BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007931
(584 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 608 bits (1567), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/581 (52%), Positives = 404/581 (69%), Gaps = 17/581 (2%)
Query: 3 QFWKPGAEKPRLLDDEEGGVVFLSSSLSSASSIGYG-YA--SIEKQRQRLPVYKYRTAIL 59
+FW+PG E P + EE S + +S +++ Y YA SIE+QRQ+LPV+K R IL
Sbjct: 9 KFWRPGTEGPGVSISEERQ----SLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHIL 64
Query: 60 YLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEM 119
YL+E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA RVAEE
Sbjct: 65 YLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEER 124
Query: 120 GVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIS 179
G +G EVGY IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAHER++
Sbjct: 125 GAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLY 184
Query: 180 TDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILS 239
TDI +GLLKKIQ+ R DLRLI++SAT++A FF+ + R IL+
Sbjct: 185 TDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDP-------ARDTCVILT 237
Query: 240 VEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEE 299
VEGR F V I Y++ PV DY+++ V TV+ IH E GD+L FLTGQ++++ + +L E+
Sbjct: 238 VEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQ 297
Query: 300 ARTSKKN--SSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYV 357
AR + L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIVYV
Sbjct: 298 ARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYV 357
Query: 358 VDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPA 417
+D GF K R YNP + IE LVV P+S+ASA QRAGR GR R GKCYRLYTEE F K +P
Sbjct: 358 IDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQ 416
Query: 418 EGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLT 477
+PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +LT
Sbjct: 417 STVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLT 476
Query: 478 SPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKL 537
P G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V +
Sbjct: 477 EPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHR 536
Query: 538 RFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+FA EGDH+T LNIY+ F++ K S WC ++F+NY +VR
Sbjct: 537 KFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVR 577
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/583 (51%), Positives = 406/583 (69%), Gaps = 17/583 (2%)
Query: 1 MSQFWKPGAEKPRLLDDEEGGVVFLSSSLSSASSIGYG-YA--SIEKQRQRLPVYKYRTA 57
+ +FW+PG E P + EE S + +S +++ Y YA SIE+QRQ+LPV+K R
Sbjct: 7 LVKFWRPGTEGPGVSISEERQ----SLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNH 62
Query: 58 ILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAE 117
ILYL+E + T +IVGETG GK+TQIPQYL EAGW GRV+ TQPRR+A VA RVAE
Sbjct: 63 ILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAE 122
Query: 118 EMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERS 177
E G +G EVGY IRF+D T++ T IKFLTDG+L+REMM DPLLTKYSVIM+DEAHER+
Sbjct: 123 ERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERT 182
Query: 178 ISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAI 237
+ TDI +GLLKKIQ+ R DLRLI++SAT++A FF+ + R I
Sbjct: 183 LYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDP-------ARDTCVI 235
Query: 238 LSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLT 297
L+V GR F V I Y++ PV DY+++ V TV+ IH E GDIL FLTGQ++++ + +L
Sbjct: 236 LTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLI 295
Query: 298 EEARTSKKN--SSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIV 355
E+AR + L +LP+Y+GL EQ +VF R RKV+++TN+AETS+T+ GIV
Sbjct: 296 EQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIV 355
Query: 356 YVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEI 415
YV+D GF K R YNP + IE LVV P+S+ASA QRAGR GR R GKCYRLYTEE F K +
Sbjct: 356 YVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-L 414
Query: 416 PAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAK 475
P +PEMQRSNL ++QLKALGIDN+L F + + PP ++M++ALE+LY+LG LD D +
Sbjct: 415 PQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCR 474
Query: 476 LTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEA 535
LT P G ++AE PL PM +KM+L S GCS+EI++I+A++ IQ+I+V + +
Sbjct: 475 LTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRV 534
Query: 536 KLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+FA EGDH+T LN+Y+ F++ K+S WC ++F+NY +VR
Sbjct: 535 HRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVR 577
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/553 (49%), Positives = 388/553 (70%), Gaps = 23/553 (4%)
Query: 29 LSSASSIGYGYA---SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQY 85
++ S I YG A SI++QR+ LP++ R A L V H +++GETGSGKTTQ+ QY
Sbjct: 485 VTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQY 544
Query: 86 LKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIK 145
L EAG+ G+ I CTQPRR+A +V+ RVAEE G ++G+EVGY IRFED T+ + T IK
Sbjct: 545 LAEAGYGTRGK-IGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPE-TIIK 602
Query: 146 FLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSAT 205
F+TDG+LLRE + DP L+ YSVI++DEAHER+ISTD+L GLLK+ + R +L+++I+SAT
Sbjct: 603 FMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSAT 662
Query: 206 IEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVS 265
+EA+ S +F + + + GR F V I Y ++P +DY+ A++
Sbjct: 663 LEAEKFSKYF-----------------MNAQLFIIPGRTFPVDIRYTKDPEADYLDASLI 705
Query: 266 TVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQE 325
TV+ IH EPPGDIL+FLTGQ++IDA Q+L E ++ N LIILP+YS L Q
Sbjct: 706 TVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQT 765
Query: 326 QVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKA 385
++F P P G RKVVI+TNIAETSLT++GI YV+D GFSKQ+ +NP + +++LVVAPIS+A
Sbjct: 766 KIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQA 825
Query: 386 SARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILG 445
+ARQR+GRAGR PGKCYRLYTE F E+ A IPE+QR+NL + V+ +KA+GI+++L
Sbjct: 826 AARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLN 885
Query: 446 FDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGC 505
FD+ PP + ++ A+E LYSLG LD++ LT G ++AE PL+P +SKM+++S +LGC
Sbjct: 886 FDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLIASVDLGC 944
Query: 506 SEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHW 565
S+EI+T+ A+LS+Q+++ + Q D+ K +F EGDH+T LN+Y+ + S S+ W
Sbjct: 945 SDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPW 1004
Query: 566 CHKNFINYHAMVR 578
C +NF+ ++ R
Sbjct: 1005 CFENFVQARSLRR 1017
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 543 bits (1400), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/543 (49%), Positives = 376/543 (69%), Gaps = 12/543 (2%)
Query: 37 YGYASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR 96
Y +I++QR RLP++K R ILY+ E + T IIVGETG GK+TQ+PQ+L EAGWA GR
Sbjct: 65 YASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGR 124
Query: 97 VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
I TQPRR+AV +A+RVAEE +G +VGYT+RF+D ++KD T +KF+TDG+LLRE+
Sbjct: 125 QIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD-TKVKFMTDGLLLREI 183
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
+ DPLL+KYS+IM+DEAHERS +TDILLGLL+KI + R+DLR+I+SSAT++A+ FF
Sbjct: 184 LADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFE 243
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP 276
+ + I+SVEGR V +H+ + V DY Q+AV TV+ IH E P
Sbjct: 244 MNETGNSDKDTA-------GIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENP 296
Query: 277 GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKR 336
GDILVFLTGQD+++ + L E A + KN L ++P Y L EQ + F TP G R
Sbjct: 297 GDILVFLTGQDEVEDVCEKLRELA-GNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTR 355
Query: 337 KVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGR 396
KVV++TNIAE S+T+ GI YV+D+G+ K R + + +E L+ +SKASA QRAGRAGR
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGR 415
Query: 397 VRPGKCYRLYTEEYFVKEIPAEG-IPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPE 455
+RPGKCYRLY E F E AEG +PE+QR + S ++QLKALG+ N+ F + + PP
Sbjct: 416 IRPGKCYRLYPESEF--ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSW 473
Query: 456 AMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAV 515
AMI LE+LY+LG +D+ ++LTSP G Q+AE PL PM SK +L S E GCS E++TI A+
Sbjct: 474 AMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAM 533
Query: 516 LSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHA 575
+ IQ ++++ + + D + +FA EGDH+T LN++ F+++ +S WC +F+NY
Sbjct: 534 MQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRG 593
Query: 576 MVR 578
++R
Sbjct: 594 LMR 596
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/538 (50%), Positives = 371/538 (68%), Gaps = 20/538 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI++QR+ LP+YK + ++ V + +++GETGSGKTTQ+ QYL EAG+ G+ I C
Sbjct: 507 SIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGC 565
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RVAEE G ++GEEVGY IRFED T D T IK++TDG+LLRE++ D
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILIDE 624
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L++YSVIM+DEAHER+I TD+L GLLKK+ + R DLRLI++SAT++A+ S +F
Sbjct: 625 NLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF----- 679
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
I ++ GR F V+I Y ++P +DY+ AA+ TVL IH EP GDIL
Sbjct: 680 ------------FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDIL 727
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++ID+ Q L E + KN LIILP+YS L Q ++F P P GKRKVV+
Sbjct: 728 VFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVV 787
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAE SLT++GI YVVD GF+KQ YNP +E+LV+ PIS+ASA+QRAGRAGR PG
Sbjct: 788 ATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPG 847
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KCYRLYTE + E+P IPE+QR NL + +KA+GI+++L FD+ P P+A+I A
Sbjct: 848 KCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISA 907
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
+E LYSLG LD++ LT G ++AE PLEP +SKM+L+S +LGCS+EI+T+ A++ +
Sbjct: 908 MEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN 966
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
I+ R Q + D+ + +F EGDH+T L +Y+ + S WC +NFI ++ R
Sbjct: 967 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRR 1024
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/538 (49%), Positives = 374/538 (69%), Gaps = 20/538 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI +QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I C
Sbjct: 581 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGC 639
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RV+EE G +G+EVGYTIRFED T+ + T IK++TDG+LLRE + DP
Sbjct: 640 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDP 698
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
LT+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 699 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY---- 754
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDIL
Sbjct: 755 -------------EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDIL 801
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++ID ++L E ++ + LIILP+YS L Q ++F P P G RKVVI
Sbjct: 802 VFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVI 861
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT++GI YVVD GF KQ+ YN + I+ LVV PIS+A A+QRAGRAGR PG
Sbjct: 862 ATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPG 921
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KCYRLYTE + E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A
Sbjct: 922 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 981
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
+E LY+LG LDD+ LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+
Sbjct: 982 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1040
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ + Q D+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1041 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1098
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 540 bits (1390), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/538 (49%), Positives = 374/538 (69%), Gaps = 20/538 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI +QR+ LP+YK + ++ V + I++GETGSGKTTQI QYL EAG+ G+ I C
Sbjct: 557 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGC 615
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RV+EE G +G+EVGYTIRFED T+ + T IK++TDG+LLRE + DP
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPE-TVIKYMTDGMLLRECLIDP 674
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
LT+Y++IM+DEAHER+I TD+L GLLKK + R D++LI++SAT++A S +F+
Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY---- 730
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
E I ++ GR + V+I Y +EP +DY+ A++ TV+ IH EPPGDIL
Sbjct: 731 -------------EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDIL 777
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++ID ++L E ++ + LIILP+YS L Q ++F P P G RKVVI
Sbjct: 778 VFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVI 837
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT++GI YVVD GF KQ+ YN + I+ LVV PIS+A A+QRAGRAGR PG
Sbjct: 838 ATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPG 897
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KCYRLYTE + E+ +PE+QR+NL S V+ LKA+GI+++L FD+ +PP E +I A
Sbjct: 898 KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA 957
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
+E LY+LG LDD+ LT G ++AE PLEPM+ KM++ S LGCSEE++TI ++LS+Q+
Sbjct: 958 MEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1016
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ + Q D+ K +F EGDH+T L +Y + + S+ WC++NFI ++ R
Sbjct: 1017 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1074
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/549 (48%), Positives = 381/549 (69%), Gaps = 22/549 (4%)
Query: 33 SSIGYGYA---SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA 89
++I YG S+++QR+ LPV+K R L V + +++GETGSGKTTQI QYL E
Sbjct: 491 ANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEE 550
Query: 90 GWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTD 149
G+ ++I CTQPRR+A +VA RVAEE+G +VGEEVGYTIRFED T++ +T IK++TD
Sbjct: 551 GYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR-MTQIKYMTD 609
Query: 150 GVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAK 209
G+L RE + DPLL+KYSVI++DEAHER+++TD+L GLLK R DL+LI++SAT++A+
Sbjct: 610 GMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAE 669
Query: 210 SMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLL 269
S++F+ + I ++ GR + V+I Y ++P +DY+ AA+ TV+
Sbjct: 670 RFSSYFY-----------------KCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQ 712
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
IH E PGDILVFLTGQ++ID + ++L E ++ + L+ILP+YS L Q ++F
Sbjct: 713 IHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFE 772
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
P P G RKVVI+TNIAETSLT++GI YVVD GF KQ ++P +++L+V PIS+A ARQ
Sbjct: 773 PAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQ 832
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
R+GRAGR PGKCYRLYTE + E+ IPE+QR NL ++ LKA+GI+++L FD+
Sbjct: 833 RSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFM 892
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP + MI AL+ LY+L LDD+ LT P G ++A+ P+EP +SK++++S ELGCSEE+
Sbjct: 893 DPPPAQTMIAALQNLYALSALDDEGLLT-PLGRKMADFPMEPQLSKVLITSVELGCSEEM 951
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I A+LS+ +IW R Q+E D + +FA E DH+T LN+Y + + S +WC+++
Sbjct: 952 LSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEH 1011
Query: 570 FINYHAMVR 578
+I M R
Sbjct: 1012 YIQARGMRR 1020
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/538 (49%), Positives = 370/538 (68%), Gaps = 20/538 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
S+ +QR+ LP++ + ++ + + ++VGETGSGKTTQ+ QY EAG G+ I C
Sbjct: 532 SMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGC 590
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RVAEE G K+G +VGYTIRFED T++D T IK++TDG+LLRE + DP
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TIIKYMTDGMLLRECLIDP 649
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L+ YS+IM+DEAHER+I TD+L GLLK R R +L+LII+SAT+++ S +F
Sbjct: 650 DLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYF----- 704
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
LE I ++ GR F V+I Y EP SDY++AA TV+ IH EPPGD+L
Sbjct: 705 ------------LEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVL 752
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++ID + ++L E ++ + LIILP+Y L Q ++F P P GKRKVVI
Sbjct: 753 VFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVI 812
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT++GI YVVD GF KQ+ YNP S +++LVV PIS+A+A+QR+GRAGR PG
Sbjct: 813 ATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPG 872
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KCYRLYTE F E+ +PE+QR+NL S ++QLKA+GI+N++ FD+ +PP ++MI A
Sbjct: 873 KCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITA 932
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
L L++L LD D LT G ++AE PLEP +SK+++ S +LGCSEE++TI A+L++Q+
Sbjct: 933 LNTLHTLSALDGDGLLTK-LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN 991
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
I+ + Q D+ K +F EGDH+T L +Y + S WC +NFI +M R
Sbjct: 992 IFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/550 (48%), Positives = 375/550 (68%), Gaps = 31/550 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADG---G 95
Y I ++R+ LPV+ + L + ++ T I+VGETGSGKTTQIPQ++ +A AD G
Sbjct: 55 YFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKG 114
Query: 96 R--VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLL 153
R ++ CTQPRR+A +V+ RVA+EM V +GEEVGY+IRFED T+ T +K+LTDG+LL
Sbjct: 115 RKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSR-TMLKYLTDGMLL 173
Query: 154 REMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSA 213
RE M DPLL +Y VI++DEAHER+++TD+L GLLK++ R R DL+L++ SAT+EA+
Sbjct: 174 REAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQE 233
Query: 214 FFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDK 273
+F ++ V GR V+I Y +EP DY++AA+ TV+ IH
Sbjct: 234 YFSG-----------------APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
Query: 274 EPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTP- 332
EPPGDILVFLTG+++I+ + + +E + ++PLYS L A Q+++F P P
Sbjct: 277 EPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPV 336
Query: 333 ------RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKAS 386
RK+V+STNIAETSLT++GIVYV+D GF+KQ+ YNP +E+L+V+PISKAS
Sbjct: 337 PLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 396
Query: 387 ARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGF 446
A QR+GRAGR RPGKC+RLYTE+ F ++ + PE+ RSNL + V+ LK LGID+++ F
Sbjct: 397 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
Query: 447 DWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCS 506
D+ P PE ++RALEVL LG LDD+ LT TG ++E PL+P +SKM++ S E CS
Sbjct: 457 DFMDPPAPETLMRALEVLNYLGALDDEGNLTK-TGEIMSEFPLDPQMSKMLIVSPEFNCS 515
Query: 507 EEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWC 566
EI+++SA+LS+ + +V R AQK DEAK RF +GDH+T LN+Y + Q+ + +WC
Sbjct: 516 NEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWC 575
Query: 567 HKNFINYHAM 576
+NF+N AM
Sbjct: 576 FENFVNNRAM 585
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/539 (47%), Positives = 369/539 (68%), Gaps = 20/539 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI+ R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ + G IAC
Sbjct: 394 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC 453
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA+RVA EMGVK+G EVGY+IRFED T+ + T ++++TDG+LLRE + +P
Sbjct: 454 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEP 512
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L YSV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 513 DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFD---- 568
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
+ + + GR F V I Y + P +DY++A V +VL IH +PPGDIL
Sbjct: 569 -------------DAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 615
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++I+A ++L + R L++LP+Y+ L Q ++F PTP G RKVV+
Sbjct: 616 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 675
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT+EGI+YV+D GF KQ+ YNP + +E+L V P SKASA QRAGRAGRV G
Sbjct: 676 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 735
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KC+RLYT + E+ +PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ A
Sbjct: 736 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 795
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-Q 519
LE LY+LG L+ +LT+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+
Sbjct: 796 LEQLYALGALNHLGELTT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNN 854
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
SI+ + D A++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 855 SIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 913
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/539 (47%), Positives = 369/539 (68%), Gaps = 20/539 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI+ R+ LPV+ +R +L + H II GETGSGKTTQIPQYL E G+ + G IAC
Sbjct: 391 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC 450
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA+RVA EMGVK+G EVGY+IRFED T+ + T ++++TDG+LLRE + +P
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEP 509
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L YSV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 510 DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFD---- 565
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
+ + + GR F V I Y + P +DY++A V +VL IH +PPGDIL
Sbjct: 566 -------------DAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 612
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++I+A ++L + R L++LP+Y+ L Q ++F PTP G RKVV+
Sbjct: 613 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 672
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT+EGI+YV+D GF KQ+ YNP + +E+L V P SKASA QRAGRAGRV G
Sbjct: 673 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 732
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KC+RLYT + E+ +PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ A
Sbjct: 733 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 792
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-Q 519
LE LY+LG L+ +LT+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+
Sbjct: 793 LEQLYALGALNHLGELTT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNN 851
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
SI+ + D A++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 852 SIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 910
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/539 (47%), Positives = 368/539 (68%), Gaps = 20/539 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI+ R+ LPV+ +R +L V H II GETGSGKTTQIPQYL E G+ G IAC
Sbjct: 395 SIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIAC 454
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA+RVA EMGVK+G EVGY+IRFED T+ + T ++++TDG+LLRE + +P
Sbjct: 455 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS-ERTVLRYMTDGMLLREFLSEP 513
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L YSV+MVDEAHER++ TDIL GL+K + R R +L+++++SAT++ S FF
Sbjct: 514 DLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD---- 569
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
+ + + GR F V I Y + P +DY++A V +VL IH +PPGDIL
Sbjct: 570 -------------DAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 616
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ++I+A ++L + R L++LP+Y+ L Q ++F PTP G RKVV+
Sbjct: 617 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 676
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT+EGI+YV+D GF KQ+ YNP + +E+L V P SKASA QRAGRAGRV G
Sbjct: 677 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 736
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KC+RLYT + E+ +PE+QR++L + V+ LK+LGI +++ FD+ PP E ++ A
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-Q 519
LE LY+LG L+ +LT+ +G ++AE+P++PM+SKMIL+S + CSEEI+T++A+LS+
Sbjct: 797 LEQLYALGALNHLGELTT-SGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNN 855
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
SI+ + D A++ F GDH+ LN+Y + +S SS WC++NF+ + +M R
Sbjct: 856 SIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/586 (44%), Positives = 391/586 (66%), Gaps = 28/586 (4%)
Query: 2 SQFWKPGAEKPRLLDDEEGGVVFL-SSSLSSASSIGYGY-------ASIEKQRQRLPVYK 53
+++ PG ++ + DE + FL + LS+ + + S+E R+ LPVY+
Sbjct: 363 NEWLPPGEKQFDFVFDESQQIDFLLDTKLSAENPVDTDKMTDVKVEKSLESSRKSLPVYQ 422
Query: 54 YRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVAS 113
Y+ +L + + +IV ETGSGKTTQ+PQ+L EAG+ G + I CTQPRR+A +VA+
Sbjct: 423 YKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAA 482
Query: 114 RVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEA 173
RVA+EM V++G+EVGY+IRFE+ T++ T IK+LTDG+LLRE + +P L YSVI++DEA
Sbjct: 483 RVAKEMDVRLGQEVGYSIRFENATSEK-TVIKYLTDGMLLREFLTEPDLASYSVIIIDEA 541
Query: 174 HERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRL 233
HER++ TDIL GL+K I R R DL+++ISSATI+A+ SA+F
Sbjct: 542 HERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFD----------------- 584
Query: 234 EPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATI 293
E + V GR + V I+Y +P ++Y+QAA++T+L IH +P GDILVFLTGQD+I+
Sbjct: 585 EAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMS 644
Query: 294 QLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEG 353
+ + E R K +I+ P+Y+ L Q ++F PTP G RKVV++TNIAETS+T++G
Sbjct: 645 ENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDG 704
Query: 354 IVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVK 413
+ +V+DSGF KQ YNP + +E+LV P S+ASA QRAGRAGRV PGKC+RLYT +
Sbjct: 705 VNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNN 764
Query: 414 EIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDD 473
E+ PE+QR+NL + V+ LK+LGI+N+L FD+ +PPPE ++R+LE+LY+LG L++
Sbjct: 765 ELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNR 824
Query: 474 AKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL-SIQSIWVSGRGAQKEL 532
+LT G Q+AE P +PM+SK +++S++ GC EE+++I ++L S++ + E
Sbjct: 825 GELTK-LGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEA 883
Query: 533 DEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
D+A+ F GDH+T L+I+ ++ + S +W +NF+ Y ++ R
Sbjct: 884 DKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCR 929
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/548 (47%), Positives = 376/548 (68%), Gaps = 28/548 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--R 96
Y I K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R
Sbjct: 127 YYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKR 186
Query: 97 VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
+ACTQPRR+A +VA RVA+EM V +G+EVGY+IRFED ++ T +K++TDG+LLRE
Sbjct: 187 GVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREA 245
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+DPLL +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 246 MNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF- 304
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH-DKEP 275
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E
Sbjct: 305 -----------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEE 348
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GD+L+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 336 ------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKASA+Q
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
RAGRAGR RPGKC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFM 528
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+
Sbjct: 529 DPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEV 587
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I+A+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ N
Sbjct: 588 LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDN 647
Query: 570 FINYHAMV 577
FINY +++
Sbjct: 648 FINYRSLM 655
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/548 (47%), Positives = 376/548 (68%), Gaps = 28/548 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--R 96
Y I K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R
Sbjct: 127 YYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKR 186
Query: 97 VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
+ACTQPRR+A +VA RVA+EM V +G+EVGY+IRFED ++ T +K++TDG+LLRE
Sbjct: 187 GVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREA 245
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+DPLL +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 246 MNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF- 304
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH-DKEP 275
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E
Sbjct: 305 -----------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEE 348
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GD+L+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 336 ------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKASA+Q
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
RAGRAGR RPGKC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFM 528
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+
Sbjct: 529 DPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEV 587
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I+A+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ N
Sbjct: 588 LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDN 647
Query: 570 FINYHAMV 577
FINY +++
Sbjct: 648 FINYRSLM 655
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/548 (47%), Positives = 376/548 (68%), Gaps = 28/548 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGG--R 96
Y I K+R +LPV++Y+ ++ H + ++VGETGSGKTTQIPQ+ E + G R
Sbjct: 127 YYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKR 186
Query: 97 VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
+ACTQPRR+A +VA RVA+EM V +G+EVGY+IRFED ++ T +K++TDG+LLRE
Sbjct: 187 GVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK-TILKYMTDGMLLREA 245
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+DPLL +Y VI++DEAHER+++TDIL+G+LK++ R RSDL++I+ SAT++A +F
Sbjct: 246 MNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYF- 304
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH-DKEP 275
+ P +L++ GR V+I Y EP DY++AA+ TV+ IH +E
Sbjct: 305 -----------DNCP-----LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEE 348
Query: 276 PGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGK 335
GD+L+FLTGQ++ID + + E + I+PLYS L +Q+++F P P K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 336 ------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+L+V ISKASA+Q
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
RAGRAGR RPGKC+RLYTE+ + E+ PE+ RSNL S V+QLK LGID+++ FD+
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFM 528
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE ++RALE+L L L+DD LT G +AE PL+P ++KM+++S + CS E+
Sbjct: 529 DPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIASCDYNCSNEV 587
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++I+A+LS+ +V A+K DEAK+RFA +GDH+T LN+Y F Q+ +S WC+ N
Sbjct: 588 LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDN 647
Query: 570 FINYHAMV 577
FINY +++
Sbjct: 648 FINYRSLM 655
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/540 (47%), Positives = 367/540 (67%), Gaps = 21/540 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SIE+ R+ LPVY +R A + V+ H II GETGSGKTTQ+PQYL EAG+ +GG+ I C
Sbjct: 356 SIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGC 415
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA+RVA+E+G K+G +VGY+IRFED T++ T +K++TDG+LLRE +++P
Sbjct: 416 TQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEK-TVLKYMTDGMLLREFLNEP 474
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L YSV+M+DEAHER++ TDIL GL+K I R R DL+L+ISSAT++A+ S+FF
Sbjct: 475 DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD---- 530
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGDI 279
+ I + GR F V I+Y + P +DYV AA+ T++ IH +P PGDI
Sbjct: 531 -------------DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDI 577
Query: 280 LVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVV 339
LVFLTGQ++I+ + L E ++ LI LP+Y+ L Q ++F PTP+ RKVV
Sbjct: 578 LVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVV 637
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRP 399
++TNIAETS+T++GI YV+D GFSKQ ++ S +E+L V ISKA+A QRAGRAGR P
Sbjct: 638 LATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGP 697
Query: 400 GKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
GKC+RLYT + E+ + IPE+QR+NL + V+ LK+LGI +++ FD+ PP E ++
Sbjct: 698 GKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVI 757
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
ALE LY+LG L+ +LT G ++AE P +P +SKMI++S + CSEEI+TI+A+LS
Sbjct: 758 ALEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCN 816
Query: 520 -SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+++ + D A+ F + GDH+T +N+Y + +S S WC +N++ + M R
Sbjct: 817 AAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKR 876
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/568 (46%), Positives = 380/568 (66%), Gaps = 32/568 (5%)
Query: 18 EEGGVVFLSSSLSSASSIGYGYASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSG 77
EEG F + S + Y I + R+ LPVY+ R L + + + VGETGSG
Sbjct: 49 EEGPNNFFNDKPFSQN-----YFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSG 103
Query: 78 KTTQIPQY-LKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDF 136
KTTQIPQ+ L + IACTQPRR+A +VA RVA+EM V +GEEVGY IRFED
Sbjct: 104 KTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDC 163
Query: 137 TNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD 196
+ + T +K++TDG+LLRE M D +L++YS I++DEAHER+++TDIL+GL+K++ R D
Sbjct: 164 SGPN-TLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPD 222
Query: 197 LRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPV 256
L++I+ SAT++AK +F + +L+V GR + V+I+Y +EP
Sbjct: 223 LKIIVMSATLDAKKFQKYF-----------------FDAPLLAVPGRTYPVEIYYTQEPE 265
Query: 257 SDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEART-SKKNSSG-LIILP 314
DY++AA+ TVL IH +E PGDILVFLTG+++I+ + +T EA ++ ++G L + P
Sbjct: 266 RDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYP 325
Query: 315 LYSGLSRAEQEQVFSPTPRGK-----RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYN 369
LY L +Q+++F PTP RKVVISTNIAETSLT++GIVYVVD GFSKQ+ YN
Sbjct: 326 LYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYN 385
Query: 370 PISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLV 429
P +E+L+V+PISKASA+QRAGRAGR RPGKC+RLYTEE F KE+ + PE+ RSNL
Sbjct: 386 PRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLS 445
Query: 430 SCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPL 489
S V++LK LGID+++ FD+ P PE M+RALE L L LDD+ LT P G + +E PL
Sbjct: 446 STVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLT-PLGRKASEFPL 504
Query: 490 EPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTF 549
+P ++ M++ S E CS E+++++A+LS+ +++V A+K DE + +F +GDH+T
Sbjct: 505 DPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTL 564
Query: 550 LNIYKGFLQSCKSSHWCHKNFINYHAMV 577
LN+Y + ++ WC +F+++ A++
Sbjct: 565 LNVYHAYKSGEGTADWCWNHFLSHRALI 592
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/548 (46%), Positives = 364/548 (66%), Gaps = 23/548 (4%)
Query: 34 SIGYGYAS---IEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAG 90
SI YG + I QRQ LPVY R+ ++ V + +IVGETGSGKTTQI QYL E G
Sbjct: 465 SISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEG 524
Query: 91 WADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDG 150
+++ G +I CTQPRR+A +VA RVAEE+G KVG +VGYTIRFED T D T IK++TDG
Sbjct: 525 FSNYG-MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TRIKYMTDG 582
Query: 151 VLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKS 210
+L RE + DP ++KYSVIM+DEAHER+++TD+L LLKK R +L++I++SAT+ +
Sbjct: 583 MLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAK 642
Query: 211 MSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLI 270
S +F L I+++ G+ F V++ Y + P DY++AA+ V+ I
Sbjct: 643 FSEYF-----------------LNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDI 685
Query: 271 HDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSP 330
H E PGDILVFLTGQ++ID+ ++L + +T + L+ILP+YS L Q ++F P
Sbjct: 686 HINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEP 745
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQR 390
TP+G RKVV +TNIAETS+T++GI YVVD GF+K YN + IE L+V+PIS+A A QR
Sbjct: 746 TPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQR 805
Query: 391 AGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
GRAGR PGKCYRLYTE F E+ +PE+QR NL ++ LKA+GI+++L FD+
Sbjct: 806 KGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMD 865
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
PP M+ AL LY L LDD+ KLT+ G +++ P++P +S+ +LSS + CS+EI+
Sbjct: 866 PPPKNLMLNALTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLLSSVDNQCSDEIV 924
Query: 511 TISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNF 570
TI ++LS+Q+++ + Q E D K +F GDH+T LN+Y + Q+ S +C NF
Sbjct: 925 TIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNF 984
Query: 571 INYHAMVR 578
+++ + R
Sbjct: 985 LHFRHLKR 992
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/552 (46%), Positives = 369/552 (66%), Gaps = 33/552 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKE-------AGW 91
Y +I ++R +LPV++Y+ + L+ + +VGETGSGKTTQIPQ+ E
Sbjct: 66 YWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQP 125
Query: 92 ADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGV 151
R++ACTQPRR+A +VA+RVAEEM V +G+EVGY+IRFED + + T +K+ TDG+
Sbjct: 126 PGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCIS-ERTVLKYCTDGM 184
Query: 152 LLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSM 211
LLRE M+ PLL KY V+++DEAHER+++TDIL+GL+K+I R R+D++++I SAT++A
Sbjct: 185 LLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKF 244
Query: 212 SAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH 271
+F + +LSV GR F V+I + DY++AA+ TV+ IH
Sbjct: 245 QRYFE-----------------DCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIH 287
Query: 272 D-KEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSP 330
+E GDIL+FLTGQ++I+ + + E + ++ L +PLYS L A Q+++F P
Sbjct: 288 MVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEP 347
Query: 331 TPRGK------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISK 384
P + RK VISTNIAETSLT++G+V+V+D GFSKQ+ YNP +E+L+V PISK
Sbjct: 348 APPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK 407
Query: 385 ASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNIL 444
ASA QRAGRAGR +PGKC+RLYTE + E+ + PE+ RSNL S V+QLK LG ++++
Sbjct: 408 ASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLV 467
Query: 445 GFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELG 504
FD+ P PE ++RALE+L L ++DD +LT G +AE PL+P ++KM+++S EL
Sbjct: 468 HFDFMDPPAPETLMRALELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITSTELN 526
Query: 505 CSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH 564
CS EI++I+A+LS+ WV + E DEAK RFA +GDH+T LN+Y F Q+ +
Sbjct: 527 CSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQ 586
Query: 565 WCHKNFINYHAM 576
WC+ NFINY M
Sbjct: 587 WCYDNFINYRTM 598
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/539 (47%), Positives = 364/539 (67%), Gaps = 21/539 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
+I++ R+ LPVY YR ++ V + IIVGETGSGKTTQIPQYL EAG++ G+ I C
Sbjct: 459 TIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK-IGC 517
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA+RVAEE+G K+G EVGY+IRFED T++ T ++++TDG+L+RE + P
Sbjct: 518 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQK-TVLQYMTDGMLVREFLTAP 576
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L YSV+++DEAHER++ TDIL GLLK I R R DL+L+ISSAT++A+ S +F
Sbjct: 577 DLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDG--- 633
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
++ GR + V HY + P +DY+ AAV TVL IH EP GDIL
Sbjct: 634 --------------APTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDIL 679
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VFLTGQ+++D ++L R LII +YS L Q ++F PTP RKVV+
Sbjct: 680 VFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVL 739
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT++GI+YV+D GF KQ+ +NP + +E+LV+ P+S+ASA QR GRAGRV PG
Sbjct: 740 ATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPG 799
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
KC+RL+T F E+ IPE+QR+NL + V+ LK++GI++++ FD+ PP + +I A
Sbjct: 800 KCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAA 859
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI-Q 519
LE LY+LG L+D +LT G ++AE P++P +SKMI++S + CSEEI+TI A+LS+
Sbjct: 860 LEQLYALGALNDRGQLTK-LGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGN 918
Query: 520 SIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
+I+ + D A+ F +GDH+T +N++ + +S + WC +NFI + +M R
Sbjct: 919 TIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKR 977
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/551 (47%), Positives = 369/551 (66%), Gaps = 33/551 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQY--LKEAGWADGGR 96
Y I K R+ LPV+ R L L + + + VGETGSGKTTQIPQ+ E + +
Sbjct: 83 YVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQ 142
Query: 97 VIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREM 156
V ACTQPRR+A +VA RVAEEM VK+GEEVGY+IRFE+ T+ T +K++TDG+LLRE
Sbjct: 143 V-ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK-TILKYMTDGMLLREA 200
Query: 157 MDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFH 216
M+D L++YS I++DEAHER+++TDIL+GLLK++ + R DL++II SAT++A+ +F+
Sbjct: 201 MEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN 260
Query: 217 ARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPP 276
+ +L+V GR + V+++Y E DY+ +A+ TVL IH E
Sbjct: 261 -----------------DAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA 303
Query: 277 GDILVFLTGQDDI-DATIQLLTEEARTSKKNSSG-LIILPLYSGLSRAEQEQVFSPTP-- 332
GDIL+FLTG+D+I DA ++ E + ++ G L + PLY L +Q+++F P P
Sbjct: 304 GDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPES 363
Query: 333 ---RGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
R RKVVISTNIAETSLT++GIVYVVD GFSKQ+ YNP +E+L+V+PISKASA+Q
Sbjct: 364 HNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQ 423
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
RAGRAGR RPGKC+RLYTEE F KE+ + PE+ RSNL S V++LK LGID+++ FD+
Sbjct: 424 RAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 483
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
P PE M+RALE L L LDD+ LT P G ++ PL+PM++ M++ S E CS+EI
Sbjct: 484 DPPAPETMMRALEELNYLACLDDEGNLT-PLGRLASQFPLDPMLAVMLIGSFEFQCSQEI 542
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSH----W 565
+TI A+LS+ ++++ +K D+AK FA +GDH+T LN+Y F + W
Sbjct: 543 LTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKW 602
Query: 566 CHKNFINYHAM 576
C +++NY ++
Sbjct: 603 CRDHYLNYRSL 613
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/538 (47%), Positives = 365/538 (67%), Gaps = 23/538 (4%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVI 98
Y I ++R+ LPV+K + + +++ + I+VGETGSGKTTQIPQ++ +AG G+++
Sbjct: 67 YYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMV 126
Query: 99 ACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMD 158
TQPRR+A +VA RV+EEM ++GEEVGY+IRFE+ ++ T +K+LTDG+LLRE M
Sbjct: 127 GVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSAR-TFMKYLTDGMLLRESMS 185
Query: 159 DPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHAR 218
DP L KY VI++DEAHER++STDIL GL+K I + R DL+LI+ SAT+EA +F
Sbjct: 186 DPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYF--- 242
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGD 278
E P ++ V GR V+I Y EE DY+++AV TV+ IH E GD
Sbjct: 243 ---------ENAP-----LIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGD 288
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
ILVFLTG+++I+ T + E R ++ + LPLYS L +Q ++F +RK
Sbjct: 289 ILVFLTGEEEIEDTCAKIQRETR--ERGLPPMKTLPLYSSLPIYQQSKIFDTC--KERKC 344
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVR 398
++STNIAETSLT++GIV+VVD GFSKQ+ YNP S +E+L+VAPISKASA QRAGRAGR R
Sbjct: 345 IVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTR 404
Query: 399 PGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
PGKC+RLYTE+ F + + + PE+ RSNL S V+QL LG+ +++ FD+ P P+ +I
Sbjct: 405 PGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLI 464
Query: 459 RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
RALEVL+ LG LDD+ +LT G ++E PL+P +SKM++ S E CS EI+TI+A+LS
Sbjct: 465 RALEVLHYLGALDDEGQLTE-IGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSA 523
Query: 519 QSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
+ ++ + + E D AK F +GDH+T LN+Y F ++ + WC+ NF+N+ A+
Sbjct: 524 PNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAI 581
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/536 (44%), Positives = 358/536 (66%), Gaps = 20/536 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
SI++QR+ LPV+ R ++ ++ + IIVGETGSGKTTQ+ QYL E G+ D G +I C
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG-LIGC 491
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RVA+EMGV +G++VGY IRFED T++ T IK++TDG+LLRE + D
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEK-TIIKYMTDGILLRECLGDG 550
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L +YS I++DEAHERS++TD+L GLL+++ R+DL+LI++SAT++A + FF
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGN-- 608
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
P ++ GR F V++ + PV DYV AAV + IH GDIL
Sbjct: 609 ---------CP-----TFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDIL 654
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
+F+ GQ+DI+ T +++ E+ + L +LP+YS L Q ++F P G RK ++
Sbjct: 655 IFMPGQEDIECTCEMIKEKL-GELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIV 713
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT++GI++V+D GF K + YNP ++ L + P+S+ASA QR GRAGR PG
Sbjct: 714 ATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPG 773
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
+CYRLYTE F E+ +PE+QR+NL + V+ LK+LG+D++L F + +PP + M+ +
Sbjct: 774 QCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNS 833
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
+ L++LG LD+ +LT P G ++ E PL+P +SKM++ S E+GCS+E++TI ++LS+ +
Sbjct: 834 MYQLWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPA 892
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAM 576
I+ +G ++E D K +F E DH+TFLN+Y + S+ WC N+++ A+
Sbjct: 893 IFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKAL 948
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/547 (44%), Positives = 364/547 (66%), Gaps = 21/547 (3%)
Query: 30 SSASSIGYGYASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA 89
S ASS SI +QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E
Sbjct: 513 SEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHED 572
Query: 90 GWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTD 149
G+ D G +I CTQPRR+A +VA RV+EEMG +GEEVGY IRFED T+++ T IK++TD
Sbjct: 573 GYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TLIKYMTD 630
Query: 150 GVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAK 209
G+LLRE + + L YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+
Sbjct: 631 GILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAE 690
Query: 210 SMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLL 269
+AFF VP I + GR F V I + + P DYV+AAV L
Sbjct: 691 KFAAFFGN------------VP-----IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQ 733
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
+H PGDIL+F+ GQ+DI+ T + E +N+ L +LP+YS L Q ++F
Sbjct: 734 VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQ 792
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
P G RK +++TNIAETSLT++GI++V+DSG+ K + +NP ++ L + PIS+A+A Q
Sbjct: 793 KAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQ 852
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
R+GRAGR PG+C+RLYT+ + E+ +PE+QR+NL + V+ LK+LG+ ++L F +
Sbjct: 853 RSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFM 912
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP + M+ ++ L+ LG LD+ LTS TG + E PL+P +SKM++ S ++GCS EI
Sbjct: 913 DPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEI 971
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
+ I ++LS+ +I+ +G ++E D+ + +FA E DH+T+LN+Y + + S+ WC+ +
Sbjct: 972 LLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDH 1031
Query: 570 FINYHAM 576
FI+ AM
Sbjct: 1032 FIHAKAM 1038
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/547 (43%), Positives = 363/547 (66%), Gaps = 21/547 (3%)
Query: 30 SSASSIGYGYASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEA 89
S ASS SI +QRQ LP++ + +L ++ ++ I+VGETGSGKTTQ+ QYL E
Sbjct: 513 SEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHED 572
Query: 90 GWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTD 149
G+ D G +I CTQPRR+A +VA RV+EEMG +GEEVGY IRFED T++ T IK++TD
Sbjct: 573 GYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSES-TLIKYMTD 630
Query: 150 GVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAK 209
G+LLRE + + L YS I++DEAHERS++TD+L GLL+++ RSDL+LI++SAT++A+
Sbjct: 631 GILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAE 690
Query: 210 SMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLL 269
++FF VP I + GR F V I + + P DYV+AAV L
Sbjct: 691 KFASFFGN------------VP-----IFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQ 733
Query: 270 IHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFS 329
+H PGDIL+F+ GQ+DI+ T + E +N+ L +LP+YS L Q ++F
Sbjct: 734 VHLSGAPGDILIFMPGQEDIEVTSDQIVEHLE-ELENAPALAVLPIYSQLPSDLQAKIFQ 792
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
P G RK +++TNIAETSLT++GI++V+DSG+ K + +NP ++ L + PIS+A+A Q
Sbjct: 793 KAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQ 852
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWP 449
R+GRAGR PG+C+RLYT+ + E+ +PE+QR+NL + V+ LK+LG+ ++L F +
Sbjct: 853 RSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFM 912
Query: 450 ASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEI 509
PP + M+ ++ L+ LG LD+ LTS TG + E PL+P +SKM++ S ++GCS EI
Sbjct: 913 DPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDMGCSSEI 971
Query: 510 ITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
+ I ++LS+ +I+ +G ++E D+ + +FA E DH+++LN+Y + + S+ WC+ +
Sbjct: 972 LLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDH 1031
Query: 570 FINYHAM 576
FI+ AM
Sbjct: 1032 FIHAKAM 1038
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/538 (44%), Positives = 356/538 (66%), Gaps = 21/538 (3%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
S +QR+ LP + R +L ++ + I+VGETGSGKTTQ+ Q+L E G+ G +I C
Sbjct: 484 SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG-MIGC 542
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RV+EEMGV++G VGY+IRFED T D T IK++TDGVLLRE +
Sbjct: 543 TQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TVIKYMTDGVLLRESLMQN 601
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L KYSVI++DEAHERS++TDIL+GLLKK+ R D++L+++SAT+ ++ S FF
Sbjct: 602 NLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGG--- 658
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDIL 280
P+ ++ GR + V I + + P SDYV+AAV VL IH +P GDIL
Sbjct: 659 ---------APQF-----TIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDIL 704
Query: 281 VFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVI 340
VF+TGQ+DI+AT +++ + ++ L ILP+YS + Q ++F G RKVV+
Sbjct: 705 VFMTGQEDIEATCEIIADRL-NQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVV 763
Query: 341 STNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPG 400
+TNIAETSLT+ GI YVVD+G+ K + YN I+ L V PIS+A+A QRAGRAGR PG
Sbjct: 764 ATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPG 823
Query: 401 KCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRA 460
YRLYTE +++E+ +PE+QR+NL + V+ LK+LG++ I FD+ PP + ++ +
Sbjct: 824 IAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMAS 883
Query: 461 LEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQS 520
L L++LG LD+ KLT+ G +++ P++P +SK+I+ + + C+EEIITI ++LS+ S
Sbjct: 884 LYELWTLGALDNFGKLTT-LGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPS 942
Query: 521 IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINYHAMVR 578
++ + +E D A+ +F E DH+ LNIY+ + ++ S+ WC K+F++ + R
Sbjct: 943 VFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKR 1000
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/558 (42%), Positives = 358/558 (64%), Gaps = 23/558 (4%)
Query: 24 FLSSSLSSASSIGYGYASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIP 83
F+S SLS+ ++ + Q++ LP+ KYR +LY VE + TI++G TG GKTTQIP
Sbjct: 5 FISQSLSTLTN-----TPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIP 59
Query: 84 QYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTA 143
Q+L EAGWA +I CTQPRRL ++V+ RV+ E+ G GY+I+F D + T
Sbjct: 60 QFLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQF-DHNVSEKTK 118
Query: 144 IKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISS 203
IK++TDG+LL E+ DPLL +YS++++DE HER++STD+LLG+LK+I R+D RL++SS
Sbjct: 119 IKYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSS 178
Query: 204 ATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAA 263
A+++A +S FF K +S+EG+ F V+ ++++P +YV +A
Sbjct: 179 ASVDANKLSQFFGQDK---------------VCTMSIEGKLFPVETLFLQKPTENYVDSA 223
Query: 264 VSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAE 323
+ TV+ I+ PPGDILVFL+G+ +I+ I+ + + + ++ L+ LPL++GL+ E
Sbjct: 224 IETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDE 283
Query: 324 QEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPIS 383
Q +VF+ RKV+ STNIAETS+T++GIVYVVDSGF+KQR YNP + L+ PIS
Sbjct: 284 QMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPIS 343
Query: 384 KASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNI 443
K+SA QR+GRAGR GK +RLYTE+ + + E ++ ++ V+ LK LG+ NI
Sbjct: 344 KSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNI 402
Query: 444 LGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNEL 503
L F + PP ++ ALE LY LGVLD+ LT P G Q++ L+ ISK +L+SN+
Sbjct: 403 LQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQF 462
Query: 504 GCSEEIITISAVLSIQSIWVSGRGAQK-ELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKS 562
GC+ EI++I+++L+ ++ + + K + A F A EGD +T LN+++ F+ + K
Sbjct: 463 GCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKD 522
Query: 563 SHWCHKNFINYHAMVRNL 580
WC KN++NY + + L
Sbjct: 523 LQWCRKNYLNYQTLRQAL 540
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/537 (43%), Positives = 350/537 (65%), Gaps = 23/537 (4%)
Query: 42 IEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACT 101
I +QR+ LP+++ + ++ + ++VGETGSGK+TQIPQ+L E +A G +A T
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEG-CVAIT 147
Query: 102 QPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPL 161
QPRR+A +A RVA E G ++GE+VGY+IRF+D T+K T IK+LTDG+LLRE+++DP+
Sbjct: 148 QPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKK-TRIKYLTDGMLLRELINDPI 206
Query: 162 LTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
L++Y +++DEAHER++ TD+LLG +KKI + R LR+II SAT+ A+ S FF
Sbjct: 207 LSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFF------ 260
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
+G E I + GR + VQIHY P DY+ A + T+ +H K PPGDILV
Sbjct: 261 ---DGAE--------ICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILV 309
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIS 341
FLTGQD+I+A L+ ++ N + PL++ L + +Q QVF P RKVV+S
Sbjct: 310 FLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLS 369
Query: 342 TNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGK 401
TNIAETS+T+ GI YV+D+G +K + +N +E+L V PIS+++A QR+GRAGR G+
Sbjct: 370 TNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQ 429
Query: 402 CYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRAL 461
CYR+YTE F K +P E IPE++R +L V+ LKA G ++++ F + P E ++RAL
Sbjct: 430 CYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRAL 488
Query: 462 EVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSI 521
E LYS+G LDD+ + G+Q++ IPL P +++ +L++ E C E+I + + LS S+
Sbjct: 489 EHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSM 547
Query: 522 WVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS--HWCHKNFINYHAM 576
++ + + E EA+L+F +EGD +T LN + +L+S S WC +NFIN A+
Sbjct: 548 FLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRAL 604
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 362/550 (65%), Gaps = 31/550 (5%)
Query: 42 IEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA-DGGRVIAC 100
I+ +++LPV++ R+ +L L+ + +I+GETGSGKTTQ+ QYL E G+A D G+ I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A +VA RVA EM V +G+EVGY+IRFED T+ + T +KF+TDG+LLRE + D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKG 220
L KYS +++DEAHERS++TDILLG K + R DL+LII+SAT+ AK SAFF
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGN--- 519
Query: 221 RRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIH--DKEPPGD 278
P+ ++ GR F VQ Y PV DYV+AAVS + IH + GD
Sbjct: 520 ---------APQ-----FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGD 565
Query: 279 ILVFLTGQDDIDATIQLLTEEART--SKKNSSG-------LIILPLYSGLSRAEQEQVFS 329
IL+F+TGQ+DI+ T L E+ SKK + + ILP+YS L Q ++F
Sbjct: 566 ILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQ 625
Query: 330 PTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQ 389
KRK++I+TNIAETSLT++GI YV+D G+SK + YNP +++LV+ PISKA+A Q
Sbjct: 626 DLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQ 685
Query: 390 RAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGI-DNILGFDW 448
R+GRAGR PG YRLYTE+ F +++ + IPE+QR+NL + ++ LK+L + D + F +
Sbjct: 686 RSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPF 745
Query: 449 PASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEE 508
PP + + +L L+ +G +D +LT P G Q+A+ PL+P +SK++L + GCS+E
Sbjct: 746 IDKPPLQTFLSSLYELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILLIAVRNGCSDE 804
Query: 509 IITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHK 568
++TI ++LS+ ++ + QKE D A+ +F A+ DH+T LN+++ + + SSHWC+K
Sbjct: 805 MLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNK 864
Query: 569 NFINYHAMVR 578
+F+ Y ++VR
Sbjct: 865 HFVQYKSLVR 874
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/546 (43%), Positives = 347/546 (63%), Gaps = 30/546 (5%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
++E QR+ LP+++ R +L + +++GETGSGKTTQIPQYL E G + G +IA
Sbjct: 57 ALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAV 115
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A ++A+RV++E ++G+ VGYT+RFED T++D T IKFLTDG+LLRE + D
Sbjct: 116 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSED-TRIKFLTDGMLLREAISDS 174
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFF 215
LL KYS +++DEAHER+I TD+L G++K Q+ R +L ++I+ SAT++ S +F
Sbjct: 175 LLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYF 234
Query: 216 HARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
+ +L +EGR +QI Y ++P DY+ AA+ +V IH + P
Sbjct: 235 N-----------------RAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAP 277
Query: 276 PG-DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
DILVFLTGQ++I+A + + AR +++LPLY+ L ++Q +VF P+G
Sbjct: 278 ASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKG 337
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRA 394
RKV+ISTNIAETS+T+ GI YVVD+G K + YNP S +E L V +SK A QR GRA
Sbjct: 338 YRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRA 397
Query: 395 GRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
GR G CYRLYTE+ F K +PE+QR NL S ++QL A+ + N+L FD+ + P P
Sbjct: 398 GREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSP 456
Query: 455 ---EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
EA I L++L +L DD LT P G ++A PLEP +K IL S++ C+EEI+T
Sbjct: 457 DHIEAAIAQLDLLGALEHKDDQLTLT-PIGRKMAAFPLEPRFAKTILLSSKFHCTEEILT 515
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
I ++LS+ S+ + + E+ + +F ++EGDH+T LNIY+ F + WC +NF+
Sbjct: 516 IVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFV 575
Query: 572 NYHAMV 577
N M+
Sbjct: 576 NSKNML 581
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/544 (42%), Positives = 346/544 (63%), Gaps = 28/544 (5%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIAC 100
++E QR+ LP+++ R +L + +++GETGSGKTTQIPQYL E G + G +IA
Sbjct: 66 AVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAV 124
Query: 101 TQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDP 160
TQPRR+A ++A+RV++E ++G+ VGYT+RF+D T++D T IKFLTDG+LLRE + D
Sbjct: 125 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TRIKFLTDGMLLREAISDS 183
Query: 161 LLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDL-----RLIISSATIEAKSMSAFF 215
LL KYS +++DEAHER+I TD+L G++K Q+ R +L ++I+ SAT++ S +F
Sbjct: 184 LLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYF 243
Query: 216 HARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP 275
+ +L +EGR +Q+ Y ++P +DY+ AA+ +V IH + P
Sbjct: 244 NG-----------------APVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAP 286
Query: 276 PG-DILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRG 334
DILVFLTGQ++I+A + + A+ +++LPLY+ L A+Q +VF P+G
Sbjct: 287 SSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKG 346
Query: 335 KRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRA 394
RKV+ISTNIAETS+T+ GI YVVD+G K + YNP S +E L V +SK A QR GRA
Sbjct: 347 YRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRA 406
Query: 395 GRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
GR G CYRLYTE+ F K +PE+QR NL S ++QL A+ + N+L FD+ + P P
Sbjct: 407 GREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSP 465
Query: 455 EAMIRALEVLYSLGVLD--DDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITI 512
+ + A+ L LG L+ DD +P G ++A PLEP +K IL S + C+EEI+TI
Sbjct: 466 DHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTI 525
Query: 513 SAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFIN 572
++LS+ S+ + ++E+ + +F ++EGDH+T LNIY+ F + WC +NF+N
Sbjct: 526 VSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVN 585
Query: 573 YHAM 576
M
Sbjct: 586 SKNM 589
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 339/545 (62%), Gaps = 30/545 (5%)
Query: 41 SIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRV-IA 99
+I++ R+ LPV++Y+ +L ++ + II+GETGSGKTTQ+PQYL E G+ D G++ IA
Sbjct: 215 TIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIA 274
Query: 100 CTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
TQPRR+A +VA+RVA+EM V +G+EVGY IRFED T + T +K++TDG+LLRE + D
Sbjct: 275 ITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTD 334
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
L+KYS IM+DEAHER+++TDIL+GLLK I R L+L+ISSAT+ AK S FF
Sbjct: 335 SKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFD--- 391
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEP-PGD 278
I +V GR + V IHY +P ++Y+ AA++T+ IH + PGD
Sbjct: 392 --------------NCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGD 437
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
ILVFLTGQ++I+ T L E + +II P+Y+ L + +Q ++F PTP RKV
Sbjct: 438 ILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKV 497
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVR 398
V++TNIAETSLT++GI YV+D GF K+ Y P + + L+ P S+AS QRAGRAGRV
Sbjct: 498 VLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVG 557
Query: 399 PGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
PGKC+R++T+ ++ E+ PE+ R+NL + V+ L +LG+ +++ F P +
Sbjct: 558 PGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLR 617
Query: 459 RALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNE----LGCSEEIITISA 514
++LE LY LG L+ +T G + E P EP +K++ ++ G EE +TI +
Sbjct: 618 KSLENLYILGALNSKGTITR-LGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVS 676
Query: 515 VL-SIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSSHWCHKNFINY 573
+L S+++ ++ D A + E DH+ +L I+ + S S WC + I +
Sbjct: 677 MLHETPSLFIG-----QKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQF 731
Query: 574 HAMVR 578
M+R
Sbjct: 732 KTMLR 736
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/440 (46%), Positives = 296/440 (67%), Gaps = 25/440 (5%)
Query: 144 IKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISS 203
IK++TDG+LLRE M DPLL +Y VI++DEAHER+++TDIL+GLLK++++ RSDL+L++ S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 204 ATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAA 263
AT++A +F +++V GR V+I Y EP DY++AA
Sbjct: 61 ATLDAGKFQHYFD-----------------NAPLMTVPGRTHPVEIFYTPEPERDYLEAA 103
Query: 264 VSTVLLIH-DKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRA 322
+ TV+ IH +E GD+L+FLTGQ++I+ + + E L +PLYS L A
Sbjct: 104 IRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPA 163
Query: 323 EQEQVFSPTPRGK------RKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIEN 376
Q+++F P K RKVV+STNIAETSLT++G+V+V+D GF+KQ+ YNP +E+
Sbjct: 164 MQQRIFEHAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 223
Query: 377 LVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLK 436
L+V+PISKASA+QR GRAGR RPGKC+RLYTE+ + E+ PE+ RSNL + V+QLK
Sbjct: 224 LLVSPISKASAQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLK 283
Query: 437 ALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKM 496
LGID+++ FD+ P PE ++RALE+L LG LDD LT G +AE PL+P ++KM
Sbjct: 284 KLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTR-LGSMMAEFPLDPQLAKM 342
Query: 497 ILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGF 556
+++S + CS EI++++A+LS+ ++ A+K DEAK+RFA +GDH+T LN+Y F
Sbjct: 343 VIASTDYSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAF 402
Query: 557 LQSCKSSHWCHKNFINYHAM 576
Q+ + WC+ NFI Y ++
Sbjct: 403 KQNNEDPQWCYDNFIQYRSL 422
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 334/539 (61%), Gaps = 36/539 (6%)
Query: 44 KQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGR-VIACTQ 102
K R+ LPVY+++ I+ +E++ T+++GETGSGK+TQIPQ++ E + IA TQ
Sbjct: 76 KMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQ 135
Query: 103 PRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLL 162
PRR+A +A+RVA+E G K+GE+VGY++RF D T T +K+LTDG+LLRE+M + L
Sbjct: 136 PRRVAAINLATRVAQEHGCKLGEQVGYSVRF-DNTTTTRTRLKYLTDGMLLRELMMNSDL 194
Query: 163 TKYSVIMVDEAHERSISTDILLGLLKK-IQRCRSDLRLIISSATIEAKSMSAFFHARKGR 221
+YSVI++DEAHER++ TD++LG LK IQ R DLR+I+ SAT++A+ S FF+
Sbjct: 195 REYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFN----- 249
Query: 222 RGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILV 281
IL VEGR F+V+ +Y++ P D V A + + I+ E GDIL
Sbjct: 250 ------------NAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILC 297
Query: 282 FLTGQDDIDATIQLLTEEAR-TSKKNSSGLII-LPLYSGLSRAEQEQVFSPTPRGKRKVV 339
FL GQ++ID + ++ + A+ S + LI+ PLY+ L +Q VF+P KRKVV
Sbjct: 298 FLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVV 357
Query: 340 ISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRP 399
STNIAETS+T+ G+ +VVDSG K + + + L+ PIS+ASA QR+GRAGR
Sbjct: 358 FSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESE 417
Query: 400 GKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIR 459
GK +RLY E +VK +P + PE+ RS++ S V+ LK G+D++L + W +P EA++
Sbjct: 418 GKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVM 476
Query: 460 ALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQ 519
L+ LY LG LD K+T G Q+A +PL+P +S +++ ++E+GC ++I I + LS++
Sbjct: 477 GLQELYELGALDTRGKITK-RGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVE 535
Query: 520 SIWVSGRGAQK-ELDEAKLRFAAA---EGD--------HVTFLNIYKGFLQSCKSSHWC 566
++ ++ ++ E++E +L A GD + F + K S + + WC
Sbjct: 536 NLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWC 594
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/552 (38%), Positives = 329/552 (59%), Gaps = 45/552 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
P+ K R I+ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAA 111
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA RVAEEM +G +VGY +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRS-----DLRLIISSATIEAKSMSAFFHARKGRRG 223
++DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG------- 223
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYV------EEPVSDYVQAAVSTVLLIHDKEPPG 277
I + GR + V+ + + + Y+QA V + IH E G
Sbjct: 224 ----------NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG 273
Query: 278 DILVFLTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSP 330
DILVFLTGQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P
Sbjct: 274 DILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLP 333
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQR 390
P G RK VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+ A QR
Sbjct: 334 PPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 391 AGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
+GRAGR GKC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F +
Sbjct: 394 SGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P ++ AL+ LY +D +T G + E PL P ++ ++ + L C + ++
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLL 512
Query: 511 TISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----H 564
I+A+LS++++++ QKE ++ AA G F + F Q CKSS
Sbjct: 513 PIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPAS 571
Query: 565 WCHKNFINYHAM 576
WC K++I++ +
Sbjct: 572 WCQKHWIHWRCL 583
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/552 (38%), Positives = 329/552 (59%), Gaps = 45/552 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
P+ K R I+ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAA 111
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA RVAEEM +G +VGY +RF+D ++K+ TAIK++TDG LL+ ++ DP LTK+SVI
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRS-----DLRLIISSATIEAKSMSAFFHARKGRRG 223
++DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFG------- 223
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYV------EEPVSDYVQAAVSTVLLIHDKEPPG 277
I + GR + V+ + + + Y+QA V + IH E G
Sbjct: 224 ----------NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG 273
Query: 278 DILVFLTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSP 330
DILVFLTGQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P
Sbjct: 274 DILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLP 333
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQR 390
P G RK VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+ A QR
Sbjct: 334 PPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 391 AGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
+GRAGR GKC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F +
Sbjct: 394 SGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P ++ AL+ LY +D +T G + E PL P ++ ++ + L C + ++
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAASLDCEDLLL 512
Query: 511 TISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----H 564
I+A+LS++++++ QKE ++ AA G F + F Q CKSS
Sbjct: 513 PIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPAS 571
Query: 565 WCHKNFINYHAM 576
WC K++I++ +
Sbjct: 572 WCQKHWIHWRCL 583
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/552 (38%), Positives = 329/552 (59%), Gaps = 45/552 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAA 111
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA RVAEEM +G +VGY +RF+D ++K+ TAIK++TDG LL+ ++ DP L+K+SVI
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLSKFSVI 170
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRS-----DLRLIISSATIEAKSMSAFFHARKGRRG 223
++DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG------- 223
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYV------EEPVSDYVQAAVSTVLLIHDKEPPG 277
I + GR + V+ + + + Y+QA V + IH E G
Sbjct: 224 ----------NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG 273
Query: 278 DILVFLTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSP 330
DILVFLTGQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P
Sbjct: 274 DILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLP 333
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQR 390
P G RK VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+ A QR
Sbjct: 334 PPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 391 AGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
+GRAGR GKC+R+Y++E++ + +P IPE++R++L S V+ LK L I +++ F +
Sbjct: 394 SGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P ++ AL+ LY +D +T G + E PL P ++ ++ + L C + ++
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRAASLDCEDLLL 512
Query: 511 TISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----H 564
I+A+LS++++++ QKE ++ AA G F + F Q CKSS
Sbjct: 513 PIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPAS 571
Query: 565 WCHKNFINYHAM 576
WC K++I++ +
Sbjct: 572 WCQKHWIHWRCL 583
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 328/552 (59%), Gaps = 45/552 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
P+ K R ++ V ++ I+ G TGSGKTTQ+P+YL EAG++ G +I TQPR++A
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVAA 111
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+VA RVAEEM +G +VGY +RF+D ++K+ TAIK++TDG LL+ ++ DP L K+SVI
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKE-TAIKYMTDGCLLKHILGDPNLNKFSVI 170
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRS-----DLRLIISSATIEAKSMSAFFHARKGRRG 223
++DEAHER+++TDIL GLLKK+ + +S L++++ SAT+E +SAFF
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG------- 223
Query: 224 LEGVELVPRLEPAILSVEGRGFNVQIHYV------EEPVSDYVQAAVSTVLLIHDKEPPG 277
I + GR + V+ + + + Y+QA V + IH E G
Sbjct: 224 ----------NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAG 273
Query: 278 DILVFLTGQDDIDATIQLLTEEART-------SKKNSSGLIILPLYSGLSRAEQEQVFSP 330
DILVFLTGQ +I+ + +LL + A + GL+ILP Y ++ +Q ++F P
Sbjct: 274 DILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLP 333
Query: 331 TPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQR 390
P G RK VISTNI+ TSLT++GI YVVD GF KQ +NP ++ L V PISK+ A QR
Sbjct: 334 PPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQR 393
Query: 391 AGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPA 450
+GRAGR GKC+R+Y+++++ + +P IPE++R++L S V+ LK L I +++ F +
Sbjct: 394 SGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 451 SPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEII 510
P ++ AL+ LY +D +T G + E PL P ++ ++ + L C + ++
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRAASLDCEDLLL 512
Query: 511 TISAVLSIQSIWVSGRGA--QKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS----H 564
I+A+LS++++++ QKE ++ AA G F + F Q CKSS
Sbjct: 513 PIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQ-CKSSGAPAS 571
Query: 565 WCHKNFINYHAM 576
WC K++I++ +
Sbjct: 572 WCQKHWIHWRCL 583
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 316/541 (58%), Gaps = 45/541 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LPV + + I L+ H ++ GETGSGKTTQ+P+ E G+ + G +I TQPRR+A
Sbjct: 83 LPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLG-MIGHTQPRRIAA 141
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
++VA+R+AEE+ ++G VGY +RF D + D T IK +TDG+LL E+ +D L +YS +
Sbjct: 142 RSVAARIAEELETELGGLVGYKVRFNDQIS-DNTQIKLMTDGILLAEIQNDRFLNQYSCL 200
Query: 169 MVDEAHERSISTDILLGLLKKI-QRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGV 227
++DEAHERS++ D +LG LK++ R R DL+LII+SATI+ + S F+
Sbjct: 201 IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFN----------- 249
Query: 228 ELVPRLEPAILSVEGRGFNVQIHY---VEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLT 284
I+ V GR + V++ Y VEE D +Q ++ V + E GDIL+F+
Sbjct: 250 ------NAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQ-AEGRGDILIFMN 302
Query: 285 GQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNI 344
G+ +I T + L K+N ILPL++ LS EQ ++F P+ G ++V++TN+
Sbjct: 303 GEREIRDTAEAL------QKQNLKHTEILPLFARLSAQEQNKIFHPS--GLNRIVLATNV 354
Query: 345 AETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYR 404
AETSLT+ I YV+D G ++ Y+ + ++ L + PIS+ASA QR GR GRV G C R
Sbjct: 355 AETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 414
Query: 405 LYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVL 464
LY+EE F P PE+ R+NL S ++Q+ ALG+D+I F + +P + +++L
Sbjct: 415 LYSEEDFNSR-PEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLL 473
Query: 465 YSLGVLDD------DAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
LG + + +L + G Q+A++P++P ++KMILS+ GC E++ I + LSI
Sbjct: 474 EELGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSI 533
Query: 519 QSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQSCKSS------HWCHKNFIN 572
Q + Q+ DE RFA + D + FLN+++ + K S C K+F+N
Sbjct: 534 QDPRERPQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLN 593
Query: 573 Y 573
Y
Sbjct: 594 Y 594
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 299/544 (54%), Gaps = 74/544 (13%)
Query: 42 IEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWA----DGGRV 97
I++ R LP+ I+ + + II G TGSGKTTQ+PQ+L EAG++ + +
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 98 IACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMM 157
IA TQPRR+A ++A RV+EE+ +V Y IRF+ N D TAIKF+TDG+LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPD-TAIKFMTDGILLRELS 508
Query: 158 DDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSD----------LRLIISSATIE 207
D LLT YS ++VDEAHERS++TDILLGLL +I R R + L+LII SAT+
Sbjct: 509 SDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLR 568
Query: 208 AKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTV 267
S +L+ + P I+ ++ R + V IH+ DY+Q A V
Sbjct: 569 VTDFSE-------------NKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKV 615
Query: 268 LLIHDKEPPGDILVFLTGQDDIDATIQLLTE-----------EAR--------------- 301
LIH + P G ILVFLTGQ +++ Q+L + AR
Sbjct: 616 CLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDL 675
Query: 302 ------------------TSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTN 343
T S + +LPLYS L+ +Q +VF +P G R +++TN
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATN 735
Query: 344 IAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCY 403
+AETS+T+ I YVVD G +K+R YN + ++ V ISKA+A QRAGRAGR PG CY
Sbjct: 736 VAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCY 795
Query: 404 RLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEV 463
RLY+ F P +PE+ R+ + S V+Q+K + IDNI F +P SP + ++L++
Sbjct: 796 RLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKL 855
Query: 464 LYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWV 523
L +LG +D + LT G Q++ PL P SKM++ + GC +I + + LSI ++V
Sbjct: 856 LSNLGAIDSEGVLTK-LGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFV 914
Query: 524 SGRG 527
S +
Sbjct: 915 SKQS 918
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 309/553 (55%), Gaps = 44/553 (7%)
Query: 40 ASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIA 99
A ++++R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +A
Sbjct: 153 AKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VA 208
Query: 100 CTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
CTQPRR+A ++A RV E + G +VGY IRFE T T I FLT G+LLR++ +
Sbjct: 209 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQIQRE 267
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARK 219
P L +Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F
Sbjct: 268 PSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFS--- 324
Query: 220 GRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVE---EPVSDYVQAAVSTVLL-----IH 271
++ V GR F + + Y EP + + L I
Sbjct: 325 --------------NAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESID 370
Query: 272 DKEPP---GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVF 328
K PP GD+LVFL+G +I A + E A+T ++ ++LPL+S LS A+Q++VF
Sbjct: 371 HKYPPEERGDLLVFLSGMAEISAVL----EAAQTYASHTQRWVVLPLHSALSVADQDKVF 426
Query: 329 SPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASAR 388
P G RK ++STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+ASA
Sbjct: 427 DVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAE 486
Query: 389 QRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDW 448
QR GRAGR PG C+RLY E + P +PE++R L S V+Q+K++ + + F +
Sbjct: 487 QRKGRAGRTGPGVCFRLYAESDYDAFAPYP-VPEIRRVALDSLVLQMKSMSVGDPRTFPF 545
Query: 449 PASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEE 508
PPP ++ A+ L G LD LT P G +A++P++ +I KM++ + E
Sbjct: 546 IEPPPPASLETAILYLRDQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFSLVEP 604
Query: 509 IITISAVLSIQSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGFLQ-----SCKSS 563
++TI+A LS+QS + + E A+ + +GD T N++ ++Q S S
Sbjct: 605 VLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSR 664
Query: 564 HWCHKNFINYHAM 576
WC + I H +
Sbjct: 665 KWCRRRGIEEHRL 677
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 308/541 (56%), Gaps = 45/541 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LPV + + IL + H I+ GETGSGKTTQ+P+ E G G +I TQPRRLA
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135
Query: 109 QAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVI 168
+ VA+R+AEE+ + G +GY +RF D + D T +K +TDG+LL E+ D LL +Y I
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 169 MVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVE 228
++DEAHERS++ D LLG LK++ R DL++II+SATI+ + S F+
Sbjct: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN------------ 242
Query: 229 LVPRLEPAILSVEGRGFNVQIHY---VEEPVS---DYVQAAVSTVLLIHDKEPPGDILVF 282
I+ V GR + V++ Y VEE D +QA V + +E GDIL+F
Sbjct: 243 -----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIF 296
Query: 283 LTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIST 342
++G+ +I T L +K N ILPLY+ LS +EQ +VF R++V++T
Sbjct: 297 MSGEREIRDTADAL------NKLNLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLAT 348
Query: 343 NIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKC 402
N+AETSLT+ GI YV+D G ++ Y+ + ++ L + PIS+ASA QR GR GRV G C
Sbjct: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408
Query: 403 YRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALE 462
RLY+E+ F+ P PE+ R+NL S ++Q+ ALG+ +I F + +P + +
Sbjct: 409 IRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467
Query: 463 VLYSLGVLDDDAKLT----SPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSI 518
+L LG + D + + +P G Q++++P++P +++M+L + + GC E + I++ LSI
Sbjct: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527
Query: 519 QSIWVSGRGAQKELDEAKLRFAAAEGDHVTFLNI--YKGFLQSCKSSH----WCHKNFIN 572
Q Q+ DE RF E D + F+N+ Y G Q SS+ C +++N
Sbjct: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587
Query: 573 Y 573
Y
Sbjct: 588 Y 588
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 328 bits (841), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 312/556 (56%), Gaps = 50/556 (8%)
Query: 40 ASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIA 99
A ++++R LP+ +Y IL ++ H ++ G+TG GK+TQ+PQYL AG++ +A
Sbjct: 155 AKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VA 210
Query: 100 CTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDD 159
CTQPRR+A ++A RV E + G +VGY IRFE T T I FLT G+LLR++ +
Sbjct: 211 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLLLRQIQRE 269
Query: 160 PLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFF-HAR 218
P L +Y V++VDE HER + D LLG+L+++ R DL++I+ SATI S++F HA
Sbjct: 270 PSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHA- 328
Query: 219 KGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAA--------VSTVLLI 270
++ V GR F + + Y + + + + I
Sbjct: 329 -----------------PVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAI 371
Query: 271 HDKEPP---GDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQV 327
+K PP GD+LVFL+G +I + A +++ ++LPL+S LS ++Q++V
Sbjct: 372 DNKYPPEERGDLLVFLSGMAEITTVLDAAQAYASLTQR----WVVLPLHSALSVSDQDKV 427
Query: 328 FSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASA 387
F P G RK ++STNIAETS+T++GI +VVDSG K+ Y+P + ++ L IS+ASA
Sbjct: 428 FDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASA 487
Query: 388 RQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFD 447
QR GRAGR PG CYRLY E + P +PE++R L + V+Q+K++ + + F
Sbjct: 488 EQRKGRAGRTGPGVCYRLYAESDYDAFAPYP-VPEIRRVALDALVLQMKSMSVGDPRTFP 546
Query: 448 WPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSE 507
+ PPP ++ A+ L G LD LT P G +A++P++ +I KM++ + +E
Sbjct: 547 FIEPPPPASVETAILYLQEQGALDSSEALT-PIGSLLAQLPVDVVIGKMLILGSMFSLAE 605
Query: 508 EIITISAVLSIQSIWVSGRGAQKELDEAKLR--FAAAEGDHVTFLNIYKGFLQ-----SC 560
++TI+A LS+QS + R AQ LD A R + +GD T N++ ++Q S
Sbjct: 606 PVLTIAAALSVQSPFT--RSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSG 663
Query: 561 KSSHWCHKNFINYHAM 576
S WC + + H +
Sbjct: 664 NSRKWCRRRGVEEHRL 679
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 296/547 (54%), Gaps = 47/547 (8%)
Query: 49 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 108
LP+Y YR IL + +++GETGSGK+TQ+ Q+L ++G A I CTQPR++A
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVA-ASESIVCTQPRKIAA 361
Query: 109 QAVASRVAEEM-GVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSV 167
+ RV EE G V T F T + + + ++TD LL+ M D L+ S
Sbjct: 362 MTLTDRVREESSGCYEENTVSCTPTFSS-TEEISSKVVYMTDNCLLQHYMKDRSLSGISC 420
Query: 168 IMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGV 227
+++DEAHERS++TD+LL LL+K+ R DLRL+I SAT +A +S +
Sbjct: 421 VIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYL------------ 468
Query: 228 ELVPRLEPAILSVEGRGFNVQIHY----VEEP-----VSDYVQAAVSTVLLIHDKEPPGD 278
+ IL V GR F V+I Y EE ++ Y V + IH E G
Sbjct: 469 -----FDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGT 523
Query: 279 ILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKV 338
IL FLT Q +++ + + I LPL+ LS EQ VF P G+RKV
Sbjct: 524 ILAFLTSQAEVEWACERFV---------APSAIALPLHGKLSFEEQFMVFQNYP-GRRKV 573
Query: 339 VISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVR 398
+ +TNIAETSLT+ G+ YV+DSG K+ Y P + + L V +S++SARQRAGRAGR
Sbjct: 574 IFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTE 633
Query: 399 PGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMI 458
PG+CYRLY++ F + PE++R +L ++++ ALGIDNI F++ +P PEA+
Sbjct: 634 PGRCYRLYSKTDF-DSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIA 692
Query: 459 RALEVLYSLG-VLDDDAKLT-SPTGFQVAEIPLEPMISKMILSSNELGCSEEIITISAVL 516
A++ L LG V++ + L + G + ++ LEP + K+IL +E I ++AV+
Sbjct: 693 MAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVM 752
Query: 517 SIQS---IWVSGRGAQKELDEAKLRFAAAEGDHVTFLNIYKGF--LQSCKSSHWCHKNFI 571
+ S V + + D K++F GD T L++YK + L + + WC +N +
Sbjct: 753 ANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSL 812
Query: 572 NYHAMVR 578
N +M R
Sbjct: 813 NAKSMRR 819
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 194/613 (31%), Positives = 306/613 (49%), Gaps = 82/613 (13%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADG 94
Y ++ R++LP Y + ++ L++ H T+I GETG GKTTQ+ Q++ E G
Sbjct: 197 YIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSA 256
Query: 95 GRVIACTQPRRLAVQAVASRVAEEMGVKVG--EEVGYTIRFEDFTNKDLTAIKFLTDGVL 152
R++ CTQPRR++ +VA RVA E G GY IR + + +I + T G++
Sbjct: 257 CRIV-CTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 315
Query: 153 LREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMS 212
L+ + DP L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S
Sbjct: 316 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 375
Query: 213 AFFHARKG---------------RRGLEGVELVPRLEPAILSVEGRGFNVQIH------- 250
+F +E + VP + S RGF +Q H
Sbjct: 376 EYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPE-QKEHRSQFKRGF-MQGHVNRQEKE 433
Query: 251 ------------YVEEPVSDYVQAAVSTVLLIHD-----------------KEPPGDILV 281
YV E Y + V + ++ D +E G ILV
Sbjct: 434 EKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILV 493
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIS 341
FL G D+I LL + S +I+PL+S + Q QVF TP G RK+VI+
Sbjct: 494 FLPGWDNISTLHDLLMSQVMFK---SDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 342 TNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGK 401
TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA+A+QR GRAGRV+PG
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 402 CYRLYT-------EEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
CY LY ++Y +PE+ R+ L +Q+K L + I F PP
Sbjct: 611 CYHLYNGLRASLLDDY--------QLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPP 662
Query: 455 --EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITI 512
EA++ ++ L L LD +LT P G +A +P+EP I KMIL C + ++TI
Sbjct: 663 SNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 721
Query: 513 SAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
+A LS + +V G +K D + A DH+T +N ++G+ ++ + K++
Sbjct: 722 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 781
Query: 572 NYHAMVRNLIWML 584
+ + N + ML
Sbjct: 782 WEYFLSSNTLQML 794
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 275 bits (702), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 308/581 (53%), Gaps = 47/581 (8%)
Query: 17 DEEGGVVFLSSSLSSASSIGYG--YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGET 74
DEEG + L+ + Y Y + K+R+ LP++K + + + + + ++ G++
Sbjct: 28 DEEGVLACEDLELNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDS 87
Query: 75 GSGKTTQIPQYLKE----AGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKVGEEVGYT 130
GK++Q+PQ+ E + GG + CTQ + +A RVA+EM V +G EVGY
Sbjct: 88 KCGKSSQVPQWCAEYCLSIHYQHGG--VICTQAHKQTAVQLALRVADEMDVNIGHEVGYV 145
Query: 131 IRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKI 190
I FE+ + T +++ TD +L REMM +P L Y VI++D+ HERS++TD+LLGLLK +
Sbjct: 146 IPFENCCTTE-TILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDV 204
Query: 191 QRCRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIH 250
R +L+LI++ + + +S+++ VP ++ V + V++
Sbjct: 205 LLARPELKLIVNCSPLLTSKLSSYYGD------------VP-----VIEVRNK-HPVEVV 246
Query: 251 YVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGL 310
Y+ D ++ + + IH GD++VFL + DI+ T +L+ +E + L
Sbjct: 247 YLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVGDL 306
Query: 311 IILPLYSGLSRAEQEQVFSPTPRG-------KRKVVISTNIAETSLTLEGIVYVVDSGFS 363
+++PLY E+ +F P +R+VV++T+ E+ + + +V+D G
Sbjct: 307 VVIPLYP----KEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLE 362
Query: 364 KQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEM 423
+++ YNP +LV+ PIS++ A R G GK + LYTEE+ K++ EM
Sbjct: 363 RRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEM 422
Query: 424 QRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQ 483
Q +NL S V+ +K + I + D+ P PE++++ALE L L LD+D L S G
Sbjct: 423 QEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNL-SEFGII 481
Query: 484 VAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVS-GRGAQKELDEAKLRFAAA 542
++E PL+P +SK IL+S E C +E++TI+A+++ S ++ GA++ F
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHP 541
Query: 543 EGDHVTFLNIYKGFLQSCKSS-------HWCHKNFINYHAM 576
EGDH T +N+Y + + +S WCH F++ A+
Sbjct: 542 EGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSAL 582
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 308/613 (50%), Gaps = 82/613 (13%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLK----EAGWADG 94
Y +++ R++LP Y + ++ L+ H T+I GETG GKTTQ+ Q++ E G
Sbjct: 190 YIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSA 249
Query: 95 GRVIACTQPRRLAVQAVASRVAEEMGVKVGE--EVGYTIRFEDFTNKDLTAIKFLTDGVL 152
R++ CTQPRR++ +VA RVA E G GY IR + + +I + T G++
Sbjct: 250 CRIV-CTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 308
Query: 153 LREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRCRSDLRLIISSATIEAKSMS 212
L+ + D L+ S I++DE HER++ +D+L+ ++K + RSDL++I+ SAT+ A+ S
Sbjct: 309 LQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFS 368
Query: 213 AFFHARKG---------------RRGLEGVELVPRLEPAILSVEGRGFNVQIH------- 250
+F +E + VP + S RGF +Q H
Sbjct: 369 EYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPD-QKEHRSQFKRGF-MQGHVNRQEKE 426
Query: 251 ------------YVEEPVSDYVQAAVSTVLLIHD-----------------KEPPGDILV 281
Y++E + Y + V + ++ D +E G ILV
Sbjct: 427 EKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILV 486
Query: 282 FLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVIS 341
FL G D+I LL + S +I+PL+S + Q QVF TP G RK+VI+
Sbjct: 487 FLPGWDNISTLHDLLMSQVMFK---SDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 543
Query: 342 TNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGK 401
TNIAETS+T++ +VYV+D G K+ ++ ++I + +SKA+A+QR GRAGRV+PG
Sbjct: 544 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 603
Query: 402 CYRLYT-------EEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPASPPP 454
CY LY ++Y +PE+ R+ L +Q+K L + I F PP
Sbjct: 604 CYHLYNGLRASLLDDY--------QLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPP 655
Query: 455 --EAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIITI 512
EA++ +++ L L LD +LT P G +A +P+EP I KMIL C + ++TI
Sbjct: 656 SNEAVVLSIKHLMELSALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 714
Query: 513 SAVLSIQSIWVSGRGAQKELDEAKLRFAA-AEGDHVTFLNIYKGFLQSCKSSHWCHKNFI 571
+A LS + +V G +K D + A DH+T +N ++G+ ++ + K++
Sbjct: 715 AASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYC 774
Query: 572 NYHAMVRNLIWML 584
+ + N + ML
Sbjct: 775 WEYFLSSNTLQML 787
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 292/549 (53%), Gaps = 31/549 (5%)
Query: 39 YASIEKQRQRLPVYKYRTAILYLVETHATTIIV--GETGSGKTTQIPQYLKEAGWADGGR 96
Y + +QR+ LP++ R L +E+ T +++ G+ GSGK+TQIPQ+ E A G +
Sbjct: 32 YYELLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQ 91
Query: 97 V--IACTQPRRLAVQAVASRVAEEMGVKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLR 154
+ TQP LA ++ASRVA+EM + +G E+GY+I ED T + T ++F D + L+
Sbjct: 92 TGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPN-TMLRFCWDRLFLQ 150
Query: 155 EMMDDPLLTKYSVIMVDEAHERSISTDILLGLLK--KIQRCRSDLRLIISSATIEAKSMS 212
E+ +SV+++DEA ERS+++D+L GLL+ +++ D R+++ +
Sbjct: 151 EVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQ 210
Query: 213 AFFHARKGRRGLEGVELVPRLEPAILSVEGRGFNVQIHYVEEPVSDYVQAAVSTVL-LIH 271
AF+ G + VPR EP G + + Y + +D V+AA VL L
Sbjct: 211 AFW-------GNSPIVRVPR-EP--------GGDPTLAYKDTVPTDLVEAACQAVLELCQ 254
Query: 272 DKEPPGDILVFLTGQDDIDATIQLLTEEARTSKKNSSGLIILPLYSGLSRAEQEQVFSPT 331
+E PGD+LV+L +++I + L+ E T +LPL+ G ++A Q V+ T
Sbjct: 255 QEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQ-TVYEDT 313
Query: 332 PRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRA 391
RK+V++ +A+ S +L I +V+DSG + YNP E+ V+ PISK A R
Sbjct: 314 DVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARL 373
Query: 392 GRAGRVRPGKCYRLYTEEYFVKEIPAEGIPEMQRSNLVSCVIQLKALGIDNILGFDWPAS 451
RA PG C RLY++ E P P++ NL S V+ L I +
Sbjct: 374 LRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDR 433
Query: 452 PPPEAMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLEPMISKMILSSNELGCSEEIIT 511
P PEA++RALE L L L+DD +L+ G ++E PL P ++K +L+S E C +E++T
Sbjct: 434 PAPEALMRALEDLDYLAALNDDGELSD-LGVILSEFPLPPELAKALLASCEFNCVDEMLT 492
Query: 512 ISAVLSIQSIWVSGRGAQKELDEAKLRFA--AAEGDHVTFLNIYKGFLQSCKSSHWCHKN 569
++A+L+ + EA LR A A+GDH + + +Y+ F+QS WC
Sbjct: 493 LAAMLTAAPGFTR---PPLSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQAR 549
Query: 570 FINYHAMVR 578
+N+ ++ +
Sbjct: 550 GLNWESLCQ 558
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,243,489
Number of Sequences: 539616
Number of extensions: 8919359
Number of successful extensions: 28112
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 27318
Number of HSP's gapped (non-prelim): 309
length of query: 584
length of database: 191,569,459
effective HSP length: 123
effective length of query: 461
effective length of database: 125,196,691
effective search space: 57715674551
effective search space used: 57715674551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)