ L + L LT P G Q+A++PL+ + K+I+ C + I+I+A+L
Sbjct: 1098 IRRAIDALKEVKALTSTENLT-PLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAIL 1156
Query: 517 SIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGF--LQSCKSSH---WCHKNFI 571
S +S +V+ G+ + + +L F + D +T N Y + +S ++ +C KNF+
Sbjct: 1157 SCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFL 1216
Query: 572 N 572
+
Sbjct: 1217 S 1217
Score = 235 (87.8 bits), Expect = 1.3e-44, Sum P(3) = 1.3e-44
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IACTQ 102
+ R +LP++ ++ IL + +H II ETGSGK+TQIP ++ E G I T+
Sbjct: 640 QSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTE 699
Query: 103 PRRLAVQAVASRXXXXXXXX------XXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
PRR++ ++A R + +R E + T + F T GV++R M
Sbjct: 700 PRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSP-ATRLVFATTGVVVR-M 757
Query: 157 MDDPL-LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAF 214
++ P + +++DE HERSI +D LL +L+++ + R DL+LI+ SAT++A S +
Sbjct: 758 LERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTY 816
Score = 41 (19.5 bits), Expect = 1.3e-44, Sum P(3) = 1.3e-44
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 237 ILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLL 296
+L++ GR F V+ ++E+ + + D E D + AT++
Sbjct: 822 VLNIPGRTFPVETKFLEDAIELTQYRTTENESNVADDEYEDDAETSQGETTGVAATLENY 881
Query: 297 TEEARTSKKN 306
+++ R + N
Sbjct: 882 SKQTRETIMN 891
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 482 (174.7 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 151/514 (29%), Positives = 260/514 (50%)
Query: 98 IACTQPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMM 157
I TQPRR++ +A R Y IR E T T +L R +
Sbjct: 685 ILVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQV 744
Query: 158 -----DDPL--LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKS 210
+D + L S +++DE HERS+ TD LL +++ + + R DL+L++ SAT+++ +
Sbjct: 745 SGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSAT 804
Query: 211 MSAFFHARKGRRGLEGVELVPRLEPA-------ILSVEGRGFNVQIHYVEEPVSDYVQ-- 261
+++F + G R + VE+ R P ++ + G I +PV+ +Q
Sbjct: 805 FASYF-VQDGIR-VGQVEIAGRTFPVTDYYLDDVIRMTQFG-TANIRADADPVAKAIQNL 861
Query: 262 -AAVSTVLLIH-----DKE-----PPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGL 310
++ LL+ D E G IL+FL G +I+ +L ++ + L
Sbjct: 862 GTRINYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRACGML--------RSLNCL 913
Query: 311 IILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNP 370
+LPL++ L EQ +VF P P GKRKVV++TN+AETS+T++ I+ VVD+G K+ Y+
Sbjct: 914 HVLPLHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDA 973
Query: 371 ISDIENLVVAPISKASXXXXXXXXXXXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVS 430
+++ L S A+ +CY+LYT + ++ PEM+R L
Sbjct: 974 ANNMRRLEETFASLAACKQRRGRAGRVQAGECYKLYTRK-LESQMAERPEPEMRRVPLEQ 1032
Query: 431 CVIQLKALGIDNILGFDWPASPPPEAMI--RALEVLYSLGVLDDDAKLTSPTGFQVAEIP 488
+ ++A+GI ++ GF A PPEA A+ +L +G LD + +LT+ G Q+A IP
Sbjct: 1033 LCLSVRAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTA-LGRQLAAIP 1090
Query: 489 LEPMISKMILSSNELGCSEEIITISAVLSI-QSIWVSGRGAQKELDEAKLRFAAAEGDHV 547
+ K+++ GC E+ ++++A+LS + ++VS + + EA+ RFAA +GD +
Sbjct: 1091 ADLRCGKLMVYGAVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLL 1150
Query: 548 TFLNIYKGF---LQ--SCKSSH---WCHKNFINY 573
T L ++ + ++ S + H +C NF++Y
Sbjct: 1151 TDLRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSY 1184
Score = 284 (105.0 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 89/292 (30%), Positives = 147/292 (50%)
Query: 45 QRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG-GRV--IACT 101
QRQ+LP + R I+ V H TII GETGSGK+TQ Q++ + + G G I T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREM----- 156
QPRR++ +A R Y IR E T T I F+T GVLLR +
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPK-TRITFVTTGVLLRRLQVSGG 747
Query: 157 -MDDPL--LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSA 213
++D + L S +++DE HERS+ TD LL +++ + + R DL+L++ SAT+++ + ++
Sbjct: 748 RVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFAS 807
Query: 214 FFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+F + G R V ++E + GR F V +Y+++ + T + D
Sbjct: 808 YF-VQDGIR-------VGQVE-----IAGRTFPVTDYYLDDVIR---MTQFGTANIRADA 851
Query: 274 EPPGDILVFLTGQDDIDA---TIQLLTEEARTSKKNSSGLIILPLYSGLSRA 322
+P + L + + + T + + E ++K+ LI LP + ++RA
Sbjct: 852 DPVAKAIQNLGTRINYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRA 903
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 297 (109.6 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 90/284 (31%), Positives = 138/284 (48%)
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
PG +LVFL G + I A + L S ILPL+S + R EQ +VF P P G
Sbjct: 652 PGAVLVFLPGWNLIYAMQKHLEMNPHFG---SHSYCILPLHSQIPRDEQRKVFDPVPDGI 708
Query: 336 RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASXXXXXXXXX 395
KV++STNIAETS+T+ +VYV+DS K + + +++ N SK +
Sbjct: 709 IKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 396 XXXXXKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA-SPPP 454
C+ L ++ F K + PE+ R+ L + +K L + I F A PPP
Sbjct: 769 RVRPGFCFHLCSKARFDK-LETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPP 827
Query: 455 -EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITIS 513
+A+I A L L LD + +LT P G +A++P+EP + KM++ + + TIS
Sbjct: 828 LDAVIEAEHTLRELDALDSNDELT-PLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTIS 886
Query: 514 AVLSIQSIWVSGRGAQKELDEAKLRFAAAE-GDHVTFLNIYKGF 556
A ++S G + L FA DHV L++++ +
Sbjct: 887 AATCFPEPFIS-EG--RRLGYVHRNFAGNRFSDHVALLSVFQAW 927
Score = 257 (95.5 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 61/174 (35%), Positives = 93/174 (53%)
Query: 46 RQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC----T 101
R+ LPV K+ I++ V II G TG GKTTQ+PQY+ + + R C T
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDE-YIRNDRAAQCNIVVT 445
Query: 102 QPRRLAVQAVASRXXXXXXXXXXXXXXYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR++ +VA R Y++RFE + ++ F T GVLLR++
Sbjct: 446 QPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLESG-- 503
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF 215
+ S ++VDE HER I+TD LL +L+ + + ++R+I+ SATI+ +F
Sbjct: 504 IRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYF 557
Score = 46 (21.3 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 1 MSQFWKPGAEKPRLLDDEEGG 21
M+QF P +K + DEEGG
Sbjct: 583 MTQFIPPPRDKKKKDKDEEGG 603
Score = 43 (20.2 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 237 ILSVEGRGFNVQIHYVEE 254
I+ V GR F VQ +Y+E+
Sbjct: 562 IIEVFGRTFPVQEYYLED 579
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 584 538 0.00094 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 613 (65 KB)
Total size of DFA: 284 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.39u 0.10s 42.49t Elapsed: 00:00:02
Total cpu time: 42.46u 0.10s 42.56t Elapsed: 00:00:02
Start: Sat May 11 07:02:35 2013 End: Sat May 11 07:02:37 2013
WARNINGS ISSUED: 2